##gff-version 3
#!gff-spec-version 1.21
#!processor NCBI annotwriter
#!genome-build ASM1200v1
#!genome-build-accession NCBI_Assembly:GCF_000012005.1
##sequence-region NC_007606.1 1 4369232
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=300267
NC_007606.1	RefSeq	region	1	4369232	.	+	.	ID=id0;Dbxref=taxon:300267;Is_circular=true;Name=ANONYMOUS;gbkey=Src;genome=chromosome;mol_type=genomic DNA;serotype=1;strain=Sd197
NC_007606.1	RefSeq	gene	190	255	.	+	.	ID=gene0;Dbxref=GeneID:3799883;Name=thrL;Note=SDY0001;gbkey=Gene;gene=thrL;gene_biotype=protein_coding;locus_tag=SDY_0001
NC_007606.1	RefSeq	CDS	190	255	.	+	0	ID=cds0;Parent=gene0;Dbxref=Genbank:YP_401729.1,GeneID:3799883;Name=YP_401729.1;gbkey=CDS;gene=thrL;product=thr operon leader peptide;protein_id=YP_401729.1;transl_table=11
NC_007606.1	RefSeq	gene	336	2798	.	+	.	ID=gene1;Dbxref=GeneID:3796040;Name=thrA;Note=SDY0002;gbkey=Gene;gene=thrA;gene_biotype=protein_coding;locus_tag=SDY_0002
NC_007606.1	RefSeq	CDS	336	2798	.	+	0	ID=cds1;Parent=gene1;Dbxref=Genbank:YP_401730.1,GeneID:3796040;Name=YP_401730.1;Note=multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=thrA;product=bifunctional aspartokinase I/homoserine dehydrogenase I;protein_id=YP_401730.1;transl_table=11
NC_007606.1	RefSeq	gene	2800	3732	.	+	.	ID=gene2;Dbxref=GeneID:3796041;Name=thrB;Note=SDY0003;gbkey=Gene;gene=thrB;gene_biotype=protein_coding;locus_tag=SDY_0003
NC_007606.1	RefSeq	CDS	2800	3732	.	+	0	ID=cds2;Parent=gene2;Dbxref=Genbank:YP_401731.1,GeneID:3796041;Name=YP_401731.1;Note=catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate;gbkey=CDS;gene=thrB;product=homoserine kinase;protein_id=YP_401731.1;transl_table=11
NC_007606.1	RefSeq	gene	3733	5019	.	+	.	ID=gene3;Dbxref=GeneID:3796042;Name=thrC;Note=SDY0004;gbkey=Gene;gene=thrC;gene_biotype=protein_coding;locus_tag=SDY_0004
NC_007606.1	RefSeq	CDS	3733	5019	.	+	0	ID=cds3;Parent=gene3;Dbxref=Genbank:YP_401732.1,GeneID:3796042;Name=YP_401732.1;Note=catalyzes the formation of L-threonine from O-phospho-L-homoserine;gbkey=CDS;gene=thrC;product=threonine synthase;protein_id=YP_401732.1;transl_table=11
NC_007606.1	RefSeq	gene	5233	5529	.	+	.	ID=gene4;Dbxref=GeneID:3796043;Name=SDY_0005;Note=SDY0005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0005
NC_007606.1	RefSeq	CDS	5233	5529	.	+	0	ID=cds4;Parent=gene4;Dbxref=Genbank:YP_401733.1,GeneID:3796043;Name=YP_401733.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_401733.1;transl_table=11
NC_007606.1	RefSeq	gene	5682	6458	.	-	.	ID=gene5;Dbxref=GeneID:3796044;Name=yaaA;Note=SDY0006;gbkey=Gene;gene=yaaA;gene_biotype=protein_coding;locus_tag=SDY_0006
NC_007606.1	RefSeq	CDS	5682	6458	.	-	0	ID=cds5;Parent=gene5;Dbxref=Genbank:YP_401734.1,GeneID:3796044;Name=YP_401734.1;Note=Code: S%3B COG: COG3022;gbkey=CDS;gene=yaaA;product=hypothetical protein;protein_id=YP_401734.1;transl_table=11
NC_007606.1	RefSeq	gene	6528	7951	.	-	.	ID=gene6;Dbxref=GeneID:3796045;Name=yaaJ;Note=SDY0007;gbkey=Gene;gene=yaaJ;gene_biotype=pseudogene;locus_tag=SDY_0007;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	8230	9183	.	+	.	ID=gene7;Dbxref=GeneID:3796046;Name=talB;Note=SDY0008;gbkey=Gene;gene=talB;gene_biotype=protein_coding;locus_tag=SDY_0008
NC_007606.1	RefSeq	CDS	8230	9183	.	+	0	ID=cds6;Parent=gene7;Dbxref=Genbank:YP_401736.1,GeneID:3796046;Name=YP_401736.1;Note=Code: G%3B COG: COG0176;gbkey=CDS;gene=talB;product=transaldolase B;protein_id=YP_401736.1;transl_table=11
NC_007606.1	RefSeq	gene	9298	9885	.	+	.	ID=gene8;Dbxref=GeneID:3796047;Name=mogA;Note=SDY0009;gbkey=Gene;gene=mogA;gene_biotype=protein_coding;locus_tag=SDY_0009
NC_007606.1	RefSeq	CDS	9298	9885	.	+	0	ID=cds7;Parent=gene8;Dbxref=Genbank:YP_401737.1,GeneID:3796047;Name=YP_401737.1;Note=forms a trimer%3B related to eukaryotic protein gephyrin%3B functions during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mogA;product=molybdenum cofactor biosynthesis protein;protein_id=YP_401737.1;transl_table=11
NC_007606.1	RefSeq	gene	9920	10486	.	-	.	ID=gene9;Dbxref=GeneID:3796048;Name=yaaH;Note=SDY0010;gbkey=Gene;gene=yaaH;gene_biotype=protein_coding;locus_tag=SDY_0010
NC_007606.1	RefSeq	CDS	9920	10486	.	-	0	ID=cds8;Parent=gene9;Dbxref=Genbank:YP_401738.1,GeneID:3796048;Name=YP_401738.1;Note=Code: S%3B COG: COG1584;gbkey=CDS;gene=yaaH;product=hypothetical protein;protein_id=YP_401738.1;transl_table=11
NC_007606.1	RefSeq	gene	10635	11348	.	-	.	ID=gene10;Dbxref=GeneID:3796049;Name=SDY_0011;Note=SDY0011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0011
NC_007606.1	RefSeq	CDS	10635	11348	.	-	0	ID=cds9;Parent=gene10;Dbxref=Genbank:YP_401739.1,GeneID:3796049;Name=YP_401739.1;Note=Code: S%3B COG: COG4735;gbkey=CDS;product=hypothetical protein;protein_id=YP_401739.1;transl_table=11
NC_007606.1	RefSeq	gene	11374	11733	.	-	.	ID=gene11;Dbxref=GeneID:3796050;Name=yaaI;Note=SDY0012;gbkey=Gene;gene=yaaI;gene_biotype=protein_coding;locus_tag=SDY_0012
NC_007606.1	RefSeq	CDS	11374	11733	.	-	0	ID=cds10;Parent=gene11;Dbxref=Genbank:YP_401740.1,GeneID:3796050;Name=YP_401740.1;gbkey=CDS;gene=yaaI;product=hypothetical protein;protein_id=YP_401740.1;transl_table=11
NC_007606.1	RefSeq	gene	12155	14071	.	+	.	ID=gene12;Dbxref=GeneID:3796051;Name=dnaK;Note=SDY0013;gbkey=Gene;gene=dnaK;gene_biotype=protein_coding;locus_tag=SDY_0013
NC_007606.1	RefSeq	CDS	12155	14071	.	+	0	ID=cds11;Parent=gene12;Dbxref=Genbank:YP_401741.1,GeneID:3796051;Name=YP_401741.1;Note=heat shock protein 70%3B assists in folding of nascent polypeptide chains%3B refolding of misfolded proteins%3B utilizes ATPase activity to help fold%3B co-chaperones are DnaJ and GrpE%3B multiple copies in some bacteria;gbkey=CDS;gene=dnaK;product=molecular chaperone DnaK;protein_id=YP_401741.1;transl_table=11
NC_007606.1	RefSeq	gene	14160	15290	.	+	.	ID=gene13;Dbxref=GeneID:3796052;Name=dnaJ;Note=SDY0014;gbkey=Gene;gene=dnaJ;gene_biotype=protein_coding;locus_tag=SDY_0014
NC_007606.1	RefSeq	CDS	14160	15290	.	+	0	ID=cds12;Parent=gene13;Dbxref=Genbank:YP_401742.1,GeneID:3796052;Name=YP_401742.1;Note=''chaperone Hsp40%3B co-chaperone with DnaK%3B Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins%2C also in an autonomous%2C dnaK-independent fashion'';gbkey=CDS;gene=dnaJ;product=molecular chaperone DnaJ;protein_id=YP_401742.1;transl_table=11
NC_007606.1	RefSeq	gene	15394	15603	.	-	.	ID=gene14;Dbxref=GeneID:3796053;Name=gef;Note=SDY0015;gbkey=Gene;gene=gef;gene_biotype=protein_coding;locus_tag=SDY_0015
NC_007606.1	RefSeq	CDS	15394	15603	.	-	0	ID=cds13;Parent=gene14;Dbxref=Genbank:YP_401743.1,GeneID:3796053;Name=YP_401743.1;gbkey=CDS;gene=gef;product=Gef protein;protein_id=YP_401743.1;transl_table=11
NC_007606.1	RefSeq	region	15852	16615	.	-	.	ID=id1;gbkey=mobile_element
NC_007606.1	RefSeq	gene	16286	16558	.	-	.	ID=gene15;Dbxref=GeneID:18262935;Name=SDY_0017a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0017a
NC_007606.1	RefSeq	CDS	16286	16558	.	-	0	ID=cds14;Parent=gene15;Dbxref=Genbank:YP_009000618.1,GeneID:18262935;Name=YP_009000618.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000618.1;transl_table=11
NC_007606.1	RefSeq	gene	16905	18071	.	+	.	ID=gene16;Dbxref=GeneID:3796056;Name=nhaA;Note=SDY0018;gbkey=Gene;gene=nhaA;gene_biotype=protein_coding;locus_tag=SDY_0018
NC_007606.1	RefSeq	CDS	16905	18071	.	+	0	ID=cds15;Parent=gene16;Dbxref=Genbank:YP_401746.1,GeneID:3796056;Name=YP_401746.1;Note=exports sodium by using the electrochemical proton gradient to allow protons into the cell%3B functions in adaptation to high salinity and alkaline pH%3B activity increases at higher pH%3B downregulated at acidic pH;gbkey=CDS;gene=nhaA;product=pH-dependent sodium/proton antiporter;protein_id=YP_401746.1;transl_table=11
NC_007606.1	RefSeq	gene	18131	19036	.	+	.	ID=gene17;Dbxref=GeneID:3796057;Name=nhaR;Note=SDY0019;gbkey=Gene;gene=nhaR;gene_biotype=protein_coding;locus_tag=SDY_0019
NC_007606.1	RefSeq	CDS	18131	19036	.	+	0	ID=cds16;Parent=gene17;Dbxref=Genbank:YP_401747.1,GeneID:3796057;Name=YP_401747.1;Note=Na+/H+ antiporter regulatory protein%3B activates the genes nhaA and osmC;gbkey=CDS;gene=nhaR;product=transcriptional activator NhaR;protein_id=YP_401747.1;transl_table=11
NC_007606.1	RefSeq	gene	19074	19601	.	-	.	ID=gene18;Dbxref=GeneID:3796058;Name=SDY_0020;Note=SDY0020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0020
NC_007606.1	RefSeq	CDS	19074	19601	.	-	0	ID=cds17;Parent=gene18;Dbxref=Genbank:YP_401748.1,GeneID:3796058;Name=YP_401748.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_401748.1;transl_table=11
NC_007606.1	RefSeq	region	19655	20420	.	+	.	ID=id2;gbkey=mobile_element
NC_007606.1	RefSeq	gene	19712	19984	.	+	.	ID=gene19;Dbxref=GeneID:18262936;Name=SDY_0022a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0022a
NC_007606.1	RefSeq	CDS	19712	19984	.	+	0	ID=cds18;Parent=gene19;Dbxref=Genbank:YP_009000619.1,GeneID:18262936;Name=YP_009000619.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000619.1;transl_table=11
NC_007606.1	RefSeq	gene	20011	20406	.	+	.	ID=gene20;Dbxref=GeneID:3797315;Name=SDY_0022;Note=SDY0022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0022
NC_007606.1	RefSeq	CDS	20011	20406	.	+	0	ID=cds19;Parent=gene20;Dbxref=Genbank:YP_401750.1,GeneID:3797315;Name=YP_401750.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_401750.1;transl_table=11
NC_007606.1	RefSeq	region	20497	21264	.	-	.	ID=id3;gbkey=mobile_element
NC_007606.1	RefSeq	gene	20512	20889	.	-	.	ID=gene21;Dbxref=GeneID:3797316;Name=insB;Note=SDY0023;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0023
NC_007606.1	RefSeq	CDS	20512	20889	.	-	0	ID=cds20;Parent=gene21;Dbxref=Genbank:YP_401751.1,GeneID:3797316;Name=YP_401751.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion sequence element IS1 transposase;protein_id=YP_401751.1;transl_table=11
NC_007606.1	RefSeq	gene	20934	21209	.	-	.	ID=gene22;Dbxref=GeneID:3797317;Name=insA;Note=SDY0024;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0024
NC_007606.1	RefSeq	CDS	20934	21209	.	-	0	ID=cds21;Parent=gene22;Dbxref=Genbank:YP_401752.1,GeneID:3797317;Name=YP_401752.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_401752.1;transl_table=11
NC_007606.1	RefSeq	gene	21788	24385	.	+	.	ID=gene23;Dbxref=GeneID:3797318;Name=acnB;Note=SDY0025;gbkey=Gene;gene=acnB;gene_biotype=protein_coding;locus_tag=SDY_0025
NC_007606.1	RefSeq	CDS	21788	24385	.	+	0	ID=cds22;Parent=gene23;Dbxref=Genbank:YP_401753.1,GeneID:3797318;Name=YP_401753.1;Note=catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate;gbkey=CDS;gene=acnB;product=bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase;protein_id=YP_401753.1;transl_table=11
NC_007606.1	RefSeq	gene	24560	24922	.	+	.	ID=gene24;Dbxref=GeneID:3797319;Name=yacL;Note=SDY0026;gbkey=Gene;gene=yacL;gene_biotype=protein_coding;locus_tag=SDY_0026
NC_007606.1	RefSeq	CDS	24560	24922	.	+	0	ID=cds23;Parent=gene24;Dbxref=Genbank:YP_401754.2,GeneID:3797319;Name=YP_401754.2;Note=Code: S%3B COG: COG3112;gbkey=CDS;gene=yacL;product=hypothetical protein;protein_id=YP_401754.2;transl_table=11
NC_007606.1	RefSeq	gene	24960	25754	.	-	.	ID=gene25;Dbxref=GeneID:3797320;Name=speD;Note=SDY0027;gbkey=Gene;gene=speD;gene_biotype=protein_coding;locus_tag=SDY_0027
NC_007606.1	RefSeq	CDS	24960	25754	.	-	0	ID=cds24;Parent=gene25;Dbxref=Genbank:YP_401755.1,GeneID:3797320;Name=YP_401755.1;Note=S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine;gbkey=CDS;gene=speD;product=S-adenosylmethionine decarboxylase;protein_id=YP_401755.1;transl_table=11
NC_007606.1	RefSeq	gene	25770	26636	.	-	.	ID=gene26;Dbxref=GeneID:3797321;Name=speE;Note=SDY0028;gbkey=Gene;gene=speE;gene_biotype=protein_coding;locus_tag=SDY_0028
NC_007606.1	RefSeq	CDS	25770	26636	.	-	0	ID=cds25;Parent=gene26;Dbxref=Genbank:YP_401756.1,GeneID:3797321;Name=YP_401756.1;Note=catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine;gbkey=CDS;gene=speE;product=spermidine synthase;protein_id=YP_401756.1;transl_table=11
NC_007606.1	RefSeq	gene	27255	28805	.	+	.	ID=gene27;Dbxref=GeneID:3797323;Name=yacK;Note=SDY0030;gbkey=Gene;gene=yacK;gene_biotype=protein_coding;locus_tag=SDY_0030
NC_007606.1	RefSeq	CDS	27255	28805	.	+	0	ID=cds26;Parent=gene27;Dbxref=Genbank:YP_401758.1,GeneID:3797323;Name=YP_401758.1;Note=laccase%3B copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification;gbkey=CDS;gene=yacK;product=multicopper oxidase;protein_id=YP_401758.1;transl_table=11
NC_007606.1	RefSeq	gene	28852	31853	.	-	.	ID=gene28;Dbxref=GeneID:3797326;Name=gcd;Note=SDY0033%3B interrupted by IS1 insertion%3B original product: glucose dehydrogenase;gbkey=Gene;gene=gcd;gene_biotype=pseudogene;locus_tag=SDY_0033;pseudo=true
NC_007606.1	RefSeq	region	29744	30511	.	+	.	ID=id4;gbkey=mobile_element;gene=gcd
NC_007606.1	RefSeq	gene	29799	30074	.	+	.	ID=gene29;Dbxref=GeneID:3797324;Name=insA;Note=SDY0031;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0031
NC_007606.1	RefSeq	CDS	29799	30074	.	+	0	ID=cds27;Parent=gene29;Dbxref=Genbank:YP_401759.1,GeneID:3797324;Name=YP_401759.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_401759.1;transl_table=11
NC_007606.1	RefSeq	gene	30119	30496	.	+	.	ID=gene30;Dbxref=GeneID:3797325;Name=insB;Note=SDY0032;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0032
NC_007606.1	RefSeq	CDS	30119	30496	.	+	0	ID=cds28;Parent=gene30;Dbxref=Genbank:YP_401760.1,GeneID:3797325;Name=YP_401760.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_401760.1;transl_table=11
NC_007606.1	RefSeq	gene	32224	32760	.	+	.	ID=gene31;Dbxref=GeneID:3797327;Name=hpt;Note=SDY0034;gbkey=Gene;gene=hpt;gene_biotype=protein_coding;locus_tag=SDY_0034
NC_007606.1	RefSeq	CDS	32224	32760	.	+	0	ID=cds29;Parent=gene31;Dbxref=Genbank:YP_401761.2,GeneID:3797327;Name=YP_401761.2;Note=Code: F%3B COG: COG0634;gbkey=CDS;gene=hpt;product=hypoxanthine phosphoribosyltransferase;protein_id=YP_401761.2;transl_table=11
NC_007606.1	RefSeq	gene	32801	33463	.	-	.	ID=gene32;Dbxref=GeneID:3797328;Name=yadF;Note=SDY0035;gbkey=Gene;gene=yadF;gene_biotype=protein_coding;locus_tag=SDY_0035
NC_007606.1	RefSeq	CDS	32801	33463	.	-	0	ID=cds30;Parent=gene32;Dbxref=Genbank:YP_401762.1,GeneID:3797328;Name=YP_401762.1;Note=catalyzes the interconversion of bicarbonate and carbon dioxide;gbkey=CDS;gene=yadF;product=carbonic anhydrase;protein_id=YP_401762.1;transl_table=11
NC_007606.1	RefSeq	gene	33572	34498	.	+	.	ID=gene33;Dbxref=GeneID:3797329;Name=yadG;Note=SDY0036;gbkey=Gene;gene=yadG;gene_biotype=protein_coding;locus_tag=SDY_0036
NC_007606.1	RefSeq	CDS	33572	34498	.	+	0	ID=cds31;Parent=gene33;Dbxref=Genbank:YP_401763.1,GeneID:3797329;Name=YP_401763.1;Note=Code: V%3B COG: COG1131;gbkey=CDS;gene=yadG;product=ATPase;protein_id=YP_401763.1;transl_table=11
NC_007606.1	RefSeq	gene	34495	35265	.	+	.	ID=gene34;Dbxref=GeneID:3797330;Name=yadH;Note=SDY0037;gbkey=Gene;gene=yadH;gene_biotype=protein_coding;locus_tag=SDY_0037
NC_007606.1	RefSeq	CDS	34495	35265	.	+	0	ID=cds32;Parent=gene34;Dbxref=Genbank:YP_401764.1,GeneID:3797330;Name=YP_401764.1;Note=Code: V%3B COG: COG0842;gbkey=CDS;gene=yadH;product=hypothetical protein;protein_id=YP_401764.1;transl_table=11
NC_007606.1	RefSeq	gene	35370	35810	.	+	.	ID=gene35;Dbxref=GeneID:3797331;Name=yadI;Note=SDY0038;gbkey=Gene;gene=yadI;gene_biotype=protein_coding;locus_tag=SDY_0038
NC_007606.1	RefSeq	CDS	35370	35810	.	+	0	ID=cds33;Parent=gene35;Dbxref=Genbank:YP_401765.1,GeneID:3797331;Name=YP_401765.1;Note=Code: G%3B COG: COG2893;gbkey=CDS;gene=yadI;product=PTS system transporter subunit IIB;protein_id=YP_401765.1;transl_table=11
NC_007606.1	RefSeq	gene	35874	37104	.	+	.	ID=gene36;Dbxref=GeneID:3797332;Name=SDY_0039;Note=SDY0039;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0039;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	37108	37488	.	-	.	ID=gene37;Dbxref=GeneID:3799806;Name=panD;Note=SDY0041;gbkey=Gene;gene=panD;gene_biotype=protein_coding;locus_tag=SDY_0041
NC_007606.1	RefSeq	CDS	37108	37488	.	-	0	ID=cds34;Parent=gene37;Dbxref=Genbank:YP_401768.1,GeneID:3799806;Name=YP_401768.1;Note=Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5);gbkey=CDS;gene=panD;product=aspartate alpha-decarboxylase;protein_id=YP_401768.1;transl_table=11
NC_007606.1	RefSeq	gene	37762	38562	.	+	.	ID=gene38;Dbxref=GeneID:3799807;Name=yadD;Note=SDY0042;gbkey=Gene;gene=yadD;gene_biotype=protein_coding;locus_tag=SDY_0042
NC_007606.1	RefSeq	CDS	37762	38562	.	+	0	ID=cds35;Parent=gene38;Dbxref=Genbank:YP_401769.1,GeneID:3799807;Name=YP_401769.1;Note=Code: S%3B COG: COG5464;gbkey=CDS;gene=yadD;product=hypothetical protein;protein_id=YP_401769.1;transl_table=11
NC_007606.1	RefSeq	region	38536	39303	.	+	.	ID=id5;gbkey=mobile_element;gene=yadD
NC_007606.1	RefSeq	gene	38591	38866	.	+	.	ID=gene39;Dbxref=GeneID:3799808;Name=insA;Note=SDY0043;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0043
NC_007606.1	RefSeq	CDS	38591	38866	.	+	0	ID=cds36;Parent=gene39;Dbxref=Genbank:YP_401770.1,GeneID:3799808;Name=YP_401770.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_401770.1;transl_table=11
NC_007606.1	RefSeq	gene	38911	39288	.	+	.	ID=gene40;Dbxref=GeneID:3799809;Name=insB;Note=SDY0044;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0044
NC_007606.1	RefSeq	CDS	38911	39288	.	+	0	ID=cds37;Parent=gene40;Dbxref=Genbank:YP_401771.1,GeneID:3799809;Name=YP_401771.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_401771.1;transl_table=11
NC_007606.1	RefSeq	gene	39604	39867	.	-	.	ID=gene41;Dbxref=GeneID:3799810;Name=rpsT;Note=SDY0045;gbkey=Gene;gene=rpsT;gene_biotype=protein_coding;locus_tag=SDY_0045
NC_007606.1	RefSeq	CDS	39604	39867	.	-	0	ID=cds38;Parent=gene41;Dbxref=Genbank:YP_401772.1,GeneID:3799810;Name=YP_401772.1;Note=binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase;gbkey=CDS;gene=rpsT;product=30S ribosomal protein S20;protein_id=YP_401772.1;transl_table=11
NC_007606.1	RefSeq	gene	39970	40188	.	+	.	ID=gene42;Dbxref=GeneID:3799811;Name=SDY_0046;Note=SDY0046;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0046
NC_007606.1	RefSeq	CDS	39970	40188	.	+	0	ID=cds39;Parent=gene42;Dbxref=Genbank:YP_401773.1,GeneID:3799811;Name=YP_401773.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_401773.1;transl_table=11
NC_007606.1	RefSeq	gene	40196	41137	.	+	.	ID=gene43;Dbxref=GeneID:3799812;Name=ribF;Note=SDY0047;gbkey=Gene;gene=ribF;gene_biotype=protein_coding;gene_synonym=ribC;locus_tag=SDY_0047
NC_007606.1	RefSeq	CDS	40196	41137	.	+	0	ID=cds40;Parent=gene43;Dbxref=Genbank:YP_401774.1,GeneID:3799812;Name=YP_401774.1;Note=catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN%3B in Bacillus the ribC gene has both flavokinase and FAD synthetase activities;gbkey=CDS;gene=ribF;product=bifunctional riboflavin kinase/FMN adenylyltransferase;protein_id=YP_401774.1;transl_table=11
NC_007606.1	RefSeq	gene	41180	43996	.	+	.	ID=gene44;Dbxref=GeneID:3799813;Name=ileS;Note=SDY0048;gbkey=Gene;gene=ileS;gene_biotype=protein_coding;locus_tag=SDY_0048
NC_007606.1	RefSeq	CDS	41180	43996	.	+	0	ID=cds41;Parent=gene44;Dbxref=Genbank:YP_401775.1,GeneID:3799813;Name=YP_401775.1;Note=''IleRS%3B catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile)%3B since isoleucine and other amino acids such as valine are similar%2C there are additional editing function in this enzyme%3B one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile)%3B there are two active sites%2C one for aminoacylation and one for editing%3B class-I aminoacyl-tRNA synthetase type 1 subfamily%3B some organisms carry two different copies of this enzyme'';gbkey=CDS;gene=ileS;product=isoleucyl-tRNA synthetase;protein_id=YP_401775.1;transl_table=11
NC_007606.1	RefSeq	gene	43996	44490	.	+	.	ID=gene45;Dbxref=GeneID:3799814;Name=lspA;Note=SDY0049;gbkey=Gene;gene=lspA;gene_biotype=protein_coding;locus_tag=SDY_0049
NC_007606.1	RefSeq	CDS	43996	44490	.	+	0	ID=cds42;Parent=gene45;Dbxref=Genbank:YP_401776.1,GeneID:3799814;Name=YP_401776.1;Note=lipoprotein signal peptidase%3B integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis;gbkey=CDS;gene=lspA;product=lipoprotein signal peptidase;protein_id=YP_401776.1;transl_table=11
NC_007606.1	RefSeq	gene	44578	45027	.	+	.	ID=gene46;Dbxref=GeneID:3799815;Name=slpA;Note=SDY0050;gbkey=Gene;gene=slpA;gene_biotype=protein_coding;locus_tag=SDY_0050
NC_007606.1	RefSeq	CDS	44578	45027	.	+	0	ID=cds43;Parent=gene46;Dbxref=Genbank:YP_401777.1,GeneID:3799815;Name=YP_401777.1;Note=Code: O%3B COG: COG1047;gbkey=CDS;gene=slpA;product=FKBP-type peptidylprolyl isomerase;protein_id=YP_401777.1;transl_table=11
NC_007606.1	RefSeq	gene	45029	45979	.	+	.	ID=gene47;Dbxref=GeneID:3799816;Name=ispH;Note=SDY0051;gbkey=Gene;gene=ispH;gene_biotype=protein_coding;gene_synonym=lytB;locus_tag=SDY_0051
NC_007606.1	RefSeq	CDS	45029	45979	.	+	0	ID=cds44;Parent=gene47;Dbxref=Genbank:YP_401778.1,GeneID:3799816;Name=YP_401778.1;Note=catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP)%3B functions in the nonmevalonate isoprenoid biosynthesis pathway;gbkey=CDS;gene=ispH;product=4-hydroxy-3-methylbut-2-enyl diphosphate reductase;protein_id=YP_401778.1;transl_table=11
NC_007606.1	RefSeq	gene	46045	46959	.	+	.	ID=gene48;Dbxref=GeneID:3799817;Name=yaaF;Note=SDY0052;gbkey=Gene;gene=yaaF;gene_biotype=protein_coding;locus_tag=SDY_0052
NC_007606.1	RefSeq	CDS	46045	46959	.	+	0	ID=cds45;Parent=gene48;Dbxref=Genbank:YP_401779.1,GeneID:3799817;Name=YP_401779.1;Note=catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides;gbkey=CDS;gene=yaaF;product=ribonucleoside hydrolase RihC;protein_id=YP_401779.1;transl_table=11
NC_007606.1	RefSeq	gene	47126	47947	.	+	.	ID=gene49;Dbxref=GeneID:3799818;Name=dapB;Note=SDY0053;gbkey=Gene;gene=dapB;gene_biotype=protein_coding;locus_tag=SDY_0053
NC_007606.1	RefSeq	CDS	47126	47947	.	+	0	ID=cds46;Parent=gene49;Dbxref=Genbank:YP_401780.1,GeneID:3799818;Name=YP_401780.1;Note=''catalyzes the reduction of 2%2C3-dihydrodipicolinate to 2%2C3%2C4%2C5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis'';gbkey=CDS;gene=dapB;product=dihydrodipicolinate reductase;protein_id=YP_401780.1;transl_table=11
NC_007606.1	RefSeq	gene	48405	49553	.	+	.	ID=gene50;Dbxref=GeneID:3799819;Name=carA;Note=SDY0054;gbkey=Gene;gene=carA;gene_biotype=protein_coding;locus_tag=SDY_0054
NC_007606.1	RefSeq	CDS	48405	49553	.	+	0	ID=cds47;Parent=gene50;Dbxref=Genbank:YP_401781.1,GeneID:3799819;Name=YP_401781.1;Note=catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways%3B forms an octamer composed of four CarAB dimers;gbkey=CDS;gene=carA;product=carbamoyl phosphate synthase small subunit;protein_id=YP_401781.1;transl_table=11
NC_007606.1	RefSeq	gene	49571	52792	.	+	.	ID=gene51;Dbxref=GeneID:3799820;Name=carB;Note=SDY0055;gbkey=Gene;gene=carB;gene_biotype=protein_coding;locus_tag=SDY_0055
NC_007606.1	RefSeq	CDS	49571	52792	.	+	0	ID=cds48;Parent=gene51;Dbxref=Genbank:YP_401782.1,GeneID:3799820;Name=YP_401782.1;Note=four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate%3B CarB is responsible for the amidotransferase activity;gbkey=CDS;gene=carB;product=carbamoyl phosphate synthase large subunit;protein_id=YP_401782.1;transl_table=11
NC_007606.1	RefSeq	gene	53053	53448	.	+	.	ID=gene52;Dbxref=GeneID:3799821;Name=caiF;Note=SDY0056;gbkey=Gene;gene=caiF;gene_biotype=pseudogene;locus_tag=SDY_0056;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	53534	54145	.	-	.	ID=gene53;Dbxref=GeneID:3799822;Name=caiE;Note=SDY0057;gbkey=Gene;gene=caiE;gene_biotype=protein_coding;locus_tag=SDY_0057
NC_007606.1	RefSeq	CDS	53534	54145	.	-	0	ID=cds49;Parent=gene53;Dbxref=Genbank:YP_401784.1,GeneID:3799822;Name=YP_401784.1;Note=involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities;gbkey=CDS;gene=caiE;product=carnitine operon protein CaiE;protein_id=YP_401784.1;transl_table=11
NC_007606.1	RefSeq	gene	54130	55023	.	-	.	ID=gene54;Dbxref=GeneID:3799823;Name=caiD;Note=SDY0058;gbkey=Gene;gene=caiD;gene_biotype=protein_coding;locus_tag=SDY_0058
NC_007606.1	RefSeq	CDS	54130	55023	.	-	0	ID=cds50;Parent=gene54;Dbxref=Genbank:YP_401785.1,GeneID:3799823;Name=YP_401785.1;Note=catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA;gbkey=CDS;gene=caiD;product=carnitinyl-CoA dehydratase;protein_id=YP_401785.1;transl_table=11
NC_007606.1	RefSeq	gene	55024	56592	.	-	.	ID=gene55;Dbxref=GeneID:3799824;Name=caiC;Note=SDY0059;gbkey=Gene;gene=caiC;gene_biotype=protein_coding;locus_tag=SDY_0059
NC_007606.1	RefSeq	CDS	55024	56592	.	-	0	ID=cds51;Parent=gene55;Dbxref=Genbank:YP_401786.1,GeneID:3799824;Name=YP_401786.1;Note=Code: IQ%3B COG: COG0318;gbkey=CDS;gene=caiC;product=crotonobetaine/carnitine-CoA ligase;protein_id=YP_401786.1;transl_table=11
NC_007606.1	RefSeq	gene	56651	57868	.	-	.	ID=gene56;Dbxref=GeneID:3798940;Name=caiB;Note=SDY0060;gbkey=Gene;gene=caiB;gene_biotype=protein_coding;locus_tag=SDY_0060
NC_007606.1	RefSeq	CDS	56651	57868	.	-	0	ID=cds52;Parent=gene56;Dbxref=Genbank:YP_401787.1,GeneID:3798940;Name=YP_401787.1;Note=''catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA%2C also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine'';gbkey=CDS;gene=caiB;product=crotonobetainyl-CoA:carnitine CoA-transferase;protein_id=YP_401787.1;transl_table=11
NC_007606.1	RefSeq	gene	57997	59139	.	-	.	ID=gene57;Dbxref=GeneID:3798941;Name=caiA;Note=SDY0061;gbkey=Gene;gene=caiA;gene_biotype=protein_coding;locus_tag=SDY_0061
NC_007606.1	RefSeq	CDS	57997	59139	.	-	0	ID=cds53;Parent=gene57;Dbxref=Genbank:YP_401788.1,GeneID:3798941;Name=YP_401788.1;Note=catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA;gbkey=CDS;gene=caiA;product=crotonobetainyl-CoA dehydrogenase;protein_id=YP_401788.1;transl_table=11
NC_007606.1	RefSeq	gene	59170	60684	.	-	.	ID=gene58;Dbxref=GeneID:3798942;Name=caiT;Note=SDY0062;gbkey=Gene;gene=caiT;gene_biotype=protein_coding;locus_tag=SDY_0062
NC_007606.1	RefSeq	CDS	59170	60684	.	-	0	ID=cds54;Parent=gene58;Dbxref=Genbank:YP_401789.1,GeneID:3798942;Name=YP_401789.1;Note=catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism;gbkey=CDS;gene=caiT;product=L-carnitine/gamma-butyrobetaine antiporter;protein_id=YP_401789.1;transl_table=11
NC_007606.1	RefSeq	gene	61156	61926	.	+	.	ID=gene59;Dbxref=GeneID:3798943;Name=fixA;Note=SDY0063;gbkey=Gene;gene=fixA;gene_biotype=protein_coding;locus_tag=SDY_0063
NC_007606.1	RefSeq	CDS	61156	61926	.	+	0	ID=cds55;Parent=gene59;Dbxref=Genbank:YP_401790.2,GeneID:3798943;Name=YP_401790.2;Note=''required for anaerobic carnitine reduction%2C may act to transfer electrons to crotonobetaine reductase'';gbkey=CDS;gene=fixA;product=electron transfer flavoprotein FixA;protein_id=YP_401790.2;transl_table=11
NC_007606.1	RefSeq	gene	61941	62882	.	+	.	ID=gene60;Dbxref=GeneID:3798944;Name=fixB;Note=SDY0064;gbkey=Gene;gene=fixB;gene_biotype=protein_coding;locus_tag=SDY_0064
NC_007606.1	RefSeq	CDS	61941	62882	.	+	0	ID=cds56;Parent=gene60;Dbxref=Genbank:YP_401791.1,GeneID:3798944;Name=YP_401791.1;Note=involved in electron transfer during carnitine metabolism;gbkey=CDS;gene=fixB;product=electron transfer flavoprotein FixB;protein_id=YP_401791.1;transl_table=11
NC_007606.1	RefSeq	gene	62933	64218	.	+	.	ID=gene61;Dbxref=GeneID:3798945;Name=fixC;Note=SDY0065;gbkey=Gene;gene=fixC;gene_biotype=pseudogene;locus_tag=SDY_0065;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	64215	64502	.	+	.	ID=gene62;Dbxref=GeneID:3798946;Name=fixX;Note=SDY0066;gbkey=Gene;gene=fixX;gene_biotype=protein_coding;locus_tag=SDY_0066;pseudogene=unknown
NC_007606.1	RefSeq	CDS	64215	64502	.	+	0	ID=cds57;Parent=gene62;Dbxref=Genbank:YP_401793.1,GeneID:3798946;Name=YP_401793.1;Note=Code: C%3B COG: COG2440;gbkey=CDS;gene=fixX;product=ferredoxin;protein_id=YP_401793.1;transl_table=11
NC_007606.1	RefSeq	gene	64560	65891	.	+	.	ID=gene63;Dbxref=GeneID:3798947;Name=yaaU;Note=SDY0067;gbkey=Gene;gene=yaaU;gene_biotype=pseudogene;locus_tag=SDY_0067;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	66002	66532	.	+	.	ID=gene64;Dbxref=GeneID:3798949;Name=yabF;Note=SDY0069;gbkey=Gene;gene=yabF;gene_biotype=protein_coding;locus_tag=SDY_0069
NC_007606.1	RefSeq	CDS	66002	66532	.	+	0	ID=cds58;Parent=gene64;Dbxref=Genbank:YP_401796.1,GeneID:3798949;Name=YP_401796.1;Note=''Required for full activity of KefC%2C a potassium-proton antiporter'';gbkey=CDS;gene=yabF;product=glutathione-regulated potassium-efflux system ancillary protein KefF;protein_id=YP_401796.1;transl_table=11
NC_007606.1	RefSeq	gene	66525	68192	.	+	.	ID=gene65;Dbxref=GeneID:3798950;Name=kefC;Note=SDY0070;gbkey=Gene;gene=kefC;gene_biotype=protein_coding;locus_tag=SDY_0070
NC_007606.1	RefSeq	CDS	66525	68192	.	+	0	ID=cds59;Parent=gene65;Dbxref=Genbank:YP_401797.1,GeneID:3798950;Name=YP_401797.1;Note=Code: P%3B COG: COG1226;gbkey=CDS;gene=kefC;product=K+ efflux antiporter%2C glutathione-regulated;protein_id=YP_401797.1;transl_table=11
NC_007606.1	RefSeq	gene	68384	68863	.	+	.	ID=gene66;Dbxref=GeneID:3798951;Name=folA;Note=SDY0071;gbkey=Gene;gene=folA;gene_biotype=protein_coding;locus_tag=SDY_0071
NC_007606.1	RefSeq	CDS	68384	68863	.	+	0	ID=cds60;Parent=gene66;Dbxref=Genbank:YP_401798.1,GeneID:3798951;Name=YP_401798.1;Note=catalyzes the reduction of dihydrofolate to tetrahydrofolate;gbkey=CDS;gene=folA;product=dihydrofolate reductase;protein_id=YP_401798.1;transl_table=11
NC_007606.1	RefSeq	gene	68949	69182	.	+	.	ID=gene67;Dbxref=GeneID:3798952;Name=SDY_0072;Note=SDY0072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0072
NC_007606.1	RefSeq	CDS	68949	69182	.	+	0	ID=cds61;Parent=gene67;Dbxref=Genbank:YP_401799.1,GeneID:3798952;Name=YP_401799.1;Note=Code: R%3B COG: COG5302;gbkey=CDS;product=antitoxin of gyrase inhibiting toxin-antitoxin system;protein_id=YP_401799.1;transl_table=11
NC_007606.1	RefSeq	gene	69185	69499	.	+	.	ID=gene68;Dbxref=GeneID:3798953;Name=SDY_0073;Note=SDY0073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0073
NC_007606.1	RefSeq	CDS	69185	69499	.	+	0	ID=cds62;Parent=gene68;Dbxref=Genbank:YP_401800.1,GeneID:3798953;Name=YP_401800.1;gbkey=CDS;product=toxin of gyrase inhibiting toxin-antitoxin system;protein_id=YP_401800.1;transl_table=11
NC_007606.1	RefSeq	gene	69496	70344	.	-	.	ID=gene69;Dbxref=GeneID:3798954;Name=apaH;Note=SDY0074;gbkey=Gene;gene=apaH;gene_biotype=protein_coding;locus_tag=SDY_0074
NC_007606.1	RefSeq	CDS	69496	70344	.	-	0	ID=cds63;Parent=gene69;Dbxref=Genbank:YP_401801.1,GeneID:3798954;Name=YP_401801.1;Note=''hydrolyzes P(1)%2CP(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP'';gbkey=CDS;gene=apaH;product=diadenosine tetraphosphatase;protein_id=YP_401801.1;transl_table=11
NC_007606.1	RefSeq	gene	70351	70728	.	-	.	ID=gene70;Dbxref=GeneID:3798955;Name=apaG;Note=SDY0075;gbkey=Gene;gene=apaG;gene_biotype=protein_coding;locus_tag=SDY_0075
NC_007606.1	RefSeq	CDS	70351	70728	.	-	0	ID=cds64;Parent=gene70;Dbxref=Genbank:YP_401802.1,GeneID:3798955;Name=YP_401802.1;Note=protein associated with Co2+ and Mg2+ efflux;gbkey=CDS;gene=apaG;product=ApaG protein;protein_id=YP_401802.1;transl_table=11
NC_007606.1	RefSeq	gene	70731	71552	.	-	.	ID=gene71;Dbxref=GeneID:3798956;Name=ksgA;Note=SDY0076;gbkey=Gene;gene=ksgA;gene_biotype=protein_coding;locus_tag=SDY_0076
NC_007606.1	RefSeq	CDS	70731	71552	.	-	0	ID=cds65;Parent=gene71;Dbxref=Genbank:YP_401803.1,GeneID:3798956;Name=YP_401803.1;Note=catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA%3B mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin;gbkey=CDS;gene=ksgA;product=dimethyladenosine transferase;protein_id=YP_401803.1;transl_table=11
NC_007606.1	RefSeq	gene	71549	72538	.	-	.	ID=gene72;Dbxref=GeneID:3798957;Name=pdxA;Note=SDY0077;gbkey=Gene;gene=pdxA;gene_biotype=protein_coding;locus_tag=SDY_0077
NC_007606.1	RefSeq	CDS	71549	72538	.	-	0	ID=cds66;Parent=gene72;Dbxref=Genbank:YP_401804.1,GeneID:3798957;Name=YP_401804.1;Note=catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate);gbkey=CDS;gene=pdxA;product=4-hydroxythreonine-4-phosphate dehydrogenase;protein_id=YP_401804.1;transl_table=11
NC_007606.1	RefSeq	gene	72538	73824	.	-	.	ID=gene73;Dbxref=GeneID:3798958;Name=surA;Note=SDY0078;gbkey=Gene;gene=surA;gene_biotype=protein_coding;locus_tag=SDY_0078
NC_007606.1	RefSeq	CDS	72538	73824	.	-	0	ID=cds67;Parent=gene73;Dbxref=Genbank:YP_401805.1,GeneID:3798958;Name=YP_401805.1;Note=''Chaperone involved in the folding of extracytoplasmic proteins%2C especially OmpA%2C OmpF and LamB'';gbkey=CDS;gene=surA;product=peptidyl-prolyl cis-trans isomerase SurA;protein_id=YP_401805.1;transl_table=11
NC_007606.1	RefSeq	gene	73877	76231	.	-	.	ID=gene74;Dbxref=GeneID:3798959;Name=imp;Note=SDY0079;gbkey=Gene;gene=imp;gene_biotype=protein_coding;locus_tag=SDY_0079
NC_007606.1	RefSeq	CDS	73877	76231	.	-	0	ID=cds68;Parent=gene74;Dbxref=Genbank:YP_401806.1,GeneID:3798959;Name=YP_401806.1;Note=determines N-hexane tolerance and is involved in outer membrane permeability;gbkey=CDS;gene=imp;product=organic solvent tolerance protein;protein_id=YP_401806.1;transl_table=11
NC_007606.1	RefSeq	gene	76486	77301	.	+	.	ID=gene75;Dbxref=GeneID:3799440;Name=djlA;Note=SDY0080;gbkey=Gene;gene=djlA;gene_biotype=protein_coding;locus_tag=SDY_0080
NC_007606.1	RefSeq	CDS	76486	77301	.	+	0	ID=cds69;Parent=gene75;Dbxref=Genbank:YP_401807.1,GeneID:3799440;Name=YP_401807.1;Note=functions as a co-chaperone with DnaK%3B involved in regulation of colanic acid capsule%3B inner membrane protein%3B dimerized via transmembrane domain%3B J-like domain is cytoplasmic and can functionally substitute for DnaJ%3B stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system;gbkey=CDS;gene=djlA;product=Dna-J like membrane chaperone protein;protein_id=YP_401807.1;transl_table=11
NC_007606.1	RefSeq	gene	77596	78312	.	+	.	ID=gene76;Dbxref=GeneID:3799441;Name=yabP;Note=SDY0081;gbkey=Gene;gene=yabP;gene_biotype=protein_coding;locus_tag=SDY_0081
NC_007606.1	RefSeq	CDS	77596	78312	.	+	0	ID=cds70;Parent=gene76;Dbxref=Genbank:YP_401808.1,GeneID:3799441;Name=YP_401808.1;gbkey=CDS;gene=yabP;product=hypothetical protein;protein_id=YP_401808.1;transl_table=11
NC_007606.1	RefSeq	gene	78719	79378	.	-	.	ID=gene77;Dbxref=GeneID:3799442;Name=yabO;Note=SDY0082;gbkey=Gene;gene=yabO;gene_biotype=protein_coding;locus_tag=SDY_0082
NC_007606.1	RefSeq	CDS	78719	79378	.	-	0	ID=cds71;Parent=gene77;Dbxref=Genbank:YP_401809.1,GeneID:3799442;Name=YP_401809.1;Note=catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs;gbkey=CDS;gene=yabO;product=23S rRNA/tRNA pseudouridine synthase A;protein_id=YP_401809.1;transl_table=11
NC_007606.1	RefSeq	gene	79390	82296	.	-	.	ID=gene78;Dbxref=GeneID:3799443;Name=hepA;Note=SDY0083;gbkey=Gene;gene=hepA;gene_biotype=protein_coding;locus_tag=SDY_0083
NC_007606.1	RefSeq	CDS	79390	82296	.	-	0	ID=cds72;Parent=gene78;Dbxref=Genbank:YP_401810.1,GeneID:3799443;Name=YP_401810.1;Note=''transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP%2C when it is trapped or immobilized on tightly supercoiled DNA'';gbkey=CDS;gene=hepA;product=ATP-dependent helicase HepA;protein_id=YP_401810.1;transl_table=11
NC_007606.1	RefSeq	gene	82460	86362	.	-	.	ID=gene79;Dbxref=GeneID:3799447;Name=polB;Note=SDY0087%3B contains in-frame stop codon%3B original product: DNA polymerase II;gbkey=Gene;gene=polB;gene_biotype=pseudogene;locus_tag=SDY_0087;pseudo=true
NC_007606.1	RefSeq	region	83923	84688	.	-	.	ID=id6;Dbxref=GeneID:3799447;gbkey=mobile_element;gene=polB
NC_007606.1	RefSeq	gene	83937	84332	.	-	.	ID=gene80;Dbxref=GeneID:3799444;Name=SDY_0084;Note=SDY0084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0084
NC_007606.1	RefSeq	CDS	83937	84332	.	-	0	ID=cds73;Parent=gene80;Dbxref=Genbank:YP_401811.1,GeneID:3799444;Name=YP_401811.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_401811.1;transl_table=11
NC_007606.1	RefSeq	gene	84359	84631	.	-	.	ID=gene81;Dbxref=GeneID:18262937;Name=SDY_0084a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0084a
NC_007606.1	RefSeq	CDS	84359	84631	.	-	0	ID=cds74;Parent=gene81;Dbxref=Genbank:YP_009000620.1,GeneID:18262937;Name=YP_009000620.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000620.1;transl_table=11
NC_007606.1	RefSeq	region	85015	85782	.	+	.	ID=id7;gbkey=mobile_element;gene=polB
NC_007606.1	RefSeq	gene	85070	85345	.	+	.	ID=gene82;Dbxref=GeneID:3799445;Name=insA;Note=SDY0085;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0085
NC_007606.1	RefSeq	CDS	85070	85345	.	+	0	ID=cds75;Parent=gene82;Dbxref=Genbank:YP_401812.1,GeneID:3799445;Name=YP_401812.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_401812.1;transl_table=11
NC_007606.1	RefSeq	gene	85390	85767	.	+	.	ID=gene83;Dbxref=GeneID:3799446;Name=insB;Note=SDY0086;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0086
NC_007606.1	RefSeq	CDS	85390	85767	.	+	0	ID=cds76;Parent=gene83;Dbxref=Genbank:YP_401813.1,GeneID:3799446;Name=YP_401813.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_401813.1;transl_table=11
NC_007606.1	RefSeq	gene	86437	87132	.	-	.	ID=gene84;Dbxref=GeneID:3799448;Name=araD;Note=SDY0088;gbkey=Gene;gene=araD;gene_biotype=protein_coding;locus_tag=SDY_0088
NC_007606.1	RefSeq	CDS	86437	87132	.	-	0	ID=cds77;Parent=gene84;Dbxref=Genbank:YP_401814.1,GeneID:3799448;Name=YP_401814.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=araD;product=L-ribulose-5-phosphate 4-epimerase;protein_id=YP_401814.1;transl_table=11
NC_007606.1	RefSeq	gene	87300	88802	.	-	.	ID=gene85;Dbxref=GeneID:3799449;Name=araA;Note=SDY0089;gbkey=Gene;gene=araA;gene_biotype=protein_coding;locus_tag=SDY_0089
NC_007606.1	RefSeq	CDS	87300	88802	.	-	0	ID=cds78;Parent=gene85;Dbxref=Genbank:YP_401815.1,GeneID:3799449;Name=YP_401815.1;Note=catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism;gbkey=CDS;gene=araA;product=L-arabinose isomerase;protein_id=YP_401815.1;transl_table=11
NC_007606.1	RefSeq	gene	88813	90513	.	-	.	ID=gene86;Dbxref=GeneID:3799450;Name=araB;Note=SDY0090;gbkey=Gene;gene=araB;gene_biotype=protein_coding;locus_tag=SDY_0090
NC_007606.1	RefSeq	CDS	88813	90513	.	-	0	ID=cds79;Parent=gene86;Dbxref=Genbank:YP_401816.1,GeneID:3799450;Name=YP_401816.1;Note=catalyzes the phosphorylation of ribulose to ribulose 5-phosphate;gbkey=CDS;gene=araB;product=ribulokinase;protein_id=YP_401816.1;transl_table=11
NC_007606.1	RefSeq	gene	90801	91734	.	+	.	ID=gene87;Dbxref=GeneID:3799451;Name=araC;Note=SDY0091%3B frameshift%3B original product: transcriptional regulator for ara operon;gbkey=Gene;gene=araC;gene_biotype=pseudogene;locus_tag=SDY_0091;pseudo=true
NC_007606.1	RefSeq	gene	91820	92584	.	+	.	ID=gene88;Dbxref=GeneID:3799452;Name=yabI;Note=SDY0092;gbkey=Gene;gene=yabI;gene_biotype=protein_coding;locus_tag=SDY_0092
NC_007606.1	RefSeq	CDS	91820	92584	.	+	0	ID=cds80;Parent=gene88;Dbxref=Genbank:YP_401817.1,GeneID:3799452;Name=YP_401817.1;Note=Code: S%3B COG: COG0586;gbkey=CDS;gene=yabI;product=hypothetical protein;protein_id=YP_401817.1;transl_table=11
NC_007606.1	RefSeq	gene	92698	93396	.	-	.	ID=gene89;Dbxref=GeneID:3799453;Name=thiQ;Note=SDY0093;gbkey=Gene;gene=thiQ;gene_biotype=protein_coding;locus_tag=SDY_0093
NC_007606.1	RefSeq	CDS	92698	93396	.	-	0	ID=cds81;Parent=gene89;Dbxref=Genbank:YP_401818.1,GeneID:3799453;Name=YP_401818.1;Note=with TbpA and ThiP is part of the thiamine and TPP transport system;gbkey=CDS;gene=thiQ;product=thiamine ABC transporter ATP-binding protein;protein_id=YP_401818.1;transl_table=11
NC_007606.1	RefSeq	gene	93380	94990	.	-	.	ID=gene90;Dbxref=GeneID:3799454;Name=thiP;Note=SDY0094;gbkey=Gene;gene=thiP;gene_biotype=protein_coding;gene_synonym=sfuB;locus_tag=SDY_0094
NC_007606.1	RefSeq	CDS	93380	94990	.	-	0	ID=cds82;Parent=gene90;Dbxref=Genbank:YP_401819.1,GeneID:3799454;Name=YP_401819.1;Note=permease%3B with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell%3B repressed in presence of exogenous thiamine;gbkey=CDS;gene=thiP;product=thiamine ABC transporter permease;protein_id=YP_401819.1;transl_table=11
NC_007606.1	RefSeq	gene	94966	95949	.	-	.	ID=gene91;Dbxref=GeneID:3799455;Name=tbpA;Note=SDY0095;gbkey=Gene;gene=tbpA;gene_biotype=protein_coding;locus_tag=SDY_0095
NC_007606.1	RefSeq	CDS	94966	95949	.	-	0	ID=cds83;Parent=gene91;Dbxref=Genbank:YP_401820.1,GeneID:3799455;Name=YP_401820.1;Note=part of the thiamine and TPP transport system tbpA-thiPQ;gbkey=CDS;gene=tbpA;product=thiamine ABC transporter substrate-binding protein;protein_id=YP_401820.1;transl_table=11
NC_007606.1	RefSeq	region	96214	96979	.	-	.	ID=id8;gbkey=mobile_element
NC_007606.1	RefSeq	gene	96649	96924	.	-	.	ID=gene92;Dbxref=GeneID:3799456;Name=insA;Note=SDY0096;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0096
NC_007606.1	RefSeq	CDS	96649	96924	.	-	0	ID=cds84;Parent=gene92;Dbxref=Genbank:YP_401821.1,GeneID:3799456;Name=YP_401821.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_401821.1;transl_table=11
NC_007606.1	RefSeq	gene	97447	99105	.	-	.	ID=gene93;Dbxref=GeneID:3799457;Name=yabN;Note=SDY0097;gbkey=Gene;gene=yabN;gene_biotype=protein_coding;locus_tag=SDY_0097
NC_007606.1	RefSeq	CDS	97447	99105	.	-	0	ID=cds85;Parent=gene93;Dbxref=Genbank:YP_401822.1,GeneID:3799457;Name=YP_401822.1;Note=activates sgrS under glucose-phosphate stress conditions;gbkey=CDS;gene=yabN;product=transcriptional regulator SgrR;protein_id=YP_401822.1;transl_table=11
NC_007606.1	RefSeq	gene	99433	100038	.	-	.	ID=gene94;Dbxref=GeneID:3799458;Name=leuD;Note=SDY0098;gbkey=Gene;gene=leuD;gene_biotype=protein_coding;locus_tag=SDY_0098
NC_007606.1	RefSeq	CDS	99433	100038	.	-	0	ID=cds86;Parent=gene94;Dbxref=Genbank:YP_401823.1,GeneID:3799458;Name=YP_401823.1;Note=catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis%3B forms a heterodimer of LeuC/D;gbkey=CDS;gene=leuD;product=isopropylmalate isomerase small subunit;protein_id=YP_401823.1;transl_table=11
NC_007606.1	RefSeq	gene	100049	101449	.	-	.	ID=gene95;Dbxref=GeneID:3795905;Name=leuC;Note=SDY0099;gbkey=Gene;gene=leuC;gene_biotype=protein_coding;locus_tag=SDY_0099
NC_007606.1	RefSeq	CDS	100049	101449	.	-	0	ID=cds87;Parent=gene95;Dbxref=Genbank:YP_401824.1,GeneID:3795905;Name=YP_401824.1;Note=''dehydratase component%2C catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate'';gbkey=CDS;gene=leuC;product=isopropylmalate isomerase large subunit;protein_id=YP_401824.1;transl_table=11
NC_007606.1	RefSeq	gene	101452	102543	.	-	.	ID=gene96;Dbxref=GeneID:3795906;Name=leuB;Note=SDY0100;gbkey=Gene;gene=leuB;gene_biotype=protein_coding;locus_tag=SDY_0100
NC_007606.1	RefSeq	CDS	101452	102543	.	-	0	ID=cds88;Parent=gene96;Dbxref=Genbank:YP_401825.2,GeneID:3795906;Name=YP_401825.2;Note=catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis;gbkey=CDS;gene=leuB;product=3-isopropylmalate dehydrogenase;protein_id=YP_401825.2;transl_table=11
NC_007606.1	RefSeq	gene	102543	104114	.	-	.	ID=gene97;Dbxref=GeneID:3795907;Name=leuA;Note=SDY0101;gbkey=Gene;gene=leuA;gene_biotype=protein_coding;locus_tag=SDY_0101
NC_007606.1	RefSeq	CDS	102543	104114	.	-	0	ID=cds89;Parent=gene97;Dbxref=Genbank:YP_401826.1,GeneID:3795907;Name=YP_401826.1;Note=catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis;gbkey=CDS;gene=leuA;product=2-isopropylmalate synthase;protein_id=YP_401826.1;transl_table=11
NC_007606.1	RefSeq	gene	104207	104290	.	-	.	ID=gene98;Dbxref=GeneID:3795908;Name=leuL;Note=SDY0102;gbkey=Gene;gene=leuL;gene_biotype=protein_coding;locus_tag=SDY_0102
NC_007606.1	RefSeq	CDS	104207	104290	.	-	0	ID=cds90;Parent=gene98;Dbxref=Genbank:YP_401827.1,GeneID:3795908;Name=YP_401827.1;Note=involved in attenuation control of the leuABCD operon in leucine biosynthesis;gbkey=CDS;gene=leuL;product=leu operon leader peptide;protein_id=YP_401827.1;transl_table=11
NC_007606.1	RefSeq	region	104405	105171	.	+	.	ID=id9;gbkey=mobile_element
NC_007606.1	RefSeq	gene	104462	104734	.	+	.	ID=gene99;Dbxref=GeneID:18262938;Name=SDY_0102a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0102a
NC_007606.1	RefSeq	CDS	104462	104734	.	+	0	ID=cds91;Parent=gene99;Dbxref=Genbank:YP_009000621.1,GeneID:18262938;Name=YP_009000621.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000621.1;transl_table=11
NC_007606.1	RefSeq	gene	105157	105393	.	+	.	ID=gene100;Dbxref=GeneID:3795910;Name=leuO;Note=SDY0104%3B truncated%3B original product: probable transcriptional activator for leuABCD operon;gbkey=Gene;gene=leuO;gene_biotype=pseudogene;locus_tag=SDY_0104;pseudo=true
NC_007606.1	RefSeq	region	105389	106156	.	-	.	ID=id10;gbkey=mobile_element;gene=leuO
NC_007606.1	RefSeq	gene	105404	105781	.	-	.	ID=gene101;Dbxref=GeneID:3795911;Name=insB;Note=SDY0105;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0105
NC_007606.1	RefSeq	CDS	105404	105781	.	-	0	ID=cds92;Parent=gene101;Dbxref=Genbank:YP_009000622.1,GeneID:3795911;Name=YP_009000622.1;gbkey=CDS;gene=insB;product=insertion sequence element IS1 transposase;protein_id=YP_009000622.1;transl_table=11
NC_007606.1	RefSeq	gene	105826	106101	.	-	.	ID=gene102;Dbxref=GeneID:3795912;Name=insA;Note=SDY0106;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0106
NC_007606.1	RefSeq	CDS	105826	106101	.	-	0	ID=cds93;Parent=gene102;Dbxref=Genbank:YP_401830.1,GeneID:3795912;Name=YP_401830.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_401830.1;transl_table=11
NC_007606.1	RefSeq	gene	106283	108007	.	+	.	ID=gene103;Dbxref=GeneID:3795913;Name=ilvI;Note=SDY0107;gbkey=Gene;gene=ilvI;gene_biotype=protein_coding;locus_tag=SDY_0107
NC_007606.1	RefSeq	CDS	106283	108007	.	+	0	ID=cds94;Parent=gene103;Dbxref=Genbank:YP_401831.1,GeneID:3795913;Name=YP_401831.1;Note=''catalyzes the formation of 2-acetolactate from pyruvate%2C leucine sensitive'';gbkey=CDS;gene=ilvI;product=acetolactate synthase 3 catalytic subunit;protein_id=YP_401831.1;transl_table=11
NC_007606.1	RefSeq	gene	108010	108501	.	+	.	ID=gene104;Dbxref=GeneID:3795914;Name=ilvH;Note=SDY0108;gbkey=Gene;gene=ilvH;gene_biotype=protein_coding;locus_tag=SDY_0108
NC_007606.1	RefSeq	CDS	108010	108501	.	+	0	ID=cds95;Parent=gene104;Dbxref=Genbank:YP_401832.1,GeneID:3795914;Name=YP_401832.1;Note=''with IlvI catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase 3 small subunit'';gbkey=CDS;gene=ilvH;product=acetolactate synthase 3 regulatory subunit;protein_id=YP_401832.1;transl_table=11
NC_007606.1	RefSeq	region	108513	108599	.	+	.	ID=id11;Note=similar to fruR leader peptide;gbkey=misc_feature
NC_007606.1	RefSeq	gene	108681	109685	.	+	.	ID=gene105;Dbxref=GeneID:3795916;Name=fruR;Note=SDY0110;gbkey=Gene;gene=fruR;gene_biotype=protein_coding;locus_tag=SDY_0110
NC_007606.1	RefSeq	CDS	108681	109685	.	+	0	ID=cds96;Parent=gene105;Dbxref=Genbank:YP_401834.1,GeneID:3795916;Name=YP_401834.1;Note=binds D-fructose as an inducer%3B involved in regulation of operons for central pathways of carbon metabolism;gbkey=CDS;gene=fruR;product=DNA-binding transcriptional regulator FruR;protein_id=YP_401834.1;transl_table=11
NC_007606.1	RefSeq	gene	110288	110746	.	+	.	ID=gene106;Dbxref=GeneID:3795917;Name=yabB;Note=SDY0111;gbkey=Gene;gene=yabB;gene_biotype=protein_coding;locus_tag=SDY_0111
NC_007606.1	RefSeq	CDS	110288	110746	.	+	0	ID=cds97;Parent=gene106;Dbxref=Genbank:YP_401835.1,GeneID:3795917;Name=YP_401835.1;Note=MraZ%3B UPF0040%3B crystal structure shows similarity to AbrB;gbkey=CDS;gene=yabB;product=cell division protein MraZ;protein_id=YP_401835.1;transl_table=11
NC_007606.1	RefSeq	gene	110748	111689	.	+	.	ID=gene107;Dbxref=GeneID:3795918;Name=mraW;Note=SDY0112;gbkey=Gene;gene=mraW;gene_biotype=protein_coding;locus_tag=SDY_0112
NC_007606.1	RefSeq	CDS	110748	111689	.	+	0	ID=cds98;Parent=gene107;Dbxref=Genbank:YP_401836.1,GeneID:3795918;Name=YP_401836.1;Note=Code: M%3B COG: COG0275;gbkey=CDS;gene=mraW;product=S-adenosyl-methyltransferase MraW;protein_id=YP_401836.1;transl_table=11
NC_007606.1	RefSeq	gene	111686	112051	.	+	.	ID=gene108;Dbxref=GeneID:3795919;Name=ftsL;Note=SDY0113;gbkey=Gene;gene=ftsL;gene_biotype=protein_coding;locus_tag=SDY_0113
NC_007606.1	RefSeq	CDS	111686	112051	.	+	0	ID=cds99;Parent=gene108;Dbxref=Genbank:YP_401837.1,GeneID:3795919;Name=YP_401837.1;Note=membrane bound cell division protein at septum containing leucine zipper motif;gbkey=CDS;gene=ftsL;product=cell division protein FtsL;protein_id=YP_401837.1;transl_table=11
NC_007606.1	RefSeq	gene	112067	113833	.	+	.	ID=gene109;Dbxref=GeneID:3795920;Name=ftsI;Note=SDY0114;gbkey=Gene;gene=ftsI;gene_biotype=protein_coding;locus_tag=SDY_0114
NC_007606.1	RefSeq	CDS	112067	113833	.	+	0	ID=cds100;Parent=gene109;Dbxref=Genbank:YP_401838.1,GeneID:3795920;Name=YP_401838.1;Note=Code: M%3B COG: COG0768;gbkey=CDS;gene=ftsI;product=penicillin-binding protein 3;protein_id=YP_401838.1;transl_table=11
NC_007606.1	RefSeq	gene	113820	115307	.	+	.	ID=gene110;Dbxref=GeneID:3795921;Name=murE;Note=SDY0115;gbkey=Gene;gene=murE;gene_biotype=protein_coding;locus_tag=SDY_0115
NC_007606.1	RefSeq	CDS	113820	115307	.	+	0	ID=cds101;Parent=gene110;Dbxref=Genbank:YP_401839.1,GeneID:3795921;Name=YP_401839.1;Note=involved in cell wall formation%3B peptidoglycan synthesis%3B cytoplasmic enzyme%3B catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate;gbkey=CDS;gene=murE;product=UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C6-diaminopimelate ligase;protein_id=YP_401839.1;transl_table=11
NC_007606.1	RefSeq	gene	115304	116662	.	+	.	ID=gene111;Dbxref=GeneID:3795922;Name=murF;Note=SDY0116;gbkey=Gene;gene=murF;gene_biotype=protein_coding;locus_tag=SDY_0116
NC_007606.1	RefSeq	CDS	115304	116662	.	+	0	ID=cds102;Parent=gene111;Dbxref=Genbank:YP_401840.1,GeneID:3795922;Name=YP_401840.1;Note=Code: M%3B COG: COG0770;gbkey=CDS;gene=murF;product=UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase;protein_id=YP_401840.1;transl_table=11
NC_007606.1	RefSeq	gene	116656	117738	.	+	.	ID=gene112;Dbxref=GeneID:3795923;Name=mraY;Note=SDY0117;gbkey=Gene;gene=mraY;gene_biotype=protein_coding;locus_tag=SDY_0117
NC_007606.1	RefSeq	CDS	116656	117738	.	+	0	ID=cds103;Parent=gene112;Dbxref=Genbank:YP_401841.1,GeneID:3795923;Name=YP_401841.1;Note=First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan;gbkey=CDS;gene=mraY;product=phospho-N-acetylmuramoyl-pentapeptide-transferase;protein_id=YP_401841.1;transl_table=11
NC_007606.1	RefSeq	gene	117741	119057	.	+	.	ID=gene113;Dbxref=GeneID:3795924;Name=murD;Note=SDY0118;gbkey=Gene;gene=murD;gene_biotype=protein_coding;locus_tag=SDY_0118
NC_007606.1	RefSeq	CDS	117741	119057	.	+	0	ID=cds104;Parent=gene113;Dbxref=Genbank:YP_401842.1,GeneID:3795924;Name=YP_401842.1;Note=UDP-N-acetylmuramoylalanine--D-glutamate ligase%3B involved in peptidoglycan biosynthesis%3B cytoplasmic%3B catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation;gbkey=CDS;gene=murD;product=UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase;protein_id=YP_401842.1;transl_table=11
NC_007606.1	RefSeq	gene	119057	120301	.	+	.	ID=gene114;Dbxref=GeneID:3799344;Name=ftsW;Note=SDY0119;gbkey=Gene;gene=ftsW;gene_biotype=protein_coding;locus_tag=SDY_0119
NC_007606.1	RefSeq	CDS	119057	120301	.	+	0	ID=cds105;Parent=gene114;Dbxref=Genbank:YP_401843.1,GeneID:3799344;Name=YP_401843.1;Note=integral membrane protein involved in stabilizing FstZ ring during cell division;gbkey=CDS;gene=ftsW;product=cell division protein FtsW;protein_id=YP_401843.1;transl_table=11
NC_007606.1	RefSeq	gene	120298	121365	.	+	.	ID=gene115;Dbxref=GeneID:3799345;Name=murG;Note=SDY0120;gbkey=Gene;gene=murG;gene_biotype=protein_coding;locus_tag=SDY_0120
NC_007606.1	RefSeq	CDS	120298	121365	.	+	0	ID=cds106;Parent=gene115;Dbxref=Genbank:YP_401844.1,GeneID:3799345;Name=YP_401844.1;Note=UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase%3B involved in cell wall formation%3B inner membrane-associated%3B last step of peptidoglycan synthesis;gbkey=CDS;gene=murG;product=undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase;protein_id=YP_401844.1;transl_table=11
NC_007606.1	RefSeq	gene	121419	122894	.	+	.	ID=gene116;Dbxref=GeneID:3799346;Name=murC;Note=SDY0121;gbkey=Gene;gene=murC;gene_biotype=protein_coding;locus_tag=SDY_0121
NC_007606.1	RefSeq	CDS	121419	122894	.	+	0	ID=cds107;Parent=gene116;Dbxref=Genbank:YP_401845.1,GeneID:3799346;Name=YP_401845.1;Note=Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis;gbkey=CDS;gene=murC;product=UDP-N-acetylmuramate--L-alanine ligase;protein_id=YP_401845.1;transl_table=11
NC_007606.1	RefSeq	gene	122887	123807	.	+	.	ID=gene117;Dbxref=GeneID:3799347;Name=ddl;Note=SDY0122;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=SDY_0122
NC_007606.1	RefSeq	CDS	122887	123807	.	+	0	ID=cds108;Parent=gene117;Dbxref=Genbank:YP_401846.1,GeneID:3799347;Name=YP_401846.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanine--D-alanine ligase;protein_id=YP_401846.1;transl_table=11
NC_007606.1	RefSeq	gene	123809	124639	.	+	.	ID=gene118;Dbxref=GeneID:3799348;Name=ftsQ;Note=SDY0123;gbkey=Gene;gene=ftsQ;gene_biotype=protein_coding;locus_tag=SDY_0123
NC_007606.1	RefSeq	CDS	123809	124639	.	+	0	ID=cds109;Parent=gene118;Dbxref=Genbank:YP_401847.1,GeneID:3799348;Name=YP_401847.1;Note=involved in septum formation;gbkey=CDS;gene=ftsQ;product=cell division protein FtsQ;protein_id=YP_401847.1;transl_table=11
NC_007606.1	RefSeq	gene	124636	125898	.	+	.	ID=gene119;Dbxref=GeneID:3799349;Name=ftsA;Note=SDY0124;gbkey=Gene;gene=ftsA;gene_biotype=protein_coding;locus_tag=SDY_0124
NC_007606.1	RefSeq	CDS	124636	125898	.	+	0	ID=cds110;Parent=gene119;Dbxref=Genbank:YP_401848.1,GeneID:3799349;Name=YP_401848.1;Note=ATP-binding involved in recruitment of FtsK to Z ring%3B essential cell division protein%3B colocalizes with FtsZ through direct interaction to the septal ring structure%3B structurally similar to eukaryotic actin%3B binds directly to the cell membrane;gbkey=CDS;gene=ftsA;product=cell division protein FtsA;protein_id=YP_401848.1;transl_table=11
NC_007606.1	RefSeq	gene	125959	127110	.	+	.	ID=gene120;Dbxref=GeneID:3799350;Name=ftsZ;Note=SDY0125;gbkey=Gene;gene=ftsZ;gene_biotype=protein_coding;locus_tag=SDY_0125
NC_007606.1	RefSeq	CDS	125959	127110	.	+	0	ID=cds111;Parent=gene120;Dbxref=Genbank:YP_401849.1,GeneID:3799350;Name=YP_401849.1;Note=''GTPase%3B similar structure to tubulin%3B forms ring-shaped polymers at the site of cell division%3B other proteins such as FtsA%2C ZipA%2C and ZapA%2C interact with and regulate FtsZ function'';gbkey=CDS;gene=ftsZ;product=cell division protein FtsZ;protein_id=YP_401849.1;transl_table=11
NC_007606.1	RefSeq	gene	127211	128128	.	+	.	ID=gene121;Dbxref=GeneID:3799351;Name=lpxC;Note=SDY0126;gbkey=Gene;gene=lpxC;gene_biotype=protein_coding;locus_tag=SDY_0126
NC_007606.1	RefSeq	CDS	127211	128128	.	+	0	ID=cds112;Parent=gene121;Dbxref=Genbank:YP_401850.1,GeneID:3799351;Name=YP_401850.1;Note=zinc-dependent%3B catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis;gbkey=CDS;gene=lpxC;product=UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase;protein_id=YP_401850.1;transl_table=11
NC_007606.1	RefSeq	gene	128358	128870	.	+	.	ID=gene122;Dbxref=GeneID:3799352;Name=yacA;Note=SDY0127;gbkey=Gene;gene=yacA;gene_biotype=protein_coding;locus_tag=SDY_0127
NC_007606.1	RefSeq	CDS	128358	128870	.	+	0	ID=cds113;Parent=gene122;Dbxref=Genbank:YP_401851.2,GeneID:3799352;Name=YP_401851.2;Note=secM translational pause allows for the initiation of secA translation;gbkey=CDS;gene=yacA;product=SecA regulator SecM;protein_id=YP_401851.2;transl_table=11
NC_007606.1	RefSeq	gene	128932	131637	.	+	.	ID=gene123;Dbxref=GeneID:3799353;Name=secA;Note=SDY0128;gbkey=Gene;gene=secA;gene_biotype=protein_coding;gene_synonym=azi,div;locus_tag=SDY_0128
NC_007606.1	RefSeq	CDS	128932	131637	.	+	0	ID=cds114;Parent=gene123;Dbxref=Genbank:YP_401852.1,GeneID:3799353;Name=YP_401852.1;Note=functions in protein export%3B can interact with acidic membrane phospholipids and the SecYEG protein complex%3B binds to preproteins%3B binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein%3B ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane%3B additional proteins SecD/F/YajC aid SecA recycling%3B exists in an equilibrium between monomers and dimers%3B may possibly form higher order oligomers%3B proteins in this cluster correspond SecA1%3B SecA2 is not essential and seems to play a role in secretion of a subset of proteins;gbkey=CDS;gene=secA;product=preprotein translocase subunit SecA;protein_id=YP_401852.1;transl_table=11
NC_007606.1	RefSeq	gene	131697	132095	.	+	.	ID=gene124;Dbxref=GeneID:3799354;Name=mutT;Note=SDY0129;gbkey=Gene;gene=mutT;gene_biotype=protein_coding;locus_tag=SDY_0129
NC_007606.1	RefSeq	CDS	131697	132095	.	+	0	ID=cds115;Parent=gene124;Dbxref=Genbank:YP_401853.1,GeneID:3799354;Name=YP_401853.1;Note=Code: LR%3B COG: COG0494;gbkey=CDS;gene=mutT;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=YP_401853.1;transl_table=11
NC_007606.1	RefSeq	gene	132100	132234	.	-	.	ID=gene125;Dbxref=GeneID:3799355;Name=SDY_0130;Note=SDY0130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0130
NC_007606.1	RefSeq	CDS	132100	132234	.	-	0	ID=cds116;Parent=gene125;Dbxref=Genbank:YP_401854.1,GeneID:3799355;Name=YP_401854.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_401854.1;transl_table=11
NC_007606.1	RefSeq	gene	132185	132382	.	-	.	ID=gene126;Dbxref=GeneID:3799356;Name=yacG;Note=SDY0131;gbkey=Gene;gene=yacG;gene_biotype=protein_coding;locus_tag=SDY_0131
NC_007606.1	RefSeq	CDS	132185	132382	.	-	0	ID=cds117;Parent=gene126;Dbxref=Genbank:YP_401855.1,GeneID:3799356;Name=YP_401855.1;Note=Code: S%3B COG: COG3024;gbkey=CDS;gene=yacG;product=zinc-binding protein;protein_id=YP_401855.1;transl_table=11
NC_007606.1	RefSeq	gene	132392	133135	.	-	.	ID=gene127;Dbxref=GeneID:3799357;Name=yacF;Note=SDY0132;gbkey=Gene;gene=yacF;gene_biotype=protein_coding;locus_tag=SDY_0132
NC_007606.1	RefSeq	CDS	132392	133135	.	-	0	ID=cds118;Parent=gene127;Dbxref=Genbank:YP_401856.1,GeneID:3799357;Name=YP_401856.1;Note=Code: S%3B COG: COG4582;gbkey=CDS;gene=yacF;product=hypothetical protein;protein_id=YP_401856.1;transl_table=11
NC_007606.1	RefSeq	gene	133135	133755	.	-	.	ID=gene128;Dbxref=GeneID:3799358;Name=coaE;Note=SDY0133;gbkey=Gene;gene=coaE;gene_biotype=protein_coding;locus_tag=SDY_0133
NC_007606.1	RefSeq	CDS	133135	133755	.	-	0	ID=cds119;Parent=gene128;Dbxref=Genbank:YP_401857.1,GeneID:3799358;Name=YP_401857.1;Note=catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A%3B involved in coenzyme A biosynthesis;gbkey=CDS;gene=coaE;product=dephospho-CoA kinase;protein_id=YP_401857.1;transl_table=11
NC_007606.1	RefSeq	gene	133980	135023	.	+	.	ID=gene129;Dbxref=GeneID:3799359;Name=guaC;Note=SDY0134;gbkey=Gene;gene=guaC;gene_biotype=protein_coding;locus_tag=SDY_0134
NC_007606.1	RefSeq	CDS	133980	135023	.	+	0	ID=cds120;Parent=gene129;Dbxref=Genbank:YP_401858.1,GeneID:3799359;Name=YP_401858.1;Note=catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate;gbkey=CDS;gene=guaC;product=guanosine 5'-monophosphate oxidoreductase;protein_id=YP_401858.1;transl_table=11
NC_007606.1	RefSeq	gene	135058	136257	.	-	.	ID=gene130;Dbxref=GeneID:3799361;Name=hofC;Note=''SDY0136%3B contains in-frame stop codon%3B original product:  integral membrane protein involved in biogenesis of fimbriae%2C protein transport%2C DNA uptake'';gbkey=Gene;gene=hofC;gene_biotype=pseudogene;locus_tag=SDY_0136;pseudo=true
NC_007606.1	RefSeq	gene	136247	137631	.	-	.	ID=gene131;Dbxref=GeneID:3799362;Name=hofB;Note=SDY0137;gbkey=Gene;gene=hofB;gene_biotype=pseudogene;locus_tag=SDY_0137;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	137641	138081	.	-	.	ID=gene132;Dbxref=GeneID:3799054;Name=ppdD;Note=SDY0138;gbkey=Gene;gene=ppdD;gene_biotype=protein_coding;locus_tag=SDY_0138
NC_007606.1	RefSeq	CDS	137641	138081	.	-	0	ID=cds121;Parent=gene132;Dbxref=Genbank:YP_401861.1,GeneID:3799054;Name=YP_401861.1;Note=Code: NU%3B COG: COG4969;gbkey=CDS;gene=ppdD;product=major pilin subunit;protein_id=YP_401861.1;transl_table=11
NC_007606.1	RefSeq	gene	138284	139177	.	-	.	ID=gene133;Dbxref=GeneID:3799055;Name=nadC;Note=SDY0139;gbkey=Gene;gene=nadC;gene_biotype=protein_coding;locus_tag=SDY_0139
NC_007606.1	RefSeq	CDS	138284	139177	.	-	0	ID=cds122;Parent=gene133;Dbxref=Genbank:YP_401862.1,GeneID:3799055;Name=YP_401862.1;Note=''catalyzes the formation of pyridine-2%2C3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide'';gbkey=CDS;gene=nadC;product=quinolinate phosphoribosyltransferase;protein_id=YP_401862.1;transl_table=11
NC_007606.1	RefSeq	gene	139265	139816	.	+	.	ID=gene134;Dbxref=GeneID:3799056;Name=ampD;Note=SDY0140;gbkey=Gene;gene=ampD;gene_biotype=protein_coding;locus_tag=SDY_0140
NC_007606.1	RefSeq	CDS	139265	139816	.	+	0	ID=cds123;Parent=gene134;Dbxref=Genbank:YP_401863.1,GeneID:3799056;Name=YP_401863.1;Note=Code: V%3B COG: COG3023;gbkey=CDS;gene=ampD;product=N-acetyl-anhydromuranmyl-L-alanine amidase;protein_id=YP_401863.1;transl_table=11
NC_007606.1	RefSeq	gene	139813	140667	.	+	.	ID=gene135;Dbxref=GeneID:3799057;Name=ampE;Note=SDY0141;gbkey=Gene;gene=ampE;gene_biotype=protein_coding;locus_tag=SDY_0141
NC_007606.1	RefSeq	CDS	139813	140667	.	+	0	ID=cds124;Parent=gene135;Dbxref=Genbank:YP_401864.1,GeneID:3799057;Name=YP_401864.1;Note=involved in regulation of beta-lactamase%3B signaling protein;gbkey=CDS;gene=ampE;product=regulatory protein AmpE;protein_id=YP_401864.1;transl_table=11
NC_007606.1	RefSeq	gene	140710	142083	.	-	.	ID=gene136;Dbxref=GeneID:3799058;Name=aroP;Note=SDY0142;gbkey=Gene;gene=aroP;gene_biotype=protein_coding;locus_tag=SDY_0142
NC_007606.1	RefSeq	CDS	140710	142083	.	-	0	ID=cds125;Parent=gene136;Dbxref=Genbank:YP_401865.1,GeneID:3799058;Name=YP_401865.1;Note=Code: E%3B COG: COG1113;gbkey=CDS;gene=aroP;product=aromatic amino acid transporter;protein_id=YP_401865.1;transl_table=11
NC_007606.1	RefSeq	gene	142624	143388	.	+	.	ID=gene137;Dbxref=GeneID:3799059;Name=pdhR;Note=SDY0143;gbkey=Gene;gene=pdhR;gene_biotype=protein_coding;locus_tag=SDY_0143
NC_007606.1	RefSeq	CDS	142624	143388	.	+	0	ID=cds126;Parent=gene137;Dbxref=Genbank:YP_401866.1,GeneID:3799059;Name=YP_401866.1;Note=activates lctPRD operon%3B autoregulates itself through repression of pdhR-aceEF-lpdA operon%3B regulates pyruvate dehydrogenase complex;gbkey=CDS;gene=pdhR;product=transcriptional regulator PdhR;protein_id=YP_401866.1;transl_table=11
NC_007606.1	RefSeq	gene	143549	146212	.	+	.	ID=gene138;Dbxref=GeneID:3799060;Name=aceE;Note=SDY0144;gbkey=Gene;gene=aceE;gene_biotype=protein_coding;locus_tag=SDY_0144
NC_007606.1	RefSeq	CDS	143549	146212	.	+	0	ID=cds127;Parent=gene138;Dbxref=Genbank:YP_401867.1,GeneID:3799060;Name=YP_401867.1;Note=E1 component%3B part of pyruvate dehydrogenase%3B forms a complex with DlaT and LpdC;gbkey=CDS;gene=aceE;product=pyruvate dehydrogenase subunit E1;protein_id=YP_401867.1;transl_table=11
NC_007606.1	RefSeq	gene	146227	148107	.	+	.	ID=gene139;Dbxref=GeneID:3799061;Name=aceF;Note=SDY0145;gbkey=Gene;gene=aceF;gene_biotype=protein_coding;locus_tag=SDY_0145
NC_007606.1	RefSeq	CDS	146227	148107	.	+	0	ID=cds128;Parent=gene139;Dbxref=Genbank:YP_401868.1,GeneID:3799061;Name=YP_401868.1;Note=E2 component of pyruvate dehydrogenase multienzyme complex%3B in Escherichia coli AceF contains three N-terminal lipoyl domains;gbkey=CDS;gene=aceF;product=dihydrolipoamide acetyltransferase;protein_id=YP_401868.1;transl_table=11
NC_007606.1	RefSeq	gene	148315	149739	.	+	.	ID=gene140;Dbxref=GeneID:3799062;Name=lpdA;Note=SDY0146;gbkey=Gene;gene=lpdA;gene_biotype=protein_coding;locus_tag=SDY_0146
NC_007606.1	RefSeq	CDS	148315	149739	.	+	0	ID=cds129;Parent=gene140;Dbxref=Genbank:YP_401869.1,GeneID:3799062;Name=YP_401869.1;Note=E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex%3B catalyzes the oxidation of dihydrolipoamide to lipoamide;gbkey=CDS;gene=lpdA;product=dihydrolipoamide dehydrogenase;protein_id=YP_401869.1;transl_table=11
NC_007606.1	RefSeq	gene	149810	151263	.	-	.	ID=gene141;Dbxref=GeneID:3799063;Name=SDY_0147;Note=SDY0147;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0147;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	151389	152156	.	-	.	ID=id12;gbkey=mobile_element
NC_007606.1	RefSeq	gene	151404	151781	.	-	.	ID=gene142;Dbxref=GeneID:3799065;Name=insB;Note=SDY0149;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0149
NC_007606.1	RefSeq	CDS	151404	151781	.	-	0	ID=cds130;Parent=gene142;Dbxref=Genbank:YP_401872.1,GeneID:3799065;Name=YP_401872.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_401872.1;transl_table=11
NC_007606.1	RefSeq	gene	151826	152101	.	-	.	ID=gene143;Dbxref=GeneID:3799066;Name=insA;Note=SDY0150;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0150
NC_007606.1	RefSeq	CDS	151826	152101	.	-	0	ID=cds131;Parent=gene143;Dbxref=Genbank:YP_401873.1,GeneID:3799066;Name=YP_401873.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_401873.1;transl_table=11
NC_007606.1	RefSeq	gene	152152	152643	.	-	.	ID=gene144;Dbxref=GeneID:3799067;Name=SDY_0151;Note=SDY0151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0151
NC_007606.1	RefSeq	CDS	152152	152643	.	-	0	ID=cds132;Parent=gene144;Dbxref=Genbank:YP_401874.1,GeneID:3799067;Name=YP_401874.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_401874.1;transl_table=11
NC_007606.1	RefSeq	region	152607	153372	.	-	.	ID=id13;gbkey=mobile_element
NC_007606.1	RefSeq	gene	152621	153016	.	-	.	ID=gene145;Dbxref=GeneID:3799068;Name=SDY_0152;Note=SDY0152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0152
NC_007606.1	RefSeq	CDS	152621	153016	.	-	0	ID=cds133;Parent=gene145;Dbxref=Genbank:YP_401875.1,GeneID:3799068;Name=YP_401875.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_401875.1;transl_table=11
NC_007606.1	RefSeq	gene	153043	153315	.	-	.	ID=gene146;Dbxref=GeneID:18262939;Name=SDY0152a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY0152a
NC_007606.1	RefSeq	CDS	153043	153315	.	-	0	ID=cds134;Parent=gene146;Dbxref=Genbank:YP_009000623.1,GeneID:18262939;Name=YP_009000623.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000623.1;transl_table=11
NC_007606.1	RefSeq	gene	153922	154716	.	+	.	ID=gene147;Dbxref=GeneID:3799070;Name=panB;Note=SDY0154;gbkey=Gene;gene=panB;gene_biotype=protein_coding;locus_tag=SDY_0154
NC_007606.1	RefSeq	CDS	153922	154716	.	+	0	ID=cds135;Parent=gene147;Dbxref=Genbank:YP_401877.1,GeneID:3799070;Name=YP_401877.1;Note=''catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5%2C10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate'';gbkey=CDS;gene=panB;product=3-methyl-2-oxobutanoate hydroxymethyltransferase;protein_id=YP_401877.1;transl_table=11
NC_007606.1	RefSeq	gene	154728	155579	.	+	.	ID=gene148;Dbxref=GeneID:3799071;Name=panC;Note=SDY0155;gbkey=Gene;gene=panC;gene_biotype=protein_coding;locus_tag=SDY_0155
NC_007606.1	RefSeq	CDS	154728	155579	.	+	0	ID=cds136;Parent=gene148;Dbxref=Genbank:YP_401878.1,GeneID:3799071;Name=YP_401878.1;Note=catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine;gbkey=CDS;gene=panC;product=pantoate--beta-alanine ligase;protein_id=YP_401878.1;transl_table=11
NC_007606.1	RefSeq	region	155817	156584	.	+	.	ID=id14;gbkey=mobile_element
NC_007606.1	RefSeq	gene	156192	156569	.	+	.	ID=gene149;Dbxref=GeneID:3799072;Name=insB;Note=SDY0156;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0156
NC_007606.1	RefSeq	CDS	156192	156569	.	+	0	ID=cds137;Parent=gene149;Dbxref=Genbank:YP_401879.1,GeneID:3799072;Name=YP_401879.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_401879.1;transl_table=11
NC_007606.1	RefSeq	region	156761	157527	.	+	.	ID=id15;gbkey=mobile_element
NC_007606.1	RefSeq	gene	156818	157090	.	+	.	ID=gene150;Dbxref=GeneID:18262940;Name=SDY0156a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY0156a
NC_007606.1	RefSeq	CDS	156818	157090	.	+	0	ID=cds138;Parent=gene150;Dbxref=Genbank:YP_009000624.1,GeneID:18262940;Name=YP_009000624.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000624.1;transl_table=11
NC_007606.1	RefSeq	gene	157117	157512	.	+	.	ID=gene151;Dbxref=GeneID:3799073;Name=SDY_0157;Note=SDY0157;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0157
NC_007606.1	RefSeq	CDS	157117	157512	.	+	0	ID=cds139;Parent=gene151;Dbxref=Genbank:YP_401880.1,GeneID:3799073;Name=YP_401880.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_401880.1;transl_table=11
NC_007606.1	RefSeq	gene	157582	158061	.	-	.	ID=gene152;Dbxref=GeneID:3795789;Name=folK;Note=SDY0158;gbkey=Gene;gene=folK;gene_biotype=protein_coding;locus_tag=SDY_0158
NC_007606.1	RefSeq	CDS	157582	158061	.	-	0	ID=cds140;Parent=gene152;Dbxref=Genbank:YP_401881.1,GeneID:3795789;Name=YP_401881.1;Note=''catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine and ATP'';gbkey=CDS;gene=folK;product=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase;protein_id=YP_401881.1;transl_table=11
NC_007606.1	RefSeq	gene	158058	159476	.	-	.	ID=gene153;Dbxref=GeneID:3795790;Name=pcnB;Note=SDY0159;gbkey=Gene;gene=pcnB;gene_biotype=protein_coding;locus_tag=SDY_0159
NC_007606.1	RefSeq	CDS	158058	159476	.	-	0	ID=cds141;Parent=gene153;Dbxref=Genbank:YP_401882.2,GeneID:3795790;Name=YP_401882.2;Note=Polymerase that creates the 3' poly(A) tail found in some mRNA's;gbkey=CDS;gene=pcnB;product=poly(A) polymerase;protein_id=YP_401882.2;transl_table=11
NC_007606.1	RefSeq	gene	159515	160411	.	-	.	ID=gene154;Dbxref=GeneID:3795791;Name=yadB;Note=SDY0160;gbkey=Gene;gene=yadB;gene_biotype=protein_coding;locus_tag=SDY_0160
NC_007606.1	RefSeq	CDS	159515	160411	.	-	0	ID=cds142;Parent=gene154;Dbxref=Genbank:YP_401883.2,GeneID:3795791;Name=YP_401883.2;Note=''this tRNA synthetase lacks the tRNA anticodon interaction domain%3B instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4%2C5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp%3B the modified tRNA does not bind elongation factor Tu'';gbkey=CDS;gene=yadB;product=glutamyl-Q tRNA(Asp) synthetase;protein_id=YP_401883.2;transl_table=11
NC_007606.1	RefSeq	gene	160478	160933	.	-	.	ID=gene155;Dbxref=GeneID:3795792;Name=dksA;Note=SDY0161;gbkey=Gene;gene=dksA;gene_biotype=protein_coding;locus_tag=SDY_0161
NC_007606.1	RefSeq	CDS	160478	160933	.	-	0	ID=cds143;Parent=gene155;Dbxref=Genbank:YP_401884.1,GeneID:3795792;Name=YP_401884.1;Note=Code: T%3B COG: COG1734;gbkey=CDS;gene=dksA;product=DnaK transcriptional regulator DksA;protein_id=YP_401884.1;transl_table=11
NC_007606.1	RefSeq	gene	161111	161815	.	-	.	ID=gene156;Dbxref=GeneID:3795793;Name=sfsA;Note=SDY0162;gbkey=Gene;gene=sfsA;gene_biotype=protein_coding;locus_tag=SDY_0162
NC_007606.1	RefSeq	CDS	161111	161815	.	-	0	ID=cds144;Parent=gene156;Dbxref=Genbank:YP_401885.1,GeneID:3795793;Name=YP_401885.1;Note=Regulatory factor involved in maltose metabolism;gbkey=CDS;gene=sfsA;product=sugar fermentation stimulation protein A;protein_id=YP_401885.1;transl_table=11
NC_007606.1	RefSeq	gene	161830	162369	.	-	.	ID=gene157;Dbxref=GeneID:3795794;Name=yadP;Note=SDY0163;gbkey=Gene;gene=yadP;gene_biotype=protein_coding;locus_tag=SDY_0163
NC_007606.1	RefSeq	CDS	161830	162369	.	-	0	ID=cds145;Parent=gene157;Dbxref=Genbank:YP_401886.1,GeneID:3795794;Name=YP_401886.1;Note=Code: J%3B COG: COG1514;gbkey=CDS;gene=yadP;product=hypothetical protein;protein_id=YP_401886.1;transl_table=11
NC_007606.1	RefSeq	gene	162434	164668	.	+	.	ID=gene158;Dbxref=GeneID:3795795;Name=hrpB;Note=''SDY0164%3B contains in-frame stop codon%3B original product: helicase%2C ATP-dependent'';gbkey=Gene;gene=hrpB;gene_biotype=pseudogene;locus_tag=SDY_0164;pseudo=true
NC_007606.1	RefSeq	gene	165059	167593	.	+	.	ID=gene159;Dbxref=GeneID:3795796;Name=mrcB;Note=SDY0165;gbkey=Gene;gene=mrcB;gene_biotype=protein_coding;gene_synonym=ponB;locus_tag=SDY_0165
NC_007606.1	RefSeq	CDS	165059	167593	.	+	0	ID=cds146;Parent=gene159;Dbxref=Genbank:YP_401887.1,GeneID:3795796;Name=YP_401887.1;Note=''bifunctional periplasmic enzyme%3B contains transglycosylase and transpeptidase activity%3B major enzyme for peptidoglycan biosynthesis in Escherichia coli%3B transmembrane protein%3B forms dimers%3B three variants%2C one of which may be a degradation product%2C while the other appears to result from an alternative initiation site%2C are found within the cell'';gbkey=CDS;gene=mrcB;product=penicillin-binding protein 1b;protein_id=YP_401887.1;transl_table=11
NC_007606.1	RefSeq	gene	167813	170056	.	+	.	ID=gene160;Dbxref=GeneID:3795797;Name=fhuA;Note=SDY0166;gbkey=Gene;gene=fhuA;gene_biotype=protein_coding;locus_tag=SDY_0166
NC_007606.1	RefSeq	CDS	167813	170056	.	+	0	ID=cds147;Parent=gene160;Dbxref=Genbank:YP_401888.1,GeneID:3795797;Name=YP_401888.1;Note=involved with the transport of ferrichrome across the outer membrane%3B binds the ferrichrome-iron ligand and interacts with the TonB protein;gbkey=CDS;gene=fhuA;product=ferrichrome outer membrane transporter;protein_id=YP_401888.1;transl_table=11
NC_007606.1	RefSeq	gene	170107	170904	.	+	.	ID=gene161;Dbxref=GeneID:3795798;Name=fhuC;Note=SDY0167;gbkey=Gene;gene=fhuC;gene_biotype=protein_coding;locus_tag=SDY_0167
NC_007606.1	RefSeq	CDS	170107	170904	.	+	0	ID=cds148;Parent=gene161;Dbxref=Genbank:YP_401889.1,GeneID:3795798;Name=YP_401889.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter;gbkey=CDS;gene=fhuC;product=iron-hydroxamate ABC transporter ATP-binding protein;protein_id=YP_401889.1;transl_table=11
NC_007606.1	RefSeq	gene	170904	171794	.	+	.	ID=gene162;Dbxref=GeneID:3795799;Name=fhuD;Note=SDY0168;gbkey=Gene;gene=fhuD;gene_biotype=protein_coding;locus_tag=SDY_0168
NC_007606.1	RefSeq	CDS	170904	171794	.	+	0	ID=cds149;Parent=gene162;Dbxref=Genbank:YP_401890.1,GeneID:3795799;Name=YP_401890.1;Note=Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter%3B binds to all hydroxamate siderophores;gbkey=CDS;gene=fhuD;product=iron-hydroxamate ABC transporter substrate-binding protein;protein_id=YP_401890.1;transl_table=11
NC_007606.1	RefSeq	gene	171791	173773	.	+	.	ID=gene163;Dbxref=GeneID:3795800;Name=fhuB;Note=SDY0169;gbkey=Gene;gene=fhuB;gene_biotype=protein_coding;locus_tag=SDY_0169
NC_007606.1	RefSeq	CDS	171791	173773	.	+	0	ID=cds150;Parent=gene163;Dbxref=Genbank:YP_401891.1,GeneID:3795800;Name=YP_401891.1;Note=part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome;gbkey=CDS;gene=fhuB;product=iron-hydroxamate ABC transporter permease;protein_id=YP_401891.1;transl_table=11
NC_007606.1	RefSeq	gene	173808	175088	.	-	.	ID=gene164;Dbxref=GeneID:3795801;Name=hemL;Note=SDY0170;gbkey=Gene;gene=hemL;gene_biotype=protein_coding;locus_tag=SDY_0170
NC_007606.1	RefSeq	CDS	173808	175088	.	-	0	ID=cds151;Parent=gene164;Dbxref=Genbank:YP_401892.1,GeneID:3795801;Name=YP_401892.1;Note=Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway;gbkey=CDS;gene=hemL;product=glutamate-1-semialdehyde aminotransferase;protein_id=YP_401892.1;transl_table=11
NC_007606.1	RefSeq	gene	175313	176734	.	+	.	ID=gene165;Dbxref=GeneID:3795802;Name=yadQ;Note=SDY0171;gbkey=Gene;gene=yadQ;gene_biotype=protein_coding;locus_tag=SDY_0171
NC_007606.1	RefSeq	CDS	175313	176734	.	+	0	ID=cds152;Parent=gene165;Dbxref=Genbank:YP_401893.1,GeneID:3795802;Name=YP_401893.1;Note=Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation;gbkey=CDS;gene=yadQ;product=chloride channel protein;protein_id=YP_401893.1;transl_table=11
NC_007606.1	RefSeq	gene	176816	177160	.	+	.	ID=gene166;Dbxref=GeneID:3795803;Name=yadR;Note=SDY0172;gbkey=Gene;gene=yadR;gene_biotype=protein_coding;locus_tag=SDY_0172
NC_007606.1	RefSeq	CDS	176816	177160	.	+	0	ID=cds153;Parent=gene166;Dbxref=Genbank:YP_401894.1,GeneID:3795803;Name=YP_401894.1;Note=essential respiratory protein A%3B may be involved in the transfer of iron-sulfur clusters%3B essential for growth using oxygen or alternate electron acceptors;gbkey=CDS;gene=yadR;product=iron-sulfur cluster insertion protein ErpA;protein_id=YP_401894.1;transl_table=11
NC_007606.1	RefSeq	gene	177207	177830	.	-	.	ID=gene167;Dbxref=GeneID:3795804;Name=yadS;Note=SDY0173;gbkey=Gene;gene=yadS;gene_biotype=protein_coding;locus_tag=SDY_0173
NC_007606.1	RefSeq	CDS	177207	177830	.	-	0	ID=cds154;Parent=gene167;Dbxref=Genbank:YP_401895.1,GeneID:3795804;Name=YP_401895.1;Note=Code: S%3B COG: COG2860;gbkey=CDS;gene=yadS;product=hypothetical protein;protein_id=YP_401895.1;transl_table=11
NC_007606.1	RefSeq	gene	177868	178668	.	-	.	ID=gene168;Dbxref=GeneID:3795805;Name=yadT;Note=SDY0174;gbkey=Gene;gene=yadT;gene_biotype=protein_coding;locus_tag=SDY_0174
NC_007606.1	RefSeq	CDS	177868	178668	.	-	0	ID=cds155;Parent=gene168;Dbxref=Genbank:YP_401896.1,GeneID:3795805;Name=YP_401896.1;Note=solute binding component of the vitamin B12 transport system BtuCDF;gbkey=CDS;gene=yadT;product=vitamin B12-transporter protein BtuF;protein_id=YP_401896.1;transl_table=11
NC_007606.1	RefSeq	gene	178661	179359	.	-	.	ID=gene169;Dbxref=GeneID:3795806;Name=pfs;Note=SDY0175;gbkey=Gene;gene=pfs;gene_biotype=protein_coding;locus_tag=SDY_0175
NC_007606.1	RefSeq	CDS	178661	179359	.	-	0	ID=cds156;Parent=gene169;Dbxref=Genbank:YP_401897.1,GeneID:3795806;Name=YP_401897.1;Note=enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine;gbkey=CDS;gene=pfs;product=5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase;protein_id=YP_401897.1;transl_table=11
NC_007606.1	RefSeq	gene	179443	181734	.	+	.	ID=gene170;Dbxref=GeneID:3795807;Name=dgt;Note=SDY0176%3B contains iso-IS1 insertion%3B original product: deoxyguanosine triphosphate triphosphohydrolase;gbkey=Gene;gene=dgt;gene_biotype=pseudogene;locus_tag=SDY_0176;pseudo=true
NC_007606.1	RefSeq	region	180441	181206	.	+	.	ID=id16;Dbxref=GeneID:3795807;gbkey=mobile_element;gene=dgt
NC_007606.1	RefSeq	gene	180498	180770	.	+	.	ID=gene171;Dbxref=GeneID:18262941;Name=SDY_0177a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0177a
NC_007606.1	RefSeq	CDS	180498	180770	.	+	0	ID=cds157;Parent=gene171;Dbxref=Genbank:YP_009000625.1,GeneID:18262941;Name=YP_009000625.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000625.1;transl_table=11
NC_007606.1	RefSeq	gene	180797	181192	.	+	.	ID=gene172;Dbxref=GeneID:3798524;Name=SDY_0177;Note=SDY0177;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0177
NC_007606.1	RefSeq	CDS	180797	181192	.	+	0	ID=cds158;Parent=gene172;Dbxref=Genbank:YP_401898.1,GeneID:3798524;Name=YP_401898.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_401898.1;transl_table=11
NC_007606.1	RefSeq	gene	181864	183288	.	+	.	ID=gene173;Dbxref=GeneID:3798525;Name=htrA;Note=SDY0178;gbkey=Gene;gene=htrA;gene_biotype=protein_coding;locus_tag=SDY_0178
NC_007606.1	RefSeq	CDS	181864	183288	.	+	0	ID=cds159;Parent=gene173;Dbxref=Genbank:YP_401899.1,GeneID:3798525;Name=YP_401899.1;Note=protease Do%3B required at high temperature%3B degrades damaged proteins;gbkey=CDS;gene=htrA;product=serine endoprotease;protein_id=YP_401899.1;transl_table=11
NC_007606.1	RefSeq	gene	183415	184596	.	+	.	ID=gene174;Dbxref=GeneID:3798526;Name=yaeG;Note=SDY0179;gbkey=Gene;gene=yaeG;gene_biotype=pseudogene;locus_tag=SDY_0179;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	184685	185071	.	-	.	ID=gene175;Dbxref=GeneID:3798528;Name=yaeH;Note=SDY0181;gbkey=Gene;gene=yaeH;gene_biotype=protein_coding;locus_tag=SDY_0181
NC_007606.1	RefSeq	CDS	184685	185071	.	-	0	ID=cds160;Parent=gene175;Dbxref=Genbank:YP_401902.1,GeneID:3798528;Name=YP_401902.1;gbkey=CDS;gene=yaeH;product=hypothetical protein;protein_id=YP_401902.1;transl_table=11
NC_007606.1	RefSeq	gene	185385	186209	.	-	.	ID=gene176;Dbxref=GeneID:3798529;Name=dapD;Note=SDY0182;gbkey=Gene;gene=dapD;gene_biotype=protein_coding;locus_tag=SDY_0182
NC_007606.1	RefSeq	CDS	185385	186209	.	-	0	ID=cds161;Parent=gene176;Dbxref=Genbank:YP_401903.1,GeneID:3798529;Name=YP_401903.1;Note=catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway;gbkey=CDS;gene=dapD;product=2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-carboxylate N-succinyltransferase;protein_id=YP_401903.1;transl_table=11
NC_007606.1	RefSeq	gene	186240	188912	.	-	.	ID=gene177;Dbxref=GeneID:3798530;Name=glnD;Note=SDY0183;gbkey=Gene;gene=glnD;gene_biotype=protein_coding;locus_tag=SDY_0183
NC_007606.1	RefSeq	CDS	186240	188912	.	-	0	ID=cds162;Parent=gene177;Dbxref=Genbank:YP_401904.1,GeneID:3798530;Name=YP_401904.1;Note=catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein;gbkey=CDS;gene=glnD;product=PII uridylyl-transferase;protein_id=YP_401904.1;transl_table=11
NC_007606.1	RefSeq	gene	188974	189768	.	-	.	ID=gene178;Dbxref=GeneID:3798531;Name=map;Note=SDY0184;gbkey=Gene;gene=map;gene_biotype=protein_coding;locus_tag=SDY_0184
NC_007606.1	RefSeq	CDS	188974	189768	.	-	0	ID=cds163;Parent=gene178;Dbxref=Genbank:YP_401905.1,GeneID:3798531;Name=YP_401905.1;Note=''catalyzes the removal of N-terminal amino acids from peptides and arylamides%3B generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn%2C Fe%2C or Mn'';gbkey=CDS;gene=map;product=methionine aminopeptidase;protein_id=YP_401905.1;transl_table=11
NC_007606.1	RefSeq	gene	190136	190861	.	+	.	ID=gene179;Dbxref=GeneID:3798532;Name=rpsB;Note=SDY0185;gbkey=Gene;gene=rpsB;gene_biotype=protein_coding;locus_tag=SDY_0185
NC_007606.1	RefSeq	CDS	190136	190861	.	+	0	ID=cds164;Parent=gene179;Dbxref=Genbank:YP_401906.1,GeneID:3798532;Name=YP_401906.1;Note=one of the last subunits in the assembly of the 30S subunit%3B absence of S2 does not inhibit assembly but results in an inactive subunit;gbkey=CDS;gene=rpsB;product=30S ribosomal protein S2;protein_id=YP_401906.1;transl_table=11
NC_007606.1	RefSeq	gene	191119	191970	.	+	.	ID=gene180;Dbxref=GeneID:3798533;Name=tsf;Note=SDY0186;gbkey=Gene;gene=tsf;gene_biotype=protein_coding;locus_tag=SDY_0186
NC_007606.1	RefSeq	CDS	191119	191970	.	+	0	ID=cds165;Parent=gene180;Dbxref=Genbank:YP_401907.1,GeneID:3798533;Name=YP_401907.1;Note=EF-Ts%3B functions during elongation stage of protein translation%3B forms a dimer%3B associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu;gbkey=CDS;gene=tsf;product=elongation factor Ts;protein_id=YP_401907.1;transl_table=11
NC_007606.1	RefSeq	gene	192117	192842	.	+	.	ID=gene181;Dbxref=GeneID:3798534;Name=pyrH;Note=SDY0187;gbkey=Gene;gene=pyrH;gene_biotype=protein_coding;locus_tag=SDY_0187
NC_007606.1	RefSeq	CDS	192117	192842	.	+	0	ID=cds166;Parent=gene181;Dbxref=Genbank:YP_401908.1,GeneID:3798534;Name=YP_401908.1;Note=Catalyzes the phosphorylation of UMP to UDP;gbkey=CDS;gene=pyrH;product=uridylate kinase;protein_id=YP_401908.1;transl_table=11
NC_007606.1	RefSeq	gene	193134	193691	.	+	.	ID=gene182;Dbxref=GeneID:3798535;Name=frr;Note=SDY0188;gbkey=Gene;gene=frr;gene_biotype=protein_coding;locus_tag=SDY_0188
NC_007606.1	RefSeq	CDS	193134	193691	.	+	0	ID=cds167;Parent=gene182;Dbxref=Genbank:YP_401909.1,GeneID:3798535;Name=YP_401909.1;Note=Rrf%3B Frr%3B ribosome-recycling factor%3B release factor 4%3B RF4%3B recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G%3B A GTPase-dependent process results in release of 50S from 70S%3B inhibited by release factor RF-1%3B essential for viability%3B structurally similar to tRNAs;gbkey=CDS;gene=frr;product=ribosome recycling factor;protein_id=YP_401909.1;transl_table=11
NC_007606.1	RefSeq	gene	193783	194979	.	+	.	ID=gene183;Dbxref=GeneID:3798536;Name=yaeM;Note=SDY0189;gbkey=Gene;gene=yaeM;gene_biotype=protein_coding;locus_tag=SDY_0189
NC_007606.1	RefSeq	CDS	193783	194979	.	+	0	ID=cds168;Parent=gene183;Dbxref=Genbank:YP_401910.1,GeneID:3798536;Name=YP_401910.1;Note=catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate;gbkey=CDS;gene=yaeM;product=1-deoxy-D-xylulose 5-phosphate reductoisomerase;protein_id=YP_401910.1;transl_table=11
NC_007606.1	RefSeq	gene	195165	195926	.	+	.	ID=gene184;Dbxref=GeneID:3798537;Name=yaeS;Note=SDY0190;gbkey=Gene;gene=yaeS;gene_biotype=protein_coding;locus_tag=SDY_0190
NC_007606.1	RefSeq	CDS	195165	195926	.	+	0	ID=cds169;Parent=gene184;Dbxref=Genbank:YP_401911.1,GeneID:3798537;Name=YP_401911.1;Note=catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate;gbkey=CDS;gene=yaeS;product=undecaprenyl pyrophosphate synthase;protein_id=YP_401911.1;transl_table=11
NC_007606.1	RefSeq	gene	195939	196796	.	+	.	ID=gene185;Dbxref=GeneID:3798538;Name=cdsA;Note=SDY0191;gbkey=Gene;gene=cdsA;gene_biotype=protein_coding;locus_tag=SDY_0191
NC_007606.1	RefSeq	CDS	195939	196796	.	+	0	ID=cds170;Parent=gene185;Dbxref=Genbank:YP_401912.2,GeneID:3798538;Name=YP_401912.2;Note=catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate;gbkey=CDS;gene=cdsA;product=CDP-diglyceride synthase;protein_id=YP_401912.2;transl_table=11
NC_007606.1	RefSeq	gene	196808	198160	.	+	.	ID=gene186;Dbxref=GeneID:3798539;Name=yaeL;Note=SDY0192;gbkey=Gene;gene=yaeL;gene_biotype=protein_coding;locus_tag=SDY_0192
NC_007606.1	RefSeq	CDS	196808	198160	.	+	0	ID=cds171;Parent=gene186;Dbxref=Genbank:YP_401913.1,GeneID:3798539;Name=YP_401913.1;Note=catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response;gbkey=CDS;gene=yaeL;product=zinc metallopeptidase RseP;protein_id=YP_401913.1;transl_table=11
NC_007606.1	RefSeq	gene	198190	200622	.	+	.	ID=gene187;Dbxref=GeneID:3798540;Name=yaeT;Note=SDY0193;gbkey=Gene;gene=yaeT;gene_biotype=protein_coding;locus_tag=SDY_0193
NC_007606.1	RefSeq	CDS	198190	200622	.	+	0	ID=cds172;Parent=gene187;Dbxref=Genbank:YP_401914.1,GeneID:3798540;Name=YP_401914.1;Note=''part of a complex with YfgL%2C YfiO%2C and NlpB involved in outer membrane protein biosynthesis%3B involved in the assembly of outer membrane proteins'';gbkey=CDS;gene=yaeT;product=outer membrane protein assembly factor YaeT;protein_id=YP_401914.1;transl_table=11
NC_007606.1	RefSeq	gene	200744	201229	.	+	.	ID=gene188;Dbxref=GeneID:3798541;Name=hlpA;Note=SDY0194;gbkey=Gene;gene=hlpA;gene_biotype=protein_coding;locus_tag=SDY_0194
NC_007606.1	RefSeq	CDS	200744	201229	.	+	0	ID=cds173;Parent=gene188;Dbxref=Genbank:YP_401915.1,GeneID:3798541;Name=YP_401915.1;Note=Code: M%3B COG: COG2825;gbkey=CDS;gene=hlpA;product=periplasmic chaperone;protein_id=YP_401915.1;transl_table=11
NC_007606.1	RefSeq	gene	201233	202258	.	+	.	ID=gene189;Dbxref=GeneID:3798542;Name=lpxD;Note=SDY0195;gbkey=Gene;gene=lpxD;gene_biotype=protein_coding;locus_tag=SDY_0195
NC_007606.1	RefSeq	CDS	201233	202258	.	+	0	ID=cds174;Parent=gene189;Dbxref=Genbank:YP_401916.1,GeneID:3798542;Name=YP_401916.1;Note=adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis;gbkey=CDS;gene=lpxD;product=UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase;protein_id=YP_401916.1;transl_table=11
NC_007606.1	RefSeq	gene	202363	202818	.	+	.	ID=gene190;Dbxref=GeneID:3798543;Name=fabZ;Note=SDY0196;gbkey=Gene;gene=fabZ;gene_biotype=protein_coding;locus_tag=SDY_0196
NC_007606.1	RefSeq	CDS	202363	202818	.	+	0	ID=cds175;Parent=gene190;Dbxref=Genbank:YP_401917.1,GeneID:3798543;Name=YP_401917.1;Note=in Pseudomonas aeruginosa this enzyme is a trimer of dimers%3B essential for membrane formation%3B performs third step of type II fatty acid biosynthesis%3B catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP;gbkey=CDS;gene=fabZ;product=(3R)-hydroxymyristoyl-ACP dehydratase;protein_id=YP_401917.1;transl_table=11
NC_007606.1	RefSeq	gene	202822	203610	.	+	.	ID=gene191;Dbxref=GeneID:3795730;Name=lpxA;Note=SDY0197;gbkey=Gene;gene=lpxA;gene_biotype=protein_coding;locus_tag=SDY_0197
NC_007606.1	RefSeq	CDS	202822	203610	.	+	0	ID=cds176;Parent=gene191;Dbxref=Genbank:YP_401918.1,GeneID:3795730;Name=YP_401918.1;Note=catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis;gbkey=CDS;gene=lpxA;product=UDP-N-acetylglucosamine acyltransferase;protein_id=YP_401918.1;transl_table=11
NC_007606.1	RefSeq	gene	203610	204758	.	+	.	ID=gene192;Dbxref=GeneID:3795731;Name=lpxB;Note=SDY0198;gbkey=Gene;gene=lpxB;gene_biotype=protein_coding;locus_tag=SDY_0198
NC_007606.1	RefSeq	CDS	203610	204758	.	+	0	ID=cds177;Parent=gene192;Dbxref=Genbank:YP_401919.1,GeneID:3795731;Name=YP_401919.1;Note=''catalyzes the formation of lipid A disaccharide from UDP-2%2C3-diacylglucosamine and 2%2C3-diacylglucosamine-1-phosphate%2C lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM'';gbkey=CDS;gene=lpxB;product=lipid-A-disaccharide synthase;protein_id=YP_401919.1;transl_table=11
NC_007606.1	RefSeq	gene	204755	205351	.	+	.	ID=gene193;Dbxref=GeneID:3795732;Name=rnhB;Note=SDY0199;gbkey=Gene;gene=rnhB;gene_biotype=protein_coding;locus_tag=SDY_0199
NC_007606.1	RefSeq	CDS	204755	205351	.	+	0	ID=cds178;Parent=gene193;Dbxref=Genbank:YP_401920.1,GeneID:3795732;Name=YP_401920.1;Note=RNH2%3B RNase HII%3B binds manganese%3B endonuclease which specifically degrades the RNA of RNA-DNA hybrids;gbkey=CDS;gene=rnhB;product=ribonuclease HII;protein_id=YP_401920.1;transl_table=11
NC_007606.1	RefSeq	gene	205388	208870	.	+	.	ID=gene194;Dbxref=GeneID:3795733;Name=dnaE;Note=SDY0200;gbkey=Gene;gene=dnaE;gene_biotype=protein_coding;locus_tag=SDY_0200
NC_007606.1	RefSeq	CDS	205388	208870	.	+	0	ID=cds179;Parent=gene194;Dbxref=Genbank:YP_401921.1,GeneID:3795733;Name=YP_401921.1;Note=catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time%3B main replicative polymerase;gbkey=CDS;gene=dnaE;product=DNA polymerase III subunit alpha;protein_id=YP_401921.1;transl_table=11
NC_007606.1	RefSeq	gene	208883	209842	.	+	.	ID=gene195;Dbxref=GeneID:3795734;Name=accA;Note=SDY0201;gbkey=Gene;gene=accA;gene_biotype=protein_coding;locus_tag=SDY_0201
NC_007606.1	RefSeq	CDS	208883	209842	.	+	0	ID=cds180;Parent=gene195;Dbxref=Genbank:YP_401922.1,GeneID:3795734;Name=YP_401922.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits%3B one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein;gbkey=CDS;gene=accA;product=acetyl-CoA carboxylase carboxyltransferase subunit alpha;protein_id=YP_401922.1;transl_table=11
NC_007606.1	RefSeq	region	210099	210866	.	+	.	ID=id17;gbkey=mobile_element
NC_007606.1	RefSeq	gene	210154	210429	.	+	.	ID=gene196;Dbxref=GeneID:3795735;Name=insA;Note=SDY0202;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0202
NC_007606.1	RefSeq	CDS	210154	210429	.	+	0	ID=cds181;Parent=gene196;Dbxref=Genbank:YP_401923.1,GeneID:3795735;Name=YP_401923.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_401923.1;transl_table=11
NC_007606.1	RefSeq	gene	210474	210851	.	+	.	ID=gene197;Dbxref=GeneID:3795736;Name=insB;Note=SDY0203;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0203
NC_007606.1	RefSeq	CDS	210474	210851	.	+	0	ID=cds182;Parent=gene197;Dbxref=Genbank:YP_401924.1,GeneID:3795736;Name=YP_401924.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_401924.1;transl_table=11
NC_007606.1	RefSeq	gene	210879	212859	.	+	.	ID=gene198;Dbxref=GeneID:3795737;Name=ldcC;Note=''SDY0204%3B frameshift and contains in-frame stop codon%3B original product: lysine decarboxylase 2%2C constitutive'';gbkey=Gene;gene=ldcC;gene_biotype=pseudogene;locus_tag=SDY_0204;pseudo=true
NC_007606.1	RefSeq	gene	212959	213291	.	+	.	ID=gene199;Dbxref=GeneID:3795738;Name=yaeR;Note=SDY0205;gbkey=Gene;gene=yaeR;gene_biotype=protein_coding;locus_tag=SDY_0205
NC_007606.1	RefSeq	CDS	212959	213291	.	+	0	ID=cds183;Parent=gene199;Dbxref=Genbank:YP_401925.1,GeneID:3795738;Name=YP_401925.1;Note=Code: E%3B COG: COG0346;gbkey=CDS;gene=yaeR;product=hypothetical protein;protein_id=YP_401925.1;transl_table=11
NC_007606.1	RefSeq	gene	213359	214654	.	+	.	ID=gene200;Dbxref=GeneID:3795739;Name=tilS;Note=SDY0206;gbkey=Gene;gene=tilS;gene_biotype=protein_coding;locus_tag=SDY_0206
NC_007606.1	RefSeq	CDS	213359	214654	.	+	0	ID=cds184;Parent=gene200;Dbxref=Genbank:YP_401926.1,GeneID:3795739;Name=YP_401926.1;Note=Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU%3B ATP-dependent%3B responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase;gbkey=CDS;gene=tilS;product=tRNA(Ile)-lysidine synthetase;protein_id=YP_401926.1;transl_table=11
NC_007606.1	RefSeq	gene	214707	214967	.	-	.	ID=gene201;Dbxref=GeneID:3795740;Name=yaeO;Note=SDY0207;gbkey=Gene;gene=yaeO;gene_biotype=protein_coding;locus_tag=SDY_0207
NC_007606.1	RefSeq	CDS	214707	214967	.	-	0	ID=cds185;Parent=gene201;Dbxref=Genbank:YP_401927.1,GeneID:3795740;Name=YP_401927.1;Note=Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination;gbkey=CDS;gene=yaeO;product=Rho-binding antiterminator;protein_id=YP_401927.1;transl_table=11
NC_007606.1	RefSeq	gene	214954	215172	.	-	.	ID=gene202;Dbxref=GeneID:3795741;Name=yaeP;Note=SDY0208;gbkey=Gene;gene=yaeP;gene_biotype=protein_coding;locus_tag=SDY_0208
NC_007606.1	RefSeq	CDS	214954	215172	.	-	0	ID=cds186;Parent=gene202;Dbxref=Genbank:YP_401928.1,GeneID:3795741;Name=YP_401928.1;gbkey=CDS;gene=yaeP;product=hypothetical protein;protein_id=YP_401928.1;transl_table=11
NC_007606.1	RefSeq	gene	215320	215865	.	+	.	ID=gene203;Dbxref=GeneID:3795742;Name=yaeQ;Note=SDY0209;gbkey=Gene;gene=yaeQ;gene_biotype=protein_coding;locus_tag=SDY_0209
NC_007606.1	RefSeq	CDS	215320	215865	.	+	0	ID=cds187;Parent=gene203;Dbxref=Genbank:YP_401929.1,GeneID:3795742;Name=YP_401929.1;Note=Code: S%3B COG: COG4681;gbkey=CDS;gene=yaeQ;product=hypothetical protein;protein_id=YP_401929.1;transl_table=11
NC_007606.1	RefSeq	gene	215862	216284	.	+	.	ID=gene204;Dbxref=GeneID:3795743;Name=yaeJ;Note=SDY0210;gbkey=Gene;gene=yaeJ;gene_biotype=protein_coding;locus_tag=SDY_0210
NC_007606.1	RefSeq	CDS	215862	216284	.	+	0	ID=cds188;Parent=gene204;Dbxref=Genbank:YP_401930.1,GeneID:3795743;Name=YP_401930.1;Note=Code: J%3B COG: COG1186;gbkey=CDS;gene=yaeJ;product=peptidyl-tRNA hydrolase domain-containing protein;protein_id=YP_401930.1;transl_table=11
NC_007606.1	RefSeq	gene	216298	217008	.	+	.	ID=gene205;Dbxref=GeneID:3795744;Name=cutF;Note=SDY0211;gbkey=Gene;gene=cutF;gene_biotype=protein_coding;locus_tag=SDY_0211
NC_007606.1	RefSeq	CDS	216298	217008	.	+	0	ID=cds189;Parent=gene205;Dbxref=Genbank:YP_401931.1,GeneID:3795744;Name=YP_401931.1;Note=Code: MP%3B COG: COG3015;gbkey=CDS;gene=cutF;product=copper homeostasis and adhesion lipoprotein;protein_id=YP_401931.1;transl_table=11
NC_007606.1	RefSeq	gene	217152	217976	.	-	.	ID=gene206;Dbxref=GeneID:3795745;Name=yaeF;Note=SDY0212;gbkey=Gene;gene=yaeF;gene_biotype=protein_coding;locus_tag=SDY_0212
NC_007606.1	RefSeq	CDS	217152	217976	.	-	0	ID=cds190;Parent=gene206;Dbxref=Genbank:YP_401932.1,GeneID:3795745;Name=YP_401932.1;gbkey=CDS;gene=yaeF;product=hypothetical protein;protein_id=YP_401932.1;transl_table=11
NC_007606.1	RefSeq	gene	218029	219747	.	-	.	ID=gene207;Dbxref=GeneID:3795746;Name=proS;Note=SDY0213;gbkey=Gene;gene=proS;gene_biotype=protein_coding;locus_tag=SDY_0213
NC_007606.1	RefSeq	CDS	218029	219747	.	-	0	ID=cds191;Parent=gene207;Dbxref=Genbank:YP_401933.1,GeneID:3795746;Name=YP_401933.1;Note=catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro);gbkey=CDS;gene=proS;product=prolyl-tRNA synthetase;protein_id=YP_401933.1;transl_table=11
NC_007606.1	RefSeq	gene	219858	220565	.	-	.	ID=gene208;Dbxref=GeneID:3795747;Name=yaeB;Note=SDY0214;gbkey=Gene;gene=yaeB;gene_biotype=protein_coding;locus_tag=SDY_0214
NC_007606.1	RefSeq	CDS	219858	220565	.	-	0	ID=cds192;Parent=gene208;Dbxref=Genbank:YP_401934.1,GeneID:3795747;Name=YP_401934.1;Note=Code: S%3B COG: COG1720;gbkey=CDS;gene=yaeB;product=hypothetical protein;protein_id=YP_401934.1;transl_table=11
NC_007606.1	RefSeq	gene	220562	220966	.	-	.	ID=gene209;Dbxref=GeneID:3795748;Name=rcsF;Note=SDY0215;gbkey=Gene;gene=rcsF;gene_biotype=protein_coding;locus_tag=SDY_0215
NC_007606.1	RefSeq	CDS	220562	220966	.	-	0	ID=cds193;Parent=gene209;Dbxref=Genbank:YP_401935.1,GeneID:3795748;Name=YP_401935.1;gbkey=CDS;gene=rcsF;product=outer membrane lipoprotein;protein_id=YP_401935.1;transl_table=11
NC_007606.1	RefSeq	gene	221084	221899	.	-	.	ID=gene210;Dbxref=GeneID:3797846;Name=metQ;Note=SDY0216;gbkey=Gene;gene=metQ;gene_biotype=protein_coding;locus_tag=SDY_0216
NC_007606.1	RefSeq	CDS	221084	221899	.	-	0	ID=cds194;Parent=gene210;Dbxref=Genbank:YP_401936.1,GeneID:3797846;Name=YP_401936.1;Note=Code: P%3B COG: COG1464;gbkey=CDS;gene=metQ;product=DL-methionine ABC transporter substrate-binding protein;protein_id=YP_401936.1;transl_table=11
NC_007606.1	RefSeq	gene	221939	222592	.	-	.	ID=gene211;Dbxref=GeneID:3797847;Name=yaeE;Note=SDY0217;gbkey=Gene;gene=yaeE;gene_biotype=protein_coding;locus_tag=SDY_0217
NC_007606.1	RefSeq	CDS	221939	222592	.	-	0	ID=cds195;Parent=gene211;Dbxref=Genbank:YP_401937.1,GeneID:3797847;Name=YP_401937.1;Note=part of the MetNIQ methionine uptake system;gbkey=CDS;gene=yaeE;product=DL-methionine ABC transporter permease;protein_id=YP_401937.1;transl_table=11
NC_007606.1	RefSeq	gene	222585	223616	.	-	.	ID=gene212;Dbxref=GeneID:3797848;Name=metN;Note=SDY0218;gbkey=Gene;gene=metN;gene_biotype=protein_coding;locus_tag=SDY_0218
NC_007606.1	RefSeq	CDS	222585	223616	.	-	0	ID=cds196;Parent=gene212;Dbxref=Genbank:YP_401938.1,GeneID:3797848;Name=YP_401938.1;Note=part of the metNIQ transport system for methionine;gbkey=CDS;gene=metN;product=DL-methionine ABC transporter ATP-binding protein;protein_id=YP_401938.1;transl_table=11
NC_007606.1	RefSeq	gene	223804	224376	.	+	.	ID=gene213;Dbxref=GeneID:3797849;Name=yaeD;Note=SDY0219;gbkey=Gene;gene=yaeD;gene_biotype=protein_coding;locus_tag=SDY_0219
NC_007606.1	RefSeq	CDS	223804	224376	.	+	0	ID=cds197;Parent=gene213;Dbxref=Genbank:YP_401939.1,GeneID:3797849;Name=YP_401939.1;Note=''Converts the D-glycero-beta-D-manno-heptose 1%2C7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate'';gbkey=CDS;gene=yaeD;product=D%2CD-heptose 1%2C7-bisphosphate phosphatase;protein_id=YP_401939.1;transl_table=11
NC_007606.1	RefSeq	gene	224744	226285	.	+	.	ID=gene214;Dbxref=GeneID:3797850;Name=rrsH;Note=SDY0220;gbkey=Gene;gene=rrsH;gene_biotype=rRNA;locus_tag=SDY_0220
NC_007606.1	RefSeq	rRNA	224744	226285	.	+	.	ID=rna0;Parent=gene214;Dbxref=GeneID:3797850;gbkey=rRNA;gene=rrsH;product=16S ribosomal RNA
NC_007606.1	RefSeq	exon	224744	226285	.	+	.	ID=id18;Parent=rna0;Dbxref=GeneID:3797850;gbkey=rRNA;gene=rrsH;product=16S ribosomal RNA
NC_007606.1	RefSeq	gene	226354	226430	.	+	.	ID=gene215;Dbxref=GeneID:3797851;Name=SDY_0221;Note=SDY0221;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0221
NC_007606.1	RefSeq	tRNA	226354	226430	.	+	.	ID=rna1;Parent=gene215;Dbxref=GeneID:3797851;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_007606.1	RefSeq	exon	226354	226430	.	+	.	ID=id19;Parent=rna1;Dbxref=GeneID:3797851;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_007606.1	RefSeq	gene	226473	226548	.	+	.	ID=gene216;Dbxref=GeneID:3797852;Name=SDY_0222;Note=SDY0222;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0222
NC_007606.1	RefSeq	tRNA	226473	226548	.	+	.	ID=rna2;Parent=gene216;Dbxref=GeneID:3797852;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_007606.1	RefSeq	exon	226473	226548	.	+	.	ID=id20;Parent=rna2;Dbxref=GeneID:3797852;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_007606.1	RefSeq	gene	226723	229624	.	+	.	ID=gene217;Dbxref=GeneID:3797853;Name=rrlH;Note=SDY0223;gbkey=Gene;gene=rrlH;gene_biotype=rRNA;locus_tag=SDY_0223
NC_007606.1	RefSeq	rRNA	226723	229624	.	+	.	ID=rna3;Parent=gene217;Dbxref=GeneID:3797853;gbkey=rRNA;gene=rrlH;product=23S ribosomal RNA
NC_007606.1	RefSeq	exon	226723	229624	.	+	.	ID=id21;Parent=rna3;Dbxref=GeneID:3797853;gbkey=rRNA;gene=rrlH;product=23S ribosomal RNA
NC_007606.1	RefSeq	gene	229718	229836	.	+	.	ID=gene218;Dbxref=GeneID:3797854;Name=rrfH;Note=SDY0224;gbkey=Gene;gene=rrfH;gene_biotype=rRNA;locus_tag=SDY_0224
NC_007606.1	RefSeq	rRNA	229718	229836	.	+	.	ID=rna4;Parent=gene218;Dbxref=GeneID:3797854;gbkey=rRNA;gene=rrfH;product=5S ribosomal RNA
NC_007606.1	RefSeq	exon	229718	229836	.	+	.	ID=id22;Parent=rna4;Dbxref=GeneID:3797854;gbkey=rRNA;gene=rrfH;product=5S ribosomal RNA
NC_007606.1	RefSeq	gene	229889	229965	.	+	.	ID=gene219;Dbxref=GeneID:3797855;Name=SDY_0225;Note=SDY0225;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0225
NC_007606.1	RefSeq	tRNA	229889	229965	.	+	.	ID=rna5;Parent=gene219;Dbxref=GeneID:3797855;codons=57;gbkey=tRNA;product=tRNA-Asp
NC_007606.1	RefSeq	exon	229889	229965	.	+	.	ID=id23;Parent=rna5;Dbxref=GeneID:3797855;codons=57;gbkey=tRNA;product=tRNA-Asp
NC_007606.1	RefSeq	gene	230128	230895	.	+	.	ID=gene220;Dbxref=GeneID:3797856;Name=dkgB;Note=SDY0226;gbkey=Gene;gene=dkgB;gene_biotype=protein_coding;locus_tag=SDY_0226
NC_007606.1	RefSeq	CDS	230128	230895	.	+	0	ID=cds198;Parent=gene220;Dbxref=Genbank:YP_401940.1,GeneID:3797856;Name=YP_401940.1;Note=''catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid'';gbkey=CDS;gene=dkgB;product=2%2C5-diketo-D-gluconate reductase B;protein_id=YP_401940.1;transl_table=11
NC_007606.1	RefSeq	gene	230927	231841	.	-	.	ID=gene221;Dbxref=GeneID:3797857;Name=yafC;Note=SDY0227;gbkey=Gene;gene=yafC;gene_biotype=protein_coding;locus_tag=SDY_0227
NC_007606.1	RefSeq	CDS	230927	231841	.	-	0	ID=cds199;Parent=gene221;Dbxref=Genbank:YP_401941.1,GeneID:3797857;Name=YP_401941.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=yafC;product=LysR family transcriptional regulator;protein_id=YP_401941.1;transl_table=11
NC_007606.1	RefSeq	gene	232082	232882	.	+	.	ID=gene222;Dbxref=GeneID:3797858;Name=yafD;Note=SDY0228;gbkey=Gene;gene=yafD;gene_biotype=protein_coding;locus_tag=SDY_0228
NC_007606.1	RefSeq	CDS	232082	232882	.	+	0	ID=cds200;Parent=gene222;Dbxref=Genbank:YP_401942.1,GeneID:3797858;Name=YP_401942.1;Note=Code: S%3B COG: COG3021;gbkey=CDS;gene=yafD;product=hypothetical protein;protein_id=YP_401942.1;transl_table=11
NC_007606.1	RefSeq	gene	232960	233714	.	+	.	ID=gene223;Dbxref=GeneID:3797859;Name=yafE;Note=SDY0229;gbkey=Gene;gene=yafE;gene_biotype=pseudogene;locus_tag=SDY_0229;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	233762	235120	.	-	.	ID=gene224;Dbxref=GeneID:3796958;Name=mltD;Note=SDY0230;gbkey=Gene;gene=mltD;gene_biotype=protein_coding;locus_tag=SDY_0230
NC_007606.1	RefSeq	CDS	233762	235120	.	-	0	ID=cds201;Parent=gene224;Dbxref=Genbank:YP_401944.1,GeneID:3796958;Name=YP_401944.1;Note=''catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues%3B may play a role in recycling muropeptides during cell division and/or cell elongation%3B in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall'';gbkey=CDS;gene=mltD;product=membrane-bound lytic murein transglycosylase D;protein_id=YP_401944.1;transl_table=11
NC_007606.1	RefSeq	gene	235192	235947	.	-	.	ID=gene225;Dbxref=GeneID:3796959;Name=gloB;Note=SDY0231;gbkey=Gene;gene=gloB;gene_biotype=protein_coding;locus_tag=SDY_0231
NC_007606.1	RefSeq	CDS	235192	235947	.	-	0	ID=cds202;Parent=gene225;Dbxref=Genbank:YP_401945.1,GeneID:3796959;Name=YP_401945.1;Note=catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione%3B plays an important role in cellular detoxification using glutathione;gbkey=CDS;gene=gloB;product=hydroxyacylglutathione hydrolase;protein_id=YP_401945.1;transl_table=11
NC_007606.1	RefSeq	gene	235963	236703	.	+	.	ID=gene226;Dbxref=GeneID:3796960;Name=yafS;Note=SDY0232;gbkey=Gene;gene=yafS;gene_biotype=protein_coding;locus_tag=SDY_0232
NC_007606.1	RefSeq	CDS	235963	236703	.	+	0	ID=cds203;Parent=gene226;Dbxref=Genbank:YP_401946.1,GeneID:3796960;Name=YP_401946.1;Note=Code: QR%3B COG: COG0500;gbkey=CDS;gene=yafS;product=hypothetical protein;protein_id=YP_401946.1;transl_table=11
NC_007606.1	RefSeq	gene	236700	237167	.	-	.	ID=gene227;Dbxref=GeneID:3796961;Name=rnhA;Note=SDY0233;gbkey=Gene;gene=rnhA;gene_biotype=protein_coding;locus_tag=SDY_0233
NC_007606.1	RefSeq	CDS	236700	237167	.	-	0	ID=cds204;Parent=gene227;Dbxref=Genbank:YP_401947.1,GeneID:3796961;Name=YP_401947.1;Note=An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids;gbkey=CDS;gene=rnhA;product=ribonuclease H;protein_id=YP_401947.1;transl_table=11
NC_007606.1	RefSeq	gene	237232	237963	.	+	.	ID=gene228;Dbxref=GeneID:3796962;Name=dnaQ;Note=SDY0234;gbkey=Gene;gene=dnaQ;gene_biotype=protein_coding;locus_tag=SDY_0234
NC_007606.1	RefSeq	CDS	237232	237963	.	+	0	ID=cds205;Parent=gene228;Dbxref=Genbank:YP_401948.1,GeneID:3796962;Name=YP_401948.1;Note=3'-5' exonuclease of DNA polymerase III;gbkey=CDS;gene=dnaQ;product=DNA polymerase III subunit epsilon;protein_id=YP_401948.1;transl_table=11
NC_007606.1	RefSeq	gene	238096	238172	.	+	.	ID=gene229;Dbxref=GeneID:3796963;Name=SDY_0235;Note=SDY0235;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0235
NC_007606.1	RefSeq	tRNA	238096	238172	.	+	.	ID=rna6;Parent=gene229;Dbxref=GeneID:3796963;codons=57;gbkey=tRNA;product=tRNA-Asp
NC_007606.1	RefSeq	exon	238096	238172	.	+	.	ID=id24;Parent=rna6;Dbxref=GeneID:3796963;codons=57;gbkey=tRNA;product=tRNA-Asp
NC_007606.1	RefSeq	region	238389	239156	.	-	.	ID=id25;gbkey=mobile_element
NC_007606.1	RefSeq	gene	238404	238781	.	-	.	ID=gene230;Dbxref=GeneID:3796964;Name=insB;Note=SDY0236;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0236
NC_007606.1	RefSeq	CDS	238404	238781	.	-	0	ID=cds206;Parent=gene230;Dbxref=Genbank:YP_401949.1,GeneID:3796964;Name=YP_401949.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_401949.1;transl_table=11
NC_007606.1	RefSeq	gene	238826	239101	.	-	.	ID=gene231;Dbxref=GeneID:3796965;Name=insA;Note=SDY0237;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0237
NC_007606.1	RefSeq	CDS	238826	239101	.	-	0	ID=cds207;Parent=gene231;Dbxref=Genbank:YP_401950.1,GeneID:3796965;Name=YP_401950.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_401950.1;transl_table=11
NC_007606.1	RefSeq	gene	239152	239412	.	-	.	ID=gene232;Dbxref=GeneID:3796966;Name=SDY_0238;Note=SDY0238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0238
NC_007606.1	RefSeq	CDS	239152	239412	.	-	0	ID=cds208;Parent=gene232;Dbxref=Genbank:YP_401951.1,GeneID:3796966;Name=YP_401951.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_401951.1;transl_table=11
NC_007606.1	RefSeq	region	239536	240300	.	-	.	ID=id26;gbkey=mobile_element
NC_007606.1	RefSeq	gene	239971	240243	.	-	.	ID=gene233;Dbxref=GeneID:18262942;Name=SDY_0241a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0241a
NC_007606.1	RefSeq	CDS	239971	240243	.	-	0	ID=cds209;Parent=gene233;Dbxref=Genbank:YP_009000626.1,GeneID:18262942;Name=YP_009000626.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000626.1;transl_table=11
NC_007606.1	RefSeq	region	241378	242150	.	+	.	ID=id27;gbkey=mobile_element
NC_007606.1	RefSeq	gene	241442	241714	.	+	.	ID=gene234;Dbxref=GeneID:18262943;Name=SDY0242a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY0242a
NC_007606.1	RefSeq	CDS	241442	241714	.	+	0	ID=cds210;Parent=gene234;Dbxref=Genbank:YP_009000627.1,GeneID:18262943;Name=YP_009000627.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000627.1;transl_table=11
NC_007606.1	RefSeq	gene	241741	242136	.	+	.	ID=gene235;Dbxref=GeneID:3796970;Name=SDY_0242;Note=SDY0242;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0242
NC_007606.1	RefSeq	CDS	241741	242136	.	+	0	ID=cds211;Parent=gene235;Dbxref=Genbank:YP_401955.2,GeneID:3796970;Name=YP_401955.2;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_401955.2;transl_table=11
NC_007606.1	RefSeq	gene	242153	243361	.	+	.	ID=gene236;Dbxref=GeneID:3796971;Name=SDY_0243;Note=SDY0243;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0243;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	243525	244295	.	-	.	ID=gene237;Dbxref=GeneID:3796973;Name=yafV;Note=SDY0245;gbkey=Gene;gene=yafV;gene_biotype=protein_coding;locus_tag=SDY_0245
NC_007606.1	RefSeq	CDS	243525	244295	.	-	0	ID=cds212;Parent=gene237;Dbxref=Genbank:YP_401958.1,GeneID:3796973;Name=YP_401958.1;Note=Code: R%3B COG: COG0388;gbkey=CDS;gene=yafV;product=hypothetical protein;protein_id=YP_401958.1;transl_table=11
NC_007606.1	RefSeq	gene	244449	244922	.	+	.	ID=gene238;Dbxref=GeneID:3796974;Name=ykfE;Note=SDY0246;gbkey=Gene;gene=ykfE;gene_biotype=protein_coding;locus_tag=SDY_0246
NC_007606.1	RefSeq	CDS	244449	244922	.	+	0	ID=cds213;Parent=gene238;Dbxref=Genbank:YP_401959.1,GeneID:3796974;Name=YP_401959.1;Note=inactivates vertebrate C-type lysozyme;gbkey=CDS;gene=ykfE;product=C-lysozyme inhibitor;protein_id=YP_401959.1;transl_table=11
NC_007606.1	RefSeq	gene	244965	247409	.	-	.	ID=gene239;Dbxref=GeneID:3796975;Name=yafH;Note=SDY0247%3B contains in-frame stop codon%3B original product:  acyl-CoA dehydrogenase (EC 1.3.99.-);gbkey=Gene;gene=yafH;gene_biotype=pseudogene;locus_tag=SDY_0247;pseudo=true
NC_007606.1	RefSeq	gene	247649	248227	.	+	.	ID=gene240;Dbxref=GeneID:3799596;Name=gmhA;Note=SDY0248;gbkey=Gene;gene=gmhA;gene_biotype=protein_coding;locus_tag=SDY_0248
NC_007606.1	RefSeq	CDS	247649	248227	.	+	0	ID=cds214;Parent=gene240;Dbxref=Genbank:YP_401960.1,GeneID:3799596;Name=YP_401960.1;Note=catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate;gbkey=CDS;gene=gmhA;product=phosphoheptose isomerase;protein_id=YP_401960.1;transl_table=11
NC_007606.1	RefSeq	gene	248433	249200	.	+	.	ID=gene241;Dbxref=GeneID:3799597;Name=yafJ;Note=SDY0249;gbkey=Gene;gene=yafJ;gene_biotype=protein_coding;locus_tag=SDY_0249
NC_007606.1	RefSeq	CDS	248433	249200	.	+	0	ID=cds215;Parent=gene241;Dbxref=Genbank:YP_401961.1,GeneID:3799597;Name=YP_401961.1;Note=Code: R%3B COG: COG0121;gbkey=CDS;gene=yafJ;product=amidotransferase;protein_id=YP_401961.1;transl_table=11
NC_007606.1	RefSeq	gene	249171	249911	.	-	.	ID=gene242;Dbxref=GeneID:3799598;Name=yafK;Note=SDY0250;gbkey=Gene;gene=yafK;gene_biotype=protein_coding;locus_tag=SDY_0250
NC_007606.1	RefSeq	CDS	249171	249911	.	-	0	ID=cds216;Parent=gene242;Dbxref=Genbank:YP_401962.1,GeneID:3799598;Name=YP_401962.1;Note=Code: S%3B COG: COG3034;gbkey=CDS;gene=yafK;product=hypothetical protein;protein_id=YP_401962.1;transl_table=11
NC_007606.1	RefSeq	gene	250067	250345	.	-	.	ID=gene243;Dbxref=GeneID:3799599;Name=yafQ;Note=SDY0251;gbkey=Gene;gene=yafQ;gene_biotype=protein_coding;locus_tag=SDY_0251
NC_007606.1	RefSeq	CDS	250067	250345	.	-	0	ID=cds217;Parent=gene243;Dbxref=Genbank:YP_401963.1,GeneID:3799599;Name=YP_401963.1;Note=Code: S%3B COG: COG3041;gbkey=CDS;gene=yafQ;product=hypothetical protein;protein_id=YP_401963.1;transl_table=11
NC_007606.1	RefSeq	gene	250348	250608	.	-	.	ID=gene244;Dbxref=GeneID:3799600;Name=dinJ;Note=SDY0252;gbkey=Gene;gene=dinJ;gene_biotype=protein_coding;locus_tag=SDY_0252
NC_007606.1	RefSeq	CDS	250348	250608	.	-	0	ID=cds218;Parent=gene244;Dbxref=Genbank:YP_401964.1,GeneID:3799600;Name=YP_401964.1;Note=Code: L%3B COG: COG3077;gbkey=CDS;gene=dinJ;product=damage-inducible protein J;protein_id=YP_401964.1;transl_table=11
NC_007606.1	RefSeq	gene	250818	251567	.	+	.	ID=gene245;Dbxref=GeneID:3799601;Name=yafL;Note=SDY0253;gbkey=Gene;gene=yafL;gene_biotype=protein_coding;locus_tag=SDY_0253
NC_007606.1	RefSeq	CDS	250818	251567	.	+	0	ID=cds219;Parent=gene245;Dbxref=Genbank:YP_401965.1,GeneID:3799601;Name=YP_401965.1;Note=Code: M%3B COG: COG0791;gbkey=CDS;gene=yafL;product=lipoprotein;protein_id=YP_401965.1;transl_table=11
NC_007606.1	RefSeq	gene	251743	252081	.	+	.	ID=gene246;Dbxref=GeneID:3799602;Name=yafM;Note=SDY0254;gbkey=Gene;gene=yafM;gene_biotype=protein_coding;locus_tag=SDY_0254
NC_007606.1	RefSeq	CDS	251743	252081	.	+	0	ID=cds220;Parent=gene246;Dbxref=Genbank:YP_401966.1,GeneID:3799602;Name=YP_401966.1;Note=Code: L%3B COG: COG1943;gbkey=CDS;gene=yafM;product=hypothetical protein;protein_id=YP_401966.1;transl_table=11
NC_007606.1	RefSeq	region	252060	252825	.	+	.	ID=id28;gbkey=mobile_element;gene=yafM
NC_007606.1	RefSeq	gene	252117	252389	.	+	.	ID=gene247;Dbxref=GeneID:18262944;Name=SDY_0254a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0254a
NC_007606.1	RefSeq	CDS	252117	252389	.	+	0	ID=cds221;Parent=gene247;Dbxref=Genbank:YP_009000628.1,GeneID:18262944;Name=YP_009000628.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000628.1;transl_table=11
NC_007606.1	RefSeq	gene	252416	252811	.	+	.	ID=gene248;Dbxref=GeneID:3799603;Name=SDY_0255;Note=SDY0255;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0255
NC_007606.1	RefSeq	CDS	252416	252811	.	+	0	ID=cds222;Parent=gene248;Dbxref=Genbank:YP_401967.1,GeneID:3799603;Name=YP_401967.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_401967.1;transl_table=11
NC_007606.1	RefSeq	gene	253042	253407	.	+	.	ID=gene249;Dbxref=GeneID:3799604;Name=sfmC;Note=SDY0256;gbkey=Gene;gene=sfmC;gene_biotype=protein_coding;locus_tag=SDY_0256
NC_007606.1	RefSeq	CDS	253042	253407	.	+	0	ID=cds223;Parent=gene249;Dbxref=Genbank:YP_401968.1,GeneID:3799604;Name=YP_401968.1;Note=Code: NU%3B COG: COG3121;gbkey=CDS;gene=sfmC;product=chaperone;protein_id=YP_401968.1;transl_table=11
NC_007606.1	RefSeq	region	253386	254153	.	+	.	ID=id29;gbkey=mobile_element;gene=sfmC
NC_007606.1	RefSeq	gene	253441	253716	.	+	.	ID=gene250;Dbxref=GeneID:3799605;Name=insA;Note=SDY0257;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0257
NC_007606.1	RefSeq	CDS	253441	253716	.	+	0	ID=cds224;Parent=gene250;Dbxref=Genbank:YP_401969.1,GeneID:3799605;Name=YP_401969.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_401969.1;transl_table=11
NC_007606.1	RefSeq	gene	253761	254138	.	+	.	ID=gene251;Dbxref=GeneID:3799606;Name=insB;Note=SDY0258;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0258
NC_007606.1	RefSeq	CDS	253761	254138	.	+	0	ID=cds225;Parent=gene251;Dbxref=Genbank:YP_401970.1,GeneID:3799606;Name=YP_401970.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_401970.1;transl_table=11
NC_007606.1	RefSeq	gene	254305	254381	.	+	.	ID=gene252;Dbxref=GeneID:3799607;Name=SDY_0259;Note=SDY0259;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0259
NC_007606.1	RefSeq	tRNA	254305	254381	.	+	.	ID=rna7;Parent=gene252;Dbxref=GeneID:3799607;codons=46;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	exon	254305	254381	.	+	.	ID=id30;Parent=rna7;Dbxref=GeneID:3799607;codons=46;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	region	254639	255405	.	-	.	ID=id31;gbkey=mobile_element
NC_007606.1	RefSeq	gene	254653	255048	.	-	.	ID=gene253;Dbxref=GeneID:3799608;Name=SDY_0260;Note=SDY0260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0260
NC_007606.1	RefSeq	CDS	254653	255048	.	-	0	ID=cds226;Parent=gene253;Dbxref=Genbank:YP_401971.1,GeneID:3799608;Name=YP_401971.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_401971.1;transl_table=11
NC_007606.1	RefSeq	gene	255075	255347	.	-	.	ID=gene254;Dbxref=GeneID:18262945;Name=SDY_0260a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0260a
NC_007606.1	RefSeq	CDS	255075	255347	.	-	0	ID=cds227;Parent=gene254;Dbxref=Genbank:YP_009000629.1,GeneID:18262945;Name=YP_009000629.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000629.1;transl_table=11
NC_007606.1	RefSeq	gene	255387	256736	.	-	.	ID=gene255;Dbxref=GeneID:3799610;Name=envY;Note=SDY0262%3B contains iso-IS1 insertion%3B original product: envelope protein%3B thermoregulation of porin biosynthesis;gbkey=Gene;gene=envY;gene_biotype=pseudogene;locus_tag=SDY_0262;pseudo=true
NC_007606.1	RefSeq	region	255645	256411	.	+	.	ID=id32;gbkey=mobile_element;gene=envY
NC_007606.1	RefSeq	gene	255702	255974	.	+	.	ID=gene256;Dbxref=GeneID:18262946;Name=SDY_0263a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0263a
NC_007606.1	RefSeq	CDS	255702	255974	.	+	0	ID=cds228;Parent=gene256;Dbxref=Genbank:YP_009000630.1,GeneID:18262946;Name=YP_009000630.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000630.1;transl_table=11
NC_007606.1	RefSeq	gene	256001	256396	.	+	.	ID=gene257;Dbxref=GeneID:3799609;Name=SDY_0261;Note=SDY0261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0261
NC_007606.1	RefSeq	CDS	256001	256396	.	+	0	ID=cds229;Parent=gene257;Dbxref=Genbank:YP_401972.1,GeneID:3799609;Name=YP_401972.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_401972.1;transl_table=11
NC_007606.1	RefSeq	gene	256919	257809	.	-	.	ID=gene258;Dbxref=GeneID:3799611;Name=SDY_0263;Note=SDY0263;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0263;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	257810	260782	.	-	.	ID=gene259;Dbxref=GeneID:3799613;Name=nfrA;Note=''SDY0265%3B contains in-frame stop codon%3B original product: bacteriophage N4 receptor%2C outer membrane protein'';gbkey=Gene;gene=nfrA;gene_biotype=pseudogene;locus_tag=SDY_0265;pseudo=true
NC_007606.1	RefSeq	gene	260895	262859	.	-	.	ID=gene260;Dbxref=GeneID:3799614;Name=nfrB;Note=SDY0266;gbkey=Gene;gene=nfrB;gene_biotype=pseudogene;locus_tag=SDY_0266;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	262846	263613	.	+	.	ID=id33;gbkey=mobile_element;gene=nfrB
NC_007606.1	RefSeq	gene	263221	263598	.	+	.	ID=gene261;Dbxref=GeneID:3799844;Name=insB;Note=SDY0267;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0267
NC_007606.1	RefSeq	CDS	263221	263598	.	+	0	ID=cds230;Parent=gene261;Dbxref=Genbank:YP_009000631.1,GeneID:3799844;Name=YP_009000631.1;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_009000631.1;transl_table=11
NC_007606.1	RefSeq	gene	263934	265604	.	+	.	ID=gene262;Dbxref=GeneID:3799845;Name=fdrA;Note=SDY0268;gbkey=Gene;gene=fdrA;gene_biotype=protein_coding;locus_tag=SDY_0268
NC_007606.1	RefSeq	CDS	263934	265604	.	+	0	ID=cds231;Parent=gene262;Dbxref=Genbank:YP_401977.1,GeneID:3799845;Name=YP_401977.1;Note=multicopy suppressor of dominant negative ftsH mutations;gbkey=CDS;gene=fdrA;product=membrane protein FdrA;protein_id=YP_401977.1;transl_table=11
NC_007606.1	RefSeq	gene	265614	266873	.	+	.	ID=gene263;Dbxref=GeneID:3799846;Name=ylbE;Note=SDY0269;gbkey=Gene;gene=ylbE;gene_biotype=protein_coding;locus_tag=SDY_0269
NC_007606.1	RefSeq	CDS	265614	266873	.	+	0	ID=cds232;Parent=gene263;Dbxref=Genbank:YP_401978.2,GeneID:3799846;Name=YP_401978.2;gbkey=CDS;gene=ylbE;product=hypothetical protein;protein_id=YP_401978.2;transl_table=11
NC_007606.1	RefSeq	gene	266884	267699	.	+	.	ID=gene264;Dbxref=GeneID:3799847;Name=ylbF;Note=SDY0270;gbkey=Gene;gene=ylbF;gene_biotype=protein_coding;locus_tag=SDY_0270
NC_007606.1	RefSeq	CDS	266884	267699	.	+	0	ID=cds233;Parent=gene264;Dbxref=Genbank:YP_401979.1,GeneID:3799847;Name=YP_401979.1;gbkey=CDS;gene=ylbF;product=carboxylase;protein_id=YP_401979.1;transl_table=11
NC_007606.1	RefSeq	gene	267696	269366	.	+	.	ID=gene265;Dbxref=GeneID:3799848;Name=arcC;Note=SDY0271%3B contains IS1 insertion%3B original product:  carbamate kinase (EC 2.7.2.2);gbkey=Gene;gene=arcC;gene_biotype=pseudogene;locus_tag=SDY_0271;pseudo=true
NC_007606.1	RefSeq	region	267953	268720	.	-	.	ID=id34;gbkey=mobile_element;gene=arcC
NC_007606.1	RefSeq	gene	267968	268345	.	-	.	ID=gene266;Dbxref=GeneID:3799849;Name=insB;Note=SDY0272;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0272
NC_007606.1	RefSeq	CDS	267968	268345	.	-	0	ID=cds234;Parent=gene266;Dbxref=Genbank:YP_401980.1,GeneID:3799849;Name=YP_401980.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_401980.1;transl_table=11
NC_007606.1	RefSeq	gene	268390	268665	.	-	.	ID=gene267;Dbxref=GeneID:3799850;Name=insA;Note=SDY0273;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0273
NC_007606.1	RefSeq	CDS	268390	268665	.	-	0	ID=cds235;Parent=gene267;Dbxref=Genbank:YP_401981.1,GeneID:3799850;Name=YP_401981.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_401981.1;transl_table=11
NC_007606.1	RefSeq	gene	269505	270572	.	-	.	ID=gene268;Dbxref=GeneID:3799851;Name=purK;Note=SDY0274;gbkey=Gene;gene=purK;gene_biotype=protein_coding;locus_tag=SDY_0274
NC_007606.1	RefSeq	CDS	269505	270572	.	-	0	ID=cds236;Parent=gene268;Dbxref=Genbank:YP_401982.1,GeneID:3799851;Name=YP_401982.1;Note=With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;gene=purK;product=phosphoribosylaminoimidazole carboxylase ATPase subunit;protein_id=YP_401982.1;transl_table=11
NC_007606.1	RefSeq	gene	270569	271078	.	-	.	ID=gene269;Dbxref=GeneID:3799852;Name=purE;Note=SDY0275;gbkey=Gene;gene=purE;gene_biotype=protein_coding;locus_tag=SDY_0275
NC_007606.1	RefSeq	CDS	270569	271078	.	-	0	ID=cds237;Parent=gene269;Dbxref=Genbank:YP_401983.1,GeneID:3799852;Name=YP_401983.1;Note=Code: F%3B COG: COG0041;gbkey=CDS;gene=purE;product=AIR carboxylase%2C catalytic subunit;protein_id=YP_401983.1;transl_table=11
NC_007606.1	RefSeq	gene	271196	271918	.	-	.	ID=gene270;Dbxref=GeneID:3799853;Name=ybbF;Note=SDY0276;gbkey=Gene;gene=ybbF;gene_biotype=protein_coding;locus_tag=SDY_0276
NC_007606.1	RefSeq	CDS	271196	271918	.	-	0	ID=cds238;Parent=gene270;Dbxref=Genbank:YP_401984.1,GeneID:3799853;Name=YP_401984.1;Note=''catalyzes the formation of 2%2C3%3Ddiacylglucosamine 1-phosphate from UDP-2%2C3%3Ddiacylglucosamine'';gbkey=CDS;gene=ybbF;product=UDP-2%2C3-diacylglucosamine hydrolase;protein_id=YP_401984.1;transl_table=11
NC_007606.1	RefSeq	gene	271921	272415	.	-	.	ID=gene271;Dbxref=GeneID:3799854;Name=ppiB;Note=SDY0277;gbkey=Gene;gene=ppiB;gene_biotype=protein_coding;locus_tag=SDY_0277
NC_007606.1	RefSeq	CDS	271921	272415	.	-	0	ID=cds239;Parent=gene271;Dbxref=Genbank:YP_401985.1,GeneID:3799854;Name=YP_401985.1;Note=Code: O%3B COG: COG0652;gbkey=CDS;gene=ppiB;product=peptidyl-prolyl cis-trans isomerase B;protein_id=YP_401985.1;transl_table=11
NC_007606.1	RefSeq	gene	272589	273974	.	+	.	ID=gene272;Dbxref=GeneID:3799855;Name=cysS;Note=SDY0278;gbkey=Gene;gene=cysS;gene_biotype=protein_coding;locus_tag=SDY_0278
NC_007606.1	RefSeq	CDS	272589	273974	.	+	0	ID=cds240;Parent=gene272;Dbxref=Genbank:YP_401986.1,GeneID:3799855;Name=YP_401986.1;Note=catalyzes a two-step reaction%3B charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=cysS;product=cysteinyl-tRNA synthetase;protein_id=YP_401986.1;transl_table=11
NC_007606.1	RefSeq	gene	274010	274531	.	-	.	ID=gene273;Dbxref=GeneID:3799856;Name=ybcI;Note=SDY0279;gbkey=Gene;gene=ybcI;gene_biotype=pseudogene;locus_tag=SDY_0279;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	274483	274872	.	-	.	ID=gene274;Dbxref=GeneID:3799857;Name=ybcJ;Note=SDY0280;gbkey=Gene;gene=ybcJ;gene_biotype=protein_coding;locus_tag=SDY_0280;pseudogene=unknown
NC_007606.1	RefSeq	CDS	274483	274872	.	-	0	ID=cds241;Parent=gene274;Dbxref=Genbank:YP_401988.1,GeneID:3799857;Name=YP_401988.1;Note=Code: S%3B COG: COG2501;gbkey=CDS;gene=ybcJ;product=hypothetical protein;protein_id=YP_401988.1;transl_table=11
NC_007606.1	RefSeq	gene	274853	275719	.	-	.	ID=gene275;Dbxref=GeneID:3799858;Name=folD;Note=SDY0281;gbkey=Gene;gene=folD;gene_biotype=protein_coding;locus_tag=SDY_0281
NC_007606.1	RefSeq	CDS	274853	275719	.	-	0	ID=cds242;Parent=gene275;Dbxref=Genbank:YP_401989.1,GeneID:3799858;Name=YP_401989.1;Note=Code: H%3B COG: COG0190;gbkey=CDS;gene=folD;product=bifunctional 5%2C10-methylene-tetrahydrofolate dehydrogenase/ 5%2C10-methylene-tetrahydrofolate cyclohydrolase;protein_id=YP_401989.1;transl_table=11
NC_007606.1	RefSeq	region	275904	276658	.	-	.	ID=id35;gbkey=mobile_element
NC_007606.1	RefSeq	gene	276328	276603	.	-	.	ID=gene276;Dbxref=GeneID:3799859;Name=insA;Note=SDY0282;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0282
NC_007606.1	RefSeq	CDS	276328	276603	.	-	0	ID=cds243;Parent=gene276;Dbxref=Genbank:YP_401990.1,GeneID:3799859;Name=YP_401990.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_401990.1;transl_table=11
NC_007606.1	RefSeq	region	276671	277934	.	-	.	ID=id36;gbkey=mobile_element
NC_007606.1	RefSeq	gene	276714	277427	.	-	.	ID=gene277;Dbxref=GeneID:3799860;Name=SDY_0283;Note=SDY0283;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0283
NC_007606.1	RefSeq	CDS	276714	277427	.	-	0	ID=cds244;Parent=gene277;Dbxref=Genbank:YP_401991.1,GeneID:3799860;Name=YP_401991.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_401991.1;transl_table=11
NC_007606.1	RefSeq	gene	277568	277870	.	-	.	ID=gene278;Dbxref=GeneID:3799861;Name=SDY_0284;Note=SDY0284;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0284
NC_007606.1	RefSeq	CDS	277568	277870	.	-	0	ID=cds245;Parent=gene278;Dbxref=Genbank:YP_401992.1,GeneID:3799861;Name=YP_401992.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_401992.1;transl_table=11
NC_007606.1	RefSeq	gene	278139	279839	.	+	.	ID=gene279;Dbxref=GeneID:3799862;Name=ybaE;Note=SDY0285;gbkey=Gene;gene=ybaE;gene_biotype=pseudogene;locus_tag=SDY_0285;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	279904	280599	.	+	.	ID=gene280;Dbxref=GeneID:3798960;Name=ybaX;Note=SDY0286;gbkey=Gene;gene=ybaX;gene_biotype=protein_coding;locus_tag=SDY_0286
NC_007606.1	RefSeq	CDS	279904	280599	.	+	0	ID=cds246;Parent=gene280;Dbxref=Genbank:YP_401994.1,GeneID:3798960;Name=YP_401994.1;Note=''YbaX%3B catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0)%2C as one of the early reactions of quenosine biosynthesis%3B quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn%2C Asp%2C Tyr%2C and His'';gbkey=CDS;gene=ybaX;product=queuosine biosynthesis protein QueC;protein_id=YP_401994.1;transl_table=11
NC_007606.1	RefSeq	gene	280651	281049	.	-	.	ID=gene281;Dbxref=GeneID:3798961;Name=ybaW;Note=SDY0287;gbkey=Gene;gene=ybaW;gene_biotype=protein_coding;locus_tag=SDY_0287
NC_007606.1	RefSeq	CDS	280651	281049	.	-	0	ID=cds247;Parent=gene281;Dbxref=Genbank:YP_401995.1,GeneID:3798961;Name=YP_401995.1;Note=Code: R%3B COG: COG0824;gbkey=CDS;gene=ybaW;product=hypothetical protein;protein_id=YP_401995.1;transl_table=11
NC_007606.1	RefSeq	region	281073	281839	.	-	.	ID=id37;gbkey=mobile_element
NC_007606.1	RefSeq	gene	281510	281782	.	-	.	ID=gene282;Dbxref=GeneID:18262947;Name=SDY_0288a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0288a
NC_007606.1	RefSeq	CDS	281510	281782	.	-	0	ID=cds248;Parent=gene282;Dbxref=Genbank:YP_009000632.1,GeneID:18262947;Name=YP_009000632.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000632.1;transl_table=11
NC_007606.1	RefSeq	gene	281930	282301	.	-	.	ID=gene283;Dbxref=GeneID:3798964;Name=ybaV;Note=SDY0290;gbkey=Gene;gene=ybaV;gene_biotype=protein_coding;locus_tag=SDY_0290
NC_007606.1	RefSeq	CDS	281930	282301	.	-	0	ID=cds249;Parent=gene283;Dbxref=Genbank:YP_401998.1,GeneID:3798964;Name=YP_401998.1;Note=Code: L%3B COG: COG1555;gbkey=CDS;gene=ybaV;product=hypothetical protein;protein_id=YP_401998.1;transl_table=11
NC_007606.1	RefSeq	gene	282452	284323	.	-	.	ID=gene284;Dbxref=GeneID:3798965;Name=ybaU;Note=SDY0291;gbkey=Gene;gene=ybaU;gene_biotype=protein_coding;locus_tag=SDY_0291
NC_007606.1	RefSeq	CDS	282452	284323	.	-	0	ID=cds250;Parent=gene284;Dbxref=Genbank:YP_401999.1,GeneID:3798965;Name=YP_401999.1;Note=Code: O%3B COG: COG0760;gbkey=CDS;gene=ybaU;product=peptidyl-prolyl cis-trans isomerase;protein_id=YP_401999.1;transl_table=11
NC_007606.1	RefSeq	gene	284515	284787	.	-	.	ID=gene285;Dbxref=GeneID:3798966;Name=hupB;Note=SDY0292;gbkey=Gene;gene=hupB;gene_biotype=protein_coding;locus_tag=SDY_0292
NC_007606.1	RefSeq	CDS	284515	284787	.	-	0	ID=cds251;Parent=gene285;Dbxref=Genbank:YP_402000.1,GeneID:3798966;Name=YP_402000.1;Note=histone-like DNA-binding protein;gbkey=CDS;gene=hupB;product=transcriptional regulator HU subunit beta;protein_id=YP_402000.1;transl_table=11
NC_007606.1	RefSeq	gene	284921	287359	.	-	.	ID=gene286;Dbxref=GeneID:3798967;Name=lon;Note=SDY0293;gbkey=Gene;gene=lon;gene_biotype=protein_coding;locus_tag=SDY_0293
NC_007606.1	RefSeq	CDS	284921	287359	.	-	0	ID=cds252;Parent=gene286;Dbxref=Genbank:YP_402001.1,GeneID:3798967;Name=YP_402001.1;Note=Code: O%3B COG: COG0466;gbkey=CDS;gene=lon;product=DNA-binding ATP-dependent protease La;protein_id=YP_402001.1;transl_table=11
NC_007606.1	RefSeq	gene	287547	288821	.	-	.	ID=gene287;Dbxref=GeneID:3798968;Name=clpX;Note=SDY0294;gbkey=Gene;gene=clpX;gene_biotype=protein_coding;locus_tag=SDY_0294
NC_007606.1	RefSeq	CDS	287547	288821	.	-	0	ID=cds253;Parent=gene287;Dbxref=Genbank:YP_402002.1,GeneID:3798968;Name=YP_402002.1;Note=binds and unfolds substrates as part of the ClpXP protease;gbkey=CDS;gene=clpX;product=ATP-dependent protease ATP-binding subunit ClpX;protein_id=YP_402002.1;transl_table=11
NC_007606.1	RefSeq	gene	288947	289570	.	-	.	ID=gene288;Dbxref=GeneID:3798969;Name=clpP;Note=SDY0295;gbkey=Gene;gene=clpP;gene_biotype=protein_coding;locus_tag=SDY_0295
NC_007606.1	RefSeq	CDS	288947	289570	.	-	0	ID=cds254;Parent=gene288;Dbxref=Genbank:YP_402003.1,GeneID:3798969;Name=YP_402003.1;Note=''hydrolyzes proteins to small peptides%3B with the ATPase subunits ClpA or ClpX%2C ClpP degrades specific substrates'';gbkey=CDS;gene=clpP;product=ATP-dependent Clp protease proteolytic subunit;protein_id=YP_402003.1;transl_table=11
NC_007606.1	RefSeq	gene	289815	291113	.	-	.	ID=gene289;Dbxref=GeneID:3798970;Name=tig;Note=SDY0296;gbkey=Gene;gene=tig;gene_biotype=protein_coding;locus_tag=SDY_0296
NC_007606.1	RefSeq	CDS	289815	291113	.	-	0	ID=cds255;Parent=gene289;Dbxref=Genbank:YP_402004.1,GeneID:3798970;Name=YP_402004.1;Note=Tig%3B RopA%3B peptidyl-prolyl cis/trans isomerase%3B promotes folding of newly synthesized proteins%3B binds ribosomal 50S subunit%3B forms a homodimer;gbkey=CDS;gene=tig;product=trigger factor;protein_id=YP_402004.1;transl_table=11
NC_007606.1	RefSeq	gene	291457	291774	.	-	.	ID=gene290;Dbxref=GeneID:3798972;Name=bolA;Note=SDY0298;gbkey=Gene;gene=bolA;gene_biotype=protein_coding;locus_tag=SDY_0298
NC_007606.1	RefSeq	CDS	291457	291774	.	-	0	ID=cds256;Parent=gene290;Dbxref=Genbank:YP_402006.2,GeneID:3798972;Name=YP_402006.2;Note=''positive transcriptional regulator of morphogenetic pathway%3B controlling several genes involved in oxidative stress%2C acid stress%2C heat shock%2C osmotic shock%2C and carbon-starvation stress'';gbkey=CDS;gene=bolA;product=transcriptional regulator BolA;protein_id=YP_402006.2;transl_table=11
NC_007606.1	RefSeq	gene	292079	292657	.	+	.	ID=gene291;Dbxref=GeneID:3798973;Name=yajG;Note=SDY0299;gbkey=Gene;gene=yajG;gene_biotype=protein_coding;locus_tag=SDY_0299
NC_007606.1	RefSeq	CDS	292079	292657	.	+	0	ID=cds257;Parent=gene291;Dbxref=Genbank:YP_402007.2,GeneID:3798973;Name=YP_402007.2;Note=Code: M%3B COG: COG3056;gbkey=CDS;gene=yajG;product=hypothetical protein;protein_id=YP_402007.2;transl_table=11
NC_007606.1	RefSeq	gene	292701	294176	.	+	.	ID=gene292;Dbxref=GeneID:3798974;Name=ampG;Note=SDY0300;gbkey=Gene;gene=ampG;gene_biotype=protein_coding;locus_tag=SDY_0300
NC_007606.1	RefSeq	CDS	292701	294176	.	+	0	ID=cds258;Parent=gene292;Dbxref=Genbank:YP_402008.1,GeneID:3798974;Name=YP_402008.1;Note=in Escherichia coli this protein is a permease involved in peptidoglycan recycling%3B member of major facilitator superfamily%3B MFS%3B inner membrane protein;gbkey=CDS;gene=ampG;product=muropeptide transporter;protein_id=YP_402008.1;transl_table=11
NC_007606.1	RefSeq	region	294259	295024	.	-	.	ID=id38;gbkey=mobile_element
NC_007606.1	RefSeq	gene	294273	294668	.	-	.	ID=gene293;Dbxref=GeneID:3798975;Name=SDY_0301;Note=SDY0301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0301
NC_007606.1	RefSeq	CDS	294273	294668	.	-	0	ID=cds259;Parent=gene293;Dbxref=Genbank:YP_402009.1,GeneID:3798975;Name=YP_402009.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402009.1;transl_table=11
NC_007606.1	RefSeq	gene	294695	294967	.	-	.	ID=gene294;Dbxref=GeneID:18262948;Name=SDY_0303a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0303a
NC_007606.1	RefSeq	CDS	294695	294967	.	-	0	ID=cds260;Parent=gene294;Dbxref=Genbank:YP_009000633.1,GeneID:18262948;Name=YP_009000633.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000633.1;transl_table=11
NC_007606.1	RefSeq	gene	295062	296432	.	+	.	ID=gene295;Dbxref=GeneID:3798977;Name=yajR;Note=SDY0303;gbkey=Gene;gene=yajR;gene_biotype=protein_coding;locus_tag=SDY_0303
NC_007606.1	RefSeq	CDS	295062	296432	.	+	0	ID=cds261;Parent=gene295;Dbxref=Genbank:YP_402011.1,GeneID:3798977;Name=YP_402011.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=yajR;product=transport protein;protein_id=YP_402011.1;transl_table=11
NC_007606.1	RefSeq	gene	296560	297051	.	-	.	ID=gene296;Dbxref=GeneID:3798978;Name=yajQ;Note=SDY0304;gbkey=Gene;gene=yajQ;gene_biotype=protein_coding;locus_tag=SDY_0304
NC_007606.1	RefSeq	CDS	296560	297051	.	-	0	ID=cds262;Parent=gene296;Dbxref=Genbank:YP_402012.2,GeneID:3798978;Name=YP_402012.2;Note=nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ%3B the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription;gbkey=CDS;gene=yajQ;product=nucleotide-binding protein;protein_id=YP_402012.2;transl_table=11
NC_007606.1	RefSeq	gene	297219	298130	.	+	.	ID=gene297;Dbxref=GeneID:3798979;Name=apbA;Note=SDY0305;gbkey=Gene;gene=apbA;gene_biotype=protein_coding;locus_tag=SDY_0305
NC_007606.1	RefSeq	CDS	297219	298130	.	+	0	ID=cds263;Parent=gene297;Dbxref=Genbank:YP_402013.1,GeneID:3798979;Name=YP_402013.1;Note=ketopantoate reductase%3B catalyzes the NADPH reduction of ketopantoate to pantoate%3B functions in pantothenate (vitamin B5) biosynthesis;gbkey=CDS;gene=apbA;product=2-dehydropantoate 2-reductase;protein_id=YP_402013.1;transl_table=11
NC_007606.1	RefSeq	gene	298087	298683	.	+	.	ID=gene298;Dbxref=GeneID:3799690;Name=thiJ;Note=SDY0306;gbkey=Gene;gene=thiJ;gene_biotype=protein_coding;locus_tag=SDY_0306
NC_007606.1	RefSeq	CDS	298087	298683	.	+	0	ID=cds264;Parent=gene298;Dbxref=Genbank:YP_402014.1,GeneID:3799690;Name=YP_402014.1;Note=Code: R%3B COG: COG0693;gbkey=CDS;gene=thiJ;product=hypothetical protein;protein_id=YP_402014.1;transl_table=11
NC_007606.1	RefSeq	gene	298737	300185	.	-	.	ID=gene299;Dbxref=GeneID:3799691;Name=yajK;Note=SDY0307;gbkey=Gene;gene=yajK;gene_biotype=protein_coding;locus_tag=SDY_0307
NC_007606.1	RefSeq	CDS	298737	300185	.	-	0	ID=cds265;Parent=gene299;Dbxref=Genbank:YP_402015.1,GeneID:3799691;Name=YP_402015.1;Note=Required for the synthesis of the thiazole moiety;gbkey=CDS;gene=yajK;product=thiamine biosynthesis protein ThiI;protein_id=YP_402015.1;transl_table=11
NC_007606.1	RefSeq	gene	300391	300633	.	+	.	ID=gene300;Dbxref=GeneID:3799692;Name=xseB;Note=SDY0308;gbkey=Gene;gene=xseB;gene_biotype=protein_coding;locus_tag=SDY_0308
NC_007606.1	RefSeq	CDS	300391	300633	.	+	0	ID=cds266;Parent=gene300;Dbxref=Genbank:YP_402016.1,GeneID:3799692;Name=YP_402016.1;Note=catalyzes the bidirectional exonucleolytic cleavage of DNA;gbkey=CDS;gene=xseB;product=exodeoxyribonuclease VII small subunit;protein_id=YP_402016.1;transl_table=11
NC_007606.1	RefSeq	gene	300633	301532	.	+	.	ID=gene301;Dbxref=GeneID:3799693;Name=ispA;Note=SDY0309;gbkey=Gene;gene=ispA;gene_biotype=protein_coding;locus_tag=SDY_0309
NC_007606.1	RefSeq	CDS	300633	301532	.	+	0	ID=cds267;Parent=gene301;Dbxref=Genbank:YP_402017.1,GeneID:3799693;Name=YP_402017.1;Note=Code: H%3B COG: COG0142;gbkey=CDS;gene=ispA;product=geranyltranstransferase;protein_id=YP_402017.1;transl_table=11
NC_007606.1	RefSeq	gene	301557	303419	.	+	.	ID=gene302;Dbxref=GeneID:3799694;Name=dxs;Note=SDY0310;gbkey=Gene;gene=dxs;gene_biotype=protein_coding;locus_tag=SDY_0310
NC_007606.1	RefSeq	CDS	301557	303419	.	+	0	ID=cds268;Parent=gene302;Dbxref=Genbank:YP_402018.1,GeneID:3799694;Name=YP_402018.1;Note=catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate;gbkey=CDS;gene=dxs;product=1-deoxy-D-xylulose-5-phosphate synthase;protein_id=YP_402018.1;transl_table=11
NC_007606.1	RefSeq	gene	303474	304448	.	+	.	ID=gene303;Dbxref=GeneID:3799695;Name=yajO;Note=SDY0311;gbkey=Gene;gene=yajO;gene_biotype=protein_coding;locus_tag=SDY_0311
NC_007606.1	RefSeq	CDS	303474	304448	.	+	0	ID=cds269;Parent=gene303;Dbxref=Genbank:YP_402019.1,GeneID:3799695;Name=YP_402019.1;Note=Code: C%3B COG: COG0667;gbkey=CDS;gene=yajO;product=NAD(P)H-dependent xylose reductase;protein_id=YP_402019.1;transl_table=11
NC_007606.1	RefSeq	region	304469	305234	.	+	.	ID=id39;gbkey=mobile_element
NC_007606.1	RefSeq	gene	304526	304798	.	+	.	ID=gene304;Dbxref=GeneID:18262949;Name=SDY_0311a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0311a
NC_007606.1	RefSeq	CDS	304526	304798	.	+	0	ID=cds270;Parent=gene304;Dbxref=Genbank:YP_009000634.1,GeneID:18262949;Name=YP_009000634.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000634.1;transl_table=11
NC_007606.1	RefSeq	gene	304825	305220	.	+	.	ID=gene305;Dbxref=GeneID:3799696;Name=SDY_0312;Note=SDY0312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0312
NC_007606.1	RefSeq	CDS	304825	305220	.	+	0	ID=cds271;Parent=gene305;Dbxref=Genbank:YP_402020.1,GeneID:3799696;Name=YP_402020.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402020.1;transl_table=11
NC_007606.1	RefSeq	gene	305221	305625	.	+	.	ID=gene306;Dbxref=GeneID:3799697;Name=SDY_0313;Note=SDY0313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0313
NC_007606.1	RefSeq	CDS	305221	305625	.	+	0	ID=cds272;Parent=gene306;Dbxref=Genbank:YP_402021.1,GeneID:3799697;Name=YP_402021.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402021.1;transl_table=11
NC_007606.1	RefSeq	region	305600	306381	.	-	.	ID=id40;gbkey=mobile_element
NC_007606.1	RefSeq	gene	305622	306017	.	-	.	ID=gene307;Dbxref=GeneID:3799698;Name=SDY_0314;Note=SDY0314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0314
NC_007606.1	RefSeq	CDS	305622	306017	.	-	0	ID=cds273;Parent=gene307;Dbxref=Genbank:YP_402022.1,GeneID:3799698;Name=YP_402022.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402022.1;transl_table=11
NC_007606.1	RefSeq	gene	306044	306316	.	-	.	ID=gene308;Dbxref=GeneID:18262950;Name=SDY_0314a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0314a
NC_007606.1	RefSeq	CDS	306044	306316	.	-	0	ID=cds274;Parent=gene308;Dbxref=Genbank:YP_009000635.1,GeneID:18262950;Name=YP_009000635.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000635.1;transl_table=11
NC_007606.1	RefSeq	gene	306388	306627	.	+	.	ID=gene309;Dbxref=GeneID:3799699;Name=SDY_0315;Note=SDY0315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0315
NC_007606.1	RefSeq	CDS	306388	306627	.	+	0	ID=cds275;Parent=gene309;Dbxref=Genbank:YP_402023.1,GeneID:3799699;Name=YP_402023.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402023.1;transl_table=11
NC_007606.1	RefSeq	gene	306805	307320	.	-	.	ID=gene310;Dbxref=GeneID:3799700;Name=pgpA;Note=SDY0316;gbkey=Gene;gene=pgpA;gene_biotype=protein_coding;locus_tag=SDY_0316
NC_007606.1	RefSeq	CDS	306805	307320	.	-	0	ID=cds276;Parent=gene310;Dbxref=Genbank:YP_402024.1,GeneID:3799700;Name=YP_402024.1;Note=hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate;gbkey=CDS;gene=pgpA;product=phosphatidylglycerophosphatase A;protein_id=YP_402024.1;transl_table=11
NC_007606.1	RefSeq	gene	307298	308275	.	-	.	ID=gene311;Dbxref=GeneID:3799701;Name=thiL;Note=SDY0317;gbkey=Gene;gene=thiL;gene_biotype=protein_coding;locus_tag=SDY_0317
NC_007606.1	RefSeq	CDS	307298	308275	.	-	0	ID=cds277;Parent=gene311;Dbxref=Genbank:YP_402025.1,GeneID:3799701;Name=YP_402025.1;Note=catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP;gbkey=CDS;gene=thiL;product=thiamine monophosphate kinase;protein_id=YP_402025.1;transl_table=11
NC_007606.1	RefSeq	gene	308353	308772	.	-	.	ID=gene312;Dbxref=GeneID:3799702;Name=nusB;Note=SDY0318;gbkey=Gene;gene=nusB;gene_biotype=protein_coding;locus_tag=SDY_0318
NC_007606.1	RefSeq	CDS	308353	308772	.	-	0	ID=cds278;Parent=gene312;Dbxref=Genbank:YP_402026.1,GeneID:3799702;Name=YP_402026.1;Note=Regulates rRNA biosynthesis by transcriptional antitermination;gbkey=CDS;gene=nusB;product=transcription antitermination protein NusB;protein_id=YP_402026.1;transl_table=11
NC_007606.1	RefSeq	gene	308792	309262	.	-	.	ID=gene313;Dbxref=GeneID:3799703;Name=ribH;Note=SDY0319;gbkey=Gene;gene=ribH;gene_biotype=protein_coding;locus_tag=SDY_0319
NC_007606.1	RefSeq	CDS	308792	309262	.	-	0	ID=cds279;Parent=gene313;Dbxref=Genbank:YP_402027.1,GeneID:3799703;Name=YP_402027.1;Note=''RibE%3B 6%2C7-diimethyl-8-ribityllumazine synthase%3B DMRL synthase%3B lumazine synthase%3B beta subunit of riboflavin synthase%3B condenses 5-amino-6-(1'-D)-ribityl-amino-2%2C4(1H%2C3H)-pyrimidinedione with L-3%2C4-dihydrohy-2-butanone-4-phosphate to generate 6%2C6-dimethyl-8-lumazine (DMRL)%3B riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12)%3B involved in the last steps of riboflavin biosynthesis%3B forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli%3B in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not'';gbkey=CDS;gene=ribH;product=6%2C7-dimethyl-8-ribityllumazine synthase;protein_id=YP_402027.1;transl_table=11
NC_007606.1	RefSeq	gene	309351	310454	.	-	.	ID=gene314;Dbxref=GeneID:3799704;Name=ribD;Note=SDY0320;gbkey=Gene;gene=ribD;gene_biotype=protein_coding;locus_tag=SDY_0320
NC_007606.1	RefSeq	CDS	309351	310454	.	-	0	ID=cds280;Parent=gene314;Dbxref=Genbank:YP_402028.1,GeneID:3799704;Name=YP_402028.1;Note=''riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway%3B catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil'';gbkey=CDS;gene=ribD;product=bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase;protein_id=YP_402028.1;transl_table=11
NC_007606.1	RefSeq	gene	310458	310907	.	-	.	ID=gene315;Dbxref=GeneID:3799705;Name=nrdR;Note=SDY0321;gbkey=Gene;gene=nrdR;gene_biotype=protein_coding;locus_tag=SDY_0321
NC_007606.1	RefSeq	CDS	310458	310907	.	-	0	ID=cds281;Parent=gene315;Dbxref=Genbank:YP_402029.1,GeneID:3799705;Name=YP_402029.1;Note=Code: K%3B COG: COG1327;gbkey=CDS;gene=nrdR;product=transcriptional regulator NrdR;protein_id=YP_402029.1;transl_table=11
NC_007606.1	RefSeq	gene	311058	311597	.	+	.	ID=gene316;Dbxref=GeneID:3799706;Name=yajI;Note=SDY0322;gbkey=Gene;gene=yajI;gene_biotype=protein_coding;locus_tag=SDY_0322
NC_007606.1	RefSeq	CDS	311058	311597	.	+	0	ID=cds282;Parent=gene316;Dbxref=Genbank:YP_402030.2,GeneID:3799706;Name=YP_402030.2;gbkey=CDS;gene=yajI;product=hypothetical protein;protein_id=YP_402030.2;transl_table=11
NC_007606.1	RefSeq	gene	311896	312780	.	+	.	ID=gene317;Dbxref=GeneID:3799707;Name=tsx;Note=SDY0323;gbkey=Gene;gene=tsx;gene_biotype=protein_coding;locus_tag=SDY_0323
NC_007606.1	RefSeq	CDS	311896	312780	.	+	0	ID=cds283;Parent=gene317;Dbxref=Genbank:YP_402031.1,GeneID:3799707;Name=YP_402031.1;Note=Code: M%3B COG: COG3248;gbkey=CDS;gene=tsx;product=nucleoside channel;protein_id=YP_402031.1;transl_table=11
NC_007606.1	RefSeq	gene	312957	313304	.	-	.	ID=gene318;Dbxref=GeneID:3799708;Name=yajD;Note=SDY0324;gbkey=Gene;gene=yajD;gene_biotype=protein_coding;locus_tag=SDY_0324
NC_007606.1	RefSeq	CDS	312957	313304	.	-	0	ID=cds284;Parent=gene318;Dbxref=Genbank:YP_402032.1,GeneID:3799708;Name=YP_402032.1;Note=Code: V%3B COG: COG1403;gbkey=CDS;gene=yajD;product=hypothetical protein;protein_id=YP_402032.1;transl_table=11
NC_007606.1	RefSeq	gene	313433	314404	.	-	.	ID=gene319;Dbxref=GeneID:3797461;Name=secF;Note=SDY0325;gbkey=Gene;gene=secF;gene_biotype=protein_coding;locus_tag=SDY_0325
NC_007606.1	RefSeq	CDS	313433	314404	.	-	0	ID=cds285;Parent=gene319;Dbxref=Genbank:YP_402033.1,GeneID:3797461;Name=YP_402033.1;Note=''forms a complex with SecD and YajC%3B SecDFyajC stimulates the proton motive force-driven protein translocation%3B seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane%3B in some organisms%2C such as Bacillus subtilis%2C SecD is fused to SecF'';gbkey=CDS;gene=secF;product=preprotein translocase subunit SecF;protein_id=YP_402033.1;transl_table=11
NC_007606.1	RefSeq	gene	314415	316262	.	-	.	ID=gene320;Dbxref=GeneID:3797462;Name=secD;Note=SDY0326;gbkey=Gene;gene=secD;gene_biotype=protein_coding;locus_tag=SDY_0326
NC_007606.1	RefSeq	CDS	314415	316262	.	-	0	ID=cds286;Parent=gene320;Dbxref=Genbank:YP_402034.1,GeneID:3797462;Name=YP_402034.1;Note=''part of the preprotein secretory system%3B when complexed with proteins SecF and YajC%2C SecDFyajC stimulates the proton motive force-driven protein translocation%2C and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane'';gbkey=CDS;gene=secD;product=preprotein translocase subunit SecD;protein_id=YP_402034.1;transl_table=11
NC_007606.1	RefSeq	gene	316290	316622	.	-	.	ID=gene321;Dbxref=GeneID:3797463;Name=yajC;Note=SDY0327;gbkey=Gene;gene=yajC;gene_biotype=protein_coding;locus_tag=SDY_0327
NC_007606.1	RefSeq	CDS	316290	316622	.	-	0	ID=cds287;Parent=gene321;Dbxref=Genbank:YP_402035.1,GeneID:3797463;Name=YP_402035.1;Note=member of preprotein translocase%3B forms a heterotrimer with SecD and SecF%3B links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex;gbkey=CDS;gene=yajC;product=preprotein translocase subunit YajC;protein_id=YP_402035.1;transl_table=11
NC_007606.1	RefSeq	gene	316645	317772	.	-	.	ID=gene322;Dbxref=GeneID:3797464;Name=tgt;Note=SDY0328;gbkey=Gene;gene=tgt;gene_biotype=protein_coding;locus_tag=SDY_0328
NC_007606.1	RefSeq	CDS	316645	317772	.	-	0	ID=cds288;Parent=gene322;Dbxref=Genbank:YP_402036.1,GeneID:3797464;Name=YP_402036.1;Note=''Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp%2C -Asn%2C -His and -Tyr)'';gbkey=CDS;gene=tgt;product=queuine tRNA-ribosyltransferase;protein_id=YP_402036.1;transl_table=11
NC_007606.1	RefSeq	gene	317827	318897	.	-	.	ID=gene323;Dbxref=GeneID:3797465;Name=queA;Note=SDY0329;gbkey=Gene;gene=queA;gene_biotype=protein_coding;locus_tag=SDY_0329
NC_007606.1	RefSeq	CDS	317827	318897	.	-	0	ID=cds289;Parent=gene323;Dbxref=Genbank:YP_402037.1,GeneID:3797465;Name=YP_402037.1;Note=Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step;gbkey=CDS;gene=queA;product=S-adenosylmethionine--tRNA ribosyltransferase-isomerase;protein_id=YP_402037.1;transl_table=11
NC_007606.1	RefSeq	gene	318991	319588	.	+	.	ID=gene324;Dbxref=GeneID:3797466;Name=yajB;Note=SDY0330;gbkey=Gene;gene=yajB;gene_biotype=pseudogene;locus_tag=SDY_0330;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	319988	320755	.	+	.	ID=id41;gbkey=mobile_element
NC_007606.1	RefSeq	gene	320045	320317	.	+	.	ID=gene325;Dbxref=GeneID:18262951;Name=SDY_0332a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0332a
NC_007606.1	RefSeq	CDS	320045	320317	.	+	0	ID=cds290;Parent=gene325;Dbxref=Genbank:YP_009000636.1,GeneID:18262951;Name=YP_009000636.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000636.1;transl_table=11
NC_007606.1	RefSeq	gene	320526	320741	.	+	.	ID=gene326;Dbxref=GeneID:3797469;Name=SDY_0333;Note=SDY0333;gbkey=Gene;gene_biotype=other;locus_tag=SDY_0333
NC_007606.1	RefSeq	gene	320751	321875	.	-	.	ID=gene327;Dbxref=GeneID:3797470;Name=malZ;Note=SDY0334%3B truncated%3B original product: maltodextrin glucosidase;gbkey=Gene;gene=malZ;gene_biotype=pseudogene;locus_tag=SDY_0334;pseudo=true
NC_007606.1	RefSeq	gene	322222	323595	.	-	.	ID=gene328;Dbxref=GeneID:3797471;Name=proY;Note=SDY0335;gbkey=Gene;gene=proY;gene_biotype=protein_coding;locus_tag=SDY_0335
NC_007606.1	RefSeq	CDS	322222	323595	.	-	0	ID=cds291;Parent=gene328;Dbxref=Genbank:YP_402042.1,GeneID:3797471;Name=YP_402042.1;Note=''cryptic permease that may be involved in the transport of proline across the inner membrane%3B in Salmonella typhimurium%2C the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation'';gbkey=CDS;gene=proY;product=proline-specific permease;protein_id=YP_402042.1;transl_table=11
NC_007606.1	RefSeq	gene	323671	324990	.	-	.	ID=gene329;Dbxref=GeneID:3797472;Name=brnQ;Note=SDY0336;gbkey=Gene;gene=brnQ;gene_biotype=protein_coding;locus_tag=SDY_0336
NC_007606.1	RefSeq	CDS	323671	324990	.	-	0	ID=cds292;Parent=gene329;Dbxref=Genbank:YP_402043.1,GeneID:3797472;Name=YP_402043.1;Note=Code: E%3B COG: COG1114;gbkey=CDS;gene=brnQ;product=branched chain amino acid transport system II carrier protein;protein_id=YP_402043.1;transl_table=11
NC_007606.1	RefSeq	gene	325397	326693	.	-	.	ID=gene330;Dbxref=GeneID:3797473;Name=phoR;Note=SDY0337%3B frameshift%3B original product: positive and negative sensor protein for pho regulon;gbkey=Gene;gene=phoR;gene_biotype=pseudogene;locus_tag=SDY_0337;pseudo=true
NC_007606.1	RefSeq	gene	326751	327440	.	-	.	ID=gene331;Dbxref=GeneID:3797474;Name=phoB;Note=SDY0338;gbkey=Gene;gene=phoB;gene_biotype=protein_coding;locus_tag=SDY_0338
NC_007606.1	RefSeq	CDS	326751	327440	.	-	0	ID=cds293;Parent=gene331;Dbxref=Genbank:YP_402044.1,GeneID:3797474;Name=YP_402044.1;Note=two component response regulator for the phosphate regulon%3B PhoR phosphorylates PhoB;gbkey=CDS;gene=phoB;product=transcriptional regulator PhoB;protein_id=YP_402044.1;transl_table=11
NC_007606.1	RefSeq	gene	327630	330270	.	+	.	ID=gene332;Dbxref=GeneID:3797475;Name=sbcD;Note=SDY0339%3B contains IS4 insertion%3B original product: ATP-dependent dsDNA exonuclease;gbkey=Gene;gene=sbcD;gene_biotype=pseudogene;locus_tag=SDY_0339;pseudo=true
NC_007606.1	RefSeq	region	328403	329829	.	-	.	ID=id42;gbkey=mobile_element;gene=sbcD
NC_007606.1	RefSeq	gene	328417	329763	.	-	.	ID=gene333;Dbxref=GeneID:3797476;Name=SDY_0340;Note=SDY0340;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0340
NC_007606.1	RefSeq	CDS	328417	329763	.	-	0	ID=cds294;Parent=gene333;Dbxref=Genbank:YP_402045.1,GeneID:3797476;Name=YP_402045.1;Note=Code: L%3B COG: COG3385;gbkey=CDS;product=insertion sequence element IS4 transposase InsG;protein_id=YP_402045.1;transl_table=11
NC_007606.1	RefSeq	gene	330267	333404	.	+	.	ID=gene334;Dbxref=GeneID:3797477;Name=sbcC;Note=SDY0341;gbkey=Gene;gene=sbcC;gene_biotype=protein_coding;locus_tag=SDY_0341
NC_007606.1	RefSeq	CDS	330267	333404	.	+	0	ID=cds295;Parent=gene334;Dbxref=Genbank:YP_402046.1,GeneID:3797477;Name=YP_402046.1;Note=with SbcD cleaves DNA hairpin structures%3B also has 5' single-strand endonuclease activity;gbkey=CDS;gene=sbcC;product=exonuclease SbcC;protein_id=YP_402046.1;transl_table=11
NC_007606.1	RefSeq	gene	333446	335572	.	+	.	ID=gene335;Dbxref=GeneID:3797478;Name=araJ;Note=SDY0342%3B contains iso-IS1 insertion%3B original product: involved in either transport or processing of arabinose polymers;gbkey=Gene;gene=araJ;gene_biotype=pseudogene;locus_tag=SDY_0342;pseudo=true
NC_007606.1	RefSeq	region	334255	335020	.	+	.	ID=id43;Dbxref=GeneID:3797478;gbkey=mobile_element;gene=araJ
NC_007606.1	RefSeq	gene	334611	335006	.	+	.	ID=gene336;Dbxref=GeneID:3797479;Name=SDY_0343;Note=SDY0343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0343
NC_007606.1	RefSeq	CDS	334611	335006	.	+	0	ID=cds296;Parent=gene336;Dbxref=Genbank:YP_402047.2,GeneID:3797479;Name=YP_402047.2;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402047.2;transl_table=11
NC_007606.1	RefSeq	gene	335631	336539	.	-	.	ID=gene337;Dbxref=GeneID:3796843;Name=yajF;Note=SDY0345;gbkey=Gene;gene=yajF;gene_biotype=protein_coding;locus_tag=SDY_0345
NC_007606.1	RefSeq	CDS	335631	336539	.	-	0	ID=cds297;Parent=gene337;Dbxref=Genbank:YP_402048.2,GeneID:3796843;Name=YP_402048.2;Note=catalyzes phosphorylation of fructose%3B cytosolic enzyme;gbkey=CDS;gene=yajF;product=fructokinase;protein_id=YP_402048.2;transl_table=11
NC_007606.1	RefSeq	gene	336664	337575	.	+	.	ID=gene338;Dbxref=GeneID:3797480;Name=rdgC;Note=SDY0344;gbkey=Gene;gene=rdgC;gene_biotype=protein_coding;locus_tag=SDY_0344
NC_007606.1	RefSeq	CDS	336664	337575	.	+	0	ID=cds298;Parent=gene338;Dbxref=Genbank:YP_402049.1,GeneID:3797480;Name=YP_402049.1;Note=Required for efficient pilin antigenic variation;gbkey=CDS;gene=rdgC;product=recombination associated protein;protein_id=YP_402049.1;transl_table=11
NC_007606.1	RefSeq	gene	337653	338108	.	-	.	ID=gene339;Dbxref=GeneID:3796844;Name=SDY_0346;Note=SDY0346;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0346
NC_007606.1	RefSeq	CDS	337653	338108	.	-	0	ID=cds299;Parent=gene339;Dbxref=Genbank:YP_402050.1,GeneID:3796844;Name=YP_402050.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402050.1;transl_table=11
NC_007606.1	RefSeq	region	338235	339000	.	-	.	ID=id44;gbkey=mobile_element
NC_007606.1	RefSeq	gene	338249	338644	.	-	.	ID=gene340;Dbxref=GeneID:3796845;Name=SDY_0347;Note=SDY0347;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0347
NC_007606.1	RefSeq	CDS	338249	338644	.	-	0	ID=cds300;Parent=gene340;Dbxref=Genbank:YP_402051.1,GeneID:3796845;Name=YP_402051.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402051.1;transl_table=11
NC_007606.1	RefSeq	gene	338671	338943	.	-	.	ID=gene341;Dbxref=GeneID:18262952;Name=SDY_0347a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0347a
NC_007606.1	RefSeq	CDS	338671	338943	.	-	0	ID=cds301;Parent=gene341;Dbxref=Genbank:YP_009000637.1,GeneID:18262952;Name=YP_009000637.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000637.1;transl_table=11
NC_007606.1	RefSeq	region	339977	341307	.	+	.	ID=id45;gbkey=mobile_element
NC_007606.1	RefSeq	gene	340068	340433	.	+	.	ID=gene342;Dbxref=GeneID:3796847;Name=SDY_0349;Note=SDY0349;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0349
NC_007606.1	RefSeq	CDS	340068	340433	.	+	0	ID=cds302;Parent=gene342;Dbxref=Genbank:YP_402053.1,GeneID:3796847;Name=YP_402053.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_402053.1;transl_table=11
NC_007606.1	RefSeq	gene	340391	341296	.	+	.	ID=gene343;Dbxref=GeneID:3796848;Name=SDY_0350;Note=SDY0350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0350
NC_007606.1	RefSeq	CDS	340391	341296	.	+	0	ID=cds303;Parent=gene343;Dbxref=Genbank:YP_402054.2,GeneID:3796848;Name=YP_402054.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_402054.2;transl_table=11
NC_007606.1	RefSeq	region	341490	342258	.	+	.	ID=id46;gbkey=mobile_element
NC_007606.1	RefSeq	gene	341547	341819	.	+	.	ID=gene344;Dbxref=GeneID:18262953;Name=SDY_0350a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0350a
NC_007606.1	RefSeq	CDS	341547	341819	.	+	0	ID=cds304;Parent=gene344;Dbxref=Genbank:YP_009000638.1,GeneID:18262953;Name=YP_009000638.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000638.1;transl_table=11
NC_007606.1	RefSeq	gene	342028	342243	.	+	.	ID=gene345;Dbxref=GeneID:3796849;Name=SDY_0351;Note=SDY0351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0351
NC_007606.1	RefSeq	CDS	342028	342243	.	+	0	ID=cds305;Parent=gene345;Dbxref=Genbank:YP_402055.1,GeneID:3796849;Name=YP_402055.1;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402055.1;transl_table=11
NC_007606.1	RefSeq	gene	342329	342613	.	-	.	ID=gene346;Dbxref=GeneID:3796850;Name=yaiE;Note=SDY0352;gbkey=Gene;gene=yaiE;gene_biotype=protein_coding;locus_tag=SDY_0352
NC_007606.1	RefSeq	CDS	342329	342613	.	-	0	ID=cds306;Parent=gene346;Dbxref=Genbank:YP_402056.1,GeneID:3796850;Name=YP_402056.1;Note=Code: S%3B COG: COG3123;gbkey=CDS;gene=yaiE;product=hypothetical protein;protein_id=YP_402056.1;transl_table=11
NC_007606.1	RefSeq	gene	342685	343362	.	-	.	ID=gene347;Dbxref=GeneID:3796851;Name=aroM;Note=SDY0353;gbkey=Gene;gene=aroM;gene_biotype=protein_coding;locus_tag=SDY_0353
NC_007606.1	RefSeq	CDS	342685	343362	.	-	0	ID=cds307;Parent=gene347;Dbxref=Genbank:YP_402057.1,GeneID:3796851;Name=YP_402057.1;gbkey=CDS;gene=aroM;product=hypothetical protein;protein_id=YP_402057.1;transl_table=11
NC_007606.1	RefSeq	gene	343620	343811	.	-	.	ID=gene348;Dbxref=GeneID:3796852;Name=yaiA;Note=SDY0354;gbkey=Gene;gene=yaiA;gene_biotype=protein_coding;locus_tag=SDY_0354
NC_007606.1	RefSeq	CDS	343620	343811	.	-	0	ID=cds308;Parent=gene348;Dbxref=Genbank:YP_402058.1,GeneID:3796852;Name=YP_402058.1;gbkey=CDS;gene=yaiA;product=hypothetical protein;protein_id=YP_402058.1;transl_table=11
NC_007606.1	RefSeq	gene	343861	344385	.	-	.	ID=gene349;Dbxref=GeneID:3796853;Name=aroL;Note=SDY0355;gbkey=Gene;gene=aroL;gene_biotype=protein_coding;locus_tag=SDY_0355
NC_007606.1	RefSeq	CDS	343861	344385	.	-	0	ID=cds309;Parent=gene349;Dbxref=Genbank:YP_402059.1,GeneID:3796853;Name=YP_402059.1;Note=type II enzyme similar to type I but differentially regulated and with a lower Km%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroL;product=shikimate kinase;protein_id=YP_402059.1;transl_table=11
NC_007606.1	RefSeq	gene	344568	345026	.	-	.	ID=gene350;Dbxref=GeneID:3796855;Name=yaiI;Note=SDY0357;gbkey=Gene;gene=yaiI;gene_biotype=protein_coding;locus_tag=SDY_0357
NC_007606.1	RefSeq	CDS	344568	345026	.	-	0	ID=cds310;Parent=gene350;Dbxref=Genbank:YP_402060.2,GeneID:3796855;Name=YP_402060.2;Note=Code: S%3B COG: COG1671;gbkey=CDS;gene=yaiI;product=hypothetical protein;protein_id=YP_402060.2;transl_table=11
NC_007606.1	RefSeq	gene	345146	345955	.	+	.	ID=gene351;Dbxref=GeneID:3796854;Name=proC;Note=SDY0356;gbkey=Gene;gene=proC;gene_biotype=protein_coding;locus_tag=SDY_0356
NC_007606.1	RefSeq	CDS	345146	345955	.	+	0	ID=cds311;Parent=gene351;Dbxref=Genbank:YP_402061.1,GeneID:3796854;Name=YP_402061.1;Note=catalyzes the formation of L-proline from pyrroline-5-carboxylate;gbkey=CDS;gene=proC;product=pyrroline-5-carboxylate reductase;protein_id=YP_402061.1;transl_table=11
NC_007606.1	RefSeq	gene	345972	347087	.	-	.	ID=gene352;Dbxref=GeneID:3796856;Name=adrA;Note=SDY0358;gbkey=Gene;gene=adrA;gene_biotype=protein_coding;locus_tag=SDY_0358
NC_007606.1	RefSeq	CDS	345972	347087	.	-	0	ID=cds312;Parent=gene352;Dbxref=Genbank:YP_402062.1,GeneID:3796856;Name=YP_402062.1;Note=''catalyzes the conversion of 2 GTP into c-di-GMP%3B adrA overexpression induces cellulose biosynthesis%2C cell adherence to abiotic surfaces and swimming and swarming motility%3B AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis'';gbkey=CDS;gene=adrA;product=diguanylate cyclase AdrA;protein_id=YP_402062.1;transl_table=11
NC_007606.1	RefSeq	region	347226	348489	.	-	.	ID=id47;gbkey=mobile_element
NC_007606.1	RefSeq	gene	347269	347982	.	-	.	ID=gene353;Dbxref=GeneID:3796857;Name=SDY_0359;Note=SDY0359;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0359
NC_007606.1	RefSeq	CDS	347269	347982	.	-	0	ID=cds313;Parent=gene353;Dbxref=Genbank:YP_402063.1,GeneID:3796857;Name=YP_402063.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402063.1;transl_table=11
NC_007606.1	RefSeq	gene	348519	348794	.	-	.	ID=gene354;Dbxref=GeneID:3796858;Name=psiF;Note=SDY0360;gbkey=Gene;gene=psiF;gene_biotype=protein_coding;locus_tag=SDY_0360
NC_007606.1	RefSeq	CDS	348519	348794	.	-	0	ID=cds314;Parent=gene354;Dbxref=Genbank:YP_402064.1,GeneID:3796858;Name=YP_402064.1;gbkey=CDS;gene=psiF;product=induced by phosphate starvation;protein_id=YP_402064.1;transl_table=11
NC_007606.1	RefSeq	gene	348895	350309	.	-	.	ID=gene355;Dbxref=GeneID:3796859;Name=phoA;Note=SDY0361%3B frameshift%3B original product: alkaline phosphatase;gbkey=Gene;gene=phoA;gene_biotype=pseudogene;locus_tag=SDY_0361;pseudo=true
NC_007606.1	RefSeq	region	350314	351085	.	+	.	ID=id48;gbkey=mobile_element
NC_007606.1	RefSeq	gene	350377	350649	.	+	.	ID=gene356;Dbxref=GeneID:18262954;Name=SDY_0360a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0360a
NC_007606.1	RefSeq	CDS	350377	350649	.	+	0	ID=cds315;Parent=gene356;Dbxref=Genbank:YP_009000639.1,GeneID:18262954;Name=YP_009000639.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000639.1;transl_table=11
NC_007606.1	RefSeq	gene	350676	351071	.	+	.	ID=gene357;Dbxref=GeneID:3796860;Name=SDY_0362;Note=SDY0362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0362
NC_007606.1	RefSeq	CDS	350676	351071	.	+	0	ID=cds316;Parent=gene357;Dbxref=Genbank:YP_402065.1,GeneID:3796860;Name=YP_402065.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402065.1;transl_table=11
NC_007606.1	RefSeq	gene	351184	351444	.	-	.	ID=gene358;Dbxref=GeneID:3796861;Name=yaiB;Note=SDY0363;gbkey=Gene;gene=yaiB;gene_biotype=protein_coding;locus_tag=SDY_0363
NC_007606.1	RefSeq	CDS	351184	351444	.	-	0	ID=cds317;Parent=gene358;Dbxref=Genbank:YP_402066.1,GeneID:3796861;Name=YP_402066.1;gbkey=CDS;gene=yaiB;product=hypothetical protein;protein_id=YP_402066.1;transl_table=11
NC_007606.1	RefSeq	region	351479	352247	.	-	.	ID=id49;gbkey=mobile_element
NC_007606.1	RefSeq	gene	351496	351891	.	-	.	ID=gene359;Dbxref=GeneID:3799557;Name=SDY_0364;Note=SDY0364;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0364
NC_007606.1	RefSeq	CDS	351496	351891	.	-	0	ID=cds318;Parent=gene359;Dbxref=Genbank:YP_402067.1,GeneID:3799557;Name=YP_402067.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402067.1;transl_table=11
NC_007606.1	RefSeq	gene	351918	352190	.	-	.	ID=gene360;Dbxref=GeneID:18262955;Name=SDY_0365a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0365a
NC_007606.1	RefSeq	CDS	351918	352190	.	-	0	ID=cds319;Parent=gene360;Dbxref=Genbank:YP_009000640.1,GeneID:18262955;Name=YP_009000640.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000640.1;transl_table=11
NC_007606.1	RefSeq	gene	352680	353774	.	+	.	ID=gene361;Dbxref=GeneID:3799558;Name=ddl;Note=SDY0365;gbkey=Gene;gene=ddl;gene_biotype=protein_coding;locus_tag=SDY_0365
NC_007606.1	RefSeq	CDS	352680	353774	.	+	0	ID=cds320;Parent=gene361;Dbxref=Genbank:YP_402068.1,GeneID:3799558;Name=YP_402068.1;Note=D-alanine--D-alanine ligase%3B DdlA%3B DdlB%3B cytoplasmic%3B catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis%3B there are two forms of this enzyme in Escherichia coli;gbkey=CDS;gene=ddl;product=D-alanyl-alanine synthetase A;protein_id=YP_402068.1;transl_table=11
NC_007606.1	RefSeq	gene	353798	354142	.	-	.	ID=gene362;Dbxref=GeneID:3799559;Name=SDY_0366;Note=SDY0366;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0366
NC_007606.1	RefSeq	CDS	353798	354142	.	-	0	ID=cds321;Parent=gene362;Dbxref=Genbank:YP_402069.1,GeneID:3799559;Name=YP_402069.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402069.1;transl_table=11
NC_007606.1	RefSeq	gene	354270	354578	.	+	.	ID=gene363;Dbxref=GeneID:3799560;Name=SDY_0367;Note=SDY0367;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0367
NC_007606.1	RefSeq	CDS	354270	354578	.	+	0	ID=cds322;Parent=gene363;Dbxref=Genbank:YP_402070.1,GeneID:3799560;Name=YP_402070.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402070.1;transl_table=11
NC_007606.1	RefSeq	gene	354637	355731	.	-	.	ID=gene364;Dbxref=GeneID:3799561;Name=yaiW;Note=SDY0368;gbkey=Gene;gene=yaiW;gene_biotype=protein_coding;locus_tag=SDY_0368
NC_007606.1	RefSeq	CDS	354637	355731	.	-	0	ID=cds323;Parent=gene364;Dbxref=Genbank:YP_402071.1,GeneID:3799561;Name=YP_402071.1;gbkey=CDS;gene=yaiW;product=hypothetical protein;protein_id=YP_402071.1;transl_table=11
NC_007606.1	RefSeq	gene	355744	356964	.	-	.	ID=gene365;Dbxref=GeneID:3799562;Name=sbmA;Note=SDY0369;gbkey=Gene;gene=sbmA;gene_biotype=protein_coding;locus_tag=SDY_0369
NC_007606.1	RefSeq	CDS	355744	356964	.	-	0	ID=cds324;Parent=gene365;Dbxref=Genbank:YP_402072.1,GeneID:3799562;Name=YP_402072.1;Note=''in Escherichia coli SbmA is involved in uptake of microcin J25%3B functions along with FhuA%2C TonB%2C and ExbB/D in this capacity%3B in Sinorhizobium meliloti%2C BacA is essential and required for symbiosis%3B defects appear to affect the cell envelope'';gbkey=CDS;gene=sbmA;product=transporter;protein_id=YP_402072.1;transl_table=11
NC_007606.1	RefSeq	gene	357316	358485	.	+	.	ID=gene366;Dbxref=GeneID:3799563;Name=yaiH;Note=SDY0370;gbkey=Gene;gene=yaiH;gene_biotype=protein_coding;locus_tag=SDY_0370
NC_007606.1	RefSeq	CDS	357316	358485	.	+	0	ID=cds325;Parent=gene366;Dbxref=Genbank:YP_402073.1,GeneID:3799563;Name=YP_402073.1;Note=this protein has no known enzymatic function;gbkey=CDS;gene=yaiH;product=beta-lactam binding protein AmpH;protein_id=YP_402073.1;transl_table=11
NC_007606.1	RefSeq	gene	358474	358707	.	-	.	ID=gene367;Dbxref=GeneID:3799564;Name=SDY_0371;Note=SDY0371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0371
NC_007606.1	RefSeq	CDS	358474	358707	.	-	0	ID=cds326;Parent=gene367;Dbxref=Genbank:YP_402074.1,GeneID:3799564;Name=YP_402074.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402074.1;transl_table=11
NC_007606.1	RefSeq	region	358813	359581	.	+	.	ID=id50;gbkey=mobile_element
NC_007606.1	RefSeq	gene	358871	359143	.	+	.	ID=gene368;Dbxref=GeneID:18262956;Name=SDY_0371a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0371a
NC_007606.1	RefSeq	CDS	358871	359143	.	+	0	ID=cds327;Parent=gene368;Dbxref=Genbank:YP_009000641.1,GeneID:18262956;Name=YP_009000641.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000641.1;transl_table=11
NC_007606.1	RefSeq	gene	359170	359565	.	+	.	ID=gene369;Dbxref=GeneID:3799565;Name=SDY_0372;Note=SDY0372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0372
NC_007606.1	RefSeq	CDS	359170	359565	.	+	0	ID=cds328;Parent=gene369;Dbxref=Genbank:YP_402075.1,GeneID:3799565;Name=YP_402075.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402075.1;transl_table=11
NC_007606.1	RefSeq	gene	359575	359916	.	-	.	ID=gene370;Dbxref=GeneID:3799566;Name=yaiV;Note=SDY0373;gbkey=Gene;gene=yaiV;gene_biotype=protein_coding;locus_tag=SDY_0373
NC_007606.1	RefSeq	CDS	359575	359916	.	-	0	ID=cds329;Parent=gene370;Dbxref=Genbank:YP_402076.1,GeneID:3799566;Name=YP_402076.1;gbkey=CDS;gene=yaiV;product=hypothetical protein;protein_id=YP_402076.1;transl_table=11
NC_007606.1	RefSeq	region	359990	360757	.	-	.	ID=id51;gbkey=mobile_element
NC_007606.1	RefSeq	gene	360005	360382	.	-	.	ID=gene371;Dbxref=GeneID:3799567;Name=insB;Note=SDY0374;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0374
NC_007606.1	RefSeq	CDS	360005	360382	.	-	0	ID=cds330;Parent=gene371;Dbxref=Genbank:YP_402077.1,GeneID:3799567;Name=YP_402077.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402077.1;transl_table=11
NC_007606.1	RefSeq	gene	360427	360702	.	-	.	ID=gene372;Dbxref=GeneID:3799568;Name=insA;Note=SDY0375;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0375
NC_007606.1	RefSeq	CDS	360427	360702	.	-	0	ID=cds331;Parent=gene372;Dbxref=Genbank:YP_402078.1,GeneID:3799568;Name=YP_402078.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402078.1;transl_table=11
NC_007606.1	RefSeq	gene	360736	360999	.	-	.	ID=gene373;Dbxref=GeneID:3799569;Name=lacY;Note=SDY0376%3B truncated%3B original product: galactoside permease (M protein);gbkey=Gene;gene=lacY;gene_biotype=pseudogene;locus_tag=SDY_0376;pseudo=true
NC_007606.1	RefSeq	region	361124	361889	.	+	.	ID=id52;gbkey=mobile_element
NC_007606.1	RefSeq	gene	361181	361453	.	+	.	ID=gene374;Dbxref=GeneID:18262957;Name=SDY_0375a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0375a
NC_007606.1	RefSeq	CDS	361181	361453	.	+	0	ID=cds332;Parent=gene374;Dbxref=Genbank:YP_009000642.1,GeneID:18262957;Name=YP_009000642.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000642.1;transl_table=11
NC_007606.1	RefSeq	gene	361480	361875	.	+	.	ID=gene375;Dbxref=GeneID:3799570;Name=SDY_0377;Note=SDY0377;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0377
NC_007606.1	RefSeq	CDS	361480	361875	.	+	0	ID=cds333;Parent=gene375;Dbxref=Genbank:YP_402079.2,GeneID:3799570;Name=YP_402079.2;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402079.2;transl_table=11
NC_007606.1	RefSeq	gene	362065	365140	.	-	.	ID=gene376;Dbxref=GeneID:3799571;Name=lacZ;Note=SDY0378;gbkey=Gene;gene=lacZ;gene_biotype=pseudogene;locus_tag=SDY_0378;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	365263	366345	.	-	.	ID=gene377;Dbxref=GeneID:3799572;Name=lacI;Note=SDY0379;gbkey=Gene;gene=lacI;gene_biotype=protein_coding;locus_tag=SDY_0379
NC_007606.1	RefSeq	CDS	365263	366345	.	-	0	ID=cds334;Parent=gene377;Dbxref=Genbank:YP_402081.1,GeneID:3799572;Name=YP_402081.1;Note=transcriptional repressor of lac operon%3B forms a homotetramer as a dimer of dimers%3B binds specific sites in lac operon resulting in DNA looping between the operators%3B binds allolactose as inducer;gbkey=CDS;gene=lacI;product=lac repressor;protein_id=YP_402081.1;transl_table=11
NC_007606.1	RefSeq	gene	366382	366864	.	-	.	ID=gene378;Dbxref=GeneID:3799573;Name=SDY_0380;Note=SDY0380;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0380
NC_007606.1	RefSeq	CDS	366382	366864	.	-	0	ID=cds335;Parent=gene378;Dbxref=Genbank:YP_402082.1,GeneID:3799573;Name=YP_402082.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402082.1;transl_table=11
NC_007606.1	RefSeq	region	366816	368079	.	+	.	ID=id53;gbkey=mobile_element
NC_007606.1	RefSeq	gene	366880	367182	.	+	.	ID=gene379;Dbxref=GeneID:3799574;Name=SDY_0381;Note=SDY0381;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0381
NC_007606.1	RefSeq	CDS	366880	367182	.	+	0	ID=cds336;Parent=gene379;Dbxref=Genbank:YP_402083.1,GeneID:3799574;Name=YP_402083.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402083.1;transl_table=11
NC_007606.1	RefSeq	gene	367323	368036	.	+	.	ID=gene380;Dbxref=GeneID:3799575;Name=SDY_0382;Note=SDY0382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0382
NC_007606.1	RefSeq	CDS	367323	368036	.	+	0	ID=cds337;Parent=gene380;Dbxref=Genbank:YP_402084.1,GeneID:3799575;Name=YP_402084.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402084.1;transl_table=11
NC_007606.1	RefSeq	gene	368064	368510	.	+	.	ID=gene381;Dbxref=GeneID:3799576;Name=cof;Note=SDY0383;gbkey=Gene;gene=cof;gene_biotype=protein_coding;locus_tag=SDY_0383
NC_007606.1	RefSeq	CDS	368064	368510	.	+	0	ID=cds338;Parent=gene381;Dbxref=Genbank:YP_402085.1,GeneID:3799576;Name=YP_402085.1;Note=Code: R%3B COG: COG0561;gbkey=CDS;gene=cof;product=hypothetical protein;protein_id=YP_402085.1;transl_table=11
NC_007606.1	RefSeq	gene	368576	369121	.	+	.	ID=gene382;Dbxref=GeneID:3799577;Name=ybaO;Note=SDY0384;gbkey=Gene;gene=ybaO;gene_biotype=protein_coding;locus_tag=SDY_0384
NC_007606.1	RefSeq	CDS	368576	369121	.	+	0	ID=cds339;Parent=gene382;Dbxref=Genbank:YP_402086.1,GeneID:3799577;Name=YP_402086.1;Note=Code: K%3B COG: COG1522;gbkey=CDS;gene=ybaO;product=LRP-like transcriptional regulator;protein_id=YP_402086.1;transl_table=11
NC_007606.1	RefSeq	gene	369151	370923	.	+	.	ID=gene383;Dbxref=GeneID:3799578;Name=mdlA;Note=SDY0385;gbkey=Gene;gene=mdlA;gene_biotype=protein_coding;locus_tag=SDY_0385
NC_007606.1	RefSeq	CDS	369151	370923	.	+	0	ID=cds340;Parent=gene383;Dbxref=Genbank:YP_402087.1,GeneID:3799578;Name=YP_402087.1;Note=Code: V%3B COG: COG1132;gbkey=CDS;gene=mdlA;product=multidrug transporter membrane protein/ATP-binding protein;protein_id=YP_402087.1;transl_table=11
NC_007606.1	RefSeq	gene	370916	372697	.	+	.	ID=gene384;Dbxref=GeneID:3799579;Name=mdlB;Note=SDY0386;gbkey=Gene;gene=mdlB;gene_biotype=protein_coding;locus_tag=SDY_0386
NC_007606.1	RefSeq	CDS	370916	372697	.	+	0	ID=cds341;Parent=gene384;Dbxref=Genbank:YP_402088.1,GeneID:3799579;Name=YP_402088.1;Note=Code: V%3B COG: COG1132;gbkey=CDS;gene=mdlB;product=multidrug transporter membrane protein/ATP-binding protein;protein_id=YP_402088.1;transl_table=11
NC_007606.1	RefSeq	gene	372878	373216	.	+	.	ID=gene385;Dbxref=GeneID:3799580;Name=glnK;Note=SDY0387;gbkey=Gene;gene=glnK;gene_biotype=protein_coding;locus_tag=SDY_0387
NC_007606.1	RefSeq	CDS	372878	373216	.	+	0	ID=cds342;Parent=gene385;Dbxref=Genbank:YP_402089.1,GeneID:3799580;Name=YP_402089.1;Note=''indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA%3B functionally it is equivalent to protein P-II (GlnB)%2C but itsexpression is driven by the presence of uridylyltransferase%2C nitrogen regulator I%2C and the absence of ammonia.'';gbkey=CDS;gene=glnK;product=nitrogen regulatory protein P-II 2;protein_id=YP_402089.1;transl_table=11
NC_007606.1	RefSeq	gene	373246	374532	.	+	.	ID=gene386;Dbxref=GeneID:3799581;Name=amtB;Note=SDY0388;gbkey=Gene;gene=amtB;gene_biotype=protein_coding;locus_tag=SDY_0388
NC_007606.1	RefSeq	CDS	373246	374532	.	+	0	ID=cds343;Parent=gene386;Dbxref=Genbank:YP_402090.1,GeneID:3799581;Name=YP_402090.1;Note=Code: P%3B COG: COG0004;gbkey=CDS;gene=amtB;product=ammonium transporter;protein_id=YP_402090.1;transl_table=11
NC_007606.1	RefSeq	gene	374581	375441	.	-	.	ID=gene387;Dbxref=GeneID:3799582;Name=tesB;Note=SDY0389;gbkey=Gene;gene=tesB;gene_biotype=protein_coding;locus_tag=SDY_0389
NC_007606.1	RefSeq	CDS	374581	375441	.	-	0	ID=cds344;Parent=gene387;Dbxref=Genbank:YP_402091.1,GeneID:3799582;Name=YP_402091.1;Note=Code: I%3B COG: COG1946;gbkey=CDS;gene=tesB;product=acyl-CoA thioesterase;protein_id=YP_402091.1;transl_table=11
NC_007606.1	RefSeq	gene	375659	376231	.	+	.	ID=gene388;Dbxref=GeneID:3799583;Name=ybaY;Note=SDY0390%3B contains in-frame stop codon%3B original product: glycoprotein/polysaccharide metabolism;gbkey=Gene;gene=ybaY;gene_biotype=pseudogene;locus_tag=SDY_0390;pseudo=true
NC_007606.1	RefSeq	gene	376262	376651	.	-	.	ID=gene389;Dbxref=GeneID:3799584;Name=ybaZ;Note=SDY0391;gbkey=Gene;gene=ybaZ;gene_biotype=protein_coding;locus_tag=SDY_0391
NC_007606.1	RefSeq	CDS	376262	376651	.	-	0	ID=cds345;Parent=gene389;Dbxref=Genbank:YP_402092.1,GeneID:3799584;Name=YP_402092.1;Note=Code: L%3B COG: COG3695;gbkey=CDS;gene=ybaZ;product=hypothetical protein;protein_id=YP_402092.1;transl_table=11
NC_007606.1	RefSeq	gene	376952	377305	.	+	.	ID=gene390;Dbxref=GeneID:3799585;Name=ybaA;Note=SDY0392;gbkey=Gene;gene=ybaA;gene_biotype=protein_coding;locus_tag=SDY_0392
NC_007606.1	RefSeq	CDS	376952	377305	.	+	0	ID=cds346;Parent=gene390;Dbxref=Genbank:YP_402093.1,GeneID:3799585;Name=YP_402093.1;Note=Code: S%3B COG: COG5507;gbkey=CDS;gene=ybaA;product=hypothetical protein;protein_id=YP_402093.1;transl_table=11
NC_007606.1	RefSeq	gene	377347	378660	.	-	.	ID=gene391;Dbxref=GeneID:3799586;Name=ylaB;Note=SDY0393;gbkey=Gene;gene=ylaB;gene_biotype=protein_coding;locus_tag=SDY_0393
NC_007606.1	RefSeq	CDS	377347	378660	.	-	0	ID=cds347;Parent=gene391;Dbxref=Genbank:YP_402094.1,GeneID:3799586;Name=YP_402094.1;Note=Code: T%3B COG: COG4943;gbkey=CDS;gene=ylaB;product=hypothetical protein;protein_id=YP_402094.1;transl_table=11
NC_007606.1	RefSeq	region	378675	379442	.	+	.	ID=id54;gbkey=mobile_element
NC_007606.1	RefSeq	gene	378730	379005	.	+	.	ID=gene392;Dbxref=GeneID:3799587;Name=insA;Note=SDY0394;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0394
NC_007606.1	RefSeq	CDS	378730	379005	.	+	0	ID=cds348;Parent=gene392;Dbxref=Genbank:YP_402095.1,GeneID:3799587;Name=YP_402095.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402095.1;transl_table=11
NC_007606.1	RefSeq	gene	379362	380921	.	-	.	ID=gene393;Dbxref=GeneID:3799588;Name=gcl;Note=SDY0395;gbkey=Gene;gene=gcl;gene_biotype=protein_coding;locus_tag=SDY_0395
NC_007606.1	RefSeq	CDS	379362	380921	.	-	0	ID=cds349;Parent=gene393;Dbxref=Genbank:YP_402096.1,GeneID:3799588;Name=YP_402096.1;Note=Code: R%3B COG: COG3960;gbkey=CDS;gene=gcl;product=glyoxylate carboligase;protein_id=YP_402096.1;transl_table=11
NC_007606.1	RefSeq	gene	381011	381826	.	-	.	ID=gene394;Dbxref=GeneID:3799589;Name=ybbU;Note=SDY0396;gbkey=Gene;gene=ybbU;gene_biotype=protein_coding;locus_tag=SDY_0396
NC_007606.1	RefSeq	CDS	381011	381826	.	-	0	ID=cds350;Parent=gene394;Dbxref=Genbank:YP_402097.1,GeneID:3799589;Name=YP_402097.1;Note=regulates operons involved in the utilization of allantoin;gbkey=CDS;gene=ybbU;product=DNA-binding transcriptional repressor AllR;protein_id=YP_402097.1;transl_table=11
NC_007606.1	RefSeq	gene	381904	382386	.	-	.	ID=gene395;Dbxref=GeneID:3799590;Name=ybbT;Note=SDY0397;gbkey=Gene;gene=ybbT;gene_biotype=protein_coding;locus_tag=SDY_0397
NC_007606.1	RefSeq	CDS	381904	382386	.	-	0	ID=cds351;Parent=gene395;Dbxref=Genbank:YP_402098.1,GeneID:3799590;Name=YP_402098.1;Note=catalyzes the formation of glyoxylate from (S)-ureidoglycolate;gbkey=CDS;gene=ybbT;product=ureidoglycolate hydrolase;protein_id=YP_402098.1;transl_table=11
NC_007606.1	RefSeq	gene	382615	383541	.	+	.	ID=gene396;Dbxref=GeneID:3799591;Name=ybbS;Note=SDY0398;gbkey=Gene;gene=ybbS;gene_biotype=protein_coding;locus_tag=SDY_0398
NC_007606.1	RefSeq	CDS	382615	383541	.	+	0	ID=cds352;Parent=gene396;Dbxref=Genbank:YP_402099.1,GeneID:3799591;Name=YP_402099.1;Note=activator of the allDC-ylbA operon involved in allantoin utilization;gbkey=CDS;gene=ybbS;product=DNA-binding transcriptional activator AllS;protein_id=YP_402099.1;transl_table=11
NC_007606.1	RefSeq	gene	383610	384704	.	+	.	ID=gene397;Dbxref=GeneID:3799592;Name=ybbB;Note=SDY0399;gbkey=Gene;gene=ybbB;gene_biotype=protein_coding;locus_tag=SDY_0399
NC_007606.1	RefSeq	CDS	383610	384704	.	+	0	ID=cds353;Parent=gene397;Dbxref=Genbank:YP_402100.1,GeneID:3799592;Name=YP_402100.1;Note=catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA;gbkey=CDS;gene=ybbB;product=tRNA 2-selenouridine synthase;protein_id=YP_402100.1;transl_table=11
NC_007606.1	RefSeq	gene	384784	385191	.	+	.	ID=gene398;Dbxref=GeneID:3799593;Name=SDY_0400;Note=SDY0400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0400
NC_007606.1	RefSeq	CDS	384784	385191	.	+	0	ID=cds354;Parent=gene398;Dbxref=Genbank:YP_402101.1,GeneID:3799593;Name=YP_402101.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402101.1;transl_table=11
NC_007606.1	RefSeq	region	385841	386608	.	+	.	ID=id55;gbkey=mobile_element
NC_007606.1	RefSeq	gene	385896	386171	.	+	.	ID=gene399;Dbxref=GeneID:3799594;Name=insA;Note=SDY0401;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0401
NC_007606.1	RefSeq	CDS	385896	386171	.	+	0	ID=cds355;Parent=gene399;Dbxref=Genbank:YP_402102.1,GeneID:3799594;Name=YP_402102.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402102.1;transl_table=11
NC_007606.1	RefSeq	gene	386216	386593	.	+	.	ID=gene400;Dbxref=GeneID:3799595;Name=insB;Note=SDY0402;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0402
NC_007606.1	RefSeq	CDS	386216	386593	.	+	0	ID=cds356;Parent=gene400;Dbxref=Genbank:YP_402103.1,GeneID:3799595;Name=YP_402103.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402103.1;transl_table=11
NC_007606.1	RefSeq	gene	386688	389103	.	-	.	ID=gene401;Dbxref=GeneID:3796150;Name=ybbP;Note=SDY0403%3B frameshift%3B original product:  oxidoreductase;gbkey=Gene;gene=ybbP;gene_biotype=pseudogene;locus_tag=SDY_0403;pseudo=true
NC_007606.1	RefSeq	gene	389100	389786	.	-	.	ID=gene402;Dbxref=GeneID:3796152;Name=ybbA;Note=SDY0405;gbkey=Gene;gene=ybbA;gene_biotype=protein_coding;locus_tag=SDY_0405
NC_007606.1	RefSeq	CDS	389100	389786	.	-	0	ID=cds357;Parent=gene402;Dbxref=Genbank:YP_402104.1,GeneID:3796152;Name=YP_402104.1;Note=Code: Q%3B COG: COG4181;gbkey=CDS;gene=ybbA;product=ABC transporter ATP-binding protein YbbA;protein_id=YP_402104.1;transl_table=11
NC_007606.1	RefSeq	gene	389754	390380	.	+	.	ID=gene403;Dbxref=GeneID:3796151;Name=tesA;Note=SDY0404;gbkey=Gene;gene=tesA;gene_biotype=protein_coding;locus_tag=SDY_0404
NC_007606.1	RefSeq	CDS	389754	390380	.	+	0	ID=cds358;Parent=gene403;Dbxref=Genbank:YP_402105.1,GeneID:3796151;Name=YP_402105.1;Note=Code: E%3B COG: COG2755;gbkey=CDS;gene=tesA;product=multifunctional acyl-CoA thioesterase I/protease I/lysophospholipase L1;protein_id=YP_402105.1;transl_table=11
NC_007606.1	RefSeq	gene	390370	391179	.	+	.	ID=gene404;Dbxref=GeneID:3796153;Name=ybbO;Note=SDY0406;gbkey=Gene;gene=ybbO;gene_biotype=protein_coding;locus_tag=SDY_0406
NC_007606.1	RefSeq	CDS	390370	391179	.	+	0	ID=cds359;Parent=gene404;Dbxref=Genbank:YP_402106.1,GeneID:3796153;Name=YP_402106.1;Note=Code: IQR%3B COG: COG1028;gbkey=CDS;gene=ybbO;product=short chain dehydrogenase;protein_id=YP_402106.1;transl_table=11
NC_007606.1	RefSeq	gene	391204	392094	.	+	.	ID=gene405;Dbxref=GeneID:3796154;Name=ybbN;Note=SDY0407;gbkey=Gene;gene=ybbN;gene_biotype=protein_coding;locus_tag=SDY_0407
NC_007606.1	RefSeq	CDS	391204	392094	.	+	0	ID=cds360;Parent=gene405;Dbxref=Genbank:YP_402107.1,GeneID:3796154;Name=YP_402107.1;Note=Code: O%3B COG: COG3118;gbkey=CDS;gene=ybbN;product=thioredoxin-like protein;protein_id=YP_402107.1;transl_table=11
NC_007606.1	RefSeq	gene	392157	392963	.	-	.	ID=gene406;Dbxref=GeneID:3796155;Name=ybbM;Note=SDY0408;gbkey=Gene;gene=ybbM;gene_biotype=protein_coding;locus_tag=SDY_0408
NC_007606.1	RefSeq	CDS	392157	392963	.	-	0	ID=cds361;Parent=gene406;Dbxref=Genbank:YP_402108.1,GeneID:3796155;Name=YP_402108.1;Note=Code: R%3B COG: COG0390;gbkey=CDS;gene=ybbM;product=metal resistance protein;protein_id=YP_402108.1;transl_table=11
NC_007606.1	RefSeq	gene	392923	393600	.	-	.	ID=gene407;Dbxref=GeneID:3796156;Name=ybbL;Note=SDY0409;gbkey=Gene;gene=ybbL;gene_biotype=protein_coding;locus_tag=SDY_0409
NC_007606.1	RefSeq	CDS	392923	393600	.	-	0	ID=cds362;Parent=gene407;Dbxref=Genbank:YP_402109.1,GeneID:3796156;Name=YP_402109.1;Note=Code: R%3B COG: COG4619;gbkey=CDS;gene=ybbL;product=ABC transporter ATP-binding protein YbbL;protein_id=YP_402109.1;transl_table=11
NC_007606.1	RefSeq	gene	393746	394663	.	+	.	ID=gene408;Dbxref=GeneID:3796157;Name=ybbK;Note=SDY0410;gbkey=Gene;gene=ybbK;gene_biotype=protein_coding;locus_tag=SDY_0410
NC_007606.1	RefSeq	CDS	393746	394663	.	+	0	ID=cds363;Parent=gene408;Dbxref=Genbank:YP_402110.1,GeneID:3796157;Name=YP_402110.1;Note=Code: O%3B COG: COG0330;gbkey=CDS;gene=ybbK;product=protease;protein_id=YP_402110.1;transl_table=11
NC_007606.1	RefSeq	gene	394660	395118	.	+	.	ID=gene409;Dbxref=GeneID:3796158;Name=ybbJ;Note=SDY0411;gbkey=Gene;gene=ybbJ;gene_biotype=protein_coding;locus_tag=SDY_0411
NC_007606.1	RefSeq	CDS	394660	395118	.	+	0	ID=cds364;Parent=gene409;Dbxref=Genbank:YP_402111.1,GeneID:3796158;Name=YP_402111.1;Note=Code: OU%3B COG: COG1585;gbkey=CDS;gene=ybbJ;product=hypothetical protein;protein_id=YP_402111.1;transl_table=11
NC_007606.1	RefSeq	gene	395198	395560	.	-	.	ID=gene410;Dbxref=GeneID:3796159;Name=SDY_0412;Note=SDY0412;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0412
NC_007606.1	RefSeq	CDS	395198	395560	.	-	0	ID=cds365;Parent=gene410;Dbxref=Genbank:YP_402112.1,GeneID:3796159;Name=YP_402112.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402112.1;transl_table=11
NC_007606.1	RefSeq	region	395936	396295	.	-	.	ID=id56;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	396296	397061	.	+	.	ID=id57;gbkey=mobile_element
NC_007606.1	RefSeq	gene	396353	396625	.	+	.	ID=gene411;Dbxref=GeneID:18262958;Name=SDY_0413a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0413a
NC_007606.1	RefSeq	CDS	396353	396625	.	+	0	ID=cds366;Parent=gene411;Dbxref=Genbank:YP_009000643.1,GeneID:18262958;Name=YP_009000643.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000643.1;transl_table=11
NC_007606.1	RefSeq	gene	396652	397047	.	+	.	ID=gene412;Dbxref=GeneID:3796161;Name=SDY_0414;Note=SDY0414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0414
NC_007606.1	RefSeq	CDS	396652	397047	.	+	0	ID=cds367;Parent=gene412;Dbxref=Genbank:YP_402114.1,GeneID:3796161;Name=YP_402114.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402114.1;transl_table=11
NC_007606.1	RefSeq	gene	397196	397603	.	-	.	ID=gene413;Dbxref=GeneID:3796162;Name=ybbI;Note=SDY0415;gbkey=Gene;gene=ybbI;gene_biotype=protein_coding;locus_tag=SDY_0415
NC_007606.1	RefSeq	CDS	397196	397603	.	-	0	ID=cds368;Parent=gene413;Dbxref=Genbank:YP_402115.1,GeneID:3796162;Name=YP_402115.1;Note=activator of copper-responsive regulon genes;gbkey=CDS;gene=ybbI;product=DNA-binding transcriptional regulator CueR;protein_id=YP_402115.1;transl_table=11
NC_007606.1	RefSeq	gene	397600	398775	.	-	.	ID=gene414;Dbxref=GeneID:3796163;Name=SDY_0416;Note=SDY0416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0416
NC_007606.1	RefSeq	CDS	397600	398775	.	-	0	ID=cds369;Parent=gene414;Dbxref=Genbank:YP_402116.1,GeneID:3796163;Name=YP_402116.1;Note=Code: M%3B COG: COG0845;gbkey=CDS;product=membrane spanning export protein;protein_id=YP_402116.1;transl_table=11
NC_007606.1	RefSeq	gene	398772	400298	.	-	.	ID=gene415;Dbxref=GeneID:3796164;Name=SDY_0417;Note=SDY0417;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0417
NC_007606.1	RefSeq	CDS	398772	400298	.	-	0	ID=cds370;Parent=gene415;Dbxref=Genbank:YP_402117.1,GeneID:3796164;Name=YP_402117.1;Note=Code: V%3B COG: COG2274;gbkey=CDS;product=cytoplasmic membrane export protein;protein_id=YP_402117.1;transl_table=11
NC_007606.1	RefSeq	gene	400936	411472	.	-	.	ID=gene416;Dbxref=GeneID:3796168;Name=SDY_0421;Note=SDY0421;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0421;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	411486	415765	.	-	.	ID=gene417;Dbxref=GeneID:3799094;Name=SDY_0424;Note=SDY0424;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0424;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	415867	416641	.	+	.	ID=id58;gbkey=mobile_element
NC_007606.1	RefSeq	gene	415932	416204	.	+	.	ID=gene418;Dbxref=GeneID:18262959;Name=SDY_0427a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0427a
NC_007606.1	RefSeq	CDS	415932	416204	.	+	0	ID=cds371;Parent=gene418;Dbxref=Genbank:YP_009000644.1,GeneID:18262959;Name=YP_009000644.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000644.1;transl_table=11
NC_007606.1	RefSeq	gene	416231	416626	.	+	.	ID=gene419;Dbxref=GeneID:3799097;Name=SDY_0427;Note=SDY0427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0427
NC_007606.1	RefSeq	CDS	416231	416626	.	+	0	ID=cds372;Parent=gene419;Dbxref=Genbank:YP_402127.1,GeneID:3799097;Name=YP_402127.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402127.1;transl_table=11
NC_007606.1	RefSeq	gene	416643	417734	.	-	.	ID=gene420;Dbxref=GeneID:3799098;Name=SDY_0428;Note=SDY0428;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0428;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	417599	418366	.	+	.	ID=id59;gbkey=mobile_element
NC_007606.1	RefSeq	gene	417654	417929	.	+	.	ID=gene421;Dbxref=GeneID:3799100;Name=insA;Note=SDY0430;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0430;pseudogene=unknown
NC_007606.1	RefSeq	CDS	417654	417929	.	+	0	ID=cds373;Parent=gene421;Dbxref=Genbank:YP_402130.1,GeneID:3799100;Name=YP_402130.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402130.1;transl_table=11
NC_007606.1	RefSeq	gene	417974	418351	.	+	.	ID=gene422;Dbxref=GeneID:3799101;Name=insB;Note=SDY0431;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0431
NC_007606.1	RefSeq	CDS	417974	418351	.	+	0	ID=cds374;Parent=gene422;Dbxref=Genbank:YP_009000645.1,GeneID:3799101;Name=YP_009000645.1;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_009000645.1;transl_table=11
NC_007606.1	RefSeq	gene	418512	419804	.	-	.	ID=gene423;Dbxref=GeneID:3799102;Name=ybaT;Note=SDY0432;gbkey=Gene;gene=ybaT;gene_biotype=protein_coding;locus_tag=SDY_0432
NC_007606.1	RefSeq	CDS	418512	419804	.	-	0	ID=cds375;Parent=gene423;Dbxref=Genbank:YP_402132.1,GeneID:3799102;Name=YP_402132.1;Note=Code: E%3B COG: COG0531;gbkey=CDS;gene=ybaT;product=amino acid/amine transport protein;protein_id=YP_402132.1;transl_table=11
NC_007606.1	RefSeq	gene	419807	420740	.	-	.	ID=gene424;Dbxref=GeneID:3799103;Name=ybaS;Note=SDY0433%3B frameshift%3B original product:  glutaminase;gbkey=Gene;gene=ybaS;gene_biotype=pseudogene;locus_tag=SDY_0433;pseudo=true
NC_007606.1	RefSeq	gene	421002	423506	.	+	.	ID=gene425;Dbxref=GeneID:3799104;Name=copA;Note=SDY0434;gbkey=Gene;gene=copA;gene_biotype=protein_coding;locus_tag=SDY_0434
NC_007606.1	RefSeq	CDS	421002	423506	.	+	0	ID=cds376;Parent=gene425;Dbxref=Genbank:YP_402133.1,GeneID:3799104;Name=YP_402133.1;Note=Code: P%3B COG: COG2217;gbkey=CDS;gene=copA;product=copper exporting ATPase;protein_id=YP_402133.1;transl_table=11
NC_007606.1	RefSeq	gene	423620	424015	.	-	.	ID=gene426;Dbxref=GeneID:3799105;Name=ybaQ;Note=SDY0435;gbkey=Gene;gene=ybaQ;gene_biotype=protein_coding;locus_tag=SDY_0435
NC_007606.1	RefSeq	CDS	423620	424015	.	-	0	ID=cds377;Parent=gene426;Dbxref=Genbank:YP_402134.1,GeneID:3799105;Name=YP_402134.1;Note=Code: R%3B COG: COG3093;gbkey=CDS;gene=ybaQ;product=hypothetical protein;protein_id=YP_402134.1;transl_table=11
NC_007606.1	RefSeq	gene	424099	424893	.	+	.	ID=gene427;Dbxref=GeneID:3799106;Name=ybaP;Note=SDY0436;gbkey=Gene;gene=ybaP;gene_biotype=protein_coding;locus_tag=SDY_0436
NC_007606.1	RefSeq	CDS	424099	424893	.	+	0	ID=cds378;Parent=gene427;Dbxref=Genbank:YP_402135.1,GeneID:3799106;Name=YP_402135.1;Note=Code: S%3B COG: COG3735;gbkey=CDS;gene=ybaP;product=ligase;protein_id=YP_402135.1;transl_table=11
NC_007606.1	RefSeq	gene	425097	425576	.	+	.	ID=gene428;Dbxref=GeneID:3799107;Name=ybaK;Note=SDY0437;gbkey=Gene;gene=ybaK;gene_biotype=protein_coding;locus_tag=SDY_0437
NC_007606.1	RefSeq	CDS	425097	425576	.	+	0	ID=cds379;Parent=gene428;Dbxref=Genbank:YP_402136.1,GeneID:3799107;Name=YP_402136.1;Note=Code: S%3B COG: COG2606;gbkey=CDS;gene=ybaK;product=hypothetical protein;protein_id=YP_402136.1;transl_table=11
NC_007606.1	RefSeq	gene	425613	427265	.	-	.	ID=gene429;Dbxref=GeneID:3799108;Name=ushA;Note=SDY0438;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=SDY_0438
NC_007606.1	RefSeq	CDS	425613	427265	.	-	0	ID=cds380;Parent=gene429;Dbxref=Genbank:YP_402137.1,GeneID:3799108;Name=YP_402137.1;Note=''catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides'';gbkey=CDS;gene=ushA;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic;protein_id=YP_402137.1;transl_table=11
NC_007606.1	RefSeq	gene	427483	430142	.	+	.	ID=gene430;Dbxref=GeneID:3799109;Name=fsr;Note=SDY0439%3B contains IS4 insertion%3B original product: fosmidomycin resistance protein;gbkey=Gene;gene=fsr;gene_biotype=pseudogene;locus_tag=SDY_0439;pseudo=true
NC_007606.1	RefSeq	region	427696	429122	.	-	.	ID=id60;gbkey=mobile_element;gene=fsr
NC_007606.1	RefSeq	gene	427709	429055	.	-	.	ID=gene431;Dbxref=GeneID:3799110;Name=SDY_0440;Note=SDY0440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0440
NC_007606.1	RefSeq	CDS	427709	429055	.	-	0	ID=cds381;Parent=gene431;Dbxref=Genbank:YP_402138.1,GeneID:3799110;Name=YP_402138.1;Note=Code: L%3B COG: COG3385;gbkey=CDS;product=insertion sequence element IS4 transposase InsG;protein_id=YP_402138.1;transl_table=11
NC_007606.1	RefSeq	gene	430380	432056	.	+	.	ID=gene432;Dbxref=GeneID:3799111;Name=ybaL;Note=SDY0441;gbkey=Gene;gene=ybaL;gene_biotype=protein_coding;locus_tag=SDY_0441
NC_007606.1	RefSeq	CDS	430380	432056	.	+	0	ID=cds382;Parent=gene432;Dbxref=Genbank:YP_402139.1,GeneID:3799111;Name=YP_402139.1;Note=YbaL%3B member of the CPA-2 family of antiporters%3B uncharacterized protein;gbkey=CDS;gene=ybaL;product=cation:proton antiport protein;protein_id=YP_402139.1;transl_table=11
NC_007606.1	RefSeq	gene	432190	433494	.	-	.	ID=gene433;Dbxref=GeneID:3798060;Name=gsk;Note=SDY0442;gbkey=Gene;gene=gsk;gene_biotype=protein_coding;locus_tag=SDY_0442
NC_007606.1	RefSeq	CDS	432190	433494	.	-	0	ID=cds383;Parent=gene433;Dbxref=Genbank:YP_402140.1,GeneID:3798060;Name=YP_402140.1;Note=Code: G%3B COG: COG0524;gbkey=CDS;gene=gsk;product=inosine-guanosine kinase;protein_id=YP_402140.1;transl_table=11
NC_007606.1	RefSeq	gene	433646	434605	.	+	.	ID=gene434;Dbxref=GeneID:3798061;Name=ybaC;Note=SDY0443%3B contains in-frame stop codon%3B original product:  lipase (EC 3.1.1.-);gbkey=Gene;gene=ybaC;gene_biotype=pseudogene;locus_tag=SDY_0443;pseudo=true
NC_007606.1	RefSeq	gene	434602	435564	.	-	.	ID=gene435;Dbxref=GeneID:3798062;Name=hemH;Note=SDY0444;gbkey=Gene;gene=hemH;gene_biotype=protein_coding;locus_tag=SDY_0444
NC_007606.1	RefSeq	CDS	434602	435564	.	-	0	ID=cds384;Parent=gene435;Dbxref=Genbank:YP_402141.1,GeneID:3798062;Name=YP_402141.1;Note=protoheme ferro-lyase%3B catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme%3B involved in protoheme biosynthesis%3B in some organisms this protein is membrane-associated while in others it is cytosolic;gbkey=CDS;gene=hemH;product=ferrochelatase;protein_id=YP_402141.1;transl_table=11
NC_007606.1	RefSeq	gene	435696	436340	.	-	.	ID=gene436;Dbxref=GeneID:3798063;Name=adk;Note=SDY0445;gbkey=Gene;gene=adk;gene_biotype=protein_coding;locus_tag=SDY_0445
NC_007606.1	RefSeq	CDS	435696	436340	.	-	0	ID=cds385;Parent=gene436;Dbxref=Genbank:YP_402142.1,GeneID:3798063;Name=YP_402142.1;Note=essential enzyme that recycles AMP in active cells%3B converts ATP and AMP to two molecules of ADP;gbkey=CDS;gene=adk;product=adenylate kinase;protein_id=YP_402142.1;transl_table=11
NC_007606.1	RefSeq	gene	436521	438395	.	-	.	ID=gene437;Dbxref=GeneID:3798064;Name=htpG;Note=SDY0446;gbkey=Gene;gene=htpG;gene_biotype=protein_coding;locus_tag=SDY_0446
NC_007606.1	RefSeq	CDS	436521	438395	.	-	0	ID=cds386;Parent=gene437;Dbxref=Genbank:YP_402143.1,GeneID:3798064;Name=YP_402143.1;Note=molecular chaperone;gbkey=CDS;gene=htpG;product=heat shock protein 90;protein_id=YP_402143.1;transl_table=11
NC_007606.1	RefSeq	gene	438505	439110	.	-	.	ID=gene438;Dbxref=GeneID:3798065;Name=recR;Note=SDY0447;gbkey=Gene;gene=recR;gene_biotype=protein_coding;locus_tag=SDY_0447
NC_007606.1	RefSeq	CDS	438505	439110	.	-	0	ID=cds387;Parent=gene438;Dbxref=Genbank:YP_402144.1,GeneID:3798065;Name=YP_402144.1;Note=''involved in a recombinational process of DNA repair%2C independent of the recBC complex'';gbkey=CDS;gene=recR;product=recombination protein RecR;protein_id=YP_402144.1;transl_table=11
NC_007606.1	RefSeq	gene	439110	439439	.	-	.	ID=gene439;Dbxref=GeneID:3798066;Name=ybaB;Note=SDY0448;gbkey=Gene;gene=ybaB;gene_biotype=protein_coding;locus_tag=SDY_0448
NC_007606.1	RefSeq	CDS	439110	439439	.	-	0	ID=cds388;Parent=gene439;Dbxref=Genbank:YP_402145.1,GeneID:3798066;Name=YP_402145.1;Note=Code: S%3B COG: COG0718;gbkey=CDS;gene=ybaB;product=hypothetical protein;protein_id=YP_402145.1;transl_table=11
NC_007606.1	RefSeq	gene	439492	441423	.	-	.	ID=gene440;Dbxref=GeneID:3798067;Name=dnaX;Note=SDY0449;gbkey=Gene;gene=dnaX;gene_biotype=protein_coding;locus_tag=SDY_0449
NC_007606.1	RefSeq	CDS	439492	441423	.	-	0	ID=cds389;Parent=gene440;Dbxref=Genbank:YP_402146.1,GeneID:3798067;Name=YP_402146.1;Note=''catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the tau chain serves as a scaffold to help in the dimerizaton of the alpha%2Cepsilon and theta core complex%3B the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA'';gbkey=CDS;gene=dnaX;product=DNA polymerase III subunits gamma and tau;protein_id=YP_402146.1;transl_table=11
NC_007606.1	RefSeq	gene	441552	442103	.	-	.	ID=gene441;Dbxref=GeneID:3798068;Name=apt;Note=SDY0450;gbkey=Gene;gene=apt;gene_biotype=protein_coding;locus_tag=SDY_0450
NC_007606.1	RefSeq	CDS	441552	442103	.	-	0	ID=cds390;Parent=gene441;Dbxref=Genbank:YP_402147.1,GeneID:3798068;Name=YP_402147.1;Note=catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis;gbkey=CDS;gene=apt;product=adenine phosphoribosyltransferase;protein_id=YP_402147.1;transl_table=11
NC_007606.1	RefSeq	gene	442256	442633	.	-	.	ID=gene442;Dbxref=GeneID:3798069;Name=ybaN;Note=SDY0451;gbkey=Gene;gene=ybaN;gene_biotype=protein_coding;locus_tag=SDY_0451
NC_007606.1	RefSeq	CDS	442256	442633	.	-	0	ID=cds391;Parent=gene442;Dbxref=Genbank:YP_402148.1,GeneID:3798069;Name=YP_402148.1;Note=Code: S%3B COG: COG2832;gbkey=CDS;gene=ybaN;product=hypothetical protein;protein_id=YP_402148.1;transl_table=11
NC_007606.1	RefSeq	gene	442703	443230	.	+	.	ID=gene443;Dbxref=GeneID:3798070;Name=priC;Note=SDY0452;gbkey=Gene;gene=priC;gene_biotype=protein_coding;locus_tag=SDY_0452
NC_007606.1	RefSeq	CDS	442703	443230	.	+	0	ID=cds392;Parent=gene443;Dbxref=Genbank:YP_402149.1,GeneID:3798070;Name=YP_402149.1;Note=''PriC%3B protein involved in DNA replication%3B part of the primosome%2C a protein complex required to restart stalled replication forks%3B binds the complex formed by PriA%2C PriB and DNA%3B PriC-dependent primosome requires a gap to restart DNA replication%3B stimulates Rep activity at stalled forks'';gbkey=CDS;gene=priC;product=primosomal replication protein N'';protein_id=YP_402149.1;transl_table=11
NC_007606.1	RefSeq	gene	443244	443408	.	+	.	ID=gene444;Dbxref=GeneID:3798071;Name=ybaM;Note=SDY0453;gbkey=Gene;gene=ybaM;gene_biotype=protein_coding;locus_tag=SDY_0453
NC_007606.1	RefSeq	CDS	443244	443408	.	+	0	ID=cds393;Parent=gene444;Dbxref=Genbank:YP_402150.1,GeneID:3798071;Name=YP_402150.1;gbkey=CDS;gene=ybaM;product=hypothetical protein;protein_id=YP_402150.1;transl_table=11
NC_007606.1	RefSeq	gene	443447	446809	.	-	.	ID=gene445;Dbxref=GeneID:3798072;Name=aefA;Note=SDY0454;gbkey=Gene;gene=aefA;gene_biotype=protein_coding;locus_tag=SDY_0454
NC_007606.1	RefSeq	CDS	443447	446809	.	-	0	ID=cds394;Parent=gene445;Dbxref=Genbank:YP_402151.1,GeneID:3798072;Name=YP_402151.1;Note=small mechanosensitive ion channel (MscS) that opens in response to stretch forces in the membrane lipid bilayer%3B maintains cell turgor through accumulation and release of potassium%3B large protein class of MscS;gbkey=CDS;gene=aefA;product=potassium efflux protein KefA;protein_id=YP_402151.1;transl_table=11
NC_007606.1	RefSeq	gene	446937	447584	.	-	.	ID=gene446;Dbxref=GeneID:3798073;Name=acrR;Note=SDY0455;gbkey=Gene;gene=acrR;gene_biotype=protein_coding;locus_tag=SDY_0455
NC_007606.1	RefSeq	CDS	446937	447584	.	-	0	ID=cds395;Parent=gene446;Dbxref=Genbank:YP_402152.1,GeneID:3798073;Name=YP_402152.1;Note=regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine;gbkey=CDS;gene=acrR;product=DNA-binding transcriptional repressor AcrR;protein_id=YP_402152.1;transl_table=11
NC_007606.1	RefSeq	gene	447726	448919	.	+	.	ID=gene447;Dbxref=GeneID:3798074;Name=acrA;Note=SDY0456;gbkey=Gene;gene=acrA;gene_biotype=protein_coding;locus_tag=SDY_0456
NC_007606.1	RefSeq	CDS	447726	448919	.	+	0	ID=cds396;Parent=gene447;Dbxref=Genbank:YP_402153.1,GeneID:3798074;Name=YP_402153.1;Note=Code: M%3B COG: COG0845;gbkey=CDS;gene=acrA;product=acridine efflux pump;protein_id=YP_402153.1;transl_table=11
NC_007606.1	RefSeq	gene	448942	452091	.	+	.	ID=gene448;Dbxref=GeneID:3798075;Name=acrB;Note=SDY0457;gbkey=Gene;gene=acrB;gene_biotype=protein_coding;locus_tag=SDY_0457
NC_007606.1	RefSeq	CDS	448942	452091	.	+	0	ID=cds397;Parent=gene448;Dbxref=Genbank:YP_402154.1,GeneID:3798075;Name=YP_402154.1;Note=Code: V%3B COG: COG0841;gbkey=CDS;gene=acrB;product=acridine efflux pump;protein_id=YP_402154.1;transl_table=11
NC_007606.1	RefSeq	gene	452637	453011	.	+	.	ID=gene449;Dbxref=GeneID:3798076;Name=ybaJ;Note=SDY0458;gbkey=Gene;gene=ybaJ;gene_biotype=protein_coding;locus_tag=SDY_0458
NC_007606.1	RefSeq	CDS	452637	453011	.	+	0	ID=cds398;Parent=gene449;Dbxref=Genbank:YP_402155.1,GeneID:3798076;Name=YP_402155.1;gbkey=CDS;gene=ybaJ;product=hypothetical protein;protein_id=YP_402155.1;transl_table=11
NC_007606.1	RefSeq	gene	453037	453255	.	+	.	ID=gene450;Dbxref=GeneID:3798077;Name=hha;Note=SDY0459;gbkey=Gene;gene=hha;gene_biotype=protein_coding;locus_tag=SDY_0459
NC_007606.1	RefSeq	CDS	453037	453255	.	+	0	ID=cds399;Parent=gene450;Dbxref=Genbank:YP_402156.1,GeneID:3798077;Name=YP_402156.1;Note=with Hns involved in transcriptional regulation of hemolysin%3B non-specific DNA-binding protein which affects the production of multiple proteins;gbkey=CDS;gene=hha;product=hemolysin expression-modulating protein;protein_id=YP_402156.1;transl_table=11
NC_007606.1	RefSeq	gene	453427	453978	.	+	.	ID=gene451;Dbxref=GeneID:3798078;Name=ylaD;Note=SDY0460;gbkey=Gene;gene=ylaD;gene_biotype=protein_coding;locus_tag=SDY_0460
NC_007606.1	RefSeq	CDS	453427	453978	.	+	0	ID=cds400;Parent=gene451;Dbxref=Genbank:YP_402157.1,GeneID:3798078;Name=YP_402157.1;Note=Code: R%3B COG: COG0110;gbkey=CDS;gene=ylaD;product=maltose O-acetyltransferase;protein_id=YP_402157.1;transl_table=11
NC_007606.1	RefSeq	gene	454055	454564	.	+	.	ID=gene452;Dbxref=GeneID:3798079;Name=ylaC;Note=SDY0461;gbkey=Gene;gene=ylaC;gene_biotype=protein_coding;locus_tag=SDY_0461
NC_007606.1	RefSeq	CDS	454055	454564	.	+	0	ID=cds401;Parent=gene452;Dbxref=Genbank:YP_402158.1,GeneID:3798079;Name=YP_402158.1;gbkey=CDS;gene=ylaC;product=hypothetical protein;protein_id=YP_402158.1;transl_table=11
NC_007606.1	RefSeq	gene	454728	454928	.	+	.	ID=gene453;Dbxref=GeneID:3796170;Name=SDY_0462;Note=SDY0462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0462
NC_007606.1	RefSeq	CDS	454728	454928	.	+	0	ID=cds402;Parent=gene453;Dbxref=Genbank:YP_402159.1,GeneID:3796170;Name=YP_402159.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402159.1;transl_table=11
NC_007606.1	RefSeq	region	454926	456256	.	+	.	ID=id61;gbkey=mobile_element
NC_007606.1	RefSeq	gene	455017	455382	.	+	.	ID=gene454;Dbxref=GeneID:3796171;Name=SDY_0463;Note=SDY0463;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0463
NC_007606.1	RefSeq	CDS	455017	455382	.	+	0	ID=cds403;Parent=gene454;Dbxref=Genbank:YP_402160.1,GeneID:3796171;Name=YP_402160.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_402160.1;transl_table=11
NC_007606.1	RefSeq	gene	455340	456245	.	+	.	ID=gene455;Dbxref=GeneID:3796172;Name=SDY_0464;Note=SDY0464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0464
NC_007606.1	RefSeq	CDS	455340	456245	.	+	0	ID=cds404;Parent=gene455;Dbxref=Genbank:YP_402161.2,GeneID:3796172;Name=YP_402161.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_402161.2;transl_table=11
NC_007606.1	RefSeq	region	456296	457063	.	-	.	ID=id62;gbkey=mobile_element
NC_007606.1	RefSeq	gene	456311	456688	.	-	.	ID=gene456;Dbxref=GeneID:3796173;Name=insB;Note=SDY0465;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0465
NC_007606.1	RefSeq	CDS	456311	456688	.	-	0	ID=cds405;Parent=gene456;Dbxref=Genbank:YP_402162.1,GeneID:3796173;Name=YP_402162.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402162.1;transl_table=11
NC_007606.1	RefSeq	gene	456733	457008	.	-	.	ID=gene457;Dbxref=GeneID:3796174;Name=insA;Note=SDY0466;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0466
NC_007606.1	RefSeq	CDS	456733	457008	.	-	0	ID=cds406;Parent=gene457;Dbxref=Genbank:YP_402163.1,GeneID:3796174;Name=YP_402163.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402163.1;transl_table=11
NC_007606.1	RefSeq	region	457249	458498	.	+	.	ID=id63;gbkey=mobile_element
NC_007606.1	RefSeq	gene	457321	457623	.	+	.	ID=gene458;Dbxref=GeneID:3796175;Name=SDY_0467;Note=SDY0467;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0467
NC_007606.1	RefSeq	CDS	457321	457623	.	+	0	ID=cds407;Parent=gene458;Dbxref=Genbank:YP_402164.1,GeneID:3796175;Name=YP_402164.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_402164.1;transl_table=11
NC_007606.1	RefSeq	gene	457836	458490	.	+	.	ID=gene459;Dbxref=GeneID:3796177;Name=SDY_0469;Note=SDY0469;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0469;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	458612	459377	.	+	.	ID=id64;gbkey=mobile_element
NC_007606.1	RefSeq	gene	458669	458941	.	+	.	ID=gene460;Dbxref=GeneID:18262960;Name=SDY_0470a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0470a
NC_007606.1	RefSeq	CDS	458669	458941	.	+	0	ID=cds408;Parent=gene460;Dbxref=Genbank:YP_009000646.1,GeneID:18262960;Name=YP_009000646.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000646.1;transl_table=11
NC_007606.1	RefSeq	gene	458968	459363	.	+	.	ID=gene461;Dbxref=GeneID:3796178;Name=SDY_0470;Note=SDY0470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0470
NC_007606.1	RefSeq	CDS	458968	459363	.	+	0	ID=cds409;Parent=gene461;Dbxref=Genbank:YP_402167.1,GeneID:3796178;Name=YP_402167.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402167.1;transl_table=11
NC_007606.1	RefSeq	gene	459360	460315	.	-	.	ID=gene462;Dbxref=GeneID:3796179;Name=SDY_0471;Note=SDY0471;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0471;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	460403	460478	.	-	.	ID=gene463;Dbxref=GeneID:3796180;Name=SDY_0472;Note=SDY0472;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0472
NC_007606.1	RefSeq	tRNA	460403	460478	.	-	.	ID=rna8;Parent=gene463;Dbxref=GeneID:3796180;codons=39;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	exon	460403	460478	.	-	.	ID=id65;Parent=rna8;Dbxref=GeneID:3796180;codons=39;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	gene	460593	461846	.	-	.	ID=gene464;Dbxref=GeneID:3796181;Name=proA;Note=SDY0473;gbkey=Gene;gene=proA;gene_biotype=protein_coding;locus_tag=SDY_0473
NC_007606.1	RefSeq	CDS	460593	461846	.	-	0	ID=cds410;Parent=gene464;Dbxref=Genbank:YP_402169.1,GeneID:3796181;Name=YP_402169.1;Note=Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway;gbkey=CDS;gene=proA;product=gamma-glutamyl phosphate reductase;protein_id=YP_402169.1;transl_table=11
NC_007606.1	RefSeq	gene	461858	462961	.	-	.	ID=gene465;Dbxref=GeneID:3796182;Name=proB;Note=SDY0474;gbkey=Gene;gene=proB;gene_biotype=protein_coding;locus_tag=SDY_0474
NC_007606.1	RefSeq	CDS	461858	462961	.	-	0	ID=cds411;Parent=gene465;Dbxref=Genbank:YP_402170.1,GeneID:3796182;Name=YP_402170.1;Note=catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis;gbkey=CDS;gene=proB;product=gamma-glutamyl kinase;protein_id=YP_402170.1;transl_table=11
NC_007606.1	RefSeq	region	463134	463901	.	+	.	ID=id66;gbkey=mobile_element
NC_007606.1	RefSeq	gene	463189	463464	.	+	.	ID=gene466;Dbxref=GeneID:3796183;Name=insA;Note=SDY0475;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0475
NC_007606.1	RefSeq	CDS	463189	463464	.	+	0	ID=cds412;Parent=gene466;Dbxref=Genbank:YP_402171.1,GeneID:3796183;Name=YP_402171.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402171.1;transl_table=11
NC_007606.1	RefSeq	gene	463509	463886	.	+	.	ID=gene467;Dbxref=GeneID:3796184;Name=insB;Note=SDY0476;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0476
NC_007606.1	RefSeq	CDS	463509	463886	.	+	0	ID=cds413;Parent=gene467;Dbxref=Genbank:YP_402172.1,GeneID:3796184;Name=YP_402172.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402172.1;transl_table=11
NC_007606.1	RefSeq	gene	463961	464362	.	-	.	ID=gene468;Dbxref=GeneID:3796185;Name=crl;Note=SDY0477;gbkey=Gene;gene=crl;gene_biotype=protein_coding;locus_tag=SDY_0477
NC_007606.1	RefSeq	CDS	463961	464362	.	-	0	ID=cds414;Parent=gene468;Dbxref=Genbank:YP_402173.1,GeneID:3796185;Name=YP_402173.1;Note=involved in the expression of csgBA which is involved in curli formation%3B interacts with sigmaS;gbkey=CDS;gene=crl;product=DNA-binding transcriptional regulator Crl;protein_id=YP_402173.1;transl_table=11
NC_007606.1	RefSeq	gene	464420	465664	.	-	.	ID=gene469;Dbxref=GeneID:3796186;Name=frsA;Note=SDY0478;gbkey=Gene;gene=frsA;gene_biotype=protein_coding;locus_tag=SDY_0478
NC_007606.1	RefSeq	CDS	464420	465664	.	-	0	ID=cds415;Parent=gene469;Dbxref=Genbank:YP_402174.1,GeneID:3796186;Name=YP_402174.1;Note=forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc%3B FrsA may promote fermentation;gbkey=CDS;gene=frsA;product=fermentation/respiration switch protein;protein_id=YP_402174.1;transl_table=11
NC_007606.1	RefSeq	gene	465756	466214	.	-	.	ID=gene470;Dbxref=GeneID:3796187;Name=gpt;Note=SDY0479;gbkey=Gene;gene=gpt;gene_biotype=protein_coding;locus_tag=SDY_0479
NC_007606.1	RefSeq	CDS	465756	466214	.	-	0	ID=cds416;Parent=gene470;Dbxref=Genbank:YP_402175.1,GeneID:3796187;Name=YP_402175.1;Note=''catalyzes the conversion of guanine%2C xanthine and%2C to a lesser extent%2C hypoxanthine to GMP%2C XMP and IMP%2C respectively'';gbkey=CDS;gene=gpt;product=xanthine-guanine phosphoribosyltransferase;protein_id=YP_402175.1;transl_table=11
NC_007606.1	RefSeq	gene	466475	467932	.	+	.	ID=gene471;Dbxref=GeneID:3796079;Name=pepD;Note=SDY0480;gbkey=Gene;gene=pepD;gene_biotype=protein_coding;locus_tag=SDY_0480
NC_007606.1	RefSeq	CDS	466475	467932	.	+	0	ID=cds417;Parent=gene471;Dbxref=Genbank:YP_402176.1,GeneID:3796079;Name=YP_402176.1;Note=Code: E%3B COG: COG2195;gbkey=CDS;gene=pepD;product=aminoacyl-histidine dipeptidase;protein_id=YP_402176.1;transl_table=11
NC_007606.1	RefSeq	gene	467989	468489	.	-	.	ID=gene472;Dbxref=GeneID:3796080;Name=prfH;Note=SDY0481;gbkey=Gene;gene=prfH;gene_biotype=protein_coding;locus_tag=SDY_0481
NC_007606.1	RefSeq	CDS	467989	468489	.	-	0	ID=cds418;Parent=gene472;Dbxref=Genbank:YP_402177.1,GeneID:3796080;Name=YP_402177.1;gbkey=CDS;gene=prfH;product=peptide chain release factor-like protein;protein_id=YP_402177.1;transl_table=11
NC_007606.1	RefSeq	gene	468458	468724	.	-	.	ID=gene473;Dbxref=GeneID:3796081;Name=SDY_0482;Note=SDY0482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0482
NC_007606.1	RefSeq	CDS	468458	468724	.	-	0	ID=cds419;Parent=gene473;Dbxref=Genbank:YP_402178.1,GeneID:3796081;Name=YP_402178.1;Note=Code: S%3B COG: COG1690;gbkey=CDS;product=hypothetical protein;protein_id=YP_402178.1;transl_table=11
NC_007606.1	RefSeq	gene	469480	470535	.	-	.	ID=gene474;Dbxref=GeneID:3796082;Name=dinP;Note=SDY0483;gbkey=Gene;gene=dinP;gene_biotype=protein_coding;locus_tag=SDY_0483
NC_007606.1	RefSeq	CDS	469480	470535	.	-	0	ID=cds420;Parent=gene474;Dbxref=Genbank:YP_402179.1,GeneID:3796082;Name=YP_402179.1;Note=involved in translesion DNA polymerization with beta clamp of polymerase III%3B belongs to Y family of polymerases%3B does not contain proofreading function;gbkey=CDS;gene=dinP;product=DNA polymerase IV;protein_id=YP_402179.1;transl_table=11
NC_007606.1	RefSeq	gene	470606	471385	.	-	.	ID=gene475;Dbxref=GeneID:3796083;Name=mbhA;Note=SDY0484;gbkey=Gene;gene=mbhA;gene_biotype=protein_coding;locus_tag=SDY_0484
NC_007606.1	RefSeq	CDS	470606	471385	.	-	0	ID=cds421;Parent=gene475;Dbxref=Genbank:YP_402180.1,GeneID:3796083;Name=YP_402180.1;Note=Code: N%3B COG: COG1360;gbkey=CDS;gene=mbhA;product=hypothetical protein;protein_id=YP_402180.1;transl_table=11
NC_007606.1	RefSeq	gene	471532	472275	.	-	.	ID=gene476;Dbxref=GeneID:3796084;Name=SDY_0485;Note=SDY0485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0485
NC_007606.1	RefSeq	CDS	471532	472275	.	-	0	ID=cds422;Parent=gene476;Dbxref=Genbank:YP_402181.1,GeneID:3796084;Name=YP_402181.1;Note=Code: N%3B COG: COG1291;gbkey=CDS;product=flagellar motor transmembrane channel protein;protein_id=YP_402181.1;transl_table=11
NC_007606.1	RefSeq	region	472141	472906	.	+	.	ID=id67;gbkey=mobile_element
NC_007606.1	RefSeq	gene	472198	472470	.	+	.	ID=gene477;Dbxref=GeneID:18262961;Name=SDY_0485a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0485a
NC_007606.1	RefSeq	CDS	472198	472470	.	+	0	ID=cds423;Parent=gene477;Dbxref=Genbank:YP_009000647.1,GeneID:18262961;Name=YP_009000647.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000647.1;transl_table=11
NC_007606.1	RefSeq	gene	472497	472892	.	+	.	ID=gene478;Dbxref=GeneID:3796085;Name=SDY_0486;Note=SDY0486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0486
NC_007606.1	RefSeq	CDS	472497	472892	.	+	0	ID=cds424;Parent=gene478;Dbxref=Genbank:YP_402182.1,GeneID:3796085;Name=YP_402182.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402182.1;transl_table=11
NC_007606.1	RefSeq	gene	473162	473449	.	+	.	ID=gene479;Dbxref=GeneID:3796086;Name=insA;Note=SDY0487;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0487
NC_007606.1	RefSeq	CDS	473162	473449	.	+	0	ID=cds425;Parent=gene479;Dbxref=Genbank:YP_402183.1,GeneID:3796086;Name=YP_402183.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_402183.1;transl_table=11
NC_007606.1	RefSeq	region	473222	473884	.	+	.	ID=id68;Note=fragment;gbkey=mobile_element;gene=insA
NC_007606.1	RefSeq	gene	473945	475327	.	+	.	ID=gene480;Dbxref=GeneID:3796087;Name=SDY_0488;Note=SDY0488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0488
NC_007606.1	RefSeq	CDS	473945	475327	.	+	0	ID=cds426;Parent=gene480;Dbxref=Genbank:YP_402184.1,GeneID:3796087;Name=YP_402184.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402184.1;transl_table=11
NC_007606.1	RefSeq	gene	475429	476805	.	+	.	ID=gene481;Dbxref=GeneID:3796088;Name=pheP;Note=SDY0489;gbkey=Gene;gene=pheP;gene_biotype=protein_coding;locus_tag=SDY_0489
NC_007606.1	RefSeq	CDS	475429	476805	.	+	0	ID=cds427;Parent=gene481;Dbxref=Genbank:YP_402185.1,GeneID:3796088;Name=YP_402185.1;Note=Code: E%3B COG: COG1113;gbkey=CDS;gene=pheP;product=phenylalanine transporter;protein_id=YP_402185.1;transl_table=11
NC_007606.1	RefSeq	gene	476873	478120	.	-	.	ID=gene482;Dbxref=GeneID:3796089;Name=ybdG;Note=SDY0490;gbkey=Gene;gene=ybdG;gene_biotype=protein_coding;locus_tag=SDY_0490
NC_007606.1	RefSeq	CDS	476873	478120	.	-	0	ID=cds428;Parent=gene482;Dbxref=Genbank:YP_402186.1,GeneID:3796089;Name=YP_402186.1;Note=Code: M%3B COG: COG0668;gbkey=CDS;gene=ybdG;product=transporter;protein_id=YP_402186.1;transl_table=11
NC_007606.1	RefSeq	gene	478228	478881	.	-	.	ID=gene483;Dbxref=GeneID:3796090;Name=nfnB;Note=SDY0491;gbkey=Gene;gene=nfnB;gene_biotype=protein_coding;locus_tag=SDY_0491
NC_007606.1	RefSeq	CDS	478228	478881	.	-	0	ID=cds429;Parent=gene483;Dbxref=Genbank:YP_402187.1,GeneID:3796090;Name=YP_402187.1;Note=''catalyzes the reduction of nitroaromatic compounds such as nitrofurazone%2C quinones and the anti-tumor agent CB1954%3B NAD(P)H-dependent%3B oxygen insensitive'';gbkey=CDS;gene=nfnB;product=dihydropteridine reductase;protein_id=YP_402187.1;transl_table=11
NC_007606.1	RefSeq	gene	478975	479343	.	-	.	ID=gene484;Dbxref=GeneID:3796091;Name=ybdF;Note=SDY0492;gbkey=Gene;gene=ybdF;gene_biotype=protein_coding;locus_tag=SDY_0492
NC_007606.1	RefSeq	CDS	478975	479343	.	-	0	ID=cds430;Parent=gene484;Dbxref=Genbank:YP_402188.1,GeneID:3796091;Name=YP_402188.1;Note=Code: S%3B COG: COG2315;gbkey=CDS;gene=ybdF;product=hypothetical protein;protein_id=YP_402188.1;transl_table=11
NC_007606.1	RefSeq	gene	479408	479656	.	-	.	ID=gene485;Dbxref=GeneID:3796092;Name=ybdJ;Note=SDY0493;gbkey=Gene;gene=ybdJ;gene_biotype=protein_coding;locus_tag=SDY_0493
NC_007606.1	RefSeq	CDS	479408	479656	.	-	0	ID=cds431;Parent=gene485;Dbxref=Genbank:YP_402189.1,GeneID:3796092;Name=YP_402189.1;gbkey=CDS;gene=ybdJ;product=hypothetical protein;protein_id=YP_402189.1;transl_table=11
NC_007606.1	RefSeq	gene	479722	480840	.	-	.	ID=gene486;Dbxref=GeneID:3796093;Name=ybdK;Note=SDY0494;gbkey=Gene;gene=ybdK;gene_biotype=protein_coding;locus_tag=SDY_0494
NC_007606.1	RefSeq	CDS	479722	480840	.	-	0	ID=cds432;Parent=gene486;Dbxref=Genbank:YP_402190.1,GeneID:3796093;Name=YP_402190.1;Note=ATP-dependent%3B carboxylate-amine ligase with weak glutamate--cysteine ligase activity;gbkey=CDS;gene=ybdK;product=carboxylate-amine ligase;protein_id=YP_402190.1;transl_table=11
NC_007606.1	RefSeq	gene	481279	481431	.	+	.	ID=gene487;Dbxref=GeneID:18262962;Name=SDY_0495a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0495a
NC_007606.1	RefSeq	CDS	481279	481431	.	+	0	ID=cds433;Parent=gene487;Dbxref=Genbank:YP_009000648.1,GeneID:18262962;Name=YP_009000648.1;gbkey=CDS;product=toxic polypeptide;protein_id=YP_009000648.1;transl_table=11
NC_007606.1	RefSeq	region	481753	483083	.	-	.	ID=id69;gbkey=mobile_element
NC_007606.1	RefSeq	gene	481764	482669	.	-	.	ID=gene488;Dbxref=GeneID:3796094;Name=SDY_0495;Note=SDY0495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0495
NC_007606.1	RefSeq	CDS	481764	482669	.	-	0	ID=cds434;Parent=gene488;Dbxref=Genbank:YP_402191.2,GeneID:3796094;Name=YP_402191.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_402191.2;transl_table=11
NC_007606.1	RefSeq	gene	482627	482992	.	-	.	ID=gene489;Dbxref=GeneID:3796095;Name=SDY_0496;Note=SDY0496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0496
NC_007606.1	RefSeq	CDS	482627	482992	.	-	0	ID=cds435;Parent=gene489;Dbxref=Genbank:YP_402192.1,GeneID:3796095;Name=YP_402192.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_402192.1;transl_table=11
NC_007606.1	RefSeq	gene	483003	483995	.	+	.	ID=gene490;Dbxref=GeneID:3796096;Name=SDY_0497;Note=SDY0497;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0497
NC_007606.1	RefSeq	CDS	483003	483995	.	+	0	ID=cds436;Parent=gene490;Dbxref=Genbank:YP_402193.1,GeneID:3796096;Name=YP_402193.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402193.1;transl_table=11
NC_007606.1	RefSeq	gene	484134	484817	.	+	.	ID=gene491;Dbxref=GeneID:3796097;Name=SDY_0498;Note=SDY0498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0498
NC_007606.1	RefSeq	CDS	484134	484817	.	+	0	ID=cds437;Parent=gene491;Dbxref=Genbank:YP_402194.1,GeneID:3796097;Name=YP_402194.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402194.1;transl_table=11
NC_007606.1	RefSeq	region	484813	485580	.	+	.	ID=id70;gbkey=mobile_element
NC_007606.1	RefSeq	gene	484868	485143	.	+	.	ID=gene492;Dbxref=GeneID:3796098;Name=insA;Note=SDY0499;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0499
NC_007606.1	RefSeq	CDS	484868	485143	.	+	0	ID=cds438;Parent=gene492;Dbxref=Genbank:YP_402195.1,GeneID:3796098;Name=YP_402195.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402195.1;transl_table=11
NC_007606.1	RefSeq	gene	485188	485565	.	+	.	ID=gene493;Dbxref=GeneID:3797427;Name=insB;Note=SDY0500;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0500
NC_007606.1	RefSeq	CDS	485188	485565	.	+	0	ID=cds439;Parent=gene493;Dbxref=Genbank:YP_402196.1,GeneID:3797427;Name=YP_402196.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402196.1;transl_table=11
NC_007606.1	RefSeq	gene	485847	486854	.	+	.	ID=gene494;Dbxref=GeneID:3797428;Name=hemB;Note=SDY0501;gbkey=Gene;gene=hemB;gene_biotype=protein_coding;locus_tag=SDY_0501
NC_007606.1	RefSeq	CDS	485847	486854	.	+	0	ID=cds440;Parent=gene494;Dbxref=Genbank:YP_402197.1,GeneID:3797428;Name=YP_402197.1;Note=catalyzes the formation of porphobilinogen from 5-aminolevulinate;gbkey=CDS;gene=hemB;product=delta-aminolevulinic acid dehydratase;protein_id=YP_402197.1;transl_table=11
NC_007606.1	RefSeq	gene	486961	487812	.	-	.	ID=gene495;Dbxref=GeneID:3797429;Name=tauD;Note=SDY0502;gbkey=Gene;gene=tauD;gene_biotype=protein_coding;locus_tag=SDY_0502
NC_007606.1	RefSeq	CDS	486961	487812	.	-	0	ID=cds441;Parent=gene495;Dbxref=Genbank:YP_402198.1,GeneID:3797429;Name=YP_402198.1;Note=catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide%3B non-heme iron oxidase%3B allows the use of taurine as an alternative sulfur source%3B forms homodimers;gbkey=CDS;gene=tauD;product=taurine dioxygenase;protein_id=YP_402198.1;transl_table=11
NC_007606.1	RefSeq	gene	487809	488636	.	-	.	ID=gene496;Dbxref=GeneID:3797430;Name=tauC;Note=SDY0503;gbkey=Gene;gene=tauC;gene_biotype=protein_coding;locus_tag=SDY_0503
NC_007606.1	RefSeq	CDS	487809	488636	.	-	0	ID=cds442;Parent=gene496;Dbxref=Genbank:YP_402199.1,GeneID:3797430;Name=YP_402199.1;Note=Code: P%3B COG: COG0600;gbkey=CDS;gene=tauC;product=taurine transporter subunit;protein_id=YP_402199.1;transl_table=11
NC_007606.1	RefSeq	gene	488633	489400	.	-	.	ID=gene497;Dbxref=GeneID:3797431;Name=tauB;Note=SDY0504;gbkey=Gene;gene=tauB;gene_biotype=protein_coding;locus_tag=SDY_0504
NC_007606.1	RefSeq	CDS	488633	489400	.	-	0	ID=cds443;Parent=gene497;Dbxref=Genbank:YP_402200.1,GeneID:3797431;Name=YP_402200.1;Note=Part of the ABC transporter complex tauABC involved in taurine import;gbkey=CDS;gene=tauB;product=taurine ABC transporter ATP-binding protein;protein_id=YP_402200.1;transl_table=11
NC_007606.1	RefSeq	gene	489413	490375	.	-	.	ID=gene498;Dbxref=GeneID:3797432;Name=tauA;Note=SDY0505;gbkey=Gene;gene=tauA;gene_biotype=protein_coding;locus_tag=SDY_0505
NC_007606.1	RefSeq	CDS	489413	490375	.	-	0	ID=cds444;Parent=gene498;Dbxref=Genbank:YP_402201.1,GeneID:3797432;Name=YP_402201.1;Note=with TauB and TauC is responsible for taurine uptake.;gbkey=CDS;gene=tauA;product=taurine transporter substrate binding subunit;protein_id=YP_402201.1;transl_table=11
NC_007606.1	RefSeq	gene	490678	491307	.	+	.	ID=gene499;Dbxref=GeneID:3797433;Name=SDY_0506;Note=SDY0506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0506
NC_007606.1	RefSeq	CDS	490678	491307	.	+	0	ID=cds445;Parent=gene499;Dbxref=Genbank:YP_402202.1,GeneID:3797433;Name=YP_402202.1;Note=Code: TK%3B COG: COG2197;gbkey=CDS;product=response regulator;protein_id=YP_402202.1;transl_table=11
NC_007606.1	RefSeq	gene	491307	492508	.	+	.	ID=gene500;Dbxref=GeneID:3797434;Name=SDY_0507;Note=SDY0507;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0507;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	492438	493682	.	-	.	ID=id71;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	493226	493591	.	-	.	ID=gene501;Dbxref=GeneID:3797437;Name=SDY_0510;Note=SDY0510;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0510
NC_007606.1	RefSeq	CDS	493226	493591	.	-	0	ID=cds446;Parent=gene501;Dbxref=Genbank:YP_402206.1,GeneID:3797437;Name=YP_402206.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_402206.1;transl_table=11
NC_007606.1	RefSeq	gene	493717	493869	.	+	.	ID=gene502;Dbxref=GeneID:18262963;Name=SDY_0510a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0510a
NC_007606.1	RefSeq	CDS	493717	493869	.	+	0	ID=cds447;Parent=gene502;Dbxref=Genbank:YP_009000649.1,GeneID:18262963;Name=YP_009000649.1;gbkey=CDS;product=toxic polypeptide;protein_id=YP_009000649.1;transl_table=11
NC_007606.1	RefSeq	gene	493991	494620	.	-	.	ID=gene503;Dbxref=GeneID:3797438;Name=entD;Note=SDY0511;gbkey=Gene;gene=entD;gene_biotype=protein_coding;locus_tag=SDY_0511
NC_007606.1	RefSeq	CDS	493991	494620	.	-	0	ID=cds448;Parent=gene503;Dbxref=Genbank:YP_402207.1,GeneID:3797438;Name=YP_402207.1;Note=Code: Q%3B COG: COG2977;gbkey=CDS;gene=entD;product=phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex;protein_id=YP_402207.1;transl_table=11
NC_007606.1	RefSeq	gene	494786	497026	.	-	.	ID=gene504;Dbxref=GeneID:3797439;Name=fepA;Note=SDY0512;gbkey=Gene;gene=fepA;gene_biotype=protein_coding;locus_tag=SDY_0512
NC_007606.1	RefSeq	CDS	494786	497026	.	-	0	ID=cds449;Parent=gene504;Dbxref=Genbank:YP_402208.1,GeneID:3797439;Name=YP_402208.1;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space;gbkey=CDS;gene=fepA;product=outer membrane receptor FepA;protein_id=YP_402208.1;transl_table=11
NC_007606.1	RefSeq	gene	497347	498471	.	+	.	ID=gene505;Dbxref=GeneID:3797440;Name=fes;Note=SDY0513;gbkey=Gene;gene=fes;gene_biotype=protein_coding;locus_tag=SDY_0513
NC_007606.1	RefSeq	CDS	497347	498471	.	+	0	ID=cds450;Parent=gene505;Dbxref=Genbank:YP_402209.1,GeneID:3797440;Name=YP_402209.1;Note=Code: P%3B COG: COG2382;gbkey=CDS;gene=fes;product=enterobactin/ferric enterobactin esterase;protein_id=YP_402209.1;transl_table=11
NC_007606.1	RefSeq	gene	498474	498692	.	+	.	ID=gene506;Dbxref=GeneID:3797441;Name=ybdZ;Note=SDY0514;gbkey=Gene;gene=ybdZ;gene_biotype=protein_coding;locus_tag=SDY_0514
NC_007606.1	RefSeq	CDS	498474	498692	.	+	0	ID=cds451;Parent=gene506;Dbxref=Genbank:YP_402210.1,GeneID:3797441;Name=YP_402210.1;Note=Code: S%3B COG: COG3251;gbkey=CDS;gene=ybdZ;product=hypothetical protein;protein_id=YP_402210.1;transl_table=11
NC_007606.1	RefSeq	gene	498689	502570	.	+	.	ID=gene507;Dbxref=GeneID:3797442;Name=entF;Note=SDY0515;gbkey=Gene;gene=entF;gene_biotype=protein_coding;locus_tag=SDY_0515
NC_007606.1	RefSeq	CDS	498689	502570	.	+	0	ID=cds452;Parent=gene507;Dbxref=Genbank:YP_402211.1,GeneID:3797442;Name=YP_402211.1;Note=''with EntB%2C EntD%2C and EntE forms the multienzyme complex enterobactin synthase%3B EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin'';gbkey=CDS;gene=entF;product=enterobactin synthase subunit F;protein_id=YP_402211.1;transl_table=11
NC_007606.1	RefSeq	region	502775	503542	.	-	.	ID=id72;gbkey=mobile_element
NC_007606.1	RefSeq	gene	502790	503167	.	-	.	ID=gene508;Dbxref=GeneID:3797443;Name=insB;Note=SDY0516;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0516
NC_007606.1	RefSeq	CDS	502790	503167	.	-	0	ID=cds453;Parent=gene508;Dbxref=Genbank:YP_009000650.1,GeneID:3797443;Name=YP_009000650.1;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_009000650.1;transl_table=11
NC_007606.1	RefSeq	gene	503212	503487	.	-	.	ID=gene509;Dbxref=GeneID:3797444;Name=insA;Note=SDY0517;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0517
NC_007606.1	RefSeq	CDS	503212	503487	.	-	0	ID=cds454;Parent=gene509;Dbxref=Genbank:YP_402213.1,GeneID:3797444;Name=YP_402213.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402213.1;transl_table=11
NC_007606.1	RefSeq	gene	503562	504695	.	+	.	ID=gene510;Dbxref=GeneID:3797445;Name=fepE;Note=SDY0518;gbkey=Gene;gene=fepE;gene_biotype=protein_coding;locus_tag=SDY_0518
NC_007606.1	RefSeq	CDS	503562	504695	.	+	0	ID=cds455;Parent=gene510;Dbxref=Genbank:YP_402214.1,GeneID:3797445;Name=YP_402214.1;Note=part of the ferric enterobactin transport system%3B necessary for enetrobactin uptake;gbkey=CDS;gene=fepE;product=ferric enterobactin transport protein FepE;protein_id=YP_402214.1;transl_table=11
NC_007606.1	RefSeq	gene	504692	505507	.	-	.	ID=gene511;Dbxref=GeneID:3799884;Name=fepC;Note=SDY0519;gbkey=Gene;gene=fepC;gene_biotype=protein_coding;locus_tag=SDY_0519
NC_007606.1	RefSeq	CDS	504692	505507	.	-	0	ID=cds456;Parent=gene511;Dbxref=Genbank:YP_402215.1,GeneID:3799884;Name=YP_402215.1;Note=with FepBDE is involved in the transport of ferric enterobactin;gbkey=CDS;gene=fepC;product=iron-enterobactin ABC transporter ATP-binding protein;protein_id=YP_402215.1;transl_table=11
NC_007606.1	RefSeq	gene	505504	506496	.	-	.	ID=gene512;Dbxref=GeneID:3799885;Name=fepG;Note=SDY0520;gbkey=Gene;gene=fepG;gene_biotype=protein_coding;locus_tag=SDY_0520
NC_007606.1	RefSeq	CDS	505504	506496	.	-	0	ID=cds457;Parent=gene512;Dbxref=Genbank:YP_402216.1,GeneID:3799885;Name=YP_402216.1;Note=with FepBCD is involved in the transport of ferric enterobactin;gbkey=CDS;gene=fepG;product=iron-enterobactin ABC transporter permease;protein_id=YP_402216.1;transl_table=11
NC_007606.1	RefSeq	gene	506493	507497	.	-	.	ID=gene513;Dbxref=GeneID:3799886;Name=fepD;Note=SDY0521;gbkey=Gene;gene=fepD;gene_biotype=protein_coding;locus_tag=SDY_0521
NC_007606.1	RefSeq	CDS	506493	507497	.	-	0	ID=cds458;Parent=gene513;Dbxref=Genbank:YP_402217.1,GeneID:3799886;Name=YP_402217.1;Note=with FepBCG is involved in the transport of ferric enterobactin;gbkey=CDS;gene=fepD;product=iron-enterobactin ABC transporter permease;protein_id=YP_402217.1;transl_table=11
NC_007606.1	RefSeq	gene	507608	508858	.	+	.	ID=gene514;Dbxref=GeneID:3799887;Name=ybdA;Note=SDY0522;gbkey=Gene;gene=ybdA;gene_biotype=protein_coding;locus_tag=SDY_0522
NC_007606.1	RefSeq	CDS	507608	508858	.	+	0	ID=cds459;Parent=gene514;Dbxref=Genbank:YP_402218.1,GeneID:3799887;Name=YP_402218.1;Note=protein p43%3B inner membrane protein that exports enterobactin to the periplasmic space%3B member of the major facilitator superfamily (MFS) of transporters;gbkey=CDS;gene=ybdA;product=enterobactin exporter EntS;protein_id=YP_402218.1;transl_table=11
NC_007606.1	RefSeq	gene	508939	509904	.	-	.	ID=gene515;Dbxref=GeneID:3799888;Name=fepB;Note=SDY0523;gbkey=Gene;gene=fepB;gene_biotype=protein_coding;locus_tag=SDY_0523
NC_007606.1	RefSeq	CDS	508939	509904	.	-	0	ID=cds460;Parent=gene515;Dbxref=Genbank:YP_402219.1,GeneID:3799888;Name=YP_402219.1;Note=with FepCDG is involved in the transport of ferric enterobactin;gbkey=CDS;gene=fepB;product=iron-enterobactin ABC transporter substrate-binding protein;protein_id=YP_402219.1;transl_table=11
NC_007606.1	RefSeq	gene	510093	511268	.	+	.	ID=gene516;Dbxref=GeneID:3799889;Name=entC;Note=SDY0524;gbkey=Gene;gene=entC;gene_biotype=protein_coding;locus_tag=SDY_0524
NC_007606.1	RefSeq	CDS	510093	511268	.	+	0	ID=cds461;Parent=gene516;Dbxref=Genbank:YP_402220.1,GeneID:3799889;Name=YP_402220.1;Note=Code: HQ%3B COG: COG1169;gbkey=CDS;gene=entC;product=isochorismate hydroxymutase;protein_id=YP_402220.1;transl_table=11
NC_007606.1	RefSeq	gene	511278	512888	.	+	.	ID=gene517;Dbxref=GeneID:3799890;Name=entE;Note=SDY0525;gbkey=Gene;gene=entE;gene_biotype=protein_coding;locus_tag=SDY_0525
NC_007606.1	RefSeq	CDS	511278	512888	.	+	0	ID=cds462;Parent=gene517;Dbxref=Genbank:YP_402221.1,GeneID:3799890;Name=YP_402221.1;Note=''bifunctional 2%2C3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase%3B activates the carboxylate group of 2%2C3-dihydroxy-benzoate forming (2%2C3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2%2C3-dihydroxy-benzoate adenylate'';gbkey=CDS;gene=entE;product=enterobactin synthase subunit E;protein_id=YP_402221.1;transl_table=11
NC_007606.1	RefSeq	gene	512902	513759	.	+	.	ID=gene518;Dbxref=GeneID:3799891;Name=entB;Note=SDY0526;gbkey=Gene;gene=entB;gene_biotype=protein_coding;locus_tag=SDY_0526
NC_007606.1	RefSeq	CDS	512902	513759	.	+	0	ID=cds463;Parent=gene518;Dbxref=Genbank:YP_402222.1,GeneID:3799891;Name=YP_402222.1;Note=Code: Q%3B COG: COG1535;gbkey=CDS;gene=entB;product=2%2C3-dihydro-2%2C3-dihydroxybenzoate synthetase;protein_id=YP_402222.1;transl_table=11
NC_007606.1	RefSeq	gene	513759	514505	.	+	.	ID=gene519;Dbxref=GeneID:3799892;Name=entA;Note=SDY0527;gbkey=Gene;gene=entA;gene_biotype=protein_coding;locus_tag=SDY_0527
NC_007606.1	RefSeq	CDS	513759	514505	.	+	0	ID=cds464;Parent=gene519;Dbxref=Genbank:YP_402223.1,GeneID:3799892;Name=YP_402223.1;Note=''catalyzes the formation of 2%2C3-dihydroxybenzoate from 2%2C3-dihydro-2%2C3-dihydroxybenzoate%3B involved in the biosynthesis of siderophores%2C enterobactin%2C bacillibactin or vibriobactin'';gbkey=CDS;gene=entA;product=2%2C3-dihydroxybenzoate-2%2C3-dehydrogenase;protein_id=YP_402223.1;transl_table=11
NC_007606.1	RefSeq	gene	514508	514921	.	+	.	ID=gene520;Dbxref=GeneID:3799893;Name=ybdB;Note=SDY0528;gbkey=Gene;gene=ybdB;gene_biotype=protein_coding;locus_tag=SDY_0528
NC_007606.1	RefSeq	CDS	514508	514921	.	+	0	ID=cds465;Parent=gene520;Dbxref=Genbank:YP_402224.1,GeneID:3799893;Name=YP_402224.1;Note=Code: Q%3B COG: COG2050;gbkey=CDS;gene=ybdB;product=hypothetical protein;protein_id=YP_402224.1;transl_table=11
NC_007606.1	RefSeq	gene	515102	517207	.	+	.	ID=gene521;Dbxref=GeneID:3799894;Name=cstA;Note=SDY0529%3B contains in-frame stop codon%3B original product: carbon starvation protein;gbkey=Gene;gene=cstA;gene_biotype=pseudogene;locus_tag=SDY_0529;pseudo=true
NC_007606.1	RefSeq	gene	517389	517586	.	+	.	ID=gene522;Dbxref=GeneID:3799895;Name=ybdD;Note=SDY0530;gbkey=Gene;gene=ybdD;gene_biotype=protein_coding;locus_tag=SDY_0530
NC_007606.1	RefSeq	CDS	517389	517586	.	+	0	ID=cds466;Parent=gene522;Dbxref=Genbank:YP_402225.1,GeneID:3799895;Name=YP_402225.1;Note=Code: S%3B COG: COG2879;gbkey=CDS;gene=ybdD;product=hypothetical protein;protein_id=YP_402225.1;transl_table=11
NC_007606.1	RefSeq	gene	517596	518684	.	-	.	ID=gene523;Dbxref=GeneID:3799896;Name=ybdH;Note=SDY0531;gbkey=Gene;gene=ybdH;gene_biotype=protein_coding;locus_tag=SDY_0531
NC_007606.1	RefSeq	CDS	517596	518684	.	-	0	ID=cds467;Parent=gene523;Dbxref=Genbank:YP_402226.1,GeneID:3799896;Name=YP_402226.1;Note=member of the iron-containing alcohol dehydrogenase%3B unknown function;gbkey=CDS;gene=ybdH;product=hypothetical protein;protein_id=YP_402226.1;transl_table=11
NC_007606.1	RefSeq	gene	518793	519953	.	+	.	ID=gene524;Dbxref=GeneID:3799897;Name=ybdL;Note=SDY0532;gbkey=Gene;gene=ybdL;gene_biotype=pseudogene;locus_tag=SDY_0532;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	519954	520571	.	-	.	ID=gene525;Dbxref=GeneID:3799898;Name=ybdM;Note=SDY0533;gbkey=Gene;gene=ybdM;gene_biotype=pseudogene;locus_tag=SDY_0533;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	520556	521143	.	-	.	ID=gene526;Dbxref=GeneID:3799899;Name=SDY_0534;Note=SDY0534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0534;pseudogene=unknown
NC_007606.1	RefSeq	CDS	520556	521143	.	-	0	ID=cds468;Parent=gene526;Dbxref=Genbank:YP_402229.1,GeneID:3799899;Name=YP_402229.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402229.1;transl_table=11
NC_007606.1	RefSeq	region	521145	522408	.	+	.	ID=id73;gbkey=mobile_element
NC_007606.1	RefSeq	gene	521209	521511	.	+	.	ID=gene527;Dbxref=GeneID:3799900;Name=SDY_0535;Note=SDY0535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0535
NC_007606.1	RefSeq	CDS	521209	521511	.	+	0	ID=cds469;Parent=gene527;Dbxref=Genbank:YP_402230.1,GeneID:3799900;Name=YP_402230.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402230.1;transl_table=11
NC_007606.1	RefSeq	gene	521652	522365	.	+	.	ID=gene528;Dbxref=GeneID:3799901;Name=SDY_0536;Note=SDY0536;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0536
NC_007606.1	RefSeq	CDS	521652	522365	.	+	0	ID=cds470;Parent=gene528;Dbxref=Genbank:YP_402231.1,GeneID:3799901;Name=YP_402231.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402231.1;transl_table=11
NC_007606.1	RefSeq	gene	522390	523043	.	-	.	ID=gene529;Dbxref=GeneID:3799902;Name=ybdN;Note=SDY0537;gbkey=Gene;gene=ybdN;gene_biotype=protein_coding;locus_tag=SDY_0537
NC_007606.1	RefSeq	CDS	522390	523043	.	-	0	ID=cds471;Parent=gene529;Dbxref=Genbank:YP_402232.1,GeneID:3799902;Name=YP_402232.1;Note=Code: R%3B COG: COG3969;gbkey=CDS;gene=ybdN;product=hypothetical protein;protein_id=YP_402232.1;transl_table=11
NC_007606.1	RefSeq	region	523459	524225	.	+	.	ID=id74;gbkey=mobile_element
NC_007606.1	RefSeq	gene	523516	523788	.	+	.	ID=gene530;Dbxref=GeneID:18262964;Name=SDY_0537a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0537a
NC_007606.1	RefSeq	CDS	523516	523788	.	+	0	ID=cds472;Parent=gene530;Dbxref=Genbank:YP_009000651.1,GeneID:18262964;Name=YP_009000651.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000651.1;transl_table=11
NC_007606.1	RefSeq	gene	523815	524210	.	+	.	ID=gene531;Dbxref=GeneID:3799903;Name=SDY_0538;Note=SDY0538;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0538
NC_007606.1	RefSeq	CDS	523815	524210	.	+	0	ID=cds473;Parent=gene531;Dbxref=Genbank:YP_402233.1,GeneID:3799903;Name=YP_402233.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402233.1;transl_table=11
NC_007606.1	RefSeq	gene	524464	525270	.	-	.	ID=gene532;Dbxref=GeneID:3797334;Name=dsbG;Note=SDY0539%3B contains in-frame stop codon%3B original product: thiol:disulfide interchange protein;gbkey=Gene;gene=dsbG;gene_biotype=pseudogene;locus_tag=SDY_0539;pseudo=true
NC_007606.1	RefSeq	gene	525582	526145	.	+	.	ID=gene533;Dbxref=GeneID:3797335;Name=ahpC;Note=SDY0540;gbkey=Gene;gene=ahpC;gene_biotype=protein_coding;locus_tag=SDY_0540
NC_007606.1	RefSeq	CDS	525582	526145	.	+	0	ID=cds474;Parent=gene533;Dbxref=Genbank:YP_402234.1,GeneID:3797335;Name=YP_402234.1;Note=with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols%3B AhpC reduced the hydroperoxide substrate;gbkey=CDS;gene=ahpC;product=alkyl hydroperoxide reductase;protein_id=YP_402234.1;transl_table=11
NC_007606.1	RefSeq	gene	526244	527839	.	+	.	ID=gene534;Dbxref=GeneID:3797336;Name=ahpF;Note=SDY0541;gbkey=Gene;gene=ahpF;gene_biotype=protein_coding;locus_tag=SDY_0541
NC_007606.1	RefSeq	CDS	526244	527839	.	+	0	ID=cds475;Parent=gene534;Dbxref=Genbank:YP_402235.1,GeneID:3797336;Name=YP_402235.1;Note=Code: O%3B COG: COG3634;gbkey=CDS;gene=ahpF;product=alkyl hydroperoxide reductase;protein_id=YP_402235.1;transl_table=11
NC_007606.1	RefSeq	gene	527960	528388	.	-	.	ID=gene535;Dbxref=GeneID:3797337;Name=ybdQ;Note=SDY0542;gbkey=Gene;gene=ybdQ;gene_biotype=protein_coding;locus_tag=SDY_0542
NC_007606.1	RefSeq	CDS	527960	528388	.	-	0	ID=cds476;Parent=gene535;Dbxref=Genbank:YP_402236.1,GeneID:3797337;Name=YP_402236.1;Note=Code: T%3B COG: COG0589;gbkey=CDS;gene=ybdQ;product=hypothetical protein;protein_id=YP_402236.1;transl_table=11
NC_007606.1	RefSeq	region	528546	529313	.	+	.	ID=id75;gbkey=mobile_element
NC_007606.1	RefSeq	gene	528601	528876	.	+	.	ID=gene536;Dbxref=GeneID:3797338;Name=insA;Note=SDY0543;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0543
NC_007606.1	RefSeq	CDS	528601	528876	.	+	0	ID=cds477;Parent=gene536;Dbxref=Genbank:YP_402237.1,GeneID:3797338;Name=YP_402237.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402237.1;transl_table=11
NC_007606.1	RefSeq	gene	528921	529298	.	+	.	ID=gene537;Dbxref=GeneID:3797339;Name=insB;Note=SDY0544;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0544
NC_007606.1	RefSeq	CDS	528921	529298	.	+	0	ID=cds478;Parent=gene537;Dbxref=Genbank:YP_402238.1,GeneID:3797339;Name=YP_402238.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402238.1;transl_table=11
NC_007606.1	RefSeq	gene	529510	529782	.	+	.	ID=gene538;Dbxref=GeneID:3797340;Name=pagP;Note=SDY0545;gbkey=Gene;gene=pagP;gene_biotype=protein_coding;locus_tag=SDY_0545
NC_007606.1	RefSeq	CDS	529510	529782	.	+	0	ID=cds479;Parent=gene538;Dbxref=Genbank:YP_402239.1,GeneID:3797340;Name=YP_402239.1;Note=catalyzes the transfer of palmitate to lipid A;gbkey=CDS;gene=pagP;product=palmitoyl transferase;protein_id=YP_402239.1;transl_table=11
NC_007606.1	RefSeq	gene	529957	530166	.	+	.	ID=gene539;Dbxref=GeneID:3797341;Name=cspE;Note=SDY0546;gbkey=Gene;gene=cspE;gene_biotype=protein_coding;locus_tag=SDY_0546
NC_007606.1	RefSeq	CDS	529957	530166	.	+	0	ID=cds480;Parent=gene539;Dbxref=Genbank:YP_402240.1,GeneID:3797341;Name=YP_402240.1;Note=member of the CspA family%3B constitutively expressed RNA/ssDNA-binding protein%3B functions in helping cells adapt to low temperature%3B aids nucleic acid melting%3B participates in gene regulation%3B can act as a transcription antiterminator;gbkey=CDS;gene=cspE;product=cold shock protein CspE;protein_id=YP_402240.1;transl_table=11
NC_007606.1	RefSeq	gene	530220	530603	.	-	.	ID=gene540;Dbxref=GeneID:3797342;Name=crcB;Note=SDY0547;gbkey=Gene;gene=crcB;gene_biotype=protein_coding;locus_tag=SDY_0547
NC_007606.1	RefSeq	CDS	530220	530603	.	-	0	ID=cds481;Parent=gene540;Dbxref=Genbank:YP_402241.1,GeneID:3797342;Name=YP_402241.1;Note=Code: D%3B COG: COG0239;gbkey=CDS;gene=crcB;product=hypothetical protein;protein_id=YP_402241.1;transl_table=11
NC_007606.1	RefSeq	gene	531613	531816	.	+	.	ID=gene541;Dbxref=GeneID:3797344;Name=tatE;Note=SDY0549;gbkey=Gene;gene=tatE;gene_biotype=protein_coding;locus_tag=SDY_0549
NC_007606.1	RefSeq	CDS	531613	531816	.	+	0	ID=cds482;Parent=gene541;Dbxref=Genbank:YP_402243.1,GeneID:3797344;Name=YP_402243.1;Note=TatE%3B similar to TatA and found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;gbkey=CDS;gene=tatE;product=twin arginine translocase E;protein_id=YP_402243.1;transl_table=11
NC_007606.1	RefSeq	gene	531917	532882	.	-	.	ID=gene542;Dbxref=GeneID:3797345;Name=lipA;Note=SDY0550;gbkey=Gene;gene=lipA;gene_biotype=protein_coding;locus_tag=SDY_0550
NC_007606.1	RefSeq	CDS	531917	532882	.	-	0	ID=cds483;Parent=gene542;Dbxref=Genbank:YP_402244.1,GeneID:3797345;Name=YP_402244.1;Note=catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group;gbkey=CDS;gene=lipA;product=lipoyl synthase;protein_id=YP_402244.1;transl_table=11
NC_007606.1	RefSeq	gene	533091	534026	.	-	.	ID=gene543;Dbxref=GeneID:3797346;Name=ybeF;Note=SDY0551;gbkey=Gene;gene=ybeF;gene_biotype=protein_coding;locus_tag=SDY_0551
NC_007606.1	RefSeq	CDS	533091	534026	.	-	0	ID=cds484;Parent=gene543;Dbxref=Genbank:YP_402245.1,GeneID:3797346;Name=YP_402245.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=ybeF;product=DNA-binding transcriptional regulator;protein_id=YP_402245.1;transl_table=11
NC_007606.1	RefSeq	gene	534439	535080	.	-	.	ID=gene544;Dbxref=GeneID:3797347;Name=lipB;Note=SDY0552;gbkey=Gene;gene=lipB;gene_biotype=protein_coding;locus_tag=SDY_0552
NC_007606.1	RefSeq	CDS	534439	535080	.	-	0	ID=cds485;Parent=gene544;Dbxref=Genbank:YP_402246.2,GeneID:3797347;Name=YP_402246.2;Note=lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferse%3B lipoate-protein ligase B%3B transfers lipoate to apolipoproteins%3B involved in lipoate metabolism;gbkey=CDS;gene=lipB;product=lipoyltransferase;protein_id=YP_402246.2;transl_table=11
NC_007606.1	RefSeq	gene	535180	535443	.	-	.	ID=gene545;Dbxref=GeneID:3797348;Name=ybeD;Note=SDY0553;gbkey=Gene;gene=ybeD;gene_biotype=protein_coding;locus_tag=SDY_0553
NC_007606.1	RefSeq	CDS	535180	535443	.	-	0	ID=cds486;Parent=gene545;Dbxref=Genbank:YP_402247.1,GeneID:3797348;Name=YP_402247.1;Note=Code: S%3B COG: COG2921;gbkey=CDS;gene=ybeD;product=hypothetical protein;protein_id=YP_402247.1;transl_table=11
NC_007606.1	RefSeq	gene	535553	536764	.	-	.	ID=gene546;Dbxref=GeneID:3797349;Name=dacA;Note=SDY0554;gbkey=Gene;gene=dacA;gene_biotype=protein_coding;locus_tag=SDY_0554
NC_007606.1	RefSeq	CDS	535553	536764	.	-	0	ID=cds487;Parent=gene546;Dbxref=Genbank:YP_402248.1,GeneID:3797349;Name=YP_402248.1;Note=penicillin-binding protein 5%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors;gbkey=CDS;gene=dacA;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_402248.1;transl_table=11
NC_007606.1	RefSeq	gene	536904	537992	.	-	.	ID=gene547;Dbxref=GeneID:3797350;Name=rlpA;Note=SDY0555;gbkey=Gene;gene=rlpA;gene_biotype=protein_coding;locus_tag=SDY_0555
NC_007606.1	RefSeq	CDS	536904	537992	.	-	0	ID=cds488;Parent=gene547;Dbxref=Genbank:YP_402249.1,GeneID:3797350;Name=YP_402249.1;Note=Code: M%3B COG: COG0797;gbkey=CDS;gene=rlpA;product=rare lipoprotein A;protein_id=YP_402249.1;transl_table=11
NC_007606.1	RefSeq	gene	538003	539115	.	-	.	ID=gene548;Dbxref=GeneID:3797351;Name=mrdB;Note=SDY0556;gbkey=Gene;gene=mrdB;gene_biotype=protein_coding;locus_tag=SDY_0556
NC_007606.1	RefSeq	CDS	538003	539115	.	-	0	ID=cds489;Parent=gene548;Dbxref=Genbank:YP_402250.1,GeneID:3797351;Name=YP_402250.1;Note=Code: D%3B COG: COG0772;gbkey=CDS;gene=mrdB;product=cell wall shape-determining protein;protein_id=YP_402250.1;transl_table=11
NC_007606.1	RefSeq	gene	539118	541019	.	-	.	ID=gene549;Dbxref=GeneID:3797352;Name=mrdA;Note=SDY0557;gbkey=Gene;gene=mrdA;gene_biotype=protein_coding;locus_tag=SDY_0557
NC_007606.1	RefSeq	CDS	539118	541019	.	-	0	ID=cds490;Parent=gene549;Dbxref=Genbank:YP_402251.1,GeneID:3797352;Name=YP_402251.1;Note=Code: M%3B COG: COG0768;gbkey=CDS;gene=mrdA;product=penicillin-binding protein 2;protein_id=YP_402251.1;transl_table=11
NC_007606.1	RefSeq	gene	541050	541517	.	-	.	ID=gene550;Dbxref=GeneID:3799672;Name=ybeA;Note=SDY0558;gbkey=Gene;gene=ybeA;gene_biotype=protein_coding;locus_tag=SDY_0558
NC_007606.1	RefSeq	CDS	541050	541517	.	-	0	ID=cds491;Parent=gene550;Dbxref=Genbank:YP_402252.1,GeneID:3799672;Name=YP_402252.1;Note=SPOUT methyltransferase%3B crystal structure shows homodimer%3B in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA;gbkey=CDS;gene=ybeA;product=rRNA large subunit methyltransferase;protein_id=YP_402252.1;transl_table=11
NC_007606.1	RefSeq	gene	541521	541838	.	-	.	ID=gene551;Dbxref=GeneID:3799673;Name=ybeB;Note=SDY0559;gbkey=Gene;gene=ybeB;gene_biotype=protein_coding;locus_tag=SDY_0559
NC_007606.1	RefSeq	CDS	541521	541838	.	-	0	ID=cds492;Parent=gene551;Dbxref=Genbank:YP_402253.2,GeneID:3799673;Name=YP_402253.2;Note=Code: S%3B COG: COG0799;gbkey=CDS;gene=ybeB;product=hypothetical protein;protein_id=YP_402253.2;transl_table=11
NC_007606.1	RefSeq	gene	542098	542717	.	-	.	ID=gene552;Dbxref=GeneID:3799674;Name=phpB;Note=''SDY0560%3B frameshift%3B original product: similar to Salmonella cobC%2C a phosphohistidine protein'';gbkey=Gene;gene=phpB;gene_biotype=pseudogene;locus_tag=SDY_0560;pseudo=true
NC_007606.1	RefSeq	gene	542741	543382	.	-	.	ID=gene553;Dbxref=GeneID:3799675;Name=nadD;Note=SDY0561;gbkey=Gene;gene=nadD;gene_biotype=protein_coding;locus_tag=SDY_0561
NC_007606.1	RefSeq	CDS	542741	543382	.	-	0	ID=cds493;Parent=gene553;Dbxref=Genbank:YP_402254.1,GeneID:3799675;Name=YP_402254.1;Note=transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase%3B essential enzyme in bacteria;gbkey=CDS;gene=nadD;product=nicotinic acid mononucleotide adenylyltransferase;protein_id=YP_402254.1;transl_table=11
NC_007606.1	RefSeq	gene	543384	544415	.	-	.	ID=gene554;Dbxref=GeneID:3799676;Name=holA;Note=SDY0562;gbkey=Gene;gene=holA;gene_biotype=protein_coding;locus_tag=SDY_0562
NC_007606.1	RefSeq	CDS	543384	544415	.	-	0	ID=cds494;Parent=gene554;Dbxref=Genbank:YP_402255.1,GeneID:3799676;Name=YP_402255.1;Note=required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA;gbkey=CDS;gene=holA;product=DNA polymerase III subunit delta;protein_id=YP_402255.1;transl_table=11
NC_007606.1	RefSeq	gene	544415	544996	.	-	.	ID=gene555;Dbxref=GeneID:3799677;Name=rlpB;Note=SDY0563;gbkey=Gene;gene=rlpB;gene_biotype=protein_coding;locus_tag=SDY_0563
NC_007606.1	RefSeq	CDS	544415	544996	.	-	0	ID=cds495;Parent=gene555;Dbxref=Genbank:YP_402256.1,GeneID:3799677;Name=YP_402256.1;Note=rare lipoprotein B%3B involved in the assembly of LPS in the outer membrane;gbkey=CDS;gene=rlpB;product=LPS-assembly lipoprotein RlpB;protein_id=YP_402256.1;transl_table=11
NC_007606.1	RefSeq	gene	545011	547593	.	-	.	ID=gene556;Dbxref=GeneID:3799678;Name=leuS;Note=SDY0564;gbkey=Gene;gene=leuS;gene_biotype=protein_coding;locus_tag=SDY_0564
NC_007606.1	RefSeq	CDS	545011	547593	.	-	0	ID=cds496;Parent=gene556;Dbxref=Genbank:YP_402257.1,GeneID:3799678;Name=YP_402257.1;Note=''leucine--tRNA ligase%3B LeuRS%3B class-I aminoacyl-tRNA synthetase%3B charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA%3B due to the large number of codons that tRNA(Leu) recognizes%2C the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA%2C but instead recognition is dependent on a conserved discriminator base A37 and a long arm%3B an editing domain hydrolyzes misformed products%3B in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase'';gbkey=CDS;gene=leuS;product=leucyl-tRNA synthetase;protein_id=YP_402257.1;transl_table=11
NC_007606.1	RefSeq	region	547720	548968	.	+	.	ID=id76;gbkey=mobile_element
NC_007606.1	RefSeq	gene	547792	548094	.	+	.	ID=gene557;Dbxref=GeneID:3799679;Name=SDY_0565;Note=SDY0565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0565
NC_007606.1	RefSeq	CDS	547792	548094	.	+	0	ID=cds497;Parent=gene557;Dbxref=Genbank:YP_402258.1,GeneID:3799679;Name=YP_402258.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_402258.1;transl_table=11
NC_007606.1	RefSeq	gene	548121	548960	.	+	.	ID=gene558;Dbxref=GeneID:3799680;Name=SDY_0566;Note=SDY0566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0566
NC_007606.1	RefSeq	CDS	548121	548960	.	+	0	ID=cds498;Parent=gene558;Dbxref=Genbank:YP_402259.1,GeneID:3799680;Name=YP_402259.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS911 integrase core domain-containing protein;protein_id=YP_402259.1;transl_table=11
NC_007606.1	RefSeq	gene	549081	549563	.	+	.	ID=gene559;Dbxref=GeneID:3799681;Name=ybeL;Note=SDY0567;gbkey=Gene;gene=ybeL;gene_biotype=protein_coding;locus_tag=SDY_0567
NC_007606.1	RefSeq	CDS	549081	549563	.	+	0	ID=cds499;Parent=gene559;Dbxref=Genbank:YP_402260.1,GeneID:3799681;Name=YP_402260.1;gbkey=CDS;gene=ybeL;product=hypothetical protein;protein_id=YP_402260.1;transl_table=11
NC_007606.1	RefSeq	gene	549633	550616	.	-	.	ID=gene560;Dbxref=GeneID:3799682;Name=ybeQ;Note=SDY0568;gbkey=Gene;gene=ybeQ;gene_biotype=protein_coding;locus_tag=SDY_0568
NC_007606.1	RefSeq	CDS	549633	550616	.	-	0	ID=cds500;Parent=gene560;Dbxref=Genbank:YP_402261.1,GeneID:3799682;Name=YP_402261.1;Note=Code: R%3B COG: COG0790;gbkey=CDS;gene=ybeQ;product=hypothetical protein;protein_id=YP_402261.1;transl_table=11
NC_007606.1	RefSeq	region	550830	551597	.	-	.	ID=id77;gbkey=mobile_element
NC_007606.1	RefSeq	gene	550845	551222	.	-	.	ID=gene561;Dbxref=GeneID:3799683;Name=insB;Note=SDY0569;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0569
NC_007606.1	RefSeq	CDS	550845	551222	.	-	0	ID=cds501;Parent=gene561;Dbxref=Genbank:YP_402262.1,GeneID:3799683;Name=YP_402262.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402262.1;transl_table=11
NC_007606.1	RefSeq	gene	551267	551542	.	-	.	ID=gene562;Dbxref=GeneID:3799684;Name=insA;Note=SDY0570;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0570
NC_007606.1	RefSeq	CDS	551267	551542	.	-	0	ID=cds502;Parent=gene562;Dbxref=Genbank:YP_402263.1,GeneID:3799684;Name=YP_402263.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402263.1;transl_table=11
NC_007606.1	RefSeq	region	551598	552342	.	-	.	ID=id78;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	552013	552285	.	-	.	ID=gene563;Dbxref=GeneID:18262965;Name=SDY_0572a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0572a
NC_007606.1	RefSeq	CDS	552013	552285	.	-	0	ID=cds503;Parent=gene563;Dbxref=Genbank:YP_009000652.1,GeneID:18262965;Name=YP_009000652.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000652.1;transl_table=11
NC_007606.1	RefSeq	gene	552537	552610	.	-	.	ID=gene564;Dbxref=GeneID:3799687;Name=SDY_0573;Note=SDY0573;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0573
NC_007606.1	RefSeq	tRNA	552537	552610	.	-	.	ID=rna9;Parent=gene564;Dbxref=GeneID:3799687;codons=62;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	exon	552537	552610	.	-	.	ID=id79;Parent=rna9;Dbxref=GeneID:3799687;codons=62;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	gene	552614	552689	.	-	.	ID=gene565;Dbxref=GeneID:3799688;Name=SDY_0574;Note=SDY0574;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0574
NC_007606.1	RefSeq	tRNA	552614	552689	.	-	.	ID=rna10;Parent=gene565;Dbxref=GeneID:3799688;codons=38;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	exon	552614	552689	.	-	.	ID=id80;Parent=rna10;Dbxref=GeneID:3799688;codons=38;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	gene	552692	552768	.	-	.	ID=gene566;Dbxref=GeneID:3799689;Name=SDY_0575;Note=SDY0575;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0575
NC_007606.1	RefSeq	tRNA	552692	552768	.	-	.	ID=rna11;Parent=gene566;Dbxref=GeneID:3799689;codons=46;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	exon	552692	552768	.	-	.	ID=id81;Parent=rna11;Dbxref=GeneID:3799689;codons=46;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	gene	552770	552846	.	-	.	ID=gene567;Dbxref=GeneID:3798980;Name=SDY_0576;Note=SDY0576;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0576
NC_007606.1	RefSeq	tRNA	552770	552846	.	-	.	ID=rna12;Parent=gene567;Dbxref=GeneID:3798980;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	exon	552770	552846	.	-	.	ID=id82;Parent=rna12;Dbxref=GeneID:3798980;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	gene	553055	553612	.	-	.	ID=gene568;Dbxref=GeneID:3798981;Name=SDY_0577;Note=SDY0577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0577
NC_007606.1	RefSeq	CDS	553055	553612	.	-	0	ID=cds504;Parent=gene568;Dbxref=Genbank:YP_402266.1,GeneID:3798981;Name=YP_402266.1;gbkey=CDS;product=bacteriophage protein;protein_id=YP_402266.1;transl_table=11
NC_007606.1	RefSeq	gene	553885	554439	.	-	.	ID=gene569;Dbxref=GeneID:3798982;Name=SDY_0578;Note=SDY0578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0578
NC_007606.1	RefSeq	CDS	553885	554439	.	-	0	ID=cds505;Parent=gene569;Dbxref=Genbank:YP_402267.1,GeneID:3798982;Name=YP_402267.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402267.1;transl_table=11
NC_007606.1	RefSeq	gene	554436	554726	.	-	.	ID=gene570;Dbxref=GeneID:3798983;Name=SDY_0579;Note=SDY0579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0579
NC_007606.1	RefSeq	CDS	554436	554726	.	-	0	ID=cds506;Parent=gene570;Dbxref=Genbank:YP_402268.1,GeneID:3798983;Name=YP_402268.1;gbkey=CDS;product=bacteriophage protein;protein_id=YP_402268.1;transl_table=11
NC_007606.1	RefSeq	region	554736	554964	.	+	.	ID=id83;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	554933	555538	.	-	.	ID=gene571;Dbxref=GeneID:3798984;Name=SDY_0580;Note=SDY0580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0580
NC_007606.1	RefSeq	CDS	554933	555538	.	-	0	ID=cds507;Parent=gene571;Dbxref=Genbank:YP_402269.1,GeneID:3798984;Name=YP_402269.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402269.1;transl_table=11
NC_007606.1	RefSeq	gene	555577	555864	.	-	.	ID=gene572;Dbxref=GeneID:3798985;Name=SDY_0581;Note=SDY0581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0581
NC_007606.1	RefSeq	CDS	555577	555864	.	-	0	ID=cds508;Parent=gene572;Dbxref=Genbank:YP_402270.1,GeneID:3798985;Name=YP_402270.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402270.1;transl_table=11
NC_007606.1	RefSeq	gene	555930	556175	.	-	.	ID=gene573;Dbxref=GeneID:3798986;Name=SDY_0582;Note=SDY0582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0582
NC_007606.1	RefSeq	CDS	555930	556175	.	-	0	ID=cds509;Parent=gene573;Dbxref=Genbank:YP_402271.1,GeneID:3798986;Name=YP_402271.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402271.1;transl_table=11
NC_007606.1	RefSeq	region	556038	557315	.	-	.	ID=id84;gbkey=mobile_element
NC_007606.1	RefSeq	gene	556949	557251	.	-	.	ID=gene574;Dbxref=GeneID:3798989;Name=SDY_0585;Note=SDY0585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0585
NC_007606.1	RefSeq	CDS	556949	557251	.	-	0	ID=cds510;Parent=gene574;Dbxref=Genbank:YP_402274.1,GeneID:3798989;Name=YP_402274.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402274.1;transl_table=11
NC_007606.1	RefSeq	gene	557290	557649	.	+	.	ID=gene575;Dbxref=GeneID:3798990;Name=SDY_0586;Note=SDY0586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0586
NC_007606.1	RefSeq	CDS	557290	557649	.	+	0	ID=cds511;Parent=gene575;Dbxref=Genbank:YP_402275.1,GeneID:3798990;Name=YP_402275.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_402275.1;transl_table=11
NC_007606.1	RefSeq	region	557316	558523	.	+	.	ID=id85;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	557676	558515	.	+	.	ID=gene576;Dbxref=GeneID:3798991;Name=SDY_0587;Note=SDY0587;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0587
NC_007606.1	RefSeq	CDS	557676	558515	.	+	0	ID=cds512;Parent=gene576;Dbxref=Genbank:YP_402276.1,GeneID:3798991;Name=YP_402276.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS911 integrase core domain-containing protein;protein_id=YP_402276.1;transl_table=11
NC_007606.1	RefSeq	gene	558682	559356	.	-	.	ID=gene577;Dbxref=GeneID:3798992;Name=gltK;Note=SDY0588;gbkey=Gene;gene=gltK;gene_biotype=protein_coding;locus_tag=SDY_0588
NC_007606.1	RefSeq	CDS	558682	559356	.	-	0	ID=cds513;Parent=gene577;Dbxref=Genbank:YP_402277.1,GeneID:3798992;Name=YP_402277.1;Note=Code: E%3B COG: COG0765;gbkey=CDS;gene=gltK;product=glutamate/aspartate ABC transporter permease;protein_id=YP_402277.1;transl_table=11
NC_007606.1	RefSeq	gene	559356	559974	.	-	.	ID=gene578;Dbxref=GeneID:3798993;Name=gltJ;Note=SDY0589%3B frameshift%3B original product: glutamate/aspartate transport system permease;gbkey=Gene;gene=gltJ;gene_biotype=pseudogene;locus_tag=SDY_0589;pseudo=true
NC_007606.1	RefSeq	region	559949	561214	.	+	.	ID=id86;gbkey=mobile_element;gene=gltJ
NC_007606.1	RefSeq	gene	560013	560315	.	+	.	ID=gene579;Dbxref=GeneID:3798994;Name=SDY_0590;Note=SDY0590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0590
NC_007606.1	RefSeq	CDS	560013	560315	.	+	0	ID=cds514;Parent=gene579;Dbxref=Genbank:YP_402278.1,GeneID:3798994;Name=YP_402278.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402278.1;transl_table=11
NC_007606.1	RefSeq	gene	560456	561268	.	+	.	ID=gene580;Dbxref=GeneID:3798995;Name=SDY_0591;Note=SDY0591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0591
NC_007606.1	RefSeq	CDS	560456	561268	.	+	0	ID=cds515;Parent=gene580;Dbxref=Genbank:YP_402279.1,GeneID:3798995;Name=YP_402279.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402279.1;transl_table=11
NC_007606.1	RefSeq	gene	561524	562432	.	-	.	ID=gene581;Dbxref=GeneID:3798996;Name=ybeJ;Note=SDY0592;gbkey=Gene;gene=ybeJ;gene_biotype=protein_coding;locus_tag=SDY_0592
NC_007606.1	RefSeq	CDS	561524	562432	.	-	0	ID=cds516;Parent=gene581;Dbxref=Genbank:YP_402280.1,GeneID:3798996;Name=YP_402280.1;Note=Code: ET%3B COG: COG0834;gbkey=CDS;gene=ybeJ;product=glutamate/aspartate ABC transporter substrate-binding protein;protein_id=YP_402280.1;transl_table=11
NC_007606.1	RefSeq	gene	562829	564367	.	-	.	ID=gene582;Dbxref=GeneID:3796099;Name=lnt;Note=SDY0593;gbkey=Gene;gene=lnt;gene_biotype=protein_coding;locus_tag=SDY_0593
NC_007606.1	RefSeq	CDS	562829	564367	.	-	0	ID=cds517;Parent=gene582;Dbxref=Genbank:YP_402281.1,GeneID:3796099;Name=YP_402281.1;Note=Transfers the fatty acyl group on membrane lipoproteins;gbkey=CDS;gene=lnt;product=apolipoprotein N-acyltransferase;protein_id=YP_402281.1;transl_table=11
NC_007606.1	RefSeq	gene	564392	565270	.	-	.	ID=gene583;Dbxref=GeneID:3796100;Name=ybeX;Note=SDY0594;gbkey=Gene;gene=ybeX;gene_biotype=protein_coding;locus_tag=SDY_0594
NC_007606.1	RefSeq	CDS	564392	565270	.	-	0	ID=cds518;Parent=gene583;Dbxref=Genbank:YP_402282.1,GeneID:3796100;Name=YP_402282.1;Note=Code: P%3B COG: COG4535;gbkey=CDS;gene=ybeX;product=transport protein;protein_id=YP_402282.1;transl_table=11
NC_007606.1	RefSeq	gene	565360	565827	.	-	.	ID=gene584;Dbxref=GeneID:3796101;Name=ybeY;Note=SDY0595;gbkey=Gene;gene=ybeY;gene_biotype=protein_coding;locus_tag=SDY_0595
NC_007606.1	RefSeq	CDS	565360	565827	.	-	0	ID=cds519;Parent=gene584;Dbxref=Genbank:YP_402283.1,GeneID:3796101;Name=YP_402283.1;Note=Code: R%3B COG: COG0319;gbkey=CDS;gene=ybeY;product=metalloprotease;protein_id=YP_402283.1;transl_table=11
NC_007606.1	RefSeq	gene	565824	566903	.	-	.	ID=gene585;Dbxref=GeneID:3796102;Name=ybeZ;Note=SDY0596;gbkey=Gene;gene=ybeZ;gene_biotype=protein_coding;locus_tag=SDY_0596
NC_007606.1	RefSeq	CDS	565824	566903	.	-	0	ID=cds520;Parent=gene585;Dbxref=Genbank:YP_402284.1,GeneID:3796102;Name=YP_402284.1;Note=Code: T%3B COG: COG1702;gbkey=CDS;gene=ybeZ;product=ATP-binding protein;protein_id=YP_402284.1;transl_table=11
NC_007606.1	RefSeq	gene	567017	568441	.	-	.	ID=gene586;Dbxref=GeneID:3796103;Name=yleA;Note=SDY0597;gbkey=Gene;gene=yleA;gene_biotype=protein_coding;locus_tag=SDY_0597
NC_007606.1	RefSeq	CDS	567017	568441	.	-	0	ID=cds521;Parent=gene586;Dbxref=Genbank:YP_402285.1,GeneID:3796103;Name=YP_402285.1;Note=Code: J%3B COG: COG0621;gbkey=CDS;gene=yleA;product=hypothetical protein;protein_id=YP_402285.1;transl_table=11
NC_007606.1	RefSeq	gene	568587	569762	.	+	.	ID=gene587;Dbxref=GeneID:3796104;Name=ubiF;Note=SDY0598;gbkey=Gene;gene=ubiF;gene_biotype=protein_coding;gene_synonym=yleB;locus_tag=SDY_0598
NC_007606.1	RefSeq	CDS	568587	569762	.	+	0	ID=cds522;Parent=gene587;Dbxref=Genbank:YP_402286.1,GeneID:3796104;Name=YP_402286.1;Note=''catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1%2C4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol%3B functions in the biosynthesis of ubiquinone or coenzyme Q'';gbkey=CDS;gene=ubiF;product=2-octaprenyl-3-methyl-6-methoxy-1%2C4-benzoquinol hydroxylase;protein_id=YP_402286.1;transl_table=11
NC_007606.1	RefSeq	gene	569916	569990	.	-	.	ID=gene588;Dbxref=GeneID:3796106;Name=SDY_0600;Note=SDY0600;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0600
NC_007606.1	RefSeq	tRNA	569916	569990	.	-	.	ID=rna13;Parent=gene588;Dbxref=GeneID:3796106;codons=27;gbkey=tRNA;product=tRNA-Gln
NC_007606.1	RefSeq	exon	569916	569990	.	-	.	ID=id87;Parent=rna13;Dbxref=GeneID:3796106;codons=27;gbkey=tRNA;product=tRNA-Gln
NC_007606.1	RefSeq	gene	570039	570115	.	-	.	ID=gene589;Dbxref=GeneID:3796108;Name=SDY_0602;Note=SDY0602;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0602
NC_007606.1	RefSeq	tRNA	570039	570115	.	-	.	ID=rna14;Parent=gene589;Dbxref=GeneID:3796108;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	exon	570039	570115	.	-	.	ID=id88;Parent=rna14;Dbxref=GeneID:3796108;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	gene	570131	570205	.	-	.	ID=gene590;Dbxref=GeneID:3796109;Name=SDY_0603;Note=SDY0603;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0603
NC_007606.1	RefSeq	tRNA	570131	570205	.	-	.	ID=rna15;Parent=gene590;Dbxref=GeneID:3796109;codons=26;gbkey=tRNA;product=tRNA-Gln
NC_007606.1	RefSeq	exon	570131	570205	.	-	.	ID=id89;Parent=rna15;Dbxref=GeneID:3796109;codons=26;gbkey=tRNA;product=tRNA-Gln
NC_007606.1	RefSeq	gene	570240	570314	.	-	.	ID=gene591;Dbxref=GeneID:3796111;Name=SDY_0605;Note=SDY0605;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0605
NC_007606.1	RefSeq	tRNA	570240	570314	.	-	.	ID=rna16;Parent=gene591;Dbxref=GeneID:3796111;codons=26;gbkey=tRNA;product=tRNA-Gln
NC_007606.1	RefSeq	exon	570240	570314	.	-	.	ID=id90;Parent=rna16;Dbxref=GeneID:3796111;codons=26;gbkey=tRNA;product=tRNA-Gln
NC_007606.1	RefSeq	gene	570338	570422	.	-	.	ID=gene592;Dbxref=GeneID:3796112;Name=SDY_0606;Note=SDY0606;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0606
NC_007606.1	RefSeq	tRNA	570338	570422	.	-	.	ID=rna17;Parent=gene592;Dbxref=GeneID:3796112;codons=18;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	exon	570338	570422	.	-	.	ID=id91;Parent=rna17;Dbxref=GeneID:3796112;codons=18;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	gene	570431	570507	.	-	.	ID=gene593;Dbxref=GeneID:3798560;Name=SDY_0607;Note=SDY0607;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0607
NC_007606.1	RefSeq	tRNA	570431	570507	.	-	.	ID=rna18;Parent=gene593;Dbxref=GeneID:3798560;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	exon	570431	570507	.	-	.	ID=id92;Parent=rna18;Dbxref=GeneID:3798560;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	gene	570887	572551	.	-	.	ID=gene594;Dbxref=GeneID:3798561;Name=asnB;Note=SDY0608;gbkey=Gene;gene=asnB;gene_biotype=protein_coding;locus_tag=SDY_0608
NC_007606.1	RefSeq	CDS	570887	572551	.	-	0	ID=cds523;Parent=gene594;Dbxref=Genbank:YP_402290.1,GeneID:3798561;Name=YP_402290.1;Note=''functions in asparagine biosynthesis%3B converts glutamine%2C aspartate%2C ATP%2C and water to glutamate%2C asparagine%2C pyrophosphate and AMP'';gbkey=CDS;gene=asnB;product=asparagine synthetase B;protein_id=YP_402290.1;transl_table=11
NC_007606.1	RefSeq	gene	572808	573560	.	-	.	ID=gene595;Dbxref=GeneID:3798562;Name=nagD;Note=SDY0609;gbkey=Gene;gene=nagD;gene_biotype=protein_coding;locus_tag=SDY_0609
NC_007606.1	RefSeq	CDS	572808	573560	.	-	0	ID=cds524;Parent=gene595;Dbxref=Genbank:YP_402291.1,GeneID:3798562;Name=YP_402291.1;Note=Code: G%3B COG: COG0647;gbkey=CDS;gene=nagD;product=UMP phosphatase;protein_id=YP_402291.1;transl_table=11
NC_007606.1	RefSeq	gene	573608	574828	.	-	.	ID=gene596;Dbxref=GeneID:3798563;Name=nagC;Note=SDY0610;gbkey=Gene;gene=nagC;gene_biotype=protein_coding;locus_tag=SDY_0610
NC_007606.1	RefSeq	CDS	573608	574828	.	-	0	ID=cds525;Parent=gene596;Dbxref=Genbank:YP_402292.1,GeneID:3798563;Name=YP_402292.1;Note=Code: KG%3B COG: COG1940;gbkey=CDS;gene=nagC;product=N-acetylglucosamine operon transcriptional repressor;protein_id=YP_402292.1;transl_table=11
NC_007606.1	RefSeq	gene	574837	575985	.	-	.	ID=gene597;Dbxref=GeneID:3798564;Name=nagA;Note=SDY0611;gbkey=Gene;gene=nagA;gene_biotype=protein_coding;locus_tag=SDY_0611
NC_007606.1	RefSeq	CDS	574837	575985	.	-	0	ID=cds526;Parent=gene597;Dbxref=Genbank:YP_402293.1,GeneID:3798564;Name=YP_402293.1;Note=catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate;gbkey=CDS;gene=nagA;product=N-acetylglucosamine-6-phosphate deacetylase;protein_id=YP_402293.1;transl_table=11
NC_007606.1	RefSeq	gene	576045	576845	.	-	.	ID=gene598;Dbxref=GeneID:3798565;Name=nagB;Note=SDY0612;gbkey=Gene;gene=nagB;gene_biotype=protein_coding;locus_tag=SDY_0612
NC_007606.1	RefSeq	CDS	576045	576845	.	-	0	ID=cds527;Parent=gene598;Dbxref=Genbank:YP_402294.1,GeneID:3798565;Name=YP_402294.1;Note=catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate;gbkey=CDS;gene=nagB;product=glucosamine-6-phosphate deaminase;protein_id=YP_402294.1;transl_table=11
NC_007606.1	RefSeq	gene	577179	579125	.	+	.	ID=gene599;Dbxref=GeneID:3798566;Name=nagE;Note=SDY0613;gbkey=Gene;gene=nagE;gene_biotype=protein_coding;locus_tag=SDY_0613
NC_007606.1	RefSeq	CDS	577179	579125	.	+	0	ID=cds528;Parent=gene599;Dbxref=Genbank:YP_402295.1,GeneID:3798566;Name=YP_402295.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;gene=nagE;product=PTS system N-acetyl glucosamine specific transporter subunit IIABC;protein_id=YP_402295.1;transl_table=11
NC_007606.1	RefSeq	gene	579328	580992	.	+	.	ID=gene600;Dbxref=GeneID:3798567;Name=glnS;Note=SDY0614;gbkey=Gene;gene=glnS;gene_biotype=protein_coding;locus_tag=SDY_0614
NC_007606.1	RefSeq	CDS	579328	580992	.	+	0	ID=cds529;Parent=gene600;Dbxref=Genbank:YP_402296.1,GeneID:3798567;Name=YP_402296.1;Note=''catalyzes a two-step reaction%2C first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA'';gbkey=CDS;gene=glnS;product=glutaminyl-tRNA synthetase;protein_id=YP_402296.1;transl_table=11
NC_007606.1	RefSeq	region	581084	581852	.	-	.	ID=id93;gbkey=mobile_element
NC_007606.1	RefSeq	gene	581099	581476	.	-	.	ID=gene601;Dbxref=GeneID:3798568;Name=insB;Note=SDY0615;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0615
NC_007606.1	RefSeq	CDS	581099	581476	.	-	0	ID=cds530;Parent=gene601;Dbxref=Genbank:YP_402297.1,GeneID:3798568;Name=YP_402297.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402297.1;transl_table=11
NC_007606.1	RefSeq	gene	581521	581826	.	-	.	ID=gene602;Dbxref=GeneID:3798569;Name=insA;Note=SDY0616;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0616
NC_007606.1	RefSeq	CDS	581521	581826	.	-	0	ID=cds531;Parent=gene602;Dbxref=Genbank:YP_402298.1,GeneID:3798569;Name=YP_402298.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_402298.1;transl_table=11
NC_007606.1	RefSeq	region	581852	582500	.	+	.	ID=id94;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	582091	582486	.	+	.	ID=gene603;Dbxref=GeneID:3798570;Name=SDY_0617;Note=SDY0617;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0617
NC_007606.1	RefSeq	CDS	582091	582486	.	+	0	ID=cds532;Parent=gene603;Dbxref=Genbank:YP_402299.1,GeneID:3798570;Name=YP_402299.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402299.1;transl_table=11
NC_007606.1	RefSeq	gene	582716	583078	.	+	.	ID=gene604;Dbxref=GeneID:3798571;Name=SDY_0618;Note=SDY0618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0618
NC_007606.1	RefSeq	CDS	582716	583078	.	+	0	ID=cds533;Parent=gene604;Dbxref=Genbank:YP_402300.1,GeneID:3798571;Name=YP_402300.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402300.1;transl_table=11
NC_007606.1	RefSeq	region	583074	583842	.	+	.	ID=id95;gbkey=mobile_element
NC_007606.1	RefSeq	gene	583129	583404	.	+	.	ID=gene605;Dbxref=GeneID:3798572;Name=insA;Note=SDY0619;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0619
NC_007606.1	RefSeq	CDS	583129	583404	.	+	0	ID=cds534;Parent=gene605;Dbxref=Genbank:YP_402301.1,GeneID:3798572;Name=YP_402301.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_402301.1;transl_table=11
NC_007606.1	RefSeq	gene	584950	585276	.	-	.	ID=gene606;Dbxref=GeneID:18262966;Name=SDY_0619a;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0619a;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	585361	585807	.	-	.	ID=gene607;Dbxref=GeneID:3798576;Name=fur;Note=SDY0623;gbkey=Gene;gene=fur;gene_biotype=protein_coding;locus_tag=SDY_0623
NC_007606.1	RefSeq	CDS	585361	585807	.	-	0	ID=cds535;Parent=gene607;Dbxref=Genbank:YP_402305.1,GeneID:3798576;Name=YP_402305.1;Note=negatively regulates a number of operons that encode enzymes involved in iron transport%3B activated by manganese%3B forms a homodimer;gbkey=CDS;gene=fur;product=ferric uptake regulator;protein_id=YP_402305.1;transl_table=11
NC_007606.1	RefSeq	gene	586096	586626	.	-	.	ID=gene608;Dbxref=GeneID:3798577;Name=fldA;Note=SDY0624;gbkey=Gene;gene=fldA;gene_biotype=protein_coding;locus_tag=SDY_0624
NC_007606.1	RefSeq	CDS	586096	586626	.	-	0	ID=cds536;Parent=gene608;Dbxref=Genbank:YP_402306.1,GeneID:3798577;Name=YP_402306.1;Note=''An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group'';gbkey=CDS;gene=fldA;product=flavodoxin FldA;protein_id=YP_402306.1;transl_table=11
NC_007606.1	RefSeq	gene	586766	587128	.	-	.	ID=gene609;Dbxref=GeneID:3798578;Name=ybfE;Note=SDY0625;gbkey=Gene;gene=ybfE;gene_biotype=protein_coding;locus_tag=SDY_0625
NC_007606.1	RefSeq	CDS	586766	587128	.	-	0	ID=cds537;Parent=gene609;Dbxref=Genbank:YP_402307.1,GeneID:3798578;Name=YP_402307.1;gbkey=CDS;gene=ybfE;product=LexA regulated protein;protein_id=YP_402307.1;transl_table=11
NC_007606.1	RefSeq	gene	587199	587963	.	-	.	ID=gene610;Dbxref=GeneID:3799383;Name=ybfF;Note=SDY0626;gbkey=Gene;gene=ybfF;gene_biotype=protein_coding;locus_tag=SDY_0626
NC_007606.1	RefSeq	CDS	587199	587963	.	-	0	ID=cds538;Parent=gene610;Dbxref=Genbank:YP_402308.1,GeneID:3799383;Name=YP_402308.1;Note=Code: R%3B COG: COG0596;gbkey=CDS;gene=ybfF;product=hypothetical protein;protein_id=YP_402308.1;transl_table=11
NC_007606.1	RefSeq	gene	588148	588693	.	+	.	ID=gene611;Dbxref=GeneID:3799384;Name=seqA;Note=SDY0627;gbkey=Gene;gene=seqA;gene_biotype=protein_coding;locus_tag=SDY_0627
NC_007606.1	RefSeq	CDS	588148	588693	.	+	0	ID=cds539;Parent=gene611;Dbxref=Genbank:YP_402309.1,GeneID:3799384;Name=YP_402309.1;Note=negative modulator of the initiation of chromosome replication;gbkey=CDS;gene=seqA;product=replication initiation regulator SeqA;protein_id=YP_402309.1;transl_table=11
NC_007606.1	RefSeq	gene	588719	590359	.	+	.	ID=gene612;Dbxref=GeneID:3799385;Name=pgm;Note=SDY0628;gbkey=Gene;gene=pgm;gene_biotype=protein_coding;locus_tag=SDY_0628
NC_007606.1	RefSeq	CDS	588719	590359	.	+	0	ID=cds540;Parent=gene612;Dbxref=Genbank:YP_402310.1,GeneID:3799385;Name=YP_402310.1;Note=catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate;gbkey=CDS;gene=pgm;product=phosphoglucomutase;protein_id=YP_402310.1;transl_table=11
NC_007606.1	RefSeq	gene	590523	591200	.	-	.	ID=gene613;Dbxref=GeneID:3799386;Name=kdpE;Note=SDY0629;gbkey=Gene;gene=kdpE;gene_biotype=protein_coding;locus_tag=SDY_0629
NC_007606.1	RefSeq	CDS	590523	591200	.	-	0	ID=cds541;Parent=gene613;Dbxref=Genbank:YP_402311.1,GeneID:3799386;Name=YP_402311.1;Note=response regulator in two-component regulatory system with KdpD%3B regulates the kdp operon involved in potassium transport;gbkey=CDS;gene=kdpE;product=DNA-binding transcriptional activator KdpE;protein_id=YP_402311.1;transl_table=11
NC_007606.1	RefSeq	gene	591346	593887	.	-	.	ID=gene614;Dbxref=GeneID:3799387;Name=kdpD;Note=SDY0630%3B frameshift and contains in-frame stop codon%3B original product: sensor for high-affinity potassium transport system;gbkey=Gene;gene=kdpD;gene_biotype=pseudogene;locus_tag=SDY_0630;pseudo=true
NC_007606.1	RefSeq	gene	593880	594452	.	-	.	ID=gene615;Dbxref=GeneID:3799388;Name=kdpC;Note=SDY0631;gbkey=Gene;gene=kdpC;gene_biotype=protein_coding;locus_tag=SDY_0631
NC_007606.1	RefSeq	CDS	593880	594452	.	-	0	ID=cds542;Parent=gene615;Dbxref=Genbank:YP_402312.1,GeneID:3799388;Name=YP_402312.1;Note=''One of the components of the high-affinity ATP-driven potassium transport (or KDP)system%2C which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex'';gbkey=CDS;gene=kdpC;product=potassium-transporting ATPase subunit C;protein_id=YP_402312.1;transl_table=11
NC_007606.1	RefSeq	gene	594461	596487	.	-	.	ID=gene616;Dbxref=GeneID:3799389;Name=kdpB;Note=''SDY0632%3B frameshift%3B original product: ATPase of high-affinity potassium transport system%2C B chain'';gbkey=Gene;gene=kdpB;gene_biotype=pseudogene;locus_tag=SDY_0632;pseudo=true
NC_007606.1	RefSeq	gene	596510	598183	.	-	.	ID=gene617;Dbxref=GeneID:3799390;Name=kdpA;Note=''SDY0633%3B contains in-frame stop codon%3B original product: ATPase of high-affinity potassium transport system%2C A chain'';gbkey=Gene;gene=kdpA;gene_biotype=pseudogene;locus_tag=SDY_0633;pseudo=true
NC_007606.1	RefSeq	gene	598183	598272	.	-	.	ID=gene618;Dbxref=GeneID:3799391;Name=kdpF;Note=SDY0634;gbkey=Gene;gene=kdpF;gene_biotype=protein_coding;locus_tag=SDY_0634
NC_007606.1	RefSeq	CDS	598183	598272	.	-	0	ID=cds543;Parent=gene618;Dbxref=Genbank:YP_402313.1,GeneID:3799391;Name=YP_402313.1;gbkey=CDS;gene=kdpF;product=potassium ion accessory transporter KdpF;protein_id=YP_402313.1;transl_table=11
NC_007606.1	RefSeq	gene	598585	598791	.	+	.	ID=gene619;Dbxref=GeneID:3799392;Name=ybfA;Note=SDY0635;gbkey=Gene;gene=ybfA;gene_biotype=protein_coding;locus_tag=SDY_0635
NC_007606.1	RefSeq	CDS	598585	598791	.	+	0	ID=cds544;Parent=gene619;Dbxref=Genbank:YP_402314.1,GeneID:3799392;Name=YP_402314.1;gbkey=CDS;gene=ybfA;product=hypothetical protein;protein_id=YP_402314.1;transl_table=11
NC_007606.1	RefSeq	gene	599034	602297	.	+	.	ID=gene620;Dbxref=GeneID:3799393;Name=rhsC;Note=SDY0636;gbkey=Gene;gene=rhsC;gene_biotype=protein_coding;locus_tag=SDY_0636
NC_007606.1	RefSeq	CDS	599034	602297	.	+	0	ID=cds545;Parent=gene620;Dbxref=Genbank:YP_402315.1,GeneID:3799393;Name=YP_402315.1;Note=Code: M%3B COG: COG3209;gbkey=CDS;gene=rhsC;product=rhs element protein RhsC;protein_id=YP_402315.1;transl_table=11
NC_007606.1	RefSeq	region	602293	603058	.	-	.	ID=id96;gbkey=mobile_element;gene=rhsC
NC_007606.1	RefSeq	gene	602307	602702	.	-	.	ID=gene621;Dbxref=GeneID:3799394;Name=SDY_0637;Note=SDY0637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0637
NC_007606.1	RefSeq	CDS	602307	602702	.	-	0	ID=cds546;Parent=gene621;Dbxref=Genbank:YP_402316.1,GeneID:3799394;Name=YP_402316.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402316.1;transl_table=11
NC_007606.1	RefSeq	gene	602729	603001	.	-	.	ID=gene622;Dbxref=GeneID:18262967;Name=SDY_0637a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0637a
NC_007606.1	RefSeq	CDS	602729	603001	.	-	0	ID=cds547;Parent=gene622;Dbxref=Genbank:YP_009000653.1,GeneID:18262967;Name=YP_009000653.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000653.1;transl_table=11
NC_007606.1	RefSeq	gene	603144	603710	.	+	.	ID=gene623;Dbxref=GeneID:3799396;Name=SDY_0639;Note=SDY0639;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0639;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	603693	604458	.	-	.	ID=id97;gbkey=mobile_element
NC_007606.1	RefSeq	gene	603707	604102	.	-	.	ID=gene624;Dbxref=GeneID:3799397;Name=SDY_0640;Note=SDY0640;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0640;pseudogene=unknown
NC_007606.1	RefSeq	CDS	603707	604102	.	-	0	ID=cds548;Parent=gene624;Dbxref=Genbank:YP_402319.1,GeneID:3799397;Name=YP_402319.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402319.1;transl_table=11
NC_007606.1	RefSeq	gene	604129	604401	.	-	.	ID=gene625;Dbxref=GeneID:18262968;Name=SDY_0642a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0642a
NC_007606.1	RefSeq	CDS	604129	604401	.	-	0	ID=cds549;Parent=gene625;Dbxref=Genbank:YP_009000654.1,GeneID:18262968;Name=YP_009000654.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000654.1;transl_table=11
NC_007606.1	RefSeq	gene	604976	605485	.	+	.	ID=gene626;Dbxref=GeneID:3799399;Name=ybgA;Note=SDY0642;gbkey=Gene;gene=ybgA;gene_biotype=protein_coding;locus_tag=SDY_0642
NC_007606.1	RefSeq	CDS	604976	605485	.	+	0	ID=cds550;Parent=gene626;Dbxref=Genbank:YP_402321.1,GeneID:3799399;Name=YP_402321.1;Note=Code: S%3B COG: COG3272;gbkey=CDS;gene=ybgA;product=hypothetical protein;protein_id=YP_402321.1;transl_table=11
NC_007606.1	RefSeq	gene	605482	606900	.	+	.	ID=gene627;Dbxref=GeneID:3799400;Name=phrB;Note=SDY0643;gbkey=Gene;gene=phrB;gene_biotype=protein_coding;locus_tag=SDY_0643
NC_007606.1	RefSeq	CDS	605482	606900	.	+	0	ID=cds551;Parent=gene627;Dbxref=Genbank:YP_402322.1,GeneID:3799400;Name=YP_402322.1;Note=UV-induced DNA repair%3B converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers%3B light dependent;gbkey=CDS;gene=phrB;product=deoxyribodipyrimidine photolyase;protein_id=YP_402322.1;transl_table=11
NC_007606.1	RefSeq	gene	607050	608531	.	-	.	ID=gene628;Dbxref=GeneID:3799401;Name=ybgH;Note=SDY0644%3B contains in-frame stop codon%3B original product:  transport protein;gbkey=Gene;gene=ybgH;gene_biotype=pseudogene;locus_tag=SDY_0644;pseudo=true
NC_007606.1	RefSeq	gene	608802	609545	.	+	.	ID=gene629;Dbxref=GeneID:3799709;Name=ybgI;Note=SDY0645;gbkey=Gene;gene=ybgI;gene_biotype=protein_coding;locus_tag=SDY_0645
NC_007606.1	RefSeq	CDS	608802	609545	.	+	0	ID=cds552;Parent=gene629;Dbxref=Genbank:YP_402323.1,GeneID:3799709;Name=YP_402323.1;Note=Code: S%3B COG: COG0327;gbkey=CDS;gene=ybgI;product=hydrolase-oxidase;protein_id=YP_402323.1;transl_table=11
NC_007606.1	RefSeq	gene	609568	610224	.	+	.	ID=gene630;Dbxref=GeneID:3799710;Name=ybgJ;Note=SDY0646;gbkey=Gene;gene=ybgJ;gene_biotype=protein_coding;locus_tag=SDY_0646
NC_007606.1	RefSeq	CDS	609568	610224	.	+	0	ID=cds553;Parent=gene630;Dbxref=Genbank:YP_402324.1,GeneID:3799710;Name=YP_402324.1;Note=Code: E%3B COG: COG2049;gbkey=CDS;gene=ybgJ;product=carboxylase;protein_id=YP_402324.1;transl_table=11
NC_007606.1	RefSeq	gene	610218	611150	.	+	.	ID=gene631;Dbxref=GeneID:3799711;Name=ybgK;Note=SDY0647;gbkey=Gene;gene=ybgK;gene_biotype=protein_coding;locus_tag=SDY_0647
NC_007606.1	RefSeq	CDS	610218	611150	.	+	0	ID=cds554;Parent=gene631;Dbxref=Genbank:YP_402325.1,GeneID:3799711;Name=YP_402325.1;Note=Code: E%3B COG: COG1984;gbkey=CDS;gene=ybgK;product=carboxylase;protein_id=YP_402325.1;transl_table=11
NC_007606.1	RefSeq	gene	611140	611874	.	+	.	ID=gene632;Dbxref=GeneID:3799712;Name=ybgL;Note=SDY0648;gbkey=Gene;gene=ybgL;gene_biotype=protein_coding;locus_tag=SDY_0648
NC_007606.1	RefSeq	CDS	611140	611874	.	+	0	ID=cds555;Parent=gene632;Dbxref=Genbank:YP_402326.1,GeneID:3799712;Name=YP_402326.1;Note=Code: R%3B COG: COG1540;gbkey=CDS;gene=ybgL;product=LamB/YcsF family protein;protein_id=YP_402326.1;transl_table=11
NC_007606.1	RefSeq	gene	611910	612701	.	+	.	ID=gene633;Dbxref=GeneID:3799713;Name=nei;Note=SDY0649;gbkey=Gene;gene=nei;gene_biotype=protein_coding;locus_tag=SDY_0649
NC_007606.1	RefSeq	CDS	611910	612701	.	+	0	ID=cds556;Parent=gene633;Dbxref=Genbank:YP_402327.1,GeneID:3799713;Name=YP_402327.1;Note=5-formyluracil/5-hydroxymethyluracil DNA glycosylase%3B involved in base excision repair of DNA damaged by oxidation or by mutagenic agents%3B acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines%3B has apurinic/apyrimidinic lyase activity;gbkey=CDS;gene=nei;product=endonuclease VIII;protein_id=YP_402327.1;transl_table=11
NC_007606.1	RefSeq	gene	612698	613759	.	-	.	ID=gene634;Dbxref=GeneID:3799714;Name=abrB;Note=SDY0650;gbkey=Gene;gene=abrB;gene_biotype=protein_coding;locus_tag=SDY_0650
NC_007606.1	RefSeq	CDS	612698	613759	.	-	0	ID=cds557;Parent=gene634;Dbxref=Genbank:YP_402328.1,GeneID:3799714;Name=YP_402328.1;Note=Code: R%3B COG: COG3180;gbkey=CDS;gene=abrB;product=transport protein;protein_id=YP_402328.1;transl_table=11
NC_007606.1	RefSeq	gene	613893	614954	.	-	.	ID=gene635;Dbxref=GeneID:3799715;Name=ybgO;Note=SDY0651;gbkey=Gene;gene=ybgO;gene_biotype=protein_coding;locus_tag=SDY_0651
NC_007606.1	RefSeq	CDS	613893	614954	.	-	0	ID=cds558;Parent=gene635;Dbxref=Genbank:YP_402329.1,GeneID:3799715;Name=YP_402329.1;gbkey=CDS;gene=ybgO;product=hypothetical protein;protein_id=YP_402329.1;transl_table=11
NC_007606.1	RefSeq	gene	614951	615646	.	-	.	ID=gene636;Dbxref=GeneID:3799716;Name=ybgP;Note=SDY0652;gbkey=Gene;gene=ybgP;gene_biotype=protein_coding;locus_tag=SDY_0652
NC_007606.1	RefSeq	CDS	614951	615646	.	-	0	ID=cds559;Parent=gene636;Dbxref=Genbank:YP_402330.1,GeneID:3799716;Name=YP_402330.1;Note=Code: NU%3B COG: COG3121;gbkey=CDS;gene=ybgP;product=chaperone;protein_id=YP_402330.1;transl_table=11
NC_007606.1	RefSeq	region	615507	616277	.	+	.	ID=id98;gbkey=mobile_element;gene=ybgP
NC_007606.1	RefSeq	gene	615569	615841	.	+	.	ID=gene637;Dbxref=GeneID:18262969;Name=SDY_0562a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0562a
NC_007606.1	RefSeq	CDS	615569	615841	.	+	0	ID=cds560;Parent=gene637;Dbxref=Genbank:YP_009000655.1,GeneID:18262969;Name=YP_009000655.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000655.1;transl_table=11
NC_007606.1	RefSeq	gene	615868	616263	.	+	.	ID=gene638;Dbxref=GeneID:3799717;Name=SDY_0653;Note=SDY0653;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0653
NC_007606.1	RefSeq	CDS	615868	616263	.	+	0	ID=cds561;Parent=gene638;Dbxref=Genbank:YP_402331.1,GeneID:3799717;Name=YP_402331.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402331.1;transl_table=11
NC_007606.1	RefSeq	gene	616471	618930	.	-	.	ID=gene639;Dbxref=GeneID:3799718;Name=ybgQ;Note=SDY0654%3B contains in-frame stop codon%3B original product:  outer membrane protein;gbkey=Gene;gene=ybgQ;gene_biotype=pseudogene;locus_tag=SDY_0654;pseudo=true
NC_007606.1	RefSeq	gene	618980	619546	.	-	.	ID=gene640;Dbxref=GeneID:3799719;Name=ybgD;Note=SDY0655;gbkey=Gene;gene=ybgD;gene_biotype=protein_coding;locus_tag=SDY_0655
NC_007606.1	RefSeq	CDS	618980	619546	.	-	0	ID=cds562;Parent=gene640;Dbxref=Genbank:YP_402332.1,GeneID:3799719;Name=YP_402332.1;Note=Code: NU%3B COG: COG3539;gbkey=CDS;gene=ybgD;product=fimbrial-like protein;protein_id=YP_402332.1;transl_table=11
NC_007606.1	RefSeq	region	619557	620324	.	-	.	ID=id99;gbkey=mobile_element
NC_007606.1	RefSeq	gene	619572	619949	.	-	.	ID=gene641;Dbxref=GeneID:3799720;Name=insB;Note=SDY0656;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0656
NC_007606.1	RefSeq	CDS	619572	619949	.	-	0	ID=cds563;Parent=gene641;Dbxref=Genbank:YP_402333.1,GeneID:3799720;Name=YP_402333.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402333.1;transl_table=11
NC_007606.1	RefSeq	gene	619994	620269	.	-	.	ID=gene642;Dbxref=GeneID:3799721;Name=insA;Note=SDY0657;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0657
NC_007606.1	RefSeq	CDS	619994	620269	.	-	0	ID=cds564;Parent=gene642;Dbxref=Genbank:YP_402334.1,GeneID:3799721;Name=YP_402334.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402334.1;transl_table=11
NC_007606.1	RefSeq	gene	620710	621993	.	-	.	ID=gene643;Dbxref=GeneID:3799722;Name=gltA;Note=SDY0658;gbkey=Gene;gene=gltA;gene_biotype=protein_coding;locus_tag=SDY_0658
NC_007606.1	RefSeq	CDS	620710	621993	.	-	0	ID=cds565;Parent=gene643;Dbxref=Genbank:YP_402335.1,GeneID:3799722;Name=YP_402335.1;Note=''type II enzyme%3B in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate%3B allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation%3B forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A%3B functions in TCA cycle%2C glyoxylate cycle and respiration%3B enzyme from Helicobacter pylori is not inhibited by NADH'';gbkey=CDS;gene=gltA;product=type II citrate synthase;protein_id=YP_402335.1;transl_table=11
NC_007606.1	RefSeq	gene	622702	623091	.	+	.	ID=gene644;Dbxref=GeneID:3799723;Name=sdhC;Note=SDY0659;gbkey=Gene;gene=sdhC;gene_biotype=protein_coding;locus_tag=SDY_0659
NC_007606.1	RefSeq	CDS	622702	623091	.	+	0	ID=cds566;Parent=gene644;Dbxref=Genbank:YP_402336.1,GeneID:3799723;Name=YP_402336.1;Note=Code: C%3B COG: COG2009;gbkey=CDS;gene=sdhC;product=succinate dehydrogenase cytochrome b556 large membrane subunit;protein_id=YP_402336.1;transl_table=11
NC_007606.1	RefSeq	gene	623085	623432	.	+	.	ID=gene645;Dbxref=GeneID:3799724;Name=sdhD;Note=SDY0660;gbkey=Gene;gene=sdhD;gene_biotype=protein_coding;locus_tag=SDY_0660
NC_007606.1	RefSeq	CDS	623085	623432	.	+	0	ID=cds567;Parent=gene645;Dbxref=Genbank:YP_402337.1,GeneID:3799724;Name=YP_402337.1;Note=Code: C%3B COG: COG2142;gbkey=CDS;gene=sdhD;product=succinate dehydrogenase cytochrome b556 small membrane subunit;protein_id=YP_402337.1;transl_table=11
NC_007606.1	RefSeq	gene	623432	625198	.	+	.	ID=gene646;Dbxref=GeneID:3799725;Name=sdhA;Note=SDY0661;gbkey=Gene;gene=sdhA;gene_biotype=protein_coding;locus_tag=SDY_0661
NC_007606.1	RefSeq	CDS	623432	625198	.	+	0	ID=cds568;Parent=gene646;Dbxref=Genbank:YP_402338.1,GeneID:3799725;Name=YP_402338.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol;gbkey=CDS;gene=sdhA;product=succinate dehydrogenase flavoprotein subunit;protein_id=YP_402338.1;transl_table=11
NC_007606.1	RefSeq	gene	625214	625930	.	+	.	ID=gene647;Dbxref=GeneID:3799726;Name=sdhB;Note=SDY0662;gbkey=Gene;gene=sdhB;gene_biotype=protein_coding;locus_tag=SDY_0662
NC_007606.1	RefSeq	CDS	625214	625930	.	+	0	ID=cds569;Parent=gene647;Dbxref=Genbank:YP_402339.1,GeneID:3799726;Name=YP_402339.1;Note=part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers)%3B SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556%3B SdhC binds ubiquinone%3B oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol%3B the catalytic subunits are similar to fumarate reductase;gbkey=CDS;gene=sdhB;product=succinate dehydrogenase iron-sulfur subunit;protein_id=YP_402339.1;transl_table=11
NC_007606.1	RefSeq	gene	625989	626249	.	+	.	ID=gene648;Dbxref=GeneID:3799727;Name=SDY_0663;Note=SDY0663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0663
NC_007606.1	RefSeq	CDS	625989	626249	.	+	0	ID=cds570;Parent=gene648;Dbxref=Genbank:YP_402340.1,GeneID:3799727;Name=YP_402340.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402340.1;transl_table=11
NC_007606.1	RefSeq	gene	626231	629032	.	+	.	ID=gene649;Dbxref=GeneID:3799728;Name=sucA;Note=SDY0664;gbkey=Gene;gene=sucA;gene_biotype=protein_coding;locus_tag=SDY_0664
NC_007606.1	RefSeq	CDS	626231	629032	.	+	0	ID=cds571;Parent=gene649;Dbxref=Genbank:YP_402341.1,GeneID:3799728;Name=YP_402341.1;Note=SucA%3B E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate%3B SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide;gbkey=CDS;gene=sucA;product=2-oxoglutarate dehydrogenase E1;protein_id=YP_402341.1;transl_table=11
NC_007606.1	RefSeq	gene	629047	630264	.	+	.	ID=gene650;Dbxref=GeneID:3799209;Name=sucB;Note=SDY0665;gbkey=Gene;gene=sucB;gene_biotype=protein_coding;locus_tag=SDY_0665
NC_007606.1	RefSeq	CDS	629047	630264	.	+	0	ID=cds572;Parent=gene650;Dbxref=Genbank:YP_402342.1,GeneID:3799209;Name=YP_402342.1;Note=component of 2-oxoglutarate dehydrogenase complex%3B catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA;gbkey=CDS;gene=sucB;product=dihydrolipoamide succinyltransferase;protein_id=YP_402342.1;transl_table=11
NC_007606.1	RefSeq	gene	630358	631524	.	+	.	ID=gene651;Dbxref=GeneID:3799210;Name=sucC;Note=SDY0666;gbkey=Gene;gene=sucC;gene_biotype=protein_coding;locus_tag=SDY_0666
NC_007606.1	RefSeq	CDS	630358	631524	.	+	0	ID=cds573;Parent=gene651;Dbxref=Genbank:YP_402343.1,GeneID:3799210;Name=YP_402343.1;Note=catalyzes the interconversion of succinyl-CoA and succinate;gbkey=CDS;gene=sucC;product=succinyl-CoA synthetase subunit beta;protein_id=YP_402343.1;transl_table=11
NC_007606.1	RefSeq	gene	631524	632393	.	+	.	ID=gene652;Dbxref=GeneID:3799211;Name=sucD;Note=SDY0667;gbkey=Gene;gene=sucD;gene_biotype=protein_coding;locus_tag=SDY_0667
NC_007606.1	RefSeq	CDS	631524	632393	.	+	0	ID=cds574;Parent=gene652;Dbxref=Genbank:YP_402344.1,GeneID:3799211;Name=YP_402344.1;Note=Catalyzes the only substrate-level phosphorylation in the TCA cycle;gbkey=CDS;gene=sucD;product=succinyl-CoA synthetase subunit alpha;protein_id=YP_402344.1;transl_table=11
NC_007606.1	RefSeq	region	633044	633811	.	+	.	ID=id100;gbkey=mobile_element
NC_007606.1	RefSeq	gene	633099	633374	.	+	.	ID=gene653;Dbxref=GeneID:3799212;Name=insA;Note=SDY0668;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0668
NC_007606.1	RefSeq	CDS	633099	633374	.	+	0	ID=cds575;Parent=gene653;Dbxref=Genbank:YP_402345.1,GeneID:3799212;Name=YP_402345.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402345.1;transl_table=11
NC_007606.1	RefSeq	gene	633419	633796	.	+	.	ID=gene654;Dbxref=GeneID:3799213;Name=insB;Note=SDY0669;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0669
NC_007606.1	RefSeq	CDS	633419	633796	.	+	0	ID=cds576;Parent=gene654;Dbxref=Genbank:YP_402346.1,GeneID:3799213;Name=YP_402346.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402346.1;transl_table=11
NC_007606.1	RefSeq	region	633819	634586	.	+	.	ID=id101;gbkey=mobile_element
NC_007606.1	RefSeq	gene	633874	634149	.	+	.	ID=gene655;Dbxref=GeneID:3799214;Name=insA;Note=SDY0670;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0670
NC_007606.1	RefSeq	CDS	633874	634149	.	+	0	ID=cds577;Parent=gene655;Dbxref=Genbank:YP_402347.1,GeneID:3799214;Name=YP_402347.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402347.1;transl_table=11
NC_007606.1	RefSeq	gene	634194	634571	.	+	.	ID=gene656;Dbxref=GeneID:3799215;Name=insB;Note=SDY0671;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0671
NC_007606.1	RefSeq	CDS	634194	634571	.	+	0	ID=cds578;Parent=gene656;Dbxref=Genbank:YP_402348.1,GeneID:3799215;Name=YP_402348.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402348.1;transl_table=11
NC_007606.1	RefSeq	gene	634675	636045	.	-	.	ID=gene657;Dbxref=GeneID:3799216;Name=SDY_0672;Note=SDY0672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0672
NC_007606.1	RefSeq	CDS	634675	636045	.	-	0	ID=cds579;Parent=gene657;Dbxref=Genbank:YP_402349.1,GeneID:3799216;Name=YP_402349.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402349.1;transl_table=11
NC_007606.1	RefSeq	gene	636049	637290	.	-	.	ID=gene658;Dbxref=GeneID:3799217;Name=SDY_0673;Note=SDY0673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0673
NC_007606.1	RefSeq	CDS	636049	637290	.	-	0	ID=cds580;Parent=gene658;Dbxref=Genbank:YP_402350.1,GeneID:3799217;Name=YP_402350.1;Note=Code: E%3B COG: COG3799;gbkey=CDS;product=methylaspartate ammonia-lyase;protein_id=YP_402350.1;transl_table=11
NC_007606.1	RefSeq	gene	637290	638654	.	-	.	ID=gene659;Dbxref=GeneID:3799218;Name=SDY_0674;Note=SDY0674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0674
NC_007606.1	RefSeq	CDS	637290	638654	.	-	0	ID=cds581;Parent=gene659;Dbxref=Genbank:YP_402351.1,GeneID:3799218;Name=YP_402351.1;Note=Code: E%3B COG: COG4865;gbkey=CDS;product=glutamate mutase subunit E;protein_id=YP_402351.1;transl_table=11
NC_007606.1	RefSeq	gene	638673	640061	.	-	.	ID=gene660;Dbxref=GeneID:3799219;Name=SDY_0675;Note=SDY0675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0675
NC_007606.1	RefSeq	CDS	638673	640061	.	-	0	ID=cds582;Parent=gene660;Dbxref=Genbank:YP_402352.1,GeneID:3799219;Name=YP_402352.1;gbkey=CDS;product=glutamate mutase L;protein_id=YP_402352.1;transl_table=11
NC_007606.1	RefSeq	gene	640061	640573	.	-	.	ID=gene661;Dbxref=GeneID:3799220;Name=SDY_0676;Note=SDY0676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0676
NC_007606.1	RefSeq	CDS	640061	640573	.	-	0	ID=cds583;Parent=gene661;Dbxref=Genbank:YP_402353.1,GeneID:3799220;Name=YP_402353.1;Note=converts methylaspartate to L-glutamate;gbkey=CDS;product=methylaspartate mutase subunit S;protein_id=YP_402353.1;transl_table=11
NC_007606.1	RefSeq	region	641225	641989	.	+	.	ID=id102;gbkey=mobile_element
NC_007606.1	RefSeq	gene	641282	641554	.	+	.	ID=gene662;Dbxref=GeneID:18262970;Name=SDY_0676a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0676a
NC_007606.1	RefSeq	CDS	641282	641554	.	+	0	ID=cds584;Parent=gene662;Dbxref=Genbank:YP_009000656.1,GeneID:18262970;Name=YP_009000656.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000656.1;transl_table=11
NC_007606.1	RefSeq	gene	642335	643163	.	-	.	ID=gene663;Dbxref=GeneID:3799223;Name=SDY_0679;Note=SDY0679;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0679;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	644083	645654	.	+	.	ID=gene664;Dbxref=GeneID:3799224;Name=cydA;Note=SDY0680;gbkey=Gene;gene=cydA;gene_biotype=protein_coding;locus_tag=SDY_0680
NC_007606.1	RefSeq	CDS	644083	645654	.	+	0	ID=cds585;Parent=gene664;Dbxref=Genbank:YP_402357.1,GeneID:3799224;Name=YP_402357.1;Note=Code: C%3B COG: COG1271;gbkey=CDS;gene=cydA;product=cytochrome d terminal oxidase polypeptide subunit I;protein_id=YP_402357.1;transl_table=11
NC_007606.1	RefSeq	gene	645670	646809	.	+	.	ID=gene665;Dbxref=GeneID:3799225;Name=cydB;Note=SDY0681;gbkey=Gene;gene=cydB;gene_biotype=protein_coding;locus_tag=SDY_0681
NC_007606.1	RefSeq	CDS	645670	646809	.	+	0	ID=cds586;Parent=gene665;Dbxref=Genbank:YP_402358.1,GeneID:3799225;Name=YP_402358.1;Note=Code: C%3B COG: COG1294;gbkey=CDS;gene=cydB;product=cytochrome d terminal oxidase polypeptide subunit II;protein_id=YP_402358.1;transl_table=11
NC_007606.1	RefSeq	gene	646824	646937	.	+	.	ID=gene666;Dbxref=GeneID:3799226;Name=ybgT;Note=SDY0682;gbkey=Gene;gene=ybgT;gene_biotype=protein_coding;locus_tag=SDY_0682
NC_007606.1	RefSeq	CDS	646824	646937	.	+	0	ID=cds587;Parent=gene666;Dbxref=Genbank:YP_402359.1,GeneID:3799226;Name=YP_402359.1;Note=Code: S%3B COG: COG4890;gbkey=CDS;gene=ybgT;product=outer membrane lipoprotein;protein_id=YP_402359.1;transl_table=11
NC_007606.1	RefSeq	gene	646937	647230	.	+	.	ID=gene667;Dbxref=GeneID:3799227;Name=ybgE;Note=SDY0683;gbkey=Gene;gene=ybgE;gene_biotype=protein_coding;locus_tag=SDY_0683
NC_007606.1	RefSeq	CDS	646937	647230	.	+	0	ID=cds588;Parent=gene667;Dbxref=Genbank:YP_402360.1,GeneID:3799227;Name=YP_402360.1;Note=Code: S%3B COG: COG3790;gbkey=CDS;gene=ybgE;product=hypothetical protein;protein_id=YP_402360.1;transl_table=11
NC_007606.1	RefSeq	gene	647380	647784	.	+	.	ID=gene668;Dbxref=GeneID:3796634;Name=ybgC;Note=SDY0684;gbkey=Gene;gene=ybgC;gene_biotype=protein_coding;locus_tag=SDY_0684
NC_007606.1	RefSeq	CDS	647380	647784	.	+	0	ID=cds589;Parent=gene668;Dbxref=Genbank:YP_402361.1,GeneID:3796634;Name=YP_402361.1;Note=catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters%3B physiological role remains unknown%3B involved in phospholipid metabolism%3B part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components;gbkey=CDS;gene=ybgC;product=acyl-CoA thioester hydrolase;protein_id=YP_402361.1;transl_table=11
NC_007606.1	RefSeq	gene	647781	648473	.	+	.	ID=gene669;Dbxref=GeneID:3796635;Name=tolQ;Note=SDY0685;gbkey=Gene;gene=tolQ;gene_biotype=protein_coding;locus_tag=SDY_0685
NC_007606.1	RefSeq	CDS	647781	648473	.	+	0	ID=cds590;Parent=gene669;Dbxref=Genbank:YP_402362.1,GeneID:3796635;Name=YP_402362.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;gene=tolQ;product=colicin uptake protein TolQ;protein_id=YP_402362.1;transl_table=11
NC_007606.1	RefSeq	gene	648477	648905	.	+	.	ID=gene670;Dbxref=GeneID:3796636;Name=tolR;Note=SDY0686;gbkey=Gene;gene=tolR;gene_biotype=protein_coding;locus_tag=SDY_0686
NC_007606.1	RefSeq	CDS	648477	648905	.	+	0	ID=cds591;Parent=gene670;Dbxref=Genbank:YP_402363.1,GeneID:3796636;Name=YP_402363.1;Note=membrane spanning protein in TolA-TolQ-TolR complex%3B involved in the tonB-independent uptake of group A colicins;gbkey=CDS;gene=tolR;product=colicin uptake protein TolR;protein_id=YP_402363.1;transl_table=11
NC_007606.1	RefSeq	gene	648970	650235	.	+	.	ID=gene671;Dbxref=GeneID:3796637;Name=tolA;Note=SDY0687;gbkey=Gene;gene=tolA;gene_biotype=protein_coding;locus_tag=SDY_0687
NC_007606.1	RefSeq	CDS	648970	650235	.	+	0	ID=cds592;Parent=gene671;Dbxref=Genbank:YP_402364.1,GeneID:3796637;Name=YP_402364.1;Note=''inner membrane component of 7 member Tol-Pal envelope-spanning complex%3B involved in maintaining cell envelope integrity%3B utilized by colicins and filamentous phages for import%3B interacts with TolB%2C Pal%2C and through TolB to various outer membrane porins'';gbkey=CDS;gene=tolA;product=cell envelope integrity inner membrane protein TolA;protein_id=YP_402364.1;transl_table=11
NC_007606.1	RefSeq	gene	650368	651660	.	+	.	ID=gene672;Dbxref=GeneID:3796638;Name=tolB;Note=SDY0688;gbkey=Gene;gene=tolB;gene_biotype=protein_coding;locus_tag=SDY_0688
NC_007606.1	RefSeq	CDS	650368	651660	.	+	0	ID=cds593;Parent=gene672;Dbxref=Genbank:YP_402365.1,GeneID:3796638;Name=YP_402365.1;Note=forms dimers%3B may be involved in cell envelope integrity%3B interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA;gbkey=CDS;gene=tolB;product=translocation protein TolB;protein_id=YP_402365.1;transl_table=11
NC_007606.1	RefSeq	gene	651695	652216	.	+	.	ID=gene673;Dbxref=GeneID:3796639;Name=pal;Note=SDY0689;gbkey=Gene;gene=pal;gene_biotype=protein_coding;locus_tag=SDY_0689
NC_007606.1	RefSeq	CDS	651695	652216	.	+	0	ID=cds594;Parent=gene673;Dbxref=Genbank:YP_402366.1,GeneID:3796639;Name=YP_402366.1;Note=Code: M%3B COG: COG2885;gbkey=CDS;gene=pal;product=peptidoglycan-associated outer membrane lipoprotein;protein_id=YP_402366.1;transl_table=11
NC_007606.1	RefSeq	gene	652226	653017	.	+	.	ID=gene674;Dbxref=GeneID:3796640;Name=ybgF;Note=SDY0690;gbkey=Gene;gene=ybgF;gene_biotype=protein_coding;locus_tag=SDY_0690
NC_007606.1	RefSeq	CDS	652226	653017	.	+	0	ID=cds595;Parent=gene674;Dbxref=Genbank:YP_402367.1,GeneID:3796640;Name=YP_402367.1;Note=periplasmic protein that interacts with TolA%3B the tol-pal system is probably involved in maintaining cell envelope integrity;gbkey=CDS;gene=ybgF;product=tol-pal system protein YbgF;protein_id=YP_402367.1;transl_table=11
NC_007606.1	RefSeq	gene	653182	653257	.	+	.	ID=gene675;Dbxref=GeneID:3796641;Name=SDY_0691;Note=SDY0691;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0691
NC_007606.1	RefSeq	tRNA	653182	653257	.	+	.	ID=rna19;Parent=gene675;Dbxref=GeneID:3796641;codons=42;gbkey=tRNA;product=tRNA-Lys
NC_007606.1	RefSeq	exon	653182	653257	.	+	.	ID=id103;Parent=rna19;Dbxref=GeneID:3796641;codons=42;gbkey=tRNA;product=tRNA-Lys
NC_007606.1	RefSeq	gene	653404	653479	.	+	.	ID=gene676;Dbxref=GeneID:3796642;Name=SDY_0692;Note=SDY0692;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0692
NC_007606.1	RefSeq	tRNA	653404	653479	.	+	.	ID=rna20;Parent=gene676;Dbxref=GeneID:3796642;codons=42;gbkey=tRNA;product=tRNA-Lys
NC_007606.1	RefSeq	exon	653404	653479	.	+	.	ID=id104;Parent=rna20;Dbxref=GeneID:3796642;codons=42;gbkey=tRNA;product=tRNA-Lys
NC_007606.1	RefSeq	gene	653513	653588	.	+	.	ID=gene677;Dbxref=GeneID:3796643;Name=SDY_0693;Note=SDY0693;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0693
NC_007606.1	RefSeq	tRNA	653513	653588	.	+	.	ID=rna21;Parent=gene677;Dbxref=GeneID:3796643;codons=42;gbkey=tRNA;product=tRNA-Lys
NC_007606.1	RefSeq	exon	653513	653588	.	+	.	ID=id105;Parent=rna21;Dbxref=GeneID:3796643;codons=42;gbkey=tRNA;product=tRNA-Lys
NC_007606.1	RefSeq	gene	653866	654909	.	+	.	ID=gene678;Dbxref=GeneID:3796644;Name=nadA;Note=SDY0694;gbkey=Gene;gene=nadA;gene_biotype=protein_coding;locus_tag=SDY_0694
NC_007606.1	RefSeq	CDS	653866	654909	.	+	0	ID=cds596;Parent=gene678;Dbxref=Genbank:YP_402368.1,GeneID:3796644;Name=YP_402368.1;Note=3 different subfamilies%3B catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate;gbkey=CDS;gene=nadA;product=quinolinate synthetase;protein_id=YP_402368.1;transl_table=11
NC_007606.1	RefSeq	gene	654947	655666	.	+	.	ID=gene679;Dbxref=GeneID:3796645;Name=pnuC;Note=SDY0695;gbkey=Gene;gene=pnuC;gene_biotype=protein_coding;locus_tag=SDY_0695
NC_007606.1	RefSeq	CDS	654947	655666	.	+	0	ID=cds597;Parent=gene679;Dbxref=Genbank:YP_402369.1,GeneID:3796645;Name=YP_402369.1;Note=Code: H%3B COG: COG3201;gbkey=CDS;gene=pnuC;product=nicotinamide mononucleotide transporter PnuC;protein_id=YP_402369.1;transl_table=11
NC_007606.1	RefSeq	gene	655663	656604	.	-	.	ID=gene680;Dbxref=GeneID:3796646;Name=ybgR;Note=SDY0696;gbkey=Gene;gene=ybgR;gene_biotype=protein_coding;locus_tag=SDY_0696
NC_007606.1	RefSeq	CDS	655663	656604	.	-	0	ID=cds598;Parent=gene680;Dbxref=Genbank:YP_402370.1,GeneID:3796646;Name=YP_402370.1;Note=involved in zinc efflux across the cytoplasmic membrane;gbkey=CDS;gene=ybgR;product=zinc transporter ZitB;protein_id=YP_402370.1;transl_table=11
NC_007606.1	RefSeq	gene	656718	657098	.	-	.	ID=gene681;Dbxref=GeneID:3796647;Name=SDY_0697;Note=SDY0697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0697
NC_007606.1	RefSeq	CDS	656718	657098	.	-	0	ID=cds599;Parent=gene681;Dbxref=Genbank:YP_402371.1,GeneID:3796647;Name=YP_402371.1;gbkey=CDS;product=homeobox protein;protein_id=YP_402371.1;transl_table=11
NC_007606.1	RefSeq	region	657303	658069	.	+	.	ID=id106;gbkey=mobile_element
NC_007606.1	RefSeq	gene	657364	657636	.	+	.	ID=gene682;Dbxref=GeneID:18262971;Name=SDY_0699a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0699a
NC_007606.1	RefSeq	CDS	657364	657636	.	+	0	ID=cds600;Parent=gene682;Dbxref=Genbank:YP_009000657.1,GeneID:18262971;Name=YP_009000657.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000657.1;transl_table=11
NC_007606.1	RefSeq	gene	658187	659239	.	+	.	ID=gene683;Dbxref=GeneID:3799479;Name=aroG;Note=SDY0701;gbkey=Gene;gene=aroG;gene_biotype=protein_coding;locus_tag=SDY_0701
NC_007606.1	RefSeq	CDS	658187	659239	.	+	0	ID=cds601;Parent=gene683;Dbxref=Genbank:YP_402375.1,GeneID:3799479;Name=YP_402375.1;Note=''catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C phenylalanine sensitive'';gbkey=CDS;gene=aroG;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_402375.1;transl_table=11
NC_007606.1	RefSeq	gene	659398	660150	.	-	.	ID=gene684;Dbxref=GeneID:3799480;Name=gpmA;Note=SDY0702;gbkey=Gene;gene=gpmA;gene_biotype=protein_coding;locus_tag=SDY_0702
NC_007606.1	RefSeq	CDS	659398	660150	.	-	0	ID=cds602;Parent=gene684;Dbxref=Genbank:YP_402376.1,GeneID:3799480;Name=YP_402376.1;Note=Code: G%3B COG: COG0588;gbkey=CDS;gene=gpmA;product=phosphoglyceromutase;protein_id=YP_402376.1;transl_table=11
NC_007606.1	RefSeq	gene	660355	661395	.	-	.	ID=gene685;Dbxref=GeneID:3799481;Name=galM;Note=SDY0703;gbkey=Gene;gene=galM;gene_biotype=protein_coding;locus_tag=SDY_0703
NC_007606.1	RefSeq	CDS	660355	661395	.	-	0	ID=cds603;Parent=gene685;Dbxref=Genbank:YP_402377.1,GeneID:3799481;Name=YP_402377.1;Note=''catalyzes the conversion of alpha-aldose to the beta-anomer%3B active on D-glucose%2C L-arabinose%2C D-xylose%2C D-galactose%2C maltose and lactose%3B links the metabolism of lactose and galactose'';gbkey=CDS;gene=galM;product=aldose 1-epimerase;protein_id=YP_402377.1;transl_table=11
NC_007606.1	RefSeq	gene	661389	662537	.	-	.	ID=gene686;Dbxref=GeneID:3799482;Name=galK;Note=SDY0704;gbkey=Gene;gene=galK;gene_biotype=protein_coding;locus_tag=SDY_0704
NC_007606.1	RefSeq	CDS	661389	662537	.	-	0	ID=cds604;Parent=gene686;Dbxref=Genbank:YP_402378.1,GeneID:3799482;Name=YP_402378.1;Note=catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism;gbkey=CDS;gene=galK;product=galactokinase;protein_id=YP_402378.1;transl_table=11
NC_007606.1	RefSeq	gene	662541	663587	.	-	.	ID=gene687;Dbxref=GeneID:3799483;Name=galT;Note=SDY0705;gbkey=Gene;gene=galT;gene_biotype=protein_coding;locus_tag=SDY_0705
NC_007606.1	RefSeq	CDS	662541	663587	.	-	0	ID=cds605;Parent=gene687;Dbxref=Genbank:YP_402379.1,GeneID:3799483;Name=YP_402379.1;Note=catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P;gbkey=CDS;gene=galT;product=galactose-1-phosphate uridylyltransferase;protein_id=YP_402379.1;transl_table=11
NC_007606.1	RefSeq	gene	663597	664613	.	-	.	ID=gene688;Dbxref=GeneID:3799484;Name=galE;Note=SDY0706;gbkey=Gene;gene=galE;gene_biotype=protein_coding;locus_tag=SDY_0706
NC_007606.1	RefSeq	CDS	663597	664613	.	-	0	ID=cds606;Parent=gene688;Dbxref=Genbank:YP_402380.1,GeneID:3799484;Name=YP_402380.1;Note=Code: M%3B COG: COG1087;gbkey=CDS;gene=galE;product=UDP-galactose-4-epimerase;protein_id=YP_402380.1;transl_table=11
NC_007606.1	RefSeq	gene	664875	666347	.	-	.	ID=gene689;Dbxref=GeneID:3799485;Name=modF;Note=SDY0707;gbkey=Gene;gene=modF;gene_biotype=protein_coding;locus_tag=SDY_0707
NC_007606.1	RefSeq	CDS	664875	666347	.	-	0	ID=cds607;Parent=gene689;Dbxref=Genbank:YP_402381.1,GeneID:3799485;Name=YP_402381.1;Note=contains 2 ATP-binding cassettes%3B involved in the transport of molybdenum;gbkey=CDS;gene=modF;product=molybdenum transport ATP-binding protein ModF;protein_id=YP_402381.1;transl_table=11
NC_007606.1	RefSeq	gene	666415	667203	.	-	.	ID=gene690;Dbxref=GeneID:3799486;Name=modE;Note=SDY0708;gbkey=Gene;gene=modE;gene_biotype=protein_coding;locus_tag=SDY_0708
NC_007606.1	RefSeq	CDS	666415	667203	.	-	0	ID=cds608;Parent=gene690;Dbxref=Genbank:YP_402382.1,GeneID:3799486;Name=YP_402382.1;Note=represses the modABCD operon and activates the moaABCD and napFDAGHBC operons;gbkey=CDS;gene=modE;product=DNA-binding transcriptional regulator ModE;protein_id=YP_402382.1;transl_table=11
NC_007606.1	RefSeq	gene	667332	667481	.	+	.	ID=gene691;Dbxref=GeneID:3799487;Name=SDY_0709;Note=SDY0709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0709
NC_007606.1	RefSeq	CDS	667332	667481	.	+	0	ID=cds609;Parent=gene691;Dbxref=Genbank:YP_402383.1,GeneID:3799487;Name=YP_402383.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402383.1;transl_table=11
NC_007606.1	RefSeq	gene	667648	668421	.	+	.	ID=gene692;Dbxref=GeneID:3799488;Name=modA;Note=SDY0710;gbkey=Gene;gene=modA;gene_biotype=protein_coding;locus_tag=SDY_0710
NC_007606.1	RefSeq	CDS	667648	668421	.	+	0	ID=cds610;Parent=gene692;Dbxref=Genbank:YP_402384.1,GeneID:3799488;Name=YP_402384.1;Note=with ModCB is involved in the high-affinity transport of molybdate;gbkey=CDS;gene=modA;product=molybdate ABC transporter substrate-binding protein;protein_id=YP_402384.1;transl_table=11
NC_007606.1	RefSeq	gene	668421	669110	.	+	.	ID=gene693;Dbxref=GeneID:3799489;Name=modB;Note=SDY0711;gbkey=Gene;gene=modB;gene_biotype=protein_coding;gene_synonym=chlJ;locus_tag=SDY_0711
NC_007606.1	RefSeq	CDS	668421	669110	.	+	0	ID=cds611;Parent=gene693;Dbxref=Genbank:YP_402385.1,GeneID:3799489;Name=YP_402385.1;Note=part of ModCBA molybdate transporter%3B member of ABC superfamily%3B inner membrane component%3B regulated by repressor protein ModE;gbkey=CDS;gene=modB;product=molybdate ABC transporter permease;protein_id=YP_402385.1;transl_table=11
NC_007606.1	RefSeq	gene	669113	670171	.	+	.	ID=gene694;Dbxref=GeneID:3799490;Name=modC;Note=SDY0712;gbkey=Gene;gene=modC;gene_biotype=protein_coding;locus_tag=SDY_0712
NC_007606.1	RefSeq	CDS	669113	670171	.	+	0	ID=cds612;Parent=gene694;Dbxref=Genbank:YP_402386.1,GeneID:3799490;Name=YP_402386.1;Note=Part of the ABC transporter complex modABC involved in molybdenum import;gbkey=CDS;gene=modC;product=molybdate ABC transporter ATP-binding protein;protein_id=YP_402386.1;transl_table=11
NC_007606.1	RefSeq	gene	670172	670990	.	-	.	ID=gene695;Dbxref=GeneID:3799491;Name=ybhA;Note=SDY0713%3B contains in-frame stop codon%3B original product:  phosphatase;gbkey=Gene;gene=ybhA;gene_biotype=pseudogene;locus_tag=SDY_0713;pseudo=true
NC_007606.1	RefSeq	gene	671494	672439	.	-	.	ID=gene696;Dbxref=GeneID:3799492;Name=SDY_0714;Note=SDY0714;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0714;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	671683	672938	.	-	.	ID=id107;gbkey=mobile_element
NC_007606.1	RefSeq	gene	672580	672882	.	-	.	ID=gene697;Dbxref=GeneID:3799493;Name=SDY_0715;Note=SDY0715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0715
NC_007606.1	RefSeq	CDS	672580	672882	.	-	0	ID=cds613;Parent=gene697;Dbxref=Genbank:YP_402388.1,GeneID:3799493;Name=YP_402388.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402388.1;transl_table=11
NC_007606.1	RefSeq	region	672939	673704	.	-	.	ID=id108;gbkey=mobile_element
NC_007606.1	RefSeq	gene	672953	673348	.	-	.	ID=gene698;Dbxref=GeneID:3799494;Name=SDY_0716;Note=SDY0716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0716
NC_007606.1	RefSeq	CDS	672953	673348	.	-	0	ID=cds614;Parent=gene698;Dbxref=Genbank:YP_402389.1,GeneID:3799494;Name=YP_402389.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402389.1;transl_table=11
NC_007606.1	RefSeq	gene	673375	673647	.	-	.	ID=gene699;Dbxref=GeneID:18262972;Name=SDY_0718a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0718a
NC_007606.1	RefSeq	CDS	673375	673647	.	-	0	ID=cds615;Parent=gene699;Dbxref=Genbank:YP_009000658.1,GeneID:18262972;Name=YP_009000658.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000658.1;transl_table=11
NC_007606.1	RefSeq	region	673721	673939	.	-	.	ID=id109;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	673938	675187	.	-	.	ID=id110;gbkey=mobile_element
NC_007606.1	RefSeq	gene	674813	675115	.	-	.	ID=gene700;Dbxref=GeneID:3799131;Name=SDY_0720;Note=SDY0720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0720
NC_007606.1	RefSeq	CDS	674813	675115	.	-	0	ID=cds616;Parent=gene700;Dbxref=Genbank:YP_402393.1,GeneID:3799131;Name=YP_402393.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_402393.1;transl_table=11
NC_007606.1	RefSeq	region	675188	676074	.	-	.	ID=id111;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	675741	676100	.	-	.	ID=gene701;Dbxref=GeneID:3799133;Name=SDY_0722;Note=SDY0722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0722
NC_007606.1	RefSeq	CDS	675741	676100	.	-	0	ID=cds617;Parent=gene701;Dbxref=Genbank:YP_402395.1,GeneID:3799133;Name=YP_402395.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_402395.1;transl_table=11
NC_007606.1	RefSeq	region	676075	677340	.	+	.	ID=id112;gbkey=mobile_element
NC_007606.1	RefSeq	gene	676139	676441	.	+	.	ID=gene702;Dbxref=GeneID:3799134;Name=SDY_0723;Note=SDY0723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0723
NC_007606.1	RefSeq	CDS	676139	676441	.	+	0	ID=cds618;Parent=gene702;Dbxref=Genbank:YP_402396.1,GeneID:3799134;Name=YP_402396.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402396.1;transl_table=11
NC_007606.1	RefSeq	gene	676582	677478	.	+	.	ID=gene703;Dbxref=GeneID:3799135;Name=SDY_0724;Note=SDY0724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0724
NC_007606.1	RefSeq	CDS	676582	677478	.	+	0	ID=cds619;Parent=gene703;Dbxref=Genbank:YP_402397.1,GeneID:3799135;Name=YP_402397.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402397.1;transl_table=11
NC_007606.1	RefSeq	gene	678909	679673	.	+	.	ID=gene704;Dbxref=GeneID:3799136;Name=SDY_0725;Note=SDY0725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0725
NC_007606.1	RefSeq	CDS	678909	679673	.	+	0	ID=cds620;Parent=gene704;Dbxref=Genbank:YP_402398.1,GeneID:3799136;Name=YP_402398.1;gbkey=CDS;product=bacteriophage protein;protein_id=YP_402398.1;transl_table=11
NC_007606.1	RefSeq	gene	679597	680415	.	+	.	ID=gene705;Dbxref=GeneID:3799137;Name=SDY_0726;Note=SDY0726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0726
NC_007606.1	RefSeq	CDS	679597	680415	.	+	0	ID=cds621;Parent=gene705;Dbxref=Genbank:YP_402399.1,GeneID:3799137;Name=YP_402399.1;Note=Code: R%3B COG: COG1783;gbkey=CDS;product=bacteriophage protein;protein_id=YP_402399.1;transl_table=11
NC_007606.1	RefSeq	gene	680338	681171	.	-	.	ID=gene706;Dbxref=GeneID:3799138;Name=SDY_0727;Note=SDY0727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0727
NC_007606.1	RefSeq	CDS	680338	681171	.	-	0	ID=cds622;Parent=gene706;Dbxref=Genbank:YP_402400.1,GeneID:3799138;Name=YP_402400.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402400.1;transl_table=11
NC_007606.1	RefSeq	region	680413	681678	.	-	.	ID=id113;gbkey=mobile_element
NC_007606.1	RefSeq	gene	681312	681614	.	-	.	ID=gene707;Dbxref=GeneID:3799139;Name=SDY_0728;Note=SDY0728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0728
NC_007606.1	RefSeq	CDS	681312	681614	.	-	0	ID=cds623;Parent=gene707;Dbxref=Genbank:YP_402401.1,GeneID:3799139;Name=YP_402401.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402401.1;transl_table=11
NC_007606.1	RefSeq	region	681700	683030	.	-	.	ID=id114;gbkey=mobile_element
NC_007606.1	RefSeq	gene	681711	682616	.	-	.	ID=gene708;Dbxref=GeneID:3799140;Name=SDY_0729;Note=SDY0729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0729
NC_007606.1	RefSeq	CDS	681711	682616	.	-	0	ID=cds624;Parent=gene708;Dbxref=Genbank:YP_402402.2,GeneID:3799140;Name=YP_402402.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_402402.2;transl_table=11
NC_007606.1	RefSeq	gene	682574	682939	.	-	.	ID=gene709;Dbxref=GeneID:3799141;Name=SDY_0730;Note=SDY0730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0730
NC_007606.1	RefSeq	CDS	682574	682939	.	-	0	ID=cds625;Parent=gene709;Dbxref=Genbank:YP_402403.1,GeneID:3799141;Name=YP_402403.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_402403.1;transl_table=11
NC_007606.1	RefSeq	gene	683003	683404	.	+	.	ID=gene710;Dbxref=GeneID:3799142;Name=SDY_0731;Note=SDY0731;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0731
NC_007606.1	RefSeq	CDS	683003	683404	.	+	0	ID=cds626;Parent=gene710;Dbxref=Genbank:YP_402404.1,GeneID:3799142;Name=YP_402404.1;gbkey=CDS;product=bacteriophage protein;protein_id=YP_402404.1;transl_table=11
NC_007606.1	RefSeq	gene	683625	683945	.	+	.	ID=gene711;Dbxref=GeneID:3799144;Name=SDY_0733;Note=SDY0733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0733
NC_007606.1	RefSeq	CDS	683625	683945	.	+	0	ID=cds627;Parent=gene711;Dbxref=Genbank:YP_402406.1,GeneID:3799144;Name=YP_402406.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402406.1;transl_table=11
NC_007606.1	RefSeq	region	683941	684708	.	+	.	ID=id115;gbkey=mobile_element
NC_007606.1	RefSeq	gene	683996	684271	.	+	.	ID=gene712;Dbxref=GeneID:3799145;Name=insA;Note=SDY0734;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0734
NC_007606.1	RefSeq	CDS	683996	684271	.	+	0	ID=cds628;Parent=gene712;Dbxref=Genbank:YP_402407.1,GeneID:3799145;Name=YP_402407.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402407.1;transl_table=11
NC_007606.1	RefSeq	gene	684316	684693	.	+	.	ID=gene713;Dbxref=GeneID:3799146;Name=insB;Note=SDY0735;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0735
NC_007606.1	RefSeq	CDS	684316	684693	.	+	0	ID=cds629;Parent=gene713;Dbxref=Genbank:YP_402408.1,GeneID:3799146;Name=YP_402408.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402408.1;transl_table=11
NC_007606.1	RefSeq	gene	684954	686081	.	-	.	ID=gene714;Dbxref=GeneID:3799147;Name=rumB;Note=SDY0736;gbkey=Gene;gene=rumB;gene_biotype=protein_coding;locus_tag=SDY_0736
NC_007606.1	RefSeq	CDS	684954	686081	.	-	0	ID=cds630;Parent=gene714;Dbxref=Genbank:YP_402409.1,GeneID:3799147;Name=YP_402409.1;Note=RNA uridine methyltransferase B%3B catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA;gbkey=CDS;gene=rumB;product=23S rRNA methyluridine methyltransferase;protein_id=YP_402409.1;transl_table=11
NC_007606.1	RefSeq	gene	686122	686610	.	-	.	ID=gene715;Dbxref=GeneID:3799148;Name=ybjO;Note=SDY0737;gbkey=Gene;gene=ybjO;gene_biotype=protein_coding;locus_tag=SDY_0737
NC_007606.1	RefSeq	CDS	686122	686610	.	-	0	ID=cds631;Parent=gene715;Dbxref=Genbank:YP_402410.1,GeneID:3799148;Name=YP_402410.1;gbkey=CDS;gene=ybjO;product=hypothetical protein;protein_id=YP_402410.1;transl_table=11
NC_007606.1	RefSeq	gene	686671	687516	.	-	.	ID=gene716;Dbxref=GeneID:3799149;Name=potI;Note=SDY0738;gbkey=Gene;gene=potI;gene_biotype=protein_coding;locus_tag=SDY_0738
NC_007606.1	RefSeq	CDS	686671	687516	.	-	0	ID=cds632;Parent=gene716;Dbxref=Genbank:YP_402411.1,GeneID:3799149;Name=YP_402411.1;Note=Code: E%3B COG: COG1177;gbkey=CDS;gene=potI;product=putrescine ABC transporter membrane protein;protein_id=YP_402411.1;transl_table=11
NC_007606.1	RefSeq	gene	687513	688466	.	-	.	ID=gene717;Dbxref=GeneID:3799284;Name=potH;Note=SDY0739;gbkey=Gene;gene=potH;gene_biotype=protein_coding;locus_tag=SDY_0739
NC_007606.1	RefSeq	CDS	687513	688466	.	-	0	ID=cds633;Parent=gene717;Dbxref=Genbank:YP_402412.1,GeneID:3799284;Name=YP_402412.1;Note=Code: E%3B COG: COG1176;gbkey=CDS;gene=potH;product=putrescine ABC transporter membrane protein;protein_id=YP_402412.1;transl_table=11
NC_007606.1	RefSeq	gene	688476	689609	.	-	.	ID=gene718;Dbxref=GeneID:3799285;Name=potG;Note=SDY0740;gbkey=Gene;gene=potG;gene_biotype=protein_coding;locus_tag=SDY_0740
NC_007606.1	RefSeq	CDS	688476	689609	.	-	0	ID=cds634;Parent=gene718;Dbxref=Genbank:YP_402413.1,GeneID:3799285;Name=YP_402413.1;Note=part of the PotFGHI ATP-dependent putrescine transporter;gbkey=CDS;gene=potG;product=putrescine ABC transporter ATP-binding protein;protein_id=YP_402413.1;transl_table=11
NC_007606.1	RefSeq	gene	689704	690816	.	-	.	ID=gene719;Dbxref=GeneID:3799286;Name=potF;Note=SDY0741;gbkey=Gene;gene=potF;gene_biotype=protein_coding;locus_tag=SDY_0741
NC_007606.1	RefSeq	CDS	689704	690816	.	-	0	ID=cds635;Parent=gene719;Dbxref=Genbank:YP_402414.1,GeneID:3799286;Name=YP_402414.1;Note=Code: E%3B COG: COG0687;gbkey=CDS;gene=potF;product=putrescine ABC transporter substrate-binding protein;protein_id=YP_402414.1;transl_table=11
NC_007606.1	RefSeq	gene	691167	691643	.	-	.	ID=gene720;Dbxref=GeneID:3799287;Name=ybjN;Note=SDY0742;gbkey=Gene;gene=ybjN;gene_biotype=protein_coding;locus_tag=SDY_0742
NC_007606.1	RefSeq	CDS	691167	691643	.	-	0	ID=cds636;Parent=gene720;Dbxref=Genbank:YP_402415.1,GeneID:3799287;Name=YP_402415.1;gbkey=CDS;gene=ybjN;product=sensory transduction regulator;protein_id=YP_402415.1;transl_table=11
NC_007606.1	RefSeq	gene	691731	692633	.	-	.	ID=gene721;Dbxref=GeneID:3799288;Name=rimK;Note=SDY0743;gbkey=Gene;gene=rimK;gene_biotype=protein_coding;locus_tag=SDY_0743
NC_007606.1	RefSeq	CDS	691731	692633	.	-	0	ID=cds637;Parent=gene721;Dbxref=Genbank:YP_402416.1,GeneID:3799288;Name=YP_402416.1;Note=responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6;gbkey=CDS;gene=rimK;product=ribosomal protein S6 modification protein;protein_id=YP_402416.1;transl_table=11
NC_007606.1	RefSeq	gene	692694	693416	.	-	.	ID=gene722;Dbxref=GeneID:3799289;Name=mdaA;Note=SDY0744;gbkey=Gene;gene=mdaA;gene_biotype=protein_coding;locus_tag=SDY_0744
NC_007606.1	RefSeq	CDS	692694	693416	.	-	0	ID=cds638;Parent=gene722;Dbxref=Genbank:YP_402417.1,GeneID:3799289;Name=YP_402417.1;Note=NADPH-dependent%3B oxygen-insensitive%3B catalyzes the reduction of nitroaromatic compounds;gbkey=CDS;gene=mdaA;product=nitroreductase A;protein_id=YP_402417.1;transl_table=11
NC_007606.1	RefSeq	gene	693400	693687	.	-	.	ID=gene723;Dbxref=GeneID:3799290;Name=ybjC;Note=SDY0745;gbkey=Gene;gene=ybjC;gene_biotype=protein_coding;locus_tag=SDY_0745
NC_007606.1	RefSeq	CDS	693400	693687	.	-	0	ID=cds639;Parent=gene723;Dbxref=Genbank:YP_402418.1,GeneID:3799290;Name=YP_402418.1;Note=YbjC%3B located in the same operon as the nfsA gene%3B member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress%3B induced by paraquat%3B regulated by SoxS%3B unknown function;gbkey=CDS;gene=ybjC;product=hypothetical protein;protein_id=YP_402418.1;transl_table=11
NC_007606.1	RefSeq	gene	693847	694104	.	+	.	ID=gene724;Dbxref=GeneID:3799291;Name=grxA;Note=SDY0746;gbkey=Gene;gene=grxA;gene_biotype=protein_coding;locus_tag=SDY_0746
NC_007606.1	RefSeq	CDS	693847	694104	.	+	0	ID=cds640;Parent=gene724;Dbxref=Genbank:YP_402419.1,GeneID:3799291;Name=YP_402419.1;Note=functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase%3B also involved in reducing some disulfides in a coupled system with glutathione reductase;gbkey=CDS;gene=grxA;product=glutaredoxin;protein_id=YP_402419.1;transl_table=11
NC_007606.1	RefSeq	gene	694134	694511	.	-	.	ID=gene725;Dbxref=GeneID:3799292;Name=ybjM;Note=SDY0747;gbkey=Gene;gene=ybjM;gene_biotype=protein_coding;locus_tag=SDY_0747
NC_007606.1	RefSeq	CDS	694134	694511	.	-	0	ID=cds641;Parent=gene725;Dbxref=Genbank:YP_402420.1,GeneID:3799292;Name=YP_402420.1;gbkey=CDS;gene=ybjM;product=hypothetical protein;protein_id=YP_402420.1;transl_table=11
NC_007606.1	RefSeq	gene	694781	696466	.	+	.	ID=gene726;Dbxref=GeneID:3799293;Name=SDY_0748;Note=SDY0748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0748
NC_007606.1	RefSeq	CDS	694781	696466	.	+	0	ID=cds642;Parent=gene726;Dbxref=Genbank:YP_402421.1,GeneID:3799293;Name=YP_402421.1;Note=Code: R%3B COG: COG2985;gbkey=CDS;product=hypothetical protein;protein_id=YP_402421.1;transl_table=11
NC_007606.1	RefSeq	gene	696799	697350	.	+	.	ID=gene727;Dbxref=GeneID:3799294;Name=SDY_0749;Note=SDY0749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0749
NC_007606.1	RefSeq	CDS	696799	697350	.	+	0	ID=cds643;Parent=gene727;Dbxref=Genbank:YP_402422.1,GeneID:3799294;Name=YP_402422.1;Note=Code: E%3B COG: COG1045;gbkey=CDS;product=hypothetical protein;protein_id=YP_402422.1;transl_table=11
NC_007606.1	RefSeq	gene	697410	697946	.	-	.	ID=gene728;Dbxref=GeneID:3799295;Name=SDY_0750;Note=SDY0750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0750
NC_007606.1	RefSeq	CDS	697410	697946	.	-	0	ID=cds644;Parent=gene728;Dbxref=Genbank:YP_402423.1,GeneID:3799295;Name=YP_402423.1;Note=Code: S%3B COG: COG3226;gbkey=CDS;product=DeoR-type transcriptional regulator;protein_id=YP_402423.1;transl_table=11
NC_007606.1	RefSeq	gene	698030	699238	.	+	.	ID=gene729;Dbxref=GeneID:3799296;Name=SDY_0751;Note=SDY0751;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0751
NC_007606.1	RefSeq	CDS	698030	699238	.	+	0	ID=cds645;Parent=gene729;Dbxref=Genbank:YP_402424.1,GeneID:3799296;Name=YP_402424.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;product=DeoR-type transcriptional regulator;protein_id=YP_402424.1;transl_table=11
NC_007606.1	RefSeq	gene	699238	699498	.	+	.	ID=gene730;Dbxref=GeneID:3799297;Name=SDY_0752;Note=SDY0752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0752
NC_007606.1	RefSeq	CDS	699238	699498	.	+	0	ID=cds646;Parent=gene730;Dbxref=Genbank:YP_402425.1,GeneID:3799297;Name=YP_402425.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402425.1;transl_table=11
NC_007606.1	RefSeq	region	699477	700244	.	-	.	ID=id116;gbkey=mobile_element
NC_007606.1	RefSeq	gene	699492	699869	.	-	.	ID=gene731;Dbxref=GeneID:3799298;Name=insB;Note=SDY0753;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0753
NC_007606.1	RefSeq	CDS	699492	699869	.	-	0	ID=cds647;Parent=gene731;Dbxref=Genbank:YP_402426.1,GeneID:3799298;Name=YP_402426.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402426.1;transl_table=11
NC_007606.1	RefSeq	gene	699914	700189	.	-	.	ID=gene732;Dbxref=GeneID:3799299;Name=insA;Note=SDY0754;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0754
NC_007606.1	RefSeq	CDS	699914	700189	.	-	0	ID=cds648;Parent=gene732;Dbxref=Genbank:YP_402427.1,GeneID:3799299;Name=YP_402427.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_402427.1;transl_table=11
NC_007606.1	RefSeq	gene	700282	701193	.	-	.	ID=gene733;Dbxref=GeneID:3799300;Name=SDY_0755;Note=SDY0755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0755
NC_007606.1	RefSeq	CDS	700282	701193	.	-	0	ID=cds649;Parent=gene733;Dbxref=Genbank:YP_402428.1,GeneID:3799300;Name=YP_402428.1;Note=Code: EP%3B COG: COG1173;gbkey=CDS;product=transport system permease;protein_id=YP_402428.1;transl_table=11
NC_007606.1	RefSeq	gene	701196	702116	.	-	.	ID=gene734;Dbxref=GeneID:3799301;Name=SDY_0756;Note=SDY0756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0756
NC_007606.1	RefSeq	CDS	701196	702116	.	-	0	ID=cds650;Parent=gene734;Dbxref=Genbank:YP_402429.1,GeneID:3799301;Name=YP_402429.1;Note=Code: EP%3B COG: COG0601;gbkey=CDS;product=transport system permease;protein_id=YP_402429.1;transl_table=11
NC_007606.1	RefSeq	gene	702134	703672	.	-	.	ID=gene735;Dbxref=GeneID:3799302;Name=SDY_0757;Note=SDY0757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0757
NC_007606.1	RefSeq	CDS	702134	703672	.	-	0	ID=cds651;Parent=gene735;Dbxref=Genbank:YP_402430.1,GeneID:3799302;Name=YP_402430.1;Note=Code: E%3B COG: COG0747;gbkey=CDS;product=transport protein;protein_id=YP_402430.1;transl_table=11
NC_007606.1	RefSeq	gene	703692	705530	.	-	.	ID=gene736;Dbxref=GeneID:3799303;Name=SDY_0758;Note=SDY0758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0758
NC_007606.1	RefSeq	CDS	703692	705530	.	-	0	ID=cds652;Parent=gene736;Dbxref=Genbank:YP_402431.1,GeneID:3799303;Name=YP_402431.1;Note=with GsiBCD is involved in glutathione import%3B GsiA contains 2 ATP-binding domains;gbkey=CDS;product=glutathione ABC transporter ATP-binding protein;protein_id=YP_402431.1;transl_table=11
NC_007606.1	RefSeq	gene	705550	706515	.	-	.	ID=gene737;Dbxref=GeneID:3799190;Name=ybiK;Note=SDY0759;gbkey=Gene;gene=ybiK;gene_biotype=protein_coding;locus_tag=SDY_0759
NC_007606.1	RefSeq	CDS	705550	706515	.	-	0	ID=cds653;Parent=gene737;Dbxref=Genbank:YP_402432.1,GeneID:3799190;Name=YP_402432.1;Note=Code: E%3B COG: COG1446;gbkey=CDS;gene=ybiK;product=L-asparaginase;protein_id=YP_402432.1;transl_table=11
NC_007606.1	RefSeq	gene	706719	707954	.	+	.	ID=gene738;Dbxref=GeneID:3799191;Name=moeA;Note=SDY0760;gbkey=Gene;gene=moeA;gene_biotype=protein_coding;locus_tag=SDY_0760
NC_007606.1	RefSeq	CDS	706719	707954	.	+	0	ID=cds654;Parent=gene738;Dbxref=Genbank:YP_402433.1,GeneID:3799191;Name=YP_402433.1;Note=is involved in the formation of active molybdenum cofactor and the chelation of molybdenum;gbkey=CDS;gene=moeA;product=molybdopterin biosynthesis protein MoeA;protein_id=YP_402433.1;transl_table=11
NC_007606.1	RefSeq	gene	707954	708703	.	+	.	ID=gene739;Dbxref=GeneID:3799192;Name=moeB;Note=SDY0761;gbkey=Gene;gene=moeB;gene_biotype=protein_coding;locus_tag=SDY_0761
NC_007606.1	RefSeq	CDS	707954	708703	.	+	0	ID=cds655;Parent=gene739;Dbxref=Genbank:YP_402434.1,GeneID:3799192;Name=YP_402434.1;Note=''ATP-dependent adenylate transferase%2C transfers adenyl moiety to the MoeD subunit of molybdopterin synthase'';gbkey=CDS;gene=moeB;product=molybdopterin biosynthesis protein MoeB;protein_id=YP_402434.1;transl_table=11
NC_007606.1	RefSeq	gene	708779	709441	.	-	.	ID=gene740;Dbxref=GeneID:3799193;Name=mipB;Note=SDY0762;gbkey=Gene;gene=mipB;gene_biotype=protein_coding;locus_tag=SDY_0762
NC_007606.1	RefSeq	CDS	708779	709441	.	-	0	ID=cds656;Parent=gene740;Dbxref=Genbank:YP_402435.2,GeneID:3799193;Name=YP_402435.2;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;gene=mipB;product=fructose-6-phosphate aldolase;protein_id=YP_402435.2;transl_table=11
NC_007606.1	RefSeq	gene	709545	710471	.	+	.	ID=gene741;Dbxref=GeneID:3799194;Name=ybiY;Note=SDY0763;gbkey=Gene;gene=ybiY;gene_biotype=protein_coding;locus_tag=SDY_0763
NC_007606.1	RefSeq	CDS	709545	710471	.	+	0	ID=cds657;Parent=gene741;Dbxref=Genbank:YP_402436.1,GeneID:3799194;Name=YP_402436.1;Note=Code: O%3B COG: COG1180;gbkey=CDS;gene=ybiY;product=pyruvate formate-lyase 2 activating enzyme;protein_id=YP_402436.1;transl_table=11
NC_007606.1	RefSeq	gene	710477	712909	.	+	.	ID=gene742;Dbxref=GeneID:3799195;Name=ybiW;Note=SDY0764;gbkey=Gene;gene=ybiW;gene_biotype=protein_coding;locus_tag=SDY_0764
NC_007606.1	RefSeq	CDS	710477	712909	.	+	0	ID=cds658;Parent=gene742;Dbxref=Genbank:YP_402437.1,GeneID:3799195;Name=YP_402437.1;Note=Code: C%3B COG: COG1882;gbkey=CDS;gene=ybiW;product=formate acetyltransferase;protein_id=YP_402437.1;transl_table=11
NC_007606.1	RefSeq	gene	713055	713711	.	+	.	ID=gene743;Dbxref=GeneID:3799196;Name=SDY_0765;Note=SDY0765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0765
NC_007606.1	RefSeq	CDS	713055	713711	.	+	0	ID=cds659;Parent=gene743;Dbxref=Genbank:YP_402438.1,GeneID:3799196;Name=YP_402438.1;Note=Code: R%3B COG: COG0561;gbkey=CDS;product=hypothetical protein;protein_id=YP_402438.1;transl_table=11
NC_007606.1	RefSeq	region	713694	714459	.	-	.	ID=id117;gbkey=mobile_element
NC_007606.1	RefSeq	gene	713708	714103	.	-	.	ID=gene744;Dbxref=GeneID:3799197;Name=SDY_0766;Note=SDY0766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0766
NC_007606.1	RefSeq	CDS	713708	714103	.	-	0	ID=cds660;Parent=gene744;Dbxref=Genbank:YP_402439.1,GeneID:3799197;Name=YP_402439.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402439.1;transl_table=11
NC_007606.1	RefSeq	gene	714130	714402	.	-	.	ID=gene745;Dbxref=GeneID:18262973;Name=SDY_0767a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0767a
NC_007606.1	RefSeq	CDS	714130	714402	.	-	0	ID=cds661;Parent=gene745;Dbxref=Genbank:YP_009000659.1,GeneID:18262973;Name=YP_009000659.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000659.1;transl_table=11
NC_007606.1	RefSeq	gene	714683	715228	.	-	.	ID=gene746;Dbxref=GeneID:3799198;Name=SDY_0767;Note=SDY0767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0767
NC_007606.1	RefSeq	CDS	714683	715228	.	-	0	ID=cds662;Parent=gene746;Dbxref=Genbank:YP_402440.1,GeneID:3799198;Name=YP_402440.1;Note=Code: K%3B COG: COG1396;gbkey=CDS;product=regulatory protein;protein_id=YP_402440.1;transl_table=11
NC_007606.1	RefSeq	region	716007	717270	.	-	.	ID=id118;gbkey=mobile_element
NC_007606.1	RefSeq	gene	716050	716763	.	-	.	ID=gene747;Dbxref=GeneID:3799200;Name=SDY_0769;Note=SDY0769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0769
NC_007606.1	RefSeq	CDS	716050	716763	.	-	0	ID=cds663;Parent=gene747;Dbxref=Genbank:YP_402442.1,GeneID:3799200;Name=YP_402442.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402442.1;transl_table=11
NC_007606.1	RefSeq	gene	716904	717206	.	-	.	ID=gene748;Dbxref=GeneID:3799201;Name=SDY_0770;Note=SDY0770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0770
NC_007606.1	RefSeq	CDS	716904	717206	.	-	0	ID=cds664;Parent=gene748;Dbxref=Genbank:YP_402443.1,GeneID:3799201;Name=YP_402443.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402443.1;transl_table=11
NC_007606.1	RefSeq	gene	717245	717574	.	+	.	ID=gene749;Dbxref=GeneID:3799202;Name=SDY_0771;Note=SDY0771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0771
NC_007606.1	RefSeq	CDS	717245	717574	.	+	0	ID=cds665;Parent=gene749;Dbxref=Genbank:YP_402444.1,GeneID:3799202;Name=YP_402444.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402444.1;transl_table=11
NC_007606.1	RefSeq	gene	717561	718613	.	+	.	ID=gene750;Dbxref=GeneID:3799203;Name=SDY_0772;Note=SDY0772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0772
NC_007606.1	RefSeq	CDS	717561	718613	.	+	0	ID=cds666;Parent=gene750;Dbxref=Genbank:YP_402445.1,GeneID:3799203;Name=YP_402445.1;gbkey=CDS;product=phage tail fiber protein;protein_id=YP_402445.1;transl_table=11
NC_007606.1	RefSeq	gene	718914	719540	.	+	.	ID=gene751;Dbxref=GeneID:3799204;Name=SDY_0773;Note=SDY0773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0773
NC_007606.1	RefSeq	CDS	718914	719540	.	+	0	ID=cds667;Parent=gene751;Dbxref=Genbank:YP_402446.1,GeneID:3799204;Name=YP_402446.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402446.1;transl_table=11
NC_007606.1	RefSeq	gene	719801	720517	.	+	.	ID=gene752;Dbxref=GeneID:3799205;Name=SDY_0774;Note=SDY0774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0774
NC_007606.1	RefSeq	CDS	719801	720517	.	+	0	ID=cds668;Parent=gene752;Dbxref=Genbank:YP_402447.1,GeneID:3799205;Name=YP_402447.1;gbkey=CDS;product=DNA modification protein;protein_id=YP_402447.1;transl_table=11
NC_007606.1	RefSeq	gene	720885	722144	.	+	.	ID=gene753;Dbxref=GeneID:3799206;Name=ybiU;Note=SDY0775;gbkey=Gene;gene=ybiU;gene_biotype=protein_coding;locus_tag=SDY_0775
NC_007606.1	RefSeq	CDS	720885	722144	.	+	0	ID=cds669;Parent=gene753;Dbxref=Genbank:YP_402448.1,GeneID:3799206;Name=YP_402448.1;gbkey=CDS;gene=ybiU;product=hypothetical protein;protein_id=YP_402448.1;transl_table=11
NC_007606.1	RefSeq	gene	722385	723977	.	-	.	ID=gene754;Dbxref=GeneID:3799207;Name=ybiT;Note=SDY0776;gbkey=Gene;gene=ybiT;gene_biotype=protein_coding;locus_tag=SDY_0776
NC_007606.1	RefSeq	CDS	722385	723977	.	-	0	ID=cds670;Parent=gene754;Dbxref=Genbank:YP_402449.1,GeneID:3799207;Name=YP_402449.1;Note=Code: R%3B COG: COG0488;gbkey=CDS;gene=ybiT;product=ATPase;protein_id=YP_402449.1;transl_table=11
NC_007606.1	RefSeq	gene	724196	725116	.	+	.	ID=gene755;Dbxref=GeneID:3799208;Name=ybiS;Note=SDY0777;gbkey=Gene;gene=ybiS;gene_biotype=protein_coding;locus_tag=SDY_0777
NC_007606.1	RefSeq	CDS	724196	725116	.	+	0	ID=cds671;Parent=gene755;Dbxref=Genbank:YP_402450.1,GeneID:3799208;Name=YP_402450.1;Note=Code: S%3B COG: COG1376;gbkey=CDS;gene=ybiS;product=hypothetical protein;protein_id=YP_402450.1;transl_table=11
NC_007606.1	RefSeq	gene	725174	726293	.	-	.	ID=gene756;Dbxref=GeneID:3797879;Name=ybiR;Note=SDY0778;gbkey=Gene;gene=ybiR;gene_biotype=pseudogene;locus_tag=SDY_0778;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	726290	726757	.	-	.	ID=gene757;Dbxref=GeneID:3797880;Name=SDY_0779;Note=SDY0779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0779;pseudogene=unknown
NC_007606.1	RefSeq	CDS	726290	726757	.	-	0	ID=cds672;Parent=gene757;Dbxref=Genbank:YP_402452.1,GeneID:3797880;Name=YP_402452.1;Note=Transcriptional regulator that represses the manganese transporter MntH when manganese is present;gbkey=CDS;product=manganese transport regulator MntR;protein_id=YP_402452.1;transl_table=11
NC_007606.1	RefSeq	gene	727343	728926	.	+	.	ID=gene758;Dbxref=GeneID:3797881;Name=ybiP;Note=SDY0780;gbkey=Gene;gene=ybiP;gene_biotype=protein_coding;locus_tag=SDY_0780
NC_007606.1	RefSeq	CDS	727343	728926	.	+	0	ID=cds673;Parent=gene758;Dbxref=Genbank:YP_402453.1,GeneID:3797881;Name=YP_402453.1;Note=Code: R%3B COG: COG2194;gbkey=CDS;gene=ybiP;product=sulfatase;protein_id=YP_402453.1;transl_table=11
NC_007606.1	RefSeq	gene	728975	729490	.	-	.	ID=gene759;Dbxref=GeneID:3797882;Name=ompX;Note=SDY0781;gbkey=Gene;gene=ompX;gene_biotype=protein_coding;locus_tag=SDY_0781
NC_007606.1	RefSeq	CDS	728975	729490	.	-	0	ID=cds674;Parent=gene759;Dbxref=Genbank:YP_402454.1,GeneID:3797882;Name=YP_402454.1;Note=OmpX%3B involved in cell adhesion%3B forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface%3B mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains;gbkey=CDS;gene=ompX;product=outer membrane protein X;protein_id=YP_402454.1;transl_table=11
NC_007606.1	RefSeq	gene	729843	730731	.	+	.	ID=gene760;Dbxref=GeneID:3797883;Name=ybiF;Note=SDY0782%3B frameshift%3B original product: Hypothetical transport protein ybiF;gbkey=Gene;gene=ybiF;gene_biotype=pseudogene;locus_tag=SDY_0782;pseudo=true
NC_007606.1	RefSeq	gene	731030	731533	.	+	.	ID=gene761;Dbxref=GeneID:3797884;Name=dps;Note=SDY0783;gbkey=Gene;gene=dps;gene_biotype=protein_coding;locus_tag=SDY_0783
NC_007606.1	RefSeq	CDS	731030	731533	.	+	0	ID=cds675;Parent=gene761;Dbxref=Genbank:YP_402455.1,GeneID:3797884;Name=YP_402455.1;Note=binds DNA in a non-sequence-specific manner and is abundant during stationary phase%3B forms a DNA-protein crystal that protects DNA from damage%3B required for normal starvation response and long-term stationary viability%3B forms a homododecameric complex and sequesters iron which provides protection against oxidative damage;gbkey=CDS;gene=dps;product=DNA starvation/stationary phase protection protein Dps;protein_id=YP_402455.1;transl_table=11
NC_007606.1	RefSeq	region	731630	732264	.	-	.	ID=id119;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	731934	732209	.	-	.	ID=gene762;Dbxref=GeneID:3797885;Name=insA;Note=SDY0784;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0784
NC_007606.1	RefSeq	CDS	731934	732209	.	-	0	ID=cds676;Parent=gene762;Dbxref=Genbank:YP_402456.1,GeneID:3797885;Name=YP_402456.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_402456.1;transl_table=11
NC_007606.1	RefSeq	gene	732583	733329	.	+	.	ID=gene763;Dbxref=GeneID:3797886;Name=glnH;Note=SDY0785;gbkey=Gene;gene=glnH;gene_biotype=protein_coding;locus_tag=SDY_0785
NC_007606.1	RefSeq	CDS	732583	733329	.	+	0	ID=cds677;Parent=gene763;Dbxref=Genbank:YP_402457.1,GeneID:3797886;Name=YP_402457.1;Note=similar to periplasmic-binding component of ABC transporters;gbkey=CDS;gene=glnH;product=glutamine ABC transporter substrate-binding protein;protein_id=YP_402457.1;transl_table=11
NC_007606.1	RefSeq	gene	733468	734127	.	+	.	ID=gene764;Dbxref=GeneID:3797887;Name=glnP;Note=SDY0786;gbkey=Gene;gene=glnP;gene_biotype=protein_coding;locus_tag=SDY_0786
NC_007606.1	RefSeq	CDS	733468	734127	.	+	0	ID=cds678;Parent=gene764;Dbxref=Genbank:YP_402458.1,GeneID:3797887;Name=YP_402458.1;Note=similar to permease component of ABC transporters%3B mutations impair ability of Escherichia coli to transport and utilize glutamine;gbkey=CDS;gene=glnP;product=glutamine ABC transporter permease;protein_id=YP_402458.1;transl_table=11
NC_007606.1	RefSeq	gene	734124	734846	.	+	.	ID=gene765;Dbxref=GeneID:3797888;Name=glnQ;Note=SDY0787;gbkey=Gene;gene=glnQ;gene_biotype=protein_coding;locus_tag=SDY_0787
NC_007606.1	RefSeq	CDS	734124	734846	.	+	0	ID=cds679;Parent=gene765;Dbxref=Genbank:YP_402459.1,GeneID:3797888;Name=YP_402459.1;Note=similar to ATP-binding component of ABC transporters;gbkey=CDS;gene=glnQ;product=glutamine ABC transporter ATP-binding protein;protein_id=YP_402459.1;transl_table=11
NC_007606.1	RefSeq	gene	734963	736357	.	+	.	ID=gene766;Dbxref=GeneID:3797889;Name=ybiO;Note=SDY0788%3B contains in-frame stop codon%3B original product:  transport protein;gbkey=Gene;gene=ybiO;gene_biotype=pseudogene;locus_tag=SDY_0788;pseudo=true
NC_007606.1	RefSeq	region	736318	737083	.	-	.	ID=id120;gbkey=mobile_element;gene=ybiO
NC_007606.1	RefSeq	gene	736332	736727	.	-	.	ID=gene767;Dbxref=GeneID:3797890;Name=SDY_0789;Note=SDY0789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0789
NC_007606.1	RefSeq	CDS	736332	736727	.	-	0	ID=cds680;Parent=gene767;Dbxref=Genbank:YP_402460.1,GeneID:3797890;Name=YP_402460.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402460.1;transl_table=11
NC_007606.1	RefSeq	gene	736754	737026	.	-	.	ID=gene768;Dbxref=GeneID:18262974;Name=SDY_0788a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0788a
NC_007606.1	RefSeq	CDS	736754	737026	.	-	0	ID=cds681;Parent=gene768;Dbxref=Genbank:YP_009000660.1,GeneID:18262974;Name=YP_009000660.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000660.1;transl_table=11
NC_007606.1	RefSeq	gene	737959	738966	.	-	.	ID=gene769;Dbxref=GeneID:3797891;Name=ybiN;Note=SDY0790;gbkey=Gene;gene=ybiN;gene_biotype=protein_coding;locus_tag=SDY_0790
NC_007606.1	RefSeq	CDS	737959	738966	.	-	0	ID=cds682;Parent=gene769;Dbxref=Genbank:YP_402461.1,GeneID:3797891;Name=YP_402461.1;Note=Code: R%3B COG: COG3129;gbkey=CDS;gene=ybiN;product=SAM-dependent methyltransferase;protein_id=YP_402461.1;transl_table=11
NC_007606.1	RefSeq	gene	739161	739421	.	+	.	ID=gene770;Dbxref=GeneID:3797892;Name=ybiM;Note=SDY0791;gbkey=Gene;gene=ybiM;gene_biotype=protein_coding;locus_tag=SDY_0791
NC_007606.1	RefSeq	CDS	739161	739421	.	+	0	ID=cds683;Parent=gene770;Dbxref=Genbank:YP_402462.2,GeneID:3797892;Name=YP_402462.2;gbkey=CDS;gene=ybiM;product=hypothetical protein;protein_id=YP_402462.2;transl_table=11
NC_007606.1	RefSeq	gene	739686	740018	.	+	.	ID=gene771;Dbxref=GeneID:3797893;Name=SDY_0792;Note=SDY0792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0792
NC_007606.1	RefSeq	CDS	739686	740018	.	+	0	ID=cds684;Parent=gene771;Dbxref=Genbank:YP_402463.1,GeneID:3797893;Name=YP_402463.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402463.1;transl_table=11
NC_007606.1	RefSeq	region	739990	741417	.	+	.	ID=id121;gbkey=mobile_element
NC_007606.1	RefSeq	gene	740057	741403	.	+	.	ID=gene772;Dbxref=GeneID:3797894;Name=SDY_0793;Note=SDY0793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0793
NC_007606.1	RefSeq	CDS	740057	741403	.	+	0	ID=cds685;Parent=gene772;Dbxref=Genbank:YP_402464.1,GeneID:3797894;Name=YP_402464.1;Note=Code: L%3B COG: COG3385;gbkey=CDS;product=insertion sequence element IS4 transposase InsG;protein_id=YP_402464.1;transl_table=11
NC_007606.1	RefSeq	gene	741577	743406	.	+	.	ID=gene773;Dbxref=GeneID:3797895;Name=SDY_0794;Note=SDY0794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0794
NC_007606.1	RefSeq	CDS	741577	743406	.	+	0	ID=cds686;Parent=gene773;Dbxref=Genbank:YP_402465.1,GeneID:3797895;Name=YP_402465.1;Note=''Fiu%3B YbiL%3B porin involved in the uptake of iron complexed with catecholate siderophores (e.g. dihydroxybenzoylserine%2C dihydroxybenzoate) and beta lactam agents%3B Fiu interacts with TonB which provides the energy required for transport across the outer membrane%3B acts as a receptor for iron-siderophores and microcins E492%2C M%2C and H47%3B outer membrane protein'';gbkey=CDS;product=catecholate siderophore receptor Fiu;protein_id=YP_402465.1;transl_table=11
NC_007606.1	RefSeq	gene	743448	744125	.	+	.	ID=gene774;Dbxref=GeneID:3797896;Name=ybiX;Note=SDY0795;gbkey=Gene;gene=ybiX;gene_biotype=protein_coding;locus_tag=SDY_0795
NC_007606.1	RefSeq	CDS	743448	744125	.	+	0	ID=cds687;Parent=gene774;Dbxref=Genbank:YP_402466.2,GeneID:3797896;Name=YP_402466.2;Note=Code: S%3B COG: COG3128;gbkey=CDS;gene=ybiX;product=hydroxylase;protein_id=YP_402466.2;transl_table=11
NC_007606.1	RefSeq	gene	744199	744465	.	+	.	ID=gene775;Dbxref=GeneID:3797897;Name=ybiI;Note=SDY0796;gbkey=Gene;gene=ybiI;gene_biotype=protein_coding;locus_tag=SDY_0796
NC_007606.1	RefSeq	CDS	744199	744465	.	+	0	ID=cds688;Parent=gene775;Dbxref=Genbank:YP_402467.1,GeneID:3797897;Name=YP_402467.1;Note=Code: T%3B COG: COG1734;gbkey=CDS;gene=ybiI;product=hypothetical protein;protein_id=YP_402467.1;transl_table=11
NC_007606.1	RefSeq	gene	744731	744991	.	+	.	ID=gene776;Dbxref=GeneID:3797898;Name=ybiJ;Note=SDY0797;gbkey=Gene;gene=ybiJ;gene_biotype=protein_coding;locus_tag=SDY_0797
NC_007606.1	RefSeq	CDS	744731	744991	.	+	0	ID=cds689;Parent=gene776;Dbxref=Genbank:YP_402468.1,GeneID:3797898;Name=YP_402468.1;gbkey=CDS;gene=ybiJ;product=hypothetical protein;protein_id=YP_402468.1;transl_table=11
NC_007606.1	RefSeq	gene	745219	746304	.	-	.	ID=gene777;Dbxref=GeneID:3799074;Name=ybiC;Note=SDY0798;gbkey=Gene;gene=ybiC;gene_biotype=protein_coding;locus_tag=SDY_0798
NC_007606.1	RefSeq	CDS	745219	746304	.	-	0	ID=cds690;Parent=gene777;Dbxref=Genbank:YP_402469.1,GeneID:3799074;Name=YP_402469.1;Note=Code: C%3B COG: COG2055;gbkey=CDS;gene=ybiC;product=hypothetical protein;protein_id=YP_402469.1;transl_table=11
NC_007606.1	RefSeq	gene	746445	747407	.	-	.	ID=gene778;Dbxref=GeneID:3799075;Name=ybiB;Note=SDY0799;gbkey=Gene;gene=ybiB;gene_biotype=protein_coding;locus_tag=SDY_0799
NC_007606.1	RefSeq	CDS	746445	747407	.	-	0	ID=cds691;Parent=gene778;Dbxref=Genbank:YP_402470.1,GeneID:3799075;Name=YP_402470.1;Note=Code: E%3B COG: COG0547;gbkey=CDS;gene=ybiB;product=glycosyl transferase;protein_id=YP_402470.1;transl_table=11
NC_007606.1	RefSeq	gene	747435	749585	.	-	.	ID=gene779;Dbxref=GeneID:3799076;Name=dinG;Note=SDY0800;gbkey=Gene;gene=dinG;gene_biotype=protein_coding;locus_tag=SDY_0800
NC_007606.1	RefSeq	CDS	747435	749585	.	-	0	ID=cds692;Parent=gene779;Dbxref=Genbank:YP_402471.1,GeneID:3799076;Name=YP_402471.1;Note=helicase involved in DNA repair and perhaps also replication;gbkey=CDS;gene=dinG;product=ATP-dependent DNA helicase DinG;protein_id=YP_402471.1;transl_table=11
NC_007606.1	RefSeq	region	749968	750733	.	-	.	ID=id122;gbkey=mobile_element
NC_007606.1	RefSeq	gene	749982	750377	.	-	.	ID=gene780;Dbxref=GeneID:3799077;Name=SDY_0801;Note=SDY0801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0801
NC_007606.1	RefSeq	CDS	749982	750377	.	-	0	ID=cds693;Parent=gene780;Dbxref=Genbank:YP_402472.1,GeneID:3799077;Name=YP_402472.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402472.1;transl_table=11
NC_007606.1	RefSeq	gene	750404	750676	.	-	.	ID=gene781;Dbxref=GeneID:18262975;Name=SDY_0801a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0801a
NC_007606.1	RefSeq	CDS	750404	750676	.	-	0	ID=cds694;Parent=gene781;Dbxref=Genbank:YP_009000661.1,GeneID:18262975;Name=YP_009000661.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000661.1;transl_table=11
NC_007606.1	RefSeq	gene	750928	751266	.	+	.	ID=gene782;Dbxref=GeneID:3799079;Name=SDY_0803;Note=SDY0803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0803
NC_007606.1	RefSeq	CDS	750928	751266	.	+	0	ID=cds695;Parent=gene782;Dbxref=Genbank:YP_402474.1,GeneID:3799079;Name=YP_402474.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402474.1;transl_table=11
NC_007606.1	RefSeq	region	751245	752010	.	+	.	ID=id123;gbkey=mobile_element
NC_007606.1	RefSeq	gene	751302	751574	.	+	.	ID=gene783;Dbxref=GeneID:18262976;Name=SDY_803a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_803a
NC_007606.1	RefSeq	CDS	751302	751574	.	+	0	ID=cds696;Parent=gene783;Dbxref=Genbank:YP_009000662.1,GeneID:18262976;Name=YP_009000662.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000662.1;transl_table=11
NC_007606.1	RefSeq	gene	751601	751996	.	+	.	ID=gene784;Dbxref=GeneID:3799081;Name=SDY_0805;Note=SDY0805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0805
NC_007606.1	RefSeq	CDS	751601	751996	.	+	0	ID=cds697;Parent=gene784;Dbxref=Genbank:YP_402476.1,GeneID:3799081;Name=YP_402476.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402476.1;transl_table=11
NC_007606.1	RefSeq	gene	752216	753580	.	-	.	ID=gene785;Dbxref=GeneID:3799082;Name=rhlE;Note=SDY0806;gbkey=Gene;gene=rhlE;gene_biotype=protein_coding;locus_tag=SDY_0806
NC_007606.1	RefSeq	CDS	752216	753580	.	-	0	ID=cds698;Parent=gene785;Dbxref=Genbank:YP_402477.1,GeneID:3799082;Name=YP_402477.1;Note=this helicase is not essential cell growth;gbkey=CDS;gene=rhlE;product=ATP-dependent RNA helicase RhlE;protein_id=YP_402477.1;transl_table=11
NC_007606.1	RefSeq	gene	753797	754480	.	+	.	ID=gene786;Dbxref=GeneID:3799083;Name=ybiH;Note=SDY0807;gbkey=Gene;gene=ybiH;gene_biotype=protein_coding;locus_tag=SDY_0807
NC_007606.1	RefSeq	CDS	753797	754480	.	+	0	ID=cds699;Parent=gene786;Dbxref=Genbank:YP_402478.1,GeneID:3799083;Name=YP_402478.1;Note=Code: K%3B COG: COG1309;gbkey=CDS;gene=ybiH;product=DNA-binding transcriptional regulator;protein_id=YP_402478.1;transl_table=11
NC_007606.1	RefSeq	gene	754480	755478	.	+	.	ID=gene787;Dbxref=GeneID:3799084;Name=SDY_0808;Note=SDY0808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0808
NC_007606.1	RefSeq	CDS	754480	755478	.	+	0	ID=cds700;Parent=gene787;Dbxref=Genbank:YP_402479.1,GeneID:3799084;Name=YP_402479.1;Note=Code: M%3B COG: COG0845;gbkey=CDS;product=hypothetical protein;protein_id=YP_402479.1;transl_table=11
NC_007606.1	RefSeq	gene	755456	757207	.	+	.	ID=gene788;Dbxref=GeneID:3799085;Name=ybhF;Note=SDY0809;gbkey=Gene;gene=ybhF;gene_biotype=protein_coding;locus_tag=SDY_0809
NC_007606.1	RefSeq	CDS	755456	757207	.	+	0	ID=cds701;Parent=gene788;Dbxref=Genbank:YP_402480.1,GeneID:3799085;Name=YP_402480.1;Note=Code: V%3B COG: COG1131;gbkey=CDS;gene=ybhF;product=ATPase;protein_id=YP_402480.1;transl_table=11
NC_007606.1	RefSeq	gene	757200	758333	.	+	.	ID=gene789;Dbxref=GeneID:3799086;Name=ybhS;Note=SDY0810;gbkey=Gene;gene=ybhS;gene_biotype=protein_coding;locus_tag=SDY_0810
NC_007606.1	RefSeq	CDS	757200	758333	.	+	0	ID=cds702;Parent=gene789;Dbxref=Genbank:YP_402481.1,GeneID:3799086;Name=YP_402481.1;Note=Code: V%3B COG: COG0842;gbkey=CDS;gene=ybhS;product=hypothetical protein;protein_id=YP_402481.1;transl_table=11
NC_007606.1	RefSeq	gene	758344	759450	.	+	.	ID=gene790;Dbxref=GeneID:3799087;Name=ybhR;Note=SDY0811;gbkey=Gene;gene=ybhR;gene_biotype=protein_coding;locus_tag=SDY_0811
NC_007606.1	RefSeq	CDS	758344	759450	.	+	0	ID=cds703;Parent=gene790;Dbxref=Genbank:YP_402482.1,GeneID:3799087;Name=YP_402482.1;Note=Code: V%3B COG: COG0842;gbkey=CDS;gene=ybhR;product=hypothetical protein;protein_id=YP_402482.1;transl_table=11
NC_007606.1	RefSeq	gene	759412	759822	.	-	.	ID=gene791;Dbxref=GeneID:3799088;Name=ybhQ;Note=SDY0812;gbkey=Gene;gene=ybhQ;gene_biotype=protein_coding;locus_tag=SDY_0812
NC_007606.1	RefSeq	CDS	759412	759822	.	-	0	ID=cds704;Parent=gene791;Dbxref=Genbank:YP_402483.1,GeneID:3799088;Name=YP_402483.1;gbkey=CDS;gene=ybhQ;product=hypothetical protein;protein_id=YP_402483.1;transl_table=11
NC_007606.1	RefSeq	gene	759955	760716	.	+	.	ID=gene792;Dbxref=GeneID:3799089;Name=ybhP;Note=SDY0813;gbkey=Gene;gene=ybhP;gene_biotype=protein_coding;locus_tag=SDY_0813
NC_007606.1	RefSeq	CDS	759955	760716	.	+	0	ID=cds705;Parent=gene792;Dbxref=Genbank:YP_402484.1,GeneID:3799089;Name=YP_402484.1;Note=Code: R%3B COG: COG3568;gbkey=CDS;gene=ybhP;product=hypothetical protein;protein_id=YP_402484.1;transl_table=11
NC_007606.1	RefSeq	gene	760713	761945	.	+	.	ID=gene793;Dbxref=GeneID:3799090;Name=ybhO;Note=SDY0814;gbkey=Gene;gene=ybhO;gene_biotype=protein_coding;locus_tag=SDY_0814
NC_007606.1	RefSeq	CDS	760713	761945	.	+	0	ID=cds706;Parent=gene793;Dbxref=Genbank:YP_402485.1,GeneID:3799090;Name=YP_402485.1;Note=Code: I%3B COG: COG1502;gbkey=CDS;gene=ybhO;product=cardiolipin synthase 2;protein_id=YP_402485.1;transl_table=11
NC_007606.1	RefSeq	gene	761945	762685	.	+	.	ID=gene794;Dbxref=GeneID:3799091;Name=ybhN;Note=SDY0815;gbkey=Gene;gene=ybhN;gene_biotype=protein_coding;locus_tag=SDY_0815
NC_007606.1	RefSeq	CDS	761945	762685	.	+	0	ID=cds707;Parent=gene794;Dbxref=Genbank:YP_402486.1,GeneID:3799091;Name=YP_402486.1;Note=Code: S%3B COG: COG0392;gbkey=CDS;gene=ybhN;product=hypothetical protein;protein_id=YP_402486.1;transl_table=11
NC_007606.1	RefSeq	gene	762669	762995	.	-	.	ID=gene795;Dbxref=GeneID:3799092;Name=SDY_0816;Note=SDY0816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0816
NC_007606.1	RefSeq	CDS	762669	762995	.	-	0	ID=cds708;Parent=gene795;Dbxref=Genbank:YP_402487.1,GeneID:3799092;Name=YP_402487.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_402487.1;transl_table=11
NC_007606.1	RefSeq	region	762681	762805	.	+	.	ID=id124;Note=fragment;gbkey=mobile_element;gene=ybhN
NC_007606.1	RefSeq	region	762800	763052	.	-	.	ID=id125;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	763048	763602	.	-	.	ID=gene796;Dbxref=GeneID:3795808;Name=ybhL;Note=SDY0817;gbkey=Gene;gene=ybhL;gene_biotype=protein_coding;locus_tag=SDY_0817
NC_007606.1	RefSeq	CDS	763048	763602	.	-	0	ID=cds709;Parent=gene796;Dbxref=Genbank:YP_402488.1,GeneID:3795808;Name=YP_402488.1;Note=Code: R%3B COG: COG0670;gbkey=CDS;gene=ybhL;product=hypothetical protein;protein_id=YP_402488.1;transl_table=11
NC_007606.1	RefSeq	region	763700	764465	.	-	.	ID=id126;gbkey=mobile_element
NC_007606.1	RefSeq	gene	763714	764109	.	-	.	ID=gene797;Dbxref=GeneID:3795809;Name=SDY_0818;Note=SDY0818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0818
NC_007606.1	RefSeq	CDS	763714	764109	.	-	0	ID=cds710;Parent=gene797;Dbxref=Genbank:YP_402489.2,GeneID:3795809;Name=YP_402489.2;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402489.2;transl_table=11
NC_007606.1	RefSeq	gene	764136	764408	.	-	.	ID=gene798;Dbxref=GeneID:18262977;Name=SDY_0819a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0819a
NC_007606.1	RefSeq	CDS	764136	764408	.	-	0	ID=cds711;Parent=gene798;Dbxref=Genbank:YP_009000663.1,GeneID:18262977;Name=YP_009000663.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000663.1;transl_table=11
NC_007606.1	RefSeq	region	764465	765707	.	+	.	ID=id127;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	764468	764833	.	+	.	ID=gene799;Dbxref=GeneID:3795810;Name=SDY_0819;Note=SDY0819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0819
NC_007606.1	RefSeq	CDS	764468	764833	.	+	0	ID=cds712;Parent=gene799;Dbxref=Genbank:YP_402490.1,GeneID:3795810;Name=YP_402490.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_402490.1;transl_table=11
NC_007606.1	RefSeq	gene	764791	765696	.	+	.	ID=gene800;Dbxref=GeneID:3795811;Name=SDY_0820;Note=SDY0820;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0820
NC_007606.1	RefSeq	CDS	764791	765696	.	+	0	ID=cds713;Parent=gene800;Dbxref=Genbank:YP_402491.2,GeneID:3795811;Name=YP_402491.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_402491.2;transl_table=11
NC_007606.1	RefSeq	gene	766002	766454	.	-	.	ID=gene801;Dbxref=GeneID:3795812;Name=moaE;Note=SDY0821;gbkey=Gene;gene=moaE;gene_biotype=protein_coding;locus_tag=SDY_0821
NC_007606.1	RefSeq	CDS	766002	766454	.	-	0	ID=cds714;Parent=gene801;Dbxref=Genbank:YP_402492.1,GeneID:3795812;Name=YP_402492.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaE;product=molybdopterin synthase large subunit;protein_id=YP_402492.1;transl_table=11
NC_007606.1	RefSeq	gene	766456	766701	.	-	.	ID=gene802;Dbxref=GeneID:3795813;Name=moaD;Note=SDY0822;gbkey=Gene;gene=moaD;gene_biotype=protein_coding;locus_tag=SDY_0822
NC_007606.1	RefSeq	CDS	766456	766701	.	-	0	ID=cds715;Parent=gene802;Dbxref=Genbank:YP_402493.1,GeneID:3795813;Name=YP_402493.1;Note=catalyzes the conversion of molybdopterin precursor Z into molybdopterin;gbkey=CDS;gene=moaD;product=molybdopterin synthase small subunit;protein_id=YP_402493.1;transl_table=11
NC_007606.1	RefSeq	gene	766694	767179	.	-	.	ID=gene803;Dbxref=GeneID:3795814;Name=moaC;Note=SDY0823;gbkey=Gene;gene=moaC;gene_biotype=protein_coding;locus_tag=SDY_0823
NC_007606.1	RefSeq	CDS	766694	767179	.	-	0	ID=cds716;Parent=gene803;Dbxref=Genbank:YP_402494.1,GeneID:3795814;Name=YP_402494.1;Note=MoaC%3B along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z%3B involved in molybdenum cofactor biosynthesis;gbkey=CDS;gene=moaC;product=molybdenum cofactor biosynthesis protein C;protein_id=YP_402494.1;transl_table=11
NC_007606.1	RefSeq	gene	767182	767694	.	-	.	ID=gene804;Dbxref=GeneID:3795815;Name=moaB;Note=SDY0824;gbkey=Gene;gene=moaB;gene_biotype=protein_coding;locus_tag=SDY_0824
NC_007606.1	RefSeq	CDS	767182	767694	.	-	0	ID=cds717;Parent=gene804;Dbxref=Genbank:YP_402495.1,GeneID:3795815;Name=YP_402495.1;Note=Code: H%3B COG: COG0521;gbkey=CDS;gene=moaB;product=molybdopterin biosynthesis%2C protein B;protein_id=YP_402495.1;transl_table=11
NC_007606.1	RefSeq	gene	767716	768705	.	-	.	ID=gene805;Dbxref=GeneID:3795816;Name=moaA;Note=SDY0825;gbkey=Gene;gene=moaA;gene_biotype=protein_coding;locus_tag=SDY_0825
NC_007606.1	RefSeq	CDS	767716	768705	.	-	0	ID=cds718;Parent=gene805;Dbxref=Genbank:YP_402496.1,GeneID:3795816;Name=YP_402496.1;Note=''together with moaC%2C is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z'';gbkey=CDS;gene=moaA;product=molybdenum cofactor biosynthesis protein A;protein_id=YP_402496.1;transl_table=11
NC_007606.1	RefSeq	gene	769102	770010	.	+	.	ID=gene806;Dbxref=GeneID:3795817;Name=ybhK;Note=SDY0826;gbkey=Gene;gene=ybhK;gene_biotype=protein_coding;locus_tag=SDY_0826
NC_007606.1	RefSeq	CDS	769102	770010	.	+	0	ID=cds719;Parent=gene806;Dbxref=Genbank:YP_402497.1,GeneID:3795817;Name=YP_402497.1;Note=Code: S%3B COG: COG0391;gbkey=CDS;gene=ybhK;product=structural protein;protein_id=YP_402497.1;transl_table=11
NC_007606.1	RefSeq	gene	770201	772222	.	-	.	ID=gene807;Dbxref=GeneID:3795818;Name=uvrB;Note=SDY0827;gbkey=Gene;gene=uvrB;gene_biotype=protein_coding;locus_tag=SDY_0827
NC_007606.1	RefSeq	CDS	770201	772222	.	-	0	ID=cds720;Parent=gene807;Dbxref=Genbank:YP_402498.1,GeneID:3795818;Name=YP_402498.1;Note=''The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands%2C where it probes for the presence of a lesion'';gbkey=CDS;gene=uvrB;product=excinuclease ABC subunit B;protein_id=YP_402498.1;transl_table=11
NC_007606.1	RefSeq	gene	772801	773478	.	-	.	ID=gene808;Dbxref=GeneID:3795819;Name=bioD;Note=SDY0828;gbkey=Gene;gene=bioD;gene_biotype=protein_coding;locus_tag=SDY_0828
NC_007606.1	RefSeq	CDS	772801	773478	.	-	0	ID=cds721;Parent=gene808;Dbxref=Genbank:YP_402499.1,GeneID:3795819;Name=YP_402499.1;Note=''DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium'';gbkey=CDS;gene=bioD;product=dithiobiotin synthetase;protein_id=YP_402499.1;transl_table=11
NC_007606.1	RefSeq	gene	773471	774226	.	-	.	ID=gene809;Dbxref=GeneID:3795820;Name=bioC;Note=SDY0829;gbkey=Gene;gene=bioC;gene_biotype=protein_coding;locus_tag=SDY_0829
NC_007606.1	RefSeq	CDS	773471	774226	.	-	0	ID=cds722;Parent=gene809;Dbxref=Genbank:YP_402500.1,GeneID:3795820;Name=YP_402500.1;Note=''methyltransferase%3B acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA%2C a biotin precursor%3B member of the bio operon (bioABFCD)%3B in Escherichia coli%2C bioC-null mutants require biotin for growth'';gbkey=CDS;gene=bioC;product=biotin biosynthesis protein BioC;protein_id=YP_402500.1;transl_table=11
NC_007606.1	RefSeq	gene	774213	775367	.	-	.	ID=gene810;Dbxref=GeneID:3795821;Name=bioF;Note=SDY0830;gbkey=Gene;gene=bioF;gene_biotype=protein_coding;locus_tag=SDY_0830
NC_007606.1	RefSeq	CDS	774213	775367	.	-	0	ID=cds723;Parent=gene810;Dbxref=Genbank:YP_402501.1,GeneID:3795821;Name=YP_402501.1;Note=catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine;gbkey=CDS;gene=bioF;product=8-amino-7-oxononanoate synthase;protein_id=YP_402501.1;transl_table=11
NC_007606.1	RefSeq	gene	775364	776404	.	-	.	ID=gene811;Dbxref=GeneID:3795822;Name=bioB;Note=SDY0831;gbkey=Gene;gene=bioB;gene_biotype=protein_coding;locus_tag=SDY_0831
NC_007606.1	RefSeq	CDS	775364	776404	.	-	0	ID=cds724;Parent=gene811;Dbxref=Genbank:YP_402502.1,GeneID:3795822;Name=YP_402502.1;Note=Code: H%3B COG: COG0502;gbkey=CDS;gene=bioB;product=biotin synthase;protein_id=YP_402502.1;transl_table=11
NC_007606.1	RefSeq	gene	776492	777781	.	+	.	ID=gene812;Dbxref=GeneID:3795823;Name=bioA;Note=SDY0832;gbkey=Gene;gene=bioA;gene_biotype=protein_coding;locus_tag=SDY_0832
NC_007606.1	RefSeq	CDS	776492	777781	.	+	0	ID=cds725;Parent=gene812;Dbxref=Genbank:YP_402503.1,GeneID:3795823;Name=YP_402503.1;Note=''catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7%2C8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate'';gbkey=CDS;gene=bioA;product=adenosylmethionine-8-amino-7-oxononanoate aminotransferase;protein_id=YP_402503.1;transl_table=11
NC_007606.1	RefSeq	gene	777840	778316	.	+	.	ID=gene813;Dbxref=GeneID:3795824;Name=ybhB;Note=SDY0833;gbkey=Gene;gene=ybhB;gene_biotype=protein_coding;locus_tag=SDY_0833
NC_007606.1	RefSeq	CDS	777840	778316	.	+	0	ID=cds726;Parent=gene813;Dbxref=Genbank:YP_402504.1,GeneID:3795824;Name=YP_402504.1;Note=YbhB%3B similar to rat and human kinase inhibitory proteins;gbkey=CDS;gene=ybhB;product=kinase inhibitor protein;protein_id=YP_402504.1;transl_table=11
NC_007606.1	RefSeq	gene	778896	780659	.	+	.	ID=gene814;Dbxref=GeneID:3795825;Name=ipaH_1;Note=SDY0834;gbkey=Gene;gene=ipaH_1;gene_biotype=protein_coding;locus_tag=SDY_0834
NC_007606.1	RefSeq	CDS	778896	780659	.	+	0	ID=cds727;Parent=gene814;Dbxref=Genbank:YP_402505.1,GeneID:3795825;Name=YP_402505.1;Note=Code: S%3B COG: COG4886;gbkey=CDS;gene=ipaH_1;product=invasion plasmid antigen;protein_id=YP_402505.1;transl_table=11
NC_007606.1	RefSeq	region	780920	782183	.	+	.	ID=id128;gbkey=mobile_element
NC_007606.1	RefSeq	gene	780984	781286	.	+	.	ID=gene815;Dbxref=GeneID:3795826;Name=SDY_0835;Note=SDY0835;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0835
NC_007606.1	RefSeq	CDS	780984	781286	.	+	0	ID=cds728;Parent=gene815;Dbxref=Genbank:YP_402506.1,GeneID:3795826;Name=YP_402506.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402506.1;transl_table=11
NC_007606.1	RefSeq	gene	781427	782140	.	+	.	ID=gene816;Dbxref=GeneID:3795827;Name=SDY_0836;Note=SDY0836;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0836
NC_007606.1	RefSeq	CDS	781427	782140	.	+	0	ID=cds729;Parent=gene816;Dbxref=Genbank:YP_402507.1,GeneID:3795827;Name=YP_402507.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402507.1;transl_table=11
NC_007606.1	RefSeq	gene	782376	783008	.	-	.	ID=gene817;Dbxref=GeneID:3799460;Name=yliJ;Note=SDY0838;gbkey=Gene;gene=yliJ;gene_biotype=protein_coding;locus_tag=SDY_0838
NC_007606.1	RefSeq	CDS	782376	783008	.	-	0	ID=cds730;Parent=gene817;Dbxref=Genbank:YP_402509.1,GeneID:3799460;Name=YP_402509.1;Note=Code: O%3B COG: COG0625;gbkey=CDS;gene=yliJ;product=transferase;protein_id=YP_402509.1;transl_table=11
NC_007606.1	RefSeq	region	783224	783989	.	-	.	ID=id129;gbkey=mobile_element
NC_007606.1	RefSeq	gene	783238	783633	.	-	.	ID=gene818;Dbxref=GeneID:3799461;Name=SDY_0839;Note=SDY0839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0839
NC_007606.1	RefSeq	CDS	783238	783633	.	-	0	ID=cds731;Parent=gene818;Dbxref=Genbank:YP_402510.1,GeneID:3799461;Name=YP_402510.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402510.1;transl_table=11
NC_007606.1	RefSeq	gene	783660	783932	.	-	.	ID=gene819;Dbxref=GeneID:18262978;Name=SDY_0839a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0839a
NC_007606.1	RefSeq	CDS	783660	783932	.	-	0	ID=cds732;Parent=gene819;Dbxref=Genbank:YP_009000664.1,GeneID:18262978;Name=YP_009000664.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000664.1;transl_table=11
NC_007606.1	RefSeq	gene	784024	785226	.	+	.	ID=gene820;Dbxref=GeneID:3799463;Name=dacC;Note=SDY0841;gbkey=Gene;gene=dacC;gene_biotype=protein_coding;locus_tag=SDY_0841
NC_007606.1	RefSeq	CDS	784024	785226	.	+	0	ID=cds733;Parent=gene820;Dbxref=Genbank:YP_402512.1,GeneID:3799463;Name=YP_402512.1;Note=''penicillin-binding protein 6a%3B removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains'';gbkey=CDS;gene=dacC;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_402512.1;transl_table=11
NC_007606.1	RefSeq	gene	785273	786031	.	-	.	ID=gene821;Dbxref=GeneID:3799464;Name=deoR;Note=SDY0842;gbkey=Gene;gene=deoR;gene_biotype=protein_coding;locus_tag=SDY_0842
NC_007606.1	RefSeq	CDS	785273	786031	.	-	0	ID=cds734;Parent=gene821;Dbxref=Genbank:YP_402513.1,GeneID:3799464;Name=YP_402513.1;Note=Code: KG%3B COG: COG1349;gbkey=CDS;gene=deoR;product=DNA-binding transcriptional repressor DeoR;protein_id=YP_402513.1;transl_table=11
NC_007606.1	RefSeq	gene	786089	786685	.	-	.	ID=gene822;Dbxref=GeneID:3799465;Name=ybjG;Note=SDY0843;gbkey=Gene;gene=ybjG;gene_biotype=protein_coding;locus_tag=SDY_0843
NC_007606.1	RefSeq	CDS	786089	786685	.	-	0	ID=cds735;Parent=gene822;Dbxref=Genbank:YP_402514.1,GeneID:3799465;Name=YP_402514.1;Note=Code: I%3B COG: COG0671;gbkey=CDS;gene=ybjG;product=undecaprenyl pyrophosphate phosphatase;protein_id=YP_402514.1;transl_table=11
NC_007606.1	RefSeq	gene	786940	788202	.	+	.	ID=gene823;Dbxref=GeneID:3799466;Name=cmr;Note=SDY0844%3B contains in-frame stop codon%3B original product: proton motive force efflux pump;gbkey=Gene;gene=cmr;gene_biotype=pseudogene;locus_tag=SDY_0844;pseudo=true
NC_007606.1	RefSeq	region	788311	788443	.	+	.	ID=id130;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	788443	789691	.	+	.	ID=id131;gbkey=mobile_element
NC_007606.1	RefSeq	gene	788515	788817	.	+	.	ID=gene824;Dbxref=GeneID:3799467;Name=SDY_0845;Note=SDY0845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0845
NC_007606.1	RefSeq	CDS	788515	788817	.	+	0	ID=cds736;Parent=gene824;Dbxref=Genbank:YP_402515.1,GeneID:3799467;Name=YP_402515.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_402515.1;transl_table=11
NC_007606.1	RefSeq	gene	788862	789683	.	+	.	ID=gene825;Dbxref=GeneID:3799468;Name=SDY_0846;Note=SDY0846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0846
NC_007606.1	RefSeq	CDS	788862	789683	.	+	0	ID=cds737;Parent=gene825;Dbxref=Genbank:YP_402516.1,GeneID:3799468;Name=YP_402516.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS911 integrase core domain-containing protein;protein_id=YP_402516.1;transl_table=11
NC_007606.1	RefSeq	region	789687	790826	.	+	.	ID=id132;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	790070	790783	.	+	.	ID=gene826;Dbxref=GeneID:3799469;Name=SDY_0847;Note=SDY0847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0847
NC_007606.1	RefSeq	CDS	790070	790783	.	+	0	ID=cds738;Parent=gene826;Dbxref=Genbank:YP_402517.1,GeneID:3799469;Name=YP_402517.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402517.1;transl_table=11
NC_007606.1	RefSeq	gene	790780	791334	.	+	.	ID=gene827;Dbxref=GeneID:3799470;Name=SDY_0848;Note=SDY0848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0848
NC_007606.1	RefSeq	CDS	790780	791334	.	+	0	ID=cds739;Parent=gene827;Dbxref=Genbank:YP_402518.1,GeneID:3799470;Name=YP_402518.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402518.1;transl_table=11
NC_007606.1	RefSeq	gene	791514	794546	.	-	.	ID=gene828;Dbxref=GeneID:3799473;Name=ipaH_2;Note=SDY0851%3B contains IS600 insertion%3B original product: ipaH9.8 invasion plasmid antigen;gbkey=Gene;gene=ipaH_2;gene_biotype=pseudogene;locus_tag=SDY_0851;pseudo=true
NC_007606.1	RefSeq	region	792485	793750	.	+	.	ID=id133;gbkey=mobile_element;gene=ipaH_2
NC_007606.1	RefSeq	gene	792549	792851	.	+	.	ID=gene829;Dbxref=GeneID:3799471;Name=SDY_0849;Note=SDY0849;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0849
NC_007606.1	RefSeq	CDS	792549	792851	.	+	0	ID=cds740;Parent=gene829;Dbxref=Genbank:YP_402519.1,GeneID:3799471;Name=YP_402519.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402519.1;transl_table=11
NC_007606.1	RefSeq	gene	792992	793795	.	+	.	ID=gene830;Dbxref=GeneID:3799472;Name=SDY_0850;Note=SDY0850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0850
NC_007606.1	RefSeq	CDS	792992	793795	.	+	0	ID=cds741;Parent=gene830;Dbxref=Genbank:YP_402520.1,GeneID:3799472;Name=YP_402520.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402520.1;transl_table=11
NC_007606.1	RefSeq	gene	795138	799652	.	+	.	ID=gene831;Dbxref=GeneID:3799474;Name=yfaSR;Note=SDY0852;gbkey=Gene;gene=yfaSR;gene_biotype=protein_coding;locus_tag=SDY_0852
NC_007606.1	RefSeq	CDS	795138	799652	.	+	0	ID=cds742;Parent=gene831;Dbxref=Genbank:YP_402521.1,GeneID:3799474;Name=YP_402521.1;Note=Code: R%3B COG: COG2373;gbkey=CDS;gene=yfaSR;product=large extracellular alpha-helical protein;protein_id=YP_402521.1;transl_table=11
NC_007606.1	RefSeq	gene	799653	801302	.	+	.	ID=gene832;Dbxref=GeneID:3799475;Name=SDY_0853;Note=SDY0853;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0853
NC_007606.1	RefSeq	CDS	799653	801302	.	+	0	ID=cds743;Parent=gene832;Dbxref=Genbank:YP_402522.1,GeneID:3799475;Name=YP_402522.1;Note=Code: S%3B COG: COG5445;gbkey=CDS;product=hypothetical protein;protein_id=YP_402522.1;transl_table=11
NC_007606.1	RefSeq	gene	801307	802082	.	+	.	ID=gene833;Dbxref=GeneID:3799476;Name=SDY_0854;Note=SDY0854;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0854;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	802357	805206	.	+	.	ID=gene834;Dbxref=GeneID:3799652;Name=rcsC;Note=SDY0856;gbkey=Gene;gene=rcsC;gene_biotype=protein_coding;locus_tag=SDY_0856
NC_007606.1	RefSeq	CDS	802357	805206	.	+	0	ID=cds744;Parent=gene834;Dbxref=Genbank:YP_402525.2,GeneID:3799652;Name=YP_402525.2;Note=Code: T%3B COG: COG0642;gbkey=CDS;gene=rcsC;product=hybrid sensory kinase in two-component regulatory system with RcsB and YojN;protein_id=YP_402525.2;transl_table=11
NC_007606.1	RefSeq	gene	805406	806056	.	-	.	ID=gene835;Dbxref=GeneID:3799653;Name=rcsB;Note=SDY0857;gbkey=Gene;gene=rcsB;gene_biotype=protein_coding;locus_tag=SDY_0857
NC_007606.1	RefSeq	CDS	805406	806056	.	-	0	ID=cds745;Parent=gene835;Dbxref=Genbank:YP_402526.1,GeneID:3799653;Name=YP_402526.1;Note=two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division%3B probably phosphorylated by RcsC or RcsF;gbkey=CDS;gene=rcsB;product=transcriptional regulator RcsB;protein_id=YP_402526.1;transl_table=11
NC_007606.1	RefSeq	gene	806073	808745	.	-	.	ID=gene836;Dbxref=GeneID:3799654;Name=yojN;Note=SDY0858;gbkey=Gene;gene=yojN;gene_biotype=protein_coding;locus_tag=SDY_0858
NC_007606.1	RefSeq	CDS	806073	808745	.	-	0	ID=cds746;Parent=gene836;Dbxref=Genbank:YP_402527.1,GeneID:3799654;Name=YP_402527.1;Note=Code: T%3B COG: COG0642;gbkey=CDS;gene=yojN;product=phosphotransfer intermediate protein in two-component regulatory system with RcsBC;protein_id=YP_402527.1;transl_table=11
NC_007606.1	RefSeq	region	809167	809933	.	-	.	ID=id134;gbkey=mobile_element
NC_007606.1	RefSeq	gene	809182	809577	.	-	.	ID=gene837;Dbxref=GeneID:3799655;Name=SDY_0859;Note=SDY0859;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0859
NC_007606.1	RefSeq	CDS	809182	809577	.	-	0	ID=cds747;Parent=gene837;Dbxref=Genbank:YP_402528.1,GeneID:3799655;Name=YP_402528.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402528.1;transl_table=11
NC_007606.1	RefSeq	gene	809604	809876	.	-	.	ID=gene838;Dbxref=GeneID:18262979;Name=SDY_0861a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0861a
NC_007606.1	RefSeq	CDS	809604	809876	.	-	0	ID=cds748;Parent=gene838;Dbxref=Genbank:YP_009000665.1,GeneID:18262979;Name=YP_009000665.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000665.1;transl_table=11
NC_007606.1	RefSeq	gene	810258	811385	.	+	.	ID=gene839;Dbxref=GeneID:3799657;Name=ompC;Note=SDY0861;gbkey=Gene;gene=ompC;gene_biotype=protein_coding;locus_tag=SDY_0861
NC_007606.1	RefSeq	CDS	810258	811385	.	+	0	ID=cds749;Parent=gene839;Dbxref=Genbank:YP_402530.1,GeneID:3799657;Name=YP_402530.1;Note=allows for ions and hydrophilic solutes to cross the outer membrane;gbkey=CDS;gene=ompC;product=porin;protein_id=YP_402530.1;transl_table=11
NC_007606.1	RefSeq	gene	811497	812552	.	+	.	ID=gene840;Dbxref=GeneID:3799658;Name=yojL;Note=SDY0862;gbkey=Gene;gene=yojL;gene_biotype=protein_coding;locus_tag=SDY_0862
NC_007606.1	RefSeq	CDS	811497	812552	.	+	0	ID=cds750;Parent=gene840;Dbxref=Genbank:YP_402531.1,GeneID:3799658;Name=YP_402531.1;Note=catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine%3B involved in the maintenance and/or assembly of sulfur clusters%3B periplasmic lipoporotein anchored to the inner membrane%3B part of the thiamine pyrophosphate biosynthesis pathway;gbkey=CDS;gene=yojL;product=thiamine biosynthesis lipoprotein ApbE;protein_id=YP_402531.1;transl_table=11
NC_007606.1	RefSeq	gene	812626	813690	.	+	.	ID=gene841;Dbxref=GeneID:3799659;Name=ada;Note=SDY0863;gbkey=Gene;gene=ada;gene_biotype=protein_coding;locus_tag=SDY_0863
NC_007606.1	RefSeq	CDS	812626	813690	.	+	0	ID=cds751;Parent=gene841;Dbxref=Genbank:YP_402532.1,GeneID:3799659;Name=YP_402532.1;Note=Code: F%3B COG: COG2169;gbkey=CDS;gene=ada;product=O6-methylguanine-DNA methyltransferase;protein_id=YP_402532.1;transl_table=11
NC_007606.1	RefSeq	gene	813690	814340	.	+	.	ID=gene842;Dbxref=GeneID:3799660;Name=alkB;Note=SDY0864;gbkey=Gene;gene=alkB;gene_biotype=protein_coding;locus_tag=SDY_0864
NC_007606.1	RefSeq	CDS	813690	814340	.	+	0	ID=cds752;Parent=gene842;Dbxref=Genbank:YP_402533.1,GeneID:3799660;Name=YP_402533.1;Note=Code: L%3B COG: COG3145;gbkey=CDS;gene=alkB;product=DNA repair system specific for alkylated DNA;protein_id=YP_402533.1;transl_table=11
NC_007606.1	RefSeq	gene	814416	816059	.	+	.	ID=gene843;Dbxref=GeneID:3799661;Name=yojI;Note=SDY0865;gbkey=Gene;gene=yojI;gene_biotype=protein_coding;locus_tag=SDY_0865
NC_007606.1	RefSeq	CDS	814416	816059	.	+	0	ID=cds753;Parent=gene843;Dbxref=Genbank:YP_402534.1,GeneID:3799661;Name=YP_402534.1;Note=efflux pump for the antibacterial peptide microcin J25;gbkey=CDS;gene=yojI;product=multidrug transporter membrane protein/ATP-binding protein;protein_id=YP_402534.1;transl_table=11
NC_007606.1	RefSeq	gene	816277	817923	.	+	.	ID=gene844;Dbxref=GeneID:3799662;Name=yojH;Note=SDY0866;gbkey=Gene;gene=yojH;gene_biotype=protein_coding;locus_tag=SDY_0866
NC_007606.1	RefSeq	CDS	816277	817923	.	+	0	ID=cds754;Parent=gene844;Dbxref=Genbank:YP_402535.1,GeneID:3799662;Name=YP_402535.1;Note=malate dehydrogenase%3B catalyzes the oxidation of malate to oxaloacetate;gbkey=CDS;gene=yojH;product=malate:quinone oxidoreductase;protein_id=YP_402535.1;transl_table=11
NC_007606.1	RefSeq	gene	818619	819395	.	-	.	ID=gene845;Dbxref=GeneID:3799663;Name=SDY_0867;Note=SDY0867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0867
NC_007606.1	RefSeq	CDS	818619	819395	.	-	0	ID=cds755;Parent=gene845;Dbxref=Genbank:YP_402536.1,GeneID:3799663;Name=YP_402536.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402536.1;transl_table=11
NC_007606.1	RefSeq	region	818637	819902	.	-	.	ID=id135;gbkey=mobile_element
NC_007606.1	RefSeq	gene	819536	819838	.	-	.	ID=gene846;Dbxref=GeneID:3799664;Name=SDY_0868;Note=SDY0868;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0868
NC_007606.1	RefSeq	CDS	819536	819838	.	-	0	ID=cds756;Parent=gene846;Dbxref=Genbank:YP_402537.1,GeneID:3799664;Name=YP_402537.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402537.1;transl_table=11
NC_007606.1	RefSeq	gene	820463	820957	.	+	.	ID=gene847;Dbxref=GeneID:3799666;Name=napF;Note=SDY0870;gbkey=Gene;gene=napF;gene_biotype=protein_coding;locus_tag=SDY_0870
NC_007606.1	RefSeq	CDS	820463	820957	.	+	0	ID=cds757;Parent=gene847;Dbxref=Genbank:YP_402538.1,GeneID:3799666;Name=YP_402538.1;Note=Predicted role in electron transfer to the periplasmic nitrate reductase NapA.;gbkey=CDS;gene=napF;product=ferredoxin-type protein;protein_id=YP_402538.1;transl_table=11
NC_007606.1	RefSeq	gene	820947	821210	.	+	.	ID=gene848;Dbxref=GeneID:3799667;Name=napD;Note=SDY0871;gbkey=Gene;gene=napD;gene_biotype=protein_coding;locus_tag=SDY_0871
NC_007606.1	RefSeq	CDS	820947	821210	.	+	0	ID=cds758;Parent=gene848;Dbxref=Genbank:YP_402539.1,GeneID:3799667;Name=YP_402539.1;Note=Code: P%3B COG: COG3062;gbkey=CDS;gene=napD;product=assembly protein for periplasmic nitrate reductase;protein_id=YP_402539.1;transl_table=11
NC_007606.1	RefSeq	gene	821207	823693	.	+	.	ID=gene849;Dbxref=GeneID:3799668;Name=napA;Note=SDY0872;gbkey=Gene;gene=napA;gene_biotype=protein_coding;locus_tag=SDY_0872
NC_007606.1	RefSeq	CDS	821207	823693	.	+	0	ID=cds759;Parent=gene849;Dbxref=Genbank:YP_402540.1,GeneID:3799668;Name=YP_402540.1;Note=periplasmic%3B catalytic subunit%3B with NapBC catalyzes the reduction of nitrate to nitrite%3B NapAB receives electrons from NapC;gbkey=CDS;gene=napA;product=nitrate reductase catalytic subunit;protein_id=YP_402540.1;transl_table=11
NC_007606.1	RefSeq	gene	823700	824395	.	+	.	ID=gene850;Dbxref=GeneID:3799669;Name=napG;Note=SDY0873;gbkey=Gene;gene=napG;gene_biotype=protein_coding;locus_tag=SDY_0873
NC_007606.1	RefSeq	CDS	823700	824395	.	+	0	ID=cds760;Parent=gene850;Dbxref=Genbank:YP_402541.1,GeneID:3799669;Name=YP_402541.1;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA%3B secreted by twin arginine translocation pathway;gbkey=CDS;gene=napG;product=quinol dehydrogenase periplasmic subunit;protein_id=YP_402541.1;transl_table=11
NC_007606.1	RefSeq	gene	824382	825245	.	+	.	ID=gene851;Dbxref=GeneID:3799670;Name=napH;Note=SDY0874;gbkey=Gene;gene=napH;gene_biotype=protein_coding;locus_tag=SDY_0874
NC_007606.1	RefSeq	CDS	824382	825245	.	+	0	ID=cds761;Parent=gene851;Dbxref=Genbank:YP_402542.1,GeneID:3799670;Name=YP_402542.1;Note=part of NapHG quinol dehydrogenase%3B couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA;gbkey=CDS;gene=napH;product=quinol dehydrogenase membrane subunit;protein_id=YP_402542.1;transl_table=11
NC_007606.1	RefSeq	gene	825242	825691	.	+	.	ID=gene852;Dbxref=GeneID:3799671;Name=napB;Note=SDY0875;gbkey=Gene;gene=napB;gene_biotype=protein_coding;locus_tag=SDY_0875
NC_007606.1	RefSeq	CDS	825242	825691	.	+	0	ID=cds762;Parent=gene852;Dbxref=Genbank:YP_402543.2,GeneID:3799671;Name=YP_402543.2;Note=small subunit of periplasmic nitrate reductase%3B receives electrons from the membrane-bound NapC and passes them to NapA;gbkey=CDS;gene=napB;product=citrate reductase cytochrome c-type subunit;protein_id=YP_402543.2;transl_table=11
NC_007606.1	RefSeq	gene	825701	826303	.	+	.	ID=gene853;Dbxref=GeneID:3796881;Name=napC;Note=SDY0876;gbkey=Gene;gene=napC;gene_biotype=protein_coding;locus_tag=SDY_0876
NC_007606.1	RefSeq	CDS	825701	826303	.	+	0	ID=cds763;Parent=gene853;Dbxref=Genbank:YP_402544.1,GeneID:3796881;Name=YP_402544.1;Note=with NapABDFGH functions as a nitrate reductase%3B NapC functions as an electron shuttle between NapAB and NapGH or quinone;gbkey=CDS;gene=napC;product=cytochrome c-type protein NapC;protein_id=YP_402544.1;transl_table=11
NC_007606.1	RefSeq	gene	826322	826939	.	+	.	ID=gene854;Dbxref=GeneID:3796882;Name=ccmA;Note=SDY0877;gbkey=Gene;gene=ccmA;gene_biotype=protein_coding;locus_tag=SDY_0877
NC_007606.1	RefSeq	CDS	826322	826939	.	+	0	ID=cds764;Parent=gene854;Dbxref=Genbank:YP_402545.1,GeneID:3796882;Name=YP_402545.1;Note=ATP-binding protein%3B required for proper cytochrome c maturation;gbkey=CDS;gene=ccmA;product=cytochrome c biogenesis protein CcmA;protein_id=YP_402545.1;transl_table=11
NC_007606.1	RefSeq	gene	826936	827598	.	+	.	ID=gene855;Dbxref=GeneID:3796883;Name=ccmB;Note=SDY0878;gbkey=Gene;gene=ccmB;gene_biotype=protein_coding;locus_tag=SDY_0878
NC_007606.1	RefSeq	CDS	826936	827598	.	+	0	ID=cds765;Parent=gene855;Dbxref=Genbank:YP_402546.1,GeneID:3796883;Name=YP_402546.1;Note=Code: O%3B COG: COG2386;gbkey=CDS;gene=ccmB;product=heme exporter protein B;protein_id=YP_402546.1;transl_table=11
NC_007606.1	RefSeq	gene	827640	828377	.	+	.	ID=gene856;Dbxref=GeneID:3796884;Name=ccmC;Note=SDY0879;gbkey=Gene;gene=ccmC;gene_biotype=protein_coding;locus_tag=SDY_0879
NC_007606.1	RefSeq	CDS	827640	828377	.	+	0	ID=cds766;Parent=gene856;Dbxref=Genbank:YP_402547.1,GeneID:3796884;Name=YP_402547.1;Note=Code: O%3B COG: COG0755;gbkey=CDS;gene=ccmC;product=heme exporter protein C;protein_id=YP_402547.1;transl_table=11
NC_007606.1	RefSeq	gene	828374	828583	.	+	.	ID=gene857;Dbxref=GeneID:3796885;Name=ccmD;Note=SDY0880;gbkey=Gene;gene=ccmD;gene_biotype=protein_coding;locus_tag=SDY_0880
NC_007606.1	RefSeq	CDS	828374	828583	.	+	0	ID=cds767;Parent=gene857;Dbxref=Genbank:YP_402548.1,GeneID:3796885;Name=YP_402548.1;Note=Code: U%3B COG: COG3114;gbkey=CDS;gene=ccmD;product=heme exporter protein C;protein_id=YP_402548.1;transl_table=11
NC_007606.1	RefSeq	gene	828580	829059	.	+	.	ID=gene858;Dbxref=GeneID:3796886;Name=ccmE;Note=SDY0881;gbkey=Gene;gene=ccmE;gene_biotype=protein_coding;locus_tag=SDY_0881
NC_007606.1	RefSeq	CDS	828580	829059	.	+	0	ID=cds768;Parent=gene858;Dbxref=Genbank:YP_402549.1,GeneID:3796886;Name=YP_402549.1;Note=CycJ%3B periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes%3B requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome%3B part of the cytochrome c maturation system%3B periplasmic protein anchored to the inner membrane;gbkey=CDS;gene=ccmE;product=cytochrome c-type biogenesis protein CcmE;protein_id=YP_402549.1;transl_table=11
NC_007606.1	RefSeq	gene	829056	830999	.	+	.	ID=gene859;Dbxref=GeneID:3796887;Name=ccmF;Note=SDY0882;gbkey=Gene;gene=ccmF;gene_biotype=protein_coding;locus_tag=SDY_0882
NC_007606.1	RefSeq	CDS	829056	830999	.	+	0	ID=cds769;Parent=gene859;Dbxref=Genbank:YP_402550.1,GeneID:3796887;Name=YP_402550.1;Note=Code: O%3B COG: COG1138;gbkey=CDS;gene=ccmF;product=cytochrome c-type biogenesis protein;protein_id=YP_402550.1;transl_table=11
NC_007606.1	RefSeq	gene	830996	831553	.	+	.	ID=gene860;Dbxref=GeneID:3796888;Name=dsbE;Note=SDY0883;gbkey=Gene;gene=dsbE;gene_biotype=protein_coding;locus_tag=SDY_0883
NC_007606.1	RefSeq	CDS	830996	831553	.	+	0	ID=cds770;Parent=gene860;Dbxref=Genbank:YP_402551.1,GeneID:3796888;Name=YP_402551.1;Note=Code: OC%3B COG: COG0526;gbkey=CDS;gene=dsbE;product=disulfide oxidoreductase;protein_id=YP_402551.1;transl_table=11
NC_007606.1	RefSeq	gene	831550	832602	.	+	.	ID=gene861;Dbxref=GeneID:3796889;Name=ccmH;Note=SDY0884;gbkey=Gene;gene=ccmH;gene_biotype=protein_coding;locus_tag=SDY_0884
NC_007606.1	RefSeq	CDS	831550	832602	.	+	0	ID=cds771;Parent=gene861;Dbxref=Genbank:YP_402552.1,GeneID:3796889;Name=YP_402552.1;Note=Code: O%3B COG: COG4235;gbkey=CDS;gene=ccmH;product=subunit of heme lyase;protein_id=YP_402552.1;transl_table=11
NC_007606.1	RefSeq	gene	832813	833460	.	-	.	ID=gene862;Dbxref=GeneID:3796890;Name=narP;Note=SDY0885;gbkey=Gene;gene=narP;gene_biotype=protein_coding;locus_tag=SDY_0885
NC_007606.1	RefSeq	CDS	832813	833460	.	-	0	ID=cds772;Parent=gene862;Dbxref=Genbank:YP_402553.1,GeneID:3796890;Name=YP_402553.1;Note=nitrate/nitrite response regulator NarP%3B NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems%3B represses expression of other anaerobic genes;gbkey=CDS;gene=narP;product=transcriptional regulator NarP;protein_id=YP_402553.1;transl_table=11
NC_007606.1	RefSeq	region	834075	834840	.	-	.	ID=id136;gbkey=mobile_element
NC_007606.1	RefSeq	gene	834089	834484	.	-	.	ID=gene863;Dbxref=GeneID:3796891;Name=SDY_0886;Note=SDY0886;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0886
NC_007606.1	RefSeq	CDS	834089	834484	.	-	0	ID=cds773;Parent=gene863;Dbxref=Genbank:YP_402554.1,GeneID:3796891;Name=YP_402554.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402554.1;transl_table=11
NC_007606.1	RefSeq	gene	834511	834783	.	-	.	ID=gene864;Dbxref=GeneID:18262980;Name=SDY_0886a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0886a
NC_007606.1	RefSeq	CDS	834511	834783	.	-	0	ID=cds774;Parent=gene864;Dbxref=Genbank:YP_009000666.1,GeneID:18262980;Name=YP_009000666.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000666.1;transl_table=11
NC_007606.1	RefSeq	region	834953	835715	.	-	.	ID=id137;gbkey=mobile_element
NC_007606.1	RefSeq	gene	835389	835664	.	-	.	ID=gene865;Dbxref=GeneID:3796893;Name=insA;Note=SDY0888;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0888
NC_007606.1	RefSeq	CDS	835389	835664	.	-	0	ID=cds775;Parent=gene865;Dbxref=Genbank:YP_402556.1,GeneID:3796893;Name=YP_402556.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402556.1;transl_table=11
NC_007606.1	RefSeq	gene	835867	837921	.	+	.	ID=gene866;Dbxref=GeneID:3796894;Name=yejO;Note=SDY0889;gbkey=Gene;gene=yejO;gene_biotype=protein_coding;locus_tag=SDY_0889
NC_007606.1	RefSeq	CDS	835867	837921	.	+	0	ID=cds776;Parent=gene866;Dbxref=Genbank:YP_402557.1,GeneID:3796894;Name=YP_402557.1;Note=Code: MU%3B COG: COG3468;gbkey=CDS;gene=yejO;product=ATPase;protein_id=YP_402557.1;transl_table=11
NC_007606.1	RefSeq	gene	838023	838099	.	-	.	ID=gene867;Dbxref=GeneID:3796895;Name=SDY_0890;Note=SDY0890;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0890
NC_007606.1	RefSeq	tRNA	838023	838099	.	-	.	ID=rna22;Parent=gene867;Dbxref=GeneID:3796895;codons=21;gbkey=tRNA;product=tRNA-Pro
NC_007606.1	RefSeq	exon	838023	838099	.	-	.	ID=id138;Parent=rna22;Dbxref=GeneID:3796895;codons=21;gbkey=tRNA;product=tRNA-Pro
NC_007606.1	RefSeq	gene	838174	839934	.	-	.	ID=gene868;Dbxref=GeneID:3796896;Name=yejM;Note=SDY0891;gbkey=Gene;gene=yejM;gene_biotype=protein_coding;locus_tag=SDY_0891
NC_007606.1	RefSeq	CDS	838174	839934	.	-	0	ID=cds777;Parent=gene868;Dbxref=Genbank:YP_402558.1,GeneID:3796896;Name=YP_402558.1;Note=Code: R%3B COG: COG3083;gbkey=CDS;gene=yejM;product=sulfatase;protein_id=YP_402558.1;transl_table=11
NC_007606.1	RefSeq	gene	839954	840181	.	-	.	ID=gene869;Dbxref=GeneID:3796897;Name=yejL;Note=SDY0892;gbkey=Gene;gene=yejL;gene_biotype=protein_coding;locus_tag=SDY_0892
NC_007606.1	RefSeq	CDS	839954	840181	.	-	0	ID=cds778;Parent=gene869;Dbxref=Genbank:YP_402559.1,GeneID:3796897;Name=YP_402559.1;Note=Code: S%3B COG: COG3082;gbkey=CDS;gene=yejL;product=hypothetical protein;protein_id=YP_402559.1;transl_table=11
NC_007606.1	RefSeq	gene	840363	841370	.	+	.	ID=gene870;Dbxref=GeneID:3796898;Name=yejK;Note=SDY0893;gbkey=Gene;gene=yejK;gene_biotype=protein_coding;locus_tag=SDY_0893
NC_007606.1	RefSeq	CDS	840363	841370	.	+	0	ID=cds779;Parent=gene870;Dbxref=Genbank:YP_402560.1,GeneID:3796898;Name=YP_402560.1;Note=Code: R%3B COG: COG3081;gbkey=CDS;gene=yejK;product=nucleoid-associated protein NdpA;protein_id=YP_402560.1;transl_table=11
NC_007606.1	RefSeq	gene	841509	841793	.	-	.	ID=gene871;Dbxref=GeneID:3799304;Name=rplY;Note=SDY0894;gbkey=Gene;gene=rplY;gene_biotype=protein_coding;locus_tag=SDY_0894
NC_007606.1	RefSeq	CDS	841509	841793	.	-	0	ID=cds780;Parent=gene871;Dbxref=Genbank:YP_402561.1,GeneID:3799304;Name=YP_402561.1;Note=''the Ctc family of proteins consists of two types%2C one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response'';gbkey=CDS;gene=rplY;product=50S ribosomal protein L25;protein_id=YP_402561.1;transl_table=11
NC_007606.1	RefSeq	gene	841918	843678	.	-	.	ID=gene872;Dbxref=GeneID:3799305;Name=yejH;Note=SDY0895;gbkey=Gene;gene=yejH;gene_biotype=protein_coding;locus_tag=SDY_0895
NC_007606.1	RefSeq	CDS	841918	843678	.	-	0	ID=cds781;Parent=gene872;Dbxref=Genbank:YP_402562.1,GeneID:3799305;Name=YP_402562.1;Note=Code: KL%3B COG: COG1061;gbkey=CDS;gene=yejH;product=ATP-dependent helicase;protein_id=YP_402562.1;transl_table=11
NC_007606.1	RefSeq	gene	843828	844523	.	+	.	ID=gene873;Dbxref=GeneID:3799306;Name=rsuA;Note=SDY0896;gbkey=Gene;gene=rsuA;gene_biotype=protein_coding;locus_tag=SDY_0896
NC_007606.1	RefSeq	CDS	843828	844523	.	+	0	ID=cds782;Parent=gene873;Dbxref=Genbank:YP_402563.1,GeneID:3799306;Name=YP_402563.1;Note=catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA;gbkey=CDS;gene=rsuA;product=16S rRNA pseudouridylate synthase A;protein_id=YP_402563.1;transl_table=11
NC_007606.1	RefSeq	gene	844551	845741	.	+	.	ID=gene874;Dbxref=GeneID:3799307;Name=bcr;Note=SDY0897;gbkey=Gene;gene=bcr;gene_biotype=protein_coding;locus_tag=SDY_0897
NC_007606.1	RefSeq	CDS	844551	845741	.	+	0	ID=cds783;Parent=gene874;Dbxref=Genbank:YP_402564.1,GeneID:3799307;Name=YP_402564.1;Note=Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance;gbkey=CDS;gene=bcr;product=bicyclomycin/multidrug efflux system protein;protein_id=YP_402564.1;transl_table=11
NC_007606.1	RefSeq	gene	846074	846418	.	+	.	ID=gene875;Dbxref=GeneID:3799308;Name=yejG;Note=SDY0898;gbkey=Gene;gene=yejG;gene_biotype=protein_coding;locus_tag=SDY_0898
NC_007606.1	RefSeq	CDS	846074	846418	.	+	0	ID=cds784;Parent=gene875;Dbxref=Genbank:YP_402565.1,GeneID:3799308;Name=YP_402565.1;gbkey=CDS;gene=yejG;product=hypothetical protein;protein_id=YP_402565.1;transl_table=11
NC_007606.1	RefSeq	gene	846422	848011	.	-	.	ID=gene876;Dbxref=GeneID:3799309;Name=yejF;Note=SDY0899;gbkey=Gene;gene=yejF;gene_biotype=protein_coding;locus_tag=SDY_0899
NC_007606.1	RefSeq	CDS	846422	848011	.	-	0	ID=cds785;Parent=gene876;Dbxref=Genbank:YP_402566.1,GeneID:3799309;Name=YP_402566.1;Note=Code: R%3B COG: COG4172;gbkey=CDS;gene=yejF;product=ATPase;protein_id=YP_402566.1;transl_table=11
NC_007606.1	RefSeq	gene	848013	849038	.	-	.	ID=gene877;Dbxref=GeneID:3799310;Name=yejE;Note=SDY0900;gbkey=Gene;gene=yejE;gene_biotype=protein_coding;locus_tag=SDY_0900
NC_007606.1	RefSeq	CDS	848013	849038	.	-	0	ID=cds786;Parent=gene877;Dbxref=Genbank:YP_402567.1,GeneID:3799310;Name=YP_402567.1;Note=Code: R%3B COG: COG4239;gbkey=CDS;gene=yejE;product=transport system permease;protein_id=YP_402567.1;transl_table=11
NC_007606.1	RefSeq	gene	849038	850132	.	-	.	ID=gene878;Dbxref=GeneID:3799311;Name=yejB;Note=SDY0901;gbkey=Gene;gene=yejB;gene_biotype=protein_coding;locus_tag=SDY_0901
NC_007606.1	RefSeq	CDS	849038	850132	.	-	0	ID=cds787;Parent=gene878;Dbxref=Genbank:YP_402568.1,GeneID:3799311;Name=YP_402568.1;Note=Code: R%3B COG: COG4174;gbkey=CDS;gene=yejB;product=transport system permease;protein_id=YP_402568.1;transl_table=11
NC_007606.1	RefSeq	gene	850133	851947	.	-	.	ID=gene879;Dbxref=GeneID:3799312;Name=yejA;Note=SDY0902;gbkey=Gene;gene=yejA;gene_biotype=protein_coding;locus_tag=SDY_0902
NC_007606.1	RefSeq	CDS	850133	851947	.	-	0	ID=cds788;Parent=gene879;Dbxref=Genbank:YP_402569.2,GeneID:3799312;Name=YP_402569.2;Note=Code: E%3B COG: COG4166;gbkey=CDS;gene=yejA;product=hypothetical protein;protein_id=YP_402569.2;transl_table=11
NC_007606.1	RefSeq	gene	852029	853585	.	-	.	ID=gene880;Dbxref=GeneID:3799313;Name=rtn;Note=SDY0903;gbkey=Gene;gene=rtn;gene_biotype=protein_coding;locus_tag=SDY_0903
NC_007606.1	RefSeq	CDS	852029	853585	.	-	0	ID=cds789;Parent=gene880;Dbxref=Genbank:YP_402570.1,GeneID:3799313;Name=YP_402570.1;Note=Code: T%3B COG: COG2200;gbkey=CDS;gene=rtn;product=hypothetical protein;protein_id=YP_402570.1;transl_table=11
NC_007606.1	RefSeq	gene	853766	854332	.	-	.	ID=gene881;Dbxref=GeneID:3799314;Name=spr;Note=SDY0904;gbkey=Gene;gene=spr;gene_biotype=protein_coding;locus_tag=SDY_0904
NC_007606.1	RefSeq	CDS	853766	854332	.	-	0	ID=cds790;Parent=gene881;Dbxref=Genbank:YP_402571.1,GeneID:3799314;Name=YP_402571.1;Note=''by similarity%2C Spr seems to have peptidase activity%3B involved in thermoresistance'';gbkey=CDS;gene=spr;product=outer membrane lipoprotein;protein_id=YP_402571.1;transl_table=11
NC_007606.1	RefSeq	gene	854744	855493	.	-	.	ID=gene882;Dbxref=GeneID:3799315;Name=SDY_0905;Note=SDY0905;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0905
NC_007606.1	RefSeq	CDS	854744	855493	.	-	0	ID=cds791;Parent=gene882;Dbxref=Genbank:YP_402572.1,GeneID:3799315;Name=YP_402572.1;Note=Code: I%3B COG: COG0671;gbkey=CDS;product=hypothetical protein;protein_id=YP_402572.1;transl_table=11
NC_007606.1	RefSeq	gene	855496	856482	.	-	.	ID=gene883;Dbxref=GeneID:3799316;Name=yeiR;Note=SDY0906;gbkey=Gene;gene=yeiR;gene_biotype=protein_coding;locus_tag=SDY_0906
NC_007606.1	RefSeq	CDS	855496	856482	.	-	0	ID=cds792;Parent=gene883;Dbxref=Genbank:YP_402573.1,GeneID:3799316;Name=YP_402573.1;Note=Code: R%3B COG: COG0523;gbkey=CDS;gene=yeiR;product=hypothetical protein;protein_id=YP_402573.1;transl_table=11
NC_007606.1	RefSeq	gene	856600	858066	.	-	.	ID=gene884;Dbxref=GeneID:3799317;Name=yeiQ;Note=SDY0907;gbkey=Gene;gene=yeiQ;gene_biotype=pseudogene;locus_tag=SDY_0907;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	858289	858861	.	-	.	ID=gene885;Dbxref=GeneID:3799318;Name=yeiP;Note=SDY0908;gbkey=Gene;gene=yeiP;gene_biotype=protein_coding;locus_tag=SDY_0908
NC_007606.1	RefSeq	CDS	858289	858861	.	-	0	ID=cds793;Parent=gene885;Dbxref=Genbank:YP_402575.2,GeneID:3799318;Name=YP_402575.2;Note=''Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro%2C suggesting its involvement in the formation of the first peptide bond of a protein'';gbkey=CDS;gene=yeiP;product=elongation factor P;protein_id=YP_402575.2;transl_table=11
NC_007606.1	RefSeq	gene	859016	859270	.	+	.	ID=gene886;Dbxref=GeneID:18262981;Name=SDY_0907a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0907a
NC_007606.1	RefSeq	CDS	859016	859270	.	+	0	ID=cds794;Parent=gene886;Dbxref=Genbank:YP_009000667.1,GeneID:18262981;Name=YP_009000667.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_009000667.1;transl_table=11
NC_007606.1	RefSeq	gene	859267	860448	.	-	.	ID=gene887;Dbxref=GeneID:3799319;Name=yeiO;Note=SDY0909;gbkey=Gene;gene=yeiO;gene_biotype=protein_coding;locus_tag=SDY_0909
NC_007606.1	RefSeq	CDS	859267	860448	.	-	0	ID=cds795;Parent=gene887;Dbxref=Genbank:YP_402576.1,GeneID:3799319;Name=YP_402576.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=yeiO;product=transporter;protein_id=YP_402576.1;transl_table=11
NC_007606.1	RefSeq	region	860574	861338	.	-	.	ID=id139;gbkey=mobile_element
NC_007606.1	RefSeq	gene	860588	860803	.	-	.	ID=gene888;Dbxref=GeneID:3799320;Name=SDY_0910;Note=SDY0910;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0910
NC_007606.1	RefSeq	CDS	860588	860803	.	-	0	ID=cds796;Parent=gene888;Dbxref=Genbank:YP_402577.1,GeneID:3799320;Name=YP_402577.1;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402577.1;transl_table=11
NC_007606.1	RefSeq	gene	861009	861281	.	-	.	ID=gene889;Dbxref=GeneID:18262982;Name=SDY_0912a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0912a
NC_007606.1	RefSeq	CDS	861009	861281	.	-	0	ID=cds797;Parent=gene889;Dbxref=Genbank:YP_009000668.1,GeneID:18262982;Name=YP_009000668.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000668.1;transl_table=11
NC_007606.1	RefSeq	region	861339	861546	.	+	.	ID=id140;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	861552	862385	.	+	.	ID=gene890;Dbxref=GeneID:3799322;Name=SDY_0912;Note=SDY0912;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0912
NC_007606.1	RefSeq	CDS	861552	862385	.	+	0	ID=cds798;Parent=gene890;Dbxref=Genbank:YP_402579.1,GeneID:3799322;Name=YP_402579.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402579.1;transl_table=11
NC_007606.1	RefSeq	region	862424	863189	.	+	.	ID=id141;gbkey=mobile_element
NC_007606.1	RefSeq	gene	862481	862753	.	+	.	ID=gene891;Dbxref=GeneID:18262983;Name=SDY_0913a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0913a
NC_007606.1	RefSeq	CDS	862481	862753	.	+	0	ID=cds799;Parent=gene891;Dbxref=Genbank:YP_009000669.1,GeneID:18262983;Name=YP_009000669.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000669.1;transl_table=11
NC_007606.1	RefSeq	gene	862959	863174	.	+	.	ID=gene892;Dbxref=GeneID:3799323;Name=SDY_0913;Note=SDY0913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0913
NC_007606.1	RefSeq	CDS	862959	863174	.	+	0	ID=cds800;Parent=gene892;Dbxref=Genbank:YP_402580.1,GeneID:3799323;Name=YP_402580.1;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402580.1;transl_table=11
NC_007606.1	RefSeq	gene	863152	864219	.	+	.	ID=gene893;Dbxref=GeneID:3799615;Name=SDY_0914;Note=SDY0914;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0914
NC_007606.1	RefSeq	CDS	863152	864219	.	+	0	ID=cds801;Parent=gene893;Dbxref=Genbank:YP_402581.1,GeneID:3799615;Name=YP_402581.1;Note=Code: NU%3B COG: COG3539;gbkey=CDS;product=FimH-like protein;protein_id=YP_402581.1;transl_table=11
NC_007606.1	RefSeq	gene	864263	864772	.	+	.	ID=gene894;Dbxref=GeneID:3799616;Name=SDY_0915;Note=SDY0915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0915
NC_007606.1	RefSeq	CDS	864263	864772	.	+	0	ID=cds802;Parent=gene894;Dbxref=Genbank:YP_402582.1,GeneID:3799616;Name=YP_402582.1;Note=Code: NU%3B COG: COG3539;gbkey=CDS;product=fimbrial-like protein;protein_id=YP_402582.1;transl_table=11
NC_007606.1	RefSeq	gene	864732	865295	.	+	.	ID=gene895;Dbxref=GeneID:3799617;Name=SDY_0916;Note=SDY0916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0916
NC_007606.1	RefSeq	CDS	864732	865295	.	+	0	ID=cds803;Parent=gene895;Dbxref=Genbank:YP_402583.1,GeneID:3799617;Name=YP_402583.1;Note=Code: NU%3B COG: COG3539;gbkey=CDS;product=fimbrial-like protein;protein_id=YP_402583.1;transl_table=11
NC_007606.1	RefSeq	gene	865261	865998	.	+	.	ID=gene896;Dbxref=GeneID:3799618;Name=ycbF;Note=SDY0917;gbkey=Gene;gene=ycbF;gene_biotype=protein_coding;locus_tag=SDY_0917
NC_007606.1	RefSeq	CDS	865261	865998	.	+	0	ID=cds804;Parent=gene896;Dbxref=Genbank:YP_402584.1,GeneID:3799618;Name=YP_402584.1;Note=Code: NU%3B COG: COG3121;gbkey=CDS;gene=ycbF;product=pili assembly chaperone;protein_id=YP_402584.1;transl_table=11
NC_007606.1	RefSeq	gene	866109	867119	.	+	.	ID=gene897;Dbxref=GeneID:3799619;Name=pyrD;Note=SDY0918;gbkey=Gene;gene=pyrD;gene_biotype=protein_coding;locus_tag=SDY_0918
NC_007606.1	RefSeq	CDS	866109	867119	.	+	0	ID=cds805;Parent=gene897;Dbxref=Genbank:YP_402585.1,GeneID:3799619;Name=YP_402585.1;Note=''catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway%3B uses a flavin nucleotide as an essential cofactor%3B class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus%2C which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors'';gbkey=CDS;gene=pyrD;product=dihydroorotate dehydrogenase 2;protein_id=YP_402585.1;transl_table=11
NC_007606.1	RefSeq	gene	867257	867835	.	+	.	ID=gene898;Dbxref=GeneID:3799620;Name=ycbW;Note=SDY0919;gbkey=Gene;gene=ycbW;gene_biotype=protein_coding;locus_tag=SDY_0919
NC_007606.1	RefSeq	CDS	867257	867835	.	+	0	ID=cds806;Parent=gene898;Dbxref=Genbank:YP_402586.1,GeneID:3799620;Name=YP_402586.1;gbkey=CDS;gene=ycbW;product=hypothetical protein;protein_id=YP_402586.1;transl_table=11
NC_007606.1	RefSeq	gene	867832	868941	.	-	.	ID=gene899;Dbxref=GeneID:3799621;Name=SDY_0920;Note=SDY0920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0920
NC_007606.1	RefSeq	CDS	867832	868941	.	-	0	ID=cds807;Parent=gene899;Dbxref=Genbank:YP_402587.1,GeneID:3799621;Name=YP_402587.1;Note=Code: R%3B COG: COG3217;gbkey=CDS;product=hypothetical protein;protein_id=YP_402587.1;transl_table=11
NC_007606.1	RefSeq	gene	869185	871293	.	+	.	ID=gene900;Dbxref=GeneID:3799622;Name=rlmL;Note=SDY0921;gbkey=Gene;gene=rlmL;gene_biotype=protein_coding;locus_tag=SDY_0921
NC_007606.1	RefSeq	CDS	869185	871293	.	+	0	ID=cds808;Parent=gene900;Dbxref=Genbank:YP_402588.1,GeneID:3799622;Name=YP_402588.1;Note=catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA;gbkey=CDS;gene=rlmL;product=23S rRNA m(2)G2445 methyltransferase;protein_id=YP_402588.1;transl_table=11
NC_007606.1	RefSeq	gene	871305	873212	.	+	.	ID=gene901;Dbxref=GeneID:3799623;Name=uup;Note=SDY0922;gbkey=Gene;gene=uup;gene_biotype=protein_coding;locus_tag=SDY_0922
NC_007606.1	RefSeq	CDS	871305	873212	.	+	0	ID=cds809;Parent=gene901;Dbxref=Genbank:YP_402589.1,GeneID:3799623;Name=YP_402589.1;Note=Uup%3B in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity%3B mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth;gbkey=CDS;gene=uup;product=ABC transporter ATPase;protein_id=YP_402589.1;transl_table=11
NC_007606.1	RefSeq	gene	873342	874595	.	+	.	ID=gene902;Dbxref=GeneID:3799624;Name=pqiA;Note=SDY0923;gbkey=Gene;gene=pqiA;gene_biotype=protein_coding;locus_tag=SDY_0923
NC_007606.1	RefSeq	CDS	873342	874595	.	+	0	ID=cds810;Parent=gene902;Dbxref=Genbank:YP_402590.1,GeneID:3799624;Name=YP_402590.1;Note=Code: S%3B COG: COG2995;gbkey=CDS;gene=pqiA;product=paraquat-inducible protein A;protein_id=YP_402590.1;transl_table=11
NC_007606.1	RefSeq	gene	874600	876240	.	+	.	ID=gene903;Dbxref=GeneID:3799625;Name=pqiB;Note=SDY0924;gbkey=Gene;gene=pqiB;gene_biotype=protein_coding;locus_tag=SDY_0924
NC_007606.1	RefSeq	CDS	874600	876240	.	+	0	ID=cds811;Parent=gene903;Dbxref=Genbank:YP_402591.1,GeneID:3799625;Name=YP_402591.1;Note=Code: R%3B COG: COG3008;gbkey=CDS;gene=pqiB;product=paraquat-inducible protein B;protein_id=YP_402591.1;transl_table=11
NC_007606.1	RefSeq	gene	876252	876800	.	+	.	ID=gene904;Dbxref=GeneID:3799626;Name=ymbA;Note=SDY0925;gbkey=Gene;gene=ymbA;gene_biotype=protein_coding;locus_tag=SDY_0925
NC_007606.1	RefSeq	CDS	876252	876800	.	+	0	ID=cds812;Parent=gene904;Dbxref=Genbank:YP_402592.1,GeneID:3799626;Name=YP_402592.1;Note=Code: S%3B COG: COG3009;gbkey=CDS;gene=ymbA;product=hypothetical protein;protein_id=YP_402592.1;transl_table=11
NC_007606.1	RefSeq	gene	877056	877223	.	+	.	ID=gene905;Dbxref=GeneID:3799627;Name=rmf;Note=SDY0926;gbkey=Gene;gene=rmf;gene_biotype=protein_coding;locus_tag=SDY_0926
NC_007606.1	RefSeq	CDS	877056	877223	.	+	0	ID=cds813;Parent=gene905;Dbxref=Genbank:YP_402593.1,GeneID:3799627;Name=YP_402593.1;Note=Code: J%3B COG: COG3130;gbkey=CDS;gene=rmf;product=ribosome modulation factor;protein_id=YP_402593.1;transl_table=11
NC_007606.1	RefSeq	gene	877293	877811	.	-	.	ID=gene906;Dbxref=GeneID:3799628;Name=fabA;Note=SDY0927;gbkey=Gene;gene=fabA;gene_biotype=protein_coding;locus_tag=SDY_0927
NC_007606.1	RefSeq	CDS	877293	877811	.	-	0	ID=cds814;Parent=gene906;Dbxref=Genbank:YP_402594.1,GeneID:3799628;Name=YP_402594.1;Note=''catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2%2C3-decenoyl-ACP or 3%2C4-decenoyl-ACP'';gbkey=CDS;gene=fabA;product=3-hydroxydecanoyl-ACP dehydratase;protein_id=YP_402594.1;transl_table=11
NC_007606.1	RefSeq	gene	877880	879665	.	-	.	ID=gene907;Dbxref=GeneID:3799629;Name=SDY_0928;Note=SDY0928%3B frameshift%3B original product:  ATP-dependent protease;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0928;pseudo=true
NC_007606.1	RefSeq	gene	879851	880303	.	+	.	ID=gene908;Dbxref=GeneID:3799630;Name=ycbG;Note=SDY0929;gbkey=Gene;gene=ycbG;gene_biotype=protein_coding;locus_tag=SDY_0929
NC_007606.1	RefSeq	CDS	879851	880303	.	+	0	ID=cds815;Parent=gene908;Dbxref=Genbank:YP_402595.1,GeneID:3799630;Name=YP_402595.1;Note=Code: S%3B COG: COG3120;gbkey=CDS;gene=ycbG;product=hypothetical protein;protein_id=YP_402595.1;transl_table=11
NC_007606.1	RefSeq	gene	880379	881431	.	-	.	ID=gene909;Dbxref=GeneID:3799631;Name=ompA;Note=SDY0930;gbkey=Gene;gene=ompA;gene_biotype=protein_coding;locus_tag=SDY_0930
NC_007606.1	RefSeq	CDS	880379	881431	.	-	0	ID=cds816;Parent=gene909;Dbxref=Genbank:YP_402596.1,GeneID:3799631;Name=YP_402596.1;Note=''OmpA is believed to be a porin%2C involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli%2C and it is known to play a role as a phage receptor%2C a mediator of F-factor dependent conjugation%2C and in maintaining the structural shape of the outer membrane%3B 3a%3B II*%3B G%3B d'';gbkey=CDS;gene=ompA;product=outer membrane protein OmpA;protein_id=YP_402596.1;transl_table=11
NC_007606.1	RefSeq	region	882023	883288	.	+	.	ID=id142;gbkey=mobile_element
NC_007606.1	RefSeq	gene	882087	882389	.	+	.	ID=gene910;Dbxref=GeneID:3799632;Name=SDY_0931;Note=SDY0931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0931
NC_007606.1	RefSeq	CDS	882087	882389	.	+	0	ID=cds817;Parent=gene910;Dbxref=Genbank:YP_402597.1,GeneID:3799632;Name=YP_402597.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402597.1;transl_table=11
NC_007606.1	RefSeq	gene	882530	883315	.	+	.	ID=gene911;Dbxref=GeneID:3799633;Name=SDY_0932;Note=SDY0932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0932
NC_007606.1	RefSeq	CDS	882530	883315	.	+	0	ID=cds818;Parent=gene911;Dbxref=Genbank:YP_402598.1,GeneID:3799633;Name=YP_402598.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402598.1;transl_table=11
NC_007606.1	RefSeq	gene	883786	884415	.	+	.	ID=gene912;Dbxref=GeneID:3798487;Name=SDY_0934;Note=SDY0934;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0934
NC_007606.1	RefSeq	CDS	883786	884415	.	+	0	ID=cds819;Parent=gene912;Dbxref=Genbank:YP_402599.1,GeneID:3798487;Name=YP_402599.1;Note=Code: K%3B COG: COG3070;gbkey=CDS;product=hypothetical protein;protein_id=YP_402599.1;transl_table=11
NC_007606.1	RefSeq	gene	884378	886540	.	-	.	ID=gene913;Dbxref=GeneID:3798488;Name=SDY_0935;Note=SDY0935;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0935
NC_007606.1	RefSeq	CDS	884378	886540	.	-	0	ID=cds820;Parent=gene913;Dbxref=Genbank:YP_402600.1,GeneID:3798488;Name=YP_402600.1;Note=Code: S%3B COG: COG1289;gbkey=CDS;product=hypothetical protein;protein_id=YP_402600.1;transl_table=11
NC_007606.1	RefSeq	gene	886550	886996	.	-	.	ID=gene914;Dbxref=GeneID:3798489;Name=yccF;Note=SDY0936;gbkey=Gene;gene=yccF;gene_biotype=protein_coding;locus_tag=SDY_0936
NC_007606.1	RefSeq	CDS	886550	886996	.	-	0	ID=cds821;Parent=gene914;Dbxref=Genbank:YP_402601.1,GeneID:3798489;Name=YP_402601.1;Note=Code: S%3B COG: COG3304;gbkey=CDS;gene=yccF;product=hypothetical protein;protein_id=YP_402601.1;transl_table=11
NC_007606.1	RefSeq	gene	887119	889173	.	+	.	ID=gene915;Dbxref=GeneID:3798490;Name=helD;Note=SDY0937;gbkey=Gene;gene=helD;gene_biotype=protein_coding;locus_tag=SDY_0937
NC_007606.1	RefSeq	CDS	887119	889173	.	+	0	ID=cds822;Parent=gene915;Dbxref=Genbank:YP_402602.1,GeneID:3798490;Name=YP_402602.1;Note=catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand;gbkey=CDS;gene=helD;product=DNA helicase IV;protein_id=YP_402602.1;transl_table=11
NC_007606.1	RefSeq	gene	889205	889663	.	-	.	ID=gene916;Dbxref=GeneID:3798491;Name=mgsA;Note=SDY0938;gbkey=Gene;gene=mgsA;gene_biotype=protein_coding;locus_tag=SDY_0938
NC_007606.1	RefSeq	CDS	889205	889663	.	-	0	ID=cds823;Parent=gene916;Dbxref=Genbank:YP_402603.2,GeneID:3798491;Name=YP_402603.2;Note=catalyzes the formation of methylglyoxal from glycerone phosphate;gbkey=CDS;gene=mgsA;product=methylglyoxal synthase;protein_id=YP_402603.2;transl_table=11
NC_007606.1	RefSeq	gene	889759	890421	.	-	.	ID=gene917;Dbxref=GeneID:3798492;Name=SDY_0939;Note=SDY0939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0939
NC_007606.1	RefSeq	CDS	889759	890421	.	-	0	ID=cds824;Parent=gene917;Dbxref=Genbank:YP_402604.1,GeneID:3798492;Name=YP_402604.1;Note=Code: S%3B COG: COG3110;gbkey=CDS;product=hypothetical protein;protein_id=YP_402604.1;transl_table=11
NC_007606.1	RefSeq	gene	890513	891007	.	+	.	ID=gene918;Dbxref=GeneID:3798493;Name=SDY_0940;Note=SDY0940;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0940
NC_007606.1	RefSeq	CDS	890513	891007	.	+	0	ID=cds825;Parent=gene918;Dbxref=Genbank:YP_402605.1,GeneID:3798493;Name=YP_402605.1;Note=Code: R%3B COG: COG1832;gbkey=CDS;product=hypothetical protein;protein_id=YP_402605.1;transl_table=11
NC_007606.1	RefSeq	gene	891052	891420	.	-	.	ID=gene919;Dbxref=GeneID:3798494;Name=yccV;Note=SDY0941;gbkey=Gene;gene=yccV;gene_biotype=protein_coding;locus_tag=SDY_0941
NC_007606.1	RefSeq	CDS	891052	891420	.	-	0	ID=cds826;Parent=gene919;Dbxref=Genbank:YP_402606.1,GeneID:3798494;Name=YP_402606.1;Note=Code: S%3B COG: COG3785;gbkey=CDS;gene=yccV;product=hypothetical protein;protein_id=YP_402606.1;transl_table=11
NC_007606.1	RefSeq	gene	891427	892623	.	-	.	ID=gene920;Dbxref=GeneID:3798495;Name=yccW;Note=SDY0942;gbkey=Gene;gene=yccW;gene_biotype=protein_coding;locus_tag=SDY_0942
NC_007606.1	RefSeq	CDS	891427	892623	.	-	0	ID=cds827;Parent=gene920;Dbxref=Genbank:YP_402607.1,GeneID:3798495;Name=YP_402607.1;Note=Code: R%3B COG: COG1092;gbkey=CDS;gene=yccW;product=hypothetical protein;protein_id=YP_402607.1;transl_table=11
NC_007606.1	RefSeq	gene	892718	892996	.	+	.	ID=gene921;Dbxref=GeneID:3798496;Name=SDY_0943;Note=SDY0943;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0943
NC_007606.1	RefSeq	CDS	892718	892996	.	+	0	ID=cds828;Parent=gene921;Dbxref=Genbank:YP_402608.1,GeneID:3798496;Name=YP_402608.1;Note=Code: C%3B COG: COG1254;gbkey=CDS;product=hypothetical protein;protein_id=YP_402608.1;transl_table=11
NC_007606.1	RefSeq	gene	892993	893322	.	-	.	ID=gene922;Dbxref=GeneID:3798497;Name=yccK;Note=SDY0944;gbkey=Gene;gene=yccK;gene_biotype=protein_coding;locus_tag=SDY_0944
NC_007606.1	RefSeq	CDS	892993	893322	.	-	0	ID=cds829;Parent=gene922;Dbxref=Genbank:YP_402609.2,GeneID:3798497;Name=YP_402609.2;Note=transfers sulfur from TusBCD complex to MnmA%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;gene=yccK;product=sulfur transfer protein TusE;protein_id=YP_402609.2;transl_table=11
NC_007606.1	RefSeq	gene	893413	894072	.	-	.	ID=gene923;Dbxref=GeneID:3798498;Name=yccA;Note=SDY0945;gbkey=Gene;gene=yccA;gene_biotype=protein_coding;locus_tag=SDY_0945
NC_007606.1	RefSeq	CDS	893413	894072	.	-	0	ID=cds830;Parent=gene923;Dbxref=Genbank:YP_402610.1,GeneID:3798498;Name=YP_402610.1;Note=Code: R%3B COG: COG0670;gbkey=CDS;gene=yccA;product=hypothetical protein;protein_id=YP_402610.1;transl_table=11
NC_007606.1	RefSeq	gene	894284	894371	.	-	.	ID=gene924;Dbxref=GeneID:3798499;Name=SDY_0946;Note=SDY0946;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_0946
NC_007606.1	RefSeq	tRNA	894284	894371	.	-	.	ID=rna23;Parent=gene924;Dbxref=GeneID:3798499;codons=6;gbkey=tRNA;product=tRNA-Ser
NC_007606.1	RefSeq	exon	894284	894371	.	-	.	ID=id143;Parent=rna23;Dbxref=GeneID:3798499;codons=6;gbkey=tRNA;product=tRNA-Ser
NC_007606.1	RefSeq	gene	894797	895915	.	+	.	ID=gene925;Dbxref=GeneID:3798500;Name=hyaA;Note=SDY0947;gbkey=Gene;gene=hyaA;gene_biotype=protein_coding;locus_tag=SDY_0947
NC_007606.1	RefSeq	CDS	894797	895915	.	+	0	ID=cds831;Parent=gene925;Dbxref=Genbank:YP_402611.1,GeneID:3798500;Name=YP_402611.1;Note=Code: C%3B COG: COG1740;gbkey=CDS;gene=hyaA;product=hydrogenase-1 small subunit;protein_id=YP_402611.1;transl_table=11
NC_007606.1	RefSeq	gene	895912	897691	.	+	.	ID=gene926;Dbxref=GeneID:3798501;Name=hyaB;Note=SDY0948;gbkey=Gene;gene=hyaB;gene_biotype=pseudogene;locus_tag=SDY_0948;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	897710	898417	.	+	.	ID=gene927;Dbxref=GeneID:3798502;Name=hyaC;Note=SDY0949;gbkey=Gene;gene=hyaC;gene_biotype=protein_coding;locus_tag=SDY_0949
NC_007606.1	RefSeq	CDS	897710	898417	.	+	0	ID=cds832;Parent=gene927;Dbxref=Genbank:YP_402613.1,GeneID:3798502;Name=YP_402613.1;Note=Code: C%3B COG: COG1969;gbkey=CDS;gene=hyaC;product=hydrogenase 1 b-type cytochrome subunit;protein_id=YP_402613.1;transl_table=11
NC_007606.1	RefSeq	gene	898414	899001	.	+	.	ID=gene928;Dbxref=GeneID:3798503;Name=hyaD;Note=SDY0950;gbkey=Gene;gene=hyaD;gene_biotype=protein_coding;locus_tag=SDY_0950
NC_007606.1	RefSeq	CDS	898414	899001	.	+	0	ID=cds833;Parent=gene928;Dbxref=Genbank:YP_402614.1,GeneID:3798503;Name=YP_402614.1;Note=HyaD%3B endopeptidase involved in the cleavage of the C-terminus end of HyaB (the large subunit of hydrogenase 1);gbkey=CDS;gene=hyaD;product=hydrogenase 1 maturation protease;protein_id=YP_402614.1;transl_table=11
NC_007606.1	RefSeq	gene	898998	899396	.	+	.	ID=gene929;Dbxref=GeneID:3798504;Name=hyaE;Note=SDY0951;gbkey=Gene;gene=hyaE;gene_biotype=protein_coding;locus_tag=SDY_0951
NC_007606.1	RefSeq	CDS	898998	899396	.	+	0	ID=cds834;Parent=gene929;Dbxref=Genbank:YP_402615.1,GeneID:3798504;Name=YP_402615.1;Note=involved in processing hydrogenases HyaA and HyaB;gbkey=CDS;gene=hyaE;product=hydrogenase-1 operon protein HyaE;protein_id=YP_402615.1;transl_table=11
NC_007606.1	RefSeq	gene	899393	900223	.	+	.	ID=gene930;Dbxref=GeneID:3798728;Name=hyaF;Note=SDY0952%3B contains in-frame stop codon;gbkey=Gene;gene=hyaF;gene_biotype=pseudogene;locus_tag=SDY_0952;pseudo=true
NC_007606.1	RefSeq	region	899393	900223	.	+	.	ID=id144;Dbxref=GeneID:3798728;Note=original product: nickel incorporation into hydrogenase-1 proteins;gbkey=misc_feature;gene=hyaF
NC_007606.1	RefSeq	gene	900384	901928	.	+	.	ID=gene931;Dbxref=GeneID:3798729;Name=appC;Note=SDY0953;gbkey=Gene;gene=appC;gene_biotype=protein_coding;locus_tag=SDY_0953
NC_007606.1	RefSeq	CDS	900384	901928	.	+	0	ID=cds835;Parent=gene931;Dbxref=Genbank:YP_402616.1,GeneID:3798729;Name=YP_402616.1;Note=Code: C%3B COG: COG1271;gbkey=CDS;gene=appC;product=cytochrome bd-II oxidase subunit I;protein_id=YP_402616.1;transl_table=11
NC_007606.1	RefSeq	gene	901940	903076	.	+	.	ID=gene932;Dbxref=GeneID:3798730;Name=appB;Note=SDY0954;gbkey=Gene;gene=appB;gene_biotype=protein_coding;locus_tag=SDY_0954
NC_007606.1	RefSeq	CDS	901940	903076	.	+	0	ID=cds836;Parent=gene932;Dbxref=Genbank:YP_402617.1,GeneID:3798730;Name=YP_402617.1;Note=Code: C%3B COG: COG1294;gbkey=CDS;gene=appB;product=cytochrome bd-II oxidase subunit II;protein_id=YP_402617.1;transl_table=11
NC_007606.1	RefSeq	gene	903089	903181	.	+	.	ID=gene933;Dbxref=GeneID:3798731;Name=yccB;Note=SDY0955;gbkey=Gene;gene=yccB;gene_biotype=protein_coding;locus_tag=SDY_0955
NC_007606.1	RefSeq	CDS	903089	903181	.	+	0	ID=cds837;Parent=gene933;Dbxref=Genbank:YP_402618.1,GeneID:3798731;Name=YP_402618.1;Note=Code: S%3B COG: COG4890;gbkey=CDS;gene=yccB;product=hypothetical protein;protein_id=YP_402618.1;transl_table=11
NC_007606.1	RefSeq	gene	903261	904565	.	+	.	ID=gene934;Dbxref=GeneID:3798732;Name=appA;Note=SDY0956;gbkey=Gene;gene=appA;gene_biotype=protein_coding;locus_tag=SDY_0956
NC_007606.1	RefSeq	CDS	903261	904565	.	+	0	ID=cds838;Parent=gene934;Dbxref=Genbank:YP_402619.1,GeneID:3798732;Name=YP_402619.1;gbkey=CDS;gene=appA;product=phosphoanhydride phosphorylase;protein_id=YP_402619.1;transl_table=11
NC_007606.1	RefSeq	gene	904685	906865	.	-	.	ID=gene935;Dbxref=GeneID:3798733;Name=yccC;Note=SDY0957;gbkey=Gene;gene=yccC;gene_biotype=protein_coding;locus_tag=SDY_0957
NC_007606.1	RefSeq	CDS	904685	906865	.	-	0	ID=cds839;Parent=gene935;Dbxref=Genbank:YP_402620.1,GeneID:3798733;Name=YP_402620.1;Note=Code: M%3B COG: COG3206;gbkey=CDS;gene=yccC;product=cryptic autophosphorylating protein tyrosine kinase Etk;protein_id=YP_402620.1;transl_table=11
NC_007606.1	RefSeq	gene	906885	907331	.	-	.	ID=gene936;Dbxref=GeneID:3798734;Name=etp;Note=SDY0958;gbkey=Gene;gene=etp;gene_biotype=protein_coding;locus_tag=SDY_0958
NC_007606.1	RefSeq	CDS	906885	907331	.	-	0	ID=cds840;Parent=gene936;Dbxref=Genbank:YP_402621.2,GeneID:3798734;Name=YP_402621.2;Note=''Etk and Etp are a tyrosine kinase-tyrosine phosphatase pair%2C etp dephosphorylates etk'';gbkey=CDS;gene=etp;product=phosphotyrosine-protein phosphatase;protein_id=YP_402621.2;transl_table=11
NC_007606.1	RefSeq	gene	907319	908458	.	-	.	ID=gene937;Dbxref=GeneID:3798735;Name=yccZ;Note=SDY0959;gbkey=Gene;gene=yccZ;gene_biotype=protein_coding;locus_tag=SDY_0959
NC_007606.1	RefSeq	CDS	907319	908458	.	-	0	ID=cds841;Parent=gene937;Dbxref=Genbank:YP_402622.1,GeneID:3798735;Name=YP_402622.1;Note=Code: M%3B COG: COG1596;gbkey=CDS;gene=yccZ;product=function in exopolysaccharide production;protein_id=YP_402622.1;transl_table=11
NC_007606.1	RefSeq	gene	908504	910600	.	-	.	ID=gene938;Dbxref=GeneID:3798736;Name=ymcA;Note=SDY0960;gbkey=Gene;gene=ymcA;gene_biotype=protein_coding;locus_tag=SDY_0960
NC_007606.1	RefSeq	CDS	908504	910600	.	-	0	ID=cds842;Parent=gene938;Dbxref=Genbank:YP_402623.1,GeneID:3798736;Name=YP_402623.1;gbkey=CDS;gene=ymcA;product=hypothetical protein;protein_id=YP_402623.1;transl_table=11
NC_007606.1	RefSeq	gene	910600	911346	.	-	.	ID=gene939;Dbxref=GeneID:3798737;Name=ymcB;Note=SDY0961;gbkey=Gene;gene=ymcB;gene_biotype=protein_coding;locus_tag=SDY_0961
NC_007606.1	RefSeq	CDS	910600	911346	.	-	0	ID=cds843;Parent=gene939;Dbxref=Genbank:YP_402624.1,GeneID:3798737;Name=YP_402624.1;gbkey=CDS;gene=ymcB;product=hypothetical protein;protein_id=YP_402624.1;transl_table=11
NC_007606.1	RefSeq	gene	911343	911987	.	-	.	ID=gene940;Dbxref=GeneID:3798738;Name=ymcC;Note=SDY0962;gbkey=Gene;gene=ymcC;gene_biotype=protein_coding;locus_tag=SDY_0962
NC_007606.1	RefSeq	CDS	911343	911987	.	-	0	ID=cds844;Parent=gene940;Dbxref=Genbank:YP_402625.1,GeneID:3798738;Name=YP_402625.1;gbkey=CDS;gene=ymcC;product=regulator;protein_id=YP_402625.1;transl_table=11
NC_007606.1	RefSeq	gene	912094	912417	.	-	.	ID=gene941;Dbxref=GeneID:3798739;Name=ymcD;Note=SDY0963;gbkey=Gene;gene=ymcD;gene_biotype=protein_coding;locus_tag=SDY_0963
NC_007606.1	RefSeq	CDS	912094	912417	.	-	0	ID=cds845;Parent=gene941;Dbxref=Genbank:YP_402626.1,GeneID:3798739;Name=YP_402626.1;gbkey=CDS;gene=ymcD;product=hypothetical protein;protein_id=YP_402626.1;transl_table=11
NC_007606.1	RefSeq	gene	912841	913053	.	-	.	ID=gene942;Dbxref=GeneID:3798740;Name=cspH;Note=SDY0964;gbkey=Gene;gene=cspH;gene_biotype=protein_coding;locus_tag=SDY_0964
NC_007606.1	RefSeq	CDS	912841	913053	.	-	0	ID=cds846;Parent=gene942;Dbxref=Genbank:YP_402627.1,GeneID:3798740;Name=YP_402627.1;Note=Code: K%3B COG: COG1278;gbkey=CDS;gene=cspH;product=cold shock-like protein;protein_id=YP_402627.1;transl_table=11
NC_007606.1	RefSeq	region	913316	914081	.	-	.	ID=id145;gbkey=mobile_element
NC_007606.1	RefSeq	gene	913330	913725	.	-	.	ID=gene943;Dbxref=GeneID:3798741;Name=SDY_0965;Note=SDY0965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0965
NC_007606.1	RefSeq	CDS	913330	913725	.	-	0	ID=cds847;Parent=gene943;Dbxref=Genbank:YP_402628.1,GeneID:3798741;Name=YP_402628.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402628.1;transl_table=11
NC_007606.1	RefSeq	gene	913752	914024	.	-	.	ID=gene944;Dbxref=GeneID:18262984;Name=SDY_0965a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0965a
NC_007606.1	RefSeq	CDS	913752	914024	.	-	0	ID=cds848;Parent=gene944;Dbxref=Genbank:YP_009000670.1,GeneID:18262984;Name=YP_009000670.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000670.1;transl_table=11
NC_007606.1	RefSeq	gene	914060	914620	.	-	.	ID=gene945;Dbxref=GeneID:3798742;Name=yccM;Note=SDY0966;gbkey=Gene;gene=yccM;gene_biotype=protein_coding;locus_tag=SDY_0966
NC_007606.1	RefSeq	CDS	914060	914620	.	-	0	ID=cds849;Parent=gene945;Dbxref=Genbank:YP_402629.1,GeneID:3798742;Name=YP_402629.1;Note=Code: C%3B COG: COG0348;gbkey=CDS;gene=yccM;product=hypothetical protein;protein_id=YP_402629.1;transl_table=11
NC_007606.1	RefSeq	gene	914692	917284	.	-	.	ID=gene946;Dbxref=GeneID:3798743;Name=torS;Note=SDY0967%3B frameshift%3B original product: sensor protein torS (regulator TorR);gbkey=Gene;gene=torS;gene_biotype=pseudogene;locus_tag=SDY_0967;pseudo=true
NC_007606.1	RefSeq	gene	917512	918540	.	+	.	ID=gene947;Dbxref=GeneID:3798744;Name=torT;Note=SDY0968;gbkey=Gene;gene=torT;gene_biotype=protein_coding;locus_tag=SDY_0968
NC_007606.1	RefSeq	CDS	917512	918540	.	+	0	ID=cds850;Parent=gene947;Dbxref=Genbank:YP_402630.1,GeneID:3798744;Name=YP_402630.1;Note=periplasmic sensory protein associated with the TorRS two-component regulatory system;gbkey=CDS;gene=torT;product=TMAO reductase system periplasmic protein TorT;protein_id=YP_402630.1;transl_table=11
NC_007606.1	RefSeq	gene	918513	919205	.	-	.	ID=gene948;Dbxref=GeneID:3798745;Name=torR;Note=SDY0969;gbkey=Gene;gene=torR;gene_biotype=protein_coding;locus_tag=SDY_0969
NC_007606.1	RefSeq	CDS	918513	919205	.	-	0	ID=cds851;Parent=gene948;Dbxref=Genbank:YP_402631.1,GeneID:3798745;Name=YP_402631.1;Note=response regulator in two-component regulatory system with TorS%3B involved in regulation of trimethylamine N-oxide reductase genes;gbkey=CDS;gene=torR;product=DNA-binding transcriptional regulator TorR;protein_id=YP_402631.1;transl_table=11
NC_007606.1	RefSeq	gene	919325	920452	.	+	.	ID=gene949;Dbxref=GeneID:3797066;Name=torC;Note=''SDY0970%3B contains in-frame stop codon%3B original product: trimethylamine N-oxide reductase%2C cytochrome c-type subunit'';gbkey=Gene;gene=torC;gene_biotype=pseudogene;locus_tag=SDY_0970;pseudo=true
NC_007606.1	RefSeq	gene	920452	922921	.	+	.	ID=gene950;Dbxref=GeneID:3797067;Name=torA;Note=''SDY0971%3B frameshift and contains in-frame stop codon%3B original product: trimethylamine N-oxide reductase%2C cytochrome c-type subunit'';gbkey=Gene;gene=torA;gene_biotype=pseudogene;locus_tag=SDY_0971;pseudo=true
NC_007606.1	RefSeq	gene	922989	923588	.	+	.	ID=gene951;Dbxref=GeneID:3797068;Name=torD;Note=SDY0972;gbkey=Gene;gene=torD;gene_biotype=protein_coding;locus_tag=SDY_0972
NC_007606.1	RefSeq	CDS	922989	923588	.	+	0	ID=cds852;Parent=gene951;Dbxref=Genbank:YP_402632.1,GeneID:3797068;Name=YP_402632.1;Note=''TorD%3B involved in the biogenesis of torA%3B acts on torA before the insertion of the molybdenum cofactor and%2C as a result%2C probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor'';gbkey=CDS;gene=torD;product=chaperone protein TorD;protein_id=YP_402632.1;transl_table=11
NC_007606.1	RefSeq	gene	923740	924045	.	-	.	ID=gene952;Dbxref=GeneID:3797069;Name=yccD;Note=SDY0973;gbkey=Gene;gene=yccD;gene_biotype=protein_coding;locus_tag=SDY_0973
NC_007606.1	RefSeq	CDS	923740	924045	.	-	0	ID=cds853;Parent=gene952;Dbxref=Genbank:YP_402633.1,GeneID:3797069;Name=YP_402633.1;Note=with CpbA modulates the activity of the dnaK chaperone system%3B interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA;gbkey=CDS;gene=yccD;product=chaperone-modulator protein CbpM;protein_id=YP_402633.1;transl_table=11
NC_007606.1	RefSeq	gene	924045	924965	.	-	.	ID=gene953;Dbxref=GeneID:3797070;Name=cbpA;Note=SDY0974;gbkey=Gene;gene=cbpA;gene_biotype=protein_coding;locus_tag=SDY_0974
NC_007606.1	RefSeq	CDS	924045	924965	.	-	0	ID=cds854;Parent=gene953;Dbxref=Genbank:YP_402634.1,GeneID:3797070;Name=YP_402634.1;Note=''functional analog of DnaJ%3B co-chaperone with DnaK%2C molecular chaperone in an adaptive response to environmental stresses other than heat shock'';gbkey=CDS;gene=cbpA;product=curved DNA-binding protein CbpA;protein_id=YP_402634.1;transl_table=11
NC_007606.1	RefSeq	region	925175	925794	.	+	.	ID=id146;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	925232	925504	.	+	.	ID=gene954;Dbxref=GeneID:18262985;Name=SDY_0974a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0974a
NC_007606.1	RefSeq	CDS	925232	925504	.	+	0	ID=cds855;Parent=gene954;Dbxref=Genbank:YP_009000671.1,GeneID:18262985;Name=YP_009000671.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000671.1;transl_table=11
NC_007606.1	RefSeq	gene	925531	925815	.	+	.	ID=gene955;Dbxref=GeneID:3797071;Name=SDY_0975;Note=SDY0975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0975
NC_007606.1	RefSeq	CDS	925531	925815	.	+	0	ID=cds856;Parent=gene955;Dbxref=Genbank:YP_009000672.1,GeneID:3797071;Name=YP_009000672.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_009000672.1;transl_table=11
NC_007606.1	RefSeq	region	925794	926561	.	-	.	ID=id147;gbkey=mobile_element
NC_007606.1	RefSeq	gene	925809	926186	.	-	.	ID=gene956;Dbxref=GeneID:3797072;Name=insB;Note=SDY0976;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0976
NC_007606.1	RefSeq	CDS	925809	926186	.	-	0	ID=cds857;Parent=gene956;Dbxref=Genbank:YP_402636.1,GeneID:3797072;Name=YP_402636.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402636.1;transl_table=11
NC_007606.1	RefSeq	gene	926548	927561	.	+	.	ID=gene957;Dbxref=GeneID:3797073;Name=SDY_0977;Note=SDY0977;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0977;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	927854	929095	.	+	.	ID=gene958;Dbxref=GeneID:3797074;Name=agp;Note=SDY0978;gbkey=Gene;gene=agp;gene_biotype=protein_coding;locus_tag=SDY_0978
NC_007606.1	RefSeq	CDS	927854	929095	.	+	0	ID=cds858;Parent=gene958;Dbxref=Genbank:YP_402638.1,GeneID:3797074;Name=YP_402638.1;gbkey=CDS;gene=agp;product=glucose-1-phosphatase/inositol phosphatase;protein_id=YP_402638.1;transl_table=11
NC_007606.1	RefSeq	gene	929133	929360	.	-	.	ID=gene959;Dbxref=GeneID:3797075;Name=yccJ;Note=SDY0979;gbkey=Gene;gene=yccJ;gene_biotype=protein_coding;locus_tag=SDY_0979
NC_007606.1	RefSeq	CDS	929133	929360	.	-	0	ID=cds859;Parent=gene959;Dbxref=Genbank:YP_402639.1,GeneID:3797075;Name=YP_402639.1;gbkey=CDS;gene=yccJ;product=hypothetical protein;protein_id=YP_402639.1;transl_table=11
NC_007606.1	RefSeq	gene	929381	929977	.	-	.	ID=gene960;Dbxref=GeneID:3797076;Name=wrbA;Note=SDY0980;gbkey=Gene;gene=wrbA;gene_biotype=protein_coding;locus_tag=SDY_0980
NC_007606.1	RefSeq	CDS	929381	929977	.	-	0	ID=cds860;Parent=gene960;Dbxref=Genbank:YP_402640.1,GeneID:3797076;Name=YP_402640.1;Note=stationary phase that binds TrpR repressor;gbkey=CDS;gene=wrbA;product=TrpR binding protein WrbA;protein_id=YP_402640.1;transl_table=11
NC_007606.1	RefSeq	gene	930350	930523	.	+	.	ID=gene961;Dbxref=GeneID:18262986;Name=SDY_0980a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0980a
NC_007606.1	RefSeq	CDS	930350	930523	.	+	0	ID=cds861;Parent=gene961;Dbxref=Genbank:YP_009000673.1,GeneID:18262986;Name=YP_009000673.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_009000673.1;transl_table=11
NC_007606.1	RefSeq	gene	930606	932000	.	-	.	ID=gene962;Dbxref=GeneID:3797077;Name=ycdG;Note=SDY0981;gbkey=Gene;gene=ycdG;gene_biotype=protein_coding;locus_tag=SDY_0981
NC_007606.1	RefSeq	CDS	930606	932000	.	-	0	ID=cds862;Parent=gene962;Dbxref=Genbank:YP_402641.1,GeneID:3797077;Name=YP_402641.1;Note=Code: F%3B COG: COG2233;gbkey=CDS;gene=ycdG;product=transport protein;protein_id=YP_402641.1;transl_table=11
NC_007606.1	RefSeq	gene	931955	932413	.	-	.	ID=gene963;Dbxref=GeneID:3797078;Name=SDY_0982;Note=SDY0982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0982
NC_007606.1	RefSeq	CDS	931955	932413	.	-	0	ID=cds863;Parent=gene963;Dbxref=Genbank:YP_402642.1,GeneID:3797078;Name=YP_402642.1;Note=Code: R%3B COG: COG1853;gbkey=CDS;product=hypothetical protein;protein_id=YP_402642.1;transl_table=11
NC_007606.1	RefSeq	gene	932460	933050	.	-	.	ID=gene964;Dbxref=GeneID:3797079;Name=SDY_0983;Note=SDY0983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0983
NC_007606.1	RefSeq	CDS	932460	933050	.	-	0	ID=cds864;Parent=gene964;Dbxref=Genbank:YP_402643.1,GeneID:3797079;Name=YP_402643.1;Note=Code: C%3B COG: COG0778;gbkey=CDS;product=hypothetical protein;protein_id=YP_402643.1;transl_table=11
NC_007606.1	RefSeq	gene	933060	933734	.	-	.	ID=gene965;Dbxref=GeneID:3797080;Name=SDY_0984;Note=SDY0984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0984
NC_007606.1	RefSeq	CDS	933060	933734	.	-	0	ID=cds865;Parent=gene965;Dbxref=Genbank:YP_402644.1,GeneID:3797080;Name=YP_402644.1;Note=Code: R%3B COG: COG0596;gbkey=CDS;product=acetyltransferase;protein_id=YP_402644.1;transl_table=11
NC_007606.1	RefSeq	gene	933742	934128	.	-	.	ID=gene966;Dbxref=GeneID:3797081;Name=SDY_0985;Note=SDY0985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0985
NC_007606.1	RefSeq	CDS	933742	934128	.	-	0	ID=cds866;Parent=gene966;Dbxref=Genbank:YP_402645.1,GeneID:3797081;Name=YP_402645.1;Note=Code: J%3B COG: COG0251;gbkey=CDS;product=hypothetical protein;protein_id=YP_402645.1;transl_table=11
NC_007606.1	RefSeq	gene	934140	934874	.	-	.	ID=gene967;Dbxref=GeneID:3797082;Name=SDY_0986;Note=SDY0986%3B contains in-frame stop codon%3B original product:  synthetase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0986;pseudo=true
NC_007606.1	RefSeq	gene	934832	935980	.	-	.	ID=gene968;Dbxref=GeneID:3797083;Name=SDY_0987;Note=SDY0987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0987
NC_007606.1	RefSeq	CDS	934832	935980	.	-	0	ID=cds867;Parent=gene968;Dbxref=Genbank:YP_402646.1,GeneID:3797083;Name=YP_402646.1;Note=Code: C%3B COG: COG2141;gbkey=CDS;product=hypothetical protein;protein_id=YP_402646.1;transl_table=11
NC_007606.1	RefSeq	gene	936212	936850	.	+	.	ID=gene969;Dbxref=GeneID:3797084;Name=ycdC;Note=SDY0988;gbkey=Gene;gene=ycdC;gene_biotype=protein_coding;locus_tag=SDY_0988
NC_007606.1	RefSeq	CDS	936212	936850	.	+	0	ID=cds868;Parent=gene969;Dbxref=Genbank:YP_402647.1,GeneID:3797084;Name=YP_402647.1;Note=Code: K%3B COG: COG1309;gbkey=CDS;gene=ycdC;product=tet operon regulator;protein_id=YP_402647.1;transl_table=11
NC_007606.1	RefSeq	gene	936890	940852	.	-	.	ID=gene970;Dbxref=GeneID:3797085;Name=putA;Note=''SDY0989%3B contains in-frame stop codon%3B original product: proline dehydrogenase%2C P5C dehydrogenase'';gbkey=Gene;gene=putA;gene_biotype=pseudogene;locus_tag=SDY_0989;pseudo=true
NC_007606.1	RefSeq	gene	941275	942783	.	+	.	ID=gene971;Dbxref=GeneID:3797125;Name=putP;Note=SDY0990;gbkey=Gene;gene=putP;gene_biotype=protein_coding;locus_tag=SDY_0990
NC_007606.1	RefSeq	CDS	941275	942783	.	+	0	ID=cds869;Parent=gene971;Dbxref=Genbank:YP_402648.1,GeneID:3797125;Name=YP_402648.1;Note=Code: ER%3B COG: COG0591;gbkey=CDS;gene=putP;product=major sodium/proline symporter;protein_id=YP_402648.1;transl_table=11
NC_007606.1	RefSeq	gene	942932	944261	.	-	.	ID=gene972;Dbxref=GeneID:3797126;Name=SDY_0991;Note=SDY0991;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_0991;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	944547	944684	.	-	.	ID=id148;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	944685	945452	.	+	.	ID=id149;gbkey=mobile_element
NC_007606.1	RefSeq	gene	944740	945015	.	+	.	ID=gene973;Dbxref=GeneID:3797128;Name=insA;Note=SDY0993;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_0993
NC_007606.1	RefSeq	CDS	944740	945015	.	+	0	ID=cds870;Parent=gene973;Dbxref=Genbank:YP_402651.1,GeneID:3797128;Name=YP_402651.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402651.1;transl_table=11
NC_007606.1	RefSeq	gene	945060	945437	.	+	.	ID=gene974;Dbxref=GeneID:3797129;Name=insB;Note=SDY0994;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_0994
NC_007606.1	RefSeq	CDS	945060	945437	.	+	0	ID=cds871;Parent=gene974;Dbxref=Genbank:YP_402652.1,GeneID:3797129;Name=YP_402652.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402652.1;transl_table=11
NC_007606.1	RefSeq	region	945455	946088	.	-	.	ID=id150;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	945759	946031	.	-	.	ID=gene975;Dbxref=GeneID:18262987;Name=SDY_0995a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0995a
NC_007606.1	RefSeq	CDS	945759	946031	.	-	0	ID=cds872;Parent=gene975;Dbxref=Genbank:YP_009000674.1,GeneID:18262987;Name=YP_009000674.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000674.1;transl_table=11
NC_007606.1	RefSeq	gene	946090	946485	.	+	.	ID=gene976;Dbxref=GeneID:3797131;Name=csgD;Note=SDY0996%3B truncated%3B original product:  2-component transcriptional regulator for 2nd curli operon;gbkey=Gene;gene=csgD;gene_biotype=pseudogene;locus_tag=SDY_0996;pseudo=true
NC_007606.1	RefSeq	gene	946490	946879	.	+	.	ID=gene977;Dbxref=GeneID:3797132;Name=csgE;Note=SDY0997;gbkey=Gene;gene=csgE;gene_biotype=protein_coding;locus_tag=SDY_0997
NC_007606.1	RefSeq	CDS	946490	946879	.	+	0	ID=cds873;Parent=gene977;Dbxref=Genbank:YP_402654.1,GeneID:3797132;Name=YP_402654.1;Note=chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation)%3B part of the curli secretion and assembly protein complex;gbkey=CDS;gene=csgE;product=curli assembly protein CsgE;protein_id=YP_402654.1;transl_table=11
NC_007606.1	RefSeq	gene	946904	947320	.	+	.	ID=gene978;Dbxref=GeneID:3797133;Name=csgF;Note=SDY0998;gbkey=Gene;gene=csgF;gene_biotype=protein_coding;locus_tag=SDY_0998
NC_007606.1	RefSeq	CDS	946904	947320	.	+	0	ID=cds874;Parent=gene978;Dbxref=Genbank:YP_402655.1,GeneID:3797133;Name=YP_402655.1;Note=nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation)%3B part of the curli secretion and assembly protein complex;gbkey=CDS;gene=csgF;product=curli assembly protein CsgF;protein_id=YP_402655.1;transl_table=11
NC_007606.1	RefSeq	gene	947347	948180	.	+	.	ID=gene979;Dbxref=GeneID:3797134;Name=csgG;Note=SDY0999;gbkey=Gene;gene=csgG;gene_biotype=protein_coding;locus_tag=SDY_0999
NC_007606.1	RefSeq	CDS	947347	948180	.	+	0	ID=cds875;Parent=gene979;Dbxref=Genbank:YP_402656.1,GeneID:3797134;Name=YP_402656.1;Note=Code: M%3B COG: COG1462;gbkey=CDS;gene=csgG;product=curli production assembly/transport protein;protein_id=YP_402656.1;transl_table=11
NC_007606.1	RefSeq	region	948215	948980	.	+	.	ID=id151;gbkey=mobile_element
NC_007606.1	RefSeq	gene	948272	948544	.	+	.	ID=gene980;Dbxref=GeneID:18262988;Name=SDY_0999a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_0999a
NC_007606.1	RefSeq	CDS	948272	948544	.	+	0	ID=cds876;Parent=gene980;Dbxref=Genbank:YP_009000675.1,GeneID:18262988;Name=YP_009000675.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000675.1;transl_table=11
NC_007606.1	RefSeq	gene	948571	948966	.	+	.	ID=gene981;Dbxref=GeneID:3797135;Name=SDY_1000;Note=SDY1000;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1000
NC_007606.1	RefSeq	CDS	948571	948966	.	+	0	ID=cds877;Parent=gene981;Dbxref=Genbank:YP_402657.1,GeneID:3797135;Name=YP_402657.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402657.1;transl_table=11
NC_007606.1	RefSeq	gene	949018	949557	.	-	.	ID=gene982;Dbxref=GeneID:3797136;Name=ycdZ;Note=SDY1001;gbkey=Gene;gene=ycdZ;gene_biotype=protein_coding;locus_tag=SDY_1001
NC_007606.1	RefSeq	CDS	949018	949557	.	-	0	ID=cds878;Parent=gene982;Dbxref=Genbank:YP_402658.1,GeneID:3797136;Name=YP_402658.1;gbkey=CDS;gene=ycdZ;product=hypothetical protein;protein_id=YP_402658.1;transl_table=11
NC_007606.1	RefSeq	gene	949611	950165	.	-	.	ID=gene983;Dbxref=GeneID:3797137;Name=ycdY;Note=SDY1002;gbkey=Gene;gene=ycdY;gene_biotype=protein_coding;locus_tag=SDY_1002
NC_007606.1	RefSeq	CDS	949611	950165	.	-	0	ID=cds879;Parent=gene983;Dbxref=Genbank:YP_402659.1,GeneID:3797137;Name=YP_402659.1;Note=Code: R%3B COG: COG3381;gbkey=CDS;gene=ycdY;product=oxidoreductase;protein_id=YP_402659.1;transl_table=11
NC_007606.1	RefSeq	gene	950189	950926	.	-	.	ID=gene984;Dbxref=GeneID:3797138;Name=ycdX;Note=SDY1003;gbkey=Gene;gene=ycdX;gene_biotype=protein_coding;locus_tag=SDY_1003
NC_007606.1	RefSeq	CDS	950189	950926	.	-	0	ID=cds880;Parent=gene984;Dbxref=Genbank:YP_402660.1,GeneID:3797138;Name=YP_402660.1;Note=Code: ER%3B COG: COG1387;gbkey=CDS;gene=ycdX;product=hydrolase;protein_id=YP_402660.1;transl_table=11
NC_007606.1	RefSeq	gene	950981	951958	.	-	.	ID=gene985;Dbxref=GeneID:3797139;Name=ycdW;Note=SDY1004;gbkey=Gene;gene=ycdW;gene_biotype=protein_coding;locus_tag=SDY_1004
NC_007606.1	RefSeq	CDS	950981	951958	.	-	0	ID=cds881;Parent=gene985;Dbxref=Genbank:YP_402661.1,GeneID:3797139;Name=YP_402661.1;Note=Code: HE%3B COG: COG0111;gbkey=CDS;gene=ycdW;product=dehydrogenase;protein_id=YP_402661.1;transl_table=11
NC_007606.1	RefSeq	gene	952153	952240	.	+	.	ID=gene986;Dbxref=GeneID:3797140;Name=SDY_1005;Note=SDY1005;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1005
NC_007606.1	RefSeq	tRNA	952153	952240	.	+	.	ID=rna24;Parent=gene986;Dbxref=GeneID:3797140;codons=5;gbkey=tRNA;product=tRNA-Ser
NC_007606.1	RefSeq	exon	952153	952240	.	+	.	ID=id152;Parent=rna24;Dbxref=GeneID:3797140;codons=5;gbkey=tRNA;product=tRNA-Ser
NC_007606.1	RefSeq	gene	952390	953232	.	-	.	ID=gene987;Dbxref=GeneID:3797141;Name=SDY_1006;Note=SDY1006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1006
NC_007606.1	RefSeq	CDS	952390	953232	.	-	0	ID=cds882;Parent=gene987;Dbxref=Genbank:YP_402662.1,GeneID:3797141;Name=YP_402662.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402662.1;transl_table=11
NC_007606.1	RefSeq	gene	953329	953526	.	-	.	ID=gene988;Dbxref=GeneID:3797142;Name=SDY_1007;Note=SDY1007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1007
NC_007606.1	RefSeq	CDS	953329	953526	.	-	0	ID=cds883;Parent=gene988;Dbxref=Genbank:YP_402663.1,GeneID:3797142;Name=YP_402663.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402663.1;transl_table=11
NC_007606.1	RefSeq	gene	953538	954029	.	-	.	ID=gene989;Dbxref=GeneID:3797163;Name=SDY_1008;Note=SDY1008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1008
NC_007606.1	RefSeq	CDS	953538	954029	.	-	0	ID=cds884;Parent=gene989;Dbxref=Genbank:YP_402664.1,GeneID:3797163;Name=YP_402664.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402664.1;transl_table=11
NC_007606.1	RefSeq	gene	954026	954400	.	-	.	ID=gene990;Dbxref=GeneID:3797164;Name=yeeV;Note=SDY1009;gbkey=Gene;gene=yeeV;gene_biotype=protein_coding;locus_tag=SDY_1009
NC_007606.1	RefSeq	CDS	954026	954400	.	-	0	ID=cds885;Parent=gene990;Dbxref=Genbank:YP_402665.1,GeneID:3797164;Name=YP_402665.1;gbkey=CDS;gene=yeeV;product=hypothetical protein;protein_id=YP_402665.1;transl_table=11
NC_007606.1	RefSeq	gene	954447	954824	.	-	.	ID=gene991;Dbxref=GeneID:3797165;Name=yeeU;Note=SDY1010;gbkey=Gene;gene=yeeU;gene_biotype=protein_coding;locus_tag=SDY_1010
NC_007606.1	RefSeq	CDS	954447	954824	.	-	0	ID=cds886;Parent=gene991;Dbxref=Genbank:YP_402666.1,GeneID:3797165;Name=YP_402666.1;gbkey=CDS;gene=yeeU;product=structural protein;protein_id=YP_402666.1;transl_table=11
NC_007606.1	RefSeq	gene	954874	955518	.	-	.	ID=gene992;Dbxref=GeneID:3797166;Name=SDY_1011;Note=SDY1011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1011
NC_007606.1	RefSeq	CDS	954874	955518	.	-	0	ID=cds887;Parent=gene992;Dbxref=Genbank:YP_402667.1,GeneID:3797166;Name=YP_402667.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402667.1;transl_table=11
NC_007606.1	RefSeq	gene	955537	955758	.	-	.	ID=gene993;Dbxref=GeneID:3797167;Name=yeeT;Note=SDY1012;gbkey=Gene;gene=yeeT;gene_biotype=protein_coding;locus_tag=SDY_1012
NC_007606.1	RefSeq	CDS	955537	955758	.	-	0	ID=cds888;Parent=gene993;Dbxref=Genbank:YP_402668.1,GeneID:3797167;Name=YP_402668.1;gbkey=CDS;gene=yeeT;product=hypothetical protein;protein_id=YP_402668.1;transl_table=11
NC_007606.1	RefSeq	gene	955827	956279	.	-	.	ID=gene994;Dbxref=GeneID:3797168;Name=SDY_1013;Note=SDY1013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1013
NC_007606.1	RefSeq	CDS	955827	956279	.	-	0	ID=cds889;Parent=gene994;Dbxref=Genbank:YP_402669.1,GeneID:3797168;Name=YP_402669.1;Note=Code: L%3B COG: COG2003;gbkey=CDS;product=radC-like protein YeeS;protein_id=YP_402669.1;transl_table=11
NC_007606.1	RefSeq	gene	956295	956840	.	-	.	ID=gene995;Dbxref=GeneID:3797169;Name=SDY_1014;Note=SDY1014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1014
NC_007606.1	RefSeq	CDS	956295	956840	.	-	0	ID=cds890;Parent=gene995;Dbxref=Genbank:YP_402670.1,GeneID:3797169;Name=YP_402670.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402670.1;transl_table=11
NC_007606.1	RefSeq	gene	957048	957869	.	-	.	ID=gene996;Dbxref=GeneID:3797170;Name=SDY_1015;Note=SDY1015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1015
NC_007606.1	RefSeq	CDS	957048	957869	.	-	0	ID=cds891;Parent=gene996;Dbxref=Genbank:YP_402671.1,GeneID:3797170;Name=YP_402671.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402671.1;transl_table=11
NC_007606.1	RefSeq	gene	958263	958526	.	-	.	ID=gene997;Dbxref=GeneID:3797171;Name=SDY_1016;Note=SDY1016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1016
NC_007606.1	RefSeq	CDS	958263	958526	.	-	0	ID=cds892;Parent=gene997;Dbxref=Genbank:YP_402672.1,GeneID:3797171;Name=YP_402672.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402672.1;transl_table=11
NC_007606.1	RefSeq	gene	959177	959644	.	-	.	ID=gene998;Dbxref=GeneID:3797172;Name=SDY_1017;Note=SDY1017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1017
NC_007606.1	RefSeq	CDS	959177	959644	.	-	0	ID=cds893;Parent=gene998;Dbxref=Genbank:YP_402673.1,GeneID:3797172;Name=YP_402673.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402673.1;transl_table=11
NC_007606.1	RefSeq	region	960074	961246	.	+	.	ID=id153;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	960581	961423	.	+	.	ID=gene999;Dbxref=GeneID:3797173;Name=SDY_1018;Note=SDY1018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1018
NC_007606.1	RefSeq	CDS	960581	961423	.	+	0	ID=cds894;Parent=gene999;Dbxref=Genbank:YP_402674.1,GeneID:3797173;Name=YP_402674.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402674.1;transl_table=11
NC_007606.1	RefSeq	region	961246	962576	.	-	.	ID=id154;gbkey=mobile_element
NC_007606.1	RefSeq	gene	961257	962162	.	-	.	ID=gene1000;Dbxref=GeneID:3797174;Name=SDY_1019;Note=SDY1019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1019
NC_007606.1	RefSeq	CDS	961257	962162	.	-	0	ID=cds895;Parent=gene1000;Dbxref=Genbank:YP_402675.2,GeneID:3797174;Name=YP_402675.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_402675.2;transl_table=11
NC_007606.1	RefSeq	gene	962120	962485	.	-	.	ID=gene1001;Dbxref=GeneID:3797175;Name=SDY_1020;Note=SDY1020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1020
NC_007606.1	RefSeq	CDS	962120	962485	.	-	0	ID=cds896;Parent=gene1001;Dbxref=Genbank:YP_402676.1,GeneID:3797175;Name=YP_402676.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_402676.1;transl_table=11
NC_007606.1	RefSeq	region	962572	962673	.	+	.	ID=id155;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	963183	963948	.	-	.	ID=id156;gbkey=mobile_element
NC_007606.1	RefSeq	gene	963197	963592	.	-	.	ID=gene1002;Dbxref=GeneID:3797176;Name=SDY_1021;Note=SDY1021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1021
NC_007606.1	RefSeq	CDS	963197	963592	.	-	0	ID=cds897;Parent=gene1002;Dbxref=Genbank:YP_402677.1,GeneID:3797176;Name=YP_402677.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402677.1;transl_table=11
NC_007606.1	RefSeq	gene	963619	963891	.	-	.	ID=gene1003;Dbxref=GeneID:18262989;Name=SDY_1021a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1021a
NC_007606.1	RefSeq	CDS	963619	963891	.	-	0	ID=cds898;Parent=gene1003;Dbxref=Genbank:YP_009000676.1,GeneID:18262989;Name=YP_009000676.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000676.1;transl_table=11
NC_007606.1	RefSeq	gene	963985	966162	.	+	.	ID=gene1004;Dbxref=GeneID:3797177;Name=iroN;Note=SDY1022;gbkey=Gene;gene=iroN;gene_biotype=protein_coding;locus_tag=SDY_1022
NC_007606.1	RefSeq	CDS	963985	966162	.	+	0	ID=cds899;Parent=gene1004;Dbxref=Genbank:YP_402678.1,GeneID:3797177;Name=YP_402678.1;Note=Fep%3B Cbt%3B Cbr%3B FeuB%3B FepA%3B PfeA%3B IroN%3B BfeA%3B outer membrane receptor of ferric enterobactin and colicins B and D%3B interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space;gbkey=CDS;gene=iroN;product=outer membrane receptor FepA;protein_id=YP_402678.1;transl_table=11
NC_007606.1	RefSeq	gene	966207	967163	.	-	.	ID=gene1005;Dbxref=GeneID:3797178;Name=iroE;Note=SDY1023;gbkey=Gene;gene=iroE;gene_biotype=protein_coding;locus_tag=SDY_1023
NC_007606.1	RefSeq	CDS	966207	967163	.	-	0	ID=cds900;Parent=gene1005;Dbxref=Genbank:YP_402679.1,GeneID:3797178;Name=YP_402679.1;Note=Code: R%3B COG: COG2819;gbkey=CDS;gene=iroE;product=hypothetical protein;protein_id=YP_402679.1;transl_table=11
NC_007606.1	RefSeq	gene	967248	968477	.	-	.	ID=gene1006;Dbxref=GeneID:3797179;Name=iroD;Note=SDY1024;gbkey=Gene;gene=iroD;gene_biotype=protein_coding;locus_tag=SDY_1024
NC_007606.1	RefSeq	CDS	967248	968477	.	-	0	ID=cds901;Parent=gene1006;Dbxref=Genbank:YP_402680.1,GeneID:3797179;Name=YP_402680.1;Note=Code: P%3B COG: COG2382;gbkey=CDS;gene=iroD;product=ferric enterochelin esterase;protein_id=YP_402680.1;transl_table=11
NC_007606.1	RefSeq	gene	968581	972240	.	-	.	ID=gene1007;Dbxref=GeneID:3797180;Name=iroC;Note=SDY1025;gbkey=Gene;gene=iroC;gene_biotype=protein_coding;locus_tag=SDY_1025
NC_007606.1	RefSeq	CDS	968581	972240	.	-	0	ID=cds902;Parent=gene1007;Dbxref=Genbank:YP_402681.1,GeneID:3797180;Name=YP_402681.1;Note=Code: V%3B COG: COG1132;gbkey=CDS;gene=iroC;product=ABC transporter protein;protein_id=YP_402681.1;transl_table=11
NC_007606.1	RefSeq	gene	972380	973495	.	-	.	ID=gene1008;Dbxref=GeneID:3797181;Name=iroB;Note=SDY1026;gbkey=Gene;gene=iroB;gene_biotype=protein_coding;locus_tag=SDY_1026
NC_007606.1	RefSeq	CDS	972380	973495	.	-	0	ID=cds903;Parent=gene1008;Dbxref=Genbank:YP_402682.1,GeneID:3797181;Name=YP_402682.1;Note=Code: GC%3B COG: COG1819;gbkey=CDS;gene=iroB;product=glycosyl transferase;protein_id=YP_402682.1;transl_table=11
NC_007606.1	RefSeq	region	974247	975496	.	-	.	ID=id157;gbkey=mobile_element
NC_007606.1	RefSeq	gene	975122	975424	.	-	.	ID=gene1009;Dbxref=GeneID:3796806;Name=SDY_1030;Note=SDY1030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1030
NC_007606.1	RefSeq	CDS	975122	975424	.	-	0	ID=cds904;Parent=gene1009;Dbxref=Genbank:YP_402686.1,GeneID:3796806;Name=YP_402686.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_402686.1;transl_table=11
NC_007606.1	RefSeq	region	976043	976808	.	-	.	ID=id158;gbkey=mobile_element
NC_007606.1	RefSeq	gene	976057	976452	.	-	.	ID=gene1010;Dbxref=GeneID:3796807;Name=SDY_1031;Note=SDY1031;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1031
NC_007606.1	RefSeq	CDS	976057	976452	.	-	0	ID=cds905;Parent=gene1010;Dbxref=Genbank:YP_402687.1,GeneID:3796807;Name=YP_402687.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402687.1;transl_table=11
NC_007606.1	RefSeq	gene	976479	976751	.	-	.	ID=gene1011;Dbxref=GeneID:18262990;Name=SDY_1031a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1031a
NC_007606.1	RefSeq	CDS	976479	976751	.	-	0	ID=cds906;Parent=gene1011;Dbxref=Genbank:YP_009000677.1,GeneID:18262990;Name=YP_009000677.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000677.1;transl_table=11
NC_007606.1	RefSeq	gene	977103	977753	.	-	.	ID=gene1012;Dbxref=GeneID:3796809;Name=SDY_1033;Note=SDY1033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1033
NC_007606.1	RefSeq	CDS	977103	977753	.	-	0	ID=cds907;Parent=gene1012;Dbxref=Genbank:YP_402689.1,GeneID:3796809;Name=YP_402689.1;Note=Code: R%3B COG: COG3443;gbkey=CDS;product=hypothetical protein;protein_id=YP_402689.1;transl_table=11
NC_007606.1	RefSeq	gene	978010	978645	.	-	.	ID=gene1013;Dbxref=GeneID:3796810;Name=SDY_1034;Note=SDY1034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1034
NC_007606.1	RefSeq	CDS	978010	978645	.	-	0	ID=cds908;Parent=gene1013;Dbxref=Genbank:YP_402690.1,GeneID:3796810;Name=YP_402690.1;Note=in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY%3B sulfite oxidase activity not demonstrated%3B contains heme;gbkey=CDS;product=sulfite oxidase subunit YedZ;protein_id=YP_402690.1;transl_table=11
NC_007606.1	RefSeq	gene	978646	979650	.	-	.	ID=gene1014;Dbxref=GeneID:3796811;Name=SDY_1035;Note=SDY1035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1035
NC_007606.1	RefSeq	CDS	978646	979650	.	-	0	ID=cds909;Parent=gene1014;Dbxref=Genbank:YP_402691.1,GeneID:3796811;Name=YP_402691.1;Note=in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase%3B sulfite oxidase activity not demonstrated%3B requires inner membrane anchor protein YedZ;gbkey=CDS;product=sulfite oxidase subunit YedY;protein_id=YP_402691.1;transl_table=11
NC_007606.1	RefSeq	region	979862	980627	.	-	.	ID=id159;gbkey=mobile_element
NC_007606.1	RefSeq	gene	979876	980271	.	-	.	ID=gene1015;Dbxref=GeneID:3796812;Name=SDY_1036;Note=SDY1036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1036
NC_007606.1	RefSeq	CDS	979876	980271	.	-	0	ID=cds910;Parent=gene1015;Dbxref=Genbank:YP_402692.1,GeneID:3796812;Name=YP_402692.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402692.1;transl_table=11
NC_007606.1	RefSeq	gene	980298	980570	.	-	.	ID=gene1016;Dbxref=GeneID:18262991;Name=SDY_1038a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1038a
NC_007606.1	RefSeq	CDS	980298	980570	.	-	0	ID=cds911;Parent=gene1016;Dbxref=Genbank:YP_009000678.1,GeneID:18262991;Name=YP_009000678.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000678.1;transl_table=11
NC_007606.1	RefSeq	gene	980610	980936	.	-	.	ID=gene1017;Dbxref=GeneID:3796814;Name=SDY_1038;Note=SDY1038;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1038
NC_007606.1	RefSeq	CDS	980610	980936	.	-	0	ID=cds912;Parent=gene1017;Dbxref=Genbank:YP_402694.1,GeneID:3796814;Name=YP_402694.1;Note=Code: R%3B COG: COG2351;gbkey=CDS;product=hypothetical protein;protein_id=YP_402694.1;transl_table=11
NC_007606.1	RefSeq	gene	981069	981719	.	+	.	ID=gene1018;Dbxref=GeneID:3796815;Name=yedW;Note=SDY1039;gbkey=Gene;gene=yedW;gene_biotype=protein_coding;locus_tag=SDY_1039
NC_007606.1	RefSeq	CDS	981069	981719	.	+	0	ID=cds913;Parent=gene1018;Dbxref=Genbank:YP_402695.2,GeneID:3796815;Name=YP_402695.2;Note=induced by CusR in the presence of copper%3B YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW%3B yedVW is one of four copper regulons found in E. coli%3B part of the copper homeostasis mechanism%3B confers resistance to copper and several drugs when induced;gbkey=CDS;gene=yedW;product=transcriptional regulator YedW;protein_id=YP_402695.2;transl_table=11
NC_007606.1	RefSeq	region	981679	982445	.	-	.	ID=id160;gbkey=mobile_element;gene=yedW
NC_007606.1	RefSeq	gene	981694	982089	.	-	.	ID=gene1019;Dbxref=GeneID:3796816;Name=SDY_1040;Note=SDY1040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1040
NC_007606.1	RefSeq	CDS	981694	982089	.	-	0	ID=cds914;Parent=gene1019;Dbxref=Genbank:YP_402696.1,GeneID:3796816;Name=YP_402696.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402696.1;transl_table=11
NC_007606.1	RefSeq	gene	982116	982388	.	-	.	ID=gene1020;Dbxref=GeneID:18262992;Name=SDY_1042a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1042a
NC_007606.1	RefSeq	CDS	982116	982388	.	-	0	ID=cds915;Parent=gene1020;Dbxref=Genbank:YP_009000679.1,GeneID:18262992;Name=YP_009000679.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000679.1;transl_table=11
NC_007606.1	RefSeq	gene	982511	982894	.	+	.	ID=gene1021;Dbxref=GeneID:3796818;Name=SDY_1042;Note=SDY1042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1042
NC_007606.1	RefSeq	CDS	982511	982894	.	+	0	ID=cds916;Parent=gene1021;Dbxref=Genbank:YP_402698.1,GeneID:3796818;Name=YP_402698.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402698.1;transl_table=11
NC_007606.1	RefSeq	gene	982934	983618	.	+	.	ID=gene1022;Dbxref=GeneID:3796819;Name=SDY_1043;Note=SDY1043;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1043;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	983685	985103	.	+	.	ID=gene1023;Dbxref=GeneID:3796821;Name=dcm;Note=SDY1045;gbkey=Gene;gene=dcm;gene_biotype=protein_coding;locus_tag=SDY_1045
NC_007606.1	RefSeq	CDS	983685	985103	.	+	0	ID=cds917;Parent=gene1023;Dbxref=Genbank:YP_402701.1,GeneID:3796821;Name=YP_402701.1;Note=Code: L%3B COG: COG0270;gbkey=CDS;gene=dcm;product=DNA cytosine methylase;protein_id=YP_402701.1;transl_table=11
NC_007606.1	RefSeq	gene	985084	985554	.	+	.	ID=gene1024;Dbxref=GeneID:3796822;Name=vsr;Note=SDY1046;gbkey=Gene;gene=vsr;gene_biotype=protein_coding;locus_tag=SDY_1046
NC_007606.1	RefSeq	CDS	985084	985554	.	+	0	ID=cds918;Parent=gene1024;Dbxref=Genbank:YP_402702.1,GeneID:3796822;Name=YP_402702.1;Note=Code: L%3B COG: COG3727;gbkey=CDS;gene=vsr;product=DNA mismatch endonuclease;protein_id=YP_402702.1;transl_table=11
NC_007606.1	RefSeq	gene	985543	986463	.	-	.	ID=gene1025;Dbxref=GeneID:3796728;Name=yedA;Note=SDY1047;gbkey=Gene;gene=yedA;gene_biotype=protein_coding;locus_tag=SDY_1047
NC_007606.1	RefSeq	CDS	985543	986463	.	-	0	ID=cds919;Parent=gene1025;Dbxref=Genbank:YP_402703.1,GeneID:3796728;Name=YP_402703.1;Note=Code: GER%3B COG: COG0697;gbkey=CDS;gene=yedA;product=hypothetical protein;protein_id=YP_402703.1;transl_table=11
NC_007606.1	RefSeq	gene	986636	987553	.	+	.	ID=gene1026;Dbxref=GeneID:3796729;Name=yedI;Note=SDY1048;gbkey=Gene;gene=yedI;gene_biotype=protein_coding;locus_tag=SDY_1048
NC_007606.1	RefSeq	CDS	986636	987553	.	+	0	ID=cds920;Parent=gene1026;Dbxref=Genbank:YP_402704.1,GeneID:3796729;Name=YP_402704.1;Note=Code: S%3B COG: COG2354;gbkey=CDS;gene=yedI;product=hypothetical protein;protein_id=YP_402704.1;transl_table=11
NC_007606.1	RefSeq	gene	987632	987814	.	+	.	ID=gene1027;Dbxref=GeneID:3796730;Name=SDY_1049;Note=SDY1049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1049
NC_007606.1	RefSeq	CDS	987632	987814	.	+	0	ID=cds921;Parent=gene1027;Dbxref=Genbank:YP_402705.1,GeneID:3796730;Name=YP_402705.1;Note=Code: S%3B COG: COG5475;gbkey=CDS;product=hypothetical protein;protein_id=YP_402705.1;transl_table=11
NC_007606.1	RefSeq	gene	988003	989679	.	+	.	ID=gene1028;Dbxref=GeneID:3796731;Name=SDY_1050;Note=SDY1050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1050
NC_007606.1	RefSeq	CDS	988003	989679	.	+	0	ID=cds922;Parent=gene1028;Dbxref=Genbank:YP_402706.1,GeneID:3796731;Name=YP_402706.1;Note=Code: T%3B COG: COG2199;gbkey=CDS;product=hypothetical protein;protein_id=YP_402706.1;transl_table=11
NC_007606.1	RefSeq	gene	989676	990491	.	-	.	ID=gene1029;Dbxref=GeneID:3796732;Name=SDY_1051;Note=SDY1051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1051
NC_007606.1	RefSeq	CDS	989676	990491	.	-	0	ID=cds923;Parent=gene1029;Dbxref=Genbank:YP_402707.1,GeneID:3796732;Name=YP_402707.1;Note=catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate;gbkey=CDS;product=mannosyl-3-phosphoglycerate phosphatase;protein_id=YP_402707.1;transl_table=11
NC_007606.1	RefSeq	gene	990789	991031	.	-	.	ID=gene1030;Dbxref=GeneID:3796733;Name=SDY_1052;Note=SDY1052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1052
NC_007606.1	RefSeq	CDS	990789	991031	.	-	0	ID=cds924;Parent=gene1030;Dbxref=Genbank:YP_402708.1,GeneID:3796733;Name=YP_402708.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402708.1;transl_table=11
NC_007606.1	RefSeq	gene	991165	991353	.	+	.	ID=gene1031;Dbxref=GeneID:3796734;Name=dsrB;Note=SDY1053;gbkey=Gene;gene=dsrB;gene_biotype=protein_coding;locus_tag=SDY_1053
NC_007606.1	RefSeq	CDS	991165	991353	.	+	0	ID=cds925;Parent=gene1031;Dbxref=Genbank:YP_402709.1,GeneID:3796734;Name=YP_402709.1;gbkey=CDS;gene=dsrB;product=hypothetical protein;protein_id=YP_402709.1;transl_table=11
NC_007606.1	RefSeq	region	991636	992401	.	+	.	ID=id161;gbkey=mobile_element
NC_007606.1	RefSeq	gene	991693	991965	.	+	.	ID=gene1032;Dbxref=GeneID:18262993;Name=SDY_1053a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1053a
NC_007606.1	RefSeq	CDS	991693	991965	.	+	0	ID=cds926;Parent=gene1032;Dbxref=Genbank:YP_009000680.1,GeneID:18262993;Name=YP_009000680.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000680.1;transl_table=11
NC_007606.1	RefSeq	gene	991992	992387	.	+	.	ID=gene1033;Dbxref=GeneID:3796735;Name=SDY_1054;Note=SDY1054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1054
NC_007606.1	RefSeq	CDS	991992	992387	.	+	0	ID=cds927;Parent=gene1033;Dbxref=Genbank:YP_402710.1,GeneID:3796735;Name=YP_402710.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402710.1;transl_table=11
NC_007606.1	RefSeq	region	992447	993214	.	-	.	ID=id162;gbkey=mobile_element
NC_007606.1	RefSeq	gene	992462	992839	.	-	.	ID=gene1034;Dbxref=GeneID:3796736;Name=insB;Note=SDY1055;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1055
NC_007606.1	RefSeq	CDS	992462	992839	.	-	0	ID=cds928;Parent=gene1034;Dbxref=Genbank:YP_402711.1,GeneID:3796736;Name=YP_402711.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402711.1;transl_table=11
NC_007606.1	RefSeq	gene	992884	993159	.	-	.	ID=gene1035;Dbxref=GeneID:3796737;Name=insA;Note=SDY1056;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1056
NC_007606.1	RefSeq	CDS	992884	993159	.	-	0	ID=cds929;Parent=gene1035;Dbxref=Genbank:YP_402712.1,GeneID:3796737;Name=YP_402712.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402712.1;transl_table=11
NC_007606.1	RefSeq	region	993479	994244	.	-	.	ID=id163;gbkey=mobile_element
NC_007606.1	RefSeq	gene	993493	993888	.	-	.	ID=gene1036;Dbxref=GeneID:3796738;Name=SDY_1057;Note=SDY1057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1057
NC_007606.1	RefSeq	CDS	993493	993888	.	-	0	ID=cds930;Parent=gene1036;Dbxref=Genbank:YP_402713.1,GeneID:3796738;Name=YP_402713.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402713.1;transl_table=11
NC_007606.1	RefSeq	gene	993915	994187	.	-	.	ID=gene1037;Dbxref=GeneID:18262994;Name=SDY_1057a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1057a
NC_007606.1	RefSeq	CDS	993915	994187	.	-	0	ID=cds931;Parent=gene1037;Dbxref=Genbank:YP_009000681.1,GeneID:18262994;Name=YP_009000681.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000681.1;transl_table=11
NC_007606.1	RefSeq	gene	994264	995281	.	+	.	ID=gene1038;Dbxref=GeneID:3796740;Name=SDY_1059;Note=SDY1059;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1059;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	996113	996769	.	+	.	ID=gene1039;Dbxref=GeneID:3796741;Name=SDY_1060;Note=SDY1060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1060
NC_007606.1	RefSeq	CDS	996113	996769	.	+	0	ID=cds932;Parent=gene1039;Dbxref=Genbank:YP_402716.2,GeneID:3796741;Name=YP_402716.2;Note=Code: QR%3B COG: COG0500;gbkey=CDS;product=hypothetical protein;protein_id=YP_402716.2;transl_table=11
NC_007606.1	RefSeq	region	997076	997841	.	+	.	ID=id164;gbkey=mobile_element
NC_007606.1	RefSeq	gene	997133	997405	.	+	.	ID=gene1040;Dbxref=GeneID:18262995;Name=SDY_1061a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1061a
NC_007606.1	RefSeq	CDS	997133	997405	.	+	0	ID=cds933;Parent=gene1040;Dbxref=Genbank:YP_009000682.1,GeneID:18262995;Name=YP_009000682.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000682.1;transl_table=11
NC_007606.1	RefSeq	gene	997432	997827	.	+	.	ID=gene1041;Dbxref=GeneID:3796742;Name=SDY_1061;Note=SDY1061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1061
NC_007606.1	RefSeq	CDS	997432	997827	.	+	0	ID=cds934;Parent=gene1041;Dbxref=Genbank:YP_402717.1,GeneID:3796742;Name=YP_402717.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402717.1;transl_table=11
NC_007606.1	RefSeq	gene	997859	999369	.	+	.	ID=gene1042;Dbxref=GeneID:3796743;Name=SDY_1062;Note=SDY1062;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1062;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	999324	1000109	.	-	.	ID=gene1043;Dbxref=GeneID:3796744;Name=SDY_1063;Note=SDY1063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1063;pseudogene=unknown
NC_007606.1	RefSeq	CDS	999324	1000109	.	-	0	ID=cds935;Parent=gene1043;Dbxref=Genbank:YP_402719.1,GeneID:3796744;Name=YP_402719.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402719.1;transl_table=11
NC_007606.1	RefSeq	region	999351	1000616	.	-	.	ID=id165;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1000250	1000552	.	-	.	ID=gene1044;Dbxref=GeneID:3796745;Name=SDY_1064;Note=SDY1064;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1064
NC_007606.1	RefSeq	CDS	1000250	1000552	.	-	0	ID=cds936;Parent=gene1044;Dbxref=Genbank:YP_402720.1,GeneID:3796745;Name=YP_402720.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402720.1;transl_table=11
NC_007606.1	RefSeq	gene	1001080	1002129	.	-	.	ID=gene1045;Dbxref=GeneID:3796746;Name=SDY_1065;Note=SDY1065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1065
NC_007606.1	RefSeq	CDS	1001080	1002129	.	-	0	ID=cds937;Parent=gene1045;Dbxref=Genbank:YP_402721.1,GeneID:3796746;Name=YP_402721.1;gbkey=CDS;product=tail fiber protein;protein_id=YP_402721.1;transl_table=11
NC_007606.1	RefSeq	gene	1002153	1002641	.	-	.	ID=gene1046;Dbxref=GeneID:3796747;Name=SDY_1066;Note=SDY1066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1066
NC_007606.1	RefSeq	CDS	1002153	1002641	.	-	0	ID=cds938;Parent=gene1046;Dbxref=Genbank:YP_402722.1,GeneID:3796747;Name=YP_402722.1;gbkey=CDS;product=tail fiber assembly protein;protein_id=YP_402722.1;transl_table=11
NC_007606.1	RefSeq	gene	1002701	1002814	.	-	.	ID=gene1047;Dbxref=GeneID:3799923;Name=SDY_1067;Note=SDY1067;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1067
NC_007606.1	RefSeq	CDS	1002701	1002814	.	-	0	ID=cds939;Parent=gene1047;Dbxref=Genbank:YP_402723.1,GeneID:3799923;Name=YP_402723.1;gbkey=CDS;product=phage tail fiber protein;protein_id=YP_402723.1;transl_table=11
NC_007606.1	RefSeq	region	1002789	1004052	.	+	.	ID=id166;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1002853	1003155	.	+	.	ID=gene1048;Dbxref=GeneID:3799924;Name=SDY_1068;Note=SDY1068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1068
NC_007606.1	RefSeq	CDS	1002853	1003155	.	+	0	ID=cds940;Parent=gene1048;Dbxref=Genbank:YP_402724.1,GeneID:3799924;Name=YP_402724.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402724.1;transl_table=11
NC_007606.1	RefSeq	gene	1003296	1004009	.	+	.	ID=gene1049;Dbxref=GeneID:3799925;Name=SDY_1069;Note=SDY1069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1069
NC_007606.1	RefSeq	CDS	1003296	1004009	.	+	0	ID=cds941;Parent=gene1049;Dbxref=Genbank:YP_402725.1,GeneID:3799925;Name=YP_402725.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402725.1;transl_table=11
NC_007606.1	RefSeq	region	1004250	1005018	.	-	.	ID=id167;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1004265	1004660	.	-	.	ID=gene1050;Dbxref=GeneID:3799926;Name=SDY_1070;Note=SDY1070;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1070
NC_007606.1	RefSeq	CDS	1004265	1004660	.	-	0	ID=cds942;Parent=gene1050;Dbxref=Genbank:YP_402726.1,GeneID:3799926;Name=YP_402726.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402726.1;transl_table=11
NC_007606.1	RefSeq	gene	1004687	1004959	.	-	.	ID=gene1051;Dbxref=GeneID:18262996;Name=SDY_1069a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1069a
NC_007606.1	RefSeq	CDS	1004687	1004959	.	-	0	ID=cds943;Parent=gene1051;Dbxref=Genbank:YP_009000683.1,GeneID:18262996;Name=YP_009000683.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000683.1;transl_table=11
NC_007606.1	RefSeq	gene	1005132	1005221	.	-	.	ID=gene1052;Dbxref=GeneID:3799927;Name=SDY_1071;Note=SDY1071;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1071
NC_007606.1	RefSeq	tRNA	1005132	1005221	.	-	.	ID=rna25;Parent=gene1052;Dbxref=GeneID:3799927;codons=7;gbkey=tRNA;product=tRNA-Ser
NC_007606.1	RefSeq	exon	1005132	1005221	.	-	.	ID=id168;Parent=rna25;Dbxref=GeneID:3799927;codons=7;gbkey=tRNA;product=tRNA-Ser
NC_007606.1	RefSeq	gene	1005276	1006112	.	+	.	ID=gene1053;Dbxref=GeneID:3799928;Name=SDY_1072;Note=SDY1072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1072
NC_007606.1	RefSeq	CDS	1005276	1006112	.	+	0	ID=cds944;Parent=gene1053;Dbxref=Genbank:YP_402727.1,GeneID:3799928;Name=YP_402727.1;Note=Code: S%3B COG: COG3228;gbkey=CDS;product=hypothetical protein;protein_id=YP_402727.1;transl_table=11
NC_007606.1	RefSeq	gene	1006213	1006288	.	+	.	ID=gene1054;Dbxref=GeneID:3799929;Name=SDY_1073;Note=SDY1073;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1073
NC_007606.1	RefSeq	tRNA	1006213	1006288	.	+	.	ID=rna26;Parent=gene1054;Dbxref=GeneID:3799929;codons=41;gbkey=tRNA;product=tRNA-Asn
NC_007606.1	RefSeq	exon	1006213	1006288	.	+	.	ID=id169;Parent=rna26;Dbxref=GeneID:3799929;codons=41;gbkey=tRNA;product=tRNA-Asn
NC_007606.1	RefSeq	gene	1006574	1006978	.	+	.	ID=gene1055;Dbxref=GeneID:3799930;Name=SDY_1074;Note=SDY1074;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1074
NC_007606.1	RefSeq	CDS	1006574	1006978	.	+	0	ID=cds945;Parent=gene1055;Dbxref=Genbank:YP_402728.1,GeneID:3799930;Name=YP_402728.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402728.1;transl_table=11
NC_007606.1	RefSeq	gene	1007089	1007865	.	+	.	ID=gene1056;Dbxref=GeneID:3799931;Name=SDY_1075;Note=SDY1075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1075
NC_007606.1	RefSeq	CDS	1007089	1007865	.	+	0	ID=cds946;Parent=gene1056;Dbxref=Genbank:YP_402729.1,GeneID:3799931;Name=YP_402729.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402729.1;transl_table=11
NC_007606.1	RefSeq	gene	1007889	1008107	.	+	.	ID=gene1057;Dbxref=GeneID:3799932;Name=SDY_1076;Note=SDY1076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1076
NC_007606.1	RefSeq	CDS	1007889	1008107	.	+	0	ID=cds947;Parent=gene1057;Dbxref=Genbank:YP_402730.1,GeneID:3799932;Name=YP_402730.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402730.1;transl_table=11
NC_007606.1	RefSeq	gene	1008318	1008851	.	+	.	ID=gene1058;Dbxref=GeneID:3799933;Name=SDY_1077;Note=SDY1077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1077
NC_007606.1	RefSeq	CDS	1008318	1008851	.	+	0	ID=cds948;Parent=gene1058;Dbxref=Genbank:YP_402731.1,GeneID:3799933;Name=YP_402731.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402731.1;transl_table=11
NC_007606.1	RefSeq	region	1008811	1010141	.	-	.	ID=id170;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1008822	1009727	.	-	.	ID=gene1059;Dbxref=GeneID:3799934;Name=SDY_1078;Note=SDY1078;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1078
NC_007606.1	RefSeq	CDS	1008822	1009727	.	-	0	ID=cds949;Parent=gene1059;Dbxref=Genbank:YP_402732.2,GeneID:3799934;Name=YP_402732.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_402732.2;transl_table=11
NC_007606.1	RefSeq	gene	1009685	1010050	.	-	.	ID=gene1060;Dbxref=GeneID:3799935;Name=SDY_1079;Note=SDY1079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1079
NC_007606.1	RefSeq	CDS	1009685	1010050	.	-	0	ID=cds950;Parent=gene1060;Dbxref=Genbank:YP_402733.1,GeneID:3799935;Name=YP_402733.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_402733.1;transl_table=11
NC_007606.1	RefSeq	gene	1010274	1011211	.	-	.	ID=gene1061;Dbxref=GeneID:3799936;Name=SDY_1080;Note=SDY1080;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1080;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1011230	1011995	.	-	.	ID=id171;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1011244	1011639	.	-	.	ID=gene1062;Dbxref=GeneID:3799937;Name=SDY_1081;Note=SDY1081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1081
NC_007606.1	RefSeq	CDS	1011244	1011639	.	-	0	ID=cds951;Parent=gene1062;Dbxref=Genbank:YP_402735.1,GeneID:3799937;Name=YP_402735.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402735.1;transl_table=11
NC_007606.1	RefSeq	gene	1011666	1011938	.	-	.	ID=gene1063;Dbxref=GeneID:18262997;Name=SDY_1083a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1083a
NC_007606.1	RefSeq	CDS	1011666	1011938	.	-	0	ID=cds952;Parent=gene1063;Dbxref=Genbank:YP_009000684.1,GeneID:18262997;Name=YP_009000684.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000684.1;transl_table=11
NC_007606.1	RefSeq	region	1012068	1012834	.	-	.	ID=id172;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1012083	1012478	.	-	.	ID=gene1064;Dbxref=GeneID:3799939;Name=SDY_1083;Note=SDY1083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1083
NC_007606.1	RefSeq	CDS	1012083	1012478	.	-	0	ID=cds953;Parent=gene1064;Dbxref=Genbank:YP_402737.1,GeneID:3799939;Name=YP_402737.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402737.1;transl_table=11
NC_007606.1	RefSeq	gene	1012505	1012777	.	-	.	ID=gene1065;Dbxref=GeneID:18262998;Name=SDY_1084a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1084a
NC_007606.1	RefSeq	CDS	1012505	1012777	.	-	0	ID=cds954;Parent=gene1065;Dbxref=Genbank:YP_009000685.1,GeneID:18262998;Name=YP_009000685.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000685.1;transl_table=11
NC_007606.1	RefSeq	gene	1012902	1013573	.	-	.	ID=gene1066;Dbxref=GeneID:3797826;Name=yedK;Note=SDY1084;gbkey=Gene;gene=yedK;gene_biotype=protein_coding;locus_tag=SDY_1084
NC_007606.1	RefSeq	CDS	1012902	1013573	.	-	0	ID=cds955;Parent=gene1066;Dbxref=Genbank:YP_402738.1,GeneID:3797826;Name=YP_402738.1;Note=Code: S%3B COG: COG2135;gbkey=CDS;gene=yedK;product=hypothetical protein;protein_id=YP_402738.1;transl_table=11
NC_007606.1	RefSeq	gene	1013682	1013915	.	-	.	ID=gene1067;Dbxref=GeneID:3797827;Name=yedF;Note=SDY1085;gbkey=Gene;gene=yedF;gene_biotype=protein_coding;locus_tag=SDY_1085
NC_007606.1	RefSeq	CDS	1013682	1013915	.	-	0	ID=cds956;Parent=gene1067;Dbxref=Genbank:YP_402739.1,GeneID:3797827;Name=YP_402739.1;Note=Code: O%3B COG: COG0425;gbkey=CDS;gene=yedF;product=hypothetical protein;protein_id=YP_402739.1;transl_table=11
NC_007606.1	RefSeq	gene	1013912	1015117	.	-	.	ID=gene1068;Dbxref=GeneID:3797828;Name=yedE;Note=SDY1086;gbkey=Gene;gene=yedE;gene_biotype=protein_coding;locus_tag=SDY_1086
NC_007606.1	RefSeq	CDS	1013912	1015117	.	-	0	ID=cds957;Parent=gene1068;Dbxref=Genbank:YP_402740.1,GeneID:3797828;Name=YP_402740.1;Note=Code: R%3B COG: COG2391;gbkey=CDS;gene=yedE;product=inner membrane protein;protein_id=YP_402740.1;transl_table=11
NC_007606.1	RefSeq	gene	1015304	1015717	.	+	.	ID=gene1069;Dbxref=GeneID:3797829;Name=yedD;Note=SDY1087;gbkey=Gene;gene=yedD;gene_biotype=protein_coding;locus_tag=SDY_1087
NC_007606.1	RefSeq	CDS	1015304	1015717	.	+	0	ID=cds958;Parent=gene1069;Dbxref=Genbank:YP_402741.1,GeneID:3797829;Name=YP_402741.1;gbkey=CDS;gene=yedD;product=hypothetical protein;protein_id=YP_402741.1;transl_table=11
NC_007606.1	RefSeq	gene	1015751	1017238	.	-	.	ID=gene1070;Dbxref=GeneID:3797830;Name=amyA;Note=SDY1088;gbkey=Gene;gene=amyA;gene_biotype=protein_coding;locus_tag=SDY_1088
NC_007606.1	RefSeq	CDS	1015751	1017238	.	-	0	ID=cds959;Parent=gene1070;Dbxref=Genbank:YP_402742.1,GeneID:3797830;Name=YP_402742.1;Note=''converts 1%2C4-alpha-D-glucans to maltodextrin'';gbkey=CDS;gene=amyA;product=alpha-amylase;protein_id=YP_402742.1;transl_table=11
NC_007606.1	RefSeq	gene	1017316	1017681	.	-	.	ID=gene1071;Dbxref=GeneID:3797831;Name=fliT;Note=SDY1089%3B contains in-frame stop codon%3B original product: flagellar biosynthesis%3B repressor of class 3a and 3b operons (RflA activity);gbkey=Gene;gene=fliT;gene_biotype=pseudogene;locus_tag=SDY_1089;pseudo=true
NC_007606.1	RefSeq	gene	1017681	1018091	.	-	.	ID=gene1072;Dbxref=GeneID:3797832;Name=fliS;Note=SDY1090;gbkey=Gene;gene=fliS;gene_biotype=protein_coding;locus_tag=SDY_1090
NC_007606.1	RefSeq	CDS	1017681	1018091	.	-	0	ID=cds960;Parent=gene1072;Dbxref=Genbank:YP_402743.1,GeneID:3797832;Name=YP_402743.1;Note=flagellin specific chaperone;gbkey=CDS;gene=fliS;product=flagellar protein FliS;protein_id=YP_402743.1;transl_table=11
NC_007606.1	RefSeq	gene	1018116	1019513	.	-	.	ID=gene1073;Dbxref=GeneID:3797833;Name=fliD;Note=SDY1091;gbkey=Gene;gene=fliD;gene_biotype=protein_coding;locus_tag=SDY_1091
NC_007606.1	RefSeq	CDS	1018116	1019513	.	-	0	ID=cds961;Parent=gene1073;Dbxref=Genbank:YP_402744.1,GeneID:3797833;Name=YP_402744.1;Note=involved in flagellin assembly;gbkey=CDS;gene=fliD;product=flagellar capping protein;protein_id=YP_402744.1;transl_table=11
NC_007606.1	RefSeq	gene	1019779	1021199	.	+	.	ID=gene1074;Dbxref=GeneID:3797834;Name=fliC;Note=''SDY1092%3B contains in-frame stop codon%3B original product: flagellar biosynthesis%3B flagellin%2C filament structural protein'';gbkey=Gene;gene=fliC;gene_biotype=pseudogene;locus_tag=SDY_1092;pseudo=true
NC_007606.1	RefSeq	region	1021119	1021886	.	-	.	ID=id173;gbkey=mobile_element;gene=fliC
NC_007606.1	RefSeq	gene	1021134	1021511	.	-	.	ID=gene1075;Dbxref=GeneID:3797835;Name=insB;Note=SDY1093;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1093
NC_007606.1	RefSeq	CDS	1021134	1021511	.	-	0	ID=cds962;Parent=gene1075;Dbxref=Genbank:YP_402745.1,GeneID:3797835;Name=YP_402745.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402745.1;transl_table=11
NC_007606.1	RefSeq	gene	1021556	1021831	.	-	.	ID=gene1076;Dbxref=GeneID:3797836;Name=insA;Note=SDY1094;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1094
NC_007606.1	RefSeq	CDS	1021556	1021831	.	-	0	ID=cds963;Parent=gene1076;Dbxref=Genbank:YP_402746.1,GeneID:3797836;Name=YP_402746.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402746.1;transl_table=11
NC_007606.1	RefSeq	gene	1022538	1023257	.	+	.	ID=gene1077;Dbxref=GeneID:3797837;Name=fliA;Note=SDY1095;gbkey=Gene;gene=fliA;gene_biotype=protein_coding;locus_tag=SDY_1095
NC_007606.1	RefSeq	CDS	1022538	1023257	.	+	0	ID=cds964;Parent=gene1077;Dbxref=Genbank:YP_402747.1,GeneID:3797837;Name=YP_402747.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor directs late flagellar biosynthesis genes;gbkey=CDS;gene=fliA;product=flagellar biosynthesis sigma factor;protein_id=YP_402747.1;transl_table=11
NC_007606.1	RefSeq	gene	1023267	1023854	.	+	.	ID=gene1078;Dbxref=GeneID:3797838;Name=fliZ;Note=SDY1096;gbkey=Gene;gene=fliZ;gene_biotype=protein_coding;locus_tag=SDY_1096
NC_007606.1	RefSeq	CDS	1023267	1023854	.	+	0	ID=cds965;Parent=gene1078;Dbxref=Genbank:YP_402748.1,GeneID:3797838;Name=YP_402748.1;Note=''expression activator of the class 2 type of flagellar operons%2C essential to achieve maximal cell motility%3B activator of type 1 fimbrial gene expression%3B cell density-responsive regulator%3B FliZ in Salmonella typhimurium induces HilA%2C an activator of invasion genes necessary to achieve full virulence'';gbkey=CDS;gene=fliZ;product=flagella biosynthesis protein FliZ;protein_id=YP_402748.1;transl_table=11
NC_007606.1	RefSeq	gene	1023942	1024742	.	+	.	ID=gene1079;Dbxref=GeneID:3797839;Name=fliY;Note=SDY1097;gbkey=Gene;gene=fliY;gene_biotype=protein_coding;locus_tag=SDY_1097
NC_007606.1	RefSeq	CDS	1023942	1024742	.	+	0	ID=cds966;Parent=gene1079;Dbxref=Genbank:YP_402749.1,GeneID:3797839;Name=YP_402749.1;Note=Code: ET%3B COG: COG0834;gbkey=CDS;gene=fliY;product=cystine transporter subunit;protein_id=YP_402749.1;transl_table=11
NC_007606.1	RefSeq	gene	1024847	1025833	.	+	.	ID=gene1080;Dbxref=GeneID:3797840;Name=yedO;Note=SDY1098;gbkey=Gene;gene=yedO;gene_biotype=protein_coding;locus_tag=SDY_1098
NC_007606.1	RefSeq	CDS	1024847	1025833	.	+	0	ID=cds967;Parent=gene1080;Dbxref=Genbank:YP_402750.2,GeneID:3797840;Name=YP_402750.2;Note=catalyzes the formation of pyruvate from D-cysteine;gbkey=CDS;gene=yedO;product=D-cysteine desulfhydrase;protein_id=YP_402750.2;transl_table=11
NC_007606.1	RefSeq	gene	1025848	1026516	.	+	.	ID=gene1081;Dbxref=GeneID:3797841;Name=yecS;Note=SDY1099;gbkey=Gene;gene=yecS;gene_biotype=protein_coding;locus_tag=SDY_1099
NC_007606.1	RefSeq	CDS	1025848	1026516	.	+	0	ID=cds968;Parent=gene1081;Dbxref=Genbank:YP_402751.1,GeneID:3797841;Name=YP_402751.1;Note=Code: E%3B COG: COG0765;gbkey=CDS;gene=yecS;product=transport system permease;protein_id=YP_402751.1;transl_table=11
NC_007606.1	RefSeq	gene	1026513	1027265	.	+	.	ID=gene1082;Dbxref=GeneID:3797842;Name=yecC;Note=SDY1100;gbkey=Gene;gene=yecC;gene_biotype=protein_coding;locus_tag=SDY_1100
NC_007606.1	RefSeq	CDS	1026513	1027265	.	+	0	ID=cds969;Parent=gene1082;Dbxref=Genbank:YP_402752.1,GeneID:3797842;Name=YP_402752.1;Note=Code: E%3B COG: COG1126;gbkey=CDS;gene=yecC;product=amino-acid ABC transporter ATP-binding protein YecC;protein_id=YP_402752.1;transl_table=11
NC_007606.1	RefSeq	region	1028051	1028816	.	+	.	ID=id174;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1028108	1028380	.	+	.	ID=gene1083;Dbxref=GeneID:18262999;Name=SDY_1101a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1101a
NC_007606.1	RefSeq	CDS	1028108	1028380	.	+	0	ID=cds970;Parent=gene1083;Dbxref=Genbank:YP_009000686.1,GeneID:18262999;Name=YP_009000686.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000686.1;transl_table=11
NC_007606.1	RefSeq	gene	1028407	1028802	.	+	.	ID=gene1084;Dbxref=GeneID:3797844;Name=SDY_1102;Note=SDY1102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1102
NC_007606.1	RefSeq	CDS	1028407	1028802	.	+	0	ID=cds971;Parent=gene1084;Dbxref=Genbank:YP_402753.1,GeneID:3797844;Name=YP_402753.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402753.1;transl_table=11
NC_007606.1	RefSeq	gene	1029059	1029283	.	-	.	ID=gene1085;Dbxref=GeneID:3797845;Name=yecF;Note=SDY1103;gbkey=Gene;gene=yecF;gene_biotype=protein_coding;locus_tag=SDY_1103
NC_007606.1	RefSeq	CDS	1029059	1029283	.	-	0	ID=cds972;Parent=gene1085;Dbxref=Genbank:YP_402754.1,GeneID:3797845;Name=YP_402754.1;gbkey=CDS;gene=yecF;product=hypothetical protein;protein_id=YP_402754.1;transl_table=11
NC_007606.1	RefSeq	gene	1029742	1030398	.	+	.	ID=gene1086;Dbxref=GeneID:3795445;Name=uvrY;Note=SDY1104;gbkey=Gene;gene=uvrY;gene_biotype=protein_coding;gene_synonym=sirA;locus_tag=SDY_1104
NC_007606.1	RefSeq	CDS	1029742	1030398	.	+	0	ID=cds973;Parent=gene1086;Dbxref=Genbank:YP_402755.1,GeneID:3795445;Name=YP_402755.1;Note=in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system%3B in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system;gbkey=CDS;gene=uvrY;product=response regulator;protein_id=YP_402755.1;transl_table=11
NC_007606.1	RefSeq	gene	1030395	1032122	.	+	.	ID=gene1087;Dbxref=GeneID:3795446;Name=uvrC;Note=SDY1105;gbkey=Gene;gene=uvrC;gene_biotype=protein_coding;locus_tag=SDY_1105
NC_007606.1	RefSeq	CDS	1030395	1032122	.	+	0	ID=cds974;Parent=gene1087;Dbxref=Genbank:YP_402756.2,GeneID:3795446;Name=YP_402756.2;Note=The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision;gbkey=CDS;gene=uvrC;product=excinuclease ABC subunit C;protein_id=YP_402756.2;transl_table=11
NC_007606.1	RefSeq	gene	1032286	1032834	.	+	.	ID=gene1088;Dbxref=GeneID:3795447;Name=pgsA;Note=SDY1106;gbkey=Gene;gene=pgsA;gene_biotype=protein_coding;locus_tag=SDY_1106
NC_007606.1	RefSeq	CDS	1032286	1032834	.	+	0	ID=cds975;Parent=gene1088;Dbxref=Genbank:YP_402757.1,GeneID:3795447;Name=YP_402757.1;Note=Code: I%3B COG: COG0558;gbkey=CDS;gene=pgsA;product=phosphatidylglycerophosphate synthetase;protein_id=YP_402757.1;transl_table=11
NC_007606.1	RefSeq	gene	1032986	1033061	.	+	.	ID=gene1089;Dbxref=GeneID:3795448;Name=SDY_1107;Note=SDY1107;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1107
NC_007606.1	RefSeq	tRNA	1032986	1033061	.	+	.	ID=rna27;Parent=gene1089;Dbxref=GeneID:3795448;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	exon	1032986	1033061	.	+	.	ID=id175;Parent=rna27;Dbxref=GeneID:3795448;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	gene	1033116	1033189	.	+	.	ID=gene1090;Dbxref=GeneID:3795449;Name=SDY_1108;Note=SDY1108;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1108
NC_007606.1	RefSeq	tRNA	1033116	1033189	.	+	.	ID=rna28;Parent=gene1090;Dbxref=GeneID:3795449;codons=13;gbkey=tRNA;product=tRNA-Cys
NC_007606.1	RefSeq	exon	1033116	1033189	.	+	.	ID=id176;Parent=rna28;Dbxref=GeneID:3795449;codons=13;gbkey=tRNA;product=tRNA-Cys
NC_007606.1	RefSeq	gene	1033202	1033288	.	+	.	ID=gene1091;Dbxref=GeneID:3795450;Name=SDY_1109;Note=SDY1109;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1109
NC_007606.1	RefSeq	tRNA	1033202	1033288	.	+	.	ID=rna29;Parent=gene1091;Dbxref=GeneID:3795450;codons=2;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	exon	1033202	1033288	.	+	.	ID=id177;Parent=rna29;Dbxref=GeneID:3795450;codons=2;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	gene	1033484	1034149	.	+	.	ID=gene1092;Dbxref=GeneID:3795451;Name=yecA;Note=SDY1110;gbkey=Gene;gene=yecA;gene_biotype=protein_coding;locus_tag=SDY_1110
NC_007606.1	RefSeq	CDS	1033484	1034149	.	+	0	ID=cds976;Parent=gene1092;Dbxref=Genbank:YP_402758.1,GeneID:3795451;Name=YP_402758.1;Note=Code: R%3B COG: COG3318;gbkey=CDS;gene=yecA;product=hypothetical protein;protein_id=YP_402758.1;transl_table=11
NC_007606.1	RefSeq	gene	1034211	1035422	.	-	.	ID=gene1093;Dbxref=GeneID:3795452;Name=tyrP;Note=SDY1111;gbkey=Gene;gene=tyrP;gene_biotype=protein_coding;locus_tag=SDY_1111
NC_007606.1	RefSeq	CDS	1034211	1035422	.	-	0	ID=cds977;Parent=gene1093;Dbxref=Genbank:YP_402759.1,GeneID:3795452;Name=YP_402759.1;Note=Code: E%3B COG: COG0814;gbkey=CDS;gene=tyrP;product=tyrosine-specific transporter;protein_id=YP_402759.1;transl_table=11
NC_007606.1	RefSeq	gene	1035614	1035853	.	+	.	ID=gene1094;Dbxref=GeneID:3795453;Name=yecH;Note=SDY1112;gbkey=Gene;gene=yecH;gene_biotype=protein_coding;locus_tag=SDY_1112
NC_007606.1	RefSeq	CDS	1035614	1035853	.	+	0	ID=cds978;Parent=gene1094;Dbxref=Genbank:YP_402760.1,GeneID:3795453;Name=YP_402760.1;gbkey=CDS;gene=yecH;product=hypothetical protein;protein_id=YP_402760.1;transl_table=11
NC_007606.1	RefSeq	gene	1035891	1036388	.	-	.	ID=gene1095;Dbxref=GeneID:3795454;Name=ftn;Note=SDY1113;gbkey=Gene;gene=ftn;gene_biotype=protein_coding;locus_tag=SDY_1113
NC_007606.1	RefSeq	CDS	1035891	1036388	.	-	0	ID=cds979;Parent=gene1095;Dbxref=Genbank:YP_402761.1,GeneID:3795454;Name=YP_402761.1;Note=cytoplasmic iron storage protein;gbkey=CDS;gene=ftn;product=ferritin;protein_id=YP_402761.1;transl_table=11
NC_007606.1	RefSeq	gene	1036559	1036882	.	-	.	ID=gene1096;Dbxref=GeneID:3795455;Name=SDY_1114;Note=SDY1114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1114
NC_007606.1	RefSeq	CDS	1036559	1036882	.	-	0	ID=cds980;Parent=gene1096;Dbxref=Genbank:YP_402762.1,GeneID:3795455;Name=YP_402762.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402762.1;transl_table=11
NC_007606.1	RefSeq	region	1037079	1037844	.	-	.	ID=id178;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1037093	1037488	.	-	.	ID=gene1097;Dbxref=GeneID:3795456;Name=SDY_1115;Note=SDY1115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1115
NC_007606.1	RefSeq	CDS	1037093	1037488	.	-	0	ID=cds981;Parent=gene1097;Dbxref=Genbank:YP_402763.1,GeneID:3795456;Name=YP_402763.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402763.1;transl_table=11
NC_007606.1	RefSeq	gene	1037515	1037787	.	-	.	ID=gene1098;Dbxref=GeneID:18263000;Name=SDY_1115a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1115a
NC_007606.1	RefSeq	CDS	1037515	1037787	.	-	0	ID=cds982;Parent=gene1098;Dbxref=Genbank:YP_009000687.1,GeneID:18263000;Name=YP_009000687.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000687.1;transl_table=11
NC_007606.1	RefSeq	gene	1038290	1038793	.	+	.	ID=gene1099;Dbxref=GeneID:3795457;Name=yecI;Note=SDY1116;gbkey=Gene;gene=yecI;gene_biotype=protein_coding;locus_tag=SDY_1116
NC_007606.1	RefSeq	CDS	1038290	1038793	.	+	0	ID=cds983;Parent=gene1099;Dbxref=Genbank:YP_402764.1,GeneID:3795457;Name=YP_402764.1;Note=Code: P%3B COG: COG1528;gbkey=CDS;gene=yecI;product=ferritin;protein_id=YP_402764.1;transl_table=11
NC_007606.1	RefSeq	gene	1038872	1039123	.	-	.	ID=gene1100;Dbxref=GeneID:3795458;Name=SDY_1117;Note=SDY1117;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1117
NC_007606.1	RefSeq	CDS	1038872	1039123	.	-	0	ID=cds984;Parent=gene1100;Dbxref=Genbank:YP_402765.1,GeneID:3795458;Name=YP_402765.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402765.1;transl_table=11
NC_007606.1	RefSeq	region	1039398	1040162	.	-	.	ID=id179;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1039412	1039807	.	-	.	ID=gene1101;Dbxref=GeneID:3795460;Name=SDY_1119;Note=SDY1119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1119
NC_007606.1	RefSeq	CDS	1039412	1039807	.	-	0	ID=cds985;Parent=gene1101;Dbxref=Genbank:YP_402766.1,GeneID:3795460;Name=YP_402766.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402766.1;transl_table=11
NC_007606.1	RefSeq	gene	1040222	1041211	.	+	.	ID=gene1102;Dbxref=GeneID:3799748;Name=araF;Note=SDY1120;gbkey=Gene;gene=araF;gene_biotype=protein_coding;locus_tag=SDY_1120
NC_007606.1	RefSeq	CDS	1040222	1041211	.	+	0	ID=cds986;Parent=gene1102;Dbxref=Genbank:YP_402768.1,GeneID:3799748;Name=YP_402768.1;Note=Code: G%3B COG: COG1879;gbkey=CDS;gene=araF;product=L-arabinose-binding protein;protein_id=YP_402768.1;transl_table=11
NC_007606.1	RefSeq	gene	1041281	1042795	.	+	.	ID=gene1103;Dbxref=GeneID:3799749;Name=araG;Note=SDY1121;gbkey=Gene;gene=araG;gene_biotype=protein_coding;locus_tag=SDY_1121
NC_007606.1	RefSeq	CDS	1041281	1042795	.	+	0	ID=cds987;Parent=gene1103;Dbxref=Genbank:YP_402769.1,GeneID:3799749;Name=YP_402769.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araG;product=L-arabinose ABC transporter ATP-binding protein;protein_id=YP_402769.1;transl_table=11
NC_007606.1	RefSeq	gene	1042807	1043796	.	+	.	ID=gene1104;Dbxref=GeneID:3799750;Name=araH;Note=SDY1122;gbkey=Gene;gene=araH;gene_biotype=protein_coding;locus_tag=SDY_1122
NC_007606.1	RefSeq	CDS	1042807	1043796	.	+	0	ID=cds988;Parent=gene1104;Dbxref=Genbank:YP_402770.1,GeneID:3799750;Name=YP_402770.1;Note=Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose;gbkey=CDS;gene=araH;product=L-arabinose ABC transporter permease;protein_id=YP_402770.1;transl_table=11
NC_007606.1	RefSeq	region	1044276	1045539	.	+	.	ID=id180;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1044340	1044642	.	+	.	ID=gene1105;Dbxref=GeneID:3799751;Name=SDY_1123;Note=SDY1123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1123
NC_007606.1	RefSeq	CDS	1044340	1044642	.	+	0	ID=cds989;Parent=gene1105;Dbxref=Genbank:YP_402771.1,GeneID:3799751;Name=YP_402771.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402771.1;transl_table=11
NC_007606.1	RefSeq	gene	1044783	1045554	.	+	.	ID=gene1106;Dbxref=GeneID:3799752;Name=SDY_1124;Note=SDY1124;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1124;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1046365	1046706	.	-	.	ID=gene1107;Dbxref=GeneID:3799753;Name=SDY_1125;Note=SDY1125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1125
NC_007606.1	RefSeq	CDS	1046365	1046706	.	-	0	ID=cds990;Parent=gene1107;Dbxref=Genbank:YP_402773.1,GeneID:3799753;Name=YP_402773.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402773.1;transl_table=11
NC_007606.1	RefSeq	gene	1046719	1047592	.	-	.	ID=gene1108;Dbxref=GeneID:3799754;Name=SDY_1126;Note=SDY1126;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1126;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1047596	1047970	.	-	.	ID=gene1109;Dbxref=GeneID:3799755;Name=SDY_1127;Note=SDY1127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1127
NC_007606.1	RefSeq	CDS	1047596	1047970	.	-	0	ID=cds991;Parent=gene1109;Dbxref=Genbank:YP_402775.1,GeneID:3799755;Name=YP_402775.1;Note=Code: R%3B COG: COG2372;gbkey=CDS;product=hypothetical protein;protein_id=YP_402775.1;transl_table=11
NC_007606.1	RefSeq	gene	1048109	1048339	.	+	.	ID=gene1110;Dbxref=GeneID:3799756;Name=holE;Note=SDY1128;gbkey=Gene;gene=holE;gene_biotype=protein_coding;locus_tag=SDY_1128
NC_007606.1	RefSeq	CDS	1048109	1048339	.	+	0	ID=cds992;Parent=gene1110;Dbxref=Genbank:YP_402776.1,GeneID:3799756;Name=YP_402776.1;gbkey=CDS;gene=holE;product=DNA polymerase III subunit theta;protein_id=YP_402776.1;transl_table=11
NC_007606.1	RefSeq	gene	1048441	1049097	.	+	.	ID=gene1111;Dbxref=GeneID:3799757;Name=SDY_1129;Note=SDY1129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1129
NC_007606.1	RefSeq	CDS	1048441	1049097	.	+	0	ID=cds993;Parent=gene1111;Dbxref=Genbank:YP_402777.1,GeneID:3799757;Name=YP_402777.1;Note=Code: R%3B COG: COG0388;gbkey=CDS;product=hypothetical protein;protein_id=YP_402777.1;transl_table=11
NC_007606.1	RefSeq	gene	1049121	1049783	.	+	.	ID=gene1112;Dbxref=GeneID:3799758;Name=SDY_1130;Note=SDY1130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1130
NC_007606.1	RefSeq	CDS	1049121	1049783	.	+	0	ID=cds994;Parent=gene1112;Dbxref=Genbank:YP_402778.1,GeneID:3799758;Name=YP_402778.1;Note=3'-5' exonuclease activity on single or double-strand DNA;gbkey=CDS;product=exodeoxyribonuclease X;protein_id=YP_402778.1;transl_table=11
NC_007606.1	RefSeq	gene	1049780	1051840	.	-	.	ID=gene1113;Dbxref=GeneID:3799759;Name=ptrB;Note=SDY1131;gbkey=Gene;gene=ptrB;gene_biotype=protein_coding;locus_tag=SDY_1131
NC_007606.1	RefSeq	CDS	1049780	1051840	.	-	0	ID=cds995;Parent=gene1113;Dbxref=Genbank:YP_402779.1,GeneID:3799759;Name=YP_402779.1;Note=PtrB%3B oligopeptidase that cleaves peptide bonds following arginine and lysine residues;gbkey=CDS;gene=ptrB;product=protease 2;protein_id=YP_402779.1;transl_table=11
NC_007606.1	RefSeq	gene	1052049	1052708	.	-	.	ID=gene1114;Dbxref=GeneID:3799760;Name=yebE;Note=SDY1132;gbkey=Gene;gene=yebE;gene_biotype=protein_coding;locus_tag=SDY_1132
NC_007606.1	RefSeq	CDS	1052049	1052708	.	-	0	ID=cds996;Parent=gene1114;Dbxref=Genbank:YP_402780.1,GeneID:3799760;Name=YP_402780.1;Note=Code: S%3B COG: COG2979;gbkey=CDS;gene=yebE;product=hypothetical protein;protein_id=YP_402780.1;transl_table=11
NC_007606.1	RefSeq	gene	1053032	1053400	.	-	.	ID=gene1115;Dbxref=GeneID:3799761;Name=yebF;Note=SDY1133;gbkey=Gene;gene=yebF;gene_biotype=protein_coding;locus_tag=SDY_1133
NC_007606.1	RefSeq	CDS	1053032	1053400	.	-	0	ID=cds997;Parent=gene1115;Dbxref=Genbank:YP_402781.1,GeneID:3799761;Name=YP_402781.1;Note=secreted protein%3B unknown function;gbkey=CDS;gene=yebF;product=hypothetical protein;protein_id=YP_402781.1;transl_table=11
NC_007606.1	RefSeq	gene	1053455	1053745	.	-	.	ID=gene1116;Dbxref=GeneID:3799762;Name=yebG;Note=SDY1134;gbkey=Gene;gene=yebG;gene_biotype=protein_coding;locus_tag=SDY_1134
NC_007606.1	RefSeq	CDS	1053455	1053745	.	-	0	ID=cds998;Parent=gene1116;Dbxref=Genbank:YP_402782.1,GeneID:3799762;Name=YP_402782.1;Note=Code: S%3B COG: COG3141;gbkey=CDS;gene=yebG;product=DNA damage-inducible protein YebG;protein_id=YP_402782.1;transl_table=11
NC_007606.1	RefSeq	gene	1053879	1055057	.	+	.	ID=gene1117;Dbxref=GeneID:3799763;Name=purT;Note=SDY1135;gbkey=Gene;gene=purT;gene_biotype=protein_coding;locus_tag=SDY_1135
NC_007606.1	RefSeq	CDS	1053879	1055057	.	+	0	ID=cds999;Parent=gene1117;Dbxref=Genbank:YP_402783.1,GeneID:3799763;Name=YP_402783.1;Note=''non-folate utilizing enzyme%2C catalyzes the production of beta-formyl glycinamide ribonucleotide from formate%2C ATP%2C and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP%3B involved in de novo purine biosynthesis'';gbkey=CDS;gene=purT;product=phosphoribosylglycinamide formyltransferase 2;protein_id=YP_402783.1;transl_table=11
NC_007606.1	RefSeq	gene	1055113	1055754	.	-	.	ID=gene1118;Dbxref=GeneID:3799764;Name=eda;Note=SDY1136;gbkey=Gene;gene=eda;gene_biotype=protein_coding;locus_tag=SDY_1136
NC_007606.1	RefSeq	CDS	1055113	1055754	.	-	0	ID=cds1000;Parent=gene1118;Dbxref=Genbank:YP_402784.1,GeneID:3799764;Name=YP_402784.1;Note=catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate%3B or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate;gbkey=CDS;gene=eda;product=keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase;protein_id=YP_402784.1;transl_table=11
NC_007606.1	RefSeq	gene	1055791	1057602	.	-	.	ID=gene1119;Dbxref=GeneID:3799765;Name=edd;Note=SDY1137;gbkey=Gene;gene=edd;gene_biotype=protein_coding;locus_tag=SDY_1137
NC_007606.1	RefSeq	CDS	1055791	1057602	.	-	0	ID=cds1001;Parent=gene1119;Dbxref=Genbank:YP_402785.1,GeneID:3799765;Name=YP_402785.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate;gbkey=CDS;gene=edd;product=phosphogluconate dehydratase;protein_id=YP_402785.1;transl_table=11
NC_007606.1	RefSeq	gene	1057837	1059312	.	-	.	ID=gene1120;Dbxref=GeneID:3799766;Name=zwf;Note=SDY1138;gbkey=Gene;gene=zwf;gene_biotype=protein_coding;locus_tag=SDY_1138
NC_007606.1	RefSeq	CDS	1057837	1059312	.	-	0	ID=cds1002;Parent=gene1120;Dbxref=Genbank:YP_402786.1,GeneID:3799766;Name=YP_402786.1;Note=''catalyzes the formation of D-glucono-1%2C5-lactone 6-phosphate from D-glucose 6-phosphate'';gbkey=CDS;gene=zwf;product=glucose-6-phosphate 1-dehydrogenase;protein_id=YP_402786.1;transl_table=11
NC_007606.1	RefSeq	gene	1059650	1060518	.	+	.	ID=gene1121;Dbxref=GeneID:3799767;Name=SDY_1139;Note=SDY1139;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1139;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1060646	1062088	.	+	.	ID=gene1122;Dbxref=GeneID:3795462;Name=pykA;Note=SDY1141;gbkey=Gene;gene=pykA;gene_biotype=protein_coding;locus_tag=SDY_1141
NC_007606.1	RefSeq	CDS	1060646	1062088	.	+	0	ID=cds1003;Parent=gene1122;Dbxref=Genbank:YP_402789.1,GeneID:3795462;Name=YP_402789.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;gene=pykA;product=pyruvate kinase;protein_id=YP_402789.1;transl_table=11
NC_007606.1	RefSeq	gene	1062219	1063190	.	-	.	ID=gene1123;Dbxref=GeneID:3795463;Name=msbB;Note=SDY1142;gbkey=Gene;gene=msbB;gene_biotype=protein_coding;locus_tag=SDY_1142
NC_007606.1	RefSeq	CDS	1062219	1063190	.	-	0	ID=cds1004;Parent=gene1123;Dbxref=Genbank:YP_402790.1,GeneID:3795463;Name=YP_402790.1;Note=''Transfers myristate or laurate%2C activated on ACP%2C to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA'';gbkey=CDS;gene=msbB;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=YP_402790.1;transl_table=11
NC_007606.1	RefSeq	gene	1063310	1064632	.	-	.	ID=gene1124;Dbxref=GeneID:3795464;Name=yebA;Note=SDY1143;gbkey=Gene;gene=yebA;gene_biotype=protein_coding;locus_tag=SDY_1143
NC_007606.1	RefSeq	CDS	1063310	1064632	.	-	0	ID=cds1005;Parent=gene1124;Dbxref=Genbank:YP_402791.2,GeneID:3795464;Name=YP_402791.2;Note=Code: M%3B COG: COG0739;gbkey=CDS;gene=yebA;product=hypothetical protein;protein_id=YP_402791.2;transl_table=11
NC_007606.1	RefSeq	gene	1064648	1065580	.	-	.	ID=gene1125;Dbxref=GeneID:3795465;Name=znuA;Note=SDY1144;gbkey=Gene;gene=znuA;gene_biotype=protein_coding;gene_synonym=yebL;locus_tag=SDY_1144
NC_007606.1	RefSeq	CDS	1064648	1065580	.	-	0	ID=cds1006;Parent=gene1125;Dbxref=Genbank:YP_402792.2,GeneID:3795465;Name=YP_402792.2;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuA;product=high-affinity zinc ABC transporter substrate-binding protein;protein_id=YP_402792.2;transl_table=11
NC_007606.1	RefSeq	gene	1065659	1066414	.	+	.	ID=gene1126;Dbxref=GeneID:3795466;Name=znuC;Note=SDY1145;gbkey=Gene;gene=znuC;gene_biotype=protein_coding;gene_synonym=yebM;locus_tag=SDY_1145
NC_007606.1	RefSeq	CDS	1065659	1066414	.	+	0	ID=cds1007;Parent=gene1126;Dbxref=Genbank:YP_402793.1,GeneID:3795466;Name=YP_402793.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuC;product=high-affinity zinc ABC transporter ATPase;protein_id=YP_402793.1;transl_table=11
NC_007606.1	RefSeq	gene	1066411	1067196	.	+	.	ID=gene1127;Dbxref=GeneID:3795467;Name=znuB;Note=SDY1146;gbkey=Gene;gene=znuB;gene_biotype=protein_coding;gene_synonym=yebI;locus_tag=SDY_1146
NC_007606.1	RefSeq	CDS	1066411	1067196	.	+	0	ID=cds1008;Parent=gene1127;Dbxref=Genbank:YP_402794.1,GeneID:3795467;Name=YP_402794.1;Note=involved in transport of zinc(II) with ZnuA and C;gbkey=CDS;gene=znuB;product=high-affinity zinc ABC transporter permease;protein_id=YP_402794.1;transl_table=11
NC_007606.1	RefSeq	gene	1067343	1068353	.	-	.	ID=gene1128;Dbxref=GeneID:3795468;Name=ruvB;Note=SDY1147;gbkey=Gene;gene=ruvB;gene_biotype=protein_coding;locus_tag=SDY_1147
NC_007606.1	RefSeq	CDS	1067343	1068353	.	-	0	ID=cds1009;Parent=gene1128;Dbxref=Genbank:YP_402795.1,GeneID:3795468;Name=YP_402795.1;Note=promotes strand exchange during homologous recombination%3B RuvAB complex promotes branch migration%3B RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences%3B forms hexameric rings around opposite DNA arms%3B requires ATP for branch migration and orientation of RuvAB complex determines direction of migration;gbkey=CDS;gene=ruvB;product=Holliday junction DNA helicase RuvB;protein_id=YP_402795.1;transl_table=11
NC_007606.1	RefSeq	gene	1068362	1068973	.	-	.	ID=gene1129;Dbxref=GeneID:3795469;Name=ruvA;Note=SDY1148;gbkey=Gene;gene=ruvA;gene_biotype=protein_coding;locus_tag=SDY_1148
NC_007606.1	RefSeq	CDS	1068362	1068973	.	-	0	ID=cds1010;Parent=gene1129;Dbxref=Genbank:YP_402796.1,GeneID:3795469;Name=YP_402796.1;Note=plays an essential role in ATP-dependent branch migration of the Holliday junction;gbkey=CDS;gene=ruvA;product=Holliday junction DNA helicase RuvA;protein_id=YP_402796.1;transl_table=11
NC_007606.1	RefSeq	gene	1069248	1069850	.	+	.	ID=gene1130;Dbxref=GeneID:3795470;Name=yebB;Note=SDY1149;gbkey=Gene;gene=yebB;gene_biotype=protein_coding;locus_tag=SDY_1149
NC_007606.1	RefSeq	CDS	1069248	1069850	.	+	0	ID=cds1011;Parent=gene1130;Dbxref=Genbank:YP_402797.2,GeneID:3795470;Name=YP_402797.2;gbkey=CDS;gene=yebB;product=hypothetical protein;protein_id=YP_402797.2;transl_table=11
NC_007606.1	RefSeq	gene	1069852	1070373	.	-	.	ID=gene1131;Dbxref=GeneID:3795471;Name=ruvC;Note=SDY1150;gbkey=Gene;gene=ruvC;gene_biotype=protein_coding;locus_tag=SDY_1150
NC_007606.1	RefSeq	CDS	1069852	1070373	.	-	0	ID=cds1012;Parent=gene1131;Dbxref=Genbank:YP_402798.1,GeneID:3795471;Name=YP_402798.1;Note=endonuclease%3B resolves Holliday structures%3B forms a complex of RuvABC%3B the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration%3B RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity;gbkey=CDS;gene=ruvC;product=Holliday junction resolvase;protein_id=YP_402798.1;transl_table=11
NC_007606.1	RefSeq	gene	1070408	1071148	.	-	.	ID=gene1132;Dbxref=GeneID:3795472;Name=yebC;Note=SDY1151;gbkey=Gene;gene=yebC;gene_biotype=protein_coding;locus_tag=SDY_1151
NC_007606.1	RefSeq	CDS	1070408	1071148	.	-	0	ID=cds1013;Parent=gene1132;Dbxref=Genbank:YP_402799.1,GeneID:3795472;Name=YP_402799.1;Note=Code: S%3B COG: COG0217;gbkey=CDS;gene=yebC;product=hypothetical protein;protein_id=YP_402799.1;transl_table=11
NC_007606.1	RefSeq	gene	1071177	1071629	.	-	.	ID=gene1133;Dbxref=GeneID:3795473;Name=ntpA;Note=SDY1152;gbkey=Gene;gene=ntpA;gene_biotype=protein_coding;locus_tag=SDY_1152
NC_007606.1	RefSeq	CDS	1071177	1071629	.	-	0	ID=cds1014;Parent=gene1133;Dbxref=Genbank:YP_402800.1,GeneID:3795473;Name=YP_402800.1;Note=converts dATP to dAMP and pyrophosphate;gbkey=CDS;gene=ntpA;product=dATP pyrophosphohydrolase;protein_id=YP_402800.1;transl_table=11
NC_007606.1	RefSeq	gene	1071747	1073519	.	-	.	ID=gene1134;Dbxref=GeneID:3795474;Name=aspS;Note=SDY1153;gbkey=Gene;gene=aspS;gene_biotype=protein_coding;locus_tag=SDY_1153
NC_007606.1	RefSeq	CDS	1071747	1073519	.	-	0	ID=cds1015;Parent=gene1134;Dbxref=Genbank:YP_402801.1,GeneID:3795474;Name=YP_402801.1;Note=''catalyzes a two-step reaction%2C first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B contains discriminating and non-discriminating subtypes'';gbkey=CDS;gene=aspS;product=aspartyl-tRNA synthetase;protein_id=YP_402801.1;transl_table=11
NC_007606.1	RefSeq	gene	1073829	1074083	.	+	.	ID=gene1135;Dbxref=GeneID:3795475;Name=SDY_1154;Note=SDY1154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1154
NC_007606.1	RefSeq	CDS	1073829	1074083	.	+	0	ID=cds1016;Parent=gene1135;Dbxref=Genbank:YP_402802.1,GeneID:3795475;Name=YP_402802.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402802.1;transl_table=11
NC_007606.1	RefSeq	region	1074129	1075501	.	-	.	ID=id181;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1074275	1075471	.	+	.	ID=gene1136;Dbxref=GeneID:3795476;Name=SDY_1155;Note=SDY1155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1155
NC_007606.1	RefSeq	CDS	1074275	1075471	.	+	0	ID=cds1017;Parent=gene1136;Dbxref=Genbank:YP_402803.1,GeneID:3795476;Name=YP_402803.1;Note=Code: L%3B COG: COG3547;gbkey=CDS;product=insertion element IS110 transposase;protein_id=YP_402803.1;transl_table=11
NC_007606.1	RefSeq	region	1075919	1076684	.	+	.	ID=id182;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1075974	1076249	.	+	.	ID=gene1137;Dbxref=GeneID:3795477;Name=insA;Note=SDY1156;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1156
NC_007606.1	RefSeq	CDS	1075974	1076249	.	+	0	ID=cds1018;Parent=gene1137;Dbxref=Genbank:YP_402804.1,GeneID:3795477;Name=YP_402804.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402804.1;transl_table=11
NC_007606.1	RefSeq	gene	1076271	1076669	.	+	.	ID=gene1138;Dbxref=GeneID:3795478;Name=insB;Note=SDY1157;gbkey=Gene;gene=insB;gene_biotype=pseudogene;locus_tag=SDY_1157;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1077699	1078948	.	+	.	ID=id183;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1077771	1078073	.	+	.	ID=gene1139;Dbxref=GeneID:3795479;Name=SDY_1158;Note=SDY1158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1158
NC_007606.1	RefSeq	CDS	1077771	1078073	.	+	0	ID=cds1019;Parent=gene1139;Dbxref=Genbank:YP_402806.1,GeneID:3795479;Name=YP_402806.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_402806.1;transl_table=11
NC_007606.1	RefSeq	region	1079451	1079891	.	-	.	ID=id184;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1079466	1079918	.	-	.	ID=gene1140;Dbxref=GeneID:3796825;Name=insB;Note=SDY1161;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1161
NC_007606.1	RefSeq	CDS	1079466	1079918	.	-	0	ID=cds1020;Parent=gene1140;Dbxref=Genbank:YP_402809.1,GeneID:3796825;Name=YP_402809.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element IS1 4 protein InsB;protein_id=YP_402809.1;transl_table=11
NC_007606.1	RefSeq	region	1079892	1081222	.	-	.	ID=id185;gbkey=mobile_element;gene=insB
NC_007606.1	RefSeq	gene	1079903	1080808	.	-	.	ID=gene1141;Dbxref=GeneID:3796826;Name=SDY_1162;Note=SDY1162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1162
NC_007606.1	RefSeq	CDS	1079903	1080808	.	-	0	ID=cds1021;Parent=gene1141;Dbxref=Genbank:YP_402810.2,GeneID:3796826;Name=YP_402810.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_402810.2;transl_table=11
NC_007606.1	RefSeq	gene	1080766	1081131	.	-	.	ID=gene1142;Dbxref=GeneID:3796827;Name=SDY_1163;Note=SDY1163;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1163
NC_007606.1	RefSeq	CDS	1080766	1081131	.	-	0	ID=cds1022;Parent=gene1142;Dbxref=Genbank:YP_402811.1,GeneID:3796827;Name=YP_402811.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_402811.1;transl_table=11
NC_007606.1	RefSeq	region	1081223	1081554	.	-	.	ID=id186;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1081224	1081499	.	-	.	ID=gene1143;Dbxref=GeneID:3796828;Name=insA;Note=SDY1164;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1164
NC_007606.1	RefSeq	CDS	1081224	1081499	.	-	0	ID=cds1023;Parent=gene1143;Dbxref=Genbank:YP_402812.1,GeneID:3796828;Name=YP_402812.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402812.1;transl_table=11
NC_007606.1	RefSeq	region	1081846	1082611	.	-	.	ID=id187;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1081860	1082255	.	-	.	ID=gene1144;Dbxref=GeneID:3796829;Name=SDY_1165;Note=SDY1165;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1165
NC_007606.1	RefSeq	CDS	1081860	1082255	.	-	0	ID=cds1024;Parent=gene1144;Dbxref=Genbank:YP_402813.1,GeneID:3796829;Name=YP_402813.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402813.1;transl_table=11
NC_007606.1	RefSeq	gene	1082590	1083207	.	-	.	ID=gene1145;Dbxref=GeneID:3796830;Name=SDY_1166;Note=SDY1166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1166
NC_007606.1	RefSeq	CDS	1082590	1083207	.	-	0	ID=cds1025;Parent=gene1145;Dbxref=Genbank:YP_402814.1,GeneID:3796830;Name=YP_402814.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402814.1;transl_table=11
NC_007606.1	RefSeq	gene	1083311	1083658	.	+	.	ID=gene1146;Dbxref=GeneID:3796831;Name=SDY_1167;Note=SDY1167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1167
NC_007606.1	RefSeq	CDS	1083311	1083658	.	+	0	ID=cds1026;Parent=gene1146;Dbxref=Genbank:YP_402815.1,GeneID:3796831;Name=YP_402815.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402815.1;transl_table=11
NC_007606.1	RefSeq	gene	1083711	1084106	.	+	.	ID=gene1147;Dbxref=GeneID:3796832;Name=yecN;Note=SDY1168;gbkey=Gene;gene=yecN;gene_biotype=protein_coding;locus_tag=SDY_1168
NC_007606.1	RefSeq	CDS	1083711	1084106	.	+	0	ID=cds1027;Parent=gene1147;Dbxref=Genbank:YP_402816.2,GeneID:3796832;Name=YP_402816.2;Note=Code: R%3B COG: COG3788;gbkey=CDS;gene=yecN;product=hypothetical protein;protein_id=YP_402816.2;transl_table=11
NC_007606.1	RefSeq	gene	1084147	1084890	.	+	.	ID=gene1148;Dbxref=GeneID:3796833;Name=yecO;Note=SDY1169;gbkey=Gene;gene=yecO;gene_biotype=protein_coding;locus_tag=SDY_1169
NC_007606.1	RefSeq	CDS	1084147	1084890	.	+	0	ID=cds1028;Parent=gene1148;Dbxref=Genbank:YP_402817.1,GeneID:3796833;Name=YP_402817.1;Note=Code: QR%3B COG: COG0500;gbkey=CDS;gene=yecO;product=hypothetical protein;protein_id=YP_402817.1;transl_table=11
NC_007606.1	RefSeq	gene	1084887	1085858	.	+	.	ID=gene1149;Dbxref=GeneID:3796834;Name=yecP;Note=SDY1170;gbkey=Gene;gene=yecP;gene_biotype=protein_coding;locus_tag=SDY_1170
NC_007606.1	RefSeq	CDS	1084887	1085858	.	+	0	ID=cds1029;Parent=gene1149;Dbxref=Genbank:YP_402818.1,GeneID:3796834;Name=YP_402818.1;Note=Code: QR%3B COG: COG0500;gbkey=CDS;gene=yecP;product=S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_402818.1;transl_table=11
NC_007606.1	RefSeq	gene	1086023	1088383	.	-	.	ID=gene1150;Dbxref=GeneID:3796835;Name=bisZ;Note=SDY1171;gbkey=Gene;gene=bisZ;gene_biotype=protein_coding;locus_tag=SDY_1171
NC_007606.1	RefSeq	CDS	1086023	1088383	.	-	0	ID=cds1030;Parent=gene1150;Dbxref=Genbank:YP_402819.1,GeneID:3796835;Name=YP_402819.1;Note=Code: C%3B COG: COG0243;gbkey=CDS;gene=bisZ;product=biotin sulfoxide reductase;protein_id=YP_402819.1;transl_table=11
NC_007606.1	RefSeq	region	1088882	1089646	.	-	.	ID=id188;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1089317	1089589	.	-	.	ID=gene1151;Dbxref=GeneID:18263001;Name=SDY_1174a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1174a
NC_007606.1	RefSeq	CDS	1089317	1089589	.	-	0	ID=cds1031;Parent=gene1151;Dbxref=Genbank:YP_009000688.1,GeneID:18263001;Name=YP_009000688.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000688.1;transl_table=11
NC_007606.1	RefSeq	region	1090029	1090795	.	-	.	ID=id189;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1090044	1090439	.	-	.	ID=gene1152;Dbxref=GeneID:3796838;Name=SDY_1174;Note=SDY1174;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1174
NC_007606.1	RefSeq	CDS	1090044	1090439	.	-	0	ID=cds1032;Parent=gene1152;Dbxref=Genbank:YP_402822.1,GeneID:3796838;Name=YP_402822.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402822.1;transl_table=11
NC_007606.1	RefSeq	gene	1090466	1090738	.	-	.	ID=gene1153;Dbxref=GeneID:18263002;Name=SDY_1176a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1176a
NC_007606.1	RefSeq	CDS	1090466	1090738	.	-	0	ID=cds1033;Parent=gene1153;Dbxref=Genbank:YP_009000689.1,GeneID:18263002;Name=YP_009000689.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000689.1;transl_table=11
NC_007606.1	RefSeq	region	1091331	1092096	.	-	.	ID=id190;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1091345	1091740	.	-	.	ID=gene1154;Dbxref=GeneID:3796840;Name=SDY_1176;Note=SDY1176;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1176
NC_007606.1	RefSeq	CDS	1091345	1091740	.	-	0	ID=cds1034;Parent=gene1154;Dbxref=Genbank:YP_402823.1,GeneID:3796840;Name=YP_402823.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402823.1;transl_table=11
NC_007606.1	RefSeq	gene	1091767	1092039	.	-	.	ID=gene1155;Dbxref=GeneID:18263003;Name=SDY_1178a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1178a
NC_007606.1	RefSeq	CDS	1091767	1092039	.	-	0	ID=cds1035;Parent=gene1155;Dbxref=Genbank:YP_009000690.1,GeneID:18263003;Name=YP_009000690.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000690.1;transl_table=11
NC_007606.1	RefSeq	gene	1092199	1092945	.	-	.	ID=gene1156;Dbxref=GeneID:3796842;Name=cutC;Note=SDY1178;gbkey=Gene;gene=cutC;gene_biotype=protein_coding;locus_tag=SDY_1178
NC_007606.1	RefSeq	CDS	1092199	1092945	.	-	0	ID=cds1036;Parent=gene1156;Dbxref=Genbank:YP_402825.1,GeneID:3796842;Name=YP_402825.1;Note=Code: P%3B COG: COG3142;gbkey=CDS;gene=cutC;product=copper homeostasis protein CutC;protein_id=YP_402825.1;transl_table=11
NC_007606.1	RefSeq	gene	1092959	1093531	.	-	.	ID=gene1157;Dbxref=GeneID:3795480;Name=yecM;Note=SDY1179;gbkey=Gene;gene=yecM;gene_biotype=protein_coding;locus_tag=SDY_1179
NC_007606.1	RefSeq	CDS	1092959	1093531	.	-	0	ID=cds1037;Parent=gene1157;Dbxref=Genbank:YP_402826.1,GeneID:3795480;Name=YP_402826.1;Note=Code: S%3B COG: COG3102;gbkey=CDS;gene=yecM;product=hypothetical protein;protein_id=YP_402826.1;transl_table=11
NC_007606.1	RefSeq	gene	1093741	1095474	.	+	.	ID=gene1158;Dbxref=GeneID:3795481;Name=argS;Note=SDY1180;gbkey=Gene;gene=argS;gene_biotype=protein_coding;locus_tag=SDY_1180
NC_007606.1	RefSeq	CDS	1093741	1095474	.	+	0	ID=cds1038;Parent=gene1158;Dbxref=Genbank:YP_402827.1,GeneID:3795481;Name=YP_402827.1;Note=''catalyzes a two-step reaction%2C first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class-I aminoacyl-tRNA synthetase'';gbkey=CDS;gene=argS;product=arginyl-tRNA synthetase;protein_id=YP_402827.1;transl_table=11
NC_007606.1	RefSeq	region	1095654	1096421	.	+	.	ID=id191;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1095709	1095984	.	+	.	ID=gene1159;Dbxref=GeneID:3795482;Name=insA;Note=SDY1181;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1181
NC_007606.1	RefSeq	CDS	1095709	1095984	.	+	0	ID=cds1039;Parent=gene1159;Dbxref=Genbank:YP_402828.1,GeneID:3795482;Name=YP_402828.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_402828.1;transl_table=11
NC_007606.1	RefSeq	gene	1096029	1096406	.	+	.	ID=gene1160;Dbxref=GeneID:3795483;Name=insB;Note=SDY1182;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1182
NC_007606.1	RefSeq	CDS	1096029	1096406	.	+	0	ID=cds1040;Parent=gene1160;Dbxref=Genbank:YP_402829.1,GeneID:3795483;Name=YP_402829.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402829.1;transl_table=11
NC_007606.1	RefSeq	gene	1097038	1097430	.	-	.	ID=gene1161;Dbxref=GeneID:3795484;Name=flhE;Note=SDY1183;gbkey=Gene;gene=flhE;gene_biotype=protein_coding;locus_tag=SDY_1183
NC_007606.1	RefSeq	CDS	1097038	1097430	.	-	0	ID=cds1041;Parent=gene1161;Dbxref=Genbank:YP_402830.1,GeneID:3795484;Name=YP_402830.1;gbkey=CDS;gene=flhE;product=flagellar protein;protein_id=YP_402830.1;transl_table=11
NC_007606.1	RefSeq	gene	1097430	1098986	.	-	.	ID=gene1162;Dbxref=GeneID:3795485;Name=flhA;Note=SDY1184%3B truncated%3B original product: flagellar biosynthesis%3B possible export of flagellar proteins;gbkey=Gene;gene=flhA;gene_biotype=pseudogene;locus_tag=SDY_1184;pseudo=true
NC_007606.1	RefSeq	region	1099031	1099796	.	-	.	ID=id192;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1099045	1099440	.	-	.	ID=gene1163;Dbxref=GeneID:3795486;Name=SDY_1185;Note=SDY1185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1185
NC_007606.1	RefSeq	CDS	1099045	1099440	.	-	0	ID=cds1042;Parent=gene1163;Dbxref=Genbank:YP_402831.1,GeneID:3795486;Name=YP_402831.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402831.1;transl_table=11
NC_007606.1	RefSeq	region	1099797	1101052	.	+	.	ID=id193;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1099853	1100155	.	+	.	ID=gene1164;Dbxref=GeneID:3795487;Name=SDY_1186;Note=SDY1186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1186
NC_007606.1	RefSeq	CDS	1099853	1100155	.	+	0	ID=cds1043;Parent=gene1164;Dbxref=Genbank:YP_402832.1,GeneID:3795487;Name=YP_402832.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402832.1;transl_table=11
NC_007606.1	RefSeq	gene	1100296	1101009	.	+	.	ID=gene1165;Dbxref=GeneID:3795488;Name=SDY_1187;Note=SDY1187;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1187
NC_007606.1	RefSeq	CDS	1100296	1101009	.	+	0	ID=cds1044;Parent=gene1165;Dbxref=Genbank:YP_402833.1,GeneID:3795488;Name=YP_402833.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402833.1;transl_table=11
NC_007606.1	RefSeq	gene	1101050	1101940	.	-	.	ID=gene1166;Dbxref=GeneID:3795489;Name=motB;Note=''SDY1188%3B contains in-frame stop codon%3B original product: enables flagellar motor rotation%2C linking torque machinery to cell wall'';gbkey=Gene;gene=motB;gene_biotype=pseudogene;locus_tag=SDY_1188;pseudo=true
NC_007606.1	RefSeq	gene	1101937	1102824	.	-	.	ID=gene1167;Dbxref=GeneID:3795490;Name=motA;Note=SDY1189;gbkey=Gene;gene=motA;gene_biotype=protein_coding;locus_tag=SDY_1189
NC_007606.1	RefSeq	CDS	1101937	1102824	.	-	0	ID=cds1045;Parent=gene1167;Dbxref=Genbank:YP_402834.1,GeneID:3795490;Name=YP_402834.1;Note=With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine;gbkey=CDS;gene=motA;product=flagellar motor protein MotA;protein_id=YP_402834.1;transl_table=11
NC_007606.1	RefSeq	gene	1102950	1103495	.	-	.	ID=gene1168;Dbxref=GeneID:3795491;Name=flhC;Note=SDY1190;gbkey=Gene;gene=flhC;gene_biotype=protein_coding;locus_tag=SDY_1190
NC_007606.1	RefSeq	CDS	1102950	1103495	.	-	0	ID=cds1046;Parent=gene1168;Dbxref=Genbank:YP_402835.1,GeneID:3795491;Name=YP_402835.1;Note=With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems;gbkey=CDS;gene=flhC;product=transcriptional activator FlhC;protein_id=YP_402835.1;transl_table=11
NC_007606.1	RefSeq	gene	1103498	1103857	.	-	.	ID=gene1169;Dbxref=GeneID:3795492;Name=flhD;Note=SDY1191;gbkey=Gene;gene=flhD;gene_biotype=protein_coding;locus_tag=SDY_1191
NC_007606.1	RefSeq	CDS	1103498	1103857	.	-	0	ID=cds1047;Parent=gene1169;Dbxref=Genbank:YP_402836.1,GeneID:3795492;Name=YP_402836.1;Note=with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems;gbkey=CDS;gene=flhD;product=transcriptional activator FlhD;protein_id=YP_402836.1;transl_table=11
NC_007606.1	RefSeq	gene	1104628	1105056	.	+	.	ID=gene1170;Dbxref=GeneID:3795493;Name=yecG;Note=SDY1192;gbkey=Gene;gene=yecG;gene_biotype=protein_coding;locus_tag=SDY_1192
NC_007606.1	RefSeq	CDS	1104628	1105056	.	+	0	ID=cds1048;Parent=gene1170;Dbxref=Genbank:YP_402837.1,GeneID:3795493;Name=YP_402837.1;Note=''ppGpp-dependent%3B membrane-associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress'';gbkey=CDS;gene=yecG;product=universal stress protein UspC;protein_id=YP_402837.1;transl_table=11
NC_007606.1	RefSeq	gene	1105063	1106487	.	-	.	ID=gene1171;Dbxref=GeneID:3795494;Name=otsA;Note=SDY1193;gbkey=Gene;gene=otsA;gene_biotype=protein_coding;locus_tag=SDY_1193
NC_007606.1	RefSeq	CDS	1105063	1106487	.	-	0	ID=cds1049;Parent=gene1171;Dbxref=Genbank:YP_402838.1,GeneID:3795494;Name=YP_402838.1;Note=Code: G%3B COG: COG0380;gbkey=CDS;gene=otsA;product=trehalose-6-phosphate synthase;protein_id=YP_402838.1;transl_table=11
NC_007606.1	RefSeq	gene	1106462	1107034	.	-	.	ID=gene1172;Dbxref=GeneID:3795495;Name=otsB;Note=''SDY1194%3B truncated%3B original product: trehalose-6-phosphate phophatase%2C biosynthetic'';gbkey=Gene;gene=otsB;gene_biotype=pseudogene;locus_tag=SDY_1194;pseudo=true
NC_007606.1	RefSeq	region	1107020	1108204	.	-	.	ID=id194;Note=fragment;gbkey=mobile_element;gene=otsB
NC_007606.1	RefSeq	gene	1107028	1107867	.	-	.	ID=gene1173;Dbxref=GeneID:3795496;Name=SDY_1195;Note=SDY1195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1195
NC_007606.1	RefSeq	CDS	1107028	1107867	.	-	0	ID=cds1050;Parent=gene1173;Dbxref=Genbank:YP_402839.1,GeneID:3795496;Name=YP_402839.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS911 integrase core domain-containing protein;protein_id=YP_402839.1;transl_table=11
NC_007606.1	RefSeq	gene	1107894	1108220	.	-	.	ID=gene1174;Dbxref=GeneID:3795497;Name=SDY_1196;Note=SDY1196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1196
NC_007606.1	RefSeq	CDS	1107894	1108220	.	-	0	ID=cds1051;Parent=gene1174;Dbxref=Genbank:YP_402840.1,GeneID:3795497;Name=YP_402840.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_402840.1;transl_table=11
NC_007606.1	RefSeq	gene	1108193	1108963	.	-	.	ID=gene1175;Dbxref=GeneID:3795498;Name=SDY_1197;Note=SDY1197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1197
NC_007606.1	RefSeq	CDS	1108193	1108963	.	-	0	ID=cds1052;Parent=gene1175;Dbxref=Genbank:YP_402841.1,GeneID:3795498;Name=YP_402841.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_402841.1;transl_table=11
NC_007606.1	RefSeq	region	1108205	1109424	.	-	.	ID=id195;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1109104	1109406	.	-	.	ID=gene1176;Dbxref=GeneID:3795596;Name=SDY_1198;Note=SDY1198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1198
NC_007606.1	RefSeq	CDS	1109104	1109406	.	-	0	ID=cds1053;Parent=gene1176;Dbxref=Genbank:YP_402842.1,GeneID:3795596;Name=YP_402842.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402842.1;transl_table=11
NC_007606.1	RefSeq	region	1109428	1110195	.	+	.	ID=id196;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1109483	1109758	.	+	.	ID=gene1177;Dbxref=GeneID:3795597;Name=insA;Note=SDY1199;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1199
NC_007606.1	RefSeq	CDS	1109483	1109758	.	+	0	ID=cds1054;Parent=gene1177;Dbxref=Genbank:YP_402843.1,GeneID:3795597;Name=YP_402843.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402843.1;transl_table=11
NC_007606.1	RefSeq	gene	1109803	1110180	.	+	.	ID=gene1178;Dbxref=GeneID:3795598;Name=insB;Note=SDY1200;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1200
NC_007606.1	RefSeq	CDS	1109803	1110180	.	+	0	ID=cds1055;Parent=gene1178;Dbxref=Genbank:YP_402844.1,GeneID:3795598;Name=YP_402844.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402844.1;transl_table=11
NC_007606.1	RefSeq	region	1110671	1111436	.	+	.	ID=id197;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1110728	1111000	.	+	.	ID=gene1179;Dbxref=GeneID:18263004;Name=SDY_1200a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1200a
NC_007606.1	RefSeq	CDS	1110728	1111000	.	+	0	ID=cds1056;Parent=gene1179;Dbxref=Genbank:YP_009000691.1,GeneID:18263004;Name=YP_009000691.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000691.1;transl_table=11
NC_007606.1	RefSeq	gene	1111027	1111422	.	+	.	ID=gene1180;Dbxref=GeneID:3795599;Name=SDY_1201;Note=SDY1201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1201
NC_007606.1	RefSeq	CDS	1111027	1111422	.	+	0	ID=cds1057;Parent=gene1180;Dbxref=Genbank:YP_402845.1,GeneID:3795599;Name=YP_402845.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402845.1;transl_table=11
NC_007606.1	RefSeq	gene	1111815	1112834	.	+	.	ID=gene1181;Dbxref=GeneID:3795600;Name=SDY_1202;Note=SDY1202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1202
NC_007606.1	RefSeq	CDS	1111815	1112834	.	+	0	ID=cds1058;Parent=gene1181;Dbxref=Genbank:YP_402846.1,GeneID:3795600;Name=YP_402846.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402846.1;transl_table=11
NC_007606.1	RefSeq	region	1112793	1113560	.	-	.	ID=id198;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1112809	1113204	.	-	.	ID=gene1182;Dbxref=GeneID:3795601;Name=SDY_1203;Note=SDY1203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1203
NC_007606.1	RefSeq	CDS	1112809	1113204	.	-	0	ID=cds1059;Parent=gene1182;Dbxref=Genbank:YP_402847.1,GeneID:3795601;Name=YP_402847.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402847.1;transl_table=11
NC_007606.1	RefSeq	gene	1113231	1113503	.	-	.	ID=gene1183;Dbxref=GeneID:18263005;Name=SDY_1203a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1203a
NC_007606.1	RefSeq	CDS	1113231	1113503	.	-	0	ID=cds1060;Parent=gene1183;Dbxref=Genbank:YP_009000692.1,GeneID:18263005;Name=YP_009000692.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000692.1;transl_table=11
NC_007606.1	RefSeq	gene	1113426	1116020	.	+	.	ID=gene1184;Dbxref=GeneID:3795602;Name=ypjA;Note=SDY1204;gbkey=Gene;gene=ypjA;gene_biotype=protein_coding;locus_tag=SDY_1204
NC_007606.1	RefSeq	CDS	1113426	1116020	.	+	0	ID=cds1061;Parent=gene1184;Dbxref=Genbank:YP_402848.1,GeneID:3795602;Name=YP_402848.1;Note=Code: MU%3B COG: COG3468;gbkey=CDS;gene=ypjA;product=ATPase;protein_id=YP_402848.1;transl_table=11
NC_007606.1	RefSeq	gene	1116391	1116657	.	-	.	ID=gene1185;Dbxref=GeneID:3795603;Name=minE;Note=SDY1205;gbkey=Gene;gene=minE;gene_biotype=protein_coding;locus_tag=SDY_1205
NC_007606.1	RefSeq	CDS	1116391	1116657	.	-	0	ID=cds1062;Parent=gene1185;Dbxref=Genbank:YP_402849.1,GeneID:3795603;Name=YP_402849.1;Note=works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell;gbkey=CDS;gene=minE;product=cell division topological specificity factor MinE;protein_id=YP_402849.1;transl_table=11
NC_007606.1	RefSeq	gene	1116661	1117473	.	-	.	ID=gene1186;Dbxref=GeneID:3795604;Name=minD;Note=SDY1206;gbkey=Gene;gene=minD;gene_biotype=protein_coding;locus_tag=SDY_1206
NC_007606.1	RefSeq	CDS	1116661	1117473	.	-	0	ID=cds1063;Parent=gene1186;Dbxref=Genbank:YP_402850.1,GeneID:3795604;Name=YP_402850.1;Note=ATPase%3B with MinC inhibits cell division by blocking formation of the polar Z ring septums;gbkey=CDS;gene=minD;product=cell division inhibitor MinD;protein_id=YP_402850.1;transl_table=11
NC_007606.1	RefSeq	gene	1117497	1118192	.	-	.	ID=gene1187;Dbxref=GeneID:3795605;Name=minC;Note=SDY1207;gbkey=Gene;gene=minC;gene_biotype=protein_coding;locus_tag=SDY_1207
NC_007606.1	RefSeq	CDS	1117497	1118192	.	-	0	ID=cds1064;Parent=gene1187;Dbxref=Genbank:YP_402851.1,GeneID:3795605;Name=YP_402851.1;Note=blocks the formation of polar Z-ring septums;gbkey=CDS;gene=minC;product=septum formation inhibitor;protein_id=YP_402851.1;transl_table=11
NC_007606.1	RefSeq	region	1118818	1119583	.	-	.	ID=id199;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1118832	1119227	.	-	.	ID=gene1188;Dbxref=GeneID:3795606;Name=SDY_1208;Note=SDY1208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1208
NC_007606.1	RefSeq	CDS	1118832	1119227	.	-	0	ID=cds1065;Parent=gene1188;Dbxref=Genbank:YP_402852.1,GeneID:3795606;Name=YP_402852.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402852.1;transl_table=11
NC_007606.1	RefSeq	gene	1119254	1119526	.	-	.	ID=gene1189;Dbxref=GeneID:18263006;Name=SDY_1208a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1208a
NC_007606.1	RefSeq	CDS	1119254	1119526	.	-	0	ID=cds1066;Parent=gene1189;Dbxref=Genbank:YP_009000693.1,GeneID:18263006;Name=YP_009000693.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000693.1;transl_table=11
NC_007606.1	RefSeq	region	1119584	1119768	.	+	.	ID=id200;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1119754	1120038	.	+	.	ID=gene1190;Dbxref=GeneID:3795607;Name=ycgJ;Note=SDY1209;gbkey=Gene;gene=ycgJ;gene_biotype=protein_coding;locus_tag=SDY_1209
NC_007606.1	RefSeq	CDS	1119754	1120038	.	+	0	ID=cds1067;Parent=gene1190;Dbxref=Genbank:YP_402853.1,GeneID:3795607;Name=YP_402853.1;gbkey=CDS;gene=ycgJ;product=hypothetical protein;protein_id=YP_402853.1;transl_table=11
NC_007606.1	RefSeq	gene	1120158	1120559	.	-	.	ID=gene1191;Dbxref=GeneID:3795608;Name=ycgK;Note=SDY1210;gbkey=Gene;gene=ycgK;gene_biotype=protein_coding;locus_tag=SDY_1210
NC_007606.1	RefSeq	CDS	1120158	1120559	.	-	0	ID=cds1068;Parent=gene1191;Dbxref=Genbank:YP_402854.1,GeneID:3795608;Name=YP_402854.1;gbkey=CDS;gene=ycgK;product=hypothetical protein;protein_id=YP_402854.1;transl_table=11
NC_007606.1	RefSeq	gene	1120766	1121092	.	+	.	ID=gene1192;Dbxref=GeneID:3795609;Name=ycgL;Note=SDY1211;gbkey=Gene;gene=ycgL;gene_biotype=protein_coding;locus_tag=SDY_1211
NC_007606.1	RefSeq	CDS	1120766	1121092	.	+	0	ID=cds1069;Parent=gene1192;Dbxref=Genbank:YP_402855.1,GeneID:3795609;Name=YP_402855.1;Note=Code: S%3B COG: COG3100;gbkey=CDS;gene=ycgL;product=hypothetical protein;protein_id=YP_402855.1;transl_table=11
NC_007606.1	RefSeq	gene	1121164	1121823	.	+	.	ID=gene1193;Dbxref=GeneID:3795610;Name=SDY_1212;Note=SDY1212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1212
NC_007606.1	RefSeq	CDS	1121164	1121823	.	+	0	ID=cds1070;Parent=gene1193;Dbxref=Genbank:YP_402856.1,GeneID:3795610;Name=YP_402856.1;Note=Code: Q%3B COG: COG0179;gbkey=CDS;product=hypothetical protein;protein_id=YP_402856.1;transl_table=11
NC_007606.1	RefSeq	gene	1121915	1122361	.	+	.	ID=gene1194;Dbxref=GeneID:3795611;Name=ycgN;Note=SDY1213;gbkey=Gene;gene=ycgN;gene_biotype=protein_coding;locus_tag=SDY_1213
NC_007606.1	RefSeq	CDS	1121915	1122361	.	+	0	ID=cds1071;Parent=gene1194;Dbxref=Genbank:YP_402857.2,GeneID:3795611;Name=YP_402857.2;Note=Code: S%3B COG: COG2983;gbkey=CDS;gene=ycgN;product=hypothetical protein;protein_id=YP_402857.2;transl_table=11
NC_007606.1	RefSeq	region	1122388	1123156	.	+	.	ID=id201;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1122444	1122719	.	+	.	ID=gene1195;Dbxref=GeneID:3795612;Name=insA;Note=SDY1214;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1214
NC_007606.1	RefSeq	CDS	1122444	1122719	.	+	0	ID=cds1072;Parent=gene1195;Dbxref=Genbank:YP_402858.1,GeneID:3795612;Name=YP_402858.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402858.1;transl_table=11
NC_007606.1	RefSeq	gene	1122764	1123141	.	+	.	ID=gene1196;Dbxref=GeneID:3795613;Name=insB;Note=SDY1215;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1215
NC_007606.1	RefSeq	CDS	1122764	1123141	.	+	0	ID=cds1073;Parent=gene1196;Dbxref=Genbank:YP_402859.1,GeneID:3795613;Name=YP_402859.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402859.1;transl_table=11
NC_007606.1	RefSeq	region	1123315	1124077	.	+	.	ID=id202;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1123372	1123644	.	+	.	ID=gene1197;Dbxref=GeneID:18263007;Name=SDY_1215a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1215a
NC_007606.1	RefSeq	CDS	1123372	1123644	.	+	0	ID=cds1074;Parent=gene1197;Dbxref=Genbank:YP_009000694.1,GeneID:18263007;Name=YP_009000694.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000694.1;transl_table=11
NC_007606.1	RefSeq	gene	1123671	1124066	.	+	.	ID=gene1198;Dbxref=GeneID:3795614;Name=SDY_1216;Note=SDY1216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1216
NC_007606.1	RefSeq	CDS	1123671	1124066	.	+	0	ID=cds1075;Parent=gene1198;Dbxref=Genbank:YP_402860.1,GeneID:3795614;Name=YP_402860.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402860.1;transl_table=11
NC_007606.1	RefSeq	region	1124166	1124931	.	+	.	ID=id203;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1124223	1124495	.	+	.	ID=gene1199;Dbxref=GeneID:18263008;Name=SDY_1216a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1216a
NC_007606.1	RefSeq	CDS	1124223	1124495	.	+	0	ID=cds1076;Parent=gene1199;Dbxref=Genbank:YP_009000695.1,GeneID:18263008;Name=YP_009000695.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000695.1;transl_table=11
NC_007606.1	RefSeq	gene	1124522	1124917	.	+	.	ID=gene1200;Dbxref=GeneID:3797183;Name=SDY_1218;Note=SDY1218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1218
NC_007606.1	RefSeq	CDS	1124522	1124917	.	+	0	ID=cds1077;Parent=gene1200;Dbxref=Genbank:YP_402862.1,GeneID:3797183;Name=YP_402862.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402862.1;transl_table=11
NC_007606.1	RefSeq	gene	1124927	1125169	.	-	.	ID=gene1201;Dbxref=GeneID:3797184;Name=hlyE;Note=SDY1219%3B truncated%3B original product: hemolysin E;gbkey=Gene;gene=hlyE;gene_biotype=pseudogene;locus_tag=SDY_1219;pseudo=true
NC_007606.1	RefSeq	gene	1125536	1125955	.	+	.	ID=gene1202;Dbxref=GeneID:3797185;Name=umuD;Note=SDY1220;gbkey=Gene;gene=umuD;gene_biotype=protein_coding;locus_tag=SDY_1220
NC_007606.1	RefSeq	CDS	1125536	1125955	.	+	0	ID=cds1078;Parent=gene1202;Dbxref=Genbank:YP_402863.1,GeneID:3797185;Name=YP_402863.1;Note=binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;gbkey=CDS;gene=umuD;product=DNA polymerase V subunit UmuD;protein_id=YP_402863.1;transl_table=11
NC_007606.1	RefSeq	gene	1125955	1127214	.	+	.	ID=gene1203;Dbxref=GeneID:3797186;Name=umuC;Note=SDY1221;gbkey=Gene;gene=umuC;gene_biotype=protein_coding;locus_tag=SDY_1221
NC_007606.1	RefSeq	CDS	1125955	1127214	.	+	0	ID=cds1079;Parent=gene1203;Dbxref=Genbank:YP_402864.1,GeneID:3797186;Name=YP_402864.1;Note=binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC)%3B involved in translesion polymerization;gbkey=CDS;gene=umuC;product=DNA polymerase V subunit UmuC;protein_id=YP_402864.1;transl_table=11
NC_007606.1	RefSeq	gene	1127260	1127790	.	-	.	ID=gene1204;Dbxref=GeneID:3797187;Name=dsbB;Note=SDY1222;gbkey=Gene;gene=dsbB;gene_biotype=protein_coding;locus_tag=SDY_1222
NC_007606.1	RefSeq	CDS	1127260	1127790	.	-	0	ID=cds1080;Parent=gene1204;Dbxref=Genbank:YP_402865.1,GeneID:3797187;Name=YP_402865.1;Note=disulfide oxidoreductase%3B integral membrane protein%3B required for perioplasmic disulfide bond formation%3B oxidizes DsbA protein;gbkey=CDS;gene=dsbB;product=disulfide bond formation protein B;protein_id=YP_402865.1;transl_table=11
NC_007606.1	RefSeq	gene	1127936	1129477	.	-	.	ID=gene1205;Dbxref=GeneID:3797188;Name=nhaB;Note=SDY1223;gbkey=Gene;gene=nhaB;gene_biotype=protein_coding;locus_tag=SDY_1223
NC_007606.1	RefSeq	CDS	1127936	1129477	.	-	0	ID=cds1081;Parent=gene1205;Dbxref=Genbank:YP_402866.1,GeneID:3797188;Name=YP_402866.1;Note=involved in regulation of intracellular pH under alkaline conditions;gbkey=CDS;gene=nhaB;product=sodium/proton antiporter;protein_id=YP_402866.1;transl_table=11
NC_007606.1	RefSeq	gene	1129699	1130418	.	+	.	ID=gene1206;Dbxref=GeneID:3797189;Name=fadR;Note=SDY1224;gbkey=Gene;gene=fadR;gene_biotype=protein_coding;locus_tag=SDY_1224
NC_007606.1	RefSeq	CDS	1129699	1130418	.	+	0	ID=cds1082;Parent=gene1206;Dbxref=Genbank:YP_402867.1,GeneID:3797189;Name=YP_402867.1;Note=Multifunctional regulator of fatty acid metabolism;gbkey=CDS;gene=fadR;product=fatty acid metabolism regulator;protein_id=YP_402867.1;transl_table=11
NC_007606.1	RefSeq	gene	1130470	1132002	.	-	.	ID=gene1207;Dbxref=GeneID:3797190;Name=ycgB;Note=SDY1225;gbkey=Gene;gene=ycgB;gene_biotype=protein_coding;locus_tag=SDY_1225
NC_007606.1	RefSeq	CDS	1130470	1132002	.	-	0	ID=cds1083;Parent=gene1207;Dbxref=Genbank:YP_402868.1,GeneID:3797190;Name=YP_402868.1;Note=Code: S%3B COG: COG2719;gbkey=CDS;gene=ycgB;product=SpoVR family protein;protein_id=YP_402868.1;transl_table=11
NC_007606.1	RefSeq	gene	1132332	1133630	.	+	.	ID=gene1208;Dbxref=GeneID:3797191;Name=dadA;Note=SDY1226;gbkey=Gene;gene=dadA;gene_biotype=protein_coding;locus_tag=SDY_1226
NC_007606.1	RefSeq	CDS	1132332	1133630	.	+	0	ID=cds1084;Parent=gene1208;Dbxref=Genbank:YP_402869.1,GeneID:3797191;Name=YP_402869.1;Note=catalyzes the oxidative deamination of D-amino acids;gbkey=CDS;gene=dadA;product=D-amino acid dehydrogenase small subunit;protein_id=YP_402869.1;transl_table=11
NC_007606.1	RefSeq	gene	1133640	1134708	.	+	.	ID=gene1209;Dbxref=GeneID:3797192;Name=dadX;Note=''SDY1227%3B frameshift%3B original product: alanine racemase 2%2C catabolic'';gbkey=Gene;gene=dadX;gene_biotype=pseudogene;locus_tag=SDY_1227;pseudo=true
NC_007606.1	RefSeq	gene	1134877	1136312	.	-	.	ID=gene1210;Dbxref=GeneID:3797193;Name=SDY_1228;Note=SDY1228;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1228;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1136962	1138698	.	-	.	ID=gene1211;Dbxref=GeneID:3797195;Name=cvrA;Note=SDY1230;gbkey=Gene;gene=cvrA;gene_biotype=protein_coding;gene_synonym=cvrA,nhaP2,ycgO;locus_tag=SDY_1230
NC_007606.1	RefSeq	CDS	1136962	1138698	.	-	0	ID=cds1085;Parent=gene1211;Dbxref=Genbank:YP_402872.2,GeneID:3797195;Name=YP_402872.2;Note=the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter%3B can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli;gbkey=CDS;gene=cvrA;product=potassium/proton antiporter;protein_id=YP_402872.2;transl_table=11
NC_007606.1	RefSeq	gene	1138793	1139707	.	-	.	ID=gene1212;Dbxref=GeneID:3797197;Name=ldcA;Note=SDY1232;gbkey=Gene;gene=ldcA;gene_biotype=protein_coding;locus_tag=SDY_1232
NC_007606.1	RefSeq	CDS	1138793	1139707	.	-	0	ID=cds1086;Parent=gene1212;Dbxref=Genbank:YP_402873.1,GeneID:3797197;Name=YP_402873.1;Note=catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine;gbkey=CDS;gene=ldcA;product=L%2CD-carboxypeptidase A;protein_id=YP_402873.1;transl_table=11
NC_007606.1	RefSeq	gene	1139693	1140418	.	+	.	ID=gene1213;Dbxref=GeneID:3797196;Name=mltE;Note=SDY1231;gbkey=Gene;gene=mltE;gene_biotype=protein_coding;locus_tag=SDY_1231
NC_007606.1	RefSeq	CDS	1139693	1140418	.	+	0	ID=cds1087;Parent=gene1213;Dbxref=Genbank:YP_402874.1,GeneID:3797196;Name=YP_402874.1;Note=Code: M%3B COG: COG0741;gbkey=CDS;gene=mltE;product=murein transglycosylase E;protein_id=YP_402874.1;transl_table=11
NC_007606.1	RefSeq	gene	1140420	1141154	.	-	.	ID=gene1214;Dbxref=GeneID:3797198;Name=ycgR;Note=SDY1233;gbkey=Gene;gene=ycgR;gene_biotype=protein_coding;locus_tag=SDY_1233
NC_007606.1	RefSeq	CDS	1140420	1141154	.	-	0	ID=cds1088;Parent=gene1214;Dbxref=Genbank:YP_402875.1,GeneID:3797198;Name=YP_402875.1;Note=Code: M%3B COG: COG5581;gbkey=CDS;gene=ycgR;product=hypothetical protein;protein_id=YP_402875.1;transl_table=11
NC_007606.1	RefSeq	gene	1141355	1141609	.	+	.	ID=gene1215;Dbxref=GeneID:3797199;Name=ymgE;Note=SDY1234;gbkey=Gene;gene=ymgE;gene_biotype=protein_coding;locus_tag=SDY_1234
NC_007606.1	RefSeq	CDS	1141355	1141609	.	+	0	ID=cds1089;Parent=gene1215;Dbxref=Genbank:YP_402876.1,GeneID:3797199;Name=YP_402876.1;Note=Code: S%3B COG: COG2261;gbkey=CDS;gene=ymgE;product=hypothetical protein;protein_id=YP_402876.1;transl_table=11
NC_007606.1	RefSeq	gene	1141659	1143629	.	-	.	ID=gene1216;Dbxref=GeneID:3797200;Name=prrA;Note=SDY1235;gbkey=Gene;gene=prrA;gene_biotype=protein_coding;locus_tag=SDY_1235
NC_007606.1	RefSeq	CDS	1141659	1143629	.	-	0	ID=cds1090;Parent=gene1216;Dbxref=Genbank:YP_402877.1,GeneID:3797200;Name=YP_402877.1;Note=Code: P%3B COG: COG1629;gbkey=CDS;gene=prrA;product=outer membrane receptor;protein_id=YP_402877.1;transl_table=11
NC_007606.1	RefSeq	gene	1143655	1144509	.	-	.	ID=gene1217;Dbxref=GeneID:3797201;Name=modD;Note=SDY1236;gbkey=Gene;gene=modD;gene_biotype=protein_coding;locus_tag=SDY_1236
NC_007606.1	RefSeq	CDS	1143655	1144509	.	-	0	ID=cds1091;Parent=gene1217;Dbxref=Genbank:YP_402878.1,GeneID:3797201;Name=YP_402878.1;Note=involved in molybdenum transport;gbkey=CDS;gene=modD;product=molybdenum transport protein ModD;protein_id=YP_402878.1;transl_table=11
NC_007606.1	RefSeq	region	1144953	1145718	.	+	.	ID=id204;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1145010	1145282	.	+	.	ID=gene1218;Dbxref=GeneID:18263009;Name=SDY_1238a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1238a
NC_007606.1	RefSeq	CDS	1145010	1145282	.	+	0	ID=cds1092;Parent=gene1218;Dbxref=Genbank:YP_009000696.1,GeneID:18263009;Name=YP_009000696.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000696.1;transl_table=11
NC_007606.1	RefSeq	gene	1145309	1145704	.	+	.	ID=gene1219;Dbxref=GeneID:3798350;Name=SDY_1238;Note=SDY1238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1238
NC_007606.1	RefSeq	CDS	1145309	1145704	.	+	0	ID=cds1093;Parent=gene1219;Dbxref=Genbank:YP_402880.1,GeneID:3798350;Name=YP_402880.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402880.1;transl_table=11
NC_007606.1	RefSeq	gene	1145679	1146092	.	-	.	ID=gene1220;Dbxref=GeneID:3798351;Name=SDY_1239;Note=SDY1239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1239
NC_007606.1	RefSeq	CDS	1145679	1146092	.	-	0	ID=cds1094;Parent=gene1220;Dbxref=Genbank:YP_402881.1,GeneID:3798351;Name=YP_402881.1;Note=Code: QR%3B COG: COG0500;gbkey=CDS;product=hypothetical protein;protein_id=YP_402881.1;transl_table=11
NC_007606.1	RefSeq	gene	1146102	1146860	.	-	.	ID=gene1221;Dbxref=GeneID:3798352;Name=SDY_1240;Note=SDY1240;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1240
NC_007606.1	RefSeq	CDS	1146102	1146860	.	-	0	ID=cds1095;Parent=gene1221;Dbxref=Genbank:YP_402882.1,GeneID:3798352;Name=YP_402882.1;Note=Code: PH%3B COG: COG1120;gbkey=CDS;product=iron compound ABC transporter ATP-binding protein;protein_id=YP_402882.1;transl_table=11
NC_007606.1	RefSeq	gene	1146857	1147837	.	-	.	ID=gene1222;Dbxref=GeneID:3798353;Name=SDY_1241;Note=SDY1241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1241
NC_007606.1	RefSeq	CDS	1146857	1147837	.	-	0	ID=cds1096;Parent=gene1222;Dbxref=Genbank:YP_402883.1,GeneID:3798353;Name=YP_402883.1;Note=Code: P%3B COG: COG0609;gbkey=CDS;product=iron compound ABC transporter permease;protein_id=YP_402883.1;transl_table=11
NC_007606.1	RefSeq	gene	1147837	1148859	.	-	.	ID=gene1223;Dbxref=GeneID:3798354;Name=SDY_1242;Note=SDY1242;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1242;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1149095	1149862	.	-	.	ID=id205;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1149109	1149324	.	-	.	ID=gene1224;Dbxref=GeneID:3798356;Name=SDY_1244;Note=SDY1244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1244
NC_007606.1	RefSeq	CDS	1149109	1149324	.	-	0	ID=cds1097;Parent=gene1224;Dbxref=Genbank:YP_402886.1,GeneID:3798356;Name=YP_402886.1;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402886.1;transl_table=11
NC_007606.1	RefSeq	gene	1149533	1149805	.	-	.	ID=gene1225;Dbxref=GeneID:18263010;Name=SDY_1244a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1244a
NC_007606.1	RefSeq	CDS	1149533	1149805	.	-	0	ID=cds1098;Parent=gene1225;Dbxref=Genbank:YP_009000697.1,GeneID:18263010;Name=YP_009000697.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000697.1;transl_table=11
NC_007606.1	RefSeq	gene	1149966	1151663	.	-	.	ID=gene1226;Dbxref=GeneID:3798358;Name=treA;Note=SDY1246;gbkey=Gene;gene=treA;gene_biotype=protein_coding;locus_tag=SDY_1246
NC_007606.1	RefSeq	CDS	1149966	1151663	.	-	0	ID=cds1099;Parent=gene1226;Dbxref=Genbank:YP_402887.1,GeneID:3798358;Name=YP_402887.1;Note=periplasmic%3B catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell;gbkey=CDS;gene=treA;product=trehalase;protein_id=YP_402887.1;transl_table=11
NC_007606.1	RefSeq	gene	1151983	1153405	.	-	.	ID=gene1227;Dbxref=GeneID:3798359;Name=ycgC;Note=SDY1247%3B frameshift%3B original product:  PTS system enzyme I;gbkey=Gene;gene=ycgC;gene_biotype=pseudogene;locus_tag=SDY_1247;pseudo=true
NC_007606.1	RefSeq	gene	1153413	1153748	.	-	.	ID=gene1228;Dbxref=GeneID:3798360;Name=SDY_1248;Note=SDY1248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1248
NC_007606.1	RefSeq	CDS	1153413	1153748	.	-	0	ID=cds1100;Parent=gene1228;Dbxref=Genbank:YP_402889.1,GeneID:3798360;Name=YP_402889.1;Note=Code: G%3B COG: COG2376;gbkey=CDS;product=dihydroxyacetone kinase;protein_id=YP_402889.1;transl_table=11
NC_007606.1	RefSeq	gene	1153779	1154210	.	+	.	ID=gene1229;Dbxref=GeneID:3798361;Name=SDY_1249;Note=SDY1249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1249
NC_007606.1	RefSeq	CDS	1153779	1154210	.	+	0	ID=cds1101;Parent=gene1229;Dbxref=Genbank:YP_402890.1,GeneID:3798361;Name=YP_402890.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402890.1;transl_table=11
NC_007606.1	RefSeq	gene	1154310	1157194	.	-	.	ID=gene1230;Dbxref=GeneID:3798362;Name=SDY_1250;Note=SDY1250%3B frameshift%3B original product:  adhesion and penetration protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1250;pseudo=true
NC_007606.1	RefSeq	region	1157830	1158595	.	-	.	ID=id206;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1157844	1158239	.	-	.	ID=gene1231;Dbxref=GeneID:3798363;Name=SDY_1251;Note=SDY1251;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1251
NC_007606.1	RefSeq	CDS	1157844	1158239	.	-	0	ID=cds1102;Parent=gene1231;Dbxref=Genbank:YP_402891.1,GeneID:3798363;Name=YP_402891.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402891.1;transl_table=11
NC_007606.1	RefSeq	gene	1158266	1158538	.	-	.	ID=gene1232;Dbxref=GeneID:18263011;Name=SDY_1251a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1251a
NC_007606.1	RefSeq	CDS	1158266	1158538	.	-	0	ID=cds1103;Parent=gene1232;Dbxref=Genbank:YP_009000698.1,GeneID:18263011;Name=YP_009000698.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000698.1;transl_table=11
NC_007606.1	RefSeq	gene	1158812	1159903	.	-	.	ID=gene1233;Dbxref=GeneID:3798364;Name=ychF;Note=SDY1252;gbkey=Gene;gene=ychF;gene_biotype=protein_coding;locus_tag=SDY_1252
NC_007606.1	RefSeq	CDS	1158812	1159903	.	-	0	ID=cds1104;Parent=gene1233;Dbxref=Genbank:YP_402892.1,GeneID:3798364;Name=YP_402892.1;Note=translation-associated GTPase%3B the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3)%3B fluorescence spectroscopy revealed nucleic acid binding%3B the yeast protein YBR025c interacts with the translation elongation factor eEF1;gbkey=CDS;gene=ychF;product=GTP-dependent nucleic acid-binding protein EngD;protein_id=YP_402892.1;transl_table=11
NC_007606.1	RefSeq	gene	1160020	1160604	.	-	.	ID=gene1234;Dbxref=GeneID:3798365;Name=pth;Note=SDY1253;gbkey=Gene;gene=pth;gene_biotype=protein_coding;locus_tag=SDY_1253
NC_007606.1	RefSeq	CDS	1160020	1160604	.	-	0	ID=cds1105;Parent=gene1234;Dbxref=Genbank:YP_402893.1,GeneID:3798365;Name=YP_402893.1;Note=Enables the recycling of peptidyl-tRNAs produced at termination of translation;gbkey=CDS;gene=pth;product=peptidyl-tRNA hydrolase;protein_id=YP_402893.1;transl_table=11
NC_007606.1	RefSeq	gene	1160882	1161160	.	+	.	ID=gene1235;Dbxref=GeneID:3798366;Name=ychH;Note=SDY1254;gbkey=Gene;gene=ychH;gene_biotype=protein_coding;locus_tag=SDY_1254
NC_007606.1	RefSeq	CDS	1160882	1161160	.	+	0	ID=cds1106;Parent=gene1235;Dbxref=Genbank:YP_402894.1,GeneID:3798366;Name=YP_402894.1;Note=''YchH%3B transcription activated by CRP (cyclic AMP receptor protein)%2C a global transcription factor involved in regulation of metabolism in enteric bacteria%3B ychH presents a class II promoter to bind CRP%3B unknown function'';gbkey=CDS;gene=ychH;product=hypothetical protein;protein_id=YP_402894.1;transl_table=11
NC_007606.1	RefSeq	gene	1161215	1162867	.	-	.	ID=gene1236;Dbxref=GeneID:3798367;Name=ychM;Note=SDY1255;gbkey=Gene;gene=ychM;gene_biotype=protein_coding;locus_tag=SDY_1255
NC_007606.1	RefSeq	CDS	1161215	1162867	.	-	0	ID=cds1107;Parent=gene1236;Dbxref=Genbank:YP_402895.1,GeneID:3798367;Name=YP_402895.1;Note=role in sulfate transport across the inner membrane%3B member of the SulP family of sulfate transporters%3B seems to mediate transport via sulfate/proton symport;gbkey=CDS;gene=ychM;product=sulfate transporter YchM;protein_id=YP_402895.1;transl_table=11
NC_007606.1	RefSeq	gene	1163019	1163966	.	-	.	ID=gene1237;Dbxref=GeneID:3798368;Name=prsA;Note=SDY1256;gbkey=Gene;gene=prsA;gene_biotype=protein_coding;locus_tag=SDY_1256
NC_007606.1	RefSeq	CDS	1163019	1163966	.	-	0	ID=cds1108;Parent=gene1237;Dbxref=Genbank:YP_402896.1,GeneID:3798368;Name=YP_402896.1;Note=catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP;gbkey=CDS;gene=prsA;product=ribose-phosphate pyrophosphokinase;protein_id=YP_402896.1;transl_table=11
NC_007606.1	RefSeq	gene	1164117	1164968	.	-	.	ID=gene1238;Dbxref=GeneID:3798783;Name=ipk;Note=SDY1257;gbkey=Gene;gene=ipk;gene_biotype=protein_coding;locus_tag=SDY_1257
NC_007606.1	RefSeq	CDS	1164117	1164968	.	-	0	ID=cds1109;Parent=gene1238;Dbxref=Genbank:YP_402897.1,GeneID:3798783;Name=YP_402897.1;Note=An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis;gbkey=CDS;gene=ipk;product=4-diphosphocytidyl-2-C-methyl-D-erythritol kinase;protein_id=YP_402897.1;transl_table=11
NC_007606.1	RefSeq	gene	1164968	1165591	.	-	.	ID=gene1239;Dbxref=GeneID:3798784;Name=lolB;Note=SDY1258;gbkey=Gene;gene=lolB;gene_biotype=protein_coding;locus_tag=SDY_1258
NC_007606.1	RefSeq	CDS	1164968	1165591	.	-	0	ID=cds1110;Parent=gene1239;Dbxref=Genbank:YP_402898.1,GeneID:3798784;Name=YP_402898.1;Note=Incorporates lipoproteins in the outer membrane after they are released by the LolA protein;gbkey=CDS;gene=lolB;product=molecular chaperone LolB;protein_id=YP_402898.1;transl_table=11
NC_007606.1	RefSeq	gene	1165805	1167061	.	+	.	ID=gene1240;Dbxref=GeneID:3798785;Name=hemA;Note=SDY1259;gbkey=Gene;gene=hemA;gene_biotype=protein_coding;locus_tag=SDY_1259
NC_007606.1	RefSeq	CDS	1165805	1167061	.	+	0	ID=cds1111;Parent=gene1240;Dbxref=Genbank:YP_402899.1,GeneID:3798785;Name=YP_402899.1;Note=catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH%3B the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid%3B functions in porphyrin (tetrapyrroles) biosynthesis%3B the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins;gbkey=CDS;gene=hemA;product=glutamyl-tRNA reductase;protein_id=YP_402899.1;transl_table=11
NC_007606.1	RefSeq	gene	1167103	1168185	.	+	.	ID=gene1241;Dbxref=GeneID:3798786;Name=prfA;Note=SDY1260;gbkey=Gene;gene=prfA;gene_biotype=protein_coding;locus_tag=SDY_1260
NC_007606.1	RefSeq	CDS	1167103	1168185	.	+	0	ID=cds1112;Parent=gene1241;Dbxref=Genbank:YP_402900.1,GeneID:3798786;Name=YP_402900.1;Note=recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1%3B this protein is similar to release factor 2;gbkey=CDS;gene=prfA;product=peptide chain release factor 1;protein_id=YP_402900.1;transl_table=11
NC_007606.1	RefSeq	gene	1168185	1169018	.	+	.	ID=gene1242;Dbxref=GeneID:3798787;Name=hemK;Note=SDY1261;gbkey=Gene;gene=hemK;gene_biotype=protein_coding;locus_tag=SDY_1261
NC_007606.1	RefSeq	CDS	1168185	1169018	.	+	0	ID=cds1113;Parent=gene1242;Dbxref=Genbank:YP_402901.1,GeneID:3798787;Name=YP_402901.1;Note=HemK%3B PrmC%3B transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB;gbkey=CDS;gene=hemK;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_402901.1;transl_table=11
NC_007606.1	RefSeq	gene	1169015	1169407	.	+	.	ID=gene1243;Dbxref=GeneID:3798788;Name=SDY_1262;Note=SDY1262;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1262
NC_007606.1	RefSeq	CDS	1169015	1169407	.	+	0	ID=cds1114;Parent=gene1243;Dbxref=Genbank:YP_402902.1,GeneID:3798788;Name=YP_402902.1;Note=Code: S%3B COG: COG3094;gbkey=CDS;product=transcriptional regulator;protein_id=YP_402902.1;transl_table=11
NC_007606.1	RefSeq	gene	1169411	1170220	.	+	.	ID=gene1244;Dbxref=GeneID:3798789;Name=ychA;Note=SDY1263;gbkey=Gene;gene=ychA;gene_biotype=protein_coding;locus_tag=SDY_1263
NC_007606.1	RefSeq	CDS	1169411	1170220	.	+	0	ID=cds1115;Parent=gene1244;Dbxref=Genbank:YP_402903.1,GeneID:3798789;Name=YP_402903.1;Note=Code: S%3B COG: COG2912;gbkey=CDS;gene=ychA;product=transcriptional regulator;protein_id=YP_402903.1;transl_table=11
NC_007606.1	RefSeq	gene	1170256	1171110	.	+	.	ID=gene1245;Dbxref=GeneID:3798790;Name=kdsA;Note=SDY1264;gbkey=Gene;gene=kdsA;gene_biotype=protein_coding;locus_tag=SDY_1264
NC_007606.1	RefSeq	CDS	1170256	1171110	.	+	0	ID=cds1116;Parent=gene1245;Dbxref=Genbank:YP_402904.1,GeneID:3798790;Name=YP_402904.1;Note=catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis;gbkey=CDS;gene=kdsA;product=2-dehydro-3-deoxyphosphooctonate aldolase;protein_id=YP_402904.1;transl_table=11
NC_007606.1	RefSeq	gene	1171258	1171392	.	-	.	ID=gene1246;Dbxref=GeneID:3798791;Name=SDY_1265;Note=SDY1265;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1265
NC_007606.1	RefSeq	CDS	1171258	1171392	.	-	0	ID=cds1117;Parent=gene1246;Dbxref=Genbank:YP_402905.1,GeneID:3798791;Name=YP_402905.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402905.1;transl_table=11
NC_007606.1	RefSeq	gene	1171770	1172870	.	-	.	ID=gene1247;Dbxref=GeneID:3798792;Name=chaA;Note=SDY1266;gbkey=Gene;gene=chaA;gene_biotype=protein_coding;locus_tag=SDY_1266
NC_007606.1	RefSeq	CDS	1171770	1172870	.	-	0	ID=cds1118;Parent=gene1247;Dbxref=Genbank:YP_402906.1,GeneID:3798792;Name=YP_402906.1;Note=Code: P%3B COG: COG0387;gbkey=CDS;gene=chaA;product=calcium/sodium:proton antiporter;protein_id=YP_402906.1;transl_table=11
NC_007606.1	RefSeq	region	1173085	1173852	.	+	.	ID=id207;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1173140	1173415	.	+	.	ID=gene1248;Dbxref=GeneID:3798793;Name=insA;Note=SDY1267;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1267
NC_007606.1	RefSeq	CDS	1173140	1173415	.	+	0	ID=cds1119;Parent=gene1248;Dbxref=Genbank:YP_402907.1,GeneID:3798793;Name=YP_402907.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402907.1;transl_table=11
NC_007606.1	RefSeq	gene	1173917	1174147	.	+	.	ID=gene1249;Dbxref=GeneID:3798795;Name=chaB;Note=SDY1269;gbkey=Gene;gene=chaB;gene_biotype=protein_coding;locus_tag=SDY_1269
NC_007606.1	RefSeq	CDS	1173917	1174147	.	+	0	ID=cds1120;Parent=gene1249;Dbxref=Genbank:YP_402909.1,GeneID:3798795;Name=YP_402909.1;Note=in Escherichia coli this protein ly regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA%3B has weak affinity for calcium and magnesium ions;gbkey=CDS;gene=chaB;product=cation transport regulator;protein_id=YP_402909.1;transl_table=11
NC_007606.1	RefSeq	gene	1174284	1174940	.	+	.	ID=gene1250;Dbxref=GeneID:3798796;Name=chaC;Note=SDY1270;gbkey=Gene;gene=chaC;gene_biotype=protein_coding;locus_tag=SDY_1270
NC_007606.1	RefSeq	CDS	1174284	1174940	.	+	0	ID=cds1121;Parent=gene1250;Dbxref=Genbank:YP_402910.1,GeneID:3798796;Name=YP_402910.1;Note=Code: P%3B COG: COG3703;gbkey=CDS;gene=chaC;product=cation transport regulator;protein_id=YP_402910.1;transl_table=11
NC_007606.1	RefSeq	gene	1175044	1175397	.	-	.	ID=gene1251;Dbxref=GeneID:3798797;Name=ychN;Note=SDY1271;gbkey=Gene;gene=ychN;gene_biotype=protein_coding;locus_tag=SDY_1271
NC_007606.1	RefSeq	CDS	1175044	1175397	.	-	0	ID=cds1122;Parent=gene1251;Dbxref=Genbank:YP_402911.1,GeneID:3798797;Name=YP_402911.1;Note=Code: P%3B COG: COG1553;gbkey=CDS;gene=ychN;product=hypothetical protein;protein_id=YP_402911.1;transl_table=11
NC_007606.1	RefSeq	region	1175772	1176537	.	+	.	ID=id208;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1175829	1176101	.	+	.	ID=gene1252;Dbxref=GeneID:18263012;Name=SDY_1273a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1273a
NC_007606.1	RefSeq	CDS	1175829	1176101	.	+	0	ID=cds1123;Parent=gene1252;Dbxref=Genbank:YP_009000699.1,GeneID:18263012;Name=YP_009000699.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000699.1;transl_table=11
NC_007606.1	RefSeq	gene	1176128	1176523	.	+	.	ID=gene1253;Dbxref=GeneID:3798799;Name=SDY_1273;Note=SDY1273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1273
NC_007606.1	RefSeq	CDS	1176128	1176523	.	+	0	ID=cds1124;Parent=gene1253;Dbxref=Genbank:YP_402913.1,GeneID:3798799;Name=YP_402913.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402913.1;transl_table=11
NC_007606.1	RefSeq	gene	1176501	1177737	.	+	.	ID=gene1254;Dbxref=GeneID:3798800;Name=ychP;Note=SDY1274%3B frameshift%3B original product:  invasin;gbkey=Gene;gene=ychP;gene_biotype=pseudogene;locus_tag=SDY_1274;pseudo=true
NC_007606.1	RefSeq	gene	1177738	1178388	.	-	.	ID=gene1255;Dbxref=GeneID:3798801;Name=narL;Note=SDY1275;gbkey=Gene;gene=narL;gene_biotype=protein_coding;locus_tag=SDY_1275
NC_007606.1	RefSeq	CDS	1177738	1178388	.	-	0	ID=cds1125;Parent=gene1255;Dbxref=Genbank:YP_402914.1,GeneID:3798801;Name=YP_402914.1;Note=two-component response regulator NarL%3B phosphorylated by NarQ%3B activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase;gbkey=CDS;gene=narL;product=transcriptional regulator NarL;protein_id=YP_402914.1;transl_table=11
NC_007606.1	RefSeq	gene	1178381	1180177	.	-	.	ID=gene1256;Dbxref=GeneID:3796785;Name=narX;Note=SDY1276;gbkey=Gene;gene=narX;gene_biotype=protein_coding;locus_tag=SDY_1276
NC_007606.1	RefSeq	CDS	1178381	1180177	.	-	0	ID=cds1126;Parent=gene1256;Dbxref=Genbank:YP_402915.1,GeneID:3796785;Name=YP_402915.1;Note=Code: T%3B COG: COG3850;gbkey=CDS;gene=narX;product=nitrate/nitrite sensor protein NarX;protein_id=YP_402915.1;transl_table=11
NC_007606.1	RefSeq	gene	1180516	1181907	.	+	.	ID=gene1257;Dbxref=GeneID:3796787;Name=narK;Note=SDY1278;gbkey=Gene;gene=narK;gene_biotype=protein_coding;locus_tag=SDY_1278
NC_007606.1	RefSeq	CDS	1180516	1181907	.	+	0	ID=cds1127;Parent=gene1257;Dbxref=Genbank:YP_402917.1,GeneID:3796787;Name=YP_402917.1;Note=Code: P%3B COG: COG2223;gbkey=CDS;gene=narK;product=nitrite extrusion protein;protein_id=YP_402917.1;transl_table=11
NC_007606.1	RefSeq	gene	1182300	1186043	.	+	.	ID=gene1258;Dbxref=GeneID:3796788;Name=narG;Note=SDY1279;gbkey=Gene;gene=narG;gene_biotype=protein_coding;locus_tag=SDY_1279
NC_007606.1	RefSeq	CDS	1182300	1186043	.	+	0	ID=cds1128;Parent=gene1258;Dbxref=Genbank:YP_402918.1,GeneID:3796788;Name=YP_402918.1;Note=Code: C%3B COG: COG5013;gbkey=CDS;gene=narG;product=nitrate reductase 1 subunit alpha;protein_id=YP_402918.1;transl_table=11
NC_007606.1	RefSeq	gene	1186040	1187578	.	+	.	ID=gene1259;Dbxref=GeneID:3796789;Name=narH;Note=SDY1280;gbkey=Gene;gene=narH;gene_biotype=protein_coding;locus_tag=SDY_1280
NC_007606.1	RefSeq	CDS	1186040	1187578	.	+	0	ID=cds1129;Parent=gene1259;Dbxref=Genbank:YP_402919.1,GeneID:3796789;Name=YP_402919.1;Note=Code: C%3B COG: COG1140;gbkey=CDS;gene=narH;product=nitrate reductase 1 subunit beta;protein_id=YP_402919.1;transl_table=11
NC_007606.1	RefSeq	gene	1187575	1188285	.	+	.	ID=gene1260;Dbxref=GeneID:3796790;Name=narJ;Note=SDY1281;gbkey=Gene;gene=narJ;gene_biotype=protein_coding;locus_tag=SDY_1281
NC_007606.1	RefSeq	CDS	1187575	1188285	.	+	0	ID=cds1130;Parent=gene1260;Dbxref=Genbank:YP_402920.1,GeneID:3796790;Name=YP_402920.1;Note=Code: C%3B COG: COG2180;gbkey=CDS;gene=narJ;product=nitrate reductase 1 subunit delta;protein_id=YP_402920.1;transl_table=11
NC_007606.1	RefSeq	gene	1188285	1188962	.	+	.	ID=gene1261;Dbxref=GeneID:3796791;Name=narI;Note=SDY1282;gbkey=Gene;gene=narI;gene_biotype=protein_coding;locus_tag=SDY_1282
NC_007606.1	RefSeq	CDS	1188285	1188962	.	+	0	ID=cds1131;Parent=gene1261;Dbxref=Genbank:YP_402921.1,GeneID:3796791;Name=YP_402921.1;Note=Code: C%3B COG: COG2181;gbkey=CDS;gene=narI;product=nitrate reductase 1 cytochrome b(NR) subunit gamma;protein_id=YP_402921.1;transl_table=11
NC_007606.1	RefSeq	gene	1189324	1189408	.	-	.	ID=gene1262;Dbxref=GeneID:3796792;Name=SDY_1283;Note=SDY1283;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1283
NC_007606.1	RefSeq	tRNA	1189324	1189408	.	-	.	ID=rna30;Parent=gene1262;Dbxref=GeneID:3796792;codons=9;gbkey=tRNA;product=tRNA-Tyr
NC_007606.1	RefSeq	exon	1189324	1189408	.	-	.	ID=id209;Parent=rna30;Dbxref=GeneID:3796792;codons=9;gbkey=tRNA;product=tRNA-Tyr
NC_007606.1	RefSeq	gene	1189567	1190409	.	-	.	ID=gene1263;Dbxref=GeneID:3796793;Name=purU;Note=SDY1284;gbkey=Gene;gene=purU;gene_biotype=protein_coding;locus_tag=SDY_1284
NC_007606.1	RefSeq	CDS	1189567	1190409	.	-	0	ID=cds1132;Parent=gene1263;Dbxref=Genbank:YP_402922.1,GeneID:3796793;Name=YP_402922.1;Note=produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis%3B has a role in one-carbon metabolism%3B forms a homohexamer%3B activated by methionine and inhibited by glycine;gbkey=CDS;gene=purU;product=formyltetrahydrofolate deformylase;protein_id=YP_402922.1;transl_table=11
NC_007606.1	RefSeq	gene	1190459	1190917	.	-	.	ID=gene1264;Dbxref=GeneID:3796794;Name=ychJ;Note=SDY1285;gbkey=Gene;gene=ychJ;gene_biotype=protein_coding;locus_tag=SDY_1285
NC_007606.1	RefSeq	CDS	1190459	1190917	.	-	0	ID=cds1133;Parent=gene1264;Dbxref=Genbank:YP_402923.1,GeneID:3796794;Name=YP_402923.1;Note=Code: S%3B COG: COG3012;gbkey=CDS;gene=ychJ;product=hypothetical protein;protein_id=YP_402923.1;transl_table=11
NC_007606.1	RefSeq	gene	1191030	1191936	.	+	.	ID=gene1265;Dbxref=GeneID:3796795;Name=ychK;Note=SDY1286;gbkey=Gene;gene=ychK;gene_biotype=pseudogene;locus_tag=SDY_1286;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1192028	1193041	.	+	.	ID=gene1266;Dbxref=GeneID:3796796;Name=hnr;Note=SDY1287;gbkey=Gene;gene=hnr;gene_biotype=protein_coding;locus_tag=SDY_1287
NC_007606.1	RefSeq	CDS	1192028	1193041	.	+	0	ID=cds1134;Parent=gene1266;Dbxref=Genbank:YP_402925.1,GeneID:3796796;Name=YP_402925.1;Note=Code: T%3B COG: COG0784;gbkey=CDS;gene=hnr;product=response regulator of RpoS;protein_id=YP_402925.1;transl_table=11
NC_007606.1	RefSeq	gene	1193243	1194151	.	+	.	ID=gene1267;Dbxref=GeneID:3796797;Name=galU;Note=SDY1288;gbkey=Gene;gene=galU;gene_biotype=protein_coding;locus_tag=SDY_1288
NC_007606.1	RefSeq	CDS	1193243	1194151	.	+	0	ID=cds1135;Parent=gene1267;Dbxref=Genbank:YP_402926.1,GeneID:3796797;Name=YP_402926.1;Note=''together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose'';gbkey=CDS;gene=galU;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=YP_402926.1;transl_table=11
NC_007606.1	RefSeq	gene	1194295	1194708	.	-	.	ID=gene1268;Dbxref=GeneID:3796798;Name=hns;Note=SDY1289;gbkey=Gene;gene=hns;gene_biotype=protein_coding;locus_tag=SDY_1289
NC_007606.1	RefSeq	CDS	1194295	1194708	.	-	0	ID=cds1136;Parent=gene1268;Dbxref=Genbank:YP_402927.1,GeneID:3796798;Name=YP_402927.1;Note=Code: R%3B COG: COG2916;gbkey=CDS;gene=hns;product=global DNA-binding transcriptional dual regulator H-NS;protein_id=YP_402927.1;transl_table=11
NC_007606.1	RefSeq	gene	1195312	1195929	.	+	.	ID=gene1269;Dbxref=GeneID:3796799;Name=tdk;Note=SDY1290;gbkey=Gene;gene=tdk;gene_biotype=protein_coding;locus_tag=SDY_1290
NC_007606.1	RefSeq	CDS	1195312	1195929	.	+	0	ID=cds1137;Parent=gene1269;Dbxref=Genbank:YP_402928.1,GeneID:3796799;Name=YP_402928.1;Note=catalyzes the formation of thymidine 5'-phosphate from thymidine;gbkey=CDS;gene=tdk;product=thymidine kinase;protein_id=YP_402928.1;transl_table=11
NC_007606.1	RefSeq	region	1195941	1196706	.	-	.	ID=id210;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1195955	1196350	.	-	.	ID=gene1270;Dbxref=GeneID:3796800;Name=SDY_1291;Note=SDY1291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1291
NC_007606.1	RefSeq	CDS	1195955	1196350	.	-	0	ID=cds1138;Parent=gene1270;Dbxref=Genbank:YP_402929.1,GeneID:3796800;Name=YP_402929.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402929.1;transl_table=11
NC_007606.1	RefSeq	gene	1196377	1196649	.	-	.	ID=gene1271;Dbxref=GeneID:18263013;Name=SDY_1290a;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1290a;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1196974	1198169	.	+	.	ID=id211;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1197041	1198174	.	+	.	ID=gene1272;Dbxref=GeneID:3796801;Name=SDY_1292;Note=SDY1292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1292
NC_007606.1	RefSeq	CDS	1197041	1198174	.	+	0	ID=cds1139;Parent=gene1272;Dbxref=Genbank:YP_402930.1,GeneID:3796801;Name=YP_402930.1;Note=Code: L%3B COG: COG3385;gbkey=CDS;product=insertion sequence element IS4 transposase InsG;protein_id=YP_402930.1;transl_table=11
NC_007606.1	RefSeq	region	1198170	1198937	.	+	.	ID=id212;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1198225	1198500	.	+	.	ID=gene1273;Dbxref=GeneID:3796802;Name=insA;Note=SDY1293;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1293
NC_007606.1	RefSeq	CDS	1198225	1198500	.	+	0	ID=cds1140;Parent=gene1273;Dbxref=Genbank:YP_402931.1,GeneID:3796802;Name=YP_402931.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402931.1;transl_table=11
NC_007606.1	RefSeq	region	1198933	1199165	.	+	.	ID=id213;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1199206	1201881	.	-	.	ID=gene1274;Dbxref=GeneID:3796690;Name=adhE;Note=SDY1295;gbkey=Gene;gene=adhE;gene_biotype=protein_coding;locus_tag=SDY_1295
NC_007606.1	RefSeq	CDS	1199206	1201881	.	-	0	ID=cds1141;Parent=gene1274;Dbxref=Genbank:YP_402933.1,GeneID:3796690;Name=YP_402933.1;Note=Code: C%3B COG: COG1454;gbkey=CDS;gene=adhE;product=bifunctional acetaldehyde-CoA/alcohol dehydrogenase;protein_id=YP_402933.1;transl_table=11
NC_007606.1	RefSeq	region	1202232	1202997	.	+	.	ID=id214;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1202289	1202561	.	+	.	ID=gene1275;Dbxref=GeneID:18263014;Name=SDY_1294a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1294a
NC_007606.1	RefSeq	CDS	1202289	1202561	.	+	0	ID=cds1142;Parent=gene1275;Dbxref=Genbank:YP_009000700.1,GeneID:18263014;Name=YP_009000700.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000700.1;transl_table=11
NC_007606.1	RefSeq	gene	1202588	1202983	.	+	.	ID=gene1276;Dbxref=GeneID:3796691;Name=SDY_1296;Note=SDY1296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1296
NC_007606.1	RefSeq	CDS	1202588	1202983	.	+	0	ID=cds1143;Parent=gene1276;Dbxref=Genbank:YP_402934.1,GeneID:3796691;Name=YP_402934.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_402934.1;transl_table=11
NC_007606.1	RefSeq	region	1203061	1203824	.	+	.	ID=id215;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1203112	1203387	.	+	.	ID=gene1277;Dbxref=GeneID:3796692;Name=insA;Note=SDY1297;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1297
NC_007606.1	RefSeq	CDS	1203112	1203387	.	+	0	ID=cds1144;Parent=gene1277;Dbxref=Genbank:YP_402935.1,GeneID:3796692;Name=YP_402935.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402935.1;transl_table=11
NC_007606.1	RefSeq	gene	1203432	1203809	.	+	.	ID=gene1278;Dbxref=GeneID:3796693;Name=insB;Note=SDY1298;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1298
NC_007606.1	RefSeq	CDS	1203432	1203809	.	+	0	ID=cds1145;Parent=gene1278;Dbxref=Genbank:YP_402936.1,GeneID:3796693;Name=YP_402936.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402936.1;transl_table=11
NC_007606.1	RefSeq	region	1204052	1204817	.	-	.	ID=id216;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1204066	1204461	.	-	.	ID=gene1279;Dbxref=GeneID:3796694;Name=SDY_1299;Note=SDY1299;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1299
NC_007606.1	RefSeq	CDS	1204066	1204461	.	-	0	ID=cds1146;Parent=gene1279;Dbxref=Genbank:YP_402937.1,GeneID:3796694;Name=YP_402937.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_402937.1;transl_table=11
NC_007606.1	RefSeq	gene	1204488	1204760	.	-	.	ID=gene1280;Dbxref=GeneID:18263015;Name=SDY_1301a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1301a
NC_007606.1	RefSeq	CDS	1204488	1204760	.	-	0	ID=cds1147;Parent=gene1280;Dbxref=Genbank:YP_009000701.1,GeneID:18263015;Name=YP_009000701.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000701.1;transl_table=11
NC_007606.1	RefSeq	gene	1205560	1207191	.	+	.	ID=gene1281;Dbxref=GeneID:3796696;Name=oppA;Note=SDY1301;gbkey=Gene;gene=oppA;gene_biotype=protein_coding;locus_tag=SDY_1301
NC_007606.1	RefSeq	CDS	1205560	1207191	.	+	0	ID=cds1148;Parent=gene1281;Dbxref=Genbank:YP_402939.1,GeneID:3796696;Name=YP_402939.1;Note=Code: E%3B COG: COG4166;gbkey=CDS;gene=oppA;product=hypothetical protein;protein_id=YP_402939.1;transl_table=11
NC_007606.1	RefSeq	gene	1207277	1208197	.	+	.	ID=gene1282;Dbxref=GeneID:3796697;Name=oppB;Note=SDY1302;gbkey=Gene;gene=oppB;gene_biotype=protein_coding;locus_tag=SDY_1302
NC_007606.1	RefSeq	CDS	1207277	1208197	.	+	0	ID=cds1149;Parent=gene1282;Dbxref=Genbank:YP_402940.1,GeneID:3796697;Name=YP_402940.1;Note=Code: EP%3B COG: COG0601;gbkey=CDS;gene=oppB;product=oligopeptide transporter permease;protein_id=YP_402940.1;transl_table=11
NC_007606.1	RefSeq	gene	1208212	1209120	.	+	.	ID=gene1283;Dbxref=GeneID:3796698;Name=oppC;Note=SDY1303;gbkey=Gene;gene=oppC;gene_biotype=protein_coding;locus_tag=SDY_1303
NC_007606.1	RefSeq	CDS	1208212	1209120	.	+	0	ID=cds1150;Parent=gene1283;Dbxref=Genbank:YP_402941.1,GeneID:3796698;Name=YP_402941.1;Note=Code: EP%3B COG: COG1173;gbkey=CDS;gene=oppC;product=hypothetical protein;protein_id=YP_402941.1;transl_table=11
NC_007606.1	RefSeq	gene	1209132	1210145	.	+	.	ID=gene1284;Dbxref=GeneID:3796699;Name=oppD;Note=SDY1304;gbkey=Gene;gene=oppD;gene_biotype=protein_coding;locus_tag=SDY_1304
NC_007606.1	RefSeq	CDS	1209132	1210145	.	+	0	ID=cds1151;Parent=gene1284;Dbxref=Genbank:YP_402942.1,GeneID:3796699;Name=YP_402942.1;Note=Code: EP%3B COG: COG0444;gbkey=CDS;gene=oppD;product=oligopeptide ABC transporter ATP-binding protein;protein_id=YP_402942.1;transl_table=11
NC_007606.1	RefSeq	gene	1210142	1211146	.	+	.	ID=gene1285;Dbxref=GeneID:3796700;Name=oppF;Note=SDY1305;gbkey=Gene;gene=oppF;gene_biotype=protein_coding;locus_tag=SDY_1305
NC_007606.1	RefSeq	CDS	1210142	1211146	.	+	0	ID=cds1152;Parent=gene1285;Dbxref=Genbank:YP_402943.1,GeneID:3796700;Name=YP_402943.1;Note=Code: E%3B COG: COG4608;gbkey=CDS;gene=oppF;product=hypothetical protein;protein_id=YP_402943.1;transl_table=11
NC_007606.1	RefSeq	gene	1211199	1211528	.	-	.	ID=gene1286;Dbxref=GeneID:3796701;Name=SDY_1306;Note=SDY1306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1306
NC_007606.1	RefSeq	CDS	1211199	1211528	.	-	0	ID=cds1153;Parent=gene1286;Dbxref=Genbank:YP_402944.2,GeneID:3796701;Name=YP_402944.2;Note=highly acidic protein%3B the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi)%3B binds heat-unstable protein (HU-alpha) which is a histone-like protein;gbkey=CDS;product=dsDNA-mimic protein;protein_id=YP_402944.2;transl_table=11
NC_007606.1	RefSeq	gene	1211563	1213023	.	-	.	ID=gene1287;Dbxref=GeneID:3796702;Name=cls;Note=SDY1307;gbkey=Gene;gene=cls;gene_biotype=protein_coding;locus_tag=SDY_1307
NC_007606.1	RefSeq	CDS	1211563	1213023	.	-	0	ID=cds1154;Parent=gene1287;Dbxref=Genbank:YP_402945.1,GeneID:3796702;Name=YP_402945.1;Note=catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol);gbkey=CDS;gene=cls;product=cardiolipin synthetase;protein_id=YP_402945.1;transl_table=11
NC_007606.1	RefSeq	gene	1213393	1214646	.	-	.	ID=gene1288;Dbxref=GeneID:3796703;Name=kch;Note=SDY1308;gbkey=Gene;gene=kch;gene_biotype=protein_coding;locus_tag=SDY_1308
NC_007606.1	RefSeq	CDS	1213393	1214646	.	-	0	ID=cds1155;Parent=gene1288;Dbxref=Genbank:YP_402946.1,GeneID:3796703;Name=YP_402946.1;Note=Code: P%3B COG: COG1226;gbkey=CDS;gene=kch;product=voltage-gated potassium channel;protein_id=YP_402946.1;transl_table=11
NC_007606.1	RefSeq	gene	1214946	1215242	.	-	.	ID=gene1289;Dbxref=GeneID:3796704;Name=yciI;Note=SDY1309;gbkey=Gene;gene=yciI;gene_biotype=protein_coding;locus_tag=SDY_1309
NC_007606.1	RefSeq	CDS	1214946	1215242	.	-	0	ID=cds1156;Parent=gene1289;Dbxref=Genbank:YP_402947.2,GeneID:3796704;Name=YP_402947.2;Note=''unknown function%3B YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase%2C but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity'';gbkey=CDS;gene=yciI;product=hypothetical protein;protein_id=YP_402947.2;transl_table=11
NC_007606.1	RefSeq	region	1216636	1217965	.	+	.	ID=id217;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1216727	1217092	.	+	.	ID=gene1290;Dbxref=GeneID:3796705;Name=SDY_1310;Note=SDY1310;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1310
NC_007606.1	RefSeq	CDS	1216727	1217092	.	+	0	ID=cds1157;Parent=gene1290;Dbxref=Genbank:YP_402948.1,GeneID:3796705;Name=YP_402948.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_402948.1;transl_table=11
NC_007606.1	RefSeq	gene	1217050	1217928	.	+	.	ID=gene1291;Dbxref=GeneID:3796706;Name=SDY_1311;Note=SDY1311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1311
NC_007606.1	RefSeq	CDS	1217050	1217928	.	+	0	ID=cds1158;Parent=gene1291;Dbxref=Genbank:YP_402949.2,GeneID:3796706;Name=YP_402949.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_402949.2;transl_table=11
NC_007606.1	RefSeq	gene	1218133	1218684	.	+	.	ID=gene1292;Dbxref=GeneID:3796707;Name=SDY_1312;Note=SDY1312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1312
NC_007606.1	RefSeq	CDS	1218133	1218684	.	+	0	ID=cds1159;Parent=gene1292;Dbxref=Genbank:YP_402950.1,GeneID:3796707;Name=YP_402950.1;Note=Code: L%3B COG: COG1961;gbkey=CDS;product=DNA invertase-like protein;protein_id=YP_402950.1;transl_table=11
NC_007606.1	RefSeq	region	1218693	1219944	.	+	.	ID=id218;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1218765	1219067	.	+	.	ID=gene1293;Dbxref=GeneID:3796708;Name=SDY_1313;Note=SDY1313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1313
NC_007606.1	RefSeq	CDS	1218765	1219067	.	+	0	ID=cds1160;Parent=gene1293;Dbxref=Genbank:YP_402951.1,GeneID:3796708;Name=YP_402951.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_402951.1;transl_table=11
NC_007606.1	RefSeq	gene	1220191	1220910	.	+	.	ID=gene1294;Dbxref=GeneID:3798748;Name=tonB;Note=SDY1316;gbkey=Gene;gene=tonB;gene_biotype=protein_coding;locus_tag=SDY_1316
NC_007606.1	RefSeq	CDS	1220191	1220910	.	+	0	ID=cds1161;Parent=gene1294;Dbxref=Genbank:YP_402954.1,GeneID:3798748;Name=YP_402954.1;Note=''membrane spanning protein in TonB-ExbB-ExbD complex%3B transduces proton motive force of the cytoplasmic membrane to outer membrane transporters%3B involved in the transport of ron-siderophore complexes%2C vitamin B12 and colicins'';gbkey=CDS;gene=tonB;product=transporter;protein_id=YP_402954.1;transl_table=11
NC_007606.1	RefSeq	gene	1220950	1221348	.	-	.	ID=gene1295;Dbxref=GeneID:3798749;Name=yciA;Note=SDY1317;gbkey=Gene;gene=yciA;gene_biotype=protein_coding;locus_tag=SDY_1317
NC_007606.1	RefSeq	CDS	1220950	1221348	.	-	0	ID=cds1162;Parent=gene1295;Dbxref=Genbank:YP_402955.1,GeneID:3798749;Name=YP_402955.1;Note=YciA%3B hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA%3B member of the the acyl coenzyme A hydrolase of proteins;gbkey=CDS;gene=yciA;product=acyl-CoA thioester hydrolase;protein_id=YP_402955.1;transl_table=11
NC_007606.1	RefSeq	gene	1221453	1221992	.	-	.	ID=gene1296;Dbxref=GeneID:3798750;Name=yciB;Note=SDY1318;gbkey=Gene;gene=yciB;gene_biotype=protein_coding;locus_tag=SDY_1318
NC_007606.1	RefSeq	CDS	1221453	1221992	.	-	0	ID=cds1163;Parent=gene1296;Dbxref=Genbank:YP_402956.1,GeneID:3798750;Name=YP_402956.1;Note=Involved in cell division%3B probably involved in intracellular septation;gbkey=CDS;gene=yciB;product=intracellular septation protein A;protein_id=YP_402956.1;transl_table=11
NC_007606.1	RefSeq	gene	1222022	1222765	.	-	.	ID=gene1297;Dbxref=GeneID:3798751;Name=yciC;Note=SDY1319;gbkey=Gene;gene=yciC;gene_biotype=protein_coding;locus_tag=SDY_1319
NC_007606.1	RefSeq	CDS	1222022	1222765	.	-	0	ID=cds1164;Parent=gene1297;Dbxref=Genbank:YP_402957.1,GeneID:3798751;Name=YP_402957.1;gbkey=CDS;gene=yciC;product=hypothetical protein;protein_id=YP_402957.1;transl_table=11
NC_007606.1	RefSeq	gene	1223122	1223760	.	+	.	ID=gene1298;Dbxref=GeneID:3798752;Name=yciD;Note=SDY1320;gbkey=Gene;gene=yciD;gene_biotype=protein_coding;locus_tag=SDY_1320
NC_007606.1	RefSeq	CDS	1223122	1223760	.	+	0	ID=cds1165;Parent=gene1298;Dbxref=Genbank:YP_402958.1,GeneID:3798752;Name=YP_402958.1;Note=receptor for colicin S4;gbkey=CDS;gene=yciD;product=outer membrane protein W;protein_id=YP_402958.1;transl_table=11
NC_007606.1	RefSeq	gene	1223820	1224329	.	-	.	ID=gene1299;Dbxref=GeneID:3798753;Name=yciE;Note=SDY1321;gbkey=Gene;gene=yciE;gene_biotype=protein_coding;locus_tag=SDY_1321
NC_007606.1	RefSeq	CDS	1223820	1224329	.	-	0	ID=cds1166;Parent=gene1299;Dbxref=Genbank:YP_402959.1,GeneID:3798753;Name=YP_402959.1;Note=Code: S%3B COG: COG3685;gbkey=CDS;gene=yciE;product=hypothetical protein;protein_id=YP_402959.1;transl_table=11
NC_007606.1	RefSeq	region	1224314	1224558	.	-	.	ID=id219;Note=fragment;gbkey=mobile_element;gene=yciE
NC_007606.1	RefSeq	region	1224559	1225324	.	+	.	ID=id220;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1224614	1224889	.	+	.	ID=gene1300;Dbxref=GeneID:3798755;Name=insA;Note=SDY1323;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1323
NC_007606.1	RefSeq	CDS	1224614	1224889	.	+	0	ID=cds1167;Parent=gene1300;Dbxref=Genbank:YP_402961.1,GeneID:3798755;Name=YP_402961.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402961.1;transl_table=11
NC_007606.1	RefSeq	gene	1224934	1225311	.	+	.	ID=gene1301;Dbxref=GeneID:3798756;Name=insB;Note=SDY1324;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1324
NC_007606.1	RefSeq	CDS	1224934	1225311	.	+	0	ID=cds1168;Parent=gene1301;Dbxref=Genbank:YP_402962.1,GeneID:3798756;Name=YP_402962.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402962.1;transl_table=11
NC_007606.1	RefSeq	region	1225439	1226139	.	+	.	ID=id221;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1225496	1225768	.	+	.	ID=gene1302;Dbxref=GeneID:18263016;Name=SDY_1324a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1324a
NC_007606.1	RefSeq	CDS	1225496	1225768	.	+	0	ID=cds1169;Parent=gene1302;Dbxref=Genbank:YP_009000702.1,GeneID:18263016;Name=YP_009000702.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000702.1;transl_table=11
NC_007606.1	RefSeq	region	1226140	1227403	.	+	.	ID=id222;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1226204	1226506	.	+	.	ID=gene1303;Dbxref=GeneID:3798758;Name=SDY_1326;Note=SDY1326;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1326
NC_007606.1	RefSeq	CDS	1226204	1226506	.	+	0	ID=cds1170;Parent=gene1303;Dbxref=Genbank:YP_402964.1,GeneID:3798758;Name=YP_402964.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402964.1;transl_table=11
NC_007606.1	RefSeq	gene	1226647	1227457	.	+	.	ID=gene1304;Dbxref=GeneID:3798759;Name=SDY_1327;Note=SDY1327;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1327;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1227673	1228479	.	-	.	ID=gene1305;Dbxref=GeneID:3798760;Name=trpA;Note=SDY1328;gbkey=Gene;gene=trpA;gene_biotype=protein_coding;locus_tag=SDY_1328
NC_007606.1	RefSeq	CDS	1227673	1228479	.	-	0	ID=cds1171;Parent=gene1305;Dbxref=Genbank:YP_402966.1,GeneID:3798760;Name=YP_402966.1;Note=catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis;gbkey=CDS;gene=trpA;product=tryptophan synthase subunit alpha;protein_id=YP_402966.1;transl_table=11
NC_007606.1	RefSeq	gene	1228479	1229672	.	-	.	ID=gene1306;Dbxref=GeneID:3798761;Name=trpB;Note=SDY1329;gbkey=Gene;gene=trpB;gene_biotype=protein_coding;locus_tag=SDY_1329
NC_007606.1	RefSeq	CDS	1228479	1229672	.	-	0	ID=cds1172;Parent=gene1306;Dbxref=Genbank:YP_402967.1,GeneID:3798761;Name=YP_402967.1;Note=catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate;gbkey=CDS;gene=trpB;product=tryptophan synthase subunit beta;protein_id=YP_402967.1;transl_table=11
NC_007606.1	RefSeq	gene	1229684	1231045	.	-	.	ID=gene1307;Dbxref=GeneID:3798762;Name=trpC;Note=SDY1330;gbkey=Gene;gene=trpC;gene_biotype=protein_coding;gene_synonym=trpF;locus_tag=SDY_1330
NC_007606.1	RefSeq	CDS	1229684	1231045	.	-	0	ID=cds1173;Parent=gene1307;Dbxref=Genbank:YP_402968.1,GeneID:3798762;Name=YP_402968.1;Note=monomeric bifunctional protein%3B functions in tryptophan biosynthesis pathway%3B phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate;gbkey=CDS;gene=trpC;product=bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase;protein_id=YP_402968.1;transl_table=11
NC_007606.1	RefSeq	gene	1231046	1232641	.	-	.	ID=gene1308;Dbxref=GeneID:3798763;Name=trpD;Note=SDY1331;gbkey=Gene;gene=trpD;gene_biotype=protein_coding;locus_tag=SDY_1331
NC_007606.1	RefSeq	CDS	1231046	1232641	.	-	0	ID=cds1174;Parent=gene1308;Dbxref=Genbank:YP_402969.1,GeneID:3798763;Name=YP_402969.1;Note=bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase%3B TrpD%3B forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine%3B also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate%3B functions in tryptophan biosynthesis;gbkey=CDS;gene=trpD;product=bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase;protein_id=YP_402969.1;transl_table=11
NC_007606.1	RefSeq	gene	1232641	1234203	.	-	.	ID=gene1309;Dbxref=GeneID:3798764;Name=trpE;Note=SDY1332;gbkey=Gene;gene=trpE;gene_biotype=protein_coding;locus_tag=SDY_1332
NC_007606.1	RefSeq	CDS	1232641	1234203	.	-	0	ID=cds1175;Parent=gene1309;Dbxref=Genbank:YP_402970.1,GeneID:3798764;Name=YP_402970.1;Note=''with component II%2C the glutamine amidotransferase%2C catalyzes the formation of anthranilate from chorismate and glutamine'';gbkey=CDS;gene=trpE;product=anthranilate synthase component I;protein_id=YP_402970.1;transl_table=11
NC_007606.1	RefSeq	gene	1234477	1235358	.	+	.	ID=gene1310;Dbxref=GeneID:3797553;Name=yciV;Note=SDY1334;gbkey=Gene;gene=yciV;gene_biotype=protein_coding;locus_tag=SDY_1334
NC_007606.1	RefSeq	CDS	1234477	1235358	.	+	0	ID=cds1176;Parent=gene1310;Dbxref=Genbank:YP_402972.1,GeneID:3797553;Name=YP_402972.1;Note=Code: R%3B COG: COG0613;gbkey=CDS;gene=yciV;product=metal-dependent phosphoesterase;protein_id=YP_402972.1;transl_table=11
NC_007606.1	RefSeq	gene	1235319	1235975	.	+	.	ID=gene1311;Dbxref=GeneID:3797554;Name=yciO;Note=SDY1335;gbkey=Gene;gene=yciO;gene_biotype=protein_coding;locus_tag=SDY_1335
NC_007606.1	RefSeq	CDS	1235319	1235975	.	+	0	ID=cds1177;Parent=gene1311;Dbxref=Genbank:YP_402973.1,GeneID:3797554;Name=YP_402973.1;Note=Code: J%3B COG: COG0009;gbkey=CDS;gene=yciO;product=hypothetical protein;protein_id=YP_402973.1;transl_table=11
NC_007606.1	RefSeq	region	1235985	1236752	.	+	.	ID=id223;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1236040	1236315	.	+	.	ID=gene1312;Dbxref=GeneID:3797555;Name=insA;Note=SDY1336;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1336
NC_007606.1	RefSeq	CDS	1236040	1236315	.	+	0	ID=cds1178;Parent=gene1312;Dbxref=Genbank:YP_402974.1,GeneID:3797555;Name=YP_402974.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402974.1;transl_table=11
NC_007606.1	RefSeq	gene	1236360	1236737	.	+	.	ID=gene1313;Dbxref=GeneID:3797556;Name=insB;Note=SDY1337;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1337
NC_007606.1	RefSeq	CDS	1236360	1236737	.	+	0	ID=cds1179;Parent=gene1313;Dbxref=Genbank:YP_402975.1,GeneID:3797556;Name=YP_402975.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402975.1;transl_table=11
NC_007606.1	RefSeq	gene	1236766	1237191	.	+	.	ID=gene1314;Dbxref=GeneID:3797557;Name=SDY_1338;Note=SDY1338;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1338
NC_007606.1	RefSeq	CDS	1236766	1237191	.	+	0	ID=cds1180;Parent=gene1314;Dbxref=Genbank:YP_402976.1,GeneID:3797557;Name=YP_402976.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402976.1;transl_table=11
NC_007606.1	RefSeq	gene	1237404	1238276	.	+	.	ID=gene1315;Dbxref=GeneID:3797558;Name=yciL;Note=SDY1339;gbkey=Gene;gene=yciL;gene_biotype=protein_coding;locus_tag=SDY_1339
NC_007606.1	RefSeq	CDS	1237404	1238276	.	+	0	ID=cds1181;Parent=gene1315;Dbxref=Genbank:YP_402977.1,GeneID:3797558;Name=YP_402977.1;Note=catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA;gbkey=CDS;gene=yciL;product=23S rRNA pseudouridylate synthase B;protein_id=YP_402977.1;transl_table=11
NC_007606.1	RefSeq	gene	1238316	1238906	.	-	.	ID=gene1316;Dbxref=GeneID:3797559;Name=btuR;Note=SDY1340;gbkey=Gene;gene=btuR;gene_biotype=protein_coding;locus_tag=SDY_1340
NC_007606.1	RefSeq	CDS	1238316	1238906	.	-	0	ID=cds1182;Parent=gene1316;Dbxref=Genbank:YP_402978.1,GeneID:3797559;Name=YP_402978.1;Note=''catalyzes the formation of adenosylcob(III)yrinic acid a%2Cc-diamide from cob(I)yrinic acid a%2Cc-diamide'';gbkey=CDS;gene=btuR;product=cob(I)yrinic acid a%2Cc-diamide adenosyltransferase;protein_id=YP_402978.1;transl_table=11
NC_007606.1	RefSeq	gene	1238903	1239661	.	-	.	ID=gene1317;Dbxref=GeneID:3797560;Name=yciK;Note=SDY1341;gbkey=Gene;gene=yciK;gene_biotype=protein_coding;locus_tag=SDY_1341
NC_007606.1	RefSeq	CDS	1238903	1239661	.	-	0	ID=cds1183;Parent=gene1317;Dbxref=Genbank:YP_402979.1,GeneID:3797560;Name=YP_402979.1;Note=Code: IQR%3B COG: COG1028;gbkey=CDS;gene=yciK;product=short chain dehydrogenase;protein_id=YP_402979.1;transl_table=11
NC_007606.1	RefSeq	gene	1239881	1240921	.	+	.	ID=gene1318;Dbxref=GeneID:3797561;Name=sohB;Note=SDY1342;gbkey=Gene;gene=sohB;gene_biotype=protein_coding;locus_tag=SDY_1342
NC_007606.1	RefSeq	CDS	1239881	1240921	.	+	0	ID=cds1184;Parent=gene1318;Dbxref=Genbank:YP_402980.1,GeneID:3797561;Name=YP_402980.1;Note=SohB%3B periplasmic protein%3B member of the peptidase S49 family;gbkey=CDS;gene=sohB;product=periplasmic protease;protein_id=YP_402980.1;transl_table=11
NC_007606.1	RefSeq	gene	1240957	1241208	.	-	.	ID=gene1319;Dbxref=GeneID:3797562;Name=yciN;Note=SDY1343;gbkey=Gene;gene=yciN;gene_biotype=protein_coding;locus_tag=SDY_1343
NC_007606.1	RefSeq	CDS	1240957	1241208	.	-	0	ID=cds1185;Parent=gene1319;Dbxref=Genbank:YP_402981.1,GeneID:3797562;Name=YP_402981.1;gbkey=CDS;gene=yciN;product=hypothetical protein;protein_id=YP_402981.1;transl_table=11
NC_007606.1	RefSeq	gene	1241588	1244185	.	+	.	ID=gene1320;Dbxref=GeneID:3797563;Name=topA;Note=SDY1344;gbkey=Gene;gene=topA;gene_biotype=protein_coding;locus_tag=SDY_1344
NC_007606.1	RefSeq	CDS	1241588	1244185	.	+	0	ID=cds1186;Parent=gene1320;Dbxref=Genbank:YP_402982.1,GeneID:3797563;Name=YP_402982.1;Note=''catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining%2C maintains net negative superhelicity'';gbkey=CDS;gene=topA;product=DNA topoisomerase I;protein_id=YP_402982.1;transl_table=11
NC_007606.1	RefSeq	gene	1244395	1245369	.	+	.	ID=gene1321;Dbxref=GeneID:3797564;Name=cysB;Note=SDY1345;gbkey=Gene;gene=cysB;gene_biotype=protein_coding;locus_tag=SDY_1345
NC_007606.1	RefSeq	CDS	1244395	1245369	.	+	0	ID=cds1187;Parent=gene1321;Dbxref=Genbank:YP_402983.1,GeneID:3797564;Name=YP_402983.1;Note=LysR-type transcriptional regulator%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon%3B autoregulates expression%3B crystal structure of Klebsiella aerogenes showed tetramer formation;gbkey=CDS;gene=cysB;product=transcriptional regulator CysB;protein_id=YP_402983.1;transl_table=11
NC_007606.1	RefSeq	region	1245614	1246381	.	-	.	ID=id224;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1245629	1246006	.	-	.	ID=gene1322;Dbxref=GeneID:3797565;Name=insB;Note=SDY1346;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1346
NC_007606.1	RefSeq	CDS	1245629	1246006	.	-	0	ID=cds1188;Parent=gene1322;Dbxref=Genbank:YP_402984.1,GeneID:3797565;Name=YP_402984.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402984.1;transl_table=11
NC_007606.1	RefSeq	gene	1246051	1246326	.	-	.	ID=gene1323;Dbxref=GeneID:3797566;Name=insA;Note=SDY1347;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1347
NC_007606.1	RefSeq	CDS	1246051	1246326	.	-	0	ID=cds1189;Parent=gene1323;Dbxref=Genbank:YP_402985.1,GeneID:3797566;Name=YP_402985.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402985.1;transl_table=11
NC_007606.1	RefSeq	gene	1246440	1246604	.	+	.	ID=gene1324;Dbxref=GeneID:3797567;Name=SDY_1348;Note=SDY1348;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1348
NC_007606.1	RefSeq	CDS	1246440	1246604	.	+	0	ID=cds1190;Parent=gene1324;Dbxref=Genbank:YP_402986.1,GeneID:3797567;Name=YP_402986.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402986.1;transl_table=11
NC_007606.1	RefSeq	gene	1246586	1246774	.	+	.	ID=gene1325;Dbxref=GeneID:3797568;Name=yciX;Note=SDY1349;gbkey=Gene;gene=yciX;gene_biotype=protein_coding;locus_tag=SDY_1349
NC_007606.1	RefSeq	CDS	1246586	1246774	.	+	0	ID=cds1191;Parent=gene1325;Dbxref=Genbank:YP_402987.1,GeneID:3797568;Name=YP_402987.1;gbkey=CDS;gene=yciX;product=hypothetical protein;protein_id=YP_402987.1;transl_table=11
NC_007606.1	RefSeq	gene	1247147	1250989	.	+	.	ID=gene1326;Dbxref=GeneID:3797569;Name=acnA;Note=SDY1350%3B contains IS600 insertion%3B original product: aconitate hydrase 1;gbkey=Gene;gene=acnA;gene_biotype=pseudogene;locus_tag=SDY_1350;pseudo=true
NC_007606.1	RefSeq	region	1249194	1250459	.	-	.	ID=id225;gbkey=mobile_element;gene=acnA
NC_007606.1	RefSeq	gene	1250093	1250395	.	-	.	ID=gene1327;Dbxref=GeneID:3797571;Name=SDY_1352;Note=SDY1352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1352
NC_007606.1	RefSeq	CDS	1250093	1250395	.	-	0	ID=cds1192;Parent=gene1327;Dbxref=Genbank:YP_402989.1,GeneID:3797571;Name=YP_402989.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_402989.1;transl_table=11
NC_007606.1	RefSeq	gene	1251155	1251745	.	-	.	ID=gene1328;Dbxref=GeneID:3797046;Name=ribA;Note=SDY1353;gbkey=Gene;gene=ribA;gene_biotype=protein_coding;locus_tag=SDY_1353
NC_007606.1	RefSeq	CDS	1251155	1251745	.	-	0	ID=cds1193;Parent=gene1328;Dbxref=Genbank:YP_402990.1,GeneID:3797046;Name=YP_402990.1;Note=''catalyzes the conversion of GTP to formate and 2%2C5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate'';gbkey=CDS;gene=ribA;product=GTP cyclohydrolase II;protein_id=YP_402990.1;transl_table=11
NC_007606.1	RefSeq	gene	1251915	1252679	.	+	.	ID=gene1329;Dbxref=GeneID:3797047;Name=pgpB;Note=SDY1354;gbkey=Gene;gene=pgpB;gene_biotype=protein_coding;locus_tag=SDY_1354
NC_007606.1	RefSeq	CDS	1251915	1252679	.	+	0	ID=cds1194;Parent=gene1329;Dbxref=Genbank:YP_402991.1,GeneID:3797047;Name=YP_402991.1;Note=Code: I%3B COG: COG0671;gbkey=CDS;gene=pgpB;product=phosphatidylglycerophosphatase B;protein_id=YP_402991.1;transl_table=11
NC_007606.1	RefSeq	gene	1252828	1253136	.	+	.	ID=gene1330;Dbxref=GeneID:3797048;Name=yciS;Note=SDY1355;gbkey=Gene;gene=yciS;gene_biotype=protein_coding;locus_tag=SDY_1355
NC_007606.1	RefSeq	CDS	1252828	1253136	.	+	0	ID=cds1195;Parent=gene1330;Dbxref=Genbank:YP_402992.1,GeneID:3797048;Name=YP_402992.1;Note=Code: S%3B COG: COG3771;gbkey=CDS;gene=yciS;product=hypothetical protein;protein_id=YP_402992.1;transl_table=11
NC_007606.1	RefSeq	gene	1253143	1254312	.	+	.	ID=gene1331;Dbxref=GeneID:3797049;Name=yciM;Note=SDY1356;gbkey=Gene;gene=yciM;gene_biotype=protein_coding;locus_tag=SDY_1356
NC_007606.1	RefSeq	CDS	1253143	1254312	.	+	0	ID=cds1196;Parent=gene1331;Dbxref=Genbank:YP_402993.1,GeneID:3797049;Name=YP_402993.1;Note=Code: G%3B COG: COG2956;gbkey=CDS;gene=yciM;product=hypothetical protein;protein_id=YP_402993.1;transl_table=11
NC_007606.1	RefSeq	gene	1254505	1255242	.	+	.	ID=gene1332;Dbxref=GeneID:3797050;Name=pyrF;Note=SDY1357;gbkey=Gene;gene=pyrF;gene_biotype=protein_coding;locus_tag=SDY_1357
NC_007606.1	RefSeq	CDS	1254505	1255242	.	+	0	ID=cds1197;Parent=gene1332;Dbxref=Genbank:YP_402994.1,GeneID:3797050;Name=YP_402994.1;Note=type 1 subfamily%3B involved in last step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate to UMP and carbon dioxide%3B OMP decarboxylase%3B OMPDCase%3B OMPdecase;gbkey=CDS;gene=pyrF;product=orotidine 5'-phosphate decarboxylase;protein_id=YP_402994.1;transl_table=11
NC_007606.1	RefSeq	gene	1255239	1255568	.	+	.	ID=gene1333;Dbxref=GeneID:3797051;Name=yciH;Note=SDY1358;gbkey=Gene;gene=yciH;gene_biotype=protein_coding;locus_tag=SDY_1358
NC_007606.1	RefSeq	CDS	1255239	1255568	.	+	0	ID=cds1198;Parent=gene1333;Dbxref=Genbank:YP_402995.1,GeneID:3797051;Name=YP_402995.1;Note=involved in start site selection during the initiation of translation;gbkey=CDS;gene=yciH;product=translation initiation factor Sui1;protein_id=YP_402995.1;transl_table=11
NC_007606.1	RefSeq	region	1255851	1256618	.	-	.	ID=id226;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1255866	1256243	.	-	.	ID=gene1334;Dbxref=GeneID:3797052;Name=insB;Note=SDY1359;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1359
NC_007606.1	RefSeq	CDS	1255866	1256243	.	-	0	ID=cds1199;Parent=gene1334;Dbxref=Genbank:YP_402996.1,GeneID:3797052;Name=YP_402996.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_402996.1;transl_table=11
NC_007606.1	RefSeq	gene	1256288	1256563	.	-	.	ID=gene1335;Dbxref=GeneID:3797053;Name=insA;Note=SDY1360;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1360
NC_007606.1	RefSeq	CDS	1256288	1256563	.	-	0	ID=cds1200;Parent=gene1335;Dbxref=Genbank:YP_402997.1,GeneID:3797053;Name=YP_402997.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_402997.1;transl_table=11
NC_007606.1	RefSeq	gene	1256729	1257478	.	-	.	ID=gene1336;Dbxref=GeneID:3797054;Name=SDY_1361;Note=SDY1361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1361
NC_007606.1	RefSeq	CDS	1256729	1257478	.	-	0	ID=cds1201;Parent=gene1336;Dbxref=Genbank:YP_402998.1,GeneID:3797054;Name=YP_402998.1;Note=Code: KG%3B COG: COG1349;gbkey=CDS;product=DeoR-type transcriptional regulator;protein_id=YP_402998.1;transl_table=11
NC_007606.1	RefSeq	gene	1257568	1257741	.	-	.	ID=gene1337;Dbxref=GeneID:3797055;Name=SDY_1362;Note=SDY1362;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1362
NC_007606.1	RefSeq	CDS	1257568	1257741	.	-	0	ID=cds1202;Parent=gene1337;Dbxref=Genbank:YP_402999.1,GeneID:3797055;Name=YP_402999.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_402999.1;transl_table=11
NC_007606.1	RefSeq	gene	1257889	1259848	.	-	.	ID=gene1338;Dbxref=GeneID:3797056;Name=yciR;Note=''SDY1363%3B frameshift and contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yciR;gene_biotype=pseudogene;locus_tag=SDY_1363;pseudo=true
NC_007606.1	RefSeq	region	1259875	1260642	.	+	.	ID=id227;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1259930	1260205	.	+	.	ID=gene1339;Dbxref=GeneID:3797057;Name=insA;Note=SDY1364;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1364
NC_007606.1	RefSeq	CDS	1259930	1260205	.	+	0	ID=cds1203;Parent=gene1339;Dbxref=Genbank:YP_403000.1,GeneID:3797057;Name=YP_403000.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403000.1;transl_table=11
NC_007606.1	RefSeq	gene	1260250	1260627	.	+	.	ID=gene1340;Dbxref=GeneID:3797058;Name=insB;Note=SDY1365;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1365
NC_007606.1	RefSeq	CDS	1260250	1260627	.	+	0	ID=cds1204;Parent=gene1340;Dbxref=Genbank:YP_403001.1,GeneID:3797058;Name=YP_403001.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403001.1;transl_table=11
NC_007606.1	RefSeq	gene	1260887	1262821	.	-	.	ID=gene1341;Dbxref=GeneID:3797059;Name=rnb;Note=SDY1366;gbkey=Gene;gene=rnb;gene_biotype=protein_coding;locus_tag=SDY_1366
NC_007606.1	RefSeq	CDS	1260887	1262821	.	-	0	ID=cds1205;Parent=gene1341;Dbxref=Genbank:YP_403002.1,GeneID:3797059;Name=YP_403002.1;Note=Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction;gbkey=CDS;gene=rnb;product=exoribonuclease II;protein_id=YP_403002.1;transl_table=11
NC_007606.1	RefSeq	gene	1264141	1264929	.	-	.	ID=gene1342;Dbxref=GeneID:3797061;Name=fabI;Note=SDY1368;gbkey=Gene;gene=fabI;gene_biotype=protein_coding;locus_tag=SDY_1368
NC_007606.1	RefSeq	CDS	1264141	1264929	.	-	0	ID=cds1206;Parent=gene1342;Dbxref=Genbank:YP_403004.1,GeneID:3797061;Name=YP_403004.1;Note=Catalyzes a key regulatory step in fatty acid biosynthesis;gbkey=CDS;gene=fabI;product=enoyl-ACP reductase;protein_id=YP_403004.1;transl_table=11
NC_007606.1	RefSeq	region	1265352	1266117	.	-	.	ID=id228;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1265366	1265761	.	-	.	ID=gene1343;Dbxref=GeneID:3797062;Name=SDY_1369;Note=SDY1369;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1369
NC_007606.1	RefSeq	CDS	1265366	1265761	.	-	0	ID=cds1207;Parent=gene1343;Dbxref=Genbank:YP_403005.1,GeneID:3797062;Name=YP_403005.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403005.1;transl_table=11
NC_007606.1	RefSeq	gene	1265956	1266249	.	+	.	ID=gene1344;Dbxref=GeneID:3797063;Name=SDY_1370;Note=SDY1370;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1370
NC_007606.1	RefSeq	CDS	1265956	1266249	.	+	0	ID=cds1208;Parent=gene1344;Dbxref=Genbank:YP_403006.1,GeneID:3797063;Name=YP_403006.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403006.1;transl_table=11
NC_007606.1	RefSeq	region	1266232	1266997	.	-	.	ID=id229;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1266246	1266641	.	-	.	ID=gene1345;Dbxref=GeneID:3797064;Name=SDY_1371;Note=SDY1371;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1371
NC_007606.1	RefSeq	CDS	1266246	1266641	.	-	0	ID=cds1209;Parent=gene1345;Dbxref=Genbank:YP_403007.1,GeneID:3797064;Name=YP_403007.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403007.1;transl_table=11
NC_007606.1	RefSeq	gene	1266668	1266940	.	-	.	ID=gene1346;Dbxref=GeneID:18263017;Name=SDY_1370a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1370a
NC_007606.1	RefSeq	CDS	1266668	1266940	.	-	0	ID=cds1210;Parent=gene1346;Dbxref=Genbank:YP_009000703.1,GeneID:18263017;Name=YP_009000703.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000703.1;transl_table=11
NC_007606.1	RefSeq	gene	1267290	1270391	.	+	.	ID=gene1347;Dbxref=GeneID:3797065;Name=SDY_1372;Note=SDY1372;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1372
NC_007606.1	RefSeq	CDS	1267290	1270391	.	+	0	ID=cds1211;Parent=gene1347;Dbxref=Genbank:YP_403008.1,GeneID:3797065;Name=YP_403008.1;Note=Code: V%3B COG: COG0841;gbkey=CDS;product=multidrug-efflux transport protein;protein_id=YP_403008.1;transl_table=11
NC_007606.1	RefSeq	gene	1270401	1271774	.	+	.	ID=gene1348;Dbxref=GeneID:3796539;Name=SDY_1373;Note=SDY1373;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1373;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1271783	1272934	.	+	.	ID=gene1349;Dbxref=GeneID:3796541;Name=SDY_1375;Note=SDY1375;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1375
NC_007606.1	RefSeq	CDS	1271783	1272934	.	+	0	ID=cds1212;Parent=gene1349;Dbxref=Genbank:YP_403011.1,GeneID:3796541;Name=YP_403011.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;product=membrane transport protein;protein_id=YP_403011.1;transl_table=11
NC_007606.1	RefSeq	region	1272952	1274325	.	+	.	ID=id230;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1272983	1274179	.	-	.	ID=gene1350;Dbxref=GeneID:3796542;Name=SDY_1376;Note=SDY1376;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1376
NC_007606.1	RefSeq	CDS	1272983	1274179	.	-	0	ID=cds1213;Parent=gene1350;Dbxref=Genbank:YP_403012.1,GeneID:3796542;Name=YP_403012.1;Note=Code: L%3B COG: COG3547;gbkey=CDS;product=insertion element IS110 transposase;protein_id=YP_403012.1;transl_table=11
NC_007606.1	RefSeq	gene	1274438	1275244	.	-	.	ID=gene1351;Dbxref=GeneID:3796543;Name=sapF;Note=SDY1377;gbkey=Gene;gene=sapF;gene_biotype=protein_coding;locus_tag=SDY_1377
NC_007606.1	RefSeq	CDS	1274438	1275244	.	-	0	ID=cds1214;Parent=gene1351;Dbxref=Genbank:YP_403013.1,GeneID:3796543;Name=YP_403013.1;Note=Code: V%3B COG: COG4167;gbkey=CDS;gene=sapF;product=peptide ABC transporter ATP-binding protein;protein_id=YP_403013.1;transl_table=11
NC_007606.1	RefSeq	gene	1275246	1276238	.	-	.	ID=gene1352;Dbxref=GeneID:3796544;Name=sapD;Note=SDY1378;gbkey=Gene;gene=sapD;gene_biotype=protein_coding;locus_tag=SDY_1378
NC_007606.1	RefSeq	CDS	1275246	1276238	.	-	0	ID=cds1215;Parent=gene1352;Dbxref=Genbank:YP_403014.1,GeneID:3796544;Name=YP_403014.1;Note=Code: V%3B COG: COG4170;gbkey=CDS;gene=sapD;product=peptide ABC transporter ATP-binding protein;protein_id=YP_403014.1;transl_table=11
NC_007606.1	RefSeq	gene	1276238	1277128	.	-	.	ID=gene1353;Dbxref=GeneID:3796545;Name=sapC;Note=SDY1379;gbkey=Gene;gene=sapC;gene_biotype=protein_coding;locus_tag=SDY_1379
NC_007606.1	RefSeq	CDS	1276238	1277128	.	-	0	ID=cds1216;Parent=gene1353;Dbxref=Genbank:YP_403015.1,GeneID:3796545;Name=YP_403015.1;Note=Code: V%3B COG: COG4171;gbkey=CDS;gene=sapC;product=SapC protein;protein_id=YP_403015.1;transl_table=11
NC_007606.1	RefSeq	gene	1277263	1278492	.	+	.	ID=gene1354;Dbxref=GeneID:3796546;Name=int;Note=SDY1380;gbkey=Gene;gene=int;gene_biotype=protein_coding;locus_tag=SDY_1380
NC_007606.1	RefSeq	CDS	1277263	1278492	.	+	0	ID=cds1217;Parent=gene1354;Dbxref=Genbank:YP_403016.1,GeneID:3796546;Name=YP_403016.1;Note=Code: L%3B COG: COG0582;gbkey=CDS;gene=int;product=integrase;protein_id=YP_403016.1;transl_table=11
NC_007606.1	RefSeq	region	1278651	1279416	.	+	.	ID=id231;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1278706	1278981	.	+	.	ID=gene1355;Dbxref=GeneID:3796547;Name=insA;Note=SDY1381;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1381
NC_007606.1	RefSeq	CDS	1278706	1278981	.	+	0	ID=cds1218;Parent=gene1355;Dbxref=Genbank:YP_403017.1,GeneID:3796547;Name=YP_403017.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403017.1;transl_table=11
NC_007606.1	RefSeq	gene	1279827	1280507	.	-	.	ID=gene1356;Dbxref=GeneID:3796548;Name=SDY_1382;Note=SDY1382;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1382
NC_007606.1	RefSeq	CDS	1279827	1280507	.	-	0	ID=cds1219;Parent=gene1356;Dbxref=Genbank:YP_403018.1,GeneID:3796548;Name=YP_403018.1;gbkey=CDS;product=exonuclease;protein_id=YP_403018.1;transl_table=11
NC_007606.1	RefSeq	gene	1280504	1281289	.	-	.	ID=gene1357;Dbxref=GeneID:3796549;Name=bet;Note=SDY1383;gbkey=Gene;gene=bet;gene_biotype=protein_coding;locus_tag=SDY_1383
NC_007606.1	RefSeq	CDS	1280504	1281289	.	-	0	ID=cds1220;Parent=gene1357;Dbxref=Genbank:YP_403019.1,GeneID:3796549;Name=YP_403019.1;gbkey=CDS;gene=bet;product=recombination protein Bet;protein_id=YP_403019.1;transl_table=11
NC_007606.1	RefSeq	gene	1281295	1281591	.	-	.	ID=gene1358;Dbxref=GeneID:3796550;Name=gam;Note=SDY1384;gbkey=Gene;gene=gam;gene_biotype=protein_coding;locus_tag=SDY_1384
NC_007606.1	RefSeq	CDS	1281295	1281591	.	-	0	ID=cds1221;Parent=gene1358;Dbxref=Genbank:YP_403020.1,GeneID:3796550;Name=YP_403020.1;gbkey=CDS;gene=gam;product=host-nuclease inhibitor protein Gam;protein_id=YP_403020.1;transl_table=11
NC_007606.1	RefSeq	gene	1281588	1282082	.	-	.	ID=gene1359;Dbxref=GeneID:3796551;Name=SDY_1385;Note=SDY1385;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1385
NC_007606.1	RefSeq	CDS	1281588	1282082	.	-	0	ID=cds1222;Parent=gene1359;Dbxref=Genbank:YP_403021.1,GeneID:3796551;Name=YP_403021.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403021.1;transl_table=11
NC_007606.1	RefSeq	region	1282293	1282410	.	-	.	ID=id232;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	1282411	1283677	.	+	.	ID=id233;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1282475	1282777	.	+	.	ID=gene1360;Dbxref=GeneID:3796552;Name=SDY_1386;Note=SDY1386;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1386
NC_007606.1	RefSeq	CDS	1282475	1282777	.	+	0	ID=cds1223;Parent=gene1360;Dbxref=Genbank:YP_403022.1,GeneID:3796552;Name=YP_403022.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403022.1;transl_table=11
NC_007606.1	RefSeq	gene	1283865	1284812	.	+	.	ID=gene1361;Dbxref=GeneID:3796555;Name=stxA;Note=SDY1389;gbkey=Gene;gene=stxA;gene_biotype=protein_coding;locus_tag=SDY_1389
NC_007606.1	RefSeq	CDS	1283865	1284812	.	+	0	ID=cds1224;Parent=gene1361;Dbxref=Genbank:YP_403025.1,GeneID:3796555;Name=YP_403025.1;gbkey=CDS;gene=stxA;product=Shiga toxin subunit A;protein_id=YP_403025.1;transl_table=11
NC_007606.1	RefSeq	gene	1284822	1285091	.	+	.	ID=gene1362;Dbxref=GeneID:3796556;Name=stxB;Note=SDY1390;gbkey=Gene;gene=stxB;gene_biotype=protein_coding;locus_tag=SDY_1390
NC_007606.1	RefSeq	CDS	1284822	1285091	.	+	0	ID=cds1225;Parent=gene1362;Dbxref=Genbank:YP_403026.1,GeneID:3796556;Name=YP_403026.1;gbkey=CDS;gene=stxB;product=Shiga toxin subunit B;protein_id=YP_403026.1;transl_table=11
NC_007606.1	RefSeq	gene	1285601	1287511	.	+	.	ID=gene1363;Dbxref=GeneID:3796557;Name=yjhS;Note=SDY1391;gbkey=Gene;gene=yjhS;gene_biotype=protein_coding;locus_tag=SDY_1391
NC_007606.1	RefSeq	CDS	1285601	1287511	.	+	0	ID=cds1226;Parent=gene1363;Dbxref=Genbank:YP_403027.1,GeneID:3796557;Name=YP_403027.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;gene=yjhS;product=hypothetical protein;protein_id=YP_403027.1;transl_table=11
NC_007606.1	RefSeq	gene	1287698	1288105	.	+	.	ID=gene1364;Dbxref=GeneID:3799150;Name=SDY_1392;Note=SDY1392;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1392
NC_007606.1	RefSeq	CDS	1287698	1288105	.	+	0	ID=cds1227;Parent=gene1364;Dbxref=Genbank:YP_403028.1,GeneID:3799150;Name=YP_403028.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403028.1;transl_table=11
NC_007606.1	RefSeq	gene	1288182	1288397	.	+	.	ID=gene1365;Dbxref=GeneID:3799151;Name=SDY_1393;Note=SDY1393;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1393
NC_007606.1	RefSeq	CDS	1288182	1288397	.	+	0	ID=cds1228;Parent=gene1365;Dbxref=Genbank:YP_403029.1,GeneID:3799151;Name=YP_403029.1;gbkey=CDS;product=lysis protein S;protein_id=YP_403029.1;transl_table=11
NC_007606.1	RefSeq	gene	1288402	1288935	.	+	.	ID=gene1366;Dbxref=GeneID:3799152;Name=SDY_1394;Note=SDY1394;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1394
NC_007606.1	RefSeq	CDS	1288402	1288935	.	+	0	ID=cds1229;Parent=gene1366;Dbxref=Genbank:YP_403030.1,GeneID:3799152;Name=YP_403030.1;Note=Code: R%3B COG: COG3772;gbkey=CDS;product=endolysin;protein_id=YP_403030.1;transl_table=11
NC_007606.1	RefSeq	region	1289151	1290138	.	-	.	ID=id234;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1289159	1289998	.	-	.	ID=gene1367;Dbxref=GeneID:3799153;Name=SDY_1395;Note=SDY1395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1395
NC_007606.1	RefSeq	CDS	1289159	1289998	.	-	0	ID=cds1230;Parent=gene1367;Dbxref=Genbank:YP_403031.1,GeneID:3799153;Name=YP_403031.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS911 integrase core domain-containing protein;protein_id=YP_403031.1;transl_table=11
NC_007606.1	RefSeq	region	1290139	1290906	.	+	.	ID=id235;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1290194	1290469	.	+	.	ID=gene1368;Dbxref=GeneID:3799154;Name=insA;Note=SDY1396;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1396
NC_007606.1	RefSeq	CDS	1290194	1290469	.	+	0	ID=cds1231;Parent=gene1368;Dbxref=Genbank:YP_403032.1,GeneID:3799154;Name=YP_403032.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403032.1;transl_table=11
NC_007606.1	RefSeq	gene	1290514	1290891	.	+	.	ID=gene1369;Dbxref=GeneID:3799155;Name=insB;Note=SDY1397;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1397
NC_007606.1	RefSeq	CDS	1290514	1290891	.	+	0	ID=cds1232;Parent=gene1369;Dbxref=Genbank:YP_403033.1,GeneID:3799155;Name=YP_403033.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403033.1;transl_table=11
NC_007606.1	RefSeq	gene	1290885	1291214	.	-	.	ID=gene1370;Dbxref=GeneID:3799156;Name=ycjW;Note=SDY1398%3B truncated%3B original product:  LACI-type transcriptional regulator;gbkey=Gene;gene=ycjW;gene_biotype=pseudogene;locus_tag=SDY_1398;pseudo=true
NC_007606.1	RefSeq	gene	1291370	1292767	.	+	.	ID=gene1371;Dbxref=GeneID:3799157;Name=ycjX;Note=SDY1399;gbkey=Gene;gene=ycjX;gene_biotype=protein_coding;locus_tag=SDY_1399
NC_007606.1	RefSeq	CDS	1291370	1292767	.	+	0	ID=cds1233;Parent=gene1371;Dbxref=Genbank:YP_403034.1,GeneID:3799157;Name=YP_403034.1;Note=Code: R%3B COG: COG3106;gbkey=CDS;gene=ycjX;product=hypothetical protein;protein_id=YP_403034.1;transl_table=11
NC_007606.1	RefSeq	gene	1292764	1293798	.	+	.	ID=gene1372;Dbxref=GeneID:3799158;Name=ycjF;Note=SDY1400;gbkey=Gene;gene=ycjF;gene_biotype=protein_coding;locus_tag=SDY_1400
NC_007606.1	RefSeq	CDS	1292764	1293798	.	+	0	ID=cds1234;Parent=gene1372;Dbxref=Genbank:YP_403035.1,GeneID:3799158;Name=YP_403035.1;Note=Code: S%3B COG: COG3768;gbkey=CDS;gene=ycjF;product=hypothetical protein;protein_id=YP_403035.1;transl_table=11
NC_007606.1	RefSeq	gene	1293973	1295514	.	+	.	ID=gene1373;Dbxref=GeneID:3799159;Name=tyrR;Note=SDY1401;gbkey=Gene;gene=tyrR;gene_biotype=protein_coding;locus_tag=SDY_1401
NC_007606.1	RefSeq	CDS	1293973	1295514	.	+	0	ID=cds1235;Parent=gene1373;Dbxref=Genbank:YP_403036.1,GeneID:3799159;Name=YP_403036.1;Note=regulates genes involved in the biosynthesis and transport of aromatic amino acids;gbkey=CDS;gene=tyrR;product=DNA-binding transcriptional regulator TyrR;protein_id=YP_403036.1;transl_table=11
NC_007606.1	RefSeq	gene	1295558	1296064	.	-	.	ID=gene1374;Dbxref=GeneID:3799160;Name=tpx;Note=SDY1402;gbkey=Gene;gene=tpx;gene_biotype=protein_coding;locus_tag=SDY_1402
NC_007606.1	RefSeq	CDS	1295558	1296064	.	-	0	ID=cds1236;Parent=gene1374;Dbxref=Genbank:YP_403037.1,GeneID:3799160;Name=YP_403037.1;Note=antioxidant activity%3B thioredoxin-dependent thiol peroxidase%3B forms homodimers in solution%3B shows substrate specificity to alkyl hydroperoxides%3B periplasmic protein;gbkey=CDS;gene=tpx;product=thiol peroxidase;protein_id=YP_403037.1;transl_table=11
NC_007606.1	RefSeq	gene	1296141	1297148	.	+	.	ID=gene1375;Dbxref=GeneID:3799161;Name=ycjG;Note=SDY1403;gbkey=Gene;gene=ycjG;gene_biotype=protein_coding;locus_tag=SDY_1403
NC_007606.1	RefSeq	CDS	1296141	1297148	.	+	0	ID=cds1237;Parent=gene1375;Dbxref=Genbank:YP_403038.1,GeneID:3799161;Name=YP_403038.1;Note=Code: MR%3B COG: COG4948;gbkey=CDS;gene=ycjG;product=muconate cycloisomerase I;protein_id=YP_403038.1;transl_table=11
NC_007606.1	RefSeq	gene	1297123	1297911	.	-	.	ID=gene1376;Dbxref=GeneID:3799162;Name=ycjI;Note=SDY1404;gbkey=Gene;gene=ycjI;gene_biotype=protein_coding;locus_tag=SDY_1404
NC_007606.1	RefSeq	CDS	1297123	1297911	.	-	0	ID=cds1238;Parent=gene1376;Dbxref=Genbank:YP_403039.1,GeneID:3799162;Name=YP_403039.1;Note=Code: E%3B COG: COG2866;gbkey=CDS;gene=ycjI;product=murein peptide amidase A;protein_id=YP_403039.1;transl_table=11
NC_007606.1	RefSeq	region	1298285	1299050	.	-	.	ID=id236;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1298299	1298694	.	-	.	ID=gene1377;Dbxref=GeneID:3799163;Name=SDY_1405;Note=SDY1405;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1405
NC_007606.1	RefSeq	CDS	1298299	1298694	.	-	0	ID=cds1239;Parent=gene1377;Dbxref=Genbank:YP_403040.1,GeneID:3799163;Name=YP_403040.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403040.1;transl_table=11
NC_007606.1	RefSeq	gene	1298721	1298993	.	-	.	ID=gene1378;Dbxref=GeneID:18263018;Name=SDY_1407a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1407a
NC_007606.1	RefSeq	CDS	1298721	1298993	.	-	0	ID=cds1240;Parent=gene1378;Dbxref=Genbank:YP_009000704.1,GeneID:18263018;Name=YP_009000704.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000704.1;transl_table=11
NC_007606.1	RefSeq	region	1299348	1300117	.	+	.	ID=id237;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1299405	1299677	.	+	.	ID=gene1379;Dbxref=GeneID:18263019;Name=SDY_1408a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1408a
NC_007606.1	RefSeq	CDS	1299405	1299677	.	+	0	ID=cds1241;Parent=gene1379;Dbxref=Genbank:YP_009000705.1,GeneID:18263019;Name=YP_009000705.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000705.1;transl_table=11
NC_007606.1	RefSeq	gene	1299704	1300099	.	+	.	ID=gene1380;Dbxref=GeneID:3799165;Name=SDY_1407;Note=SDY1407;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1407
NC_007606.1	RefSeq	CDS	1299704	1300099	.	+	0	ID=cds1242;Parent=gene1380;Dbxref=Genbank:YP_403042.1,GeneID:3799165;Name=YP_403042.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403042.1;transl_table=11
NC_007606.1	RefSeq	gene	1300229	1301128	.	+	.	ID=gene1381;Dbxref=GeneID:3799166;Name=ycjZ;Note=SDY1408;gbkey=Gene;gene=ycjZ;gene_biotype=protein_coding;locus_tag=SDY_1408
NC_007606.1	RefSeq	CDS	1300229	1301128	.	+	0	ID=cds1243;Parent=gene1381;Dbxref=Genbank:YP_403043.1,GeneID:3799166;Name=YP_403043.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=ycjZ;product=LysR family transcriptional regulator;protein_id=YP_403043.1;transl_table=11
NC_007606.1	RefSeq	gene	1301444	1303078	.	+	.	ID=gene1382;Dbxref=GeneID:3799167;Name=SDY_1409;Note=SDY1409;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1409
NC_007606.1	RefSeq	CDS	1301444	1303078	.	+	0	ID=cds1244;Parent=gene1382;Dbxref=Genbank:YP_403044.1,GeneID:3799167;Name=YP_403044.1;Note=Code: E%3B COG: COG4166;gbkey=CDS;product=transport periplasmic protein;protein_id=YP_403044.1;transl_table=11
NC_007606.1	RefSeq	gene	1303129	1304160	.	-	.	ID=gene1383;Dbxref=GeneID:3799168;Name=SDY_1410;Note=SDY1410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1410
NC_007606.1	RefSeq	CDS	1303129	1304160	.	-	0	ID=cds1245;Parent=gene1383;Dbxref=Genbank:YP_403045.1,GeneID:3799168;Name=YP_403045.1;Note=Code: M%3B COG: COG0668;gbkey=CDS;product=hypothetical protein;protein_id=YP_403045.1;transl_table=11
NC_007606.1	RefSeq	region	1304526	1305293	.	-	.	ID=id238;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1304541	1304918	.	-	.	ID=gene1384;Dbxref=GeneID:3799169;Name=insB;Note=SDY1411;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1411
NC_007606.1	RefSeq	CDS	1304541	1304918	.	-	0	ID=cds1246;Parent=gene1384;Dbxref=Genbank:YP_403046.1,GeneID:3799169;Name=YP_403046.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403046.1;transl_table=11
NC_007606.1	RefSeq	gene	1304963	1305238	.	-	.	ID=gene1385;Dbxref=GeneID:3797918;Name=insA;Note=SDY1412;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1412
NC_007606.1	RefSeq	CDS	1304963	1305238	.	-	0	ID=cds1247;Parent=gene1385;Dbxref=Genbank:YP_403047.1,GeneID:3797918;Name=YP_403047.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403047.1;transl_table=11
NC_007606.1	RefSeq	gene	1305488	1306438	.	-	.	ID=gene1386;Dbxref=GeneID:3797919;Name=ydaA;Note=SDY1413;gbkey=Gene;gene=ydaA;gene_biotype=protein_coding;locus_tag=SDY_1413
NC_007606.1	RefSeq	CDS	1305488	1306438	.	-	0	ID=cds1248;Parent=gene1386;Dbxref=Genbank:YP_403048.1,GeneID:3797919;Name=YP_403048.1;Note=with UspC and UspD is involved in resistance to UV irradiation;gbkey=CDS;gene=ydaA;product=universal stress protein UspE;protein_id=YP_403048.1;transl_table=11
NC_007606.1	RefSeq	region	1306518	1307283	.	-	.	ID=id239;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1306532	1306927	.	-	.	ID=gene1387;Dbxref=GeneID:3797920;Name=SDY_1414;Note=SDY1414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1414
NC_007606.1	RefSeq	CDS	1306532	1306927	.	-	0	ID=cds1249;Parent=gene1387;Dbxref=Genbank:YP_403049.1,GeneID:3797920;Name=YP_403049.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403049.1;transl_table=11
NC_007606.1	RefSeq	gene	1306954	1307226	.	-	.	ID=gene1388;Dbxref=GeneID:18263020;Name=SDY_1414a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1414a
NC_007606.1	RefSeq	CDS	1306954	1307226	.	-	0	ID=cds1250;Parent=gene1388;Dbxref=Genbank:YP_009000706.1,GeneID:18263020;Name=YP_009000706.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000706.1;transl_table=11
NC_007606.1	RefSeq	gene	1307364	1308116	.	-	.	ID=gene1389;Dbxref=GeneID:3797921;Name=fnr;Note=SDY1415;gbkey=Gene;gene=fnr;gene_biotype=protein_coding;locus_tag=SDY_1415
NC_007606.1	RefSeq	CDS	1307364	1308116	.	-	0	ID=cds1251;Parent=gene1389;Dbxref=Genbank:YP_403050.1,GeneID:3797921;Name=YP_403050.1;Note=Global transcription factor that controls the expression of over 100 target genes in response to anoxia;gbkey=CDS;gene=fnr;product=fumarate/nitrate reduction transcriptional regulator;protein_id=YP_403050.1;transl_table=11
NC_007606.1	RefSeq	gene	1308311	1308826	.	-	.	ID=gene1390;Dbxref=GeneID:3797922;Name=ogt;Note=SDY1416;gbkey=Gene;gene=ogt;gene_biotype=protein_coding;locus_tag=SDY_1416
NC_007606.1	RefSeq	CDS	1308311	1308826	.	-	0	ID=cds1252;Parent=gene1390;Dbxref=Genbank:YP_403051.1,GeneID:3797922;Name=YP_403051.1;Note=Code: L%3B COG: COG0350;gbkey=CDS;gene=ogt;product=O-6-alkylguanine-DNA:cysteine-protein methyltransferase;protein_id=YP_403051.1;transl_table=11
NC_007606.1	RefSeq	region	1309389	1310154	.	+	.	ID=id240;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1309446	1309718	.	+	.	ID=gene1391;Dbxref=GeneID:18263021;Name=SDY_1416a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1416a
NC_007606.1	RefSeq	CDS	1309446	1309718	.	+	0	ID=cds1253;Parent=gene1391;Dbxref=Genbank:YP_009000707.1,GeneID:18263021;Name=YP_009000707.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000707.1;transl_table=11
NC_007606.1	RefSeq	gene	1309745	1310140	.	+	.	ID=gene1392;Dbxref=GeneID:3797924;Name=SDY_1418;Note=SDY1418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1418
NC_007606.1	RefSeq	CDS	1309745	1310140	.	+	0	ID=cds1254;Parent=gene1392;Dbxref=Genbank:YP_403053.1,GeneID:3797924;Name=YP_403053.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403053.1;transl_table=11
NC_007606.1	RefSeq	gene	1310832	1311395	.	+	.	ID=gene1393;Dbxref=GeneID:3797925;Name=ydaL;Note=SDY1419;gbkey=Gene;gene=ydaL;gene_biotype=protein_coding;locus_tag=SDY_1419
NC_007606.1	RefSeq	CDS	1310832	1311395	.	+	0	ID=cds1255;Parent=gene1393;Dbxref=Genbank:YP_403054.1,GeneID:3797925;Name=YP_403054.1;Note=Code: S%3B COG: COG2840;gbkey=CDS;gene=ydaL;product=hypothetical protein;protein_id=YP_403054.1;transl_table=11
NC_007606.1	RefSeq	gene	1311416	1311715	.	-	.	ID=gene1394;Dbxref=GeneID:3797926;Name=SDY_1420;Note=SDY1420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1420
NC_007606.1	RefSeq	CDS	1311416	1311715	.	-	0	ID=cds1256;Parent=gene1394;Dbxref=Genbank:YP_403055.1,GeneID:3797926;Name=YP_403055.1;Note=Code: T%3B COG: COG2199;gbkey=CDS;product=hypothetical protein;protein_id=YP_403055.1;transl_table=11
NC_007606.1	RefSeq	region	1311690	1312954	.	+	.	ID=id241;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1311754	1312056	.	+	.	ID=gene1395;Dbxref=GeneID:3797927;Name=SDY_1421;Note=SDY1421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1421
NC_007606.1	RefSeq	CDS	1311754	1312056	.	+	0	ID=cds1257;Parent=gene1395;Dbxref=Genbank:YP_403056.1,GeneID:3797927;Name=YP_403056.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403056.1;transl_table=11
NC_007606.1	RefSeq	gene	1312197	1313003	.	+	.	ID=gene1396;Dbxref=GeneID:3797928;Name=SDY_1422;Note=SDY1422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1422
NC_007606.1	RefSeq	CDS	1312197	1313003	.	+	0	ID=cds1258;Parent=gene1396;Dbxref=Genbank:YP_403057.1,GeneID:3797928;Name=YP_403057.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_403057.1;transl_table=11
NC_007606.1	RefSeq	gene	1312936	1313916	.	-	.	ID=gene1397;Dbxref=GeneID:3797929;Name=SDY_1423;Note=SDY1423;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1423
NC_007606.1	RefSeq	CDS	1312936	1313916	.	-	0	ID=cds1259;Parent=gene1397;Dbxref=Genbank:YP_403058.1,GeneID:3797929;Name=YP_403058.1;Note=Code: T%3B COG: COG2202;gbkey=CDS;product=hypothetical protein;protein_id=YP_403058.1;transl_table=11
NC_007606.1	RefSeq	gene	1314171	1315154	.	+	.	ID=gene1398;Dbxref=GeneID:3797930;Name=zntB;Note=SDY1424;gbkey=Gene;gene=zntB;gene_biotype=protein_coding;locus_tag=SDY_1424
NC_007606.1	RefSeq	CDS	1314171	1315154	.	+	0	ID=cds1260;Parent=gene1398;Dbxref=Genbank:YP_403059.1,GeneID:3797930;Name=YP_403059.1;Note=Code: P%3B COG: COG0598;gbkey=CDS;gene=zntB;product=zinc transporter;protein_id=YP_403059.1;transl_table=11
NC_007606.1	RefSeq	gene	1315632	1316406	.	+	.	ID=gene1399;Dbxref=GeneID:3797931;Name=dbpA;Note=SDY1425%3B frameshift and truncated%3B original product: ATP-dependent RNA helicase;gbkey=Gene;gene=dbpA;gene_biotype=pseudogene;locus_tag=SDY_1425;pseudo=true
NC_007606.1	RefSeq	gene	1316535	1317470	.	-	.	ID=gene1400;Dbxref=GeneID:3797932;Name=ydaO;Note=SDY1426;gbkey=Gene;gene=ydaO;gene_biotype=protein_coding;locus_tag=SDY_1426
NC_007606.1	RefSeq	CDS	1316535	1317470	.	-	0	ID=cds1261;Parent=gene1400;Dbxref=Genbank:YP_403060.1,GeneID:3797932;Name=YP_403060.1;Note=TtcA%3B YdaO%3B catalyzes the thiolation of cytosine 32 in specific tRNAs;gbkey=CDS;gene=ydaO;product=C32 tRNA thiolase;protein_id=YP_403060.1;transl_table=11
NC_007606.1	RefSeq	gene	1317522	1317761	.	-	.	ID=gene1401;Dbxref=GeneID:3797933;Name=SDY_1427;Note=SDY1427;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1427
NC_007606.1	RefSeq	CDS	1317522	1317761	.	-	0	ID=cds1262;Parent=gene1401;Dbxref=Genbank:YP_403061.1,GeneID:3797933;Name=YP_403061.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403061.1;transl_table=11
NC_007606.1	RefSeq	region	1317746	1318564	.	-	.	ID=id242;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1317789	1318583	.	-	.	ID=gene1402;Dbxref=GeneID:3797934;Name=SDY_1428;Note=SDY1428;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1428;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1318565	1319330	.	-	.	ID=id243;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1318580	1318978	.	-	.	ID=gene1403;Dbxref=GeneID:3797935;Name=insB;Note=SDY1429;gbkey=Gene;gene=insB;gene_biotype=pseudogene;locus_tag=SDY_1429;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1319000	1319275	.	-	.	ID=gene1404;Dbxref=GeneID:3797936;Name=insA;Note=SDY1430;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1430
NC_007606.1	RefSeq	CDS	1319000	1319275	.	-	0	ID=cds1263;Parent=gene1404;Dbxref=Genbank:YP_403064.1,GeneID:3797936;Name=YP_403064.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403064.1;transl_table=11
NC_007606.1	RefSeq	region	1319743	1320510	.	+	.	ID=id244;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1319801	1320073	.	+	.	ID=gene1405;Dbxref=GeneID:18263022;Name=SDY_1430a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1430a
NC_007606.1	RefSeq	CDS	1319801	1320073	.	+	0	ID=cds1264;Parent=gene1405;Dbxref=Genbank:YP_009000708.1,GeneID:18263022;Name=YP_009000708.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000708.1;transl_table=11
NC_007606.1	RefSeq	gene	1320100	1320495	.	+	.	ID=gene1406;Dbxref=GeneID:3796022;Name=SDY_1431;Note=SDY1431;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1431
NC_007606.1	RefSeq	CDS	1320100	1320495	.	+	0	ID=cds1265;Parent=gene1406;Dbxref=Genbank:YP_403065.1,GeneID:3796022;Name=YP_403065.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403065.1;transl_table=11
NC_007606.1	RefSeq	gene	1321016	1321171	.	+	.	ID=gene1407;Dbxref=GeneID:3796023;Name=relF;Note=SDY1432;gbkey=Gene;gene=relF;gene_biotype=protein_coding;locus_tag=SDY_1432
NC_007606.1	RefSeq	CDS	1321016	1321171	.	+	0	ID=cds1266;Parent=gene1407;Dbxref=Genbank:YP_403066.1,GeneID:3796023;Name=YP_403066.1;gbkey=CDS;gene=relF;product=polypeptide destructive to membrane potential;protein_id=YP_403066.1;transl_table=11
NC_007606.1	RefSeq	gene	1321388	1321639	.	+	.	ID=gene1408;Dbxref=GeneID:3796024;Name=rem;Note=SDY1433;gbkey=Gene;gene=rem;gene_biotype=protein_coding;locus_tag=SDY_1433
NC_007606.1	RefSeq	CDS	1321388	1321639	.	+	0	ID=cds1267;Parent=gene1408;Dbxref=Genbank:YP_403067.1,GeneID:3796024;Name=YP_403067.1;gbkey=CDS;gene=rem;product=hypothetical protein;protein_id=YP_403067.1;transl_table=11
NC_007606.1	RefSeq	gene	1321986	1323035	.	+	.	ID=gene1409;Dbxref=GeneID:3796025;Name=SDY_1434;Note=SDY1434;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1434
NC_007606.1	RefSeq	CDS	1321986	1323035	.	+	0	ID=cds1268;Parent=gene1409;Dbxref=Genbank:YP_403068.1,GeneID:3796025;Name=YP_403068.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403068.1;transl_table=11
NC_007606.1	RefSeq	gene	1323048	1323422	.	+	.	ID=gene1410;Dbxref=GeneID:3796026;Name=SDY_1435;Note=SDY1435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1435
NC_007606.1	RefSeq	CDS	1323048	1323422	.	+	0	ID=cds1269;Parent=gene1410;Dbxref=Genbank:YP_403069.1,GeneID:3796026;Name=YP_403069.1;Note=Code: L%3B COG: COG4570;gbkey=CDS;product=endonuclease of prophage CP-933O;protein_id=YP_403069.1;transl_table=11
NC_007606.1	RefSeq	gene	1323419	1324240	.	+	.	ID=gene1411;Dbxref=GeneID:3796027;Name=SDY_1436;Note=SDY1436;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1436
NC_007606.1	RefSeq	CDS	1323419	1324240	.	+	0	ID=cds1270;Parent=gene1411;Dbxref=Genbank:YP_403070.1,GeneID:3796027;Name=YP_403070.1;gbkey=CDS;product=antitermination protein Q;protein_id=YP_403070.1;transl_table=11
NC_007606.1	RefSeq	gene	1324384	1324459	.	+	.	ID=gene1412;Dbxref=GeneID:3796028;Name=SDY_1437;Note=SDY1437;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1437
NC_007606.1	RefSeq	tRNA	1324384	1324459	.	+	.	ID=rna31;Parent=gene1412;Dbxref=GeneID:3796028;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	exon	1324384	1324459	.	+	.	ID=id245;Parent=rna31;Dbxref=GeneID:3796028;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	gene	1324558	1324634	.	+	.	ID=gene1413;Dbxref=GeneID:3796029;Name=SDY_1438;Note=SDY1438;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1438
NC_007606.1	RefSeq	tRNA	1324558	1324634	.	+	.	ID=rna32;Parent=gene1413;Dbxref=GeneID:3796029;codons=46;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	exon	1324558	1324634	.	+	.	ID=id246;Parent=rna32;Dbxref=GeneID:3796029;codons=46;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	region	1324671	1325438	.	+	.	ID=id247;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1324726	1325001	.	+	.	ID=gene1414;Dbxref=GeneID:3796030;Name=insA;Note=SDY1439;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1439
NC_007606.1	RefSeq	CDS	1324726	1325001	.	+	0	ID=cds1271;Parent=gene1414;Dbxref=Genbank:YP_403071.1,GeneID:3796030;Name=YP_403071.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403071.1;transl_table=11
NC_007606.1	RefSeq	gene	1325046	1325423	.	+	.	ID=gene1415;Dbxref=GeneID:3796031;Name=insB;Note=SDY1440;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1440
NC_007606.1	RefSeq	CDS	1325046	1325423	.	+	0	ID=cds1272;Parent=gene1415;Dbxref=Genbank:YP_403072.1,GeneID:3796031;Name=YP_403072.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403072.1;transl_table=11
NC_007606.1	RefSeq	region	1325857	1326622	.	+	.	ID=id248;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1325914	1326186	.	+	.	ID=gene1416;Dbxref=GeneID:18263023;Name=SDY_1440a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1440a
NC_007606.1	RefSeq	CDS	1325914	1326186	.	+	0	ID=cds1273;Parent=gene1416;Dbxref=Genbank:YP_009000709.1,GeneID:18263023;Name=YP_009000709.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000709.1;transl_table=11
NC_007606.1	RefSeq	gene	1326213	1326608	.	+	.	ID=gene1417;Dbxref=GeneID:3796033;Name=SDY_1442;Note=SDY1442;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1442
NC_007606.1	RefSeq	CDS	1326213	1326608	.	+	0	ID=cds1274;Parent=gene1417;Dbxref=Genbank:YP_403074.1,GeneID:3796033;Name=YP_403074.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403074.1;transl_table=11
NC_007606.1	RefSeq	gene	1326609	1326815	.	+	.	ID=gene1418;Dbxref=GeneID:3796034;Name=SDY_1443;Note=SDY1443;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1443
NC_007606.1	RefSeq	CDS	1326609	1326815	.	+	0	ID=cds1275;Parent=gene1418;Dbxref=Genbank:YP_403075.1,GeneID:3796034;Name=YP_403075.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403075.1;transl_table=11
NC_007606.1	RefSeq	region	1326921	1328184	.	+	.	ID=id249;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1326985	1327287	.	+	.	ID=gene1419;Dbxref=GeneID:3796035;Name=SDY_1444;Note=SDY1444;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1444
NC_007606.1	RefSeq	CDS	1326985	1327287	.	+	0	ID=cds1276;Parent=gene1419;Dbxref=Genbank:YP_403076.1,GeneID:3796035;Name=YP_403076.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403076.1;transl_table=11
NC_007606.1	RefSeq	gene	1327428	1328256	.	+	.	ID=gene1420;Dbxref=GeneID:3796036;Name=SDY_1445;Note=SDY1445;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1445;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1328521	1329286	.	-	.	ID=id250;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1328535	1328930	.	-	.	ID=gene1421;Dbxref=GeneID:3796037;Name=SDY_1446;Note=SDY1446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1446
NC_007606.1	RefSeq	CDS	1328535	1328930	.	-	0	ID=cds1277;Parent=gene1421;Dbxref=Genbank:YP_403078.1,GeneID:3796037;Name=YP_403078.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403078.1;transl_table=11
NC_007606.1	RefSeq	gene	1328957	1329229	.	-	.	ID=gene1422;Dbxref=GeneID:18263024;Name=SDY_1466a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1466a
NC_007606.1	RefSeq	CDS	1328957	1329229	.	-	0	ID=cds1278;Parent=gene1422;Dbxref=Genbank:YP_009000710.1,GeneID:18263024;Name=YP_009000710.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000710.1;transl_table=11
NC_007606.1	RefSeq	gene	1329300	1329542	.	+	.	ID=gene1423;Dbxref=GeneID:3796039;Name=SDY_1448;Note=SDY1448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1448
NC_007606.1	RefSeq	CDS	1329300	1329542	.	+	0	ID=cds1279;Parent=gene1423;Dbxref=Genbank:YP_403080.1,GeneID:3796039;Name=YP_403080.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403080.1;transl_table=11
NC_007606.1	RefSeq	region	1329809	1331139	.	+	.	ID=id251;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1329900	1330265	.	+	.	ID=gene1424;Dbxref=GeneID:3799402;Name=SDY_1449;Note=SDY1449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1449
NC_007606.1	RefSeq	CDS	1329900	1330265	.	+	0	ID=cds1280;Parent=gene1424;Dbxref=Genbank:YP_403081.1,GeneID:3799402;Name=YP_403081.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_403081.1;transl_table=11
NC_007606.1	RefSeq	gene	1330223	1331128	.	+	.	ID=gene1425;Dbxref=GeneID:3799403;Name=SDY_1450;Note=SDY1450;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1450
NC_007606.1	RefSeq	CDS	1330223	1331128	.	+	0	ID=cds1281;Parent=gene1425;Dbxref=Genbank:YP_403082.2,GeneID:3799403;Name=YP_403082.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_403082.2;transl_table=11
NC_007606.1	RefSeq	gene	1331147	1331362	.	+	.	ID=gene1426;Dbxref=GeneID:18263025;Name=SDY_1450a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1450a
NC_007606.1	RefSeq	CDS	1331147	1331362	.	+	0	ID=cds1282;Parent=gene1426;Dbxref=Genbank:YP_009000711.1,GeneID:18263025;Name=YP_009000711.1;gbkey=CDS;product=phage lysis protein;protein_id=YP_009000711.1;transl_table=11
NC_007606.1	RefSeq	gene	1331367	1331552	.	+	.	ID=gene1427;Dbxref=GeneID:18263026;Name=SDY_1451a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1451a
NC_007606.1	RefSeq	CDS	1331367	1331552	.	+	0	ID=cds1283;Parent=gene1427;Dbxref=Genbank:YP_009000712.1,GeneID:18263026;Name=YP_009000712.1;gbkey=CDS;product=prophage protein;protein_id=YP_009000712.1;transl_table=11
NC_007606.1	RefSeq	gene	1331439	1332306	.	-	.	ID=gene1428;Dbxref=GeneID:3799404;Name=SDY_1451;Note=SDY1451;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1451;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1331550	1332813	.	-	.	ID=id252;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1332447	1332749	.	-	.	ID=gene1429;Dbxref=GeneID:3799405;Name=SDY_1452;Note=SDY1452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1452
NC_007606.1	RefSeq	CDS	1332447	1332749	.	-	0	ID=cds1284;Parent=gene1429;Dbxref=Genbank:YP_403084.1,GeneID:3799405;Name=YP_403084.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403084.1;transl_table=11
NC_007606.1	RefSeq	gene	1333234	1333796	.	+	.	ID=gene1430;Dbxref=GeneID:3799406;Name=SDY_1453;Note=SDY1453;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1453;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1333997	1334854	.	-	.	ID=gene1431;Dbxref=GeneID:3799407;Name=sitD;Note=SDY1454;gbkey=Gene;gene=sitD;gene_biotype=protein_coding;locus_tag=SDY_1454
NC_007606.1	RefSeq	CDS	1333997	1334854	.	-	0	ID=cds1285;Parent=gene1431;Dbxref=Genbank:YP_403086.1,GeneID:3799407;Name=YP_403086.1;Note=Code: P%3B COG: COG1108;gbkey=CDS;gene=sitD;product=iron ABC transporter permease;protein_id=YP_403086.1;transl_table=11
NC_007606.1	RefSeq	gene	1334851	1335708	.	-	.	ID=gene1432;Dbxref=GeneID:3799408;Name=sitC;Note=SDY1455;gbkey=Gene;gene=sitC;gene_biotype=protein_coding;locus_tag=SDY_1455
NC_007606.1	RefSeq	CDS	1334851	1335708	.	-	0	ID=cds1286;Parent=gene1432;Dbxref=Genbank:YP_403087.1,GeneID:3799408;Name=YP_403087.1;Note=Code: P%3B COG: COG1108;gbkey=CDS;gene=sitC;product=iron ABC transporter permease;protein_id=YP_403087.1;transl_table=11
NC_007606.1	RefSeq	gene	1335705	1336532	.	-	.	ID=gene1433;Dbxref=GeneID:3799409;Name=sitB;Note=SDY1456;gbkey=Gene;gene=sitB;gene_biotype=protein_coding;locus_tag=SDY_1456
NC_007606.1	RefSeq	CDS	1335705	1336532	.	-	0	ID=cds1287;Parent=gene1433;Dbxref=Genbank:YP_403088.1,GeneID:3799409;Name=YP_403088.1;Note=Code: P%3B COG: COG1121;gbkey=CDS;gene=sitB;product=iron ABC transporter ATP-binding protein;protein_id=YP_403088.1;transl_table=11
NC_007606.1	RefSeq	gene	1336532	1337446	.	-	.	ID=gene1434;Dbxref=GeneID:3799410;Name=sitA;Note=SDY1457;gbkey=Gene;gene=sitA;gene_biotype=protein_coding;locus_tag=SDY_1457
NC_007606.1	RefSeq	CDS	1336532	1337446	.	-	0	ID=cds1288;Parent=gene1434;Dbxref=Genbank:YP_403089.1,GeneID:3799410;Name=YP_403089.1;Note=Code: P%3B COG: COG0803;gbkey=CDS;gene=sitA;product=iron ABC transporter substrate-binding protein;protein_id=YP_403089.1;transl_table=11
NC_007606.1	RefSeq	gene	1338033	1338539	.	-	.	ID=gene1435;Dbxref=GeneID:3799411;Name=ynaF;Note=SDY1458;gbkey=Gene;gene=ynaF;gene_biotype=protein_coding;locus_tag=SDY_1458
NC_007606.1	RefSeq	CDS	1338033	1338539	.	-	0	ID=cds1289;Parent=gene1435;Dbxref=Genbank:YP_403090.1,GeneID:3799411;Name=YP_403090.1;Note=Code: T%3B COG: COG0589;gbkey=CDS;gene=ynaF;product=filament protein;protein_id=YP_403090.1;transl_table=11
NC_007606.1	RefSeq	gene	1338608	1339742	.	-	.	ID=gene1436;Dbxref=GeneID:3799412;Name=ompN;Note=SDY1459%3B frameshift%3B original product: porin OmpN;gbkey=Gene;gene=ompN;gene_biotype=pseudogene;locus_tag=SDY_1459;pseudo=true
NC_007606.1	RefSeq	region	1339940	1341192	.	-	.	ID=id253;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1339983	1340696	.	-	.	ID=gene1437;Dbxref=GeneID:3799413;Name=SDY_1460;Note=SDY1460;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1460
NC_007606.1	RefSeq	CDS	1339983	1340696	.	-	0	ID=cds1290;Parent=gene1437;Dbxref=Genbank:YP_403091.1,GeneID:3799413;Name=YP_403091.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_403091.1;transl_table=11
NC_007606.1	RefSeq	gene	1341364	1344888	.	-	.	ID=gene1438;Dbxref=GeneID:3799414;Name=ydbK;Note=SDY1461;gbkey=Gene;gene=ydbK;gene_biotype=protein_coding;locus_tag=SDY_1461
NC_007606.1	RefSeq	CDS	1341364	1344888	.	-	0	ID=cds1291;Parent=gene1438;Dbxref=Genbank:YP_403092.1,GeneID:3799414;Name=YP_403092.1;Note=Code: C%3B COG: COG0674;gbkey=CDS;gene=ydbK;product=oxidoreductase Fe-S subunit;protein_id=YP_403092.1;transl_table=11
NC_007606.1	RefSeq	gene	1345150	1345416	.	+	.	ID=gene1439;Dbxref=GeneID:3799415;Name=SDY_1462;Note=SDY1462;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1462
NC_007606.1	RefSeq	CDS	1345150	1345416	.	+	0	ID=cds1292;Parent=gene1439;Dbxref=Genbank:YP_403093.1,GeneID:3799415;Name=YP_403093.1;Note=Code: R%3B COG: COG3042;gbkey=CDS;product=hypothetical protein;protein_id=YP_403093.1;transl_table=11
NC_007606.1	RefSeq	gene	1345413	1345824	.	-	.	ID=gene1440;Dbxref=GeneID:3799416;Name=hslJ;Note=SDY1463%3B frameshift%3B original product: heat shock protein hslJ;gbkey=Gene;gene=hslJ;gene_biotype=pseudogene;locus_tag=SDY_1463;pseudo=true
NC_007606.1	RefSeq	gene	1345935	1346924	.	-	.	ID=gene1441;Dbxref=GeneID:3799417;Name=ldhA;Note=SDY1464;gbkey=Gene;gene=ldhA;gene_biotype=protein_coding;locus_tag=SDY_1464
NC_007606.1	RefSeq	CDS	1345935	1346924	.	-	0	ID=cds1293;Parent=gene1441;Dbxref=Genbank:YP_403094.1,GeneID:3799417;Name=YP_403094.1;Note=Code: CHR%3B COG: COG1052;gbkey=CDS;gene=ldhA;product=fermentative D-lactate dehydrogenase;protein_id=YP_403094.1;transl_table=11
NC_007606.1	RefSeq	gene	1347132	1349771	.	+	.	ID=gene1442;Dbxref=GeneID:3799418;Name=ydbH;Note=SDY1465;gbkey=Gene;gene=ydbH;gene_biotype=protein_coding;locus_tag=SDY_1465
NC_007606.1	RefSeq	CDS	1347132	1349771	.	+	0	ID=cds1294;Parent=gene1442;Dbxref=Genbank:YP_403095.1,GeneID:3799418;Name=YP_403095.1;gbkey=CDS;gene=ydbH;product=hypothetical protein;protein_id=YP_403095.1;transl_table=11
NC_007606.1	RefSeq	gene	1349768	1349953	.	+	.	ID=gene1443;Dbxref=GeneID:3799419;Name=ynbE;Note=SDY1466;gbkey=Gene;gene=ynbE;gene_biotype=protein_coding;locus_tag=SDY_1466
NC_007606.1	RefSeq	CDS	1349768	1349953	.	+	0	ID=cds1295;Parent=gene1443;Dbxref=Genbank:YP_403096.1,GeneID:3799419;Name=YP_403096.1;gbkey=CDS;gene=ynbE;product=hypothetical protein;protein_id=YP_403096.1;transl_table=11
NC_007606.1	RefSeq	region	1350188	1350954	.	+	.	ID=id254;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1350245	1350517	.	+	.	ID=gene1444;Dbxref=GeneID:18263027;Name=SDY_1468a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1468a
NC_007606.1	RefSeq	CDS	1350245	1350517	.	+	0	ID=cds1296;Parent=gene1444;Dbxref=Genbank:YP_009000713.1,GeneID:18263027;Name=YP_009000713.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000713.1;transl_table=11
NC_007606.1	RefSeq	gene	1350544	1350939	.	+	.	ID=gene1445;Dbxref=GeneID:3797988;Name=SDY_1468;Note=SDY1468;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1468
NC_007606.1	RefSeq	CDS	1350544	1350939	.	+	0	ID=cds1297;Parent=gene1445;Dbxref=Genbank:YP_403098.1,GeneID:3797988;Name=YP_403098.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403098.1;transl_table=11
NC_007606.1	RefSeq	region	1351112	1351879	.	+	.	ID=id255;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1351167	1351442	.	+	.	ID=gene1446;Dbxref=GeneID:3797989;Name=insA;Note=SDY1469;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1469
NC_007606.1	RefSeq	CDS	1351167	1351442	.	+	0	ID=cds1298;Parent=gene1446;Dbxref=Genbank:YP_403099.1,GeneID:3797989;Name=YP_403099.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403099.1;transl_table=11
NC_007606.1	RefSeq	gene	1351487	1351864	.	+	.	ID=gene1447;Dbxref=GeneID:3797990;Name=insB;Note=SDY1470;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1470
NC_007606.1	RefSeq	CDS	1351487	1351864	.	+	0	ID=cds1299;Parent=gene1447;Dbxref=Genbank:YP_403100.1,GeneID:3797990;Name=YP_403100.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403100.1;transl_table=11
NC_007606.1	RefSeq	gene	1352005	1352562	.	+	.	ID=gene1448;Dbxref=GeneID:3797991;Name=SDY_1471;Note=SDY1471;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1471
NC_007606.1	RefSeq	CDS	1352005	1352562	.	+	0	ID=cds1300;Parent=gene1448;Dbxref=Genbank:YP_403101.1,GeneID:3797991;Name=YP_403101.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403101.1;transl_table=11
NC_007606.1	RefSeq	gene	1352732	1353346	.	+	.	ID=gene1449;Dbxref=GeneID:3797992;Name=SDY_1472;Note=SDY1472;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1472
NC_007606.1	RefSeq	CDS	1352732	1353346	.	+	0	ID=cds1301;Parent=gene1449;Dbxref=Genbank:YP_403102.1,GeneID:3797992;Name=YP_403102.1;Note=Code: I%3B COG: COG0558;gbkey=CDS;product=hypothetical protein;protein_id=YP_403102.1;transl_table=11
NC_007606.1	RefSeq	region	1353307	1354072	.	-	.	ID=id256;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1353321	1353716	.	-	.	ID=gene1450;Dbxref=GeneID:3797993;Name=SDY_1473;Note=SDY1473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1473
NC_007606.1	RefSeq	CDS	1353321	1353716	.	-	0	ID=cds1302;Parent=gene1450;Dbxref=Genbank:YP_403103.1,GeneID:3797993;Name=YP_403103.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403103.1;transl_table=11
NC_007606.1	RefSeq	gene	1353743	1354015	.	-	.	ID=gene1451;Dbxref=GeneID:18263028;Name=SDY_1469a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1469a
NC_007606.1	RefSeq	CDS	1353743	1354015	.	-	0	ID=cds1303;Parent=gene1451;Dbxref=Genbank:YP_009000714.1,GeneID:18263028;Name=YP_009000714.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000714.1;transl_table=11
NC_007606.1	RefSeq	gene	1354383	1355141	.	-	.	ID=gene1452;Dbxref=GeneID:3797994;Name=aroD;Note=SDY1474;gbkey=Gene;gene=aroD;gene_biotype=protein_coding;locus_tag=SDY_1474
NC_007606.1	RefSeq	CDS	1354383	1355141	.	-	0	ID=cds1304;Parent=gene1452;Dbxref=Genbank:YP_403104.1,GeneID:3797994;Name=YP_403104.1;Note=catalyzes the dehydration of 3-dehydroquinate to form 3-dehydroshikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroD;product=3-dehydroquinate dehydratase;protein_id=YP_403104.1;transl_table=11
NC_007606.1	RefSeq	gene	1355172	1356065	.	-	.	ID=gene1453;Dbxref=GeneID:3797995;Name=ydiB;Note=SDY1475;gbkey=Gene;gene=ydiB;gene_biotype=protein_coding;locus_tag=SDY_1475
NC_007606.1	RefSeq	CDS	1355172	1356065	.	-	0	ID=cds1305;Parent=gene1453;Dbxref=Genbank:YP_403105.1,GeneID:3797995;Name=YP_403105.1;Note=YdiB%3B quinate/shikimate dehydrogenase from Escherichia coli uses both NAD and NAD(P) to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate;gbkey=CDS;gene=ydiB;product=quinate/shikimate dehydrogenase;protein_id=YP_403105.1;transl_table=11
NC_007606.1	RefSeq	region	1356029	1356794	.	-	.	ID=id257;gbkey=mobile_element;gene=ydiB
NC_007606.1	RefSeq	gene	1356043	1356258	.	-	.	ID=gene1454;Dbxref=GeneID:3797996;Name=SDY_1476;Note=SDY1476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1476
NC_007606.1	RefSeq	CDS	1356043	1356258	.	-	0	ID=cds1306;Parent=gene1454;Dbxref=Genbank:YP_403106.1,GeneID:3797996;Name=YP_403106.1;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403106.1;transl_table=11
NC_007606.1	RefSeq	gene	1356464	1356736	.	-	.	ID=gene1455;Dbxref=GeneID:18263029;Name=SDY_1476a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1476a
NC_007606.1	RefSeq	CDS	1356464	1356736	.	-	0	ID=cds1307;Parent=gene1455;Dbxref=Genbank:YP_009000715.1,GeneID:18263029;Name=YP_009000715.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000715.1;transl_table=11
NC_007606.1	RefSeq	gene	1356823	1357176	.	-	.	ID=gene1456;Dbxref=GeneID:3797997;Name=SDY_1477;Note=SDY1477;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1477
NC_007606.1	RefSeq	CDS	1356823	1357176	.	-	0	ID=cds1308;Parent=gene1456;Dbxref=Genbank:YP_403107.1,GeneID:3797997;Name=YP_403107.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403107.1;transl_table=11
NC_007606.1	RefSeq	region	1357258	1357997	.	-	.	ID=id258;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1357273	1357650	.	-	.	ID=gene1457;Dbxref=GeneID:3797998;Name=insB;Note=SDY1478;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1478
NC_007606.1	RefSeq	CDS	1357273	1357650	.	-	0	ID=cds1309;Parent=gene1457;Dbxref=Genbank:YP_403108.1,GeneID:3797998;Name=YP_403108.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403108.1;transl_table=11
NC_007606.1	RefSeq	gene	1357695	1357970	.	-	.	ID=gene1458;Dbxref=GeneID:3797999;Name=insA;Note=SDY1479;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1479
NC_007606.1	RefSeq	CDS	1357695	1357970	.	-	0	ID=cds1310;Parent=gene1458;Dbxref=Genbank:YP_403109.1,GeneID:3797999;Name=YP_403109.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403109.1;transl_table=11
NC_007606.1	RefSeq	gene	1357992	1358754	.	-	.	ID=gene1459;Dbxref=GeneID:3798000;Name=SDY_1480;Note=SDY1480;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1480;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1357998	1359236	.	-	.	ID=id259;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1358895	1359197	.	-	.	ID=gene1460;Dbxref=GeneID:3798001;Name=SDY_1481;Note=SDY1481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1481
NC_007606.1	RefSeq	CDS	1358895	1359197	.	-	0	ID=cds1311;Parent=gene1460;Dbxref=Genbank:YP_403111.1,GeneID:3798001;Name=YP_403111.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403111.1;transl_table=11
NC_007606.1	RefSeq	region	1359236	1360003	.	+	.	ID=id260;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1359291	1359566	.	+	.	ID=gene1461;Dbxref=GeneID:3798002;Name=insA;Note=SDY1482;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1482
NC_007606.1	RefSeq	CDS	1359291	1359566	.	+	0	ID=cds1312;Parent=gene1461;Dbxref=Genbank:YP_403112.1,GeneID:3798002;Name=YP_403112.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403112.1;transl_table=11
NC_007606.1	RefSeq	gene	1359923	1360801	.	-	.	ID=gene1462;Dbxref=GeneID:3798003;Name=SDY_1483;Note=SDY1483;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1483
NC_007606.1	RefSeq	CDS	1359923	1360801	.	-	0	ID=cds1313;Parent=gene1462;Dbxref=Genbank:YP_403113.1,GeneID:3798003;Name=YP_403113.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;product=transport system permease;protein_id=YP_403113.1;transl_table=11
NC_007606.1	RefSeq	region	1360765	1361537	.	-	.	ID=id261;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1360779	1361174	.	-	.	ID=gene1463;Dbxref=GeneID:3798004;Name=SDY_1484;Note=SDY1484;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1484
NC_007606.1	RefSeq	CDS	1360779	1361174	.	-	0	ID=cds1314;Parent=gene1463;Dbxref=Genbank:YP_403114.1,GeneID:3798004;Name=YP_403114.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403114.1;transl_table=11
NC_007606.1	RefSeq	gene	1361201	1361473	.	-	.	ID=gene1464;Dbxref=GeneID:18263030;Name=SDY_1482a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1482a
NC_007606.1	RefSeq	CDS	1361201	1361473	.	-	0	ID=cds1315;Parent=gene1464;Dbxref=Genbank:YP_009000716.1,GeneID:18263030;Name=YP_009000716.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000716.1;transl_table=11
NC_007606.1	RefSeq	gene	1361643	1362389	.	+	.	ID=gene1465;Dbxref=GeneID:3798005;Name=yeaF;Note=SDY1485;gbkey=Gene;gene=yeaF;gene_biotype=protein_coding;locus_tag=SDY_1485
NC_007606.1	RefSeq	CDS	1361643	1362389	.	+	0	ID=cds1316;Parent=gene1465;Dbxref=Genbank:YP_403115.1,GeneID:3798005;Name=YP_403115.1;Note=Code: M%3B COG: COG3713;gbkey=CDS;gene=yeaF;product=hypothetical protein;protein_id=YP_403115.1;transl_table=11
NC_007606.1	RefSeq	gene	1362479	1363330	.	+	.	ID=gene1466;Dbxref=GeneID:3798006;Name=SDY_1486;Note=SDY1486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1486
NC_007606.1	RefSeq	CDS	1362479	1363330	.	+	0	ID=cds1317;Parent=gene1466;Dbxref=Genbank:YP_403116.1,GeneID:3798006;Name=YP_403116.1;Note=Code: R%3B COG: COG0656;gbkey=CDS;product=aldehyde reductase;protein_id=YP_403116.1;transl_table=11
NC_007606.1	RefSeq	gene	1363381	1364286	.	-	.	ID=gene1467;Dbxref=GeneID:3798007;Name=yeaD;Note=SDY1487;gbkey=Gene;gene=yeaD;gene_biotype=protein_coding;locus_tag=SDY_1487
NC_007606.1	RefSeq	CDS	1363381	1364286	.	-	0	ID=cds1318;Parent=gene1467;Dbxref=Genbank:YP_403117.1,GeneID:3798007;Name=YP_403117.1;Note=Code: G%3B COG: COG0676;gbkey=CDS;gene=yeaD;product=hypothetical protein;protein_id=YP_403117.1;transl_table=11
NC_007606.1	RefSeq	gene	1364349	1365344	.	-	.	ID=gene1468;Dbxref=GeneID:3797500;Name=gapA;Note=SDY1488;gbkey=Gene;gene=gapA;gene_biotype=protein_coding;locus_tag=SDY_1488
NC_007606.1	RefSeq	CDS	1364349	1365344	.	-	0	ID=cds1319;Parent=gene1468;Dbxref=Genbank:YP_403118.1,GeneID:3797500;Name=YP_403118.1;Note=Code: G%3B COG: COG0057;gbkey=CDS;gene=gapA;product=glyceraldehyde-3-phosphate dehydrogenase;protein_id=YP_403118.1;transl_table=11
NC_007606.1	RefSeq	gene	1365686	1366099	.	+	.	ID=gene1469;Dbxref=GeneID:3797501;Name=yeaA;Note=SDY1489;gbkey=Gene;gene=yeaA;gene_biotype=protein_coding;locus_tag=SDY_1489
NC_007606.1	RefSeq	CDS	1365686	1366099	.	+	0	ID=cds1320;Parent=gene1469;Dbxref=Genbank:YP_403119.1,GeneID:3797501;Name=YP_403119.1;Note=this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form%3B provides protection against oxidative stress;gbkey=CDS;gene=yeaA;product=methionine sulfoxide reductase B;protein_id=YP_403119.1;transl_table=11
NC_007606.1	RefSeq	gene	1366096	1366413	.	+	.	ID=gene1470;Dbxref=GeneID:3797502;Name=SDY_1490;Note=SDY1490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1490
NC_007606.1	RefSeq	CDS	1366096	1366413	.	+	0	ID=cds1321;Parent=gene1470;Dbxref=Genbank:YP_403120.1,GeneID:3797502;Name=YP_403120.1;Note=Code: S%3B COG: COG3139;gbkey=CDS;product=hypothetical protein;protein_id=YP_403120.1;transl_table=11
NC_007606.1	RefSeq	gene	1366782	1367858	.	+	.	ID=gene1471;Dbxref=GeneID:3797503;Name=SDY_1491;Note=SDY1491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1491
NC_007606.1	RefSeq	CDS	1366782	1367858	.	+	0	ID=cds1322;Parent=gene1471;Dbxref=Genbank:YP_403121.1,GeneID:3797503;Name=YP_403121.1;Note=Code: ER%3B COG: COG1063;gbkey=CDS;product=oxidoreductase;protein_id=YP_403121.1;transl_table=11
NC_007606.1	RefSeq	gene	1367885	1369264	.	+	.	ID=gene1472;Dbxref=GeneID:3797504;Name=SDY_1492;Note=SDY1492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1492
NC_007606.1	RefSeq	CDS	1367885	1369264	.	+	0	ID=cds1323;Parent=gene1472;Dbxref=Genbank:YP_403122.1,GeneID:3797504;Name=YP_403122.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;product=transport protein;protein_id=YP_403122.1;transl_table=11
NC_007606.1	RefSeq	gene	1369320	1370327	.	+	.	ID=gene1473;Dbxref=GeneID:3797505;Name=ydjJ;Note=SDY1493;gbkey=Gene;gene=ydjJ;gene_biotype=protein_coding;locus_tag=SDY_1493
NC_007606.1	RefSeq	CDS	1369320	1370327	.	+	0	ID=cds1324;Parent=gene1473;Dbxref=Genbank:YP_403123.1,GeneID:3797505;Name=YP_403123.1;Note=Code: ER%3B COG: COG1063;gbkey=CDS;gene=ydjJ;product=oxidoreductase;protein_id=YP_403123.1;transl_table=11
NC_007606.1	RefSeq	region	1370247	1371014	.	-	.	ID=id262;gbkey=mobile_element;gene=ydjJ
NC_007606.1	RefSeq	gene	1370684	1370959	.	-	.	ID=gene1474;Dbxref=GeneID:3797506;Name=insA;Note=SDY1494;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1494
NC_007606.1	RefSeq	CDS	1370684	1370959	.	-	0	ID=cds1325;Parent=gene1474;Dbxref=Genbank:YP_403124.1,GeneID:3797506;Name=YP_403124.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403124.1;transl_table=11
NC_007606.1	RefSeq	gene	1371015	1371659	.	+	.	ID=gene1475;Dbxref=GeneID:3797507;Name=SDY_1495;Note=SDY1495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1495
NC_007606.1	RefSeq	CDS	1371015	1371659	.	+	0	ID=cds1326;Parent=gene1475;Dbxref=Genbank:YP_403125.1,GeneID:3797507;Name=YP_403125.1;Note=Code: G%3B COG: COG0524;gbkey=CDS;product=kinase;protein_id=YP_403125.1;transl_table=11
NC_007606.1	RefSeq	gene	1371669	1372650	.	+	.	ID=gene1476;Dbxref=GeneID:3797508;Name=SDY_1496;Note=SDY1496;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1496;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1372787	1373545	.	+	.	ID=gene1477;Dbxref=GeneID:3797510;Name=SDY_1498;Note=SDY1498;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1498
NC_007606.1	RefSeq	CDS	1372787	1373545	.	+	0	ID=cds1327;Parent=gene1477;Dbxref=Genbank:YP_403128.1,GeneID:3797510;Name=YP_403128.1;Note=Code: KG%3B COG: COG1349;gbkey=CDS;product=DeoR-type transcriptional regulator;protein_id=YP_403128.1;transl_table=11
NC_007606.1	RefSeq	gene	1373662	1374261	.	+	.	ID=gene1478;Dbxref=GeneID:3797511;Name=ydjE;Note=SDY1499%3B truncated%3B original product:  transport protein;gbkey=Gene;gene=ydjE;gene_biotype=pseudogene;locus_tag=SDY_1499;pseudo=true
NC_007606.1	RefSeq	region	1374246	1374984	.	+	.	ID=id263;Note=fragment;gbkey=mobile_element;gene=ydjE
NC_007606.1	RefSeq	gene	1374314	1374586	.	+	.	ID=gene1479;Dbxref=GeneID:18263031;Name=SDY_1500a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1500a
NC_007606.1	RefSeq	CDS	1374314	1374586	.	+	0	ID=cds1328;Parent=gene1479;Dbxref=Genbank:YP_009000717.1,GeneID:18263031;Name=YP_009000717.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000717.1;transl_table=11
NC_007606.1	RefSeq	region	1374985	1375752	.	+	.	ID=id264;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1375040	1375315	.	+	.	ID=gene1480;Dbxref=GeneID:3797513;Name=insA;Note=SDY1501;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1501
NC_007606.1	RefSeq	CDS	1375040	1375315	.	+	0	ID=cds1329;Parent=gene1480;Dbxref=Genbank:YP_403130.1,GeneID:3797513;Name=YP_403130.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403130.1;transl_table=11
NC_007606.1	RefSeq	gene	1375360	1375737	.	+	.	ID=gene1481;Dbxref=GeneID:3797514;Name=insB;Note=SDY1502;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1502
NC_007606.1	RefSeq	CDS	1375360	1375737	.	+	0	ID=cds1330;Parent=gene1481;Dbxref=Genbank:YP_403131.1,GeneID:3797514;Name=YP_403131.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403131.1;transl_table=11
NC_007606.1	RefSeq	region	1375946	1376711	.	-	.	ID=id265;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1375960	1376355	.	-	.	ID=gene1482;Dbxref=GeneID:3797515;Name=SDY_1503;Note=SDY1503;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1503
NC_007606.1	RefSeq	CDS	1375960	1376355	.	-	0	ID=cds1331;Parent=gene1482;Dbxref=Genbank:YP_403132.1,GeneID:3797515;Name=YP_403132.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403132.1;transl_table=11
NC_007606.1	RefSeq	gene	1376382	1376654	.	-	.	ID=gene1483;Dbxref=GeneID:18263032;Name=SDY_1503a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1503a
NC_007606.1	RefSeq	CDS	1376382	1376654	.	-	0	ID=cds1332;Parent=gene1483;Dbxref=Genbank:YP_009000718.1,GeneID:18263032;Name=YP_009000718.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000718.1;transl_table=11
NC_007606.1	RefSeq	gene	1377057	1377698	.	-	.	ID=gene1484;Dbxref=GeneID:3797517;Name=ydjB;Note=SDY1505;gbkey=Gene;gene=ydjB;gene_biotype=protein_coding;locus_tag=SDY_1505
NC_007606.1	RefSeq	CDS	1377057	1377698	.	-	0	ID=cds1333;Parent=gene1484;Dbxref=Genbank:YP_403134.2,GeneID:3797517;Name=YP_403134.2;Note=catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide;gbkey=CDS;gene=ydjB;product=nicotinamidase/pyrazinamidase;protein_id=YP_403134.2;transl_table=11
NC_007606.1	RefSeq	gene	1377709	1378725	.	-	.	ID=gene1485;Dbxref=GeneID:3797518;Name=ansA;Note=SDY1506;gbkey=Gene;gene=ansA;gene_biotype=protein_coding;locus_tag=SDY_1506
NC_007606.1	RefSeq	CDS	1377709	1378725	.	-	0	ID=cds1334;Parent=gene1485;Dbxref=Genbank:YP_403135.1,GeneID:3797518;Name=YP_403135.1;Note=converts asparagine to aspartate and ammonia;gbkey=CDS;gene=ansA;product=asparaginase;protein_id=YP_403135.1;transl_table=11
NC_007606.1	RefSeq	gene	1378879	1380735	.	-	.	ID=gene1486;Dbxref=GeneID:3799324;Name=sppA;Note=SDY1507;gbkey=Gene;gene=sppA;gene_biotype=protein_coding;locus_tag=SDY_1507
NC_007606.1	RefSeq	CDS	1378879	1380735	.	-	0	ID=cds1335;Parent=gene1486;Dbxref=Genbank:YP_403136.1,GeneID:3799324;Name=YP_403136.1;Note=SppA%3B catalyzes the degradation of cleaved signal peptides%3B essential to maintain secretion of mature proteins across the membrane;gbkey=CDS;gene=sppA;product=protease 4;protein_id=YP_403136.1;transl_table=11
NC_007606.1	RefSeq	gene	1380896	1381447	.	+	.	ID=gene1487;Dbxref=GeneID:3799325;Name=ydjA;Note=SDY1508;gbkey=Gene;gene=ydjA;gene_biotype=protein_coding;locus_tag=SDY_1508
NC_007606.1	RefSeq	CDS	1380896	1381447	.	+	0	ID=cds1336;Parent=gene1487;Dbxref=Genbank:YP_403137.1,GeneID:3799325;Name=YP_403137.1;Note=Code: C%3B COG: COG0778;gbkey=CDS;gene=ydjA;product=hypothetical protein;protein_id=YP_403137.1;transl_table=11
NC_007606.1	RefSeq	gene	1381564	1382607	.	+	.	ID=gene1488;Dbxref=GeneID:3799326;Name=selD;Note=SDY1509;gbkey=Gene;gene=selD;gene_biotype=protein_coding;locus_tag=SDY_1509
NC_007606.1	RefSeq	CDS	1381564	1382607	.	+	0	ID=cds1337;Parent=gene1488;Dbxref=Genbank:YP_403138.1,GeneID:3799326;Name=YP_403138.1;Note=catalyzes the formation of selenophosphate from selenide and ATP;gbkey=CDS;gene=selD;product=selenophosphate synthetase;protein_id=YP_403138.1;transl_table=11
NC_007606.1	RefSeq	gene	1382612	1384573	.	+	.	ID=gene1489;Dbxref=GeneID:3799327;Name=topB;Note=SDY1510;gbkey=Gene;gene=topB;gene_biotype=protein_coding;locus_tag=SDY_1510
NC_007606.1	RefSeq	CDS	1382612	1384573	.	+	0	ID=cds1338;Parent=gene1489;Dbxref=Genbank:YP_403139.1,GeneID:3799327;Name=YP_403139.1;Note=decatenates replicating daughter chromosomes;gbkey=CDS;gene=topB;product=DNA topoisomerase III;protein_id=YP_403139.1;transl_table=11
NC_007606.1	RefSeq	region	1384747	1385336	.	+	.	ID=id266;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1384804	1385076	.	+	.	ID=gene1490;Dbxref=GeneID:18263033;Name=SDY_1512a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1512a
NC_007606.1	RefSeq	CDS	1384804	1385076	.	+	0	ID=cds1339;Parent=gene1490;Dbxref=Genbank:YP_009000719.1,GeneID:18263033;Name=YP_009000719.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000719.1;transl_table=11
NC_007606.1	RefSeq	region	1385337	1386102	.	-	.	ID=id267;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1385351	1385746	.	-	.	ID=gene1491;Dbxref=GeneID:3799329;Name=SDY_1512;Note=SDY1512;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1512
NC_007606.1	RefSeq	CDS	1385351	1385746	.	-	0	ID=cds1340;Parent=gene1491;Dbxref=Genbank:YP_403141.1,GeneID:3799329;Name=YP_403141.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403141.1;transl_table=11
NC_007606.1	RefSeq	gene	1385773	1386045	.	-	.	ID=gene1492;Dbxref=GeneID:18263034;Name=SDY_1513a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1513a
NC_007606.1	RefSeq	CDS	1385773	1386045	.	-	0	ID=cds1341;Parent=gene1492;Dbxref=Genbank:YP_009000720.1,GeneID:18263034;Name=YP_009000720.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000720.1;transl_table=11
NC_007606.1	RefSeq	region	1386103	1386286	.	+	.	ID=id268;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1386335	1387288	.	+	.	ID=gene1493;Dbxref=GeneID:3799330;Name=SDY_1513;Note=SDY1513;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1513
NC_007606.1	RefSeq	CDS	1386335	1387288	.	+	0	ID=cds1342;Parent=gene1493;Dbxref=Genbank:YP_403142.2,GeneID:3799330;Name=YP_403142.2;gbkey=CDS;product=hypothetical protein;protein_id=YP_403142.2;transl_table=11
NC_007606.1	RefSeq	gene	1387405	1388748	.	-	.	ID=gene1494;Dbxref=GeneID:3799331;Name=gdhA;Note=SDY1514;gbkey=Gene;gene=gdhA;gene_biotype=protein_coding;locus_tag=SDY_1514
NC_007606.1	RefSeq	CDS	1387405	1388748	.	-	0	ID=cds1343;Parent=gene1494;Dbxref=Genbank:YP_403143.1,GeneID:3799331;Name=YP_403143.1;Note=converts 2-oxoglutarate to glutamate%3B in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction%3B uses NADPH%3B forms a homohexamer;gbkey=CDS;gene=gdhA;product=glutamate dehydrogenase;protein_id=YP_403143.1;transl_table=11
NC_007606.1	RefSeq	gene	1388984	1389256	.	+	.	ID=gene1495;Dbxref=GeneID:3799332;Name=SDY_1515;Note=SDY1515;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1515
NC_007606.1	RefSeq	CDS	1388984	1389256	.	+	0	ID=cds1344;Parent=gene1495;Dbxref=Genbank:YP_403144.1,GeneID:3799332;Name=YP_403144.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403144.1;transl_table=11
NC_007606.1	RefSeq	gene	1389222	1389629	.	-	.	ID=gene1496;Dbxref=GeneID:3799333;Name=SDY_1516;Note=SDY1516;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1516
NC_007606.1	RefSeq	CDS	1389222	1389629	.	-	0	ID=cds1345;Parent=gene1496;Dbxref=Genbank:YP_403145.1,GeneID:3799333;Name=YP_403145.1;Note=Code: LR%3B COG: COG0494;gbkey=CDS;product=pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase;protein_id=YP_403145.1;transl_table=11
NC_007606.1	RefSeq	gene	1389716	1390335	.	+	.	ID=gene1497;Dbxref=GeneID:3799334;Name=SDY_1517;Note=SDY1517;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1517;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1390344	1391666	.	-	.	ID=gene1498;Dbxref=GeneID:3799335;Name=SDY_1518;Note=SDY1518%3B contains in-frame stop codon%3B original product:  thiosulfate sulfur transferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1518;pseudo=true
NC_007606.1	RefSeq	gene	1391718	1392371	.	-	.	ID=gene1499;Dbxref=GeneID:3799336;Name=SDY_1519;Note=SDY1519;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1519
NC_007606.1	RefSeq	CDS	1391718	1392371	.	-	0	ID=cds1346;Parent=gene1499;Dbxref=Genbank:YP_403147.1,GeneID:3799336;Name=YP_403147.1;Note=Code: R%3B COG: COG4136;gbkey=CDS;product=ATPase;protein_id=YP_403147.1;transl_table=11
NC_007606.1	RefSeq	gene	1392371	1393907	.	-	.	ID=gene1500;Dbxref=GeneID:3799337;Name=SDY_1520;Note=SDY1520;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1520;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1393880	1395046	.	-	.	ID=gene1501;Dbxref=GeneID:3799338;Name=SDY_1521;Note=SDY1521;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1521;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1395056	1395604	.	-	.	ID=gene1502;Dbxref=GeneID:3799340;Name=ynjA;Note=SDY1523;gbkey=Gene;gene=ynjA;gene_biotype=protein_coding;locus_tag=SDY_1523
NC_007606.1	RefSeq	CDS	1395056	1395604	.	-	0	ID=cds1347;Parent=gene1502;Dbxref=Genbank:YP_403151.1,GeneID:3799340;Name=YP_403151.1;Note=Code: S%3B COG: COG2128;gbkey=CDS;gene=ynjA;product=hypothetical protein;protein_id=YP_403151.1;transl_table=11
NC_007606.1	RefSeq	gene	1395604	1396311	.	-	.	ID=gene1503;Dbxref=GeneID:3799341;Name=ydjZ;Note=SDY1524;gbkey=Gene;gene=ydjZ;gene_biotype=protein_coding;locus_tag=SDY_1524
NC_007606.1	RefSeq	CDS	1395604	1396311	.	-	0	ID=cds1348;Parent=gene1503;Dbxref=Genbank:YP_403152.1,GeneID:3799341;Name=YP_403152.1;Note=Code: S%3B COG: COG0398;gbkey=CDS;gene=ydjZ;product=hypothetical protein;protein_id=YP_403152.1;transl_table=11
NC_007606.1	RefSeq	gene	1396326	1397003	.	-	.	ID=gene1504;Dbxref=GeneID:3799342;Name=ydjY;Note=SDY1525;gbkey=Gene;gene=ydjY;gene_biotype=protein_coding;locus_tag=SDY_1525
NC_007606.1	RefSeq	CDS	1396326	1397003	.	-	0	ID=cds1349;Parent=gene1504;Dbxref=Genbank:YP_403153.1,GeneID:3799342;Name=YP_403153.1;gbkey=CDS;gene=ydjY;product=hypothetical protein;protein_id=YP_403153.1;transl_table=11
NC_007606.1	RefSeq	gene	1397008	1397571	.	-	.	ID=gene1505;Dbxref=GeneID:3799343;Name=ydjX;Note=SDY1526;gbkey=Gene;gene=ydjX;gene_biotype=protein_coding;locus_tag=SDY_1526
NC_007606.1	RefSeq	CDS	1397008	1397571	.	-	0	ID=cds1350;Parent=gene1505;Dbxref=Genbank:YP_403154.1,GeneID:3799343;Name=YP_403154.1;Note=Code: S%3B COG: COG0398;gbkey=CDS;gene=ydjX;product=hypothetical protein;protein_id=YP_403154.1;transl_table=11
NC_007606.1	RefSeq	gene	1397738	1398544	.	-	.	ID=gene1506;Dbxref=GeneID:3799016;Name=xthA;Note=SDY1527;gbkey=Gene;gene=xthA;gene_biotype=protein_coding;locus_tag=SDY_1527
NC_007606.1	RefSeq	CDS	1397738	1398544	.	-	0	ID=cds1351;Parent=gene1506;Dbxref=Genbank:YP_403155.1,GeneID:3799016;Name=YP_403155.1;Note=removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction;gbkey=CDS;gene=xthA;product=exonuclease III;protein_id=YP_403155.1;transl_table=11
NC_007606.1	RefSeq	gene	1398990	1399970	.	+	.	ID=gene1507;Dbxref=GeneID:3799017;Name=cstC;Note=SDY1528%3B IS1 insertion%3B original product: acetylornithine delta-aminotransferase;gbkey=Gene;gene=cstC;gene_biotype=pseudogene;locus_tag=SDY_1528;pseudo=true
NC_007606.1	RefSeq	region	1399966	1400732	.	-	.	ID=id269;gbkey=mobile_element;gene=cstC
NC_007606.1	RefSeq	gene	1400378	1400677	.	-	.	ID=gene1508;Dbxref=GeneID:3799018;Name=insA;Note=SDY1529;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1529
NC_007606.1	RefSeq	CDS	1400378	1400677	.	-	0	ID=cds1352;Parent=gene1508;Dbxref=Genbank:YP_403156.1,GeneID:3799018;Name=YP_403156.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_403156.1;transl_table=11
NC_007606.1	RefSeq	gene	1400983	1402017	.	+	.	ID=gene1509;Dbxref=GeneID:3799019;Name=SDY_1530;Note=SDY1530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1530
NC_007606.1	RefSeq	CDS	1400983	1402017	.	+	0	ID=cds1353;Parent=gene1509;Dbxref=Genbank:YP_403157.1,GeneID:3799019;Name=YP_403157.1;Note=Code: E%3B COG: COG3138;gbkey=CDS;product=arginine succinyltransferase;protein_id=YP_403157.1;transl_table=11
NC_007606.1	RefSeq	gene	1402014	1403015	.	+	.	ID=gene1510;Dbxref=GeneID:3799020;Name=SDY_1531;Note=SDY1531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1531
NC_007606.1	RefSeq	CDS	1402014	1403015	.	+	0	ID=cds1354;Parent=gene1510;Dbxref=Genbank:YP_403158.1,GeneID:3799020;Name=YP_403158.1;Note=Code: C%3B COG: COG1012;gbkey=CDS;product=aldehyde dehydrogenase;protein_id=YP_403158.1;transl_table=11
NC_007606.1	RefSeq	gene	1403484	1404830	.	+	.	ID=gene1511;Dbxref=GeneID:3799021;Name=SDY_1532;Note=SDY1532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1532
NC_007606.1	RefSeq	CDS	1403484	1404830	.	+	0	ID=cds1355;Parent=gene1511;Dbxref=Genbank:YP_403159.2,GeneID:3799021;Name=YP_403159.2;Note=''catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine%2C ammonia and carbon dioxide in arginine degradation'';gbkey=CDS;product=succinylarginine dihydrolase;protein_id=YP_403159.2;transl_table=11
NC_007606.1	RefSeq	gene	1404823	1405780	.	+	.	ID=gene1512;Dbxref=GeneID:3799022;Name=ydjS;Note=SDY1533;gbkey=Gene;gene=ydjS;gene_biotype=pseudogene;locus_tag=SDY_1533;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1406110	1406595	.	+	.	ID=gene1513;Dbxref=GeneID:3799023;Name=spy;Note=SDY1534;gbkey=Gene;gene=spy;gene_biotype=protein_coding;locus_tag=SDY_1534
NC_007606.1	RefSeq	CDS	1406110	1406595	.	+	0	ID=cds1356;Parent=gene1513;Dbxref=Genbank:YP_403161.1,GeneID:3799023;Name=YP_403161.1;Note=periplasmic protein induced by stress response via Cpx and BaeSR system%3B similar to CpxP;gbkey=CDS;gene=spy;product=hypothetical protein;protein_id=YP_403161.1;transl_table=11
NC_007606.1	RefSeq	gene	1406798	1407073	.	+	.	ID=gene1514;Dbxref=GeneID:3799024;Name=SDY_1535;Note=SDY1535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1535
NC_007606.1	RefSeq	CDS	1406798	1407073	.	+	0	ID=cds1357;Parent=gene1514;Dbxref=Genbank:YP_403162.1,GeneID:3799024;Name=YP_403162.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403162.1;transl_table=11
NC_007606.1	RefSeq	region	1407034	1407799	.	-	.	ID=id270;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1407470	1407742	.	-	.	ID=gene1515;Dbxref=GeneID:18263035;Name=SDY_1537a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1537a
NC_007606.1	RefSeq	CDS	1407470	1407742	.	-	0	ID=cds1358;Parent=gene1515;Dbxref=Genbank:YP_009000721.1,GeneID:18263035;Name=YP_009000721.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000721.1;transl_table=11
NC_007606.1	RefSeq	gene	1408108	1408974	.	-	.	ID=gene1516;Dbxref=GeneID:3799028;Name=SDY_1539;Note=SDY1539;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1539
NC_007606.1	RefSeq	CDS	1408108	1408974	.	-	0	ID=cds1359;Parent=gene1516;Dbxref=Genbank:YP_403166.1,GeneID:3799028;Name=YP_403166.1;Note=3' incision activity%3B acts with UvrC;gbkey=CDS;product=nucleotide excision repair endonuclease;protein_id=YP_403166.1;transl_table=11
NC_007606.1	RefSeq	gene	1409204	1410031	.	-	.	ID=gene1517;Dbxref=GeneID:3799029;Name=nadE;Note=SDY1540;gbkey=Gene;gene=nadE;gene_biotype=protein_coding;locus_tag=SDY_1540
NC_007606.1	RefSeq	CDS	1409204	1410031	.	-	0	ID=cds1360;Parent=gene1517;Dbxref=Genbank:YP_403167.1,GeneID:3799029;Name=YP_403167.1;Note=catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP%3B ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one%3B forms homodimers;gbkey=CDS;gene=nadE;product=NAD synthetase;protein_id=YP_403167.1;transl_table=11
NC_007606.1	RefSeq	gene	1410233	1410571	.	+	.	ID=gene1518;Dbxref=GeneID:3799030;Name=osmE;Note=SDY1541;gbkey=Gene;gene=osmE;gene_biotype=protein_coding;locus_tag=SDY_1541
NC_007606.1	RefSeq	CDS	1410233	1410571	.	+	0	ID=cds1361;Parent=gene1518;Dbxref=Genbank:YP_403168.1,GeneID:3799030;Name=YP_403168.1;Note=osmotically-inducible lipoprotein E%3B activator of ntr-like gene protein;gbkey=CDS;gene=osmE;product=DNA-binding transcriptional activator OsmE;protein_id=YP_403168.1;transl_table=11
NC_007606.1	RefSeq	region	1410743	1411510	.	+	.	ID=id271;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1410800	1411072	.	+	.	ID=gene1519;Dbxref=GeneID:18263036;Name=SDY_1541a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1541a
NC_007606.1	RefSeq	CDS	1410800	1411072	.	+	0	ID=cds1362;Parent=gene1519;Dbxref=Genbank:YP_009000722.1,GeneID:18263036;Name=YP_009000722.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000722.1;transl_table=11
NC_007606.1	RefSeq	gene	1411099	1411494	.	+	.	ID=gene1520;Dbxref=GeneID:3799031;Name=SDY_1542;Note=SDY1542;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1542
NC_007606.1	RefSeq	CDS	1411099	1411494	.	+	0	ID=cds1363;Parent=gene1520;Dbxref=Genbank:YP_403169.1,GeneID:3799031;Name=YP_403169.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403169.1;transl_table=11
NC_007606.1	RefSeq	gene	1411737	1413128	.	-	.	ID=gene1521;Dbxref=GeneID:3799032;Name=SDY_1543;Note=SDY1543;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1543;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1413223	1413990	.	+	.	ID=id272;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1413278	1413553	.	+	.	ID=gene1522;Dbxref=GeneID:3799033;Name=insA;Note=SDY1544;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1544
NC_007606.1	RefSeq	CDS	1413278	1413553	.	+	0	ID=cds1364;Parent=gene1522;Dbxref=Genbank:YP_403171.1,GeneID:3799033;Name=YP_403171.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403171.1;transl_table=11
NC_007606.1	RefSeq	gene	1413598	1413975	.	+	.	ID=gene1523;Dbxref=GeneID:3799034;Name=insB;Note=SDY1545;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1545
NC_007606.1	RefSeq	CDS	1413598	1413975	.	+	0	ID=cds1365;Parent=gene1523;Dbxref=Genbank:YP_403172.1,GeneID:3799034;Name=YP_403172.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403172.1;transl_table=11
NC_007606.1	RefSeq	gene	1414088	1414423	.	+	.	ID=gene1524;Dbxref=GeneID:3796423;Name=ydgC;Note=SDY1546;gbkey=Gene;gene=ydgC;gene_biotype=protein_coding;locus_tag=SDY_1546
NC_007606.1	RefSeq	CDS	1414088	1414423	.	+	0	ID=cds1366;Parent=gene1524;Dbxref=Genbank:YP_403173.1,GeneID:3796423;Name=YP_403173.1;Note=Code: R%3B COG: COG3136;gbkey=CDS;gene=ydgC;product=hypothetical protein;protein_id=YP_403173.1;transl_table=11
NC_007606.1	RefSeq	gene	1414420	1415142	.	-	.	ID=gene1525;Dbxref=GeneID:3796424;Name=ydgB;Note=SDY1547;gbkey=Gene;gene=ydgB;gene_biotype=protein_coding;locus_tag=SDY_1547
NC_007606.1	RefSeq	CDS	1414420	1415142	.	-	0	ID=cds1367;Parent=gene1525;Dbxref=Genbank:YP_403174.1,GeneID:3796424;Name=YP_403174.1;Note=Code: IQR%3B COG: COG1028;gbkey=CDS;gene=ydgB;product=short chain dehydrogenase;protein_id=YP_403174.1;transl_table=11
NC_007606.1	RefSeq	gene	1415179	1416561	.	-	.	ID=gene1526;Dbxref=GeneID:3796425;Name=SDY_1548;Note=SDY1548;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1548
NC_007606.1	RefSeq	CDS	1415179	1416561	.	-	0	ID=cds1368;Parent=gene1526;Dbxref=Genbank:YP_403175.1,GeneID:3796425;Name=YP_403175.1;Note=Code: E%3B COG: COG0531;gbkey=CDS;product=arginine/ornithine antiporter;protein_id=YP_403175.1;transl_table=11
NC_007606.1	RefSeq	gene	1416747	1417691	.	-	.	ID=gene1527;Dbxref=GeneID:3796426;Name=SDY_1549;Note=SDY1549;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1549
NC_007606.1	RefSeq	CDS	1416747	1417691	.	-	0	ID=cds1369;Parent=gene1527;Dbxref=Genbank:YP_403176.1,GeneID:3796426;Name=YP_403176.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403176.1;transl_table=11
NC_007606.1	RefSeq	gene	1418215	1419747	.	+	.	ID=gene1528;Dbxref=GeneID:3796427;Name=pntA;Note=SDY1550;gbkey=Gene;gene=pntA;gene_biotype=protein_coding;locus_tag=SDY_1550
NC_007606.1	RefSeq	CDS	1418215	1419747	.	+	0	ID=cds1370;Parent=gene1528;Dbxref=Genbank:YP_403177.1,GeneID:3796427;Name=YP_403177.1;Note=forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane%3B involved in catalyzing transfer of hydride ion equivalents between NAD and NADP%3B stereospecific (AB-specific)%3B functions as a proton pump by translocating protons from cytoplasm to periplasm;gbkey=CDS;gene=pntA;product=NAD(P) transhydrogenase subunit alpha;protein_id=YP_403177.1;transl_table=11
NC_007606.1	RefSeq	gene	1419758	1421146	.	+	.	ID=gene1529;Dbxref=GeneID:3796428;Name=pntB;Note=SDY1551;gbkey=Gene;gene=pntB;gene_biotype=protein_coding;locus_tag=SDY_1551
NC_007606.1	RefSeq	CDS	1419758	1421146	.	+	0	ID=cds1371;Parent=gene1529;Dbxref=Genbank:YP_403178.1,GeneID:3796428;Name=YP_403178.1;Note=catalyzes reversible transfer of hydride ion equivalent between NAD and NADP%3B membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane%3B forms a tetramer composed of two alpha and 2 beta subunits%3B AB-stereospecific enzyme;gbkey=CDS;gene=pntB;product=pyridine nucleotide transhydrogenase;protein_id=YP_403178.1;transl_table=11
NC_007606.1	RefSeq	gene	1421171	1422205	.	-	.	ID=gene1530;Dbxref=GeneID:3796429;Name=tqsA;Note=SDY1552;gbkey=Gene;gene=tqsA;gene_biotype=protein_coding;gene_synonym=ydgG;locus_tag=SDY_1552
NC_007606.1	RefSeq	CDS	1421171	1422205	.	-	0	ID=cds1372;Parent=gene1530;Dbxref=Genbank:YP_403179.1,GeneID:3796429;Name=YP_403179.1;Note=transport of quorum-sensing signal%3B mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes;gbkey=CDS;gene=tqsA;product=transport protein;protein_id=YP_403179.1;transl_table=11
NC_007606.1	RefSeq	gene	1422617	1422982	.	+	.	ID=gene1531;Dbxref=GeneID:3796430;Name=SDY_1553;Note=SDY1553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1553
NC_007606.1	RefSeq	CDS	1422617	1422982	.	+	0	ID=cds1373;Parent=gene1531;Dbxref=Genbank:YP_403180.1,GeneID:3796430;Name=YP_403180.1;Note=''with MdtI is involved in resistance to deoxycholate %2C nalidixic acid%2C fosfomycin%2C and SDS'';gbkey=CDS;product=multidrug efflux system protein MdtJ;protein_id=YP_403180.1;transl_table=11
NC_007606.1	RefSeq	gene	1422969	1423298	.	+	.	ID=gene1532;Dbxref=GeneID:3796431;Name=SDY_1554;Note=SDY1554;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1554
NC_007606.1	RefSeq	CDS	1422969	1423298	.	+	0	ID=cds1374;Parent=gene1532;Dbxref=Genbank:YP_403181.1,GeneID:3796431;Name=YP_403181.1;Note=''with MdtJ is involved in resistance to deoxycholate%2C nalidixic acid%2C fosfomycin%2C and SDS'';gbkey=CDS;product=multidrug efflux system protein MdtI;protein_id=YP_403181.1;transl_table=11
NC_007606.1	RefSeq	gene	1423337	1424158	.	-	.	ID=gene1533;Dbxref=GeneID:3796432;Name=SDY_1555;Note=SDY1555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1555
NC_007606.1	RefSeq	CDS	1423337	1424158	.	-	0	ID=cds1375;Parent=gene1533;Dbxref=Genbank:YP_403182.1,GeneID:3796432;Name=YP_403182.1;Note=Code: E%3B COG: COG3591;gbkey=CDS;product=hypothetical protein;protein_id=YP_403182.1;transl_table=11
NC_007606.1	RefSeq	gene	1424434	1424742	.	-	.	ID=gene1534;Dbxref=GeneID:3796433;Name=asr;Note=SDY1556;gbkey=Gene;gene=asr;gene_biotype=protein_coding;locus_tag=SDY_1556
NC_007606.1	RefSeq	CDS	1424434	1424742	.	-	0	ID=cds1376;Parent=gene1534;Dbxref=Genbank:YP_403183.2,GeneID:3796433;Name=YP_403183.2;Note=required for growth and survival under moderately acid conditions;gbkey=CDS;gene=asr;product=acid shock protein;protein_id=YP_403183.2;transl_table=11
NC_007606.1	RefSeq	region	1425072	1425838	.	+	.	ID=id273;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1425129	1425401	.	+	.	ID=gene1535;Dbxref=GeneID:18263037;Name=SDY_1556a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1556a
NC_007606.1	RefSeq	CDS	1425129	1425401	.	+	0	ID=cds1377;Parent=gene1535;Dbxref=Genbank:YP_009000723.1,GeneID:18263037;Name=YP_009000723.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000723.1;transl_table=11
NC_007606.1	RefSeq	gene	1425941	1427192	.	-	.	ID=gene1536;Dbxref=GeneID:3796436;Name=ynfM;Note=SDY1559;gbkey=Gene;gene=ynfM;gene_biotype=pseudogene;locus_tag=SDY_1559;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1427251	1428018	.	+	.	ID=id274;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1427626	1428003	.	+	.	ID=gene1537;Dbxref=GeneID:3796437;Name=insB;Note=SDY1560;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1560
NC_007606.1	RefSeq	CDS	1427626	1428003	.	+	0	ID=cds1378;Parent=gene1537;Dbxref=Genbank:YP_403187.1,GeneID:3796437;Name=YP_403187.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403187.1;transl_table=11
NC_007606.1	RefSeq	gene	1428076	1428969	.	+	.	ID=gene1538;Dbxref=GeneID:3796438;Name=ynfL;Note=SDY1561;gbkey=Gene;gene=ynfL;gene_biotype=protein_coding;locus_tag=SDY_1561
NC_007606.1	RefSeq	CDS	1428076	1428969	.	+	0	ID=cds1379;Parent=gene1538;Dbxref=Genbank:YP_403188.1,GeneID:3796438;Name=YP_403188.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=ynfL;product=LysR family transcriptional regulator;protein_id=YP_403188.1;transl_table=11
NC_007606.1	RefSeq	gene	1429104	1430324	.	+	.	ID=gene1539;Dbxref=GeneID:3796439;Name=mlc;Note=SDY1562;gbkey=Gene;gene=mlc;gene_biotype=protein_coding;locus_tag=SDY_1562
NC_007606.1	RefSeq	CDS	1429104	1430324	.	+	0	ID=cds1380;Parent=gene1539;Dbxref=Genbank:YP_403189.1,GeneID:3796439;Name=YP_403189.1;Note=Code: KG%3B COG: COG1940;gbkey=CDS;gene=mlc;product=NAGC-like transcriptional regulator;protein_id=YP_403189.1;transl_table=11
NC_007606.1	RefSeq	gene	1430449	1431144	.	+	.	ID=gene1540;Dbxref=GeneID:3796440;Name=SDY_1563;Note=SDY1563;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1563
NC_007606.1	RefSeq	CDS	1430449	1431144	.	+	0	ID=cds1381;Parent=gene1540;Dbxref=Genbank:YP_403190.2,GeneID:3796440;Name=YP_403190.2;Note=''DTB synthetase%3B dethiobiotin synthase%3B involved in production of dethiobiotin from ATP and 7%2C8-diaminononanoate and carbon dioxide%3B contains magnesium'';gbkey=CDS;product=dithiobiotin synthetase;protein_id=YP_403190.2;transl_table=11
NC_007606.1	RefSeq	gene	1431097	1432434	.	-	.	ID=gene1541;Dbxref=GeneID:3796441;Name=SDY_1564;Note=SDY1564;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1564
NC_007606.1	RefSeq	CDS	1431097	1432434	.	-	0	ID=cds1382;Parent=gene1541;Dbxref=Genbank:YP_403191.1,GeneID:3796441;Name=YP_403191.1;Note=Code: P%3B COG: COG0038;gbkey=CDS;product=voltage-gated ClC-type chloride channel ClcB;protein_id=YP_403191.1;transl_table=11
NC_007606.1	RefSeq	gene	1432548	1433170	.	-	.	ID=gene1542;Dbxref=GeneID:3796442;Name=SDY_1565;Note=SDY1565%3B frameshift%3B original product:  oxidoreductase component;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1565;pseudo=true
NC_007606.1	RefSeq	gene	1433204	1434058	.	-	.	ID=gene1543;Dbxref=GeneID:3797106;Name=SDY_1566;Note=SDY1566;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1566
NC_007606.1	RefSeq	CDS	1433204	1434058	.	-	0	ID=cds1383;Parent=gene1543;Dbxref=Genbank:YP_403192.1,GeneID:3797106;Name=YP_403192.1;Note=Code: R%3B COG: COG3302;gbkey=CDS;product=DMSO reductase anchor subunit;protein_id=YP_403192.1;transl_table=11
NC_007606.1	RefSeq	gene	1434060	1434677	.	-	.	ID=gene1544;Dbxref=GeneID:3797107;Name=SDY_1567;Note=SDY1567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1567
NC_007606.1	RefSeq	CDS	1434060	1434677	.	-	0	ID=cds1384;Parent=gene1544;Dbxref=Genbank:YP_403193.1,GeneID:3797107;Name=YP_403193.1;Note=Code: C%3B COG: COG0437;gbkey=CDS;product=oxidoreductase Fe-S subunit;protein_id=YP_403193.1;transl_table=11
NC_007606.1	RefSeq	gene	1434688	1437114	.	-	.	ID=gene1545;Dbxref=GeneID:3797108;Name=SDY_1568;Note=''SDY1568%3B contains in-frame stop codon%3B original product:  oxidoreductase%2C major subunit'';gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1568;pseudo=true
NC_007606.1	RefSeq	gene	1437172	1439573	.	-	.	ID=gene1546;Dbxref=GeneID:3797109;Name=SDY_1569;Note=''SDY1569%3B contains in-frame stop codon%3B original product:  oxidoreductase%2C major subunit'';gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1569;pseudo=true
NC_007606.1	RefSeq	gene	1439771	1440118	.	-	.	ID=gene1547;Dbxref=GeneID:3797110;Name=SDY_1570;Note=SDY1570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1570
NC_007606.1	RefSeq	CDS	1439771	1440118	.	-	0	ID=cds1385;Parent=gene1547;Dbxref=Genbank:YP_403194.1,GeneID:3797110;Name=YP_403194.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403194.1;transl_table=11
NC_007606.1	RefSeq	gene	1440184	1440894	.	+	.	ID=gene1548;Dbxref=GeneID:3797111;Name=ynfC;Note=SDY1571;gbkey=Gene;gene=ynfC;gene_biotype=protein_coding;locus_tag=SDY_1571
NC_007606.1	RefSeq	CDS	1440184	1440894	.	+	0	ID=cds1386;Parent=gene1548;Dbxref=Genbank:YP_403195.2,GeneID:3797111;Name=YP_403195.2;gbkey=CDS;gene=ynfC;product=hypothetical protein;protein_id=YP_403195.2;transl_table=11
NC_007606.1	RefSeq	gene	1440894	1441106	.	+	.	ID=gene1549;Dbxref=GeneID:3797112;Name=SDY_1572;Note=SDY1572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1572
NC_007606.1	RefSeq	CDS	1440894	1441106	.	+	0	ID=cds1387;Parent=gene1549;Dbxref=Genbank:YP_403196.1,GeneID:3797112;Name=YP_403196.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403196.1;transl_table=11
NC_007606.1	RefSeq	region	1441085	1441850	.	+	.	ID=id275;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1441142	1441414	.	+	.	ID=gene1550;Dbxref=GeneID:18263038;Name=SDY_1572a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1572a
NC_007606.1	RefSeq	CDS	1441142	1441414	.	+	0	ID=cds1388;Parent=gene1550;Dbxref=Genbank:YP_009000724.1,GeneID:18263038;Name=YP_009000724.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000724.1;transl_table=11
NC_007606.1	RefSeq	gene	1441441	1441836	.	+	.	ID=gene1551;Dbxref=GeneID:3797114;Name=SDY_1574;Note=SDY1574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1574
NC_007606.1	RefSeq	CDS	1441441	1441836	.	+	0	ID=cds1389;Parent=gene1551;Dbxref=Genbank:YP_403198.1,GeneID:3797114;Name=YP_403198.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403198.1;transl_table=11
NC_007606.1	RefSeq	gene	1441833	1442231	.	-	.	ID=gene1552;Dbxref=GeneID:3797115;Name=speG;Note=SDY1575%3B truncated%3B original product: spermidine N1-acetyltransferase;gbkey=Gene;gene=speG;gene_biotype=pseudogene;locus_tag=SDY_1575;pseudo=true
NC_007606.1	RefSeq	gene	1442266	1442607	.	-	.	ID=gene1553;Dbxref=GeneID:3797116;Name=SDY_1576;Note=SDY1576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1576
NC_007606.1	RefSeq	CDS	1442266	1442607	.	-	0	ID=cds1390;Parent=gene1553;Dbxref=Genbank:YP_403199.1,GeneID:3797116;Name=YP_403199.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403199.1;transl_table=11
NC_007606.1	RefSeq	gene	1442742	1443068	.	+	.	ID=gene1554;Dbxref=GeneID:3797117;Name=SDY_1577;Note=SDY1577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1577
NC_007606.1	RefSeq	CDS	1442742	1443068	.	+	0	ID=cds1391;Parent=gene1554;Dbxref=Genbank:YP_403200.1,GeneID:3797117;Name=YP_403200.1;Note=Code: S%3B COG: COG1742;gbkey=CDS;product=hypothetical protein;protein_id=YP_403200.1;transl_table=11
NC_007606.1	RefSeq	gene	1443274	1444488	.	+	.	ID=gene1555;Dbxref=GeneID:3797118;Name=rspA;Note=SDY1578%3B contains in-frame stop codon%3B original product: starvation sensing protein;gbkey=Gene;gene=rspA;gene_biotype=pseudogene;locus_tag=SDY_1578;pseudo=true
NC_007606.1	RefSeq	gene	1444500	1446293	.	+	.	ID=gene1556;Dbxref=GeneID:3797119;Name=rspB;Note=SDY1579%3B contains iso-IS1 insertion%3B original product: starvation sensing protein;gbkey=Gene;gene=rspB;gene_biotype=pseudogene;locus_tag=SDY_1579;pseudo=true
NC_007606.1	RefSeq	region	1445200	1445965	.	-	.	ID=id276;gbkey=mobile_element;gene=rspB
NC_007606.1	RefSeq	gene	1445214	1445609	.	-	.	ID=gene1557;Dbxref=GeneID:3797120;Name=SDY_1580;Note=SDY1580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1580
NC_007606.1	RefSeq	CDS	1445214	1445609	.	-	0	ID=cds1392;Parent=gene1557;Dbxref=Genbank:YP_403201.1,GeneID:3797120;Name=YP_403201.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403201.1;transl_table=11
NC_007606.1	RefSeq	gene	1445636	1445908	.	-	.	ID=gene1558;Dbxref=GeneID:18263039;Name=SDY_1580a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1580a
NC_007606.1	RefSeq	CDS	1445636	1445908	.	-	0	ID=cds1393;Parent=gene1558;Dbxref=Genbank:YP_009000725.1,GeneID:18263039;Name=YP_009000725.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000725.1;transl_table=11
NC_007606.1	RefSeq	gene	1446435	1447718	.	+	.	ID=gene1559;Dbxref=GeneID:3797122;Name=SDY_1582;Note=SDY1582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1582
NC_007606.1	RefSeq	CDS	1446435	1447718	.	+	0	ID=cds1394;Parent=gene1559;Dbxref=Genbank:YP_403203.1,GeneID:3797122;Name=YP_403203.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;product=transport protein;protein_id=YP_403203.1;transl_table=11
NC_007606.1	RefSeq	gene	1447807	1449267	.	+	.	ID=gene1560;Dbxref=GeneID:3797123;Name=ydfI;Note=SDY1583%3B contains in-frame stop codon%3B original product:  oxidoreductase;gbkey=Gene;gene=ydfI;gene_biotype=pseudogene;locus_tag=SDY_1583;pseudo=true
NC_007606.1	RefSeq	gene	1449303	1449506	.	-	.	ID=gene1561;Dbxref=GeneID:3797124;Name=SDY_1584;Note=SDY1584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1584
NC_007606.1	RefSeq	CDS	1449303	1449506	.	-	0	ID=cds1395;Parent=gene1561;Dbxref=Genbank:YP_403204.1,GeneID:3797124;Name=YP_403204.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403204.1;transl_table=11
NC_007606.1	RefSeq	gene	1449683	1450369	.	-	.	ID=gene1562;Dbxref=GeneID:3796899;Name=ydfH;Note=SDY1585;gbkey=Gene;gene=ydfH;gene_biotype=protein_coding;locus_tag=SDY_1585
NC_007606.1	RefSeq	CDS	1449683	1450369	.	-	0	ID=cds1396;Parent=gene1562;Dbxref=Genbank:YP_403205.1,GeneID:3796899;Name=YP_403205.1;Note=Code: K%3B COG: COG1802;gbkey=CDS;gene=ydfH;product=hypothetical protein;protein_id=YP_403205.1;transl_table=11
NC_007606.1	RefSeq	gene	1450458	1451204	.	-	.	ID=gene1563;Dbxref=GeneID:3796900;Name=ydfG;Note=SDY1586;gbkey=Gene;gene=ydfG;gene_biotype=protein_coding;locus_tag=SDY_1586
NC_007606.1	RefSeq	CDS	1450458	1451204	.	-	0	ID=cds1397;Parent=gene1563;Dbxref=Genbank:YP_403206.1,GeneID:3796900;Name=YP_403206.1;Note=''NADP(+)-dependent%3B catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine%3B can also use 3-hydroxybutyrate%2C 3-hydroxy-isobutyrate%2C D-threonine%2C L-allo-threonine%2CD-serine'';gbkey=CDS;gene=ydfG;product=3-hydroxy acid dehydrogenase;protein_id=YP_403206.1;transl_table=11
NC_007606.1	RefSeq	gene	1451341	1453386	.	+	.	ID=gene1564;Dbxref=GeneID:3796901;Name=dcp;Note=SDY1587;gbkey=Gene;gene=dcp;gene_biotype=protein_coding;locus_tag=SDY_1587
NC_007606.1	RefSeq	CDS	1451341	1453386	.	+	0	ID=cds1398;Parent=gene1564;Dbxref=Genbank:YP_403207.1,GeneID:3796901;Name=YP_403207.1;Note=Code: E%3B COG: COG0339;gbkey=CDS;gene=dcp;product=dipeptidyl carboxypeptidase II;protein_id=YP_403207.1;transl_table=11
NC_007606.1	RefSeq	gene	1453431	1453949	.	-	.	ID=gene1565;Dbxref=GeneID:3796902;Name=ydeJ;Note=SDY1588;gbkey=Gene;gene=ydeJ;gene_biotype=protein_coding;locus_tag=SDY_1588
NC_007606.1	RefSeq	CDS	1453431	1453949	.	-	0	ID=cds1399;Parent=gene1565;Dbxref=Genbank:YP_403208.1,GeneID:3796902;Name=YP_403208.1;Note=Code: R%3B COG: COG1546;gbkey=CDS;gene=ydeJ;product=competence damage-inducible protein A;protein_id=YP_403208.1;transl_table=11
NC_007606.1	RefSeq	gene	1454225	1454617	.	+	.	ID=gene1566;Dbxref=GeneID:3796903;Name=ydeI;Note=SDY1589;gbkey=Gene;gene=ydeI;gene_biotype=protein_coding;locus_tag=SDY_1589
NC_007606.1	RefSeq	CDS	1454225	1454617	.	+	0	ID=cds1400;Parent=gene1566;Dbxref=Genbank:YP_403209.1,GeneID:3796903;Name=YP_403209.1;Note=Code: S%3B COG: COG3111;gbkey=CDS;gene=ydeI;product=hypothetical protein;protein_id=YP_403209.1;transl_table=11
NC_007606.1	RefSeq	gene	1454872	1455762	.	+	.	ID=gene1567;Dbxref=GeneID:3796904;Name=ydeH;Note=SDY1590;gbkey=Gene;gene=ydeH;gene_biotype=protein_coding;locus_tag=SDY_1590
NC_007606.1	RefSeq	CDS	1454872	1455762	.	+	0	ID=cds1401;Parent=gene1567;Dbxref=Genbank:YP_403210.1,GeneID:3796904;Name=YP_403210.1;Note=Code: T%3B COG: COG2199;gbkey=CDS;gene=ydeH;product=hypothetical protein;protein_id=YP_403210.1;transl_table=11
NC_007606.1	RefSeq	region	1456115	1456882	.	+	.	ID=id277;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1456170	1456445	.	+	.	ID=gene1568;Dbxref=GeneID:3796905;Name=insA;Note=SDY1591;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1591
NC_007606.1	RefSeq	CDS	1456170	1456445	.	+	0	ID=cds1402;Parent=gene1568;Dbxref=Genbank:YP_403211.1,GeneID:3796905;Name=YP_403211.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403211.1;transl_table=11
NC_007606.1	RefSeq	gene	1456490	1456867	.	+	.	ID=gene1569;Dbxref=GeneID:3796906;Name=insB;Note=SDY1592;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1592
NC_007606.1	RefSeq	CDS	1456490	1456867	.	+	0	ID=cds1403;Parent=gene1569;Dbxref=Genbank:YP_403212.1,GeneID:3796906;Name=YP_403212.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403212.1;transl_table=11
NC_007606.1	RefSeq	gene	1456979	1458166	.	-	.	ID=gene1570;Dbxref=GeneID:3796907;Name=ydeF;Note=SDY1593;gbkey=Gene;gene=ydeF;gene_biotype=protein_coding;locus_tag=SDY_1593
NC_007606.1	RefSeq	CDS	1456979	1458166	.	-	0	ID=cds1404;Parent=gene1570;Dbxref=Genbank:YP_403213.1,GeneID:3796907;Name=YP_403213.1;Note=YdeF%3B uncharacterized member of the major facilitator superfamily (MFS) of transporters;gbkey=CDS;gene=ydeF;product=MFS-type transporter YdeE;protein_id=YP_403213.1;transl_table=11
NC_007606.1	RefSeq	gene	1458361	1459260	.	+	.	ID=gene1571;Dbxref=GeneID:3796908;Name=ydeD;Note=SDY1594;gbkey=Gene;gene=ydeD;gene_biotype=protein_coding;locus_tag=SDY_1594
NC_007606.1	RefSeq	CDS	1458361	1459260	.	+	0	ID=cds1405;Parent=gene1571;Dbxref=Genbank:YP_403214.2,GeneID:3796908;Name=YP_403214.2;Note=Code: GER%3B COG: COG0697;gbkey=CDS;gene=ydeD;product=O-acetylserine/cysteine export protein;protein_id=YP_403214.2;transl_table=11
NC_007606.1	RefSeq	gene	1459291	1459508	.	-	.	ID=gene1572;Dbxref=GeneID:3796909;Name=marB;Note=SDY1595%3B frameshift%3B original product: multiple antibiotic resistance protein;gbkey=Gene;gene=marB;gene_biotype=pseudogene;locus_tag=SDY_1595;pseudo=true
NC_007606.1	RefSeq	gene	1459540	1459923	.	-	.	ID=gene1573;Dbxref=GeneID:3796910;Name=marA;Note=SDY1596;gbkey=Gene;gene=marA;gene_biotype=protein_coding;locus_tag=SDY_1596
NC_007606.1	RefSeq	CDS	1459540	1459923	.	-	0	ID=cds1406;Parent=gene1573;Dbxref=Genbank:YP_403215.2,GeneID:3796910;Name=YP_403215.2;Note=''transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype%3B also activates sodA%2C zwf and micF'';gbkey=CDS;gene=marA;product=DNA-binding transcriptional activator MarA;protein_id=YP_403215.2;transl_table=11
NC_007606.1	RefSeq	gene	1459943	1460377	.	-	.	ID=gene1574;Dbxref=GeneID:3796911;Name=marR;Note=SDY1597;gbkey=Gene;gene=marR;gene_biotype=protein_coding;locus_tag=SDY_1597
NC_007606.1	RefSeq	CDS	1459943	1460377	.	-	0	ID=cds1407;Parent=gene1574;Dbxref=Genbank:YP_403216.2,GeneID:3796911;Name=YP_403216.2;Note=Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes;gbkey=CDS;gene=marR;product=DNA-binding transcriptional repressor MarR;protein_id=YP_403216.2;transl_table=11
NC_007606.1	RefSeq	gene	1460589	1461254	.	+	.	ID=gene1575;Dbxref=GeneID:3796912;Name=ydeB;Note=SDY1598;gbkey=Gene;gene=ydeB;gene_biotype=protein_coding;locus_tag=SDY_1598
NC_007606.1	RefSeq	CDS	1460589	1461254	.	+	0	ID=cds1408;Parent=gene1575;Dbxref=Genbank:YP_403217.1,GeneID:3796912;Name=YP_403217.1;Note=''protein involved in resistance to different drugs (tetracycline%2C chloramphenicol%2C beta-lactams%2C and quinolones)%3B part of the multiple antibiotic resistance (mar) locus%2C which is composed by the genes marC and marRAB%3B unknown function'';gbkey=CDS;gene=ydeB;product=multiple drug resistance protein MarC;protein_id=YP_403217.1;transl_table=11
NC_007606.1	RefSeq	gene	1461279	1462337	.	-	.	ID=gene1576;Dbxref=GeneID:3796913;Name=ydeA;Note=SDY1599;gbkey=Gene;gene=ydeA;gene_biotype=protein_coding;locus_tag=SDY_1599
NC_007606.1	RefSeq	CDS	1461279	1462337	.	-	0	ID=cds1409;Parent=gene1576;Dbxref=Genbank:YP_403218.1,GeneID:3796913;Name=YP_403218.1;Note=Code: G%3B COG: COG2814;gbkey=CDS;gene=ydeA;product=sugar efflux transporter;protein_id=YP_403218.1;transl_table=11
NC_007606.1	RefSeq	region	1462462	1463227	.	+	.	ID=id278;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1462519	1462791	.	+	.	ID=gene1577;Dbxref=GeneID:18263040;Name=SDY_1599a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1599a
NC_007606.1	RefSeq	CDS	1462519	1462791	.	+	0	ID=cds1410;Parent=gene1577;Dbxref=Genbank:YP_009000726.1,GeneID:18263040;Name=YP_009000726.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000726.1;transl_table=11
NC_007606.1	RefSeq	gene	1462818	1463213	.	+	.	ID=gene1578;Dbxref=GeneID:3796915;Name=SDY_1601;Note=SDY1601;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1601
NC_007606.1	RefSeq	CDS	1462818	1463213	.	+	0	ID=cds1411;Parent=gene1578;Dbxref=Genbank:YP_403220.1,GeneID:3796915;Name=YP_403220.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403220.1;transl_table=11
NC_007606.1	RefSeq	gene	1463784	1464665	.	-	.	ID=gene1579;Dbxref=GeneID:3796917;Name=yddG;Note=SDY1603;gbkey=Gene;gene=yddG;gene_biotype=protein_coding;locus_tag=SDY_1603
NC_007606.1	RefSeq	CDS	1463784	1464665	.	-	0	ID=cds1412;Parent=gene1579;Dbxref=Genbank:YP_403222.1,GeneID:3796917;Name=YP_403222.1;Note=Code: GER%3B COG: COG0697;gbkey=CDS;gene=yddG;product=hypothetical protein;protein_id=YP_403222.1;transl_table=11
NC_007606.1	RefSeq	gene	1464897	1467956	.	+	.	ID=gene1580;Dbxref=GeneID:3796918;Name=fdnG;Note=''SDY1604%3B contains in-frame stop codon%3B original product: formate dehydrogenase-N%2C nitrate-inducible%2C alpha subunit'';gbkey=Gene;gene=fdnG;gene_biotype=pseudogene;locus_tag=SDY_1604;pseudo=true
NC_007606.1	RefSeq	gene	1467969	1468853	.	+	.	ID=gene1581;Dbxref=GeneID:3796578;Name=fdnH;Note=SDY1605;gbkey=Gene;gene=fdnH;gene_biotype=protein_coding;locus_tag=SDY_1605
NC_007606.1	RefSeq	CDS	1467969	1468853	.	+	0	ID=cds1413;Parent=gene1581;Dbxref=Genbank:YP_403223.1,GeneID:3796578;Name=YP_403223.1;Note=Code: C%3B COG: COG0437;gbkey=CDS;gene=fdnH;product=formate dehydrogenase-N%2C nitrate-inducible%2C iron-sulfur beta subunit;protein_id=YP_403223.1;transl_table=11
NC_007606.1	RefSeq	gene	1468846	1469499	.	+	.	ID=gene1582;Dbxref=GeneID:3796579;Name=fdnI;Note=SDY1606;gbkey=Gene;gene=fdnI;gene_biotype=protein_coding;locus_tag=SDY_1606
NC_007606.1	RefSeq	CDS	1468846	1469499	.	+	0	ID=cds1414;Parent=gene1582;Dbxref=Genbank:YP_403224.1,GeneID:3796579;Name=YP_403224.1;Note=''nitrate-inducible%2C cytochrome b556(fdn) component of formate dehydrogenase'';gbkey=CDS;gene=fdnI;product=formate dehydrogenase-N subunit gamma;protein_id=YP_403224.1;transl_table=11
NC_007606.1	RefSeq	gene	1469727	1470089	.	-	.	ID=gene1583;Dbxref=GeneID:3796580;Name=yddM;Note=SDY1607;gbkey=Gene;gene=yddM;gene_biotype=protein_coding;locus_tag=SDY_1607
NC_007606.1	RefSeq	CDS	1469727	1470089	.	-	0	ID=cds1415;Parent=gene1583;Dbxref=Genbank:YP_403225.1,GeneID:3796580;Name=YP_403225.1;Note=Code: R%3B COG: COG3093;gbkey=CDS;gene=yddM;product=hypothetical protein;protein_id=YP_403225.1;transl_table=11
NC_007606.1	RefSeq	gene	1470071	1471168	.	-	.	ID=gene1584;Dbxref=GeneID:3796581;Name=adhP;Note=SDY1608;gbkey=Gene;gene=adhP;gene_biotype=protein_coding;gene_synonym=adhA;locus_tag=SDY_1608
NC_007606.1	RefSeq	CDS	1470071	1471168	.	-	0	ID=cds1416;Parent=gene1584;Dbxref=Genbank:YP_403226.2,GeneID:3796581;Name=YP_403226.2;Note=similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs;gbkey=CDS;gene=adhP;product=alcohol dehydrogenase;protein_id=YP_403226.2;transl_table=11
NC_007606.1	RefSeq	gene	1471302	1472519	.	-	.	ID=gene1585;Dbxref=GeneID:3796582;Name=sfcA;Note=SDY1609%3B contains in-frame stop codon%3B original product: NAD-linked malate dehydrogenase (malic enzyme);gbkey=Gene;gene=sfcA;gene_biotype=pseudogene;locus_tag=SDY_1609;pseudo=true
NC_007606.1	RefSeq	gene	1472720	1473151	.	+	.	ID=gene1586;Dbxref=GeneID:3796583;Name=osmC;Note=SDY1610;gbkey=Gene;gene=osmC;gene_biotype=protein_coding;locus_tag=SDY_1610
NC_007606.1	RefSeq	CDS	1472720	1473151	.	+	0	ID=cds1417;Parent=gene1586;Dbxref=Genbank:YP_403227.1,GeneID:3796583;Name=YP_403227.1;Note=Code: O%3B COG: COG1764;gbkey=CDS;gene=osmC;product=osmotically inducible protein;protein_id=YP_403227.1;transl_table=11
NC_007606.1	RefSeq	gene	1473207	1474133	.	-	.	ID=gene1587;Dbxref=GeneID:3796584;Name=SDY_1611;Note=SDY1611;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1611
NC_007606.1	RefSeq	CDS	1473207	1474133	.	-	0	ID=cds1418;Parent=gene1587;Dbxref=Genbank:YP_403228.1,GeneID:3796584;Name=YP_403228.1;Note=Code: EP%3B COG: COG1124;gbkey=CDS;product=ATPase;protein_id=YP_403228.1;transl_table=11
NC_007606.1	RefSeq	gene	1474194	1475031	.	-	.	ID=gene1588;Dbxref=GeneID:3796585;Name=SDY_1612;Note=SDY1612%3B frameshift%3B original product:  ATP-binding component of a transport system;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1612;pseudo=true
NC_007606.1	RefSeq	gene	1475496	1476815	.	-	.	ID=gene1589;Dbxref=GeneID:3796586;Name=SDY_1613;Note=SDY1613;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1613
NC_007606.1	RefSeq	CDS	1475496	1476815	.	-	0	ID=cds1419;Parent=gene1589;Dbxref=Genbank:YP_403229.1,GeneID:3796586;Name=YP_403229.1;Note=Code: S%3B COG: COG1649;gbkey=CDS;product=hypothetical protein;protein_id=YP_403229.1;transl_table=11
NC_007606.1	RefSeq	gene	1476946	1478481	.	-	.	ID=gene1590;Dbxref=GeneID:3796587;Name=xasA;Note=SDY1614;gbkey=Gene;gene=xasA;gene_biotype=protein_coding;locus_tag=SDY_1614
NC_007606.1	RefSeq	CDS	1476946	1478481	.	-	0	ID=cds1420;Parent=gene1590;Dbxref=Genbank:YP_403230.1,GeneID:3796587;Name=YP_403230.1;Note=Code: E%3B COG: COG0531;gbkey=CDS;gene=xasA;product=acid sensitivity protein;protein_id=YP_403230.1;transl_table=11
NC_007606.1	RefSeq	gene	1478637	1480037	.	-	.	ID=gene1591;Dbxref=GeneID:3796588;Name=gadB;Note=SDY1615;gbkey=Gene;gene=gadB;gene_biotype=protein_coding;locus_tag=SDY_1615
NC_007606.1	RefSeq	CDS	1478637	1480037	.	-	0	ID=cds1421;Parent=gene1591;Dbxref=Genbank:YP_403231.1,GeneID:3796588;Name=YP_403231.1;Note=Code: E%3B COG: COG0076;gbkey=CDS;gene=gadB;product=glutamate decarboxylase;protein_id=YP_403231.1;transl_table=11
NC_007606.1	RefSeq	region	1480302	1481069	.	+	.	ID=id279;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1480551	1481054	.	+	.	ID=gene1592;Dbxref=GeneID:3796590;Name=insB;Note=SDY1617;gbkey=Gene;gene=insB;gene_biotype=pseudogene;locus_tag=SDY_1617;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1481079	1481507	.	+	.	ID=gene1593;Dbxref=GeneID:3796591;Name=SDY_1618;Note=SDY1618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1618
NC_007606.1	RefSeq	CDS	1481079	1481507	.	+	0	ID=cds1422;Parent=gene1593;Dbxref=Genbank:YP_403234.1,GeneID:3796591;Name=YP_403234.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403234.1;transl_table=11
NC_007606.1	RefSeq	gene	1481741	1482285	.	+	.	ID=gene1594;Dbxref=GeneID:3796592;Name=SDY_1619;Note=SDY1619;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1619;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1482585	1483352	.	+	.	ID=id280;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1482640	1482915	.	+	.	ID=gene1595;Dbxref=GeneID:3796593;Name=insA;Note=SDY1620;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1620
NC_007606.1	RefSeq	CDS	1482640	1482915	.	+	0	ID=cds1423;Parent=gene1595;Dbxref=Genbank:YP_403236.1,GeneID:3796593;Name=YP_403236.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403236.1;transl_table=11
NC_007606.1	RefSeq	region	1483393	1484143	.	+	.	ID=id281;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1483479	1483706	.	+	.	ID=gene1596;Dbxref=GeneID:18263041;Name=SDY_1622a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1622a
NC_007606.1	RefSeq	CDS	1483479	1483706	.	+	0	ID=cds1424;Parent=gene1596;Dbxref=Genbank:YP_009000727.1,GeneID:18263041;Name=YP_009000727.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000727.1;transl_table=11
NC_007606.1	RefSeq	gene	1484106	1484918	.	+	.	ID=gene1597;Dbxref=GeneID:3796596;Name=yneB;Note=SDY1623;gbkey=Gene;gene=yneB;gene_biotype=protein_coding;locus_tag=SDY_1623
NC_007606.1	RefSeq	CDS	1484106	1484918	.	+	0	ID=cds1425;Parent=gene1597;Dbxref=Genbank:YP_403239.1,GeneID:3796596;Name=YP_403239.1;Note=Code: G%3B COG: COG1830;gbkey=CDS;gene=yneB;product=aldolase;protein_id=YP_403239.1;transl_table=11
NC_007606.1	RefSeq	gene	1484942	1485232	.	+	.	ID=gene1598;Dbxref=GeneID:3795944;Name=SDY_1624;Note=SDY1624;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1624
NC_007606.1	RefSeq	CDS	1484942	1485232	.	+	0	ID=cds1426;Parent=gene1598;Dbxref=Genbank:YP_403240.1,GeneID:3795944;Name=YP_403240.1;Note=Code: S%3B COG: COG1359;gbkey=CDS;product=autoinducer-2 (AI-2) modifying protein LsrG;protein_id=YP_403240.1;transl_table=11
NC_007606.1	RefSeq	gene	1485289	1486047	.	+	.	ID=gene1599;Dbxref=GeneID:3795945;Name=SDY_1625;Note=SDY1625;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1625
NC_007606.1	RefSeq	CDS	1485289	1486047	.	+	0	ID=cds1427;Parent=gene1599;Dbxref=Genbank:YP_403241.1,GeneID:3795945;Name=YP_403241.1;Note=catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate;gbkey=CDS;product=trans-aconitate 2-methyltransferase;protein_id=YP_403241.1;transl_table=11
NC_007606.1	RefSeq	gene	1486051	1486964	.	-	.	ID=gene1600;Dbxref=GeneID:3795946;Name=SDY_1626;Note=SDY1626;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1626;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1487161	1488533	.	-	.	ID=gene1601;Dbxref=GeneID:3795948;Name=uxaB;Note=SDY1628%3B frameshift%3B original product: altronate oxidoreductase;gbkey=Gene;gene=uxaB;gene_biotype=pseudogene;locus_tag=SDY_1628;pseudo=true
NC_007606.1	RefSeq	gene	1488678	1490177	.	-	.	ID=gene1602;Dbxref=GeneID:3795949;Name=SDY_1629;Note=SDY1629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1629
NC_007606.1	RefSeq	CDS	1488678	1490177	.	-	0	ID=cds1428;Parent=gene1602;Dbxref=Genbank:YP_403244.1,GeneID:3795949;Name=YP_403244.1;Note=Code: T%3B COG: COG2199;gbkey=CDS;product=hypothetical protein;protein_id=YP_403244.1;transl_table=11
NC_007606.1	RefSeq	gene	1490316	1490675	.	-	.	ID=gene1603;Dbxref=GeneID:3795950;Name=SDY_1630;Note=SDY1630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1630
NC_007606.1	RefSeq	CDS	1490316	1490675	.	-	0	ID=cds1429;Parent=gene1603;Dbxref=Genbank:YP_403245.1,GeneID:3795950;Name=YP_403245.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403245.1;transl_table=11
NC_007606.1	RefSeq	gene	1490675	1491601	.	-	.	ID=gene1604;Dbxref=GeneID:3795951;Name=yneH;Note=SDY1631;gbkey=Gene;gene=yneH;gene_biotype=protein_coding;locus_tag=SDY_1631
NC_007606.1	RefSeq	CDS	1490675	1491601	.	-	0	ID=cds1430;Parent=gene1604;Dbxref=Genbank:YP_403246.1,GeneID:3795951;Name=YP_403246.1;Note=catalyzes the formation of glutamate from glutamine;gbkey=CDS;gene=yneH;product=glutaminase;protein_id=YP_403246.1;transl_table=11
NC_007606.1	RefSeq	gene	1491665	1493077	.	-	.	ID=gene1605;Dbxref=GeneID:3795952;Name=SDY_1632;Note=SDY1632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1632
NC_007606.1	RefSeq	CDS	1491665	1493077	.	-	0	ID=cds1431;Parent=gene1605;Dbxref=Genbank:YP_403247.1,GeneID:3795952;Name=YP_403247.1;Note=in Escherichia coli this enzyme appears to be an NAD+/NADP+-dependent succinate semialdehyde dehydrogenase;gbkey=CDS;product=succinate-semialdehyde dehydrogenase;protein_id=YP_403247.1;transl_table=11
NC_007606.1	RefSeq	gene	1493154	1494035	.	+	.	ID=gene1606;Dbxref=GeneID:3795953;Name=yneJ;Note=SDY1633;gbkey=Gene;gene=yneJ;gene_biotype=protein_coding;locus_tag=SDY_1633
NC_007606.1	RefSeq	CDS	1493154	1494035	.	+	0	ID=cds1432;Parent=gene1606;Dbxref=Genbank:YP_403248.1,GeneID:3795953;Name=YP_403248.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=yneJ;product=LysR family transcriptional regulator;protein_id=YP_403248.1;transl_table=11
NC_007606.1	RefSeq	gene	1494113	1494754	.	+	.	ID=gene1607;Dbxref=GeneID:3795954;Name=SDY_1634;Note=SDY1634;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1634
NC_007606.1	RefSeq	CDS	1494113	1494754	.	+	0	ID=cds1433;Parent=gene1607;Dbxref=Genbank:YP_403249.1,GeneID:3795954;Name=YP_403249.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403249.1;transl_table=11
NC_007606.1	RefSeq	region	1494736	1495502	.	-	.	ID=id282;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1494751	1495146	.	-	.	ID=gene1608;Dbxref=GeneID:3795955;Name=SDY_1635;Note=SDY1635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1635
NC_007606.1	RefSeq	CDS	1494751	1495146	.	-	0	ID=cds1434;Parent=gene1608;Dbxref=Genbank:YP_403250.1,GeneID:3795955;Name=YP_403250.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403250.1;transl_table=11
NC_007606.1	RefSeq	gene	1495597	1496088	.	+	.	ID=gene1609;Dbxref=GeneID:3795956;Name=SDY_1636;Note=SDY1636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1636
NC_007606.1	RefSeq	CDS	1495597	1496088	.	+	0	ID=cds1435;Parent=gene1609;Dbxref=Genbank:YP_403251.1,GeneID:3795956;Name=YP_403251.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403251.1;transl_table=11
NC_007606.1	RefSeq	gene	1496222	1496467	.	+	.	ID=gene1610;Dbxref=GeneID:3795957;Name=ymjA;Note=SDY1637;gbkey=Gene;gene=ymjA;gene_biotype=protein_coding;locus_tag=SDY_1637
NC_007606.1	RefSeq	CDS	1496222	1496467	.	+	0	ID=cds1436;Parent=gene1610;Dbxref=Genbank:YP_403252.1,GeneID:3795957;Name=YP_403252.1;gbkey=CDS;gene=ymjA;product=hypothetical protein;protein_id=YP_403252.1;transl_table=11
NC_007606.1	RefSeq	gene	1496780	1498423	.	+	.	ID=gene1611;Dbxref=GeneID:3795958;Name=sapA;Note=SDY1638;gbkey=Gene;gene=sapA;gene_biotype=protein_coding;locus_tag=SDY_1638
NC_007606.1	RefSeq	CDS	1496780	1498423	.	+	0	ID=cds1437;Parent=gene1611;Dbxref=Genbank:YP_403253.1,GeneID:3795958;Name=YP_403253.1;Note=Code: E%3B COG: COG4166;gbkey=CDS;gene=sapA;product=protein SapA;protein_id=YP_403253.1;transl_table=11
NC_007606.1	RefSeq	gene	1498420	1499385	.	+	.	ID=gene1612;Dbxref=GeneID:3795959;Name=sapB;Note=SDY1639;gbkey=Gene;gene=sapB;gene_biotype=protein_coding;locus_tag=SDY_1639
NC_007606.1	RefSeq	CDS	1498420	1499385	.	+	0	ID=cds1438;Parent=gene1612;Dbxref=Genbank:YP_403254.1,GeneID:3795959;Name=YP_403254.1;Note=Code: V%3B COG: COG4168;gbkey=CDS;gene=sapB;product=hypothetical protein;protein_id=YP_403254.1;transl_table=11
NC_007606.1	RefSeq	gene	1499515	1506098	.	-	.	ID=gene1613;Dbxref=GeneID:3795960;Name=SDY_1640;Note=SDY1640;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1640;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1504694	1505461	.	-	.	ID=id283;Dbxref=GeneID:3795960;gbkey=mobile_element
NC_007606.1	RefSeq	region	1506073	1506818	.	+	.	ID=id284;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1506137	1506439	.	+	.	ID=gene1614;Dbxref=GeneID:3795847;Name=SDY_1644;Note=SDY1644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1644
NC_007606.1	RefSeq	CDS	1506137	1506439	.	+	0	ID=cds1439;Parent=gene1614;Dbxref=Genbank:YP_403259.1,GeneID:3795847;Name=YP_403259.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403259.1;transl_table=11
NC_007606.1	RefSeq	region	1506819	1508149	.	-	.	ID=id285;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1506830	1507735	.	-	.	ID=gene1615;Dbxref=GeneID:3795848;Name=SDY_1645;Note=SDY1645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1645
NC_007606.1	RefSeq	CDS	1506830	1507735	.	-	0	ID=cds1440;Parent=gene1615;Dbxref=Genbank:YP_403260.2,GeneID:3795848;Name=YP_403260.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_403260.2;transl_table=11
NC_007606.1	RefSeq	gene	1507693	1508058	.	-	.	ID=gene1616;Dbxref=GeneID:3795849;Name=SDY_1646;Note=SDY1646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1646
NC_007606.1	RefSeq	CDS	1507693	1508058	.	-	0	ID=cds1441;Parent=gene1616;Dbxref=Genbank:YP_403261.1,GeneID:3795849;Name=YP_403261.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_403261.1;transl_table=11
NC_007606.1	RefSeq	gene	1508069	1509232	.	+	.	ID=gene1617;Dbxref=GeneID:3795850;Name=narU;Note=SDY1647%3B truncated%3B original product: nitrite extrusion protein 2;gbkey=Gene;gene=narU;gene_biotype=pseudogene;locus_tag=SDY_1647;pseudo=true
NC_007606.1	RefSeq	gene	1509431	1513880	.	+	.	ID=gene1618;Dbxref=GeneID:3795851;Name=narZ;Note=''SDY1648%3B contains iso-IS1 insertion%3B original product: cryptic nitrate reductase 2%2C alpha subunit'';gbkey=Gene;gene=narZ;gene_biotype=pseudogene;locus_tag=SDY_1648;pseudo=true
NC_007606.1	RefSeq	region	1511408	1512178	.	-	.	ID=id286;gbkey=mobile_element;gene=narZ
NC_007606.1	RefSeq	gene	1513880	1515403	.	+	.	ID=gene1619;Dbxref=GeneID:3795854;Name=narY;Note=SDY1651;gbkey=Gene;gene=narY;gene_biotype=protein_coding;locus_tag=SDY_1651
NC_007606.1	RefSeq	CDS	1513880	1515403	.	+	0	ID=cds1442;Parent=gene1619;Dbxref=Genbank:YP_403264.1,GeneID:3795854;Name=YP_403264.1;Note=Code: C%3B COG: COG1140;gbkey=CDS;gene=narY;product=cryptic nitrate reductase 2 subunit beta;protein_id=YP_403264.1;transl_table=11
NC_007606.1	RefSeq	gene	1515403	1516098	.	+	.	ID=gene1620;Dbxref=GeneID:3795855;Name=narW;Note=SDY1652;gbkey=Gene;gene=narW;gene_biotype=protein_coding;locus_tag=SDY_1652
NC_007606.1	RefSeq	CDS	1515403	1516098	.	+	0	ID=cds1443;Parent=gene1620;Dbxref=Genbank:YP_403265.1,GeneID:3795855;Name=YP_403265.1;Note=Code: C%3B COG: COG2180;gbkey=CDS;gene=narW;product=cryptic nitrate reductase 2 subunit delta;protein_id=YP_403265.1;transl_table=11
NC_007606.1	RefSeq	gene	1516095	1516775	.	+	.	ID=gene1621;Dbxref=GeneID:3795856;Name=narV;Note=SDY1653;gbkey=Gene;gene=narV;gene_biotype=protein_coding;locus_tag=SDY_1653
NC_007606.1	RefSeq	CDS	1516095	1516775	.	+	0	ID=cds1444;Parent=gene1621;Dbxref=Genbank:YP_403266.1,GeneID:3795856;Name=YP_403266.1;Note=Code: C%3B COG: COG2181;gbkey=CDS;gene=narV;product=cryptic nitrate reductase 2 subunit gamma;protein_id=YP_403266.1;transl_table=11
NC_007606.1	RefSeq	gene	1516855	1517748	.	+	.	ID=gene1622;Dbxref=GeneID:3795857;Name=yddE;Note=SDY1654;gbkey=Gene;gene=yddE;gene_biotype=protein_coding;locus_tag=SDY_1654
NC_007606.1	RefSeq	CDS	1516855	1517748	.	+	0	ID=cds1445;Parent=gene1622;Dbxref=Genbank:YP_403267.1,GeneID:3795857;Name=YP_403267.1;Note=Code: R%3B COG: COG0384;gbkey=CDS;gene=yddE;product=hypothetical protein;protein_id=YP_403267.1;transl_table=11
NC_007606.1	RefSeq	gene	1517844	1518455	.	-	.	ID=gene1623;Dbxref=GeneID:3795858;Name=SDY_1655;Note=SDY1655%3B truncated%3B original product:  N-hydroxyarylamine O-acetyltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1655;pseudo=true
NC_007606.1	RefSeq	region	1518464	1519231	.	+	.	ID=id287;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1518522	1518794	.	+	.	ID=gene1624;Dbxref=GeneID:18263042;Name=SDY_1654a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1654a
NC_007606.1	RefSeq	CDS	1518522	1518794	.	+	0	ID=cds1446;Parent=gene1624;Dbxref=Genbank:YP_009000728.1,GeneID:18263042;Name=YP_009000728.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000728.1;transl_table=11
NC_007606.1	RefSeq	gene	1519195	1519872	.	+	.	ID=gene1625;Dbxref=GeneID:3795860;Name=SDY_1657;Note=SDY1657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1657
NC_007606.1	RefSeq	CDS	1519195	1519872	.	+	0	ID=cds1447;Parent=gene1625;Dbxref=Genbank:YP_403269.1,GeneID:3795860;Name=YP_403269.1;gbkey=CDS;product=adhesin;protein_id=YP_403269.1;transl_table=11
NC_007606.1	RefSeq	gene	1520206	1522485	.	+	.	ID=gene1626;Dbxref=GeneID:3795861;Name=SDY_1658;Note=SDY1658;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1658
NC_007606.1	RefSeq	CDS	1520206	1522485	.	+	0	ID=cds1448;Parent=gene1626;Dbxref=Genbank:YP_403270.1,GeneID:3795861;Name=YP_403270.1;Note=in Escherichia coli it may be involved in repression of type III secretion system (TTSS) genes of the host cell%3B involved with increased resistance to low pH%3B member of the prokaryotic molybdopterin-containing oxidoreductase;gbkey=CDS;product=oxidoreductase;protein_id=YP_403270.1;transl_table=11
NC_007606.1	RefSeq	gene	1522734	1522931	.	+	.	ID=gene1627;Dbxref=GeneID:3795862;Name=SDY_1659;Note=SDY1659;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1659
NC_007606.1	RefSeq	CDS	1522734	1522931	.	+	0	ID=cds1449;Parent=gene1627;Dbxref=Genbank:YP_403271.1,GeneID:3795862;Name=YP_403271.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403271.1;transl_table=11
NC_007606.1	RefSeq	gene	1523006	1523785	.	+	.	ID=gene1628;Dbxref=GeneID:3795863;Name=SDY_1660;Note=SDY1660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1660
NC_007606.1	RefSeq	CDS	1523006	1523785	.	+	0	ID=cds1450;Parent=gene1628;Dbxref=Genbank:YP_403272.1,GeneID:3795863;Name=YP_403272.1;Note=regulates the cellular response to acid resistance;gbkey=CDS;product=transcriptional regulator YdeO;protein_id=YP_403272.1;transl_table=11
NC_007606.1	RefSeq	gene	1524172	1524657	.	+	.	ID=gene1629;Dbxref=GeneID:3795864;Name=SDY_1661;Note=SDY1661;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1661
NC_007606.1	RefSeq	CDS	1524172	1524657	.	+	0	ID=cds1451;Parent=gene1629;Dbxref=Genbank:YP_403273.1,GeneID:3795864;Name=YP_403273.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403273.1;transl_table=11
NC_007606.1	RefSeq	region	1524650	1524891	.	+	.	ID=id288;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	1524891	1525656	.	-	.	ID=id289;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1524905	1525300	.	-	.	ID=gene1630;Dbxref=GeneID:3795865;Name=SDY_1662;Note=SDY1662;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1662
NC_007606.1	RefSeq	CDS	1524905	1525300	.	-	0	ID=cds1452;Parent=gene1630;Dbxref=Genbank:YP_403274.1,GeneID:3795865;Name=YP_403274.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403274.1;transl_table=11
NC_007606.1	RefSeq	gene	1525327	1525599	.	-	.	ID=gene1631;Dbxref=GeneID:18263043;Name=SDY_1661a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1661a
NC_007606.1	RefSeq	CDS	1525327	1525599	.	-	0	ID=cds1453;Parent=gene1631;Dbxref=Genbank:YP_009000729.1,GeneID:18263043;Name=YP_009000729.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000729.1;transl_table=11
NC_007606.1	RefSeq	gene	1525712	1526020	.	+	.	ID=gene1632;Dbxref=GeneID:3796227;Name=SDY_1663;Note=SDY1663;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1663
NC_007606.1	RefSeq	CDS	1525712	1526020	.	+	0	ID=cds1454;Parent=gene1632;Dbxref=Genbank:YP_403275.1,GeneID:3796227;Name=YP_403275.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403275.1;transl_table=11
NC_007606.1	RefSeq	region	1527164	1527930	.	+	.	ID=id290;gbkey=mobile_element
NC_007606.1	RefSeq	region	1528159	1528924	.	+	.	ID=id291;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1528216	1528488	.	+	.	ID=gene1633;Dbxref=GeneID:18263044;Name=SDY_1667a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1667a
NC_007606.1	RefSeq	CDS	1528216	1528488	.	+	0	ID=cds1455;Parent=gene1633;Dbxref=Genbank:YP_009000730.1,GeneID:18263044;Name=YP_009000730.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000730.1;transl_table=11
NC_007606.1	RefSeq	gene	1528515	1528910	.	+	.	ID=gene1634;Dbxref=GeneID:3796231;Name=SDY_1667;Note=SDY1667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1667
NC_007606.1	RefSeq	CDS	1528515	1528910	.	+	0	ID=cds1456;Parent=gene1634;Dbxref=Genbank:YP_403279.1,GeneID:3796231;Name=YP_403279.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403279.1;transl_table=11
NC_007606.1	RefSeq	gene	1529017	1529355	.	+	.	ID=gene1635;Dbxref=GeneID:3796232;Name=SDY_1668;Note=SDY1668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1668
NC_007606.1	RefSeq	CDS	1529017	1529355	.	+	0	ID=cds1457;Parent=gene1635;Dbxref=Genbank:YP_403280.1,GeneID:3796232;Name=YP_403280.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403280.1;transl_table=11
NC_007606.1	RefSeq	gene	1529522	1531258	.	-	.	ID=gene1636;Dbxref=GeneID:3796233;Name=SDY_1669;Note=SDY1669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1669
NC_007606.1	RefSeq	CDS	1529522	1531258	.	-	0	ID=cds1458;Parent=gene1636;Dbxref=Genbank:YP_403281.1,GeneID:3796233;Name=YP_403281.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403281.1;transl_table=11
NC_007606.1	RefSeq	gene	1531311	1532576	.	-	.	ID=gene1637;Dbxref=GeneID:3796234;Name=SDY_1670;Note=SDY1670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1670
NC_007606.1	RefSeq	CDS	1531311	1532576	.	-	0	ID=cds1459;Parent=gene1637;Dbxref=Genbank:YP_403282.1,GeneID:3796234;Name=YP_403282.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403282.1;transl_table=11
NC_007606.1	RefSeq	gene	1532587	1533409	.	-	.	ID=gene1638;Dbxref=GeneID:3796235;Name=SDY_1671;Note=SDY1671;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1671;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1532653	1533916	.	-	.	ID=id292;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1533550	1533852	.	-	.	ID=gene1639;Dbxref=GeneID:3796236;Name=SDY_1672;Note=SDY1672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1672
NC_007606.1	RefSeq	CDS	1533550	1533852	.	-	0	ID=cds1460;Parent=gene1639;Dbxref=Genbank:YP_403284.1,GeneID:3796236;Name=YP_403284.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403284.1;transl_table=11
NC_007606.1	RefSeq	gene	1534354	1534623	.	-	.	ID=gene1640;Dbxref=GeneID:3796237;Name=SDY_1673;Note=SDY1673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1673
NC_007606.1	RefSeq	CDS	1534354	1534623	.	-	0	ID=cds1461;Parent=gene1640;Dbxref=Genbank:YP_403285.1,GeneID:3796237;Name=YP_403285.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403285.1;transl_table=11
NC_007606.1	RefSeq	gene	1534642	1535052	.	-	.	ID=gene1641;Dbxref=GeneID:3796238;Name=SDY_1674;Note=SDY1674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1674
NC_007606.1	RefSeq	CDS	1534642	1535052	.	-	0	ID=cds1462;Parent=gene1641;Dbxref=Genbank:YP_403286.1,GeneID:3796238;Name=YP_403286.1;Note=Code: Q%3B COG: COG2050;gbkey=CDS;product=hypothetical protein;protein_id=YP_403286.1;transl_table=11
NC_007606.1	RefSeq	gene	1535049	1538105	.	-	.	ID=gene1642;Dbxref=GeneID:3796239;Name=ydiJ;Note=SDY1675;gbkey=Gene;gene=ydiJ;gene_biotype=protein_coding;locus_tag=SDY_1675
NC_007606.1	RefSeq	CDS	1535049	1538105	.	-	0	ID=cds1463;Parent=gene1642;Dbxref=Genbank:YP_403287.1,GeneID:3796239;Name=YP_403287.1;Note=Code: C%3B COG: COG0277;gbkey=CDS;gene=ydiJ;product=oxidase;protein_id=YP_403287.1;transl_table=11
NC_007606.1	RefSeq	gene	1538494	1539606	.	+	.	ID=gene1643;Dbxref=GeneID:3796240;Name=SDY_1676;Note=SDY1676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1676
NC_007606.1	RefSeq	CDS	1538494	1539606	.	+	0	ID=cds1464;Parent=gene1643;Dbxref=Genbank:YP_403288.1,GeneID:3796240;Name=YP_403288.1;Note=''YdiK%3B inner membrane protein%3B ydiK promoter presents a PurR sequence%2C suggesting that its expression is purine-regulated%3B unknown function'';gbkey=CDS;product=inner membrane protein;protein_id=YP_403288.1;transl_table=11
NC_007606.1	RefSeq	gene	1539969	1540856	.	-	.	ID=gene1644;Dbxref=GeneID:3796241;Name=SDY_1677;Note=SDY1677;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1677;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1539993	1541258	.	-	.	ID=id293;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1540892	1541194	.	-	.	ID=gene1645;Dbxref=GeneID:3796242;Name=SDY_1678;Note=SDY1678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1678
NC_007606.1	RefSeq	CDS	1540892	1541194	.	-	0	ID=cds1465;Parent=gene1645;Dbxref=Genbank:YP_403290.1,GeneID:3796242;Name=YP_403290.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403290.1;transl_table=11
NC_007606.1	RefSeq	gene	1541277	1541660	.	+	.	ID=gene1646;Dbxref=GeneID:3796243;Name=SDY_1679;Note=SDY1679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1679
NC_007606.1	RefSeq	CDS	1541277	1541660	.	+	0	ID=cds1466;Parent=gene1646;Dbxref=Genbank:YP_403291.1,GeneID:3796243;Name=YP_403291.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403291.1;transl_table=11
NC_007606.1	RefSeq	region	1541773	1542538	.	-	.	ID=id294;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1541787	1542182	.	-	.	ID=gene1647;Dbxref=GeneID:3796244;Name=SDY_1680;Note=SDY1680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1680
NC_007606.1	RefSeq	CDS	1541787	1542182	.	-	0	ID=cds1467;Parent=gene1647;Dbxref=Genbank:YP_403292.1,GeneID:3796244;Name=YP_403292.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403292.1;transl_table=11
NC_007606.1	RefSeq	gene	1542209	1542481	.	-	.	ID=gene1648;Dbxref=GeneID:18263045;Name=SDY_1682a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1682a
NC_007606.1	RefSeq	CDS	1542209	1542481	.	-	0	ID=cds1468;Parent=gene1648;Dbxref=Genbank:YP_009000731.1,GeneID:18263045;Name=YP_009000731.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000731.1;transl_table=11
NC_007606.1	RefSeq	gene	1542606	1542986	.	+	.	ID=gene1649;Dbxref=GeneID:3796246;Name=SDY_1682;Note=SDY1682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1682
NC_007606.1	RefSeq	CDS	1542606	1542986	.	+	0	ID=cds1469;Parent=gene1649;Dbxref=Genbank:YP_403294.1,GeneID:3796246;Name=YP_403294.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403294.1;transl_table=11
NC_007606.1	RefSeq	region	1542963	1543735	.	+	.	ID=id295;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1543026	1543298	.	+	.	ID=gene1650;Dbxref=GeneID:18263046;Name=SDY_1682b;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1682b
NC_007606.1	RefSeq	CDS	1543026	1543298	.	+	0	ID=cds1470;Parent=gene1650;Dbxref=Genbank:YP_009000732.1,GeneID:18263046;Name=YP_009000732.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000732.1;transl_table=11
NC_007606.1	RefSeq	gene	1543799	1544161	.	+	.	ID=gene1651;Dbxref=GeneID:3796248;Name=SDY_1684;Note=SDY1684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1684
NC_007606.1	RefSeq	CDS	1543799	1544161	.	+	0	ID=cds1471;Parent=gene1651;Dbxref=Genbank:YP_403296.1,GeneID:3796248;Name=YP_403296.1;Note=Code: T%3B COG: COG2199;gbkey=CDS;product=hypothetical protein;protein_id=YP_403296.1;transl_table=11
NC_007606.1	RefSeq	gene	1544204	1544707	.	+	.	ID=gene1652;Dbxref=GeneID:3796249;Name=yeaK;Note=SDY1685;gbkey=Gene;gene=yeaK;gene_biotype=protein_coding;locus_tag=SDY_1685
NC_007606.1	RefSeq	CDS	1544204	1544707	.	+	0	ID=cds1472;Parent=gene1652;Dbxref=Genbank:YP_403297.1,GeneID:3796249;Name=YP_403297.1;Note=Code: S%3B COG: COG2606;gbkey=CDS;gene=yeaK;product=hypothetical protein;protein_id=YP_403297.1;transl_table=11
NC_007606.1	RefSeq	gene	1544708	1544860	.	-	.	ID=gene1653;Dbxref=GeneID:3796250;Name=SDY_1686;Note=SDY1686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1686
NC_007606.1	RefSeq	CDS	1544708	1544860	.	-	0	ID=cds1473;Parent=gene1653;Dbxref=Genbank:YP_403298.1,GeneID:3796250;Name=YP_403298.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403298.1;transl_table=11
NC_007606.1	RefSeq	gene	1544982	1545428	.	+	.	ID=gene1654;Dbxref=GeneID:3796251;Name=yeaL;Note=SDY1687;gbkey=Gene;gene=yeaL;gene_biotype=protein_coding;locus_tag=SDY_1687
NC_007606.1	RefSeq	CDS	1544982	1545428	.	+	0	ID=cds1474;Parent=gene1654;Dbxref=Genbank:YP_403299.1,GeneID:3796251;Name=YP_403299.1;Note=Code: S%3B COG: COG2707;gbkey=CDS;gene=yeaL;product=hypothetical protein;protein_id=YP_403299.1;transl_table=11
NC_007606.1	RefSeq	gene	1545385	1546206	.	-	.	ID=gene1655;Dbxref=GeneID:3796252;Name=yeaM;Note=SDY1688;gbkey=Gene;gene=yeaM;gene_biotype=protein_coding;locus_tag=SDY_1688
NC_007606.1	RefSeq	CDS	1545385	1546206	.	-	0	ID=cds1475;Parent=gene1655;Dbxref=Genbank:YP_403300.1,GeneID:3796252;Name=YP_403300.1;Note=Code: K%3B COG: COG2207;gbkey=CDS;gene=yeaM;product=AraC family transcriptional regulator;protein_id=YP_403300.1;transl_table=11
NC_007606.1	RefSeq	gene	1546303	1547484	.	+	.	ID=gene1656;Dbxref=GeneID:3796253;Name=yeaN;Note=SDY1689;gbkey=Gene;gene=yeaN;gene_biotype=protein_coding;locus_tag=SDY_1689
NC_007606.1	RefSeq	CDS	1546303	1547484	.	+	0	ID=cds1476;Parent=gene1656;Dbxref=Genbank:YP_403301.1,GeneID:3796253;Name=YP_403301.1;Note=Code: P%3B COG: COG2807;gbkey=CDS;gene=yeaN;product=amino acid/amine transport protein;protein_id=YP_403301.1;transl_table=11
NC_007606.1	RefSeq	gene	1547518	1547886	.	+	.	ID=gene1657;Dbxref=GeneID:3796254;Name=yeaO;Note=SDY1690;gbkey=Gene;gene=yeaO;gene_biotype=protein_coding;locus_tag=SDY_1690
NC_007606.1	RefSeq	CDS	1547518	1547886	.	+	0	ID=cds1477;Parent=gene1657;Dbxref=Genbank:YP_403302.1,GeneID:3796254;Name=YP_403302.1;Note=Code: S%3B COG: COG3189;gbkey=CDS;gene=yeaO;product=hypothetical protein;protein_id=YP_403302.1;transl_table=11
NC_007606.1	RefSeq	gene	1547908	1548162	.	-	.	ID=gene1658;Dbxref=GeneID:3796255;Name=yoaF;Note=SDY1691;gbkey=Gene;gene=yoaF;gene_biotype=protein_coding;locus_tag=SDY_1691
NC_007606.1	RefSeq	CDS	1547908	1548162	.	-	0	ID=cds1478;Parent=gene1658;Dbxref=Genbank:YP_403303.1,GeneID:3796255;Name=YP_403303.1;Note=Code: R%3B COG: COG3042;gbkey=CDS;gene=yoaF;product=hypothetical protein;protein_id=YP_403303.1;transl_table=11
NC_007606.1	RefSeq	gene	1548216	1549370	.	+	.	ID=gene1659;Dbxref=GeneID:3796256;Name=yeaP;Note=SDY1692;gbkey=Gene;gene=yeaP;gene_biotype=protein_coding;locus_tag=SDY_1692
NC_007606.1	RefSeq	CDS	1548216	1549370	.	+	0	ID=cds1479;Parent=gene1659;Dbxref=Genbank:YP_403304.1,GeneID:3796256;Name=YP_403304.1;Note=Code: T%3B COG: COG2203;gbkey=CDS;gene=yeaP;product=hypothetical protein;protein_id=YP_403304.1;transl_table=11
NC_007606.1	RefSeq	region	1549508	1550294	.	-	.	ID=id296;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1549529	1549924	.	-	.	ID=gene1660;Dbxref=GeneID:3796257;Name=SDY_1693;Note=SDY1693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1693
NC_007606.1	RefSeq	CDS	1549529	1549924	.	-	0	ID=cds1480;Parent=gene1660;Dbxref=Genbank:YP_403305.2,GeneID:3796257;Name=YP_403305.2;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403305.2;transl_table=11
NC_007606.1	RefSeq	gene	1549951	1550223	.	-	.	ID=gene1661;Dbxref=GeneID:18263047;Name=SDY_1695a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1695a
NC_007606.1	RefSeq	CDS	1549951	1550223	.	-	0	ID=cds1481;Parent=gene1661;Dbxref=Genbank:YP_009000733.1,GeneID:18263047;Name=YP_009000733.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000733.1;transl_table=11
NC_007606.1	RefSeq	gene	1550411	1550659	.	-	.	ID=gene1662;Dbxref=GeneID:3796259;Name=yeaQ;Note=SDY1695;gbkey=Gene;gene=yeaQ;gene_biotype=protein_coding;locus_tag=SDY_1695
NC_007606.1	RefSeq	CDS	1550411	1550659	.	-	0	ID=cds1482;Parent=gene1662;Dbxref=Genbank:YP_403307.1,GeneID:3796259;Name=YP_403307.1;Note=Code: S%3B COG: COG2261;gbkey=CDS;gene=yeaQ;product=hypothetical protein;protein_id=YP_403307.1;transl_table=11
NC_007606.1	RefSeq	gene	1550807	1550989	.	-	.	ID=gene1663;Dbxref=GeneID:3796260;Name=yoaG;Note=SDY1696;gbkey=Gene;gene=yoaG;gene_biotype=protein_coding;locus_tag=SDY_1696
NC_007606.1	RefSeq	CDS	1550807	1550989	.	-	0	ID=cds1483;Parent=gene1663;Dbxref=Genbank:YP_403308.1,GeneID:3796260;Name=YP_403308.1;gbkey=CDS;gene=yoaG;product=hypothetical protein;protein_id=YP_403308.1;transl_table=11
NC_007606.1	RefSeq	gene	1550993	1551352	.	-	.	ID=gene1664;Dbxref=GeneID:3796261;Name=yeaR;Note=SDY1697;gbkey=Gene;gene=yeaR;gene_biotype=protein_coding;locus_tag=SDY_1697
NC_007606.1	RefSeq	CDS	1550993	1551352	.	-	0	ID=cds1484;Parent=gene1664;Dbxref=Genbank:YP_403309.1,GeneID:3796261;Name=YP_403309.1;Note=Code: P%3B COG: COG3615;gbkey=CDS;gene=yeaR;product=hypothetical protein;protein_id=YP_403309.1;transl_table=11
NC_007606.1	RefSeq	gene	1551525	1552163	.	-	.	ID=gene1665;Dbxref=GeneID:3796262;Name=yeaS;Note=SDY1698;gbkey=Gene;gene=yeaS;gene_biotype=protein_coding;locus_tag=SDY_1698
NC_007606.1	RefSeq	CDS	1551525	1552163	.	-	0	ID=cds1485;Parent=gene1665;Dbxref=Genbank:YP_403310.1,GeneID:3796262;Name=YP_403310.1;Note=Code: E%3B COG: COG1280;gbkey=CDS;gene=yeaS;product=leucine export protein LeuE;protein_id=YP_403310.1;transl_table=11
NC_007606.1	RefSeq	region	1552249	1553019	.	-	.	ID=id297;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1552263	1552658	.	-	.	ID=gene1666;Dbxref=GeneID:3796263;Name=SDY_1699;Note=SDY1699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1699
NC_007606.1	RefSeq	CDS	1552263	1552658	.	-	0	ID=cds1486;Parent=gene1666;Dbxref=Genbank:YP_403311.1,GeneID:3796263;Name=YP_403311.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403311.1;transl_table=11
NC_007606.1	RefSeq	gene	1552686	1552958	.	-	.	ID=gene1667;Dbxref=GeneID:18263048;Name=SDY_1699a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1699a
NC_007606.1	RefSeq	CDS	1552686	1552958	.	-	0	ID=cds1487;Parent=gene1667;Dbxref=Genbank:YP_009000734.1,GeneID:18263048;Name=YP_009000734.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000734.1;transl_table=11
NC_007606.1	RefSeq	gene	1553027	1553971	.	-	.	ID=gene1668;Dbxref=GeneID:3796264;Name=yeaT;Note=SDY1700;gbkey=Gene;gene=yeaT;gene_biotype=protein_coding;locus_tag=SDY_1700
NC_007606.1	RefSeq	CDS	1553027	1553971	.	-	0	ID=cds1488;Parent=gene1668;Dbxref=Genbank:YP_403312.1,GeneID:3796264;Name=YP_403312.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=yeaT;product=LysR family transcriptional regulator;protein_id=YP_403312.1;transl_table=11
NC_007606.1	RefSeq	gene	1554053	1555138	.	+	.	ID=gene1669;Dbxref=GeneID:3796265;Name=yeaU;Note=SDY1701;gbkey=Gene;gene=yeaU;gene_biotype=protein_coding;locus_tag=SDY_1701
NC_007606.1	RefSeq	CDS	1554053	1555138	.	+	0	ID=cds1489;Parent=gene1669;Dbxref=Genbank:YP_403313.1,GeneID:3796265;Name=YP_403313.1;Note=Code: CE%3B COG: COG0473;gbkey=CDS;gene=yeaU;product=tartrate dehydrogenase;protein_id=YP_403313.1;transl_table=11
NC_007606.1	RefSeq	gene	1555389	1555604	.	+	.	ID=gene1670;Dbxref=GeneID:3796266;Name=SDY_1702;Note=SDY1702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1702
NC_007606.1	RefSeq	CDS	1555389	1555604	.	+	0	ID=cds1490;Parent=gene1670;Dbxref=Genbank:YP_403314.1,GeneID:3796266;Name=YP_403314.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403314.1;transl_table=11
NC_007606.1	RefSeq	region	1555587	1556335	.	+	.	ID=id298;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1555926	1556321	.	+	.	ID=gene1671;Dbxref=GeneID:3796268;Name=SDY_1704;Note=SDY1704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1704
NC_007606.1	RefSeq	CDS	1555926	1556321	.	+	0	ID=cds1491;Parent=gene1671;Dbxref=Genbank:YP_403316.1,GeneID:3796268;Name=YP_403316.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403316.1;transl_table=11
NC_007606.1	RefSeq	gene	1556419	1557743	.	+	.	ID=gene1672;Dbxref=GeneID:3796269;Name=yeaV;Note=SDY1705%3B frameshift%3B original product:  transport protein;gbkey=Gene;gene=yeaV;gene_biotype=pseudogene;locus_tag=SDY_1705;pseudo=true
NC_007606.1	RefSeq	gene	1557775	1558899	.	+	.	ID=gene1673;Dbxref=GeneID:3796270;Name=yeaW;Note=SDY1706;gbkey=Gene;gene=yeaW;gene_biotype=protein_coding;locus_tag=SDY_1706
NC_007606.1	RefSeq	CDS	1557775	1558899	.	+	0	ID=cds1492;Parent=gene1673;Dbxref=Genbank:YP_403317.1,GeneID:3796270;Name=YP_403317.1;Note=Code: PR%3B COG: COG4638;gbkey=CDS;gene=yeaW;product=hypothetical protein;protein_id=YP_403317.1;transl_table=11
NC_007606.1	RefSeq	gene	1558955	1559920	.	+	.	ID=gene1674;Dbxref=GeneID:3796271;Name=yeaX;Note=SDY1707;gbkey=Gene;gene=yeaX;gene_biotype=protein_coding;locus_tag=SDY_1707
NC_007606.1	RefSeq	CDS	1558955	1559920	.	+	0	ID=cds1493;Parent=gene1674;Dbxref=Genbank:YP_403318.1,GeneID:3796271;Name=YP_403318.1;Note=Code: C%3B COG: COG1018;gbkey=CDS;gene=yeaX;product=diogenase subunit beta;protein_id=YP_403318.1;transl_table=11
NC_007606.1	RefSeq	gene	1559974	1561101	.	-	.	ID=gene1675;Dbxref=GeneID:3796272;Name=rnd;Note=SDY1708;gbkey=Gene;gene=rnd;gene_biotype=protein_coding;locus_tag=SDY_1708
NC_007606.1	RefSeq	CDS	1559974	1561101	.	-	0	ID=cds1494;Parent=gene1675;Dbxref=Genbank:YP_403319.1,GeneID:3796272;Name=YP_403319.1;Note=Code: J%3B COG: COG0349;gbkey=CDS;gene=rnd;product=ribonuclease D;protein_id=YP_403319.1;transl_table=11
NC_007606.1	RefSeq	gene	1561171	1562856	.	-	.	ID=gene1676;Dbxref=GeneID:3796273;Name=fadD;Note=SDY1709;gbkey=Gene;gene=fadD;gene_biotype=protein_coding;locus_tag=SDY_1709
NC_007606.1	RefSeq	CDS	1561171	1562856	.	-	0	ID=cds1495;Parent=gene1676;Dbxref=Genbank:YP_403320.1,GeneID:3796273;Name=YP_403320.1;Note=Activates fatty acids by binding to coenzyme A;gbkey=CDS;gene=fadD;product=long-chain-fatty-acid--CoA ligase;protein_id=YP_403320.1;transl_table=11
NC_007606.1	RefSeq	gene	1563061	1563642	.	-	.	ID=gene1677;Dbxref=GeneID:3796274;Name=SDY_1710;Note=SDY1710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1710
NC_007606.1	RefSeq	CDS	1563061	1563642	.	-	0	ID=cds1496;Parent=gene1677;Dbxref=Genbank:YP_403321.1,GeneID:3796274;Name=YP_403321.1;Note=Code: M%3B COG: COG3065;gbkey=CDS;product=outer membrane protein;protein_id=YP_403321.1;transl_table=11
NC_007606.1	RefSeq	gene	1563682	1564377	.	-	.	ID=gene1678;Dbxref=GeneID:3796275;Name=yeaZ;Note=SDY1711;gbkey=Gene;gene=yeaZ;gene_biotype=protein_coding;locus_tag=SDY_1711
NC_007606.1	RefSeq	CDS	1563682	1564377	.	-	0	ID=cds1497;Parent=gene1678;Dbxref=Genbank:YP_403322.1,GeneID:3796275;Name=YP_403322.1;Note=Code: O%3B COG: COG1214;gbkey=CDS;gene=yeaZ;product=hypothetical protein;protein_id=YP_403322.1;transl_table=11
NC_007606.1	RefSeq	gene	1564435	1566345	.	-	.	ID=gene1679;Dbxref=GeneID:3796276;Name=SDY_1712;Note=SDY1712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1712
NC_007606.1	RefSeq	CDS	1564435	1566345	.	-	0	ID=cds1498;Parent=gene1679;Dbxref=Genbank:YP_403323.1,GeneID:3796276;Name=YP_403323.1;Note=Code: KL%3B COG: COG1199;gbkey=CDS;product=DNA helicase;protein_id=YP_403323.1;transl_table=11
NC_007606.1	RefSeq	gene	1566429	1566821	.	+	.	ID=gene1680;Dbxref=GeneID:3796277;Name=SDY_1713;Note=SDY1713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1713
NC_007606.1	RefSeq	CDS	1566429	1566821	.	+	0	ID=cds1499;Parent=gene1680;Dbxref=Genbank:YP_403324.1,GeneID:3796277;Name=YP_403324.1;Note=Code: J%3B COG: COG0251;gbkey=CDS;product=hypothetical protein;protein_id=YP_403324.1;transl_table=11
NC_007606.1	RefSeq	region	1566968	1567735	.	+	.	ID=id299;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1567023	1567298	.	+	.	ID=gene1681;Dbxref=GeneID:3796278;Name=insA;Note=SDY1714;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1714
NC_007606.1	RefSeq	CDS	1567023	1567298	.	+	0	ID=cds1500;Parent=gene1681;Dbxref=Genbank:YP_403325.1,GeneID:3796278;Name=YP_403325.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403325.1;transl_table=11
NC_007606.1	RefSeq	gene	1567343	1567720	.	+	.	ID=gene1682;Dbxref=GeneID:3796279;Name=insB;Note=SDY1715;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1715
NC_007606.1	RefSeq	CDS	1567343	1567720	.	+	0	ID=cds1501;Parent=gene1682;Dbxref=Genbank:YP_403326.1,GeneID:3796279;Name=YP_403326.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403326.1;transl_table=11
NC_007606.1	RefSeq	gene	1568439	1568618	.	-	.	ID=gene1683;Dbxref=GeneID:3796281;Name=SDY_1717;Note=SDY1717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1717
NC_007606.1	RefSeq	CDS	1568439	1568618	.	-	0	ID=cds1502;Parent=gene1683;Dbxref=Genbank:YP_403328.1,GeneID:3796281;Name=YP_403328.1;Note=Code: S%3B COG: COG3140;gbkey=CDS;product=hypothetical protein;protein_id=YP_403328.1;transl_table=11
NC_007606.1	RefSeq	gene	1568692	1570053	.	+	.	ID=gene1684;Dbxref=GeneID:3796282;Name=pabB;Note=SDY1718;gbkey=Gene;gene=pabB;gene_biotype=protein_coding;locus_tag=SDY_1718
NC_007606.1	RefSeq	CDS	1568692	1570053	.	+	0	ID=cds1503;Parent=gene1684;Dbxref=Genbank:YP_403329.1,GeneID:3796282;Name=YP_403329.1;Note=Code: EH%3B COG: COG0147;gbkey=CDS;gene=pabB;product=para-aminobenzoate synthase component I;protein_id=YP_403329.1;transl_table=11
NC_007606.1	RefSeq	gene	1570057	1570635	.	+	.	ID=gene1685;Dbxref=GeneID:3796283;Name=yeaB;Note=SDY1719;gbkey=Gene;gene=yeaB;gene_biotype=protein_coding;locus_tag=SDY_1719
NC_007606.1	RefSeq	CDS	1570057	1570635	.	+	0	ID=cds1504;Parent=gene1685;Dbxref=Genbank:YP_403330.1,GeneID:3796283;Name=YP_403330.1;Note=Code: LR%3B COG: COG0494;gbkey=CDS;gene=yeaB;product=hypothetical protein;protein_id=YP_403330.1;transl_table=11
NC_007606.1	RefSeq	gene	1570819	1572183	.	+	.	ID=gene1686;Dbxref=GeneID:3796284;Name=sdaA;Note=SDY1720;gbkey=Gene;gene=sdaA;gene_biotype=protein_coding;locus_tag=SDY_1720
NC_007606.1	RefSeq	CDS	1570819	1572183	.	+	0	ID=cds1505;Parent=gene1686;Dbxref=Genbank:YP_403331.1,GeneID:3796284;Name=YP_403331.1;Note=Code: E%3B COG: COG1760;gbkey=CDS;gene=sdaA;product=L-serine deaminase;protein_id=YP_403331.1;transl_table=11
NC_007606.1	RefSeq	region	1572498	1573265	.	+	.	ID=id300;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1572553	1572828	.	+	.	ID=gene1687;Dbxref=GeneID:3796285;Name=insA;Note=SDY1721;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1721
NC_007606.1	RefSeq	CDS	1572553	1572828	.	+	0	ID=cds1506;Parent=gene1687;Dbxref=Genbank:YP_403332.1,GeneID:3796285;Name=YP_403332.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403332.1;transl_table=11
NC_007606.1	RefSeq	gene	1572873	1573250	.	+	.	ID=gene1688;Dbxref=GeneID:3796286;Name=insB;Note=SDY1722;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1722
NC_007606.1	RefSeq	CDS	1572873	1573250	.	+	0	ID=cds1507;Parent=gene1688;Dbxref=Genbank:YP_403333.1,GeneID:3796286;Name=YP_403333.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403333.1;transl_table=11
NC_007606.1	RefSeq	gene	1573185	1573496	.	-	.	ID=gene1689;Dbxref=GeneID:3796287;Name=SDY_1723;Note=SDY1723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1723
NC_007606.1	RefSeq	CDS	1573185	1573496	.	-	0	ID=cds1508;Parent=gene1689;Dbxref=Genbank:YP_403334.1,GeneID:3796287;Name=YP_403334.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403334.1;transl_table=11
NC_007606.1	RefSeq	gene	1573694	1574824	.	-	.	ID=gene1690;Dbxref=GeneID:3796288;Name=yncB;Note=SDY1724;gbkey=Gene;gene=yncB;gene_biotype=protein_coding;locus_tag=SDY_1724
NC_007606.1	RefSeq	CDS	1573694	1574824	.	-	0	ID=cds1509;Parent=gene1690;Dbxref=Genbank:YP_403335.1,GeneID:3796288;Name=YP_403335.1;Note=Code: R%3B COG: COG2130;gbkey=CDS;gene=yncB;product=oxidoreductase;protein_id=YP_403335.1;transl_table=11
NC_007606.1	RefSeq	gene	1574909	1575427	.	+	.	ID=gene1691;Dbxref=GeneID:3796289;Name=SDY_1725;Note=SDY1725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1725
NC_007606.1	RefSeq	CDS	1574909	1575427	.	+	0	ID=cds1510;Parent=gene1691;Dbxref=Genbank:YP_403336.1,GeneID:3796289;Name=YP_403336.1;Note=Code: M%3B COG: COG1247;gbkey=CDS;product=resistance protein;protein_id=YP_403336.1;transl_table=11
NC_007606.1	RefSeq	gene	1575424	1575873	.	+	.	ID=gene1692;Dbxref=GeneID:3796290;Name=SDY_1726;Note=SDY1726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1726
NC_007606.1	RefSeq	CDS	1575424	1575873	.	+	0	ID=cds1511;Parent=gene1692;Dbxref=Genbank:YP_403337.1,GeneID:3796290;Name=YP_403337.1;Note=Code: S%3B COG: COG3238;gbkey=CDS;product=hypothetical protein;protein_id=YP_403337.1;transl_table=11
NC_007606.1	RefSeq	region	1576039	1576804	.	-	.	ID=id301;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1576053	1576448	.	-	.	ID=gene1693;Dbxref=GeneID:3796291;Name=SDY_1727;Note=SDY1727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1727
NC_007606.1	RefSeq	CDS	1576053	1576448	.	-	0	ID=cds1512;Parent=gene1693;Dbxref=Genbank:YP_403338.1,GeneID:3796291;Name=YP_403338.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403338.1;transl_table=11
NC_007606.1	RefSeq	gene	1576475	1576747	.	-	.	ID=gene1694;Dbxref=GeneID:18263049;Name=SDY_4665;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4665
NC_007606.1	RefSeq	CDS	1576475	1576747	.	-	0	ID=cds1513;Parent=gene1694;Dbxref=Genbank:YP_009000735.1,GeneID:18263049;Name=YP_009000735.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000735.1;transl_table=11
NC_007606.1	RefSeq	gene	1576967	1577140	.	-	.	ID=gene1695;Dbxref=GeneID:3796293;Name=SDY_1729;Note=SDY1729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1729
NC_007606.1	RefSeq	CDS	1576967	1577140	.	-	0	ID=cds1514;Parent=gene1695;Dbxref=Genbank:YP_403340.2,GeneID:3796293;Name=YP_403340.2;gbkey=CDS;product=hypothetical protein;protein_id=YP_403340.2;transl_table=11
NC_007606.1	RefSeq	gene	1577527	1578951	.	-	.	ID=gene1696;Dbxref=GeneID:3796294;Name=SDY_1730;Note=SDY1730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1730
NC_007606.1	RefSeq	CDS	1577527	1578951	.	-	0	ID=cds1515;Parent=gene1696;Dbxref=Genbank:YP_403341.1,GeneID:3796294;Name=YP_403341.1;Note=catalyzes the formation of 4-aminobutanoate from 4-aminobutanal%3B involved in putrescine degradation;gbkey=CDS;product=gamma-aminobutyraldehyde dehydrogenase;protein_id=YP_403341.1;transl_table=11
NC_007606.1	RefSeq	gene	1578973	1579679	.	-	.	ID=gene1697;Dbxref=GeneID:3796295;Name=SDY_1731;Note=SDY1731%3B frameshift%3B original product:  transport system permease;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1731;pseudo=true
NC_007606.1	RefSeq	gene	1579669	1580609	.	-	.	ID=gene1698;Dbxref=GeneID:3796296;Name=SDY_1732;Note=SDY1732%3B frameshift%3B original product:  transport system permease;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1732;pseudo=true
NC_007606.1	RefSeq	gene	1580610	1581623	.	-	.	ID=gene1699;Dbxref=GeneID:3796297;Name=SDY_1733;Note=SDY1733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1733
NC_007606.1	RefSeq	CDS	1580610	1581623	.	-	0	ID=cds1516;Parent=gene1699;Dbxref=Genbank:YP_403342.1,GeneID:3796297;Name=YP_403342.1;Note=Code: E%3B COG: COG3842;gbkey=CDS;product=ATPase;protein_id=YP_403342.1;transl_table=11
NC_007606.1	RefSeq	gene	1581641	1582786	.	-	.	ID=gene1700;Dbxref=GeneID:3796298;Name=SDY_1734;Note=SDY1734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1734
NC_007606.1	RefSeq	CDS	1581641	1582786	.	-	0	ID=cds1517;Parent=gene1700;Dbxref=Genbank:YP_403343.1,GeneID:3796298;Name=YP_403343.1;Note=Code: E%3B COG: COG0687;gbkey=CDS;product=transport protein;protein_id=YP_403343.1;transl_table=11
NC_007606.1	RefSeq	gene	1583031	1584437	.	-	.	ID=gene1701;Dbxref=GeneID:3796299;Name=SDY_1735;Note=SDY1735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1735
NC_007606.1	RefSeq	CDS	1583031	1584437	.	-	0	ID=cds1518;Parent=gene1701;Dbxref=Genbank:YP_403344.1,GeneID:3796299;Name=YP_403344.1;Note=Code: KE%3B COG: COG1167;gbkey=CDS;product=transcriptional regulator;protein_id=YP_403344.1;transl_table=11
NC_007606.1	RefSeq	gene	1584516	1584953	.	-	.	ID=gene1702;Dbxref=GeneID:3796300;Name=SDY_1736;Note=SDY1736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1736
NC_007606.1	RefSeq	CDS	1584516	1584953	.	-	0	ID=cds1519;Parent=gene1702;Dbxref=Genbank:YP_403345.1,GeneID:3796300;Name=YP_403345.1;Note=Code: S%3B COG: COG1598;gbkey=CDS;product=hypothetical protein;protein_id=YP_403345.1;transl_table=11
NC_007606.1	RefSeq	region	1585232	1586002	.	-	.	ID=id302;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1585246	1585641	.	-	.	ID=gene1703;Dbxref=GeneID:3796302;Name=SDY_1738;Note=SDY1738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1738
NC_007606.1	RefSeq	CDS	1585246	1585641	.	-	0	ID=cds1520;Parent=gene1703;Dbxref=Genbank:YP_403347.1,GeneID:3796302;Name=YP_403347.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403347.1;transl_table=11
NC_007606.1	RefSeq	gene	1585668	1585940	.	-	.	ID=gene1704;Dbxref=GeneID:18263050;Name=SDY_4666;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4666
NC_007606.1	RefSeq	CDS	1585668	1585940	.	-	0	ID=cds1521;Parent=gene1704;Dbxref=Genbank:YP_009000736.1,GeneID:18263050;Name=YP_009000736.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000736.1;transl_table=11
NC_007606.1	RefSeq	gene	1586198	1587835	.	-	.	ID=gene1705;Dbxref=GeneID:3796304;Name=ydcP;Note=SDY1740;gbkey=Gene;gene=ydcP;gene_biotype=protein_coding;locus_tag=SDY_1740
NC_007606.1	RefSeq	CDS	1586198	1587835	.	-	0	ID=cds1522;Parent=gene1705;Dbxref=Genbank:YP_403349.1,GeneID:3796304;Name=YP_403349.1;Note=Code: O%3B COG: COG0826;gbkey=CDS;gene=ydcP;product=collagenase;protein_id=YP_403349.1;transl_table=11
NC_007606.1	RefSeq	gene	1587866	1588402	.	-	.	ID=gene1706;Dbxref=GeneID:3796306;Name=ydcN;Note=SDY1742;gbkey=Gene;gene=ydcN;gene_biotype=protein_coding;locus_tag=SDY_1742
NC_007606.1	RefSeq	CDS	1587866	1588402	.	-	0	ID=cds1523;Parent=gene1706;Dbxref=Genbank:YP_403350.1,GeneID:3796306;Name=YP_403350.1;Note=Code: K%3B COG: COG1396;gbkey=CDS;gene=ydcN;product=hypothetical protein;protein_id=YP_403350.1;transl_table=11
NC_007606.1	RefSeq	gene	1588401	1589647	.	+	.	ID=gene1707;Dbxref=GeneID:3796305;Name=SDY_1741;Note=SDY1741%3B frameshift%3B original product:  membrane transport protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1741;pseudo=true
NC_007606.1	RefSeq	region	1589891	1590654	.	-	.	ID=id303;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1589902	1590279	.	-	.	ID=gene1708;Dbxref=GeneID:3796308;Name=insB;Note=SDY1744;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1744
NC_007606.1	RefSeq	CDS	1589902	1590279	.	-	0	ID=cds1524;Parent=gene1708;Dbxref=Genbank:YP_403352.1,GeneID:3796308;Name=YP_403352.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403352.1;transl_table=11
NC_007606.1	RefSeq	gene	1590324	1590599	.	-	.	ID=gene1709;Dbxref=GeneID:3796309;Name=insA;Note=SDY1745;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1745
NC_007606.1	RefSeq	CDS	1590324	1590599	.	-	0	ID=cds1525;Parent=gene1709;Dbxref=Genbank:YP_403353.1,GeneID:3796309;Name=YP_403353.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403353.1;transl_table=11
NC_007606.1	RefSeq	gene	1590628	1590966	.	-	.	ID=gene1710;Dbxref=GeneID:3796310;Name=SDY_1746;Note=SDY1746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1746
NC_007606.1	RefSeq	CDS	1590628	1590966	.	-	0	ID=cds1526;Parent=gene1710;Dbxref=Genbank:YP_403354.1,GeneID:3796310;Name=YP_403354.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403354.1;transl_table=11
NC_007606.1	RefSeq	gene	1591269	1591862	.	-	.	ID=gene1711;Dbxref=GeneID:3796311;Name=tehB;Note=SDY1747;gbkey=Gene;gene=tehB;gene_biotype=protein_coding;locus_tag=SDY_1747
NC_007606.1	RefSeq	CDS	1591269	1591862	.	-	0	ID=cds1527;Parent=gene1711;Dbxref=Genbank:YP_403355.1,GeneID:3796311;Name=YP_403355.1;Note=with TehA confers resistance to tellurite;gbkey=CDS;gene=tehB;product=tellurite resistance protein TehB;protein_id=YP_403355.1;transl_table=11
NC_007606.1	RefSeq	gene	1591859	1592839	.	-	.	ID=gene1712;Dbxref=GeneID:3796312;Name=tehA;Note=SDY1748;gbkey=Gene;gene=tehA;gene_biotype=protein_coding;locus_tag=SDY_1748
NC_007606.1	RefSeq	CDS	1591859	1592839	.	-	0	ID=cds1528;Parent=gene1712;Dbxref=Genbank:YP_403356.1,GeneID:3796312;Name=YP_403356.1;Note=Code: P%3B COG: COG1275;gbkey=CDS;gene=tehA;product=potassium-tellurite ethidium and proflavin transporter;protein_id=YP_403356.1;transl_table=11
NC_007606.1	RefSeq	gene	1592963	1593944	.	+	.	ID=gene1713;Dbxref=GeneID:3796313;Name=SDY_1749;Note=SDY1749;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1749;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1593936	1594475	.	-	.	ID=gene1714;Dbxref=GeneID:3796315;Name=rimL;Note=SDY1751;gbkey=Gene;gene=rimL;gene_biotype=protein_coding;locus_tag=SDY_1751;pseudogene=unknown
NC_007606.1	RefSeq	CDS	1593936	1594475	.	-	0	ID=cds1529;Parent=gene1714;Dbxref=Genbank:YP_403359.1,GeneID:3796315;Name=YP_403359.1;Note=Code: J%3B COG: COG1670;gbkey=CDS;gene=rimL;product=ribosomal-protein-L7/L12-serine acetyltransferase;protein_id=YP_403359.1;transl_table=11
NC_007606.1	RefSeq	gene	1594538	1594705	.	-	.	ID=gene1715;Dbxref=GeneID:3796316;Name=ydcH;Note=SDY1752;gbkey=Gene;gene=ydcH;gene_biotype=protein_coding;locus_tag=SDY_1752
NC_007606.1	RefSeq	CDS	1594538	1594705	.	-	0	ID=cds1530;Parent=gene1715;Dbxref=Genbank:YP_403360.1,GeneID:3796316;Name=YP_403360.1;Note=Code: S%3B COG: COG2841;gbkey=CDS;gene=ydcH;product=hypothetical protein;protein_id=YP_403360.1;transl_table=11
NC_007606.1	RefSeq	region	1594748	1595515	.	+	.	ID=id304;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1594803	1595078	.	+	.	ID=gene1716;Dbxref=GeneID:3796317;Name=insA;Note=SDY1753;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1753
NC_007606.1	RefSeq	CDS	1594803	1595078	.	+	0	ID=cds1531;Parent=gene1716;Dbxref=Genbank:YP_403361.1,GeneID:3796317;Name=YP_403361.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403361.1;transl_table=11
NC_007606.1	RefSeq	gene	1595123	1595500	.	+	.	ID=gene1717;Dbxref=GeneID:3796318;Name=insB;Note=SDY1754;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1754
NC_007606.1	RefSeq	CDS	1595123	1595500	.	+	0	ID=cds1532;Parent=gene1717;Dbxref=Genbank:YP_403362.1,GeneID:3796318;Name=YP_403362.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403362.1;transl_table=11
NC_007606.1	RefSeq	gene	1595679	1597334	.	-	.	ID=gene1718;Dbxref=GeneID:3796320;Name=mdoD;Note=SDY1756;gbkey=Gene;gene=mdoD;gene_biotype=protein_coding;gene_synonym=opgD;locus_tag=SDY_1756
NC_007606.1	RefSeq	CDS	1595679	1597334	.	-	0	ID=cds1533;Parent=gene1718;Dbxref=Genbank:YP_403364.1,GeneID:3796320;Name=YP_403364.1;Note=involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans;gbkey=CDS;gene=mdoD;product=glucan biosynthesis protein D;protein_id=YP_403364.1;transl_table=11
NC_007606.1	RefSeq	gene	1597559	1598902	.	-	.	ID=gene1719;Dbxref=GeneID:3796321;Name=SDY_1757;Note=SDY1757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1757
NC_007606.1	RefSeq	CDS	1597559	1598902	.	-	0	ID=cds1534;Parent=gene1719;Dbxref=Genbank:YP_403365.1,GeneID:3796321;Name=YP_403365.1;Note=Code: S%3B COG: COG5383;gbkey=CDS;product=hypothetical protein;protein_id=YP_403365.1;transl_table=11
NC_007606.1	RefSeq	gene	1598978	1600033	.	+	.	ID=gene1720;Dbxref=GeneID:3796322;Name=SDY_1758;Note=SDY1758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1758
NC_007606.1	RefSeq	CDS	1598978	1600033	.	+	0	ID=cds1535;Parent=gene1720;Dbxref=Genbank:YP_403366.1,GeneID:3796322;Name=YP_403366.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;product=LysR family transcriptional regulator;protein_id=YP_403366.1;transl_table=11
NC_007606.1	RefSeq	region	1600012	1600777	.	+	.	ID=id305;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1600069	1600341	.	+	.	ID=gene1721;Dbxref=GeneID:18263051;Name=SDY_4667;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4667
NC_007606.1	RefSeq	CDS	1600069	1600341	.	+	0	ID=cds1536;Parent=gene1721;Dbxref=Genbank:YP_009000737.1,GeneID:18263051;Name=YP_009000737.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000737.1;transl_table=11
NC_007606.1	RefSeq	gene	1600368	1600763	.	+	.	ID=gene1722;Dbxref=GeneID:3796323;Name=SDY_1759;Note=SDY1759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1759
NC_007606.1	RefSeq	CDS	1600368	1600763	.	+	0	ID=cds1537;Parent=gene1722;Dbxref=Genbank:YP_403367.1,GeneID:3796323;Name=YP_403367.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403367.1;transl_table=11
NC_007606.1	RefSeq	gene	1600836	1602269	.	-	.	ID=gene1723;Dbxref=GeneID:3796324;Name=trg;Note=SDY1760;gbkey=Gene;gene=trg;gene_biotype=protein_coding;locus_tag=SDY_1760
NC_007606.1	RefSeq	CDS	1600836	1602269	.	-	0	ID=cds1538;Parent=gene1723;Dbxref=Genbank:YP_403368.1,GeneID:3796324;Name=YP_403368.1;Note=Code: NT%3B COG: COG0840;gbkey=CDS;gene=trg;product=methyl-accepting chemotaxis protein III;protein_id=YP_403368.1;transl_table=11
NC_007606.1	RefSeq	region	1602305	1603075	.	-	.	ID=id306;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1602320	1602715	.	-	.	ID=gene1724;Dbxref=GeneID:3796325;Name=SDY_1761;Note=SDY1761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1761
NC_007606.1	RefSeq	CDS	1602320	1602715	.	-	0	ID=cds1539;Parent=gene1724;Dbxref=Genbank:YP_403369.1,GeneID:3796325;Name=YP_403369.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403369.1;transl_table=11
NC_007606.1	RefSeq	gene	1602742	1603014	.	-	.	ID=gene1725;Dbxref=GeneID:18263052;Name=SDY_4668;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4668
NC_007606.1	RefSeq	CDS	1602742	1603014	.	-	0	ID=cds1540;Parent=gene1725;Dbxref=Genbank:YP_009000738.1,GeneID:18263052;Name=YP_009000738.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000738.1;transl_table=11
NC_007606.1	RefSeq	gene	1603591	1603758	.	+	.	ID=gene1726;Dbxref=GeneID:3796326;Name=SDY_1762;Note=SDY1762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1762
NC_007606.1	RefSeq	CDS	1603591	1603758	.	+	0	ID=cds1541;Parent=gene1726;Dbxref=Genbank:YP_403370.1,GeneID:3796326;Name=YP_403370.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403370.1;transl_table=11
NC_007606.1	RefSeq	gene	1603870	1604043	.	-	.	ID=gene1727;Dbxref=GeneID:3796327;Name=ydcA;Note=SDY1763;gbkey=Gene;gene=ydcA;gene_biotype=protein_coding;locus_tag=SDY_1763
NC_007606.1	RefSeq	CDS	1603870	1604043	.	-	0	ID=cds1542;Parent=gene1727;Dbxref=Genbank:YP_403371.1,GeneID:3796327;Name=YP_403371.1;gbkey=CDS;gene=ydcA;product=hypothetical protein;protein_id=YP_403371.1;transl_table=11
NC_007606.1	RefSeq	gene	1604288	1604818	.	-	.	ID=gene1728;Dbxref=GeneID:3796328;Name=cybB;Note=SDY1764;gbkey=Gene;gene=cybB;gene_biotype=protein_coding;locus_tag=SDY_1764
NC_007606.1	RefSeq	CDS	1604288	1604818	.	-	0	ID=cds1543;Parent=gene1728;Dbxref=Genbank:YP_403372.2,GeneID:3796328;Name=YP_403372.2;Note=B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm;gbkey=CDS;gene=cybB;product=cytochrome b561;protein_id=YP_403372.2;transl_table=11
NC_007606.1	RefSeq	gene	1605007	1606009	.	+	.	ID=gene1729;Dbxref=GeneID:3796329;Name=gapC;Note=SDY1765%3B frameshift%3B original product: Glyceraldehyde-3-phosphate dehydrogenase;gbkey=Gene;gene=gapC;gene_biotype=pseudogene;locus_tag=SDY_1765;pseudo=true
NC_007606.1	RefSeq	gene	1606051	1607058	.	-	.	ID=gene1730;Dbxref=GeneID:3796330;Name=aldA;Note=''SDY1766%3B contains in-frame stop codon%3B original product: aldehyde dehydrogenase%2C NAD-linked'';gbkey=Gene;gene=aldA;gene_biotype=pseudogene;locus_tag=SDY_1766;pseudo=true
NC_007606.1	RefSeq	region	1607065	1608328	.	-	.	ID=id307;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1607962	1608264	.	-	.	ID=gene1731;Dbxref=GeneID:3796332;Name=SDY_1768;Note=SDY1768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1768
NC_007606.1	RefSeq	CDS	1607962	1608264	.	-	0	ID=cds1544;Parent=gene1731;Dbxref=Genbank:YP_403374.1,GeneID:3796332;Name=YP_403374.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403374.1;transl_table=11
NC_007606.1	RefSeq	region	1608998	1609763	.	-	.	ID=id308;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1609012	1609227	.	-	.	ID=gene1732;Dbxref=GeneID:3796333;Name=SDY_1769;Note=SDY1769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1769
NC_007606.1	RefSeq	CDS	1609012	1609227	.	-	0	ID=cds1545;Parent=gene1732;Dbxref=Genbank:YP_403375.1,GeneID:3796333;Name=YP_403375.1;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403375.1;transl_table=11
NC_007606.1	RefSeq	gene	1609434	1609706	.	-	.	ID=gene1733;Dbxref=GeneID:18263053;Name=SDY_4669;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4669
NC_007606.1	RefSeq	CDS	1609434	1609706	.	-	0	ID=cds1546;Parent=gene1733;Dbxref=Genbank:YP_009000739.1,GeneID:18263053;Name=YP_009000739.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000739.1;transl_table=11
NC_007606.1	RefSeq	gene	1609746	1610159	.	-	.	ID=gene1734;Dbxref=GeneID:3796334;Name=SDY_1770;Note=SDY1770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1770
NC_007606.1	RefSeq	CDS	1609746	1610159	.	-	0	ID=cds1547;Parent=gene1734;Dbxref=Genbank:YP_403376.1,GeneID:3796334;Name=YP_403376.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403376.1;transl_table=11
NC_007606.1	RefSeq	region	1610335	1611102	.	+	.	ID=id309;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1610390	1610665	.	+	.	ID=gene1735;Dbxref=GeneID:3796335;Name=insA;Note=SDY1771;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1771
NC_007606.1	RefSeq	CDS	1610390	1610665	.	+	0	ID=cds1548;Parent=gene1735;Dbxref=Genbank:YP_403377.1,GeneID:3796335;Name=YP_403377.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403377.1;transl_table=11
NC_007606.1	RefSeq	gene	1610710	1611087	.	+	.	ID=gene1736;Dbxref=GeneID:3796336;Name=insB;Note=SDY1772;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1772
NC_007606.1	RefSeq	CDS	1610710	1611087	.	+	0	ID=cds1549;Parent=gene1736;Dbxref=Genbank:YP_403378.1,GeneID:3796336;Name=YP_403378.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403378.1;transl_table=11
NC_007606.1	RefSeq	gene	1611837	1615682	.	-	.	ID=gene1737;Dbxref=GeneID:3796338;Name=hrpA;Note=SDY1774;gbkey=Gene;gene=hrpA;gene_biotype=protein_coding;locus_tag=SDY_1774
NC_007606.1	RefSeq	CDS	1611837	1615682	.	-	0	ID=cds1550;Parent=gene1737;Dbxref=Genbank:YP_403380.1,GeneID:3796338;Name=YP_403380.1;Note=''involved in the post-transcriptional processing of the daa operon mRNA%2C which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain'';gbkey=CDS;gene=hrpA;product=ATP-dependent RNA helicase HrpA;protein_id=YP_403380.1;transl_table=11
NC_007606.1	RefSeq	gene	1615940	1616545	.	+	.	ID=gene1738;Dbxref=GeneID:3796339;Name=acpD;Note=SDY1775;gbkey=Gene;gene=acpD;gene_biotype=protein_coding;locus_tag=SDY_1775
NC_007606.1	RefSeq	CDS	1615940	1616545	.	+	0	ID=cds1551;Parent=gene1738;Dbxref=Genbank:YP_403381.1,GeneID:3796339;Name=YP_403381.1;Note=FMN-dependent%3B requires NADH%3B catalyzes the cleavage of azo bond in aromatic azo compounds;gbkey=CDS;gene=acpD;product=azoreductase;protein_id=YP_403381.1;transl_table=11
NC_007606.1	RefSeq	gene	1616599	1617624	.	-	.	ID=gene1739;Dbxref=GeneID:3796340;Name=ynbD;Note=SDY1776;gbkey=Gene;gene=ynbD;gene_biotype=protein_coding;locus_tag=SDY_1776
NC_007606.1	RefSeq	CDS	1616599	1617624	.	-	0	ID=cds1552;Parent=gene1739;Dbxref=Genbank:YP_403382.1,GeneID:3796340;Name=YP_403382.1;Note=Code: I%3B COG: COG0671;gbkey=CDS;gene=ynbD;product=protein YnbD;protein_id=YP_403382.1;transl_table=11
NC_007606.1	RefSeq	gene	1617624	1617860	.	-	.	ID=gene1740;Dbxref=GeneID:3796341;Name=SDY_1777;Note=SDY1777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1777
NC_007606.1	RefSeq	CDS	1617624	1617860	.	-	0	ID=cds1553;Parent=gene1740;Dbxref=Genbank:YP_403383.1,GeneID:3796341;Name=YP_403383.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403383.1;transl_table=11
NC_007606.1	RefSeq	region	1617699	1618464	.	+	.	ID=id310;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1617756	1618028	.	+	.	ID=gene1741;Dbxref=GeneID:18263054;Name=SDY_4670;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4670
NC_007606.1	RefSeq	CDS	1617756	1618028	.	+	0	ID=cds1554;Parent=gene1741;Dbxref=Genbank:YP_009000740.1,GeneID:18263054;Name=YP_009000740.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000740.1;transl_table=11
NC_007606.1	RefSeq	gene	1618055	1618450	.	+	.	ID=gene1742;Dbxref=GeneID:3796342;Name=SDY_1778;Note=SDY1778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1778
NC_007606.1	RefSeq	CDS	1618055	1618450	.	+	0	ID=cds1555;Parent=gene1742;Dbxref=Genbank:YP_403384.1,GeneID:3796342;Name=YP_403384.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403384.1;transl_table=11
NC_007606.1	RefSeq	gene	1618679	1620436	.	-	.	ID=gene1743;Dbxref=GeneID:3796343;Name=SDY_1779;Note=SDY1779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1779
NC_007606.1	RefSeq	CDS	1618679	1620436	.	-	0	ID=cds1556;Parent=gene1743;Dbxref=Genbank:YP_403385.1,GeneID:3796343;Name=YP_403385.1;Note=Code: QR%3B COG: COG0500;gbkey=CDS;product=hypothetical protein;protein_id=YP_403385.1;transl_table=11
NC_007606.1	RefSeq	gene	1620442	1621346	.	-	.	ID=gene1744;Dbxref=GeneID:3796188;Name=SDY_1780;Note=SDY1780%3B contains in-frame stop codon%3B original product:  phosphatidate cytidiltransferase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1780;pseudo=true
NC_007606.1	RefSeq	region	1621385	1621652	.	-	.	ID=id311;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	1621640	1622110	.	-	.	ID=id312;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1621773	1622045	.	-	.	ID=gene1745;Dbxref=GeneID:18263055;Name=SDY_4671;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4671
NC_007606.1	RefSeq	CDS	1621773	1622045	.	-	0	ID=cds1557;Parent=gene1745;Dbxref=Genbank:YP_009000741.1,GeneID:18263055;Name=YP_009000741.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000741.1;transl_table=11
NC_007606.1	RefSeq	gene	1622393	1623544	.	+	.	ID=gene1746;Dbxref=GeneID:3796191;Name=SDY_1783;Note=SDY1783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1783
NC_007606.1	RefSeq	CDS	1622393	1623544	.	+	0	ID=cds1558;Parent=gene1746;Dbxref=Genbank:YP_403388.2,GeneID:3796191;Name=YP_403388.2;Note=may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain;gbkey=CDS;product=acyl-CoA dehydrogenase;protein_id=YP_403388.2;transl_table=11
NC_007606.1	RefSeq	gene	1623587	1624720	.	-	.	ID=gene1747;Dbxref=GeneID:3796192;Name=SDY_1784;Note=SDY1784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1784
NC_007606.1	RefSeq	CDS	1623587	1624720	.	-	0	ID=cds1559;Parent=gene1747;Dbxref=Genbank:YP_403389.1,GeneID:3796192;Name=YP_403389.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=fused IS600 integrase core domain-containing protein/HTH-type transcriptional regulator;protein_id=YP_403389.1;transl_table=11
NC_007606.1	RefSeq	region	1623962	1625227	.	-	.	ID=id313;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1624861	1625163	.	-	.	ID=gene1748;Dbxref=GeneID:3796193;Name=SDY_1785;Note=SDY1785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1785
NC_007606.1	RefSeq	CDS	1624861	1625163	.	-	0	ID=cds1560;Parent=gene1748;Dbxref=Genbank:YP_403390.1,GeneID:3796193;Name=YP_403390.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403390.1;transl_table=11
NC_007606.1	RefSeq	gene	1625225	1625767	.	-	.	ID=gene1749;Dbxref=GeneID:3796194;Name=SDY_1786;Note=SDY1786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1786
NC_007606.1	RefSeq	CDS	1625225	1625767	.	-	0	ID=cds1561;Parent=gene1749;Dbxref=Genbank:YP_403391.1,GeneID:3796194;Name=YP_403391.1;Note=Code: K%3B COG: COG2207;gbkey=CDS;product=AraC family transcriptional regulator;protein_id=YP_403391.1;transl_table=11
NC_007606.1	RefSeq	gene	1626083	1628114	.	+	.	ID=gene1750;Dbxref=GeneID:3796195;Name=ydiQ;Note=SDY1787%3B contains IS600 insertion%3B original product:  transport protein;gbkey=Gene;gene=ydiQ;gene_biotype=pseudogene;locus_tag=SDY_1787;pseudo=true
NC_007606.1	RefSeq	region	1626589	1627852	.	-	.	ID=id314;gbkey=mobile_element;gene=ydiQ
NC_007606.1	RefSeq	gene	1627486	1627788	.	-	.	ID=gene1751;Dbxref=GeneID:3796197;Name=SDY_1789;Note=SDY1789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1789
NC_007606.1	RefSeq	CDS	1627486	1627788	.	-	0	ID=cds1562;Parent=gene1751;Dbxref=Genbank:YP_403393.1,GeneID:3796197;Name=YP_403393.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403393.1;transl_table=11
NC_007606.1	RefSeq	gene	1628134	1629072	.	+	.	ID=gene1752;Dbxref=GeneID:3796198;Name=ydiR;Note=SDY1790%3B contains in-frame stop codon%3B original product:  flavoprotein;gbkey=Gene;gene=ydiR;gene_biotype=pseudogene;locus_tag=SDY_1790;pseudo=true
NC_007606.1	RefSeq	gene	1629127	1630416	.	+	.	ID=gene1753;Dbxref=GeneID:3796199;Name=ydiS;Note=SDY1791;gbkey=Gene;gene=ydiS;gene_biotype=protein_coding;locus_tag=SDY_1791
NC_007606.1	RefSeq	CDS	1629127	1630416	.	+	0	ID=cds1563;Parent=gene1753;Dbxref=Genbank:YP_403394.1,GeneID:3796199;Name=YP_403394.1;Note=Code: C%3B COG: COG0644;gbkey=CDS;gene=ydiS;product=hypothetical protein;protein_id=YP_403394.1;transl_table=11
NC_007606.1	RefSeq	gene	1630413	1630706	.	+	.	ID=gene1754;Dbxref=GeneID:3796200;Name=ydiT;Note=SDY1792;gbkey=Gene;gene=ydiT;gene_biotype=protein_coding;locus_tag=SDY_1792
NC_007606.1	RefSeq	CDS	1630413	1630706	.	+	0	ID=cds1564;Parent=gene1754;Dbxref=Genbank:YP_403395.1,GeneID:3796200;Name=YP_403395.1;Note=Code: C%3B COG: COG2440;gbkey=CDS;gene=ydiT;product=hypothetical protein;protein_id=YP_403395.1;transl_table=11
NC_007606.1	RefSeq	gene	1630763	1632410	.	+	.	ID=gene1755;Dbxref=GeneID:3796201;Name=ydiD;Note=SDY1793%3B contains in-frame stop codon%3B original product:  ligase/synthetase;gbkey=Gene;gene=ydiD;gene_biotype=pseudogene;locus_tag=SDY_1793;pseudo=true
NC_007606.1	RefSeq	gene	1632467	1634845	.	-	.	ID=gene1756;Dbxref=GeneID:3796202;Name=ppsA;Note=SDY1794;gbkey=Gene;gene=ppsA;gene_biotype=protein_coding;locus_tag=SDY_1794
NC_007606.1	RefSeq	CDS	1632467	1634845	.	-	0	ID=cds1565;Parent=gene1756;Dbxref=Genbank:YP_403396.1,GeneID:3796202;Name=YP_403396.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;gene=ppsA;product=phosphoenolpyruvate synthase;protein_id=YP_403396.1;transl_table=11
NC_007606.1	RefSeq	region	1634983	1636314	.	+	.	ID=id315;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1635073	1635438	.	+	.	ID=gene1757;Dbxref=GeneID:3796203;Name=SDY_1795;Note=SDY1795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1795
NC_007606.1	RefSeq	CDS	1635073	1635438	.	+	0	ID=cds1566;Parent=gene1757;Dbxref=Genbank:YP_403397.1,GeneID:3796203;Name=YP_403397.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_403397.1;transl_table=11
NC_007606.1	RefSeq	gene	1636515	1637348	.	+	.	ID=gene1758;Dbxref=GeneID:3796205;Name=ydiA;Note=SDY1797;gbkey=Gene;gene=ydiA;gene_biotype=protein_coding;locus_tag=SDY_1797
NC_007606.1	RefSeq	CDS	1636515	1637348	.	+	0	ID=cds1567;Parent=gene1758;Dbxref=Genbank:YP_403399.1,GeneID:3796205;Name=YP_403399.1;Note=Code: S%3B COG: COG1806;gbkey=CDS;gene=ydiA;product=hypothetical protein;protein_id=YP_403399.1;transl_table=11
NC_007606.1	RefSeq	gene	1637505	1638551	.	+	.	ID=gene1759;Dbxref=GeneID:3796206;Name=aroH;Note=SDY1798;gbkey=Gene;gene=aroH;gene_biotype=protein_coding;locus_tag=SDY_1798
NC_007606.1	RefSeq	CDS	1637505	1638551	.	+	0	ID=cds1568;Parent=gene1759;Dbxref=Genbank:YP_403400.1,GeneID:3796206;Name=YP_403400.1;Note=tryptophan sensitive%3B catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate;gbkey=CDS;gene=aroH;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_403400.1;transl_table=11
NC_007606.1	RefSeq	gene	1638683	1638874	.	+	.	ID=gene1760;Dbxref=GeneID:3796207;Name=ydiE;Note=SDY1799;gbkey=Gene;gene=ydiE;gene_biotype=protein_coding;locus_tag=SDY_1799
NC_007606.1	RefSeq	CDS	1638683	1638874	.	+	0	ID=cds1569;Parent=gene1760;Dbxref=Genbank:YP_403401.1,GeneID:3796207;Name=YP_403401.1;Note=Code: P%3B COG: COG4256;gbkey=CDS;gene=ydiE;product=hypothetical protein;protein_id=YP_403401.1;transl_table=11
NC_007606.1	RefSeq	gene	1638878	1640312	.	-	.	ID=gene1761;Dbxref=GeneID:3795983;Name=SDY_1800;Note=SDY1800;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1800;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1640375	1641088	.	-	.	ID=gene1762;Dbxref=GeneID:3795985;Name=SDY_1802;Note=SDY1802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1802
NC_007606.1	RefSeq	CDS	1640375	1641088	.	-	0	ID=cds1570;Parent=gene1762;Dbxref=Genbank:YP_403404.1,GeneID:3795985;Name=YP_403404.1;Note=Code: T%3B COG: COG2200;gbkey=CDS;product=hypothetical protein;protein_id=YP_403404.1;transl_table=11
NC_007606.1	RefSeq	gene	1641335	1641799	.	-	.	ID=gene1763;Dbxref=GeneID:3795986;Name=nlpC;Note=SDY1803;gbkey=Gene;gene=nlpC;gene_biotype=protein_coding;locus_tag=SDY_1803
NC_007606.1	RefSeq	CDS	1641335	1641799	.	-	0	ID=cds1571;Parent=gene1763;Dbxref=Genbank:YP_403405.1,GeneID:3795986;Name=YP_403405.1;Note=Code: M%3B COG: COG0791;gbkey=CDS;gene=nlpC;product=lipoprotein;protein_id=YP_403405.1;transl_table=11
NC_007606.1	RefSeq	gene	1641877	1642626	.	-	.	ID=gene1764;Dbxref=GeneID:3795987;Name=btuD;Note=SDY1804;gbkey=Gene;gene=btuD;gene_biotype=protein_coding;locus_tag=SDY_1804
NC_007606.1	RefSeq	CDS	1641877	1642626	.	-	0	ID=cds1572;Parent=gene1764;Dbxref=Genbank:YP_403406.1,GeneID:3795987;Name=YP_403406.1;Note=ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell;gbkey=CDS;gene=btuD;product=vitamin B12-transporter ATPase;protein_id=YP_403406.1;transl_table=11
NC_007606.1	RefSeq	gene	1642626	1643177	.	-	.	ID=gene1765;Dbxref=GeneID:3795988;Name=btuE;Note=SDY1805;gbkey=Gene;gene=btuE;gene_biotype=protein_coding;locus_tag=SDY_1805
NC_007606.1	RefSeq	CDS	1642626	1643177	.	-	0	ID=cds1573;Parent=gene1765;Dbxref=Genbank:YP_403407.1,GeneID:3795988;Name=YP_403407.1;Note=similar to glutathione peroxidase%3B member of the btuCED operon which is required for vitamin B12 transport across the inner membrane;gbkey=CDS;gene=btuE;product=glutathione peroxidase;protein_id=YP_403407.1;transl_table=11
NC_007606.1	RefSeq	gene	1643240	1644220	.	-	.	ID=gene1766;Dbxref=GeneID:3795989;Name=btuC;Note=SDY1806;gbkey=Gene;gene=btuC;gene_biotype=protein_coding;locus_tag=SDY_1806
NC_007606.1	RefSeq	CDS	1643240	1644220	.	-	0	ID=cds1574;Parent=gene1766;Dbxref=Genbank:YP_403408.1,GeneID:3795989;Name=YP_403408.1;Note=with BtuD and BtuF transports vitamin B12 into the cell;gbkey=CDS;gene=btuC;product=vtamin B12-transporter permease;protein_id=YP_403408.1;transl_table=11
NC_007606.1	RefSeq	gene	1644321	1644620	.	-	.	ID=gene1767;Dbxref=GeneID:3795990;Name=ihfA;Note=SDY1807;gbkey=Gene;gene=ihfA;gene_biotype=protein_coding;locus_tag=SDY_1807
NC_007606.1	RefSeq	CDS	1644321	1644620	.	-	0	ID=cds1575;Parent=gene1767;Dbxref=Genbank:YP_403409.1,GeneID:3795990;Name=YP_403409.1;Note=''This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control'';gbkey=CDS;gene=ihfA;product=integration host factor subunit alpha;protein_id=YP_403409.1;transl_table=11
NC_007606.1	RefSeq	gene	1644625	1647012	.	-	.	ID=gene1768;Dbxref=GeneID:3795991;Name=pheT;Note=SDY1808;gbkey=Gene;gene=pheT;gene_biotype=protein_coding;locus_tag=SDY_1808
NC_007606.1	RefSeq	CDS	1644625	1647012	.	-	0	ID=cds1576;Parent=gene1768;Dbxref=Genbank:YP_403410.1,GeneID:3795991;Name=YP_403410.1;Note=''catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a tetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 2 subfamily'';gbkey=CDS;gene=pheT;product=phenylalanyl-tRNA synthetase subunit beta;protein_id=YP_403410.1;transl_table=11
NC_007606.1	RefSeq	gene	1647027	1648010	.	-	.	ID=gene1769;Dbxref=GeneID:3795992;Name=pheS;Note=SDY1809;gbkey=Gene;gene=pheS;gene_biotype=protein_coding;locus_tag=SDY_1809
NC_007606.1	RefSeq	CDS	1647027	1648010	.	-	0	ID=cds1577;Parent=gene1769;Dbxref=Genbank:YP_403411.1,GeneID:3795992;Name=YP_403411.1;Note=''catalyzes a two-step reaction%2C first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B forms a heterotetramer of alpha(2)beta(2)%3B binds two magnesium ions per tetramer%3B type 1 subfamily'';gbkey=CDS;gene=pheS;product=phenylalanyl-tRNA synthetase subunit alpha;protein_id=YP_403411.1;transl_table=11
NC_007606.1	RefSeq	gene	1648460	1648816	.	-	.	ID=gene1770;Dbxref=GeneID:3795994;Name=rplT;Note=SDY1811;gbkey=Gene;gene=rplT;gene_biotype=protein_coding;locus_tag=SDY_1811
NC_007606.1	RefSeq	CDS	1648460	1648816	.	-	0	ID=cds1578;Parent=gene1770;Dbxref=Genbank:YP_403413.1,GeneID:3795994;Name=YP_403413.1;Note=binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit;gbkey=CDS;gene=rplT;product=50S ribosomal protein L20;protein_id=YP_403413.1;transl_table=11
NC_007606.1	RefSeq	gene	1648869	1649066	.	-	.	ID=gene1771;Dbxref=GeneID:3795995;Name=rpmI;Note=SDY1812;gbkey=Gene;gene=rpmI;gene_biotype=protein_coding;locus_tag=SDY_1812
NC_007606.1	RefSeq	CDS	1648869	1649066	.	-	0	ID=cds1579;Parent=gene1771;Dbxref=Genbank:YP_403414.1,GeneID:3795995;Name=YP_403414.1;Note=Code: J%3B COG: COG0291;gbkey=CDS;gene=rpmI;product=50S ribosomal protein L35;protein_id=YP_403414.1;transl_table=11
NC_007606.1	RefSeq	gene	1649160	1649702	.	-	.	ID=gene1772;Dbxref=GeneID:3795996;Name=infC;Note=SDY1813;gbkey=Gene;gene=infC;gene_biotype=protein_coding;locus_tag=SDY_1813
NC_007606.1	RefSeq	CDS	1649160	1649702	.	-	0	ID=cds1580;Parent=gene1772;Dbxref=Genbank:YP_403415.2,GeneID:3795996;Name=YP_403415.2;Note=IF-3 has several functions that are required and promote translation initiation including%3B preventing association of 70S by binding to 30S%3B monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites%3B stimulates codon-anticodon interactions at P-site%3B involved in moving mRNA to the P-site%3B and in recycling subunits;gbkey=CDS;gene=infC;product=translation initiation factor IF-3;protein_id=YP_403415.2;transl_table=11
NC_007606.1	RefSeq	gene	1649706	1651634	.	-	.	ID=gene1773;Dbxref=GeneID:3795997;Name=thrS;Note=SDY1814;gbkey=Gene;gene=thrS;gene_biotype=protein_coding;locus_tag=SDY_1814
NC_007606.1	RefSeq	CDS	1649706	1651634	.	-	0	ID=cds1581;Parent=gene1773;Dbxref=Genbank:YP_403416.1,GeneID:3795997;Name=YP_403416.1;Note=''catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr)%3B catalyzes a two-step reaction%2C first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA'';gbkey=CDS;gene=thrS;product=threonyl-tRNA synthetase;protein_id=YP_403416.1;transl_table=11
NC_007606.1	RefSeq	region	1652022	1652787	.	+	.	ID=id316;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1652079	1652351	.	+	.	ID=gene1774;Dbxref=GeneID:18263056;Name=SDY_4672;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4672
NC_007606.1	RefSeq	CDS	1652079	1652351	.	+	0	ID=cds1582;Parent=gene1774;Dbxref=Genbank:YP_009000742.1,GeneID:18263056;Name=YP_009000742.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000742.1;transl_table=11
NC_007606.1	RefSeq	gene	1652378	1652773	.	+	.	ID=gene1775;Dbxref=GeneID:3795998;Name=SDY_1815;Note=SDY1815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1815
NC_007606.1	RefSeq	CDS	1652378	1652773	.	+	0	ID=cds1583;Parent=gene1775;Dbxref=Genbank:YP_403417.1,GeneID:3795998;Name=YP_403417.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403417.1;transl_table=11
NC_007606.1	RefSeq	gene	1652940	1653869	.	+	.	ID=gene1776;Dbxref=GeneID:3795999;Name=pfkB;Note=SDY1816;gbkey=Gene;gene=pfkB;gene_biotype=protein_coding;locus_tag=SDY_1816
NC_007606.1	RefSeq	CDS	1652940	1653869	.	+	0	ID=cds1584;Parent=gene1776;Dbxref=Genbank:YP_403418.1,GeneID:3795999;Name=YP_403418.1;Note=Code: G%3B COG: COG1105;gbkey=CDS;gene=pfkB;product=6-phosphofructokinase;protein_id=YP_403418.1;transl_table=11
NC_007606.1	RefSeq	gene	1653970	1654260	.	+	.	ID=gene1777;Dbxref=GeneID:3796000;Name=SDY_1817;Note=SDY1817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1817
NC_007606.1	RefSeq	CDS	1653970	1654260	.	+	0	ID=cds1585;Parent=gene1777;Dbxref=Genbank:YP_403419.1,GeneID:3796000;Name=YP_403419.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403419.1;transl_table=11
NC_007606.1	RefSeq	gene	1654366	1655226	.	+	.	ID=gene1778;Dbxref=GeneID:3796001;Name=SDY_1818;Note=SDY1818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1818
NC_007606.1	RefSeq	CDS	1654366	1655226	.	+	0	ID=cds1586;Parent=gene1778;Dbxref=Genbank:YP_403420.1,GeneID:3796001;Name=YP_403420.1;Note=Code: G%3B COG: COG3001;gbkey=CDS;product=hypothetical protein;protein_id=YP_403420.1;transl_table=11
NC_007606.1	RefSeq	gene	1655267	1655803	.	-	.	ID=gene1779;Dbxref=GeneID:3795691;Name=SDY_1819;Note=SDY1819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1819
NC_007606.1	RefSeq	CDS	1655267	1655803	.	-	0	ID=cds1587;Parent=gene1779;Dbxref=Genbank:YP_403421.1,GeneID:3795691;Name=YP_403421.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403421.1;transl_table=11
NC_007606.1	RefSeq	gene	1655950	1656618	.	+	.	ID=gene1780;Dbxref=GeneID:3795692;Name=yniC;Note=SDY1820;gbkey=Gene;gene=yniC;gene_biotype=protein_coding;locus_tag=SDY_1820
NC_007606.1	RefSeq	CDS	1655950	1656618	.	+	0	ID=cds1588;Parent=gene1780;Dbxref=Genbank:YP_403422.1,GeneID:3795692;Name=YP_403422.1;Note=''YniC%3B catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate%2C mannose 6-phosphate and p-nitrophenyl phosphate'';gbkey=CDS;gene=yniC;product=2-deoxyglucose-6-phosphatase;protein_id=YP_403422.1;transl_table=11
NC_007606.1	RefSeq	gene	1656782	1657372	.	+	.	ID=gene1781;Dbxref=GeneID:3795693;Name=SDY_1821;Note=SDY1821;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1821
NC_007606.1	RefSeq	CDS	1656782	1657372	.	+	0	ID=cds1589;Parent=gene1781;Dbxref=Genbank:YP_403423.2,GeneID:3795693;Name=YP_403423.2;Note=Code: R%3B COG: COG1988;gbkey=CDS;product=hypothetical protein;protein_id=YP_403423.2;transl_table=11
NC_007606.1	RefSeq	region	1657420	1658187	.	-	.	ID=id317;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1657435	1657812	.	-	.	ID=gene1782;Dbxref=GeneID:3795694;Name=insB;Note=SDY1822;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1822
NC_007606.1	RefSeq	CDS	1657435	1657812	.	-	0	ID=cds1590;Parent=gene1782;Dbxref=Genbank:YP_403424.1,GeneID:3795694;Name=YP_403424.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403424.1;transl_table=11
NC_007606.1	RefSeq	gene	1657857	1658132	.	-	.	ID=gene1783;Dbxref=GeneID:3795695;Name=insA;Note=SDY1823;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1823
NC_007606.1	RefSeq	CDS	1657857	1658132	.	-	0	ID=cds1591;Parent=gene1783;Dbxref=Genbank:YP_403425.1,GeneID:3795695;Name=YP_403425.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403425.1;transl_table=11
NC_007606.1	RefSeq	gene	1658219	1658935	.	+	.	ID=gene1784;Dbxref=GeneID:3795696;Name=rstA;Note=SDY1824;gbkey=Gene;gene=rstA;gene_biotype=protein_coding;locus_tag=SDY_1824
NC_007606.1	RefSeq	CDS	1658219	1658935	.	+	0	ID=cds1592;Parent=gene1784;Dbxref=Genbank:YP_403426.1,GeneID:3795696;Name=YP_403426.1;Note=response regulator in two-component regulatory system with RstB;gbkey=CDS;gene=rstA;product=DNA-binding transcriptional regulator RstA;protein_id=YP_403426.1;transl_table=11
NC_007606.1	RefSeq	gene	1658939	1660240	.	+	.	ID=gene1785;Dbxref=GeneID:3795697;Name=rstB;Note=SDY1825;gbkey=Gene;gene=rstB;gene_biotype=protein_coding;locus_tag=SDY_1825
NC_007606.1	RefSeq	CDS	1658939	1660240	.	+	0	ID=cds1593;Parent=gene1785;Dbxref=Genbank:YP_403427.1,GeneID:3795697;Name=YP_403427.1;Note=Code: T%3B COG: COG0642;gbkey=CDS;gene=rstB;product=sensor protein RstB;protein_id=YP_403427.1;transl_table=11
NC_007606.1	RefSeq	gene	1660316	1661245	.	+	.	ID=gene1786;Dbxref=GeneID:3795698;Name=tus;Note=SDY1826;gbkey=Gene;gene=tus;gene_biotype=protein_coding;locus_tag=SDY_1826
NC_007606.1	RefSeq	CDS	1660316	1661245	.	+	0	ID=cds1594;Parent=gene1786;Dbxref=Genbank:YP_403428.1,GeneID:3795698;Name=YP_403428.1;Note=binds to DNA replication terminator sequences to prevent passage of replication forks;gbkey=CDS;gene=tus;product=DNA replication terminus site-binding protein;protein_id=YP_403428.1;transl_table=11
NC_007606.1	RefSeq	gene	1661242	1662645	.	-	.	ID=gene1787;Dbxref=GeneID:3795699;Name=fumC;Note=SDY1827;gbkey=Gene;gene=fumC;gene_biotype=protein_coding;locus_tag=SDY_1827
NC_007606.1	RefSeq	CDS	1661242	1662645	.	-	0	ID=cds1595;Parent=gene1787;Dbxref=Genbank:YP_403429.1,GeneID:3795699;Name=YP_403429.1;Note=class II family (does not require metal)%3B tetrameric enzyme%3B fumarase C%3B reversibly converts (S)-malate to fumarate and water%3B functions in the TCA cycle;gbkey=CDS;gene=fumC;product=fumarate hydratase;protein_id=YP_403429.1;transl_table=11
NC_007606.1	RefSeq	gene	1662787	1664433	.	-	.	ID=gene1788;Dbxref=GeneID:3795700;Name=fumA;Note=SDY1828;gbkey=Gene;gene=fumA;gene_biotype=protein_coding;locus_tag=SDY_1828
NC_007606.1	RefSeq	CDS	1662787	1664433	.	-	0	ID=cds1596;Parent=gene1788;Dbxref=Genbank:YP_403430.1,GeneID:3795700;Name=YP_403430.1;Note=Code: C%3B COG: COG1951;gbkey=CDS;gene=fumA;product=fumarase A;protein_id=YP_403430.1;transl_table=11
NC_007606.1	RefSeq	gene	1664632	1665807	.	+	.	ID=gene1789;Dbxref=GeneID:3795701;Name=manA;Note=SDY1829;gbkey=Gene;gene=manA;gene_biotype=protein_coding;locus_tag=SDY_1829
NC_007606.1	RefSeq	CDS	1664632	1665807	.	+	0	ID=cds1597;Parent=gene1789;Dbxref=Genbank:YP_403431.1,GeneID:3795701;Name=YP_403431.1;Note=Code: G%3B COG: COG1482;gbkey=CDS;gene=manA;product=mannose-6-phosphate isomerase;protein_id=YP_403431.1;transl_table=11
NC_007606.1	RefSeq	gene	1665908	1667416	.	+	.	ID=gene1790;Dbxref=GeneID:3795702;Name=ydgA;Note=SDY1830;gbkey=Gene;gene=ydgA;gene_biotype=protein_coding;locus_tag=SDY_1830
NC_007606.1	RefSeq	CDS	1665908	1667416	.	+	0	ID=cds1598;Parent=gene1790;Dbxref=Genbank:YP_403432.1,GeneID:3795702;Name=YP_403432.1;Note=Code: S%3B COG: COG5339;gbkey=CDS;gene=ydgA;product=hypothetical protein;protein_id=YP_403432.1;transl_table=11
NC_007606.1	RefSeq	gene	1667477	1668541	.	-	.	ID=gene1791;Dbxref=GeneID:3795703;Name=uidC;Note=SDY1831%3B contains in-frame stop codon%3B original product: membrane-associated protein;gbkey=Gene;gene=uidC;gene_biotype=pseudogene;locus_tag=SDY_1831;pseudo=true
NC_007606.1	RefSeq	region	1668591	1669356	.	+	.	ID=id318;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1668648	1668920	.	+	.	ID=gene1792;Dbxref=GeneID:18263057;Name=SDY_4673;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4673
NC_007606.1	RefSeq	CDS	1668648	1668920	.	+	0	ID=cds1599;Parent=gene1792;Dbxref=Genbank:YP_009000743.1,GeneID:18263057;Name=YP_009000743.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000743.1;transl_table=11
NC_007606.1	RefSeq	gene	1668947	1669342	.	+	.	ID=gene1793;Dbxref=GeneID:3795704;Name=SDY_1832;Note=SDY1832;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1832
NC_007606.1	RefSeq	CDS	1668947	1669342	.	+	0	ID=cds1600;Parent=gene1793;Dbxref=Genbank:YP_403433.1,GeneID:3795704;Name=YP_403433.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403433.1;transl_table=11
NC_007606.1	RefSeq	region	1669550	1669757	.	+	.	ID=id319;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	1669748	1670108	.	+	.	ID=id320;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1670104	1671480	.	-	.	ID=gene1794;Dbxref=GeneID:3795707;Name=uidB;Note=SDY1835;gbkey=Gene;gene=uidB;gene_biotype=pseudogene;locus_tag=SDY_1835;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1671477	1673288	.	-	.	ID=gene1795;Dbxref=GeneID:3795708;Name=uidA;Note=SDY1836%3B contains in-frame stop codon%3B original product: beta-D-glucuronidase;gbkey=Gene;gene=uidA;gene_biotype=pseudogene;locus_tag=SDY_1836;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1673679	1674269	.	-	.	ID=gene1796;Dbxref=GeneID:3795709;Name=uidR;Note=SDY1837;gbkey=Gene;gene=uidR;gene_biotype=protein_coding;locus_tag=SDY_1837
NC_007606.1	RefSeq	CDS	1673679	1674269	.	-	0	ID=cds1601;Parent=gene1796;Dbxref=Genbank:YP_403437.1,GeneID:3795709;Name=YP_403437.1;Note=Code: K%3B COG: COG1309;gbkey=CDS;gene=uidR;product=DNA-binding transcriptional repressor UidR;protein_id=YP_403437.1;transl_table=11
NC_007606.1	RefSeq	gene	1674498	1675265	.	-	.	ID=gene1797;Dbxref=GeneID:3795710;Name=hdhA;Note=SDY1838;gbkey=Gene;gene=hdhA;gene_biotype=protein_coding;locus_tag=SDY_1838
NC_007606.1	RefSeq	CDS	1674498	1675265	.	-	0	ID=cds1602;Parent=gene1797;Dbxref=Genbank:YP_403438.1,GeneID:3795710;Name=YP_403438.1;Note=Acts on the hydroxyl group at position 7 of the steroid frame;gbkey=CDS;gene=hdhA;product=7-alpha-hydroxysteroid dehydrogenase;protein_id=YP_403438.1;transl_table=11
NC_007606.1	RefSeq	region	1675313	1676724	.	-	.	ID=id321;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1676800	1677828	.	-	.	ID=gene1798;Dbxref=GeneID:3795868;Name=malI;Note=SDY1841;gbkey=Gene;gene=malI;gene_biotype=protein_coding;locus_tag=SDY_1841
NC_007606.1	RefSeq	CDS	1676800	1677828	.	-	0	ID=cds1603;Parent=gene1798;Dbxref=Genbank:YP_403441.1,GeneID:3795868;Name=YP_403441.1;Note=regulates malXY which are involved in maltose-glucose transport;gbkey=CDS;gene=malI;product=DNA-binding transcriptional repressor MalI;protein_id=YP_403441.1;transl_table=11
NC_007606.1	RefSeq	gene	1678003	1679403	.	+	.	ID=gene1799;Dbxref=GeneID:3795869;Name=malX;Note=SDY1842;gbkey=Gene;gene=malX;gene_biotype=protein_coding;locus_tag=SDY_1842
NC_007606.1	RefSeq	CDS	1678003	1679403	.	+	0	ID=cds1604;Parent=gene1799;Dbxref=Genbank:YP_403442.1,GeneID:3795869;Name=YP_403442.1;Note=Code: G%3B COG: COG1263;gbkey=CDS;gene=malX;product=PTS system maltose and glucose-specific transporter subunit IIABC;protein_id=YP_403442.1;transl_table=11
NC_007606.1	RefSeq	region	1679363	1680111	.	-	.	ID=id322;gbkey=mobile_element;gene=malX
NC_007606.1	RefSeq	gene	1679378	1679773	.	-	.	ID=gene1800;Dbxref=GeneID:3795870;Name=SDY_1843;Note=SDY1843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1843
NC_007606.1	RefSeq	CDS	1679378	1679773	.	-	0	ID=cds1605;Parent=gene1800;Dbxref=Genbank:YP_403443.1,GeneID:3795870;Name=YP_403443.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403443.1;transl_table=11
NC_007606.1	RefSeq	gene	1679800	1680054	.	-	.	ID=gene1801;Dbxref=GeneID:18263058;Name=SDY_4674;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4674
NC_007606.1	RefSeq	CDS	1679800	1680054	.	-	0	ID=cds1606;Parent=gene1801;Dbxref=Genbank:YP_009000744.1,GeneID:18263058;Name=YP_009000744.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000744.1;transl_table=11
NC_007606.1	RefSeq	gene	1680362	1681534	.	+	.	ID=gene1802;Dbxref=GeneID:3795872;Name=malY;Note=SDY1845;gbkey=Gene;gene=malY;gene_biotype=protein_coding;locus_tag=SDY_1845
NC_007606.1	RefSeq	CDS	1680362	1681534	.	+	0	ID=cds1607;Parent=gene1802;Dbxref=Genbank:YP_403445.1,GeneID:3795872;Name=YP_403445.1;Note=Code: E%3B COG: COG1168;gbkey=CDS;gene=malY;product=bifunctional beta-cystathionase/maltose operon regulator MalY;protein_id=YP_403445.1;transl_table=11
NC_007606.1	RefSeq	gene	1681638	1682639	.	+	.	ID=gene1803;Dbxref=GeneID:3795873;Name=add;Note=SDY1846;gbkey=Gene;gene=add;gene_biotype=protein_coding;locus_tag=SDY_1846
NC_007606.1	RefSeq	CDS	1681638	1682639	.	+	0	ID=cds1608;Parent=gene1803;Dbxref=Genbank:YP_403446.1,GeneID:3795873;Name=YP_403446.1;Note=catalyzes the formation of inosine from adenosine;gbkey=CDS;gene=add;product=adenosine deaminase;protein_id=YP_403446.1;transl_table=11
NC_007606.1	RefSeq	gene	1682675	1683715	.	-	.	ID=gene1804;Dbxref=GeneID:3795874;Name=SDY_1847;Note=SDY1847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1847
NC_007606.1	RefSeq	CDS	1682675	1683715	.	-	0	ID=cds1609;Parent=gene1804;Dbxref=Genbank:YP_403447.2,GeneID:3795874;Name=YP_403447.2;Note=Code: R%3B COG: COG0673;gbkey=CDS;product=oxidoreductase;protein_id=YP_403447.2;transl_table=11
NC_007606.1	RefSeq	gene	1684362	1684577	.	+	.	ID=gene1805;Dbxref=GeneID:3795875;Name=SDY_1848;Note=SDY1848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1848
NC_007606.1	RefSeq	CDS	1684362	1684577	.	+	0	ID=cds1610;Parent=gene1805;Dbxref=Genbank:YP_403448.1,GeneID:3795875;Name=YP_403448.1;Note=''YdgT%3B in E. coli%2C when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC%3B seems to play a role in optimizing the activity of oriC%3B non-essential%3B Hha protein paralog%3B in an hha mutant background%2C cnu is overexpressed and can compensate hha-induced phenotypes'';gbkey=CDS;product=oriC-binding nucleoid-associated protein;protein_id=YP_403448.1;transl_table=11
NC_007606.1	RefSeq	gene	1684691	1685095	.	+	.	ID=gene1806;Dbxref=GeneID:3795876;Name=SDY_1849;Note=SDY1849;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1849;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1685172	1685753	.	+	.	ID=gene1807;Dbxref=GeneID:3795877;Name=SDY_1850;Note=SDY1850;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1850
NC_007606.1	RefSeq	CDS	1685172	1685753	.	+	0	ID=cds1611;Parent=gene1807;Dbxref=Genbank:YP_403450.1,GeneID:3795877;Name=YP_403450.1;Note=Code: C%3B COG: COG4657;gbkey=CDS;product=Na(+)-translocating NADH-quinone reductase subunit E;protein_id=YP_403450.1;transl_table=11
NC_007606.1	RefSeq	gene	1685753	1686331	.	+	.	ID=gene1808;Dbxref=GeneID:3795878;Name=SDY_1851;Note=SDY1851;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1851
NC_007606.1	RefSeq	CDS	1685753	1686331	.	+	0	ID=cds1612;Parent=gene1808;Dbxref=Genbank:YP_403451.1,GeneID:3795878;Name=YP_403451.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex protein RnfB;protein_id=YP_403451.1;transl_table=11
NC_007606.1	RefSeq	gene	1686324	1688642	.	+	.	ID=gene1809;Dbxref=GeneID:3795879;Name=SDY_1852;Note=SDY1852;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1852
NC_007606.1	RefSeq	CDS	1686324	1688642	.	+	0	ID=cds1613;Parent=gene1809;Dbxref=Genbank:YP_403452.1,GeneID:3795879;Name=YP_403452.1;Note=part of membrane-bound complex thought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex protein RnfC;protein_id=YP_403452.1;transl_table=11
NC_007606.1	RefSeq	gene	1688643	1689701	.	+	.	ID=gene1810;Dbxref=GeneID:3795880;Name=rnfD;Note=SDY1853;gbkey=Gene;gene=rnfD;gene_biotype=protein_coding;locus_tag=SDY_1853
NC_007606.1	RefSeq	CDS	1688643	1689701	.	+	0	ID=cds1614;Parent=gene1810;Dbxref=Genbank:YP_403453.1,GeneID:3795880;Name=YP_403453.1;Note=RnfD%3B RsxD%3B required for nitrogen fixation in Rhodobacter capsulatus%3B part of a membrane-bound complex thought to be involved in electron transport to nitrogenase%3B in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents;gbkey=CDS;gene=rnfD;product=electron transport complex protein RnfD;protein_id=YP_403453.1;transl_table=11
NC_007606.1	RefSeq	gene	1689705	1690325	.	+	.	ID=gene1811;Dbxref=GeneID:3795881;Name=SDY_1854;Note=SDY1854;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1854
NC_007606.1	RefSeq	CDS	1689705	1690325	.	+	0	ID=cds1615;Parent=gene1811;Dbxref=Genbank:YP_403454.1,GeneID:3795881;Name=YP_403454.1;Note=part of membrane-bound complex hought to be involved in electron transport to nitrogen;gbkey=CDS;product=electron transport complex protein RnfG;protein_id=YP_403454.1;transl_table=11
NC_007606.1	RefSeq	gene	1690329	1691024	.	+	.	ID=gene1812;Dbxref=GeneID:3795882;Name=ydgQ;Note=SDY1855;gbkey=Gene;gene=ydgQ;gene_biotype=protein_coding;locus_tag=SDY_1855
NC_007606.1	RefSeq	CDS	1690329	1691024	.	+	0	ID=cds1616;Parent=gene1812;Dbxref=Genbank:YP_403455.1,GeneID:3795882;Name=YP_403455.1;Note=in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents%3B similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase;gbkey=CDS;gene=ydgQ;product=electron transport complex protein RsxE;protein_id=YP_403455.1;transl_table=11
NC_007606.1	RefSeq	gene	1691024	1691659	.	+	.	ID=gene1813;Dbxref=GeneID:3795883;Name=nth;Note=SDY1856;gbkey=Gene;gene=nth;gene_biotype=protein_coding;locus_tag=SDY_1856
NC_007606.1	RefSeq	CDS	1691024	1691659	.	+	0	ID=cds1617;Parent=gene1813;Dbxref=Genbank:YP_403456.1,GeneID:3795883;Name=YP_403456.1;Note=''DNA-(apurinic or apyrimidinic site) lyase%3B has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity%3B removed damaged DNA at cytosines%2C thymines and guanines'';gbkey=CDS;gene=nth;product=endonuclease III;protein_id=YP_403456.1;transl_table=11
NC_007606.1	RefSeq	gene	1692270	1693772	.	+	.	ID=gene1814;Dbxref=GeneID:3795884;Name=tppB;Note=SDY1857;gbkey=Gene;gene=tppB;gene_biotype=protein_coding;gene_synonym=ydgR;locus_tag=SDY_1857
NC_007606.1	RefSeq	CDS	1692270	1693772	.	+	0	ID=cds1618;Parent=gene1814;Dbxref=Genbank:YP_403457.1,GeneID:3795884;Name=YP_403457.1;Note=mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium%3B member of proton-dependent oligopeptide transport (POT) system family%3B in Escherichia coli this gene is regulated by OmpR although not via osmoregulation;gbkey=CDS;gene=tppB;product=tripeptide transporter permease;protein_id=YP_403457.1;transl_table=11
NC_007606.1	RefSeq	gene	1693878	1694483	.	+	.	ID=gene1815;Dbxref=GeneID:3795769;Name=gst;Note=SDY1858;gbkey=Gene;gene=gst;gene_biotype=protein_coding;locus_tag=SDY_1858
NC_007606.1	RefSeq	CDS	1693878	1694483	.	+	0	ID=cds1619;Parent=gene1815;Dbxref=Genbank:YP_403458.1,GeneID:3795769;Name=YP_403458.1;Note=Code: O%3B COG: COG0625;gbkey=CDS;gene=gst;product=glutathionine S-transferase;protein_id=YP_403458.1;transl_table=11
NC_007606.1	RefSeq	gene	1694527	1695390	.	-	.	ID=gene1816;Dbxref=GeneID:3795770;Name=pdxY;Note=SDY1859;gbkey=Gene;gene=pdxY;gene_biotype=protein_coding;locus_tag=SDY_1859
NC_007606.1	RefSeq	CDS	1694527	1695390	.	-	0	ID=cds1620;Parent=gene1816;Dbxref=Genbank:YP_403459.1,GeneID:3795770;Name=YP_403459.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;gene=pdxY;product=pyridoxamine kinase;protein_id=YP_403459.1;transl_table=11
NC_007606.1	RefSeq	gene	1695449	1696723	.	-	.	ID=gene1817;Dbxref=GeneID:3795771;Name=tyrS;Note=SDY1860;gbkey=Gene;gene=tyrS;gene_biotype=protein_coding;locus_tag=SDY_1860
NC_007606.1	RefSeq	CDS	1695449	1696723	.	-	0	ID=cds1621;Parent=gene1817;Dbxref=Genbank:YP_403460.1,GeneID:3795771;Name=YP_403460.1;Note=catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr);gbkey=CDS;gene=tyrS;product=tyrosyl-tRNA synthetase;protein_id=YP_403460.1;transl_table=11
NC_007606.1	RefSeq	gene	1696852	1697508	.	-	.	ID=gene1818;Dbxref=GeneID:3795772;Name=pdxH;Note=SDY1861;gbkey=Gene;gene=pdxH;gene_biotype=protein_coding;locus_tag=SDY_1861
NC_007606.1	RefSeq	CDS	1696852	1697508	.	-	0	ID=cds1622;Parent=gene1818;Dbxref=Genbank:YP_403461.1,GeneID:3795772;Name=YP_403461.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate;gbkey=CDS;gene=pdxH;product=pyridoxamine 5'-phosphate oxidase;protein_id=YP_403461.1;transl_table=11
NC_007606.1	RefSeq	gene	1697567	1697896	.	-	.	ID=gene1819;Dbxref=GeneID:3795773;Name=ydhA;Note=SDY1862;gbkey=Gene;gene=ydhA;gene_biotype=protein_coding;locus_tag=SDY_1862
NC_007606.1	RefSeq	CDS	1697567	1697896	.	-	0	ID=cds1623;Parent=gene1819;Dbxref=Genbank:YP_403462.2,GeneID:3795773;Name=YP_403462.2;Note=Code: R%3B COG: COG3895;gbkey=CDS;gene=ydhA;product=hypothetical protein;protein_id=YP_403462.2;transl_table=11
NC_007606.1	RefSeq	gene	1697994	1699103	.	-	.	ID=gene1820;Dbxref=GeneID:3795774;Name=anmK;Note=SDY1863;gbkey=Gene;gene=anmK;gene_biotype=protein_coding;gene_synonym=ydhH;locus_tag=SDY_1863
NC_007606.1	RefSeq	CDS	1697994	1699103	.	-	0	ID=cds1624;Parent=gene1820;Dbxref=Genbank:YP_403463.1,GeneID:3795774;Name=YP_403463.1;Note=''catalyzes hydrolysis of 1%2C6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate%3B involved in murein recycling'';gbkey=CDS;gene=anmK;product=anhydro-N-acetylmuramic acid kinase;protein_id=YP_403463.1;transl_table=11
NC_007606.1	RefSeq	gene	1699377	1699844	.	+	.	ID=gene1821;Dbxref=GeneID:3795775;Name=slyB;Note=SDY1864;gbkey=Gene;gene=slyB;gene_biotype=protein_coding;locus_tag=SDY_1864
NC_007606.1	RefSeq	CDS	1699377	1699844	.	+	0	ID=cds1625;Parent=gene1821;Dbxref=Genbank:YP_403464.1,GeneID:3795775;Name=YP_403464.1;Note=Code: M%3B COG: COG3133;gbkey=CDS;gene=slyB;product=outer membrane protein;protein_id=YP_403464.1;transl_table=11
NC_007606.1	RefSeq	gene	1699891	1700325	.	-	.	ID=gene1822;Dbxref=GeneID:3795776;Name=slyA;Note=SDY1865;gbkey=Gene;gene=slyA;gene_biotype=protein_coding;locus_tag=SDY_1865
NC_007606.1	RefSeq	CDS	1699891	1700325	.	-	0	ID=cds1626;Parent=gene1822;Dbxref=Genbank:YP_403465.2,GeneID:3795776;Name=YP_403465.2;Note=Transcription regulator that can both activate or repress expression;gbkey=CDS;gene=slyA;product=transcriptional regulator SlyA;protein_id=YP_403465.2;transl_table=11
NC_007606.1	RefSeq	gene	1700526	1700762	.	+	.	ID=gene1823;Dbxref=GeneID:3795777;Name=SDY_1866;Note=SDY1866;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1866
NC_007606.1	RefSeq	CDS	1700526	1700762	.	+	0	ID=cds1627;Parent=gene1823;Dbxref=Genbank:YP_403466.1,GeneID:3795777;Name=YP_403466.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403466.1;transl_table=11
NC_007606.1	RefSeq	gene	1700723	1701622	.	+	.	ID=gene1824;Dbxref=GeneID:3795778;Name=SDY_1867;Note=SDY1867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1867
NC_007606.1	RefSeq	CDS	1700723	1701622	.	+	0	ID=cds1628;Parent=gene1824;Dbxref=Genbank:YP_403467.1,GeneID:3795778;Name=YP_403467.1;Note=Code: V%3B COG: COG1566;gbkey=CDS;product=hypothetical protein;protein_id=YP_403467.1;transl_table=11
NC_007606.1	RefSeq	gene	1701622	1703648	.	+	.	ID=gene1825;Dbxref=GeneID:3795779;Name=SDY_1868;Note=SDY1868;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1868;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1703649	1704170	.	-	.	ID=gene1826;Dbxref=GeneID:3795781;Name=sodC;Note=SDY1870;gbkey=Gene;gene=sodC;gene_biotype=protein_coding;locus_tag=SDY_1870
NC_007606.1	RefSeq	CDS	1703649	1704170	.	-	0	ID=cds1629;Parent=gene1826;Dbxref=Genbank:YP_403470.1,GeneID:3795781;Name=YP_403470.1;Note=SodC%3B copper and zinc binding%3B converts superoxide radicals to hydrogen peroxide and water;gbkey=CDS;gene=sodC;product=superoxide dismutase;protein_id=YP_403470.1;transl_table=11
NC_007606.1	RefSeq	gene	1704251	1705147	.	-	.	ID=gene1827;Dbxref=GeneID:3795782;Name=SDY_1871;Note=SDY1871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1871
NC_007606.1	RefSeq	CDS	1704251	1705147	.	-	0	ID=cds1630;Parent=gene1827;Dbxref=Genbank:YP_403471.1,GeneID:3795782;Name=YP_403471.1;Note=Code: R%3B COG: COG4989;gbkey=CDS;product=hypothetical protein;protein_id=YP_403471.1;transl_table=11
NC_007606.1	RefSeq	gene	1705196	1705573	.	-	.	ID=gene1828;Dbxref=GeneID:3795784;Name=SDY_1873;Note=SDY1873;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1873
NC_007606.1	RefSeq	CDS	1705196	1705573	.	-	0	ID=cds1631;Parent=gene1828;Dbxref=Genbank:YP_403472.1,GeneID:3795784;Name=YP_403472.1;Note=Code: R%3B COG: COG3313;gbkey=CDS;product=hypothetical protein;protein_id=YP_403472.1;transl_table=11
NC_007606.1	RefSeq	gene	1705538	1706137	.	+	.	ID=gene1829;Dbxref=GeneID:3795783;Name=SDY_1872;Note=SDY1872;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1872
NC_007606.1	RefSeq	CDS	1705538	1706137	.	+	0	ID=cds1632;Parent=gene1829;Dbxref=Genbank:YP_403473.1,GeneID:3795783;Name=YP_403473.1;Note=Code: K%3B COG: COG1309;gbkey=CDS;product=hypothetical protein;protein_id=YP_403473.1;transl_table=11
NC_007606.1	RefSeq	region	1706238	1707003	.	-	.	ID=id323;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1706252	1706647	.	-	.	ID=gene1830;Dbxref=GeneID:3795785;Name=SDY_1874;Note=SDY1874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1874
NC_007606.1	RefSeq	CDS	1706252	1706647	.	-	0	ID=cds1633;Parent=gene1830;Dbxref=Genbank:YP_403474.1,GeneID:3795785;Name=YP_403474.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403474.1;transl_table=11
NC_007606.1	RefSeq	gene	1706674	1706946	.	-	.	ID=gene1831;Dbxref=GeneID:18263059;Name=SDY_4675;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4675
NC_007606.1	RefSeq	CDS	1706674	1706946	.	-	0	ID=cds1634;Parent=gene1831;Dbxref=Genbank:YP_009000745.1,GeneID:18263059;Name=YP_009000745.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000745.1;transl_table=11
NC_007606.1	RefSeq	gene	1708126	1708533	.	+	.	ID=gene1832;Dbxref=GeneID:3795788;Name=gloA;Note=SDY1877;gbkey=Gene;gene=gloA;gene_biotype=protein_coding;locus_tag=SDY_1877
NC_007606.1	RefSeq	CDS	1708126	1708533	.	+	0	ID=cds1635;Parent=gene1832;Dbxref=Genbank:YP_403477.1,GeneID:3795788;Name=YP_403477.1;Note=Ni-dependent%3B catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione;gbkey=CDS;gene=gloA;product=glyoxalase I;protein_id=YP_403477.1;transl_table=11
NC_007606.1	RefSeq	gene	1708636	1709283	.	+	.	ID=gene1833;Dbxref=GeneID:3798217;Name=rnt;Note=SDY1878;gbkey=Gene;gene=rnt;gene_biotype=protein_coding;locus_tag=SDY_1878
NC_007606.1	RefSeq	CDS	1708636	1709283	.	+	0	ID=cds1636;Parent=gene1833;Dbxref=Genbank:YP_403478.1,GeneID:3798217;Name=YP_403478.1;Note=Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A);gbkey=CDS;gene=rnt;product=ribonuclease T;protein_id=YP_403478.1;transl_table=11
NC_007606.1	RefSeq	gene	1709376	1713992	.	+	.	ID=gene1834;Dbxref=GeneID:3798218;Name=lhr;Note=SDY1879%3B contains in-frame stop codon%3B original product: member of ATP-dependent helicase superfamily II;gbkey=Gene;gene=lhr;gene_biotype=pseudogene;locus_tag=SDY_1879;pseudo=true
NC_007606.1	RefSeq	gene	1714043	1714390	.	-	.	ID=gene1835;Dbxref=GeneID:3798219;Name=ydhD;Note=SDY1880;gbkey=Gene;gene=ydhD;gene_biotype=protein_coding;locus_tag=SDY_1880
NC_007606.1	RefSeq	CDS	1714043	1714390	.	-	0	ID=cds1637;Parent=gene1835;Dbxref=Genbank:YP_403479.1,GeneID:3798219;Name=YP_403479.1;Note=Code: O%3B COG: COG0278;gbkey=CDS;gene=ydhD;product=hypothetical protein;protein_id=YP_403479.1;transl_table=11
NC_007606.1	RefSeq	gene	1714725	1715552	.	+	.	ID=gene1836;Dbxref=GeneID:3798220;Name=ydhO;Note=SDY1881;gbkey=Gene;gene=ydhO;gene_biotype=protein_coding;locus_tag=SDY_1881
NC_007606.1	RefSeq	CDS	1714725	1715552	.	+	0	ID=cds1638;Parent=gene1836;Dbxref=Genbank:YP_403480.1,GeneID:3798220;Name=YP_403480.1;Note=Code: M%3B COG: COG0791;gbkey=CDS;gene=ydhO;product=lipoprotein;protein_id=YP_403480.1;transl_table=11
NC_007606.1	RefSeq	gene	1715680	1716261	.	+	.	ID=gene1837;Dbxref=GeneID:3798221;Name=sodB;Note=SDY1882;gbkey=Gene;gene=sodB;gene_biotype=protein_coding;locus_tag=SDY_1882
NC_007606.1	RefSeq	CDS	1715680	1716261	.	+	0	ID=cds1639;Parent=gene1837;Dbxref=Genbank:YP_403481.1,GeneID:3798221;Name=YP_403481.1;Note=SodB%3B iron binding%3B present under aerobic and anaerobic conditions%3B destroys free radicals;gbkey=CDS;gene=sodB;product=superoxide dismutase;protein_id=YP_403481.1;transl_table=11
NC_007606.1	RefSeq	gene	1716407	1717576	.	-	.	ID=gene1838;Dbxref=GeneID:3798222;Name=SDY_1883;Note=SDY1883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1883
NC_007606.1	RefSeq	CDS	1716407	1717576	.	-	0	ID=cds1640;Parent=gene1838;Dbxref=Genbank:YP_403482.1,GeneID:3798222;Name=YP_403482.1;Note=Code: G%3B COG: COG2814;gbkey=CDS;product=transport protein;protein_id=YP_403482.1;transl_table=11
NC_007606.1	RefSeq	gene	1718130	1719155	.	+	.	ID=gene1839;Dbxref=GeneID:3798223;Name=purR;Note=SDY1884;gbkey=Gene;gene=purR;gene_biotype=protein_coding;locus_tag=SDY_1884
NC_007606.1	RefSeq	CDS	1718130	1719155	.	+	0	ID=cds1641;Parent=gene1839;Dbxref=Genbank:YP_403483.1,GeneID:3798223;Name=YP_403483.1;Note=''binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis%3B is involved in regulation of purB%2C purC%2C purEK%2C purHD%2C purL%2C purMN and guaBA expression%3B binds hypoxanthine and guanine as inducers'';gbkey=CDS;gene=purR;product=DNA-binding transcriptional repressor PurR;protein_id=YP_403483.1;transl_table=11
NC_007606.1	RefSeq	gene	1719152	1720084	.	-	.	ID=gene1840;Dbxref=GeneID:3798224;Name=ydhB;Note=SDY1885;gbkey=Gene;gene=ydhB;gene_biotype=protein_coding;locus_tag=SDY_1885
NC_007606.1	RefSeq	CDS	1719152	1720084	.	-	0	ID=cds1642;Parent=gene1840;Dbxref=Genbank:YP_403484.1,GeneID:3798224;Name=YP_403484.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=ydhB;product=DNA-binding transcriptional regulator;protein_id=YP_403484.1;transl_table=11
NC_007606.1	RefSeq	gene	1720197	1721408	.	+	.	ID=gene1841;Dbxref=GeneID:3798225;Name=ydhC;Note=SDY1886;gbkey=Gene;gene=ydhC;gene_biotype=protein_coding;locus_tag=SDY_1886
NC_007606.1	RefSeq	CDS	1720197	1721408	.	+	0	ID=cds1643;Parent=gene1841;Dbxref=Genbank:YP_403485.1,GeneID:3798225;Name=YP_403485.1;Note=uncharacterized member of the major facilitator superfamily (MFS);gbkey=CDS;gene=ydhC;product=inner membrane transport protein YdhC;protein_id=YP_403485.1;transl_table=11
NC_007606.1	RefSeq	gene	1721699	1722847	.	+	.	ID=gene1842;Dbxref=GeneID:3798226;Name=cfa;Note=SDY1887;gbkey=Gene;gene=cfa;gene_biotype=protein_coding;locus_tag=SDY_1887
NC_007606.1	RefSeq	CDS	1721699	1722847	.	+	0	ID=cds1644;Parent=gene1842;Dbxref=Genbank:YP_403486.1,GeneID:3798226;Name=YP_403486.1;Note=catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge;gbkey=CDS;gene=cfa;product=cyclopropane-fatty-acyl-phospholipid synthase;protein_id=YP_403486.1;transl_table=11
NC_007606.1	RefSeq	gene	1722887	1723528	.	-	.	ID=gene1843;Dbxref=GeneID:3798227;Name=ribE;Note=SDY1888;gbkey=Gene;gene=ribE;gene_biotype=protein_coding;locus_tag=SDY_1888
NC_007606.1	RefSeq	CDS	1722887	1723528	.	-	0	ID=cds1645;Parent=gene1843;Dbxref=Genbank:YP_403487.1,GeneID:3798227;Name=YP_403487.1;Note=''catalyzes the formation of riboflavin from 6%2C7-dimethyl-8-(1-D-ribityl)lumazine'';gbkey=CDS;gene=ribE;product=riboflavin synthase subunit alpha;protein_id=YP_403487.1;transl_table=11
NC_007606.1	RefSeq	region	1723622	1724388	.	+	.	ID=id324;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1723679	1723951	.	+	.	ID=gene1844;Dbxref=GeneID:18263060;Name=SDY_4676;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4676
NC_007606.1	RefSeq	CDS	1723679	1723951	.	+	0	ID=cds1646;Parent=gene1844;Dbxref=Genbank:YP_009000746.1,GeneID:18263060;Name=YP_009000746.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000746.1;transl_table=11
NC_007606.1	RefSeq	gene	1723978	1724373	.	+	.	ID=gene1845;Dbxref=GeneID:3798228;Name=SDY_1889;Note=SDY1889;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1889
NC_007606.1	RefSeq	CDS	1723978	1724373	.	+	0	ID=cds1647;Parent=gene1845;Dbxref=Genbank:YP_403488.1,GeneID:3798228;Name=YP_403488.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403488.1;transl_table=11
NC_007606.1	RefSeq	gene	1724517	1725890	.	+	.	ID=gene1846;Dbxref=GeneID:3798229;Name=ydhE;Note=SDY1890;gbkey=Gene;gene=ydhE;gene_biotype=protein_coding;locus_tag=SDY_1890
NC_007606.1	RefSeq	CDS	1724517	1725890	.	+	0	ID=cds1648;Parent=gene1846;Dbxref=Genbank:YP_403489.1,GeneID:3798229;Name=YP_403489.1;Note=NorM%3B MdtK%3B functions as a Na(+)/drug antiporter%3B inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones;gbkey=CDS;gene=ydhE;product=multidrug efflux protein;protein_id=YP_403489.1;transl_table=11
NC_007606.1	RefSeq	gene	1725931	1727187	.	-	.	ID=gene1847;Dbxref=GeneID:3798230;Name=SDY_1891;Note=SDY1891;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1891
NC_007606.1	RefSeq	CDS	1725931	1727187	.	-	0	ID=cds1649;Parent=gene1847;Dbxref=Genbank:YP_403490.1,GeneID:3798230;Name=YP_403490.1;Note=Code: MU%3B COG: COG3468;gbkey=CDS;product=hypothetical protein;protein_id=YP_403490.1;transl_table=11
NC_007606.1	RefSeq	gene	1727495	1727571	.	+	.	ID=gene1848;Dbxref=GeneID:3798231;Name=SDY_1892;Note=SDY1892;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1892
NC_007606.1	RefSeq	tRNA	1727495	1727571	.	+	.	ID=rna33;Parent=gene1848;Dbxref=GeneID:3798231;codons=49;gbkey=tRNA;product=tRNA-Val
NC_007606.1	RefSeq	exon	1727495	1727571	.	+	.	ID=id325;Parent=rna33;Dbxref=GeneID:3798231;codons=49;gbkey=tRNA;product=tRNA-Val
NC_007606.1	RefSeq	gene	1727576	1727652	.	+	.	ID=gene1849;Dbxref=GeneID:3798232;Name=SDY_1893;Note=SDY1893;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1893
NC_007606.1	RefSeq	tRNA	1727576	1727652	.	+	.	ID=rna34;Parent=gene1849;Dbxref=GeneID:3798232;codons=49;gbkey=tRNA;product=tRNA-Val
NC_007606.1	RefSeq	exon	1727576	1727652	.	+	.	ID=id326;Parent=rna34;Dbxref=GeneID:3798232;codons=49;gbkey=tRNA;product=tRNA-Val
NC_007606.1	RefSeq	region	1727908	1729171	.	-	.	ID=id327;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1727951	1728664	.	-	.	ID=gene1850;Dbxref=GeneID:3798233;Name=SDY_1894;Note=SDY1894;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1894;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1728805	1729107	.	-	.	ID=gene1851;Dbxref=GeneID:3798311;Name=SDY_1895;Note=SDY1895;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1895
NC_007606.1	RefSeq	CDS	1728805	1729107	.	-	0	ID=cds1650;Parent=gene1851;Dbxref=Genbank:YP_403492.1,GeneID:3798311;Name=YP_403492.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403492.1;transl_table=11
NC_007606.1	RefSeq	gene	1729250	1730717	.	+	.	ID=gene1852;Dbxref=GeneID:3798312;Name=SDY_1896;Note=SDY1896;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1896;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1730729	1731541	.	-	.	ID=gene1853;Dbxref=GeneID:3798313;Name=SDY_1897;Note=SDY1897;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1897
NC_007606.1	RefSeq	CDS	1730729	1731541	.	-	0	ID=cds1651;Parent=gene1853;Dbxref=Genbank:YP_403494.1,GeneID:3798313;Name=YP_403494.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403494.1;transl_table=11
NC_007606.1	RefSeq	gene	1731545	1732330	.	-	.	ID=gene1854;Dbxref=GeneID:3798314;Name=ydhU;Note=SDY1898;gbkey=Gene;gene=ydhU;gene_biotype=protein_coding;locus_tag=SDY_1898
NC_007606.1	RefSeq	CDS	1731545	1732330	.	-	0	ID=cds1652;Parent=gene1854;Dbxref=Genbank:YP_403495.1,GeneID:3798314;Name=YP_403495.1;Note=Code: C%3B COG: COG4117;gbkey=CDS;gene=ydhU;product=hypothetical protein;protein_id=YP_403495.1;transl_table=11
NC_007606.1	RefSeq	gene	1732327	1733046	.	-	.	ID=gene1855;Dbxref=GeneID:3798315;Name=SDY_1899;Note=SDY1899;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1899
NC_007606.1	RefSeq	CDS	1732327	1733046	.	-	0	ID=cds1653;Parent=gene1855;Dbxref=Genbank:YP_403496.1,GeneID:3798315;Name=YP_403496.1;Note=Code: C%3B COG: COG0437;gbkey=CDS;product=oxidoreductase Fe-S subunit;protein_id=YP_403496.1;transl_table=11
NC_007606.1	RefSeq	gene	1733059	1733706	.	-	.	ID=gene1856;Dbxref=GeneID:3798316;Name=SDY_1900;Note=SDY1900;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1900
NC_007606.1	RefSeq	CDS	1733059	1733706	.	-	0	ID=cds1654;Parent=gene1856;Dbxref=Genbank:YP_403497.1,GeneID:3798316;Name=YP_403497.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403497.1;transl_table=11
NC_007606.1	RefSeq	region	1733811	1734311	.	+	.	ID=id328;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1733875	1734177	.	+	.	ID=gene1857;Dbxref=GeneID:3798317;Name=SDY_1901;Note=SDY1901;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1901
NC_007606.1	RefSeq	CDS	1733875	1734177	.	+	0	ID=cds1655;Parent=gene1857;Dbxref=Genbank:YP_403498.1,GeneID:3798317;Name=YP_403498.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403498.1;transl_table=11
NC_007606.1	RefSeq	region	1734312	1735059	.	+	.	ID=id329;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1735129	1735338	.	-	.	ID=gene1858;Dbxref=GeneID:3798320;Name=SDY_1904;Note=SDY1904;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1904
NC_007606.1	RefSeq	CDS	1735129	1735338	.	-	0	ID=cds1656;Parent=gene1858;Dbxref=Genbank:YP_403501.1,GeneID:3798320;Name=YP_403501.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403501.1;transl_table=11
NC_007606.1	RefSeq	gene	1735895	1737307	.	+	.	ID=gene1859;Dbxref=GeneID:3798321;Name=pykF;Note=SDY1905;gbkey=Gene;gene=pykF;gene_biotype=protein_coding;locus_tag=SDY_1905
NC_007606.1	RefSeq	CDS	1735895	1737307	.	+	0	ID=cds1657;Parent=gene1859;Dbxref=Genbank:YP_403502.1,GeneID:3798321;Name=YP_403502.1;Note=catalyzes the formation of phosphoenolpyruvate from pyruvate;gbkey=CDS;gene=pykF;product=pyruvate kinase;protein_id=YP_403502.1;transl_table=11
NC_007606.1	RefSeq	region	1737440	1738206	.	+	.	ID=id330;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1737495	1737770	.	+	.	ID=gene1860;Dbxref=GeneID:3798322;Name=insA;Note=SDY1906;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1906
NC_007606.1	RefSeq	CDS	1737495	1737770	.	+	0	ID=cds1658;Parent=gene1860;Dbxref=Genbank:YP_403503.1,GeneID:3798322;Name=YP_403503.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403503.1;transl_table=11
NC_007606.1	RefSeq	gene	1737815	1738191	.	+	.	ID=gene1861;Dbxref=GeneID:3798323;Name=insB;Note=SDY1907;gbkey=Gene;gene=insB;gene_biotype=pseudogene;locus_tag=SDY_1907;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1738394	1738630	.	+	.	ID=gene1862;Dbxref=GeneID:3798324;Name=lpp;Note=SDY1908;gbkey=Gene;gene=lpp;gene_biotype=protein_coding;locus_tag=SDY_1908
NC_007606.1	RefSeq	CDS	1738394	1738630	.	+	0	ID=cds1659;Parent=gene1862;Dbxref=Genbank:YP_403505.1,GeneID:3798324;Name=YP_403505.1;Note=Code: M%3B COG: COG4238;gbkey=CDS;gene=lpp;product=murein lipoprotein;protein_id=YP_403505.1;transl_table=11
NC_007606.1	RefSeq	gene	1738693	1739697	.	-	.	ID=gene1863;Dbxref=GeneID:3798325;Name=ynhG;Note=SDY1909;gbkey=Gene;gene=ynhG;gene_biotype=protein_coding;locus_tag=SDY_1909
NC_007606.1	RefSeq	CDS	1738693	1739697	.	-	0	ID=cds1660;Parent=gene1863;Dbxref=Genbank:YP_403506.1,GeneID:3798325;Name=YP_403506.1;Note=Code: S%3B COG: COG1376;gbkey=CDS;gene=ynhG;product=hypothetical protein;protein_id=YP_403506.1;transl_table=11
NC_007606.1	RefSeq	gene	1739846	1740262	.	-	.	ID=gene1864;Dbxref=GeneID:3798326;Name=ynhA;Note=SDY1910;gbkey=Gene;gene=ynhA;gene_biotype=protein_coding;locus_tag=SDY_1910
NC_007606.1	RefSeq	CDS	1739846	1740262	.	-	0	ID=cds1661;Parent=gene1864;Dbxref=Genbank:YP_403507.1,GeneID:3798326;Name=YP_403507.1;Note=Acts with SufS to catalyze the formation of L-alanine from L-cysteine;gbkey=CDS;gene=ynhA;product=cysteine desufuration protein SufE;protein_id=YP_403507.1;transl_table=11
NC_007606.1	RefSeq	gene	1740275	1741495	.	-	.	ID=gene1865;Dbxref=GeneID:3798327;Name=SDY_1911;Note=SDY1911;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1911;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1741492	1742763	.	-	.	ID=gene1866;Dbxref=GeneID:3798328;Name=ynhC;Note=SDY1912;gbkey=Gene;gene=ynhC;gene_biotype=protein_coding;locus_tag=SDY_1912;pseudogene=unknown
NC_007606.1	RefSeq	CDS	1741492	1742763	.	-	0	ID=cds1662;Parent=gene1866;Dbxref=Genbank:YP_403509.1,GeneID:3798328;Name=YP_403509.1;Note=with SufBC activates cysteine desulfurase SufS;gbkey=CDS;gene=ynhC;product=cysteine desulfurase;protein_id=YP_403509.1;transl_table=11
NC_007606.1	RefSeq	gene	1742738	1743484	.	-	.	ID=gene1867;Dbxref=GeneID:3798329;Name=sufC;Note=SDY1913;gbkey=Gene;gene=sufC;gene_biotype=protein_coding;locus_tag=SDY_1913
NC_007606.1	RefSeq	CDS	1742738	1743484	.	-	0	ID=cds1663;Parent=gene1867;Dbxref=Genbank:YP_403510.1,GeneID:3798329;Name=YP_403510.1;Note=part of SUF system involved in inserting iron-sulfur clusters into proteins%3B in Escherichia coli this protein forms a complex with SufBD%3B the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE;gbkey=CDS;gene=sufC;product=cysteine desulfurase;protein_id=YP_403510.1;transl_table=11
NC_007606.1	RefSeq	gene	1743494	1744518	.	-	.	ID=gene1868;Dbxref=GeneID:3798330;Name=ynhE;Note=SDY1914;gbkey=Gene;gene=ynhE;gene_biotype=pseudogene;locus_tag=SDY_1914;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1744550	1745287	.	-	.	ID=gene1869;Dbxref=GeneID:3796443;Name=SDY_1915;Note=SDY1915;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1915
NC_007606.1	RefSeq	CDS	1744550	1745287	.	-	0	ID=cds1664;Parent=gene1869;Dbxref=Genbank:YP_403512.1,GeneID:3796443;Name=YP_403512.1;gbkey=CDS;product=phage Mu Mom-like protein;protein_id=YP_403512.1;transl_table=11
NC_007606.1	RefSeq	gene	1745479	1746072	.	-	.	ID=gene1870;Dbxref=GeneID:3796444;Name=SDY_1916;Note=SDY1916;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1916
NC_007606.1	RefSeq	CDS	1745479	1746072	.	-	0	ID=cds1665;Parent=gene1870;Dbxref=Genbank:YP_403513.1,GeneID:3796444;Name=YP_403513.1;Note=Code: L%3B COG: COG1961;gbkey=CDS;product=DNA-invertase;protein_id=YP_403513.1;transl_table=11
NC_007606.1	RefSeq	gene	1746264	1746758	.	+	.	ID=gene1871;Dbxref=GeneID:3796445;Name=SDY_1917;Note=SDY1917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1917
NC_007606.1	RefSeq	CDS	1746264	1746758	.	+	0	ID=cds1666;Parent=gene1871;Dbxref=Genbank:YP_403514.1,GeneID:3796445;Name=YP_403514.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403514.1;transl_table=11
NC_007606.1	RefSeq	region	1746740	1748006	.	-	.	ID=id331;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1746783	1747631	.	-	.	ID=gene1872;Dbxref=GeneID:3796446;Name=SDY_1918;Note=SDY1918;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1918
NC_007606.1	RefSeq	CDS	1746783	1747631	.	-	0	ID=cds1667;Parent=gene1872;Dbxref=Genbank:YP_403515.1,GeneID:3796446;Name=YP_403515.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_403515.1;transl_table=11
NC_007606.1	RefSeq	region	1749487	1749594	.	+	.	ID=id332;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	1749606	1750371	.	-	.	ID=id333;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1749620	1750015	.	-	.	ID=gene1873;Dbxref=GeneID:3796447;Name=SDY_1919;Note=SDY1919;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1919
NC_007606.1	RefSeq	CDS	1749620	1750015	.	-	0	ID=cds1668;Parent=gene1873;Dbxref=Genbank:YP_403516.1,GeneID:3796447;Name=YP_403516.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403516.1;transl_table=11
NC_007606.1	RefSeq	gene	1750042	1750314	.	-	.	ID=gene1874;Dbxref=GeneID:18263061;Name=SDY_4677;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4677
NC_007606.1	RefSeq	CDS	1750042	1750314	.	-	0	ID=cds1669;Parent=gene1874;Dbxref=Genbank:YP_009000747.1,GeneID:18263061;Name=YP_009000747.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000747.1;transl_table=11
NC_007606.1	RefSeq	region	1750372	1751627	.	+	.	ID=id334;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1750428	1750730	.	+	.	ID=gene1875;Dbxref=GeneID:3796448;Name=SDY_1920;Note=SDY1920;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1920
NC_007606.1	RefSeq	CDS	1750428	1750730	.	+	0	ID=cds1670;Parent=gene1875;Dbxref=Genbank:YP_403517.1,GeneID:3796448;Name=YP_403517.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403517.1;transl_table=11
NC_007606.1	RefSeq	gene	1750871	1751685	.	+	.	ID=gene1876;Dbxref=GeneID:3796449;Name=SDY_1921;Note=SDY1921;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1921;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1751625	1752287	.	-	.	ID=gene1877;Dbxref=GeneID:3796450;Name=SDY_1922;Note=SDY1922;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1922
NC_007606.1	RefSeq	CDS	1751625	1752287	.	-	0	ID=cds1671;Parent=gene1877;Dbxref=Genbank:YP_403519.1,GeneID:3796450;Name=YP_403519.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403519.1;transl_table=11
NC_007606.1	RefSeq	gene	1752281	1752652	.	-	.	ID=gene1878;Dbxref=GeneID:3796451;Name=SDY_1923;Note=SDY1923;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1923
NC_007606.1	RefSeq	CDS	1752281	1752652	.	-	0	ID=cds1672;Parent=gene1878;Dbxref=Genbank:YP_403520.1,GeneID:3796451;Name=YP_403520.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403520.1;transl_table=11
NC_007606.1	RefSeq	gene	1753199	1753402	.	-	.	ID=gene1879;Dbxref=GeneID:3796452;Name=SDY_1924;Note=SDY1924;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1924
NC_007606.1	RefSeq	CDS	1753199	1753402	.	-	0	ID=cds1673;Parent=gene1879;Dbxref=Genbank:YP_403521.1,GeneID:3796452;Name=YP_403521.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403521.1;transl_table=11
NC_007606.1	RefSeq	gene	1753498	1754211	.	+	.	ID=gene1880;Dbxref=GeneID:3796453;Name=SDY_1925;Note=SDY1925;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1925
NC_007606.1	RefSeq	CDS	1753498	1754211	.	+	0	ID=cds1674;Parent=gene1880;Dbxref=Genbank:YP_403522.1,GeneID:3796453;Name=YP_403522.1;Note=Code: KT%3B COG: COG1974;gbkey=CDS;product=repressor protein CI;protein_id=YP_403522.1;transl_table=11
NC_007606.1	RefSeq	gene	1754305	1755774	.	+	.	ID=gene1881;Dbxref=GeneID:3796454;Name=SDY_1926;Note=SDY1926;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1926
NC_007606.1	RefSeq	CDS	1754305	1755774	.	+	0	ID=cds1675;Parent=gene1881;Dbxref=Genbank:YP_403523.1,GeneID:3796454;Name=YP_403523.1;gbkey=CDS;product=site-specific DNA-methyltransferase;protein_id=YP_403523.1;transl_table=11
NC_007606.1	RefSeq	gene	1755771	1756724	.	+	.	ID=gene1882;Dbxref=GeneID:3796455;Name=SDY_1927;Note=SDY1927;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1927
NC_007606.1	RefSeq	CDS	1755771	1756724	.	+	0	ID=cds1676;Parent=gene1882;Dbxref=REBASE:SdySORF1926P,Genbank:YP_403524.1,GeneID:3796455;Name=YP_403524.1;gbkey=CDS;product=type II site-specific deoxyribonuclease;protein_id=YP_403524.1;transl_table=11
NC_007606.1	RefSeq	gene	1757618	1758034	.	+	.	ID=gene1883;Dbxref=GeneID:3796456;Name=SDY_1928;Note=SDY1928;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1928
NC_007606.1	RefSeq	CDS	1757618	1758034	.	+	0	ID=cds1677;Parent=gene1883;Dbxref=Genbank:YP_403525.1,GeneID:3796456;Name=YP_403525.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403525.1;transl_table=11
NC_007606.1	RefSeq	gene	1758031	1758264	.	+	.	ID=gene1884;Dbxref=GeneID:3796457;Name=SDY_1929;Note=SDY1929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1929
NC_007606.1	RefSeq	CDS	1758031	1758264	.	+	0	ID=cds1678;Parent=gene1884;Dbxref=Genbank:YP_403526.1,GeneID:3796457;Name=YP_403526.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403526.1;transl_table=11
NC_007606.1	RefSeq	region	1758409	1759658	.	-	.	ID=id335;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1759284	1759586	.	-	.	ID=gene1885;Dbxref=GeneID:3796460;Name=SDY_1932;Note=SDY1932;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1932
NC_007606.1	RefSeq	CDS	1759284	1759586	.	-	0	ID=cds1679;Parent=gene1885;Dbxref=Genbank:YP_403529.1,GeneID:3796460;Name=YP_403529.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_403529.1;transl_table=11
NC_007606.1	RefSeq	gene	1759633	1759800	.	+	.	ID=gene1886;Dbxref=GeneID:3796461;Name=SDY_1933;Note=SDY1933;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1933
NC_007606.1	RefSeq	CDS	1759633	1759800	.	+	0	ID=cds1680;Parent=gene1886;Dbxref=Genbank:YP_403530.1,GeneID:3796461;Name=YP_403530.1;gbkey=CDS;product=prophage Kil protein;protein_id=YP_403530.1;transl_table=11
NC_007606.1	RefSeq	region	1759801	1760568	.	+	.	ID=id336;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1759856	1760131	.	+	.	ID=gene1887;Dbxref=GeneID:3798689;Name=insA;Note=SDY1934;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1934
NC_007606.1	RefSeq	CDS	1759856	1760131	.	+	0	ID=cds1681;Parent=gene1887;Dbxref=Genbank:YP_403531.1,GeneID:3798689;Name=YP_403531.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403531.1;transl_table=11
NC_007606.1	RefSeq	gene	1760176	1760553	.	+	.	ID=gene1888;Dbxref=GeneID:18263062;Name=SDY_1934a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1934a
NC_007606.1	RefSeq	CDS	1760176	1760553	.	+	0	ID=cds1682;Parent=gene1888;Dbxref=Genbank:YP_009000748.1,GeneID:18263062;Name=YP_009000748.1;gbkey=CDS;product=insertion sequence element IS1 transposase;protein_id=YP_009000748.1;transl_table=11
NC_007606.1	RefSeq	gene	1760488	1761662	.	-	.	ID=gene1889;Dbxref=GeneID:3798690;Name=ycjM;Note=SDY1935%3B frameshift%3B original product:  polysaccharide hydrolase;gbkey=Gene;gene=ycjM;gene_biotype=pseudogene;locus_tag=SDY_1935;pseudo=true
NC_007606.1	RefSeq	gene	1761846	1762160	.	-	.	ID=gene1890;Dbxref=GeneID:3798691;Name=pspE;Note=SDY1936;gbkey=Gene;gene=pspE;gene_biotype=protein_coding;locus_tag=SDY_1936
NC_007606.1	RefSeq	CDS	1761846	1762160	.	-	0	ID=cds1683;Parent=gene1890;Dbxref=Genbank:YP_403532.1,GeneID:3798691;Name=YP_403532.1;Note=rhodanese%3B catalyzes the formation of thiocyanate from thiosulfate and hydrogen cyanide;gbkey=CDS;gene=pspE;product=thiosulfate:cyanide sulfurtransferase;protein_id=YP_403532.1;transl_table=11
NC_007606.1	RefSeq	gene	1762235	1762456	.	-	.	ID=gene1891;Dbxref=GeneID:3798692;Name=pspD;Note=SDY1937;gbkey=Gene;gene=pspD;gene_biotype=protein_coding;locus_tag=SDY_1937
NC_007606.1	RefSeq	CDS	1762235	1762456	.	-	0	ID=cds1684;Parent=gene1891;Dbxref=Genbank:YP_403533.1,GeneID:3798692;Name=YP_403533.1;gbkey=CDS;gene=pspD;product=peripheral inner membrane phage-shock protein;protein_id=YP_403533.1;transl_table=11
NC_007606.1	RefSeq	gene	1762465	1762824	.	-	.	ID=gene1892;Dbxref=GeneID:3798693;Name=pspC;Note=SDY1938;gbkey=Gene;gene=pspC;gene_biotype=protein_coding;locus_tag=SDY_1938
NC_007606.1	RefSeq	CDS	1762465	1762824	.	-	0	ID=cds1685;Parent=gene1892;Dbxref=Genbank:YP_403534.1,GeneID:3798693;Name=YP_403534.1;Note=''with PsbB forms toxin/antitoxin pair%3B activates the psp operon in response to phage infection%2C exposure to ethanol or osmotic shock'';gbkey=CDS;gene=pspC;product=DNA-binding transcriptional activator PspC;protein_id=YP_403534.1;transl_table=11
NC_007606.1	RefSeq	gene	1762824	1763048	.	-	.	ID=gene1893;Dbxref=GeneID:3798694;Name=pspB;Note=SDY1939;gbkey=Gene;gene=pspB;gene_biotype=protein_coding;locus_tag=SDY_1939
NC_007606.1	RefSeq	CDS	1762824	1763048	.	-	0	ID=cds1686;Parent=gene1893;Dbxref=Genbank:YP_403535.1,GeneID:3798694;Name=YP_403535.1;Note=''acts together with PspC to induce psp operon during infection with phage%2C exposure to ethanol or osmotic shock%3B forms a complex with PspA and C%3B PspC is required for PspAB binding'';gbkey=CDS;gene=pspB;product=phage shock protein B;protein_id=YP_403535.1;transl_table=11
NC_007606.1	RefSeq	gene	1763102	1763770	.	-	.	ID=gene1894;Dbxref=GeneID:3798695;Name=pspA;Note=SDY1940;gbkey=Gene;gene=pspA;gene_biotype=protein_coding;locus_tag=SDY_1940
NC_007606.1	RefSeq	CDS	1763102	1763770	.	-	0	ID=cds1687;Parent=gene1894;Dbxref=Genbank:YP_403536.1,GeneID:3798695;Name=YP_403536.1;Note=involved in maintaining membrane potential under membrane stress conditions%3B also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF;gbkey=CDS;gene=pspA;product=phage shock protein PspA;protein_id=YP_403536.1;transl_table=11
NC_007606.1	RefSeq	gene	1763937	1764914	.	+	.	ID=gene1895;Dbxref=GeneID:3798696;Name=pspF;Note=SDY1941;gbkey=Gene;gene=pspF;gene_biotype=protein_coding;locus_tag=SDY_1941
NC_007606.1	RefSeq	CDS	1763937	1764914	.	+	0	ID=cds1688;Parent=gene1895;Dbxref=Genbank:YP_403537.2,GeneID:3798696;Name=YP_403537.2;Note=''transcriptional activator for pspABCE which are induced in response to phage proteins%2C membrane altering stresses%2C and impaired proton expor'';gbkey=CDS;gene=pspF;product=phage shock protein operon transcriptional activator;protein_id=YP_403537.2;transl_table=11
NC_007606.1	RefSeq	gene	1765045	1766309	.	-	.	ID=gene1896;Dbxref=GeneID:3798697;Name=goaG;Note=SDY1942%3B frameshift%3B original product: 4-aminobutyrate aminotransferase;gbkey=Gene;gene=goaG;gene_biotype=pseudogene;locus_tag=SDY_1942;pseudo=true
NC_007606.1	RefSeq	gene	1766347	1767627	.	-	.	ID=gene1897;Dbxref=GeneID:3798698;Name=ordL;Note=SDY1943;gbkey=Gene;gene=ordL;gene_biotype=protein_coding;locus_tag=SDY_1943
NC_007606.1	RefSeq	CDS	1766347	1767627	.	-	0	ID=cds1689;Parent=gene1897;Dbxref=Genbank:YP_403538.1,GeneID:3798698;Name=YP_403538.1;Note=Code: E%3B COG: COG0665;gbkey=CDS;gene=ordL;product=oxidoreductase;protein_id=YP_403538.1;transl_table=11
NC_007606.1	RefSeq	gene	1767629	1769116	.	-	.	ID=gene1898;Dbxref=GeneID:3798699;Name=aldH;Note=''SDY1944%3B contains in-frame stop codon%3B original product: aldehyde dehydrogenase%2C prefers NADP over NAD'';gbkey=Gene;gene=aldH;gene_biotype=pseudogene;locus_tag=SDY_1944;pseudo=true
NC_007606.1	RefSeq	gene	1769266	1769823	.	-	.	ID=gene1899;Dbxref=GeneID:3798700;Name=ycjC;Note=SDY1945;gbkey=Gene;gene=ycjC;gene_biotype=protein_coding;locus_tag=SDY_1945
NC_007606.1	RefSeq	CDS	1769266	1769823	.	-	0	ID=cds1690;Parent=gene1899;Dbxref=Genbank:YP_403539.1,GeneID:3798700;Name=YP_403539.1;Note=regulates genes involved in putrescine degradation;gbkey=CDS;gene=ycjC;product=DNA-binding transcriptional repressor PuuR;protein_id=YP_403539.1;transl_table=11
NC_007606.1	RefSeq	gene	1769850	1770621	.	-	.	ID=gene1900;Dbxref=GeneID:3798701;Name=ycjL;Note=SDY1946%3B frameshift%3B original product: probable amidotransferase subunit;gbkey=Gene;gene=ycjL;gene_biotype=pseudogene;locus_tag=SDY_1946;pseudo=true
NC_007606.1	RefSeq	gene	1770827	1772244	.	+	.	ID=gene1901;Dbxref=GeneID:3798702;Name=SDY_1947;Note=SDY1947;gbkey=Gene;gene_biotype=other;locus_tag=SDY_1947
NC_007606.1	RefSeq	gene	1772493	1773359	.	+	.	ID=gene1902;Dbxref=GeneID:3798703;Name=ycjJ;Note=SDY1948%3B truncated%3B original product:  amino acid/amine transport protein;gbkey=Gene;gene=ycjJ;gene_biotype=pseudogene;locus_tag=SDY_1948;pseudo=true
NC_007606.1	RefSeq	region	1773355	1774120	.	-	.	ID=id337;gbkey=mobile_element;gene=ycjJ
NC_007606.1	RefSeq	gene	1773369	1773764	.	-	.	ID=gene1903;Dbxref=GeneID:3798704;Name=SDY_1949;Note=SDY1949;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1949
NC_007606.1	RefSeq	CDS	1773369	1773764	.	-	0	ID=cds1691;Parent=gene1903;Dbxref=Genbank:YP_403541.1,GeneID:3798704;Name=YP_403541.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403541.1;transl_table=11
NC_007606.1	RefSeq	gene	1773791	1774063	.	-	.	ID=gene1904;Dbxref=GeneID:18263063;Name=SDY_4678;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4678
NC_007606.1	RefSeq	CDS	1773791	1774063	.	-	0	ID=cds1692;Parent=gene1904;Dbxref=Genbank:YP_009000749.1,GeneID:18263063;Name=YP_009000749.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000749.1;transl_table=11
NC_007606.1	RefSeq	gene	1774286	1774498	.	-	.	ID=gene1905;Dbxref=GeneID:3798705;Name=SDY_1950;Note=SDY1950;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1950
NC_007606.1	RefSeq	CDS	1774286	1774498	.	-	0	ID=cds1693;Parent=gene1905;Dbxref=Genbank:YP_403542.1,GeneID:3798705;Name=YP_403542.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403542.1;transl_table=11
NC_007606.1	RefSeq	gene	1774574	1775182	.	-	.	ID=gene1906;Dbxref=GeneID:3798706;Name=SDY_1951;Note=SDY1951;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1951
NC_007606.1	RefSeq	CDS	1774574	1775182	.	-	0	ID=cds1694;Parent=gene1906;Dbxref=Genbank:YP_403543.1,GeneID:3798706;Name=YP_403543.1;Note=Code: O%3B COG: COG0625;gbkey=CDS;product=transferase;protein_id=YP_403543.1;transl_table=11
NC_007606.1	RefSeq	gene	1775398	1776948	.	+	.	ID=gene1907;Dbxref=GeneID:3798707;Name=ansP;Note=SDY1952;gbkey=Gene;gene=ansP;gene_biotype=protein_coding;locus_tag=SDY_1952
NC_007606.1	RefSeq	CDS	1775398	1776948	.	+	0	ID=cds1695;Parent=gene1907;Dbxref=Genbank:YP_403544.1,GeneID:3798707;Name=YP_403544.1;Note=Code: E%3B COG: COG1113;gbkey=CDS;gene=ansP;product=L-asparagine permease;protein_id=YP_403544.1;transl_table=11
NC_007606.1	RefSeq	gene	1777061	1778122	.	-	.	ID=gene1908;Dbxref=GeneID:3798708;Name=SDY_1953;Note=SDY1953;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1953
NC_007606.1	RefSeq	CDS	1777061	1778122	.	-	0	ID=cds1696;Parent=gene1908;Dbxref=Genbank:YP_403545.1,GeneID:3798708;Name=YP_403545.1;Note=Code: S%3B COG: COG3391;gbkey=CDS;product=receptor;protein_id=YP_403545.1;transl_table=11
NC_007606.1	RefSeq	gene	1778364	1780067	.	+	.	ID=gene1909;Dbxref=GeneID:3798080;Name=SDY_1954;Note=SDY1954;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1954
NC_007606.1	RefSeq	CDS	1778364	1780067	.	+	0	ID=cds1697;Parent=gene1909;Dbxref=Genbank:YP_403546.2,GeneID:3798080;Name=YP_403546.2;Note=Code: P%3B COG: COG1629;gbkey=CDS;product=outer membrane receptor for iron transport;protein_id=YP_403546.2;transl_table=11
NC_007606.1	RefSeq	region	1780303	1781069	.	+	.	ID=id338;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1780361	1780633	.	+	.	ID=gene1910;Dbxref=GeneID:18263064;Name=SDY_4679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4679
NC_007606.1	RefSeq	CDS	1780361	1780633	.	+	0	ID=cds1698;Parent=gene1910;Dbxref=Genbank:YP_009000750.1,GeneID:18263064;Name=YP_009000750.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000750.1;transl_table=11
NC_007606.1	RefSeq	gene	1780660	1781055	.	+	.	ID=gene1911;Dbxref=GeneID:3798082;Name=SDY_1956;Note=SDY1956;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1956
NC_007606.1	RefSeq	CDS	1780660	1781055	.	+	0	ID=cds1699;Parent=gene1911;Dbxref=Genbank:YP_403548.1,GeneID:3798082;Name=YP_403548.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403548.1;transl_table=11
NC_007606.1	RefSeq	gene	1781276	1781713	.	-	.	ID=gene1912;Dbxref=GeneID:3798083;Name=SDY_1957;Note=SDY1957;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1957
NC_007606.1	RefSeq	CDS	1781276	1781713	.	-	0	ID=cds1700;Parent=gene1912;Dbxref=Genbank:YP_403549.1,GeneID:3798083;Name=YP_403549.1;Note=Code: K%3B COG: COG1802;gbkey=CDS;product=hypothetical protein;protein_id=YP_403549.1;transl_table=11
NC_007606.1	RefSeq	region	1781720	1782486	.	+	.	ID=id339;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1781775	1782050	.	+	.	ID=gene1913;Dbxref=GeneID:3798084;Name=insA;Note=SDY1958;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_1958
NC_007606.1	RefSeq	CDS	1781775	1782050	.	+	0	ID=cds1701;Parent=gene1913;Dbxref=Genbank:YP_403550.1,GeneID:3798084;Name=YP_403550.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403550.1;transl_table=11
NC_007606.1	RefSeq	gene	1782095	1782472	.	+	.	ID=gene1914;Dbxref=GeneID:3798085;Name=insB;Note=SDY1959;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_1959
NC_007606.1	RefSeq	CDS	1782095	1782472	.	+	0	ID=cds1702;Parent=gene1914;Dbxref=Genbank:YP_403551.1,GeneID:3798085;Name=YP_403551.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403551.1;transl_table=11
NC_007606.1	RefSeq	gene	1782422	1783910	.	+	.	ID=gene1915;Dbxref=GeneID:3798086;Name=SDY_1960;Note=SDY1960;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_1960;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1783914	1785464	.	-	.	ID=gene1916;Dbxref=GeneID:3798088;Name=yoaE;Note=SDY1962;gbkey=Gene;gene=yoaE;gene_biotype=protein_coding;locus_tag=SDY_1962
NC_007606.1	RefSeq	CDS	1783914	1785464	.	-	0	ID=cds1703;Parent=gene1916;Dbxref=Genbank:YP_403554.1,GeneID:3798088;Name=YP_403554.1;Note=Code: R%3B COG: COG1253;gbkey=CDS;gene=yoaE;product=transport protein;protein_id=YP_403554.1;transl_table=11
NC_007606.1	RefSeq	gene	1785928	1786899	.	+	.	ID=gene1917;Dbxref=GeneID:3798089;Name=manX;Note=SDY1963;gbkey=Gene;gene=manX;gene_biotype=protein_coding;locus_tag=SDY_1963
NC_007606.1	RefSeq	CDS	1785928	1786899	.	+	0	ID=cds1704;Parent=gene1917;Dbxref=Genbank:YP_403555.1,GeneID:3798089;Name=YP_403555.1;Note=Code: G%3B COG: COG2893;gbkey=CDS;gene=manX;product=PTS system mannose-specific transporter subunit IIAB;protein_id=YP_403555.1;transl_table=11
NC_007606.1	RefSeq	gene	1786962	1787763	.	+	.	ID=gene1918;Dbxref=GeneID:3798090;Name=manY;Note=''SDY1964%3B frameshift%3B original product: PTS enzyme IIC%2C mannose-specific'';gbkey=Gene;gene=manY;gene_biotype=pseudogene;locus_tag=SDY_1964;pseudo=true
NC_007606.1	RefSeq	gene	1787767	1788627	.	+	.	ID=gene1919;Dbxref=GeneID:3798091;Name=manZ;Note=SDY1965;gbkey=Gene;gene=manZ;gene_biotype=protein_coding;locus_tag=SDY_1965
NC_007606.1	RefSeq	CDS	1787767	1788627	.	+	0	ID=cds1705;Parent=gene1919;Dbxref=Genbank:YP_403556.1,GeneID:3798091;Name=YP_403556.1;Note=hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IID with IIC forms the translocation channel;gbkey=CDS;gene=manZ;product=PTS system mannose-specific transporter subunit IID;protein_id=YP_403556.1;transl_table=11
NC_007606.1	RefSeq	gene	1788682	1789140	.	+	.	ID=gene1920;Dbxref=GeneID:3798092;Name=SDY_1966;Note=SDY1966;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1966
NC_007606.1	RefSeq	CDS	1788682	1789140	.	+	0	ID=cds1706;Parent=gene1920;Dbxref=Genbank:YP_403557.1,GeneID:3798092;Name=YP_403557.1;Note=Code: S%3B COG: COG4811;gbkey=CDS;product=hypothetical protein;protein_id=YP_403557.1;transl_table=11
NC_007606.1	RefSeq	gene	1789515	1790135	.	+	.	ID=gene1921;Dbxref=GeneID:3798093;Name=SDY_1967;Note=SDY1967;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1967
NC_007606.1	RefSeq	CDS	1789515	1790135	.	+	0	ID=cds1707;Parent=gene1921;Dbxref=Genbank:YP_403558.1,GeneID:3798093;Name=YP_403558.1;Note=membrane protein YebN;gbkey=CDS;product=hypothetical protein;protein_id=YP_403558.1;transl_table=11
NC_007606.1	RefSeq	gene	1790132	1790941	.	-	.	ID=gene1922;Dbxref=GeneID:3798094;Name=rrmA;Note=SDY1968;gbkey=Gene;gene=rrmA;gene_biotype=protein_coding;locus_tag=SDY_1968
NC_007606.1	RefSeq	CDS	1790132	1790941	.	-	0	ID=cds1708;Parent=gene1922;Dbxref=Genbank:YP_403559.1,GeneID:3798094;Name=YP_403559.1;Note=methylates the guanosine in position 745 of 23S rRNA%3B required for translation and cell growth;gbkey=CDS;gene=rrmA;product=23S rRNA methyltransferase;protein_id=YP_403559.1;transl_table=11
NC_007606.1	RefSeq	gene	1791107	1791316	.	-	.	ID=gene1923;Dbxref=GeneID:3798095;Name=cspC;Note=SDY1969;gbkey=Gene;gene=cspC;gene_biotype=protein_coding;locus_tag=SDY_1969
NC_007606.1	RefSeq	CDS	1791107	1791316	.	-	0	ID=cds1709;Parent=gene1923;Dbxref=Genbank:YP_403560.1,GeneID:3798095;Name=YP_403560.1;Note=Code: K%3B COG: COG1278;gbkey=CDS;gene=cspC;product=cold shock-like protein CspC;protein_id=YP_403560.1;transl_table=11
NC_007606.1	RefSeq	gene	1791329	1791472	.	-	.	ID=gene1924;Dbxref=GeneID:3798096;Name=SDY_1970;Note=SDY1970;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1970
NC_007606.1	RefSeq	CDS	1791329	1791472	.	-	0	ID=cds1710;Parent=gene1924;Dbxref=Genbank:YP_403561.1,GeneID:3798096;Name=YP_403561.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403561.1;transl_table=11
NC_007606.1	RefSeq	region	1791987	1792760	.	+	.	ID=id340;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1792051	1792323	.	+	.	ID=gene1925;Dbxref=GeneID:18263065;Name=SDY_4680;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4680
NC_007606.1	RefSeq	CDS	1792051	1792323	.	+	0	ID=cds1711;Parent=gene1925;Dbxref=Genbank:YP_009000751.1,GeneID:18263065;Name=YP_009000751.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000751.1;transl_table=11
NC_007606.1	RefSeq	gene	1792350	1792745	.	+	.	ID=gene1926;Dbxref=GeneID:3798097;Name=SDY_1971;Note=SDY1971;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1971
NC_007606.1	RefSeq	CDS	1792350	1792745	.	+	0	ID=cds1712;Parent=gene1926;Dbxref=Genbank:YP_403562.1,GeneID:3798097;Name=YP_403562.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403562.1;transl_table=11
NC_007606.1	RefSeq	gene	1792762	1793049	.	-	.	ID=gene1927;Dbxref=GeneID:3798098;Name=SDY_1972;Note=SDY1972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1972
NC_007606.1	RefSeq	CDS	1792762	1793049	.	-	0	ID=cds1713;Parent=gene1927;Dbxref=Genbank:YP_403563.1,GeneID:3798098;Name=YP_403563.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403563.1;transl_table=11
NC_007606.1	RefSeq	gene	1793124	1793267	.	-	.	ID=gene1928;Dbxref=GeneID:3798822;Name=SDY_1973;Note=SDY1973;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1973
NC_007606.1	RefSeq	CDS	1793124	1793267	.	-	0	ID=cds1714;Parent=gene1928;Dbxref=Genbank:YP_403564.1,GeneID:3798822;Name=YP_403564.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403564.1;transl_table=11
NC_007606.1	RefSeq	gene	1793426	1793665	.	+	.	ID=gene1929;Dbxref=GeneID:3798823;Name=SDY_1974;Note=SDY1974;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1974
NC_007606.1	RefSeq	CDS	1793426	1793665	.	+	0	ID=cds1715;Parent=gene1929;Dbxref=Genbank:YP_403565.1,GeneID:3798823;Name=YP_403565.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403565.1;transl_table=11
NC_007606.1	RefSeq	gene	1793809	1794600	.	-	.	ID=gene1930;Dbxref=GeneID:3798824;Name=SDY_1975;Note=SDY1975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1975
NC_007606.1	RefSeq	CDS	1793809	1794600	.	-	0	ID=cds1716;Parent=gene1930;Dbxref=Genbank:YP_403566.1,GeneID:3798824;Name=YP_403566.1;Note=Code: K%3B COG: COG1414;gbkey=CDS;product=regulator;protein_id=YP_403566.1;transl_table=11
NC_007606.1	RefSeq	gene	1794666	1796048	.	+	.	ID=gene1931;Dbxref=GeneID:3798825;Name=SDY_1976;Note=SDY1976;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1976
NC_007606.1	RefSeq	CDS	1794666	1796048	.	+	0	ID=cds1717;Parent=gene1931;Dbxref=Genbank:YP_403567.1,GeneID:3798825;Name=YP_403567.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;product=transport protein;protein_id=YP_403567.1;transl_table=11
NC_007606.1	RefSeq	gene	1796191	1797072	.	-	.	ID=gene1932;Dbxref=GeneID:3798826;Name=htpX;Note=SDY1977;gbkey=Gene;gene=htpX;gene_biotype=protein_coding;locus_tag=SDY_1977
NC_007606.1	RefSeq	CDS	1796191	1797072	.	-	0	ID=cds1718;Parent=gene1932;Dbxref=Genbank:YP_403568.1,GeneID:3798826;Name=YP_403568.1;Note=metalloprotease;gbkey=CDS;gene=htpX;product=heat shock protein HtpX;protein_id=YP_403568.1;transl_table=11
NC_007606.1	RefSeq	gene	1797264	1799312	.	-	.	ID=gene1933;Dbxref=GeneID:3798827;Name=prc;Note=SDY1978;gbkey=Gene;gene=prc;gene_biotype=protein_coding;locus_tag=SDY_1978
NC_007606.1	RefSeq	CDS	1797264	1799312	.	-	0	ID=cds1719;Parent=gene1933;Dbxref=Genbank:YP_403569.1,GeneID:3798827;Name=YP_403569.1;Note=Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3;gbkey=CDS;gene=prc;product=carboxy-terminal protease;protein_id=YP_403569.1;transl_table=11
NC_007606.1	RefSeq	gene	1799332	1800030	.	-	.	ID=gene1934;Dbxref=GeneID:3798828;Name=proQ;Note=SDY1979;gbkey=Gene;gene=proQ;gene_biotype=protein_coding;locus_tag=SDY_1979
NC_007606.1	RefSeq	CDS	1799332	1800030	.	-	0	ID=cds1720;Parent=gene1934;Dbxref=Genbank:YP_403570.1,GeneID:3798828;Name=YP_403570.1;Note=affects solute and DNA transport through an unknown mechanism;gbkey=CDS;gene=proQ;product=solute/DNA competence effector;protein_id=YP_403570.1;transl_table=11
NC_007606.1	RefSeq	gene	1800127	1800678	.	-	.	ID=gene1935;Dbxref=GeneID:3798829;Name=SDY_1980;Note=SDY1980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1980
NC_007606.1	RefSeq	CDS	1800127	1800678	.	-	0	ID=cds1721;Parent=gene1935;Dbxref=Genbank:YP_403571.1,GeneID:3798829;Name=YP_403571.1;Note=Code: T%3B COG: COG1956;gbkey=CDS;product=hypothetical protein;protein_id=YP_403571.1;transl_table=11
NC_007606.1	RefSeq	gene	1800754	1801074	.	+	.	ID=gene1936;Dbxref=GeneID:3798830;Name=SDY_1981;Note=SDY1981;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1981
NC_007606.1	RefSeq	CDS	1800754	1801074	.	+	0	ID=cds1722;Parent=gene1936;Dbxref=Genbank:YP_403572.1,GeneID:3798830;Name=YP_403572.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403572.1;transl_table=11
NC_007606.1	RefSeq	gene	1801111	1801611	.	+	.	ID=gene1937;Dbxref=GeneID:3798831;Name=SDY_1982;Note=SDY1982;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1982
NC_007606.1	RefSeq	CDS	1801111	1801611	.	+	0	ID=cds1723;Parent=gene1937;Dbxref=Genbank:YP_403573.1,GeneID:3798831;Name=YP_403573.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403573.1;transl_table=11
NC_007606.1	RefSeq	region	1801594	1802359	.	+	.	ID=id341;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1801651	1801923	.	+	.	ID=gene1938;Dbxref=GeneID:18263066;Name=SDY_4681;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4681
NC_007606.1	RefSeq	CDS	1801651	1801923	.	+	0	ID=cds1724;Parent=gene1938;Dbxref=Genbank:YP_009000752.1,GeneID:18263066;Name=YP_009000752.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000752.1;transl_table=11
NC_007606.1	RefSeq	gene	1801950	1802345	.	+	.	ID=gene1939;Dbxref=GeneID:3798832;Name=SDY_1983;Note=SDY1983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1983
NC_007606.1	RefSeq	CDS	1801950	1802345	.	+	0	ID=cds1725;Parent=gene1939;Dbxref=Genbank:YP_403574.1,GeneID:3798832;Name=YP_403574.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403574.1;transl_table=11
NC_007606.1	RefSeq	gene	1802375	1802812	.	+	.	ID=gene1940;Dbxref=GeneID:3798833;Name=SDY_1984;Note=SDY1984;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1984
NC_007606.1	RefSeq	CDS	1802375	1802812	.	+	0	ID=cds1726;Parent=gene1940;Dbxref=Genbank:YP_403575.1,GeneID:3798833;Name=YP_403575.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403575.1;transl_table=11
NC_007606.1	RefSeq	gene	1802775	1805402	.	+	.	ID=gene1941;Dbxref=GeneID:3798834;Name=SDY_1985;Note=SDY1985;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1985
NC_007606.1	RefSeq	CDS	1802775	1805402	.	+	0	ID=cds1727;Parent=gene1941;Dbxref=Genbank:YP_403576.1,GeneID:3798834;Name=YP_403576.1;Note=Code: R%3B COG: COG3008;gbkey=CDS;product=hypothetical protein;protein_id=YP_403576.1;transl_table=11
NC_007606.1	RefSeq	gene	1805476	1806921	.	+	.	ID=gene1942;Dbxref=GeneID:3798835;Name=yebU;Note=SDY1986;gbkey=Gene;gene=yebU;gene_biotype=protein_coding;locus_tag=SDY_1986
NC_007606.1	RefSeq	CDS	1805476	1806921	.	+	0	ID=cds1728;Parent=gene1942;Dbxref=Genbank:YP_403577.1,GeneID:3798835;Name=YP_403577.1;Note=in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA;gbkey=CDS;gene=yebU;product=rRNA (cytosine-C(5)-)-methyltransferase RsmF;protein_id=YP_403577.1;transl_table=11
NC_007606.1	RefSeq	gene	1807024	1807275	.	+	.	ID=gene1943;Dbxref=GeneID:3798836;Name=SDY_1987;Note=SDY1987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1987
NC_007606.1	RefSeq	CDS	1807024	1807275	.	+	0	ID=cds1729;Parent=gene1943;Dbxref=Genbank:YP_403578.1,GeneID:3798836;Name=YP_403578.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403578.1;transl_table=11
NC_007606.1	RefSeq	gene	1807380	1807571	.	+	.	ID=gene1944;Dbxref=GeneID:3798837;Name=SDY_1988;Note=SDY1988;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1988
NC_007606.1	RefSeq	CDS	1807380	1807571	.	+	0	ID=cds1730;Parent=gene1944;Dbxref=Genbank:YP_403579.2,GeneID:3798837;Name=YP_403579.2;gbkey=CDS;product=hypothetical protein;protein_id=YP_403579.2;transl_table=11
NC_007606.1	RefSeq	gene	1807572	1807937	.	-	.	ID=gene1945;Dbxref=GeneID:3798838;Name=pphA;Note=''SDY1989%3B truncated%3B original product: protein phosphatase 1 modulates phosphoproteins%2C signals protein misfolding'';gbkey=Gene;gene=pphA;gene_biotype=pseudogene;locus_tag=SDY_1989;pseudo=true
NC_007606.1	RefSeq	region	1807951	1808678	.	-	.	ID=id342;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	1808679	1809927	.	+	.	ID=id343;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1808751	1809053	.	+	.	ID=gene1946;Dbxref=GeneID:3798840;Name=SDY_1991;Note=SDY1991;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1991
NC_007606.1	RefSeq	CDS	1808751	1809053	.	+	0	ID=cds1731;Parent=gene1946;Dbxref=Genbank:YP_403581.1,GeneID:3798840;Name=YP_403581.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_403581.1;transl_table=11
NC_007606.1	RefSeq	gene	1809080	1809919	.	+	.	ID=gene1947;Dbxref=GeneID:3798841;Name=SDY_1992;Note=SDY1992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1992
NC_007606.1	RefSeq	CDS	1809080	1809919	.	+	0	ID=cds1732;Parent=gene1947;Dbxref=Genbank:YP_403582.1,GeneID:3798841;Name=YP_403582.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS911 integrase core domain-containing protein;protein_id=YP_403582.1;transl_table=11
NC_007606.1	RefSeq	gene	1809934	1810203	.	-	.	ID=gene1948;Dbxref=GeneID:3797538;Name=SDY_1993;Note=SDY1993;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1993
NC_007606.1	RefSeq	CDS	1809934	1810203	.	-	0	ID=cds1733;Parent=gene1948;Dbxref=Genbank:YP_403583.1,GeneID:3797538;Name=YP_403583.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403583.1;transl_table=11
NC_007606.1	RefSeq	gene	1810224	1810300	.	+	.	ID=gene1949;Dbxref=GeneID:3797539;Name=SDY_1994;Note=SDY1994;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1994
NC_007606.1	RefSeq	tRNA	1810224	1810300	.	+	.	ID=rna35;Parent=gene1949;Dbxref=GeneID:3797539;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	exon	1810224	1810300	.	+	.	ID=id344;Parent=rna35;Dbxref=GeneID:3797539;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	gene	1810302	1810378	.	+	.	ID=gene1950;Dbxref=GeneID:3797540;Name=SDY_1995;Note=SDY1995;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1995
NC_007606.1	RefSeq	tRNA	1810302	1810378	.	+	.	ID=rna36;Parent=gene1950;Dbxref=GeneID:3797540;codons=46;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	exon	1810302	1810378	.	+	.	ID=id345;Parent=rna36;Dbxref=GeneID:3797540;codons=46;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	gene	1810381	1810456	.	+	.	ID=gene1951;Dbxref=GeneID:3797541;Name=SDY_1996;Note=SDY1996;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1996
NC_007606.1	RefSeq	tRNA	1810381	1810456	.	+	.	ID=rna37;Parent=gene1951;Dbxref=GeneID:3797541;codons=38;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	exon	1810381	1810456	.	+	.	ID=id346;Parent=rna37;Dbxref=GeneID:3797541;codons=38;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	gene	1810460	1810534	.	+	.	ID=gene1952;Dbxref=GeneID:3797542;Name=SDY_1997;Note=SDY1997;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_1997
NC_007606.1	RefSeq	tRNA	1810460	1810534	.	+	.	ID=rna38;Parent=gene1952;Dbxref=GeneID:3797542;codons=62;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	exon	1810460	1810534	.	+	.	ID=id347;Parent=rna38;Dbxref=GeneID:3797542;codons=62;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	gene	1810827	1811042	.	+	.	ID=gene1953;Dbxref=GeneID:3797543;Name=ybcR;Note=SDY1998;gbkey=Gene;gene=ybcR;gene_biotype=protein_coding;locus_tag=SDY_1998
NC_007606.1	RefSeq	CDS	1810827	1811042	.	+	0	ID=cds1734;Parent=gene1953;Dbxref=Genbank:YP_403584.1,GeneID:3797543;Name=YP_403584.1;gbkey=CDS;gene=ybcR;product=hypothetical protein;protein_id=YP_403584.1;transl_table=11
NC_007606.1	RefSeq	region	1811163	1812428	.	+	.	ID=id348;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1811227	1811529	.	+	.	ID=gene1954;Dbxref=GeneID:3797544;Name=SDY_1999;Note=SDY1999;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_1999
NC_007606.1	RefSeq	CDS	1811227	1811529	.	+	0	ID=cds1735;Parent=gene1954;Dbxref=Genbank:YP_403585.1,GeneID:3797544;Name=YP_403585.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403585.1;transl_table=11
NC_007606.1	RefSeq	gene	1811565	1812450	.	+	.	ID=gene1955;Dbxref=GeneID:3797545;Name=SDY_2000;Note=SDY2000;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2000;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1812689	1814404	.	-	.	ID=gene1956;Dbxref=GeneID:3797546;Name=ipaH_4;Note=SDY2001;gbkey=Gene;gene=ipaH_4;gene_biotype=protein_coding;locus_tag=SDY_2001
NC_007606.1	RefSeq	CDS	1812689	1814404	.	-	0	ID=cds1736;Parent=gene1956;Dbxref=Genbank:YP_403587.1,GeneID:3797546;Name=YP_403587.1;Note=Code: S%3B COG: COG4886;gbkey=CDS;gene=ipaH_4;product=invasion plasmid antigen;protein_id=YP_403587.1;transl_table=11
NC_007606.1	RefSeq	region	1814805	1815570	.	+	.	ID=id349;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1814862	1815134	.	+	.	ID=gene1957;Dbxref=GeneID:18263067;Name=SDY_4682;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4682
NC_007606.1	RefSeq	CDS	1814862	1815134	.	+	0	ID=cds1737;Parent=gene1957;Dbxref=Genbank:YP_009000753.1,GeneID:18263067;Name=YP_009000753.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000753.1;transl_table=11
NC_007606.1	RefSeq	gene	1815161	1815556	.	+	.	ID=gene1958;Dbxref=GeneID:3797547;Name=SDY_2002;Note=SDY2002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2002
NC_007606.1	RefSeq	CDS	1815161	1815556	.	+	0	ID=cds1738;Parent=gene1958;Dbxref=Genbank:YP_403588.1,GeneID:3797547;Name=YP_403588.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403588.1;transl_table=11
NC_007606.1	RefSeq	gene	1816133	1817884	.	+	.	ID=gene1959;Dbxref=GeneID:3797548;Name=ipaH_5;Note=SDY2003;gbkey=Gene;gene=ipaH_5;gene_biotype=protein_coding;locus_tag=SDY_2003
NC_007606.1	RefSeq	CDS	1816133	1817884	.	+	0	ID=cds1739;Parent=gene1959;Dbxref=Genbank:YP_403589.1,GeneID:3797548;Name=YP_403589.1;Note=Code: S%3B COG: COG4886;gbkey=CDS;gene=ipaH_5;product=invasion plasmid antigen;protein_id=YP_403589.1;transl_table=11
NC_007606.1	RefSeq	region	1818145	1819410	.	-	.	ID=id350;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1818373	1819008	.	-	.	ID=gene1960;Dbxref=GeneID:3797549;Name=SDY_2004;Note=SDY2004;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2004;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1819408	1819680	.	-	.	ID=gene1961;Dbxref=GeneID:3797551;Name=SDY_2006;Note=SDY2006;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2006
NC_007606.1	RefSeq	CDS	1819408	1819680	.	-	0	ID=cds1740;Parent=gene1961;Dbxref=Genbank:YP_403592.1,GeneID:3797551;Name=YP_403592.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403592.1;transl_table=11
NC_007606.1	RefSeq	region	1819666	1820432	.	-	.	ID=id351;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1819681	1820076	.	-	.	ID=gene1962;Dbxref=GeneID:3797552;Name=SDY_2007;Note=SDY2007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2007
NC_007606.1	RefSeq	CDS	1819681	1820076	.	-	0	ID=cds1741;Parent=gene1962;Dbxref=Genbank:YP_403593.1,GeneID:3797552;Name=YP_403593.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403593.1;transl_table=11
NC_007606.1	RefSeq	gene	1820103	1820375	.	-	.	ID=gene1963;Dbxref=GeneID:18263068;Name=SDY_4683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4683
NC_007606.1	RefSeq	CDS	1820103	1820375	.	-	0	ID=cds1742;Parent=gene1963;Dbxref=Genbank:YP_009000754.1,GeneID:18263068;Name=YP_009000754.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000754.1;transl_table=11
NC_007606.1	RefSeq	region	1820433	1821688	.	+	.	ID=id352;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1820489	1820791	.	+	.	ID=gene1964;Dbxref=GeneID:3799904;Name=SDY_2008;Note=SDY2008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2008
NC_007606.1	RefSeq	CDS	1820489	1820791	.	+	0	ID=cds1743;Parent=gene1964;Dbxref=Genbank:YP_403594.1,GeneID:3799904;Name=YP_403594.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403594.1;transl_table=11
NC_007606.1	RefSeq	gene	1820827	1821645	.	+	.	ID=gene1965;Dbxref=GeneID:3799905;Name=SDY_2009;Note=SDY2009;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2009;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1821904	1822899	.	+	.	ID=gene1966;Dbxref=GeneID:3799907;Name=ybhE;Note=SDY2011;gbkey=Gene;gene=ybhE;gene_biotype=protein_coding;locus_tag=SDY_2011
NC_007606.1	RefSeq	CDS	1821904	1822899	.	+	0	ID=cds1744;Parent=gene1966;Dbxref=Genbank:YP_403597.1,GeneID:3799907;Name=YP_403597.1;Note=catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate;gbkey=CDS;gene=ybhE;product=6-phosphogluconolactonase;protein_id=YP_403597.1;transl_table=11
NC_007606.1	RefSeq	gene	1822940	1823392	.	-	.	ID=gene1967;Dbxref=GeneID:3799908;Name=SDY_2012;Note=SDY2012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2012
NC_007606.1	RefSeq	CDS	1822940	1823392	.	-	0	ID=cds1745;Parent=gene1967;Dbxref=Genbank:YP_403598.1,GeneID:3799908;Name=YP_403598.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403598.1;transl_table=11
NC_007606.1	RefSeq	region	1823430	1824195	.	-	.	ID=id353;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1823444	1823839	.	-	.	ID=gene1968;Dbxref=GeneID:3799909;Name=SDY_2013;Note=SDY2013;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2013
NC_007606.1	RefSeq	CDS	1823444	1823839	.	-	0	ID=cds1746;Parent=gene1968;Dbxref=Genbank:YP_403599.1,GeneID:3799909;Name=YP_403599.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403599.1;transl_table=11
NC_007606.1	RefSeq	gene	1823866	1824138	.	-	.	ID=gene1969;Dbxref=GeneID:18263069;Name=SDY_4684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4684
NC_007606.1	RefSeq	CDS	1823866	1824138	.	-	0	ID=cds1747;Parent=gene1969;Dbxref=Genbank:YP_009000755.1,GeneID:18263069;Name=YP_009000755.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000755.1;transl_table=11
NC_007606.1	RefSeq	gene	1824467	1824790	.	+	.	ID=gene1970;Dbxref=GeneID:3799911;Name=ycgW;Note=SDY2015;gbkey=Gene;gene=ycgW;gene_biotype=protein_coding;locus_tag=SDY_2015
NC_007606.1	RefSeq	CDS	1824467	1824790	.	+	0	ID=cds1748;Parent=gene1970;Dbxref=Genbank:YP_403601.1,GeneID:3799911;Name=YP_403601.1;gbkey=CDS;gene=ycgW;product=hypothetical protein;protein_id=YP_403601.1;transl_table=11
NC_007606.1	RefSeq	gene	1824893	1826143	.	-	.	ID=gene1971;Dbxref=GeneID:3799912;Name=icdA;Note=SDY2016;gbkey=Gene;gene=icdA;gene_biotype=protein_coding;locus_tag=SDY_2016
NC_007606.1	RefSeq	CDS	1824893	1826143	.	-	0	ID=cds1749;Parent=gene1971;Dbxref=Genbank:YP_403602.1,GeneID:3799912;Name=YP_403602.1;Note=Converts isocitrate to alpha ketoglutarate;gbkey=CDS;gene=icdA;product=isocitrate dehydrogenase;protein_id=YP_403602.1;transl_table=11
NC_007606.1	RefSeq	gene	1826345	1826968	.	+	.	ID=gene1972;Dbxref=GeneID:3799913;Name=ymfC;Note=SDY2017;gbkey=Gene;gene=ymfC;gene_biotype=protein_coding;locus_tag=SDY_2017
NC_007606.1	RefSeq	CDS	1826345	1826968	.	+	0	ID=cds1750;Parent=gene1972;Dbxref=Genbank:YP_403603.1,GeneID:3799913;Name=YP_403603.1;Note=catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA;gbkey=CDS;gene=ymfC;product=23S rRNA pseudouridine synthase E;protein_id=YP_403603.1;transl_table=11
NC_007606.1	RefSeq	gene	1826978	1827439	.	+	.	ID=gene1973;Dbxref=GeneID:3799914;Name=SDY_2018;Note=SDY2018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2018
NC_007606.1	RefSeq	CDS	1826978	1827439	.	+	0	ID=cds1751;Parent=gene1973;Dbxref=Genbank:YP_403604.1,GeneID:3799914;Name=YP_403604.1;Note=Code: LR%3B COG: COG0494;gbkey=CDS;product=phosphohydrolase;protein_id=YP_403604.1;transl_table=11
NC_007606.1	RefSeq	gene	1827493	1828599	.	+	.	ID=gene1974;Dbxref=GeneID:3799915;Name=mnmA;Note=SDY2019;gbkey=Gene;gene=mnmA;gene_biotype=protein_coding;locus_tag=SDY_2019
NC_007606.1	RefSeq	CDS	1827493	1828599	.	+	0	ID=cds1752;Parent=gene1974;Dbxref=Genbank:YP_403605.2,GeneID:3799915;Name=YP_403605.2;Note=catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs;gbkey=CDS;gene=mnmA;product=tRNA-specific 2-thiouridylase MnmA;protein_id=YP_403605.2;transl_table=11
NC_007606.1	RefSeq	gene	1828635	1829276	.	+	.	ID=gene1975;Dbxref=GeneID:3799916;Name=ycfC;Note=SDY2020;gbkey=Gene;gene=ycfC;gene_biotype=protein_coding;locus_tag=SDY_2020
NC_007606.1	RefSeq	CDS	1828635	1829276	.	+	0	ID=cds1753;Parent=gene1975;Dbxref=Genbank:YP_403606.1,GeneID:3799916;Name=YP_403606.1;Note=HflD%3B UPF0274%3B in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein%3B in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis;gbkey=CDS;gene=ycfC;product=hypothetical protein;protein_id=YP_403606.1;transl_table=11
NC_007606.1	RefSeq	gene	1829280	1830650	.	+	.	ID=gene1976;Dbxref=GeneID:3799917;Name=purB;Note=SDY2021;gbkey=Gene;gene=purB;gene_biotype=protein_coding;locus_tag=SDY_2021
NC_007606.1	RefSeq	CDS	1829280	1830650	.	+	0	ID=cds1754;Parent=gene1976;Dbxref=Genbank:YP_403607.1,GeneID:3799917;Name=YP_403607.1;Note=Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide;gbkey=CDS;gene=purB;product=adenylosuccinate lyase;protein_id=YP_403607.1;transl_table=11
NC_007606.1	RefSeq	gene	1830819	1831490	.	+	.	ID=gene1977;Dbxref=GeneID:3799918;Name=phoP;Note=SDY2022;gbkey=Gene;gene=phoP;gene_biotype=protein_coding;locus_tag=SDY_2022
NC_007606.1	RefSeq	CDS	1830819	1831490	.	+	0	ID=cds1755;Parent=gene1977;Dbxref=Genbank:YP_403608.1,GeneID:3799918;Name=YP_403608.1;Note=response regulator in two-component regulatory system with PhoQ%3B involved in magnesium starvation and stress;gbkey=CDS;gene=phoP;product=DNA-binding transcriptional regulator PhoP;protein_id=YP_403608.1;transl_table=11
NC_007606.1	RefSeq	gene	1831490	1832950	.	+	.	ID=gene1978;Dbxref=GeneID:3799919;Name=phoQ;Note=SDY2023;gbkey=Gene;gene=phoQ;gene_biotype=protein_coding;locus_tag=SDY_2023
NC_007606.1	RefSeq	CDS	1831490	1832950	.	+	0	ID=cds1756;Parent=gene1978;Dbxref=Genbank:YP_403609.1,GeneID:3799919;Name=YP_403609.1;Note=Code: T%3B COG: COG0642;gbkey=CDS;gene=phoQ;product=sensor protein PhoQ;protein_id=YP_403609.1;transl_table=11
NC_007606.1	RefSeq	gene	1833017	1834147	.	+	.	ID=gene1979;Dbxref=GeneID:3799920;Name=ycfD;Note=SDY2024;gbkey=Gene;gene=ycfD;gene_biotype=protein_coding;locus_tag=SDY_2024
NC_007606.1	RefSeq	CDS	1833017	1834147	.	+	0	ID=cds1757;Parent=gene1979;Dbxref=Genbank:YP_403610.1,GeneID:3799920;Name=YP_403610.1;Note=Code: S%3B COG: COG2850;gbkey=CDS;gene=ycfD;product=hypothetical protein;protein_id=YP_403610.1;transl_table=11
NC_007606.1	RefSeq	gene	1834196	1835422	.	-	.	ID=gene1980;Dbxref=GeneID:3799921;Name=pepT;Note=SDY2025;gbkey=Gene;gene=pepT;gene_biotype=protein_coding;locus_tag=SDY_2025
NC_007606.1	RefSeq	CDS	1834196	1835422	.	-	0	ID=cds1758;Parent=gene1980;Dbxref=Genbank:YP_403611.1,GeneID:3799921;Name=YP_403611.1;Note=catalyzes the release of the N-terminal amino acid from a tripeptide;gbkey=CDS;gene=pepT;product=peptidase T;protein_id=YP_403611.1;transl_table=11
NC_007606.1	RefSeq	gene	1835672	1836808	.	+	.	ID=gene1981;Dbxref=GeneID:3799922;Name=potA;Note=SDY2026;gbkey=Gene;gene=potA;gene_biotype=protein_coding;locus_tag=SDY_2026
NC_007606.1	RefSeq	CDS	1835672	1836808	.	+	0	ID=cds1759;Parent=gene1981;Dbxref=Genbank:YP_403612.1,GeneID:3799922;Name=YP_403612.1;Note=functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport%3B PotA is the membrane-associated ATPase;gbkey=CDS;gene=potA;product=putrescine/spermidine ABC transporter ATPase;protein_id=YP_403612.1;transl_table=11
NC_007606.1	RefSeq	gene	1836822	1837649	.	+	.	ID=gene1982;Dbxref=GeneID:3799768;Name=potB;Note=SDY2027;gbkey=Gene;gene=potB;gene_biotype=protein_coding;locus_tag=SDY_2027
NC_007606.1	RefSeq	CDS	1836822	1837649	.	+	0	ID=cds1760;Parent=gene1982;Dbxref=Genbank:YP_403613.1,GeneID:3799768;Name=YP_403613.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotB is a membrane component;gbkey=CDS;gene=potB;product=spermidine/putrescine ABC transporter permease;protein_id=YP_403613.1;transl_table=11
NC_007606.1	RefSeq	gene	1837646	1838440	.	+	.	ID=gene1983;Dbxref=GeneID:3799769;Name=potC;Note=SDY2028;gbkey=Gene;gene=potC;gene_biotype=protein_coding;locus_tag=SDY_2028
NC_007606.1	RefSeq	CDS	1837646	1838440	.	+	0	ID=cds1761;Parent=gene1983;Dbxref=Genbank:YP_403614.1,GeneID:3799769;Name=YP_403614.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotC is a membrane component;gbkey=CDS;gene=potC;product=spermidine/putrescine ABC transporter permease;protein_id=YP_403614.1;transl_table=11
NC_007606.1	RefSeq	gene	1838437	1839483	.	+	.	ID=gene1984;Dbxref=GeneID:3799770;Name=potD;Note=SDY2029;gbkey=Gene;gene=potD;gene_biotype=protein_coding;locus_tag=SDY_2029
NC_007606.1	RefSeq	CDS	1838437	1839483	.	+	0	ID=cds1762;Parent=gene1984;Dbxref=Genbank:YP_403615.1,GeneID:3799770;Name=YP_403615.1;Note=can transport spermidine and putrescine but affinity is higher for spermidine%3B forms a complex of PotA2BCD%3B PotD is a periplasmic component that binds the substrate;gbkey=CDS;gene=potD;product=spermidine/putrescine ABC transporter substrate-binding protein;protein_id=YP_403615.1;transl_table=11
NC_007606.1	RefSeq	gene	1839639	1840460	.	-	.	ID=gene1985;Dbxref=GeneID:3799771;Name=cobB;Note=SDY2030;gbkey=Gene;gene=cobB;gene_biotype=protein_coding;locus_tag=SDY_2030
NC_007606.1	RefSeq	CDS	1839639	1840460	.	-	0	ID=cds1763;Parent=gene1985;Dbxref=Genbank:YP_403616.1,GeneID:3799771;Name=YP_403616.1;Note=Modulates the activities of several enzymes which are inactive in their acetylated form;gbkey=CDS;gene=cobB;product=NAD-dependent deacetylase;protein_id=YP_403616.1;transl_table=11
NC_007606.1	RefSeq	gene	1840476	1841387	.	-	.	ID=gene1986;Dbxref=GeneID:3799772;Name=ycfX;Note=SDY2031;gbkey=Gene;gene=ycfX;gene_biotype=protein_coding;locus_tag=SDY_2031
NC_007606.1	RefSeq	CDS	1840476	1841387	.	-	0	ID=cds1764;Parent=gene1986;Dbxref=Genbank:YP_403617.1,GeneID:3799772;Name=YP_403617.1;Note=catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine;gbkey=CDS;gene=ycfX;product=N-acetyl-D-glucosamine kinase;protein_id=YP_403617.1;transl_table=11
NC_007606.1	RefSeq	gene	1841416	1842660	.	-	.	ID=gene1987;Dbxref=GeneID:3799773;Name=ycfW;Note=SDY2032;gbkey=Gene;gene=ycfW;gene_biotype=protein_coding;locus_tag=SDY_2032
NC_007606.1	RefSeq	CDS	1841416	1842660	.	-	0	ID=cds1765;Parent=gene1987;Dbxref=Genbank:YP_403618.1,GeneID:3799773;Name=YP_403618.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;gene=ycfW;product=outer membrane-specific lipoprotein transporter subunit LolE;protein_id=YP_403618.1;transl_table=11
NC_007606.1	RefSeq	gene	1842660	1843361	.	-	.	ID=gene1988;Dbxref=GeneID:3799774;Name=lolD;Note=SDY2033;gbkey=Gene;gene=lolD;gene_biotype=protein_coding;locus_tag=SDY_2033
NC_007606.1	RefSeq	CDS	1842660	1843361	.	-	0	ID=cds1766;Parent=gene1988;Dbxref=Genbank:YP_403619.2,GeneID:3799774;Name=YP_403619.2;Note=''outer membrane specific%3B part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins%2C from the inner membrane to the periplasmic chaperone'';gbkey=CDS;gene=lolD;product=lipoprotein ABC transporter ATP-binding subunit;protein_id=YP_403619.2;transl_table=11
NC_007606.1	RefSeq	gene	1843354	1844553	.	-	.	ID=gene1989;Dbxref=GeneID:3799775;Name=ycfU;Note=SDY2034;gbkey=Gene;gene=ycfU;gene_biotype=protein_coding;locus_tag=SDY_2034
NC_007606.1	RefSeq	CDS	1843354	1844553	.	-	0	ID=cds1767;Parent=gene1989;Dbxref=Genbank:YP_403620.1,GeneID:3799775;Name=YP_403620.1;Note=part of the ATP-dependent transport system LolCDE%3B responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane;gbkey=CDS;gene=ycfU;product=outer membrane-specific lipoprotein transporter subunit LolC;protein_id=YP_403620.1;transl_table=11
NC_007606.1	RefSeq	gene	1844815	1845888	.	+	.	ID=gene1990;Dbxref=GeneID:3799776;Name=ycfT;Note=SDY2035;gbkey=Gene;gene=ycfT;gene_biotype=protein_coding;locus_tag=SDY_2035
NC_007606.1	RefSeq	CDS	1844815	1845888	.	+	0	ID=cds1768;Parent=gene1990;Dbxref=Genbank:YP_403621.1,GeneID:3799776;Name=YP_403621.1;Note=Code: S%3B COG: COG4763;gbkey=CDS;gene=ycfT;product=hypothetical protein;protein_id=YP_403621.1;transl_table=11
NC_007606.1	RefSeq	gene	1846016	1849462	.	+	.	ID=gene1991;Dbxref=GeneID:3799777;Name=mfd;Note=SDY2036;gbkey=Gene;gene=mfd;gene_biotype=protein_coding;locus_tag=SDY_2036
NC_007606.1	RefSeq	CDS	1846016	1849462	.	+	0	ID=cds1769;Parent=gene1991;Dbxref=Genbank:YP_403622.1,GeneID:3799777;Name=YP_403622.1;Note=Code: LK%3B COG: COG1197;gbkey=CDS;gene=mfd;product=transcription-repair coupling factor;protein_id=YP_403622.1;transl_table=11
NC_007606.1	RefSeq	gene	1849604	1850566	.	+	.	ID=gene1992;Dbxref=GeneID:3799778;Name=ycfS;Note=SDY2037;gbkey=Gene;gene=ycfS;gene_biotype=protein_coding;locus_tag=SDY_2037
NC_007606.1	RefSeq	CDS	1849604	1850566	.	+	0	ID=cds1770;Parent=gene1992;Dbxref=Genbank:YP_403623.1,GeneID:3799778;Name=YP_403623.1;Note=Code: S%3B COG: COG1376;gbkey=CDS;gene=ycfS;product=hypothetical protein;protein_id=YP_403623.1;transl_table=11
NC_007606.1	RefSeq	gene	1850649	1850906	.	-	.	ID=gene1993;Dbxref=GeneID:3799779;Name=ycfR;Note=SDY2038;gbkey=Gene;gene=ycfR;gene_biotype=protein_coding;locus_tag=SDY_2038
NC_007606.1	RefSeq	CDS	1850649	1850906	.	-	0	ID=cds1771;Parent=gene1993;Dbxref=Genbank:YP_403624.1,GeneID:3799779;Name=YP_403624.1;gbkey=CDS;gene=ycfR;product=hypothetical protein;protein_id=YP_403624.1;transl_table=11
NC_007606.1	RefSeq	gene	1851069	1851779	.	+	.	ID=gene1994;Dbxref=GeneID:3799780;Name=ycfQ;Note=SDY2039;gbkey=Gene;gene=ycfQ;gene_biotype=protein_coding;locus_tag=SDY_2039
NC_007606.1	RefSeq	CDS	1851069	1851779	.	+	0	ID=cds1772;Parent=gene1994;Dbxref=Genbank:YP_403625.1,GeneID:3799780;Name=YP_403625.1;Note=Code: K%3B COG: COG1309;gbkey=CDS;gene=ycfQ;product=hypothetical protein;protein_id=YP_403625.1;transl_table=11
NC_007606.1	RefSeq	gene	1851841	1852380	.	-	.	ID=gene1995;Dbxref=GeneID:3799781;Name=ycfJ;Note=SDY2040;gbkey=Gene;gene=ycfJ;gene_biotype=protein_coding;locus_tag=SDY_2040
NC_007606.1	RefSeq	CDS	1851841	1852380	.	-	0	ID=cds1773;Parent=gene1995;Dbxref=Genbank:YP_403626.1,GeneID:3799781;Name=YP_403626.1;Note=Code: S%3B COG: COG3134;gbkey=CDS;gene=ycfJ;product=hypothetical protein;protein_id=YP_403626.1;transl_table=11
NC_007606.1	RefSeq	gene	1852607	1853911	.	-	.	ID=gene1996;Dbxref=GeneID:3799782;Name=ndh;Note=SDY2041;gbkey=Gene;gene=ndh;gene_biotype=protein_coding;locus_tag=SDY_2041
NC_007606.1	RefSeq	CDS	1852607	1853911	.	-	0	ID=cds1774;Parent=gene1996;Dbxref=Genbank:YP_403627.1,GeneID:3799782;Name=YP_403627.1;Note=Code: C%3B COG: COG1252;gbkey=CDS;gene=ndh;product=respiratory NADH dehydrogenase;protein_id=YP_403627.1;transl_table=11
NC_007606.1	RefSeq	gene	1854317	1854859	.	-	.	ID=gene1997;Dbxref=GeneID:3799783;Name=ycfP;Note=SDY2042;gbkey=Gene;gene=ycfP;gene_biotype=protein_coding;locus_tag=SDY_2042
NC_007606.1	RefSeq	CDS	1854317	1854859	.	-	0	ID=cds1775;Parent=gene1997;Dbxref=Genbank:YP_403628.2,GeneID:3799783;Name=YP_403628.2;Note=Code: R%3B COG: COG3150;gbkey=CDS;gene=ycfP;product=hypothetical protein;protein_id=YP_403628.2;transl_table=11
NC_007606.1	RefSeq	gene	1854882	1855907	.	-	.	ID=gene1998;Dbxref=GeneID:3799784;Name=ycfO;Note=SDY2043;gbkey=Gene;gene=ycfO;gene_biotype=protein_coding;locus_tag=SDY_2043
NC_007606.1	RefSeq	CDS	1854882	1855907	.	-	0	ID=cds1776;Parent=gene1998;Dbxref=Genbank:YP_403629.1,GeneID:3799784;Name=YP_403629.1;Note=hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides;gbkey=CDS;gene=ycfO;product=beta-hexosaminidase;protein_id=YP_403629.1;transl_table=11
NC_007606.1	RefSeq	gene	1855918	1856742	.	-	.	ID=gene1999;Dbxref=GeneID:3799785;Name=thiK;Note=SDY2044;gbkey=Gene;gene=thiK;gene_biotype=protein_coding;locus_tag=SDY_2044
NC_007606.1	RefSeq	CDS	1855918	1856742	.	-	0	ID=cds1777;Parent=gene1999;Dbxref=Genbank:YP_403630.1,GeneID:3799785;Name=YP_403630.1;Note=catalyzes the phosphorylation of thiamine to thiamine phosphate;gbkey=CDS;gene=thiK;product=thiamine kinase;protein_id=YP_403630.1;transl_table=11
NC_007606.1	RefSeq	gene	1856723	1857364	.	-	.	ID=gene2000;Dbxref=GeneID:3799786;Name=ycfM;Note=SDY2045;gbkey=Gene;gene=ycfM;gene_biotype=protein_coding;locus_tag=SDY_2045
NC_007606.1	RefSeq	CDS	1856723	1857364	.	-	0	ID=cds1778;Parent=gene2000;Dbxref=Genbank:YP_403631.1,GeneID:3799786;Name=YP_403631.1;Note=Code: R%3B COG: COG3417;gbkey=CDS;gene=ycfM;product=hypothetical protein;protein_id=YP_403631.1;transl_table=11
NC_007606.1	RefSeq	gene	1857378	1857755	.	-	.	ID=gene2001;Dbxref=GeneID:3799787;Name=ycfL;Note=SDY2046;gbkey=Gene;gene=ycfL;gene_biotype=protein_coding;locus_tag=SDY_2046
NC_007606.1	RefSeq	CDS	1857378	1857755	.	-	0	ID=cds1779;Parent=gene2001;Dbxref=Genbank:YP_403632.1,GeneID:3799787;Name=YP_403632.1;Note=Code: R%3B COG: COG5633;gbkey=CDS;gene=ycfL;product=hypothetical protein;protein_id=YP_403632.1;transl_table=11
NC_007606.1	RefSeq	gene	1857758	1858117	.	-	.	ID=gene2002;Dbxref=GeneID:3799518;Name=ycfF;Note=SDY2047;gbkey=Gene;gene=ycfF;gene_biotype=protein_coding;locus_tag=SDY_2047
NC_007606.1	RefSeq	CDS	1857758	1858117	.	-	0	ID=cds1780;Parent=gene2002;Dbxref=Genbank:YP_403633.1,GeneID:3799518;Name=YP_403633.1;Note=Code: FGR%3B COG: COG0537;gbkey=CDS;gene=ycfF;product=purine nucleoside phosphoramidase;protein_id=YP_403633.1;transl_table=11
NC_007606.1	RefSeq	gene	1858440	1860629	.	+	.	ID=gene2003;Dbxref=GeneID:3799519;Name=fhuE;Note=SDY2048;gbkey=Gene;gene=fhuE;gene_biotype=protein_coding;locus_tag=SDY_2048
NC_007606.1	RefSeq	CDS	1858440	1860629	.	+	0	ID=cds1781;Parent=gene2003;Dbxref=Genbank:YP_403634.1,GeneID:3799519;Name=YP_403634.1;Note=Code: P%3B COG: COG4773;gbkey=CDS;gene=fhuE;product=ferric-rhodotorulic acid outer membrane transporter;protein_id=YP_403634.1;transl_table=11
NC_007606.1	RefSeq	gene	1860689	1862122	.	-	.	ID=gene2004;Dbxref=GeneID:3799520;Name=ptsG;Note=SDY2049;gbkey=Gene;gene=ptsG;gene_biotype=protein_coding;locus_tag=SDY_2049
NC_007606.1	RefSeq	CDS	1860689	1862122	.	-	0	ID=cds1782;Parent=gene2004;Dbxref=Genbank:YP_403635.1,GeneID:3799520;Name=YP_403635.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;gene=ptsG;product=PTS system glucose-specific transporter subunit IIBC;protein_id=YP_403635.1;transl_table=11
NC_007606.1	RefSeq	gene	1862417	1863214	.	-	.	ID=gene2005;Dbxref=GeneID:3799521;Name=ycfH;Note=SDY2050;gbkey=Gene;gene=ycfH;gene_biotype=protein_coding;locus_tag=SDY_2050
NC_007606.1	RefSeq	CDS	1862417	1863214	.	-	0	ID=cds1783;Parent=gene2005;Dbxref=Genbank:YP_403636.1,GeneID:3799521;Name=YP_403636.1;Note=Code: L%3B COG: COG0084;gbkey=CDS;gene=ycfH;product=metallodependent hydrolase;protein_id=YP_403636.1;transl_table=11
NC_007606.1	RefSeq	gene	1863225	1864229	.	-	.	ID=gene2006;Dbxref=GeneID:3799522;Name=holB;Note=SDY2051;gbkey=Gene;gene=holB;gene_biotype=protein_coding;locus_tag=SDY_2051
NC_007606.1	RefSeq	CDS	1863225	1864229	.	-	0	ID=cds1784;Parent=gene2006;Dbxref=Genbank:YP_403637.1,GeneID:3799522;Name=YP_403637.1;Note=catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand%3B the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA;gbkey=CDS;gene=holB;product=DNA polymerase III subunit delta';protein_id=YP_403637.1;transl_table=11
NC_007606.1	RefSeq	gene	1864226	1864867	.	-	.	ID=gene2007;Dbxref=GeneID:3799523;Name=tmk;Note=SDY2052;gbkey=Gene;gene=tmk;gene_biotype=protein_coding;locus_tag=SDY_2052
NC_007606.1	RefSeq	CDS	1864226	1864867	.	-	0	ID=cds1785;Parent=gene2007;Dbxref=Genbank:YP_403638.1,GeneID:3799523;Name=YP_403638.1;Note=catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP);gbkey=CDS;gene=tmk;product=thymidylate kinase;protein_id=YP_403638.1;transl_table=11
NC_007606.1	RefSeq	gene	1864857	1865879	.	-	.	ID=gene2008;Dbxref=GeneID:3799524;Name=yceG;Note=SDY2053;gbkey=Gene;gene=yceG;gene_biotype=protein_coding;locus_tag=SDY_2053
NC_007606.1	RefSeq	CDS	1864857	1865879	.	-	0	ID=cds1786;Parent=gene2008;Dbxref=Genbank:YP_403639.1,GeneID:3799524;Name=YP_403639.1;Note=Code: R%3B COG: COG1559;gbkey=CDS;gene=yceG;product=hypothetical protein;protein_id=YP_403639.1;transl_table=11
NC_007606.1	RefSeq	gene	1865882	1866691	.	-	.	ID=gene2009;Dbxref=GeneID:3799525;Name=pabC;Note=SDY2054;gbkey=Gene;gene=pabC;gene_biotype=protein_coding;locus_tag=SDY_2054
NC_007606.1	RefSeq	CDS	1865882	1866691	.	-	0	ID=cds1787;Parent=gene2009;Dbxref=Genbank:YP_403640.1,GeneID:3799525;Name=YP_403640.1;Note=catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate;gbkey=CDS;gene=pabC;product=4-amino-4-deoxychorismate lyase;protein_id=YP_403640.1;transl_table=11
NC_007606.1	RefSeq	gene	1866811	1868052	.	-	.	ID=gene2010;Dbxref=GeneID:3799526;Name=fabF;Note=SDY2055;gbkey=Gene;gene=fabF;gene_biotype=protein_coding;locus_tag=SDY_2055
NC_007606.1	RefSeq	CDS	1866811	1868052	.	-	0	ID=cds1788;Parent=gene2010;Dbxref=Genbank:YP_403641.1,GeneID:3799526;Name=YP_403641.1;Note=''FabF%3B beta-ketoacyl-ACP synthase II%2C KASII%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP'';gbkey=CDS;gene=fabF;product=3-oxoacyl-ACP synthase;protein_id=YP_403641.1;transl_table=11
NC_007606.1	RefSeq	gene	1868138	1868374	.	-	.	ID=gene2011;Dbxref=GeneID:3799527;Name=acpP;Note=SDY2056;gbkey=Gene;gene=acpP;gene_biotype=protein_coding;locus_tag=SDY_2056
NC_007606.1	RefSeq	CDS	1868138	1868374	.	-	0	ID=cds1789;Parent=gene2011;Dbxref=Genbank:YP_403642.1,GeneID:3799527;Name=YP_403642.1;Note=carries the fatty acid chain in fatty acid biosynthesis;gbkey=CDS;gene=acpP;product=acyl carrier protein;protein_id=YP_403642.1;transl_table=11
NC_007606.1	RefSeq	gene	1868585	1869319	.	-	.	ID=gene2012;Dbxref=GeneID:3799528;Name=fabG;Note=SDY2057;gbkey=Gene;gene=fabG;gene_biotype=protein_coding;locus_tag=SDY_2057
NC_007606.1	RefSeq	CDS	1868585	1869319	.	-	0	ID=cds1790;Parent=gene2012;Dbxref=Genbank:YP_403643.1,GeneID:3799528;Name=YP_403643.1;Note=catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis;gbkey=CDS;gene=fabG;product=3-ketoacyl-ACP reductase;protein_id=YP_403643.1;transl_table=11
NC_007606.1	RefSeq	gene	1869332	1870261	.	-	.	ID=gene2013;Dbxref=GeneID:3799529;Name=fabD;Note=SDY2058;gbkey=Gene;gene=fabD;gene_biotype=protein_coding;locus_tag=SDY_2058
NC_007606.1	RefSeq	CDS	1869332	1870261	.	-	0	ID=cds1791;Parent=gene2013;Dbxref=Genbank:YP_403644.1,GeneID:3799529;Name=YP_403644.1;Note=Code: I%3B COG: COG0331;gbkey=CDS;gene=fabD;product=malonyl CoA-ACP transacylase;protein_id=YP_403644.1;transl_table=11
NC_007606.1	RefSeq	gene	1870277	1871230	.	-	.	ID=gene2014;Dbxref=GeneID:3799530;Name=fabH;Note=SDY2059;gbkey=Gene;gene=fabH;gene_biotype=protein_coding;locus_tag=SDY_2059
NC_007606.1	RefSeq	CDS	1870277	1871230	.	-	0	ID=cds1792;Parent=gene2014;Dbxref=Genbank:YP_403645.1,GeneID:3799530;Name=YP_403645.1;Note=FabH%3B beta-ketoacyl-acyl carrier protein synthase III%3B catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation%3B differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs;gbkey=CDS;gene=fabH;product=3-oxoacyl-ACP synthase;protein_id=YP_403645.1;transl_table=11
NC_007606.1	RefSeq	gene	1871298	1872368	.	-	.	ID=gene2015;Dbxref=GeneID:3799531;Name=plsX;Note=SDY2060;gbkey=Gene;gene=plsX;gene_biotype=protein_coding;locus_tag=SDY_2060
NC_007606.1	RefSeq	CDS	1871298	1872368	.	-	0	ID=cds1793;Parent=gene2015;Dbxref=Genbank:YP_403646.2,GeneID:3799531;Name=YP_403646.2;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsY;gbkey=CDS;gene=plsX;product=glycerol-3-phosphate acyltransferase PlsX;protein_id=YP_403646.2;transl_table=11
NC_007606.1	RefSeq	gene	1872449	1872622	.	-	.	ID=gene2016;Dbxref=GeneID:3799532;Name=rpmF;Note=SDY2061;gbkey=Gene;gene=rpmF;gene_biotype=protein_coding;locus_tag=SDY_2061
NC_007606.1	RefSeq	CDS	1872449	1872622	.	-	0	ID=cds1794;Parent=gene2016;Dbxref=Genbank:YP_403647.1,GeneID:3799532;Name=YP_403647.1;Note=some L32 proteins have zinc finger motifs consisting of CXXC while others do not;gbkey=CDS;gene=rpmF;product=50S ribosomal protein L32;protein_id=YP_403647.1;transl_table=11
NC_007606.1	RefSeq	gene	1872674	1873195	.	-	.	ID=gene2017;Dbxref=GeneID:3799533;Name=yceD;Note=SDY2062;gbkey=Gene;gene=yceD;gene_biotype=protein_coding;locus_tag=SDY_2062
NC_007606.1	RefSeq	CDS	1872674	1873195	.	-	0	ID=cds1795;Parent=gene2017;Dbxref=Genbank:YP_403648.1,GeneID:3799533;Name=YP_403648.1;Note=Code: R%3B COG: COG1399;gbkey=CDS;gene=yceD;product=hypothetical protein;protein_id=YP_403648.1;transl_table=11
NC_007606.1	RefSeq	region	1873754	1874519	.	-	.	ID=id354;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1873768	1874163	.	-	.	ID=gene2018;Dbxref=GeneID:3799534;Name=SDY_2063;Note=SDY2063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2063
NC_007606.1	RefSeq	CDS	1873768	1874163	.	-	0	ID=cds1796;Parent=gene2018;Dbxref=Genbank:YP_403649.1,GeneID:3799534;Name=YP_403649.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403649.1;transl_table=11
NC_007606.1	RefSeq	gene	1874864	1875823	.	-	.	ID=gene2019;Dbxref=GeneID:3799536;Name=yceC;Note=SDY2065;gbkey=Gene;gene=yceC;gene_biotype=protein_coding;locus_tag=SDY_2065
NC_007606.1	RefSeq	CDS	1874864	1875823	.	-	0	ID=cds1797;Parent=gene2019;Dbxref=Genbank:YP_403651.1,GeneID:3799536;Name=YP_403651.1;Note=''catalyzes the transformation of uracil to pseudouracil at nucleotides U955%2C U2504%2C and U2580 in 23S rRNA'';gbkey=CDS;gene=yceC;product=23S rRNA pseudouridylate synthase C;protein_id=YP_403651.1;transl_table=11
NC_007606.1	RefSeq	gene	1875941	1876315	.	-	.	ID=gene2020;Dbxref=GeneID:3799498;Name=SDY_2066;Note=SDY2066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2066
NC_007606.1	RefSeq	CDS	1875941	1876315	.	-	0	ID=cds1798;Parent=gene2020;Dbxref=Genbank:YP_403652.1,GeneID:3799498;Name=YP_403652.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403652.1;transl_table=11
NC_007606.1	RefSeq	gene	1876396	1879581	.	+	.	ID=gene2021;Dbxref=GeneID:3799499;Name=rne;Note=SDY2067;gbkey=Gene;gene=rne;gene_biotype=protein_coding;locus_tag=SDY_2067
NC_007606.1	RefSeq	CDS	1876396	1879581	.	+	0	ID=cds1799;Parent=gene2021;Dbxref=Genbank:YP_403653.1,GeneID:3799499;Name=YP_403653.1;Note=''bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein%3B forms part of the membrane-associated degradosome complex along with PNPase%2C RhlB%2C and enolase'';gbkey=CDS;gene=rne;product=ribonuclease E;protein_id=YP_403653.1;transl_table=11
NC_007606.1	RefSeq	gene	1879776	1880721	.	-	.	ID=gene2022;Dbxref=GeneID:3799500;Name=flgL;Note=SDY2068;gbkey=Gene;gene=flgL;gene_biotype=pseudogene;locus_tag=SDY_2068;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1880733	1882361	.	-	.	ID=gene2023;Dbxref=GeneID:3799501;Name=flgK;Note=''SDY2069%3B contains in-frame stop codon%3B original product: flagellar biosynthesis%2C hook-filament junction protein 1'';gbkey=Gene;gene=flgK;gene_biotype=pseudogene;locus_tag=SDY_2069;pseudo=true
NC_007606.1	RefSeq	gene	1882427	1883368	.	-	.	ID=gene2024;Dbxref=GeneID:3799502;Name=flgJ;Note=SDY2070;gbkey=Gene;gene=flgJ;gene_biotype=protein_coding;locus_tag=SDY_2070
NC_007606.1	RefSeq	CDS	1882427	1883368	.	-	0	ID=cds1800;Parent=gene2024;Dbxref=Genbank:YP_403655.1,GeneID:3799502;Name=YP_403655.1;Note=Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space;gbkey=CDS;gene=flgJ;product=flagellar rod assembly protein/muramidase FlgJ;protein_id=YP_403655.1;transl_table=11
NC_007606.1	RefSeq	gene	1883368	1884465	.	-	.	ID=gene2025;Dbxref=GeneID:3799503;Name=flgI;Note=SDY2071;gbkey=Gene;gene=flgI;gene_biotype=protein_coding;locus_tag=SDY_2071
NC_007606.1	RefSeq	CDS	1883368	1884465	.	-	0	ID=cds1801;Parent=gene2025;Dbxref=Genbank:YP_403656.1,GeneID:3799503;Name=YP_403656.1;Note=''part of the basal body which consists of four rings L%2C P%2C S%2C and M mounted on a central rod%3B Vibrio parahaemolyticus%2C Yersinia%2C Bradyrhizobium and other bacteria have two copies of this and other flagellar genes%3B the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum'';gbkey=CDS;gene=flgI;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=YP_403656.1;transl_table=11
NC_007606.1	RefSeq	gene	1884477	1885175	.	-	.	ID=gene2026;Dbxref=GeneID:3799504;Name=flgH;Note=SDY2072;gbkey=Gene;gene=flgH;gene_biotype=protein_coding;locus_tag=SDY_2072
NC_007606.1	RefSeq	CDS	1884477	1885175	.	-	0	ID=cds1802;Parent=gene2026;Dbxref=Genbank:YP_403657.1,GeneID:3799504;Name=YP_403657.1;Note=''part of the flagellar basal body which consists of four rings L%2CP%2C S and M mounted on a central rod'';gbkey=CDS;gene=flgH;product=flagellar basal body L-ring protein;protein_id=YP_403657.1;transl_table=11
NC_007606.1	RefSeq	gene	1885228	1886010	.	-	.	ID=gene2027;Dbxref=GeneID:3799505;Name=flgG;Note=''SDY2073%3B contains in-frame stop codon%3B original product: flagellar biosynthesis%2C cell-distal portion of basal-body rod'';gbkey=Gene;gene=flgG;gene_biotype=pseudogene;locus_tag=SDY_2073;pseudo=true
NC_007606.1	RefSeq	gene	1886148	1886899	.	-	.	ID=gene2028;Dbxref=GeneID:3799506;Name=flgF;Note=''SDY2074%3B frameshift%3B original product: flagellar biosynthesis%2C cell-proximal portion of basal-body rod'';gbkey=Gene;gene=flgF;gene_biotype=pseudogene;locus_tag=SDY_2074;pseudo=true
NC_007606.1	RefSeq	gene	1886919	1888127	.	-	.	ID=gene2029;Dbxref=GeneID:3799507;Name=flgE;Note=SDY2075;gbkey=Gene;gene=flgE;gene_biotype=protein_coding;locus_tag=SDY_2075
NC_007606.1	RefSeq	CDS	1886919	1888127	.	-	0	ID=cds1803;Parent=gene2029;Dbxref=Genbank:YP_403658.1,GeneID:3799507;Name=YP_403658.1;Note=the hook connects flagellar basal body to the flagellar filament;gbkey=CDS;gene=flgE;product=flagellar hook protein FlgE;protein_id=YP_403658.1;transl_table=11
NC_007606.1	RefSeq	gene	1888152	1888847	.	-	.	ID=gene2030;Dbxref=GeneID:3799508;Name=flgD;Note=SDY2076;gbkey=Gene;gene=flgD;gene_biotype=protein_coding;locus_tag=SDY_2076
NC_007606.1	RefSeq	CDS	1888152	1888847	.	-	0	ID=cds1804;Parent=gene2030;Dbxref=Genbank:YP_403659.1,GeneID:3799508;Name=YP_403659.1;Note=''acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod%3B Yersinia%2C Vibrio parahaemolyticus%2C Bradyrhizobium and other organisms have 2 copies of some flagellar genes%3B in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production'';gbkey=CDS;gene=flgD;product=flagellar basal body rod modification protein;protein_id=YP_403659.1;transl_table=11
NC_007606.1	RefSeq	gene	1888859	1889263	.	-	.	ID=gene2031;Dbxref=GeneID:3799509;Name=flgC;Note=SDY2077;gbkey=Gene;gene=flgC;gene_biotype=protein_coding;locus_tag=SDY_2077
NC_007606.1	RefSeq	CDS	1888859	1889263	.	-	0	ID=cds1805;Parent=gene2031;Dbxref=Genbank:YP_403660.1,GeneID:3799509;Name=YP_403660.1;Note=with FlgF and B makes up the proximal portion of the flagellar basal body rod;gbkey=CDS;gene=flgC;product=flagellar basal body rod protein FlgC;protein_id=YP_403660.1;transl_table=11
NC_007606.1	RefSeq	gene	1889267	1889683	.	-	.	ID=gene2032;Dbxref=GeneID:3799510;Name=flgB;Note=SDY2078;gbkey=Gene;gene=flgB;gene_biotype=protein_coding;locus_tag=SDY_2078
NC_007606.1	RefSeq	CDS	1889267	1889683	.	-	0	ID=cds1806;Parent=gene2032;Dbxref=Genbank:YP_403661.1,GeneID:3799510;Name=YP_403661.1;Note=with FlgF and C makes up the proximal portion of the flagellar basal body rod%3B Vibrio parahaemolyticus protein is associated with the polar flagella;gbkey=CDS;gene=flgB;product=flagellar basal-body rod protein FlgB;protein_id=YP_403661.1;transl_table=11
NC_007606.1	RefSeq	region	1889706	1890475	.	+	.	ID=id355;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1889767	1890039	.	+	.	ID=gene2033;Dbxref=GeneID:18263070;Name=SDY_4685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4685
NC_007606.1	RefSeq	CDS	1889767	1890039	.	+	0	ID=cds1807;Parent=gene2033;Dbxref=Genbank:YP_009000756.1,GeneID:18263070;Name=YP_009000756.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000756.1;transl_table=11
NC_007606.1	RefSeq	gene	1890066	1890461	.	+	.	ID=gene2034;Dbxref=GeneID:3799511;Name=SDY_2079;Note=SDY2079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2079
NC_007606.1	RefSeq	CDS	1890066	1890461	.	+	0	ID=cds1808;Parent=gene2034;Dbxref=Genbank:YP_403662.1,GeneID:3799511;Name=YP_403662.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403662.1;transl_table=11
NC_007606.1	RefSeq	gene	1890612	1891271	.	+	.	ID=gene2035;Dbxref=GeneID:3799512;Name=flgA;Note=SDY2080;gbkey=Gene;gene=flgA;gene_biotype=protein_coding;locus_tag=SDY_2080
NC_007606.1	RefSeq	CDS	1890612	1891271	.	+	0	ID=cds1809;Parent=gene2035;Dbxref=Genbank:YP_403663.1,GeneID:3799512;Name=YP_403663.1;Note=required for the assembly of the flagellar basal body P-ring;gbkey=CDS;gene=flgA;product=flagellar basal body P-ring biosynthesis protein FlgA;protein_id=YP_403663.1;transl_table=11
NC_007606.1	RefSeq	gene	1891347	1891640	.	+	.	ID=gene2036;Dbxref=GeneID:3799513;Name=flgM;Note=SDY2081;gbkey=Gene;gene=flgM;gene_biotype=protein_coding;locus_tag=SDY_2081
NC_007606.1	RefSeq	CDS	1891347	1891640	.	+	0	ID=cds1810;Parent=gene2036;Dbxref=Genbank:YP_403664.1,GeneID:3799513;Name=YP_403664.1;Note=regulates the flagellar specific sigma28 transcription factor;gbkey=CDS;gene=flgM;product=anti-sigma-28 factor FlgM;protein_id=YP_403664.1;transl_table=11
NC_007606.1	RefSeq	gene	1891645	1892054	.	+	.	ID=gene2037;Dbxref=GeneID:3799514;Name=flgN;Note=SDY2082%3B frameshift%3B original product: protein of flagellar biosynthesis;gbkey=Gene;gene=flgN;gene_biotype=pseudogene;locus_tag=SDY_2082;pseudo=true
NC_007606.1	RefSeq	gene	1892093	1893628	.	-	.	ID=gene2038;Dbxref=GeneID:3799515;Name=mviN;Note=SDY2083;gbkey=Gene;gene=mviN;gene_biotype=protein_coding;locus_tag=SDY_2083
NC_007606.1	RefSeq	CDS	1892093	1893628	.	-	0	ID=cds1811;Parent=gene2038;Dbxref=Genbank:YP_403665.1,GeneID:3799515;Name=YP_403665.1;Note=Code: R%3B COG: COG0728;gbkey=CDS;gene=mviN;product=virulence factor;protein_id=YP_403665.1;transl_table=11
NC_007606.1	RefSeq	gene	1893738	1894661	.	-	.	ID=gene2039;Dbxref=GeneID:3799516;Name=mviM;Note=SDY2084;gbkey=Gene;gene=mviM;gene_biotype=protein_coding;locus_tag=SDY_2084
NC_007606.1	RefSeq	CDS	1893738	1894661	.	-	0	ID=cds1812;Parent=gene2039;Dbxref=Genbank:YP_403666.1,GeneID:3799516;Name=YP_403666.1;Note=Code: R%3B COG: COG0673;gbkey=CDS;gene=mviM;product=virulence factor;protein_id=YP_403666.1;transl_table=11
NC_007606.1	RefSeq	gene	1894663	1895310	.	-	.	ID=gene2040;Dbxref=GeneID:3799517;Name=yceH;Note=SDY2085;gbkey=Gene;gene=yceH;gene_biotype=protein_coding;locus_tag=SDY_2085
NC_007606.1	RefSeq	CDS	1894663	1895310	.	-	0	ID=cds1813;Parent=gene2040;Dbxref=Genbank:YP_403667.1,GeneID:3799517;Name=YP_403667.1;Note=Code: S%3B COG: COG3132;gbkey=CDS;gene=yceH;product=hypothetical protein;protein_id=YP_403667.1;transl_table=11
NC_007606.1	RefSeq	gene	1895321	1895905	.	-	.	ID=gene2041;Dbxref=GeneID:3798842;Name=rimJ;Note=SDY2086;gbkey=Gene;gene=rimJ;gene_biotype=protein_coding;locus_tag=SDY_2086
NC_007606.1	RefSeq	CDS	1895321	1895905	.	-	0	ID=cds1814;Parent=gene2041;Dbxref=Genbank:YP_403668.1,GeneID:3798842;Name=YP_403668.1;Note=Code: J%3B COG: COG1670;gbkey=CDS;gene=rimJ;product=ribosomal-protein-S5-alanine N-acetyltransferase;protein_id=YP_403668.1;transl_table=11
NC_007606.1	RefSeq	region	1896054	1896836	.	-	.	ID=id356;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1896075	1896470	.	-	.	ID=gene2042;Dbxref=GeneID:3798843;Name=SDY_2087;Note=SDY2087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2087
NC_007606.1	RefSeq	CDS	1896075	1896470	.	-	0	ID=cds1815;Parent=gene2042;Dbxref=Genbank:YP_403669.1,GeneID:3798843;Name=YP_403669.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403669.1;transl_table=11
NC_007606.1	RefSeq	gene	1896497	1896769	.	-	.	ID=gene2043;Dbxref=GeneID:18263071;Name=SDY_4686;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4686
NC_007606.1	RefSeq	CDS	1896497	1896769	.	-	0	ID=cds1816;Parent=gene2043;Dbxref=Genbank:YP_009000757.1,GeneID:18263071;Name=YP_009000757.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000757.1;transl_table=11
NC_007606.1	RefSeq	gene	1896915	1898121	.	+	.	ID=gene2044;Dbxref=GeneID:3798844;Name=yceL;Note=SDY2088;gbkey=Gene;gene=yceL;gene_biotype=pseudogene;locus_tag=SDY_2088;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1898185	1898832	.	+	.	ID=gene2045;Dbxref=GeneID:3798845;Name=grxB;Note=SDY2089;gbkey=Gene;gene=grxB;gene_biotype=protein_coding;locus_tag=SDY_2089
NC_007606.1	RefSeq	CDS	1898185	1898832	.	+	0	ID=cds1817;Parent=gene2045;Dbxref=Genbank:YP_403671.1,GeneID:3798845;Name=YP_403671.1;Note=cofactor involved in the reduction of disulfides;gbkey=CDS;gene=grxB;product=glutaredoxin;protein_id=YP_403671.1;transl_table=11
NC_007606.1	RefSeq	gene	1898966	1899526	.	+	.	ID=gene2046;Dbxref=GeneID:3798846;Name=yceB;Note=SDY2090;gbkey=Gene;gene=yceB;gene_biotype=protein_coding;locus_tag=SDY_2090
NC_007606.1	RefSeq	CDS	1898966	1899526	.	+	0	ID=cds1818;Parent=gene2046;Dbxref=Genbank:YP_403672.1,GeneID:3798846;Name=YP_403672.1;gbkey=CDS;gene=yceB;product=hypothetical protein;protein_id=YP_403672.1;transl_table=11
NC_007606.1	RefSeq	gene	1899632	1900678	.	+	.	ID=gene2047;Dbxref=GeneID:3798847;Name=pyrC;Note=SDY2091;gbkey=Gene;gene=pyrC;gene_biotype=protein_coding;locus_tag=SDY_2091
NC_007606.1	RefSeq	CDS	1899632	1900678	.	+	0	ID=cds1819;Parent=gene2047;Dbxref=Genbank:YP_403673.1,GeneID:3798847;Name=YP_403673.1;Note=catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis;gbkey=CDS;gene=pyrC;product=dihydroorotase;protein_id=YP_403673.1;transl_table=11
NC_007606.1	RefSeq	gene	1900752	1900997	.	+	.	ID=gene2048;Dbxref=GeneID:3798848;Name=dinI;Note=SDY2092;gbkey=Gene;gene=dinI;gene_biotype=protein_coding;locus_tag=SDY_2092
NC_007606.1	RefSeq	CDS	1900752	1900997	.	+	0	ID=cds1820;Parent=gene2048;Dbxref=Genbank:YP_403674.1,GeneID:3798848;Name=YP_403674.1;gbkey=CDS;gene=dinI;product=DNA damage-inducible protein I;protein_id=YP_403674.1;transl_table=11
NC_007606.1	RefSeq	region	1901059	1901828	.	-	.	ID=id357;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1901073	1901468	.	-	.	ID=gene2049;Dbxref=GeneID:3798849;Name=SDY_2093;Note=SDY2093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2093
NC_007606.1	RefSeq	CDS	1901073	1901468	.	-	0	ID=cds1821;Parent=gene2049;Dbxref=Genbank:YP_403675.1,GeneID:3798849;Name=YP_403675.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403675.1;transl_table=11
NC_007606.1	RefSeq	gene	1901495	1901767	.	-	.	ID=gene2050;Dbxref=GeneID:18263072;Name=SDY_4687;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4687
NC_007606.1	RefSeq	CDS	1901495	1901767	.	-	0	ID=cds1822;Parent=gene2050;Dbxref=Genbank:YP_009000758.1,GeneID:18263072;Name=YP_009000758.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000758.1;transl_table=11
NC_007606.1	RefSeq	gene	1902061	1902315	.	+	.	ID=gene2051;Dbxref=GeneID:3798851;Name=bssS;Note=SDY2095;gbkey=Gene;gene=bssS;gene_biotype=protein_coding;gene_synonym=yceP;locus_tag=SDY_2095
NC_007606.1	RefSeq	CDS	1902061	1902315	.	+	0	ID=cds1823;Parent=gene2051;Dbxref=Genbank:YP_403677.1,GeneID:3798851;Name=YP_403677.1;Note=''BssS%3B regulator of biofilm through signal secretion%3B disruption of this gene in Escherichia coli led to effects on biofilm formation%2C alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing'';gbkey=CDS;gene=bssS;product=biofilm formation regulatory protein BssS;protein_id=YP_403677.1;transl_table=11
NC_007606.1	RefSeq	gene	1902430	1903548	.	+	.	ID=gene2052;Dbxref=GeneID:3798852;Name=solA;Note=SDY2096;gbkey=Gene;gene=solA;gene_biotype=protein_coding;locus_tag=SDY_2096
NC_007606.1	RefSeq	CDS	1902430	1903548	.	+	0	ID=cds1824;Parent=gene2052;Dbxref=Genbank:YP_403678.1,GeneID:3798852;Name=YP_403678.1;Note=catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde%3B FAD-binding%3B can also catalyze the demethylation of other N-methyl amino acids;gbkey=CDS;gene=solA;product=N-methyltryptophan oxidase;protein_id=YP_403678.1;transl_table=11
NC_007606.1	RefSeq	gene	1903569	1903709	.	+	.	ID=gene2053;Dbxref=GeneID:3798853;Name=yceO;Note=SDY2097;gbkey=Gene;gene=yceO;gene_biotype=protein_coding;locus_tag=SDY_2097
NC_007606.1	RefSeq	CDS	1903569	1903709	.	+	0	ID=cds1825;Parent=gene2053;Dbxref=Genbank:YP_403679.1,GeneID:3798853;Name=YP_403679.1;gbkey=CDS;gene=yceO;product=hypothetical protein;protein_id=YP_403679.1;transl_table=11
NC_007606.1	RefSeq	region	1903899	1904664	.	-	.	ID=id358;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1903913	1904308	.	-	.	ID=gene2054;Dbxref=GeneID:3798854;Name=SDY_2098;Note=SDY2098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2098
NC_007606.1	RefSeq	CDS	1903913	1904308	.	-	0	ID=cds1826;Parent=gene2054;Dbxref=Genbank:YP_403680.1,GeneID:3798854;Name=YP_403680.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403680.1;transl_table=11
NC_007606.1	RefSeq	gene	1904335	1904607	.	-	.	ID=gene2055;Dbxref=GeneID:18263073;Name=SDY_4688;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4688
NC_007606.1	RefSeq	CDS	1904335	1904607	.	-	0	ID=cds1827;Parent=gene2055;Dbxref=Genbank:YP_009000759.1,GeneID:18263073;Name=YP_009000759.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000759.1;transl_table=11
NC_007606.1	RefSeq	gene	1904733	1905392	.	-	.	ID=gene2056;Dbxref=GeneID:3798855;Name=yeiL;Note=SDY2099;gbkey=Gene;gene=yeiL;gene_biotype=protein_coding;locus_tag=SDY_2099
NC_007606.1	RefSeq	CDS	1904733	1905392	.	-	0	ID=cds1828;Parent=gene2056;Dbxref=Genbank:YP_403681.1,GeneID:3798855;Name=YP_403681.1;Note=activator of nucleoside metabolism;gbkey=CDS;gene=yeiL;product=DNA-binding transcriptional activator YeiL;protein_id=YP_403681.1;transl_table=11
NC_007606.1	RefSeq	region	1905402	1906167	.	-	.	ID=id359;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1905416	1905811	.	-	.	ID=gene2057;Dbxref=GeneID:3798856;Name=SDY_2100;Note=SDY2100;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2100
NC_007606.1	RefSeq	CDS	1905416	1905811	.	-	0	ID=cds1829;Parent=gene2057;Dbxref=Genbank:YP_403682.2,GeneID:3798856;Name=YP_403682.2;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403682.2;transl_table=11
NC_007606.1	RefSeq	gene	1905838	1906110	.	-	.	ID=gene2058;Dbxref=GeneID:18263074;Name=SDY_4689;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4689
NC_007606.1	RefSeq	CDS	1905838	1906110	.	-	0	ID=cds1830;Parent=gene2058;Dbxref=Genbank:YP_009000760.1,GeneID:18263074;Name=YP_009000760.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000760.1;transl_table=11
NC_007606.1	RefSeq	region	1906483	1907250	.	-	.	ID=id360;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1906920	1907195	.	-	.	ID=gene2059;Dbxref=GeneID:3798859;Name=insA;Note=SDY2103;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2103
NC_007606.1	RefSeq	CDS	1906920	1907195	.	-	0	ID=cds1831;Parent=gene2059;Dbxref=Genbank:YP_403685.1,GeneID:3798859;Name=YP_403685.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_403685.1;transl_table=11
NC_007606.1	RefSeq	gene	1907237	1908052	.	+	.	ID=gene2060;Dbxref=GeneID:3798860;Name=yeiK;Note=SDY2104;gbkey=Gene;gene=yeiK;gene_biotype=protein_coding;locus_tag=SDY_2104
NC_007606.1	RefSeq	CDS	1907237	1908052	.	+	0	ID=cds1832;Parent=gene2060;Dbxref=Genbank:YP_403686.1,GeneID:3798860;Name=YP_403686.1;Note=Code: F%3B COG: COG1957;gbkey=CDS;gene=yeiK;product=hypothetical protein;protein_id=YP_403686.1;transl_table=11
NC_007606.1	RefSeq	gene	1908152	1909402	.	+	.	ID=gene2061;Dbxref=GeneID:3798861;Name=yeiJ;Note=SDY2105;gbkey=Gene;gene=yeiJ;gene_biotype=protein_coding;locus_tag=SDY_2105
NC_007606.1	RefSeq	CDS	1908152	1909402	.	+	0	ID=cds1833;Parent=gene2061;Dbxref=Genbank:YP_403687.1,GeneID:3798861;Name=YP_403687.1;Note=Code: F%3B COG: COG1972;gbkey=CDS;gene=yeiJ;product=transport system permease;protein_id=YP_403687.1;transl_table=11
NC_007606.1	RefSeq	gene	1909458	1910546	.	-	.	ID=gene2062;Dbxref=GeneID:3798862;Name=yeiI;Note=SDY2106;gbkey=Gene;gene=yeiI;gene_biotype=protein_coding;locus_tag=SDY_2106
NC_007606.1	RefSeq	CDS	1909458	1910546	.	-	0	ID=cds1834;Parent=gene2062;Dbxref=Genbank:YP_403688.1,GeneID:3798862;Name=YP_403688.1;Note=Code: G%3B COG: COG0524;gbkey=CDS;gene=yeiI;product=hypothetical protein;protein_id=YP_403688.1;transl_table=11
NC_007606.1	RefSeq	gene	1910549	1911406	.	-	.	ID=gene2063;Dbxref=GeneID:3798863;Name=nfo;Note=SDY2107;gbkey=Gene;gene=nfo;gene_biotype=protein_coding;locus_tag=SDY_2107
NC_007606.1	RefSeq	CDS	1910549	1911406	.	-	0	ID=cds1835;Parent=gene2063;Dbxref=Genbank:YP_403689.1,GeneID:3798863;Name=YP_403689.1;Note=Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues;gbkey=CDS;gene=nfo;product=endonuclease IV;protein_id=YP_403689.1;transl_table=11
NC_007606.1	RefSeq	gene	1911480	1912529	.	-	.	ID=gene2064;Dbxref=GeneID:3798864;Name=yeiH;Note=SDY2108;gbkey=Gene;gene=yeiH;gene_biotype=protein_coding;locus_tag=SDY_2108
NC_007606.1	RefSeq	CDS	1911480	1912529	.	-	0	ID=cds1836;Parent=gene2064;Dbxref=Genbank:YP_403690.1,GeneID:3798864;Name=YP_403690.1;Note=Code: S%3B COG: COG2855;gbkey=CDS;gene=yeiH;product=hypothetical protein;protein_id=YP_403690.1;transl_table=11
NC_007606.1	RefSeq	gene	1912628	1913509	.	+	.	ID=gene2065;Dbxref=GeneID:3798865;Name=yeiE;Note=SDY2109;gbkey=Gene;gene=yeiE;gene_biotype=protein_coding;locus_tag=SDY_2109
NC_007606.1	RefSeq	CDS	1912628	1913509	.	+	0	ID=cds1837;Parent=gene2065;Dbxref=Genbank:YP_403691.1,GeneID:3798865;Name=YP_403691.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=yeiE;product=DNA-binding transcriptional regulator;protein_id=YP_403691.1;transl_table=11
NC_007606.1	RefSeq	gene	1913714	1915183	.	+	.	ID=gene2066;Dbxref=GeneID:3798866;Name=lysP;Note=SDY2110;gbkey=Gene;gene=lysP;gene_biotype=protein_coding;locus_tag=SDY_2110
NC_007606.1	RefSeq	CDS	1913714	1915183	.	+	0	ID=cds1838;Parent=gene2066;Dbxref=Genbank:YP_403692.1,GeneID:3798866;Name=YP_403692.1;Note=Code: E%3B COG: COG0833;gbkey=CDS;gene=lysP;product=lysine transporter;protein_id=YP_403692.1;transl_table=11
NC_007606.1	RefSeq	gene	1915476	1917456	.	+	.	ID=gene2067;Dbxref=GeneID:3798867;Name=cirA;Note=SDY2111%3B frameshift%3B original product: outer membrane receptor for iron-regulated colicin I receptor%3B porin%3B requires tonB gene product;gbkey=Gene;gene=cirA;gene_biotype=pseudogene;locus_tag=SDY_2111;pseudo=true
NC_007606.1	RefSeq	gene	1917488	1918324	.	-	.	ID=gene2068;Dbxref=GeneID:3798868;Name=yeiG;Note=SDY2112;gbkey=Gene;gene=yeiG;gene_biotype=protein_coding;locus_tag=SDY_2112
NC_007606.1	RefSeq	CDS	1917488	1918324	.	-	0	ID=cds1839;Parent=gene2068;Dbxref=Genbank:YP_403693.1,GeneID:3798868;Name=YP_403693.1;Note=Code: R%3B COG: COG0627;gbkey=CDS;gene=yeiG;product=esterase;protein_id=YP_403693.1;transl_table=11
NC_007606.1	RefSeq	gene	1918252	1918536	.	-	.	ID=gene2069;Dbxref=GeneID:3798869;Name=SDY_2113;Note=SDY2113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2113
NC_007606.1	RefSeq	CDS	1918252	1918536	.	-	0	ID=cds1840;Parent=gene2069;Dbxref=Genbank:YP_403694.1,GeneID:3798869;Name=YP_403694.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403694.1;transl_table=11
NC_007606.1	RefSeq	region	1918375	1919149	.	+	.	ID=id361;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1918432	1918704	.	+	.	ID=gene2070;Dbxref=GeneID:18263075;Name=SDY_4690;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4690
NC_007606.1	RefSeq	CDS	1918432	1918704	.	+	0	ID=cds1841;Parent=gene2070;Dbxref=Genbank:YP_009000761.1,GeneID:18263075;Name=YP_009000761.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000761.1;transl_table=11
NC_007606.1	RefSeq	gene	1919220	1919627	.	-	.	ID=gene2071;Dbxref=GeneID:3798871;Name=SDY_2115;Note=SDY2115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2115
NC_007606.1	RefSeq	CDS	1919220	1919627	.	-	0	ID=cds1842;Parent=gene2071;Dbxref=Genbank:YP_403696.1,GeneID:3798871;Name=YP_403696.1;gbkey=CDS;product=bacteriophage protein;protein_id=YP_403696.1;transl_table=11
NC_007606.1	RefSeq	gene	1919856	1920797	.	-	.	ID=gene2072;Dbxref=GeneID:3798872;Name=SDY_2116;Note=SDY2116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2116
NC_007606.1	RefSeq	CDS	1919856	1920797	.	-	0	ID=cds1843;Parent=gene2072;Dbxref=Genbank:YP_403697.1,GeneID:3798872;Name=YP_403697.1;gbkey=CDS;product=bacteriophage protein;protein_id=YP_403697.1;transl_table=11
NC_007606.1	RefSeq	gene	1920809	1921315	.	-	.	ID=gene2073;Dbxref=GeneID:3798873;Name=SDY_2117;Note=SDY2117;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2117;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1921319	1922191	.	-	.	ID=gene2074;Dbxref=GeneID:3798875;Name=SDY_2119;Note=SDY2119;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2119
NC_007606.1	RefSeq	CDS	1921319	1922191	.	-	0	ID=cds1844;Parent=gene2074;Dbxref=Genbank:YP_403700.1,GeneID:3798875;Name=YP_403700.1;gbkey=CDS;product=bacteriophage protein;protein_id=YP_403700.1;transl_table=11
NC_007606.1	RefSeq	gene	1922269	1922532	.	-	.	ID=gene2075;Dbxref=GeneID:3798876;Name=SDY_2120;Note=SDY2120;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2120
NC_007606.1	RefSeq	CDS	1922269	1922532	.	-	0	ID=cds1845;Parent=gene2075;Dbxref=Genbank:YP_403701.1,GeneID:3798876;Name=YP_403701.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403701.1;transl_table=11
NC_007606.1	RefSeq	gene	1923170	1924252	.	-	.	ID=gene2076;Dbxref=GeneID:3798877;Name=SDY_2121;Note=SDY2121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2121
NC_007606.1	RefSeq	CDS	1923170	1924252	.	-	0	ID=cds1846;Parent=gene2076;Dbxref=Genbank:YP_403702.1,GeneID:3798877;Name=YP_403702.1;gbkey=CDS;product=bacteriophage protein;protein_id=YP_403702.1;transl_table=11
NC_007606.1	RefSeq	region	1924330	1925097	.	-	.	ID=id362;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1924345	1924722	.	-	.	ID=gene2077;Dbxref=GeneID:3798878;Name=insB;Note=SDY2122;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2122
NC_007606.1	RefSeq	CDS	1924345	1924722	.	-	0	ID=cds1847;Parent=gene2077;Dbxref=Genbank:YP_403703.1,GeneID:3798878;Name=YP_403703.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403703.1;transl_table=11
NC_007606.1	RefSeq	gene	1925132	1926613	.	+	.	ID=gene2078;Dbxref=GeneID:3798879;Name=SDY_2123;Note=SDY2123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2123
NC_007606.1	RefSeq	CDS	1925132	1926613	.	+	0	ID=cds1848;Parent=gene2078;Dbxref=Genbank:YP_403704.1,GeneID:3798879;Name=YP_403704.1;Note=Code: P%3B COG: COG3119;gbkey=CDS;product=sulfatase;protein_id=YP_403704.1;transl_table=11
NC_007606.1	RefSeq	region	1927081	1927687	.	+	.	ID=id363;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1927144	1927416	.	+	.	ID=gene2079;Dbxref=GeneID:18263076;Name=SDY_4691;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4691
NC_007606.1	RefSeq	CDS	1927144	1927416	.	+	0	ID=cds1849;Parent=gene2079;Dbxref=Genbank:YP_009000762.1,GeneID:18263076;Name=YP_009000762.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000762.1;transl_table=11
NC_007606.1	RefSeq	region	1927687	1928454	.	-	.	ID=id364;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1927702	1928079	.	-	.	ID=gene2080;Dbxref=GeneID:3796520;Name=insB;Note=SDY2125;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2125
NC_007606.1	RefSeq	CDS	1927702	1928079	.	-	0	ID=cds1850;Parent=gene2080;Dbxref=Genbank:YP_403706.1,GeneID:3796520;Name=YP_403706.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403706.1;transl_table=11
NC_007606.1	RefSeq	region	1928455	1928628	.	+	.	ID=id365;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1928844	1929512	.	+	.	ID=gene2081;Dbxref=GeneID:3796522;Name=folE;Note=SDY2127;gbkey=Gene;gene=folE;gene_biotype=protein_coding;locus_tag=SDY_2127
NC_007606.1	RefSeq	CDS	1928844	1929512	.	+	0	ID=cds1851;Parent=gene2081;Dbxref=Genbank:YP_403708.1,GeneID:3796522;Name=YP_403708.1;Note=''involved in the first step of tetrahydrofolate biosynthesis%3B catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1%2C2%2C3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water%3B forms a homopolymer'';gbkey=CDS;gene=folE;product=GTP cyclohydrolase I;protein_id=YP_403708.1;transl_table=11
NC_007606.1	RefSeq	gene	1929529	1930685	.	+	.	ID=gene2082;Dbxref=GeneID:3796523;Name=yeiB;Note=SDY2128;gbkey=Gene;gene=yeiB;gene_biotype=pseudogene;locus_tag=SDY_2128;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1930827	1931867	.	+	.	ID=gene2083;Dbxref=GeneID:3796524;Name=galS;Note=SDY2129;gbkey=Gene;gene=galS;gene_biotype=protein_coding;locus_tag=SDY_2129
NC_007606.1	RefSeq	CDS	1930827	1931867	.	+	0	ID=cds1852;Parent=gene2083;Dbxref=Genbank:YP_403710.1,GeneID:3796524;Name=YP_403710.1;Note=negative regulator of the mglBAC operon for galactose utilization;gbkey=CDS;gene=galS;product=DNA-binding transcriptional regulator GalS;protein_id=YP_403710.1;transl_table=11
NC_007606.1	RefSeq	gene	1932147	1933145	.	+	.	ID=gene2084;Dbxref=GeneID:3796525;Name=mglB;Note=SDY2130;gbkey=Gene;gene=mglB;gene_biotype=protein_coding;locus_tag=SDY_2130
NC_007606.1	RefSeq	CDS	1932147	1933145	.	+	0	ID=cds1853;Parent=gene2084;Dbxref=Genbank:YP_403711.1,GeneID:3796525;Name=YP_403711.1;Note=Code: G%3B COG: COG1879;gbkey=CDS;gene=mglB;product=galactose-binding transport protein;protein_id=YP_403711.1;transl_table=11
NC_007606.1	RefSeq	region	1933417	1934165	.	+	.	ID=id366;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1933756	1934151	.	+	.	ID=gene2085;Dbxref=GeneID:3796527;Name=SDY_2132;Note=SDY2132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2132
NC_007606.1	RefSeq	CDS	1933756	1934151	.	+	0	ID=cds1854;Parent=gene2085;Dbxref=Genbank:YP_403713.1,GeneID:3796527;Name=YP_403713.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403713.1;transl_table=11
NC_007606.1	RefSeq	gene	1934129	1936057	.	+	.	ID=gene2086;Dbxref=GeneID:3796528;Name=mglA;Note=SDY2133%3B contains IS1 insertion%3B original product: ATP-binding component of methyl-galactoside transport and galactose taxis;gbkey=Gene;gene=mglA;gene_biotype=pseudogene;locus_tag=SDY_2133;pseudo=true
NC_007606.1	RefSeq	region	1935027	1935794	.	+	.	ID=id367;Dbxref=GeneID:3796528;gbkey=mobile_element;gene=mglA
NC_007606.1	RefSeq	gene	1935402	1935779	.	+	.	ID=gene2087;Dbxref=GeneID:3796529;Name=insB;Note=SDY2134;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2134
NC_007606.1	RefSeq	CDS	1935402	1935779	.	+	0	ID=cds1855;Parent=gene2087;Dbxref=Genbank:YP_403714.1,GeneID:3796529;Name=YP_403714.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403714.1;transl_table=11
NC_007606.1	RefSeq	region	1936138	1936905	.	-	.	ID=id368;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1936153	1936530	.	-	.	ID=gene2088;Dbxref=GeneID:3796530;Name=insB;Note=SDY2135;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2135
NC_007606.1	RefSeq	CDS	1936153	1936530	.	-	0	ID=cds1856;Parent=gene2088;Dbxref=Genbank:YP_403715.1,GeneID:3796530;Name=YP_403715.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403715.1;transl_table=11
NC_007606.1	RefSeq	gene	1936575	1936850	.	-	.	ID=gene2089;Dbxref=GeneID:3796531;Name=insA;Note=SDY2136;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2136
NC_007606.1	RefSeq	CDS	1936575	1936850	.	-	0	ID=cds1857;Parent=gene2089;Dbxref=Genbank:YP_403716.1,GeneID:3796531;Name=YP_403716.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403716.1;transl_table=11
NC_007606.1	RefSeq	gene	1936984	1937877	.	+	.	ID=gene2090;Dbxref=GeneID:3796532;Name=mglC;Note=SDY2137;gbkey=Gene;gene=mglC;gene_biotype=protein_coding;locus_tag=SDY_2137
NC_007606.1	RefSeq	CDS	1936984	1937877	.	+	0	ID=cds1858;Parent=gene2090;Dbxref=Genbank:YP_403717.1,GeneID:3796532;Name=YP_403717.1;Note=ABC transporter%3B functions in galactose transport%3B part of MglA2C2B transporter complex;gbkey=CDS;gene=mglC;product=beta-methylgalactoside transporter inner membrane protein;protein_id=YP_403717.1;transl_table=11
NC_007606.1	RefSeq	region	1938131	1938896	.	-	.	ID=id369;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1938145	1938540	.	-	.	ID=gene2091;Dbxref=GeneID:3796533;Name=SDY_2138;Note=SDY2138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2138
NC_007606.1	RefSeq	CDS	1938145	1938540	.	-	0	ID=cds1859;Parent=gene2091;Dbxref=Genbank:YP_403718.1,GeneID:3796533;Name=YP_403718.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403718.1;transl_table=11
NC_007606.1	RefSeq	gene	1938567	1938839	.	-	.	ID=gene2092;Dbxref=GeneID:18263077;Name=SDY_4692;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4692
NC_007606.1	RefSeq	CDS	1938567	1938839	.	-	0	ID=cds1860;Parent=gene2092;Dbxref=Genbank:YP_009000763.1,GeneID:18263077;Name=YP_009000763.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000763.1;transl_table=11
NC_007606.1	RefSeq	gene	1938875	1939957	.	-	.	ID=gene2093;Dbxref=GeneID:18263078;Name=SDY_2140a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2140a
NC_007606.1	RefSeq	CDS	1938875	1939957	.	-	0	ID=cds1861;Parent=gene2093;Dbxref=Genbank:YP_009000764.1,GeneID:18263078;Name=YP_009000764.1;gbkey=CDS;product=dihydropyrimidine dehydrogenase;protein_id=YP_009000764.1;transl_table=11
NC_007606.1	RefSeq	gene	1939951	1941189	.	-	.	ID=gene2094;Dbxref=GeneID:3796535;Name=SDY_2140;Note=SDY2140;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2140;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1941207	1941972	.	+	.	ID=id370;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1941264	1941536	.	+	.	ID=gene2095;Dbxref=GeneID:18263079;Name=SDY_4693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4693
NC_007606.1	RefSeq	CDS	1941264	1941536	.	+	0	ID=cds1862;Parent=gene2095;Dbxref=Genbank:YP_009000765.1,GeneID:18263079;Name=YP_009000765.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000765.1;transl_table=11
NC_007606.1	RefSeq	gene	1941563	1941958	.	+	.	ID=gene2096;Dbxref=GeneID:3796536;Name=SDY_2141;Note=SDY2141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2141
NC_007606.1	RefSeq	CDS	1941563	1941958	.	+	0	ID=cds1863;Parent=gene2096;Dbxref=Genbank:YP_403720.1,GeneID:3796536;Name=YP_403720.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403720.1;transl_table=11
NC_007606.1	RefSeq	gene	1942157	1942396	.	-	.	ID=gene2097;Dbxref=GeneID:3796537;Name=SDY_2142;Note=SDY2142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2142
NC_007606.1	RefSeq	CDS	1942157	1942396	.	-	0	ID=cds1864;Parent=gene2097;Dbxref=Genbank:YP_403721.1,GeneID:3796537;Name=YP_403721.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403721.1;transl_table=11
NC_007606.1	RefSeq	gene	1942399	1943118	.	-	.	ID=gene2098;Dbxref=GeneID:3796538;Name=sanA;Note=SDY2143;gbkey=Gene;gene=sanA;gene_biotype=protein_coding;locus_tag=SDY_2143
NC_007606.1	RefSeq	CDS	1942399	1943118	.	-	0	ID=cds1865;Parent=gene2098;Dbxref=Genbank:YP_403722.1,GeneID:3796538;Name=YP_403722.1;Note=Code: S%3B COG: COG2949;gbkey=CDS;gene=sanA;product=hypothetical protein;protein_id=YP_403722.1;transl_table=11
NC_007606.1	RefSeq	gene	1943268	1944152	.	-	.	ID=gene2099;Dbxref=GeneID:3798920;Name=cdd;Note=SDY2144;gbkey=Gene;gene=cdd;gene_biotype=protein_coding;locus_tag=SDY_2144
NC_007606.1	RefSeq	CDS	1943268	1944152	.	-	0	ID=cds1866;Parent=gene2099;Dbxref=Genbank:YP_403723.1,GeneID:3798920;Name=YP_403723.1;Note=Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis;gbkey=CDS;gene=cdd;product=cytidine deaminase;protein_id=YP_403723.1;transl_table=11
NC_007606.1	RefSeq	gene	1944282	1944977	.	-	.	ID=gene2100;Dbxref=GeneID:3798921;Name=yohK;Note=SDY2145;gbkey=Gene;gene=yohK;gene_biotype=protein_coding;locus_tag=SDY_2145
NC_007606.1	RefSeq	CDS	1944282	1944977	.	-	0	ID=cds1867;Parent=gene2100;Dbxref=Genbank:YP_403724.1,GeneID:3798921;Name=YP_403724.1;Note=Code: M%3B COG: COG1346;gbkey=CDS;gene=yohK;product=hypothetical protein;protein_id=YP_403724.1;transl_table=11
NC_007606.1	RefSeq	gene	1944974	1945372	.	-	.	ID=gene2101;Dbxref=GeneID:3798922;Name=yohJ;Note=SDY2146;gbkey=Gene;gene=yohJ;gene_biotype=protein_coding;locus_tag=SDY_2146
NC_007606.1	RefSeq	CDS	1944974	1945372	.	-	0	ID=cds1868;Parent=gene2101;Dbxref=Genbank:YP_403725.1,GeneID:3798922;Name=YP_403725.1;Note=Code: R%3B COG: COG1380;gbkey=CDS;gene=yohJ;product=hypothetical protein;protein_id=YP_403725.1;transl_table=11
NC_007606.1	RefSeq	gene	1945632	1946393	.	+	.	ID=gene2102;Dbxref=GeneID:3798923;Name=yohI;Note=SDY2147;gbkey=Gene;gene=yohI;gene_biotype=pseudogene;locus_tag=SDY_2147;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1946865	1947630	.	-	.	ID=id371;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1946879	1947274	.	-	.	ID=gene2103;Dbxref=GeneID:3798924;Name=SDY_2148;Note=SDY2148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2148
NC_007606.1	RefSeq	CDS	1946879	1947274	.	-	0	ID=cds1869;Parent=gene2103;Dbxref=Genbank:YP_403727.1,GeneID:3798924;Name=YP_403727.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403727.1;transl_table=11
NC_007606.1	RefSeq	gene	1947301	1947573	.	-	.	ID=gene2104;Dbxref=GeneID:18263080;Name=SDY_4694;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4694
NC_007606.1	RefSeq	CDS	1947301	1947573	.	-	0	ID=cds1870;Parent=gene2104;Dbxref=Genbank:YP_009000766.1,GeneID:18263080;Name=YP_009000766.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000766.1;transl_table=11
NC_007606.1	RefSeq	gene	1947863	1949298	.	+	.	ID=gene2105;Dbxref=GeneID:3798925;Name=yohH;Note=SDY2149;gbkey=Gene;gene=yohH;gene_biotype=pseudogene;locus_tag=SDY_2149;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1949351	1950112	.	+	.	ID=gene2106;Dbxref=GeneID:3798927;Name=yohF;Note=SDY2151;gbkey=Gene;gene=yohF;gene_biotype=protein_coding;locus_tag=SDY_2151
NC_007606.1	RefSeq	CDS	1949351	1950112	.	+	0	ID=cds1871;Parent=gene2106;Dbxref=Genbank:YP_403730.1,GeneID:3798927;Name=YP_403730.1;Note=Code: IQR%3B COG: COG1028;gbkey=CDS;gene=yohF;product=acetoin dehydrogenase;protein_id=YP_403730.1;transl_table=11
NC_007606.1	RefSeq	gene	1950242	1950856	.	-	.	ID=gene2107;Dbxref=GeneID:3798928;Name=yohD;Note=SDY2152;gbkey=Gene;gene=yohD;gene_biotype=protein_coding;locus_tag=SDY_2152
NC_007606.1	RefSeq	CDS	1950242	1950856	.	-	0	ID=cds1872;Parent=gene2107;Dbxref=Genbank:YP_403731.1,GeneID:3798928;Name=YP_403731.1;Note=Code: S%3B COG: COG0586;gbkey=CDS;gene=yohD;product=hypothetical protein;protein_id=YP_403731.1;transl_table=11
NC_007606.1	RefSeq	gene	1950966	1951577	.	+	.	ID=gene2108;Dbxref=GeneID:3798929;Name=yohC;Note=SDY2153;gbkey=Gene;gene=yohC;gene_biotype=protein_coding;locus_tag=SDY_2153
NC_007606.1	RefSeq	CDS	1950966	1951577	.	+	0	ID=cds1873;Parent=gene2108;Dbxref=Genbank:YP_403732.1,GeneID:3798929;Name=YP_403732.1;gbkey=CDS;gene=yohC;product=hypothetical protein;protein_id=YP_403732.1;transl_table=11
NC_007606.1	RefSeq	gene	1951742	1952683	.	+	.	ID=gene2109;Dbxref=GeneID:3798930;Name=pbpG;Note=SDY2154;gbkey=Gene;gene=pbpG;gene_biotype=protein_coding;locus_tag=SDY_2154
NC_007606.1	RefSeq	CDS	1951742	1952683	.	+	0	ID=cds1874;Parent=gene2109;Dbxref=Genbank:YP_403733.1,GeneID:3798930;Name=YP_403733.1;Note=specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi%3B Penicillin-binding protein 7;gbkey=CDS;gene=pbpG;product=D-alanyl-D-alanine endopeptidase;protein_id=YP_403733.1;transl_table=11
NC_007606.1	RefSeq	gene	1952722	1954437	.	-	.	ID=gene2110;Dbxref=GeneID:3798931;Name=dld;Note=SDY2155;gbkey=Gene;gene=dld;gene_biotype=protein_coding;locus_tag=SDY_2155
NC_007606.1	RefSeq	CDS	1952722	1954437	.	-	0	ID=cds1875;Parent=gene2110;Dbxref=Genbank:YP_403734.1,GeneID:3798931;Name=YP_403734.1;Note=''component of the membrane-bound D-lactate oxidase%2C FAD-binding%2C NADH independent'';gbkey=CDS;gene=dld;product=D-lactate dehydrogenase;protein_id=YP_403734.1;transl_table=11
NC_007606.1	RefSeq	gene	1954633	1956930	.	+	.	ID=gene2111;Dbxref=GeneID:3798932;Name=bglX;Note=SDY2156;gbkey=Gene;gene=bglX;gene_biotype=protein_coding;locus_tag=SDY_2156
NC_007606.1	RefSeq	CDS	1954633	1956930	.	+	0	ID=cds1876;Parent=gene2111;Dbxref=Genbank:YP_403735.1,GeneID:3798932;Name=YP_403735.1;Note=Code: G%3B COG: COG1472;gbkey=CDS;gene=bglX;product=beta-D-glucoside glucohydrolase;protein_id=YP_403735.1;transl_table=11
NC_007606.1	RefSeq	gene	1957182	1958099	.	+	.	ID=gene2112;Dbxref=GeneID:3798933;Name=yehZ;Note=SDY2157;gbkey=Gene;gene=yehZ;gene_biotype=protein_coding;locus_tag=SDY_2157
NC_007606.1	RefSeq	CDS	1957182	1958099	.	+	0	ID=cds1877;Parent=gene2112;Dbxref=Genbank:YP_403736.1,GeneID:3798933;Name=YP_403736.1;Note=Code: M%3B COG: COG1732;gbkey=CDS;gene=yehZ;product=transport system permease;protein_id=YP_403736.1;transl_table=11
NC_007606.1	RefSeq	gene	1958106	1959263	.	+	.	ID=gene2113;Dbxref=GeneID:3798934;Name=yehY;Note=SDY2158%3B contains in-frame stop codon%3B original product:  transport system permease;gbkey=Gene;gene=yehY;gene_biotype=pseudogene;locus_tag=SDY_2158;pseudo=true
NC_007606.1	RefSeq	gene	1959256	1960178	.	+	.	ID=gene2114;Dbxref=GeneID:3798935;Name=yehX;Note=SDY2159%3B frameshift%3B original product:  ATP-binding component of a transport system;gbkey=Gene;gene=yehX;gene_biotype=pseudogene;locus_tag=SDY_2159;pseudo=true
NC_007606.1	RefSeq	gene	1960183	1960914	.	+	.	ID=gene2115;Dbxref=GeneID:3798936;Name=yehW;Note=SDY2160;gbkey=Gene;gene=yehW;gene_biotype=protein_coding;locus_tag=SDY_2160
NC_007606.1	RefSeq	CDS	1960183	1960914	.	+	0	ID=cds1878;Parent=gene2115;Dbxref=Genbank:YP_403737.1,GeneID:3798936;Name=YP_403737.1;Note=Code: E%3B COG: COG1174;gbkey=CDS;gene=yehW;product=transport system permease;protein_id=YP_403737.1;transl_table=11
NC_007606.1	RefSeq	gene	1960895	1961002	.	-	.	ID=gene2116;Dbxref=GeneID:3798937;Name=SDY_2161;Note=SDY2161;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2161
NC_007606.1	RefSeq	CDS	1960895	1961002	.	-	0	ID=cds1879;Parent=gene2116;Dbxref=Genbank:YP_403738.1,GeneID:3798937;Name=YP_403738.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403738.1;transl_table=11
NC_007606.1	RefSeq	gene	1961062	1961793	.	-	.	ID=gene2117;Dbxref=GeneID:3798938;Name=yehV;Note=SDY2162;gbkey=Gene;gene=yehV;gene_biotype=protein_coding;locus_tag=SDY_2162
NC_007606.1	RefSeq	CDS	1961062	1961793	.	-	0	ID=cds1880;Parent=gene2117;Dbxref=Genbank:YP_403739.1,GeneID:3798938;Name=YP_403739.1;Note=Code: K%3B COG: COG0789;gbkey=CDS;gene=yehV;product=transcriptional regulator;protein_id=YP_403739.1;transl_table=11
NC_007606.1	RefSeq	gene	1962015	1963700	.	+	.	ID=gene2118;Dbxref=GeneID:3798939;Name=yehU;Note=SDY2163;gbkey=Gene;gene=yehU;gene_biotype=protein_coding;locus_tag=SDY_2163
NC_007606.1	RefSeq	CDS	1962015	1963700	.	+	0	ID=cds1881;Parent=gene2118;Dbxref=Genbank:YP_403740.1,GeneID:3798939;Name=YP_403740.1;Note=Code: T%3B COG: COG3275;gbkey=CDS;gene=yehU;product=2-component sensor protein;protein_id=YP_403740.1;transl_table=11
NC_007606.1	RefSeq	gene	1963682	1964416	.	+	.	ID=gene2119;Dbxref=GeneID:3799228;Name=yehT;Note=SDY2164;gbkey=Gene;gene=yehT;gene_biotype=protein_coding;locus_tag=SDY_2164
NC_007606.1	RefSeq	CDS	1963682	1964416	.	+	0	ID=cds1882;Parent=gene2119;Dbxref=Genbank:YP_403741.1,GeneID:3799228;Name=YP_403741.1;Note=unknown function%3B when overproduced it confers drug-resistance;gbkey=CDS;gene=yehT;product=two-component response-regulator YehT;protein_id=YP_403741.1;transl_table=11
NC_007606.1	RefSeq	gene	1964463	1964933	.	+	.	ID=gene2120;Dbxref=GeneID:3799229;Name=yehS;Note=SDY2165;gbkey=Gene;gene=yehS;gene_biotype=protein_coding;locus_tag=SDY_2165
NC_007606.1	RefSeq	CDS	1964463	1964933	.	+	0	ID=cds1883;Parent=gene2120;Dbxref=Genbank:YP_403742.1,GeneID:3799229;Name=YP_403742.1;Note=Code: S%3B COG: COG4807;gbkey=CDS;gene=yehS;product=hypothetical protein;protein_id=YP_403742.1;transl_table=11
NC_007606.1	RefSeq	gene	1964975	1965448	.	-	.	ID=gene2121;Dbxref=GeneID:3799230;Name=yehR;Note=SDY2166;gbkey=Gene;gene=yehR;gene_biotype=protein_coding;locus_tag=SDY_2166
NC_007606.1	RefSeq	CDS	1964975	1965448	.	-	0	ID=cds1884;Parent=gene2121;Dbxref=Genbank:YP_403743.1,GeneID:3799230;Name=YP_403743.1;Note=Code: S%3B COG: COG4808;gbkey=CDS;gene=yehR;product=hypothetical protein;protein_id=YP_403743.1;transl_table=11
NC_007606.1	RefSeq	gene	1965561	1966532	.	-	.	ID=gene2122;Dbxref=GeneID:3799231;Name=SDY_2167;Note=SDY2167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2167
NC_007606.1	RefSeq	CDS	1965561	1966532	.	-	0	ID=cds1885;Parent=gene2122;Dbxref=Genbank:YP_403744.1,GeneID:3799231;Name=YP_403744.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403744.1;transl_table=11
NC_007606.1	RefSeq	region	1966549	1967879	.	-	.	ID=id372;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1966560	1967465	.	-	.	ID=gene2123;Dbxref=GeneID:3799232;Name=SDY_2168;Note=SDY2168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2168
NC_007606.1	RefSeq	CDS	1966560	1967465	.	-	0	ID=cds1886;Parent=gene2123;Dbxref=Genbank:YP_403745.2,GeneID:3799232;Name=YP_403745.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_403745.2;transl_table=11
NC_007606.1	RefSeq	gene	1967423	1967788	.	-	.	ID=gene2124;Dbxref=GeneID:3799233;Name=SDY_2169;Note=SDY2169;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2169
NC_007606.1	RefSeq	CDS	1967423	1967788	.	-	0	ID=cds1887;Parent=gene2124;Dbxref=Genbank:YP_403746.1,GeneID:3799233;Name=YP_403746.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_403746.1;transl_table=11
NC_007606.1	RefSeq	gene	1967830	1968921	.	-	.	ID=gene2125;Dbxref=GeneID:3799234;Name=SDY_2170;Note=SDY2170;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2170
NC_007606.1	RefSeq	CDS	1967830	1968921	.	-	0	ID=cds1888;Parent=gene2125;Dbxref=Genbank:YP_403747.1,GeneID:3799234;Name=YP_403747.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=hypothetical protein;protein_id=YP_403747.1;transl_table=11
NC_007606.1	RefSeq	gene	1968894	1970029	.	-	.	ID=gene2126;Dbxref=GeneID:3799235;Name=SDY_2171;Note=SDY2171;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2171;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	1970022	1972261	.	-	.	ID=gene2127;Dbxref=GeneID:3799237;Name=SDY_2173;Note=SDY2173;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2173;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1972184	1972949	.	+	.	ID=id373;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1972241	1972513	.	+	.	ID=gene2128;Dbxref=GeneID:18263081;Name=SDY_4695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4695;pseudogene=unknown
NC_007606.1	RefSeq	CDS	1972241	1972513	.	+	0	ID=cds1889;Parent=gene2128;Dbxref=Genbank:YP_009000767.1,GeneID:18263081;Name=YP_009000767.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000767.1;transl_table=11
NC_007606.1	RefSeq	gene	1972540	1972935	.	+	.	ID=gene2129;Dbxref=GeneID:3799239;Name=SDY_2175;Note=SDY2175;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2175
NC_007606.1	RefSeq	CDS	1972540	1972935	.	+	0	ID=cds1890;Parent=gene2129;Dbxref=Genbank:YP_403752.1,GeneID:3799239;Name=YP_403752.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403752.1;transl_table=11
NC_007606.1	RefSeq	gene	1972876	1974807	.	-	.	ID=gene2130;Dbxref=GeneID:3799240;Name=SDY_2176;Note=SDY2176;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2176;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	1976239	1977008	.	-	.	ID=id374;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1976253	1976651	.	-	.	ID=gene2131;Dbxref=GeneID:3799242;Name=SDY_2178;Note=SDY2178;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2178
NC_007606.1	RefSeq	CDS	1976253	1976651	.	-	0	ID=cds1891;Parent=gene2131;Dbxref=Genbank:YP_403755.1,GeneID:3799242;Name=YP_403755.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403755.1;transl_table=11
NC_007606.1	RefSeq	gene	1976678	1976950	.	-	.	ID=gene2132;Dbxref=GeneID:18263082;Name=SDY_4696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4696
NC_007606.1	RefSeq	CDS	1976678	1976950	.	-	0	ID=cds1892;Parent=gene2132;Dbxref=Genbank:YP_009000768.1,GeneID:18263082;Name=YP_009000768.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000768.1;transl_table=11
NC_007606.1	RefSeq	gene	1976986	1977411	.	-	.	ID=gene2133;Dbxref=GeneID:3799243;Name=SDY_2179;Note=SDY2179;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2179
NC_007606.1	RefSeq	CDS	1976986	1977411	.	-	0	ID=cds1893;Parent=gene2133;Dbxref=Genbank:YP_403756.1,GeneID:3799243;Name=YP_403756.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403756.1;transl_table=11
NC_007606.1	RefSeq	gene	1977371	1978459	.	-	.	ID=gene2134;Dbxref=GeneID:3799244;Name=SDY_2180;Note=SDY2180;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2180
NC_007606.1	RefSeq	CDS	1977371	1978459	.	-	0	ID=cds1894;Parent=gene2134;Dbxref=Genbank:YP_403757.1,GeneID:3799244;Name=YP_403757.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403757.1;transl_table=11
NC_007606.1	RefSeq	gene	1978813	1980846	.	-	.	ID=gene2135;Dbxref=GeneID:3799245;Name=metG;Note=SDY2181;gbkey=Gene;gene=metG;gene_biotype=protein_coding;locus_tag=SDY_2181
NC_007606.1	RefSeq	CDS	1978813	1980846	.	-	0	ID=cds1895;Parent=gene2135;Dbxref=Genbank:YP_403758.1,GeneID:3799245;Name=YP_403758.1;Note=methionine--tRNA ligase%3B MetRS%3B adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate%3B some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not%3B four subfamilies exist based on sequence motifs and zinc content;gbkey=CDS;gene=metG;product=methionyl-tRNA synthetase;protein_id=YP_403758.1;transl_table=11
NC_007606.1	RefSeq	gene	1980978	1982087	.	+	.	ID=gene2136;Dbxref=GeneID:3799246;Name=mrp;Note=SDY2182;gbkey=Gene;gene=mrp;gene_biotype=protein_coding;locus_tag=SDY_2182
NC_007606.1	RefSeq	CDS	1980978	1982087	.	+	0	ID=cds1896;Parent=gene2136;Dbxref=Genbank:YP_403759.2,GeneID:3799246;Name=YP_403759.2;Note=Code: D%3B COG: COG0489;gbkey=CDS;gene=mrp;product=ATPase;protein_id=YP_403759.2;transl_table=11
NC_007606.1	RefSeq	gene	1982350	1982613	.	+	.	ID=gene2137;Dbxref=GeneID:3799363;Name=yehE;Note=SDY2183;gbkey=Gene;gene=yehE;gene_biotype=protein_coding;locus_tag=SDY_2183
NC_007606.1	RefSeq	CDS	1982350	1982613	.	+	0	ID=cds1897;Parent=gene2137;Dbxref=Genbank:YP_403760.1,GeneID:3799363;Name=YP_403760.1;gbkey=CDS;gene=yehE;product=hypothetical protein;protein_id=YP_403760.1;transl_table=11
NC_007606.1	RefSeq	region	1982601	1983866	.	+	.	ID=id375;gbkey=mobile_element;gene=yehE
NC_007606.1	RefSeq	gene	1982665	1982967	.	+	.	ID=gene2138;Dbxref=GeneID:3799364;Name=SDY_2184;Note=SDY2184;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2184
NC_007606.1	RefSeq	CDS	1982665	1982967	.	+	0	ID=cds1898;Parent=gene2138;Dbxref=Genbank:YP_403761.1,GeneID:3799364;Name=YP_403761.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403761.1;transl_table=11
NC_007606.1	RefSeq	gene	1983108	1983923	.	+	.	ID=gene2139;Dbxref=GeneID:3799365;Name=SDY_2185;Note=SDY2185;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2185
NC_007606.1	RefSeq	CDS	1983108	1983923	.	+	0	ID=cds1899;Parent=gene2139;Dbxref=Genbank:YP_403762.1,GeneID:3799365;Name=YP_403762.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_403762.1;transl_table=11
NC_007606.1	RefSeq	gene	1983848	1984147	.	-	.	ID=gene2140;Dbxref=GeneID:18263083;Name=DY_2185a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=DY_2185a
NC_007606.1	RefSeq	CDS	1983848	1984147	.	-	0	ID=cds1900;Parent=gene2140;Dbxref=Genbank:YP_009000769.1,GeneID:18263083;Name=YP_009000769.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_009000769.1;transl_table=11
NC_007606.1	RefSeq	gene	1984338	1985060	.	-	.	ID=gene2141;Dbxref=GeneID:3799366;Name=baeR;Note=SDY2186;gbkey=Gene;gene=baeR;gene_biotype=protein_coding;locus_tag=SDY_2186
NC_007606.1	RefSeq	CDS	1984338	1985060	.	-	0	ID=cds1901;Parent=gene2141;Dbxref=Genbank:YP_403763.1,GeneID:3799366;Name=YP_403763.1;Note=''response regulator in two-component regulatory system with BaeS%3B regulator of RNA synthesis%2C flagellar biosynthesis%2C chemotaxis and transport'';gbkey=CDS;gene=baeR;product=DNA-binding transcriptional regulator BaeR;protein_id=YP_403763.1;transl_table=11
NC_007606.1	RefSeq	gene	1985057	1986460	.	-	.	ID=gene2142;Dbxref=GeneID:3799367;Name=baeS;Note=SDY2187;gbkey=Gene;gene=baeS;gene_biotype=protein_coding;locus_tag=SDY_2187
NC_007606.1	RefSeq	CDS	1985057	1986460	.	-	0	ID=cds1902;Parent=gene2142;Dbxref=Genbank:YP_403764.1,GeneID:3799367;Name=YP_403764.1;Note=Code: T%3B COG: COG0642;gbkey=CDS;gene=baeS;product=signal transduction histidine-protein kinase BaeS;protein_id=YP_403764.1;transl_table=11
NC_007606.1	RefSeq	gene	1986354	1987400	.	-	.	ID=gene2143;Dbxref=GeneID:3799368;Name=yegB;Note=SDY2188;gbkey=Gene;gene=yegB;gene_biotype=protein_coding;locus_tag=SDY_2188
NC_007606.1	RefSeq	CDS	1986354	1987400	.	-	0	ID=cds1903;Parent=gene2143;Dbxref=Genbank:YP_403765.1,GeneID:3799368;Name=YP_403765.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=yegB;product=transport protein;protein_id=YP_403765.1;transl_table=11
NC_007606.1	RefSeq	region	1987441	1988809	.	+	.	ID=id376;gbkey=mobile_element
NC_007606.1	RefSeq	gene	1987467	1988663	.	-	.	ID=gene2144;Dbxref=GeneID:3799369;Name=SDY_2189;Note=SDY2189;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2189
NC_007606.1	RefSeq	CDS	1987467	1988663	.	-	0	ID=cds1904;Parent=gene2144;Dbxref=Genbank:YP_403766.1,GeneID:3799369;Name=YP_403766.1;Note=Code: L%3B COG: COG3547;gbkey=CDS;product=insertion element IS110 transposase;protein_id=YP_403766.1;transl_table=11
NC_007606.1	RefSeq	gene	1989099	1989758	.	+	.	ID=gene2145;Dbxref=GeneID:3799370;Name=SDY_2190;Note=SDY2190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2190
NC_007606.1	RefSeq	CDS	1989099	1989758	.	+	0	ID=cds1905;Parent=gene2145;Dbxref=Genbank:YP_403767.1,GeneID:3799370;Name=YP_403767.1;Note=Code: R%3B COG: COG4245;gbkey=CDS;product=hypothetical protein;protein_id=YP_403767.1;transl_table=11
NC_007606.1	RefSeq	gene	1989755	1990516	.	+	.	ID=gene2146;Dbxref=GeneID:3799371;Name=SDY_2191;Note=SDY2191;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2191
NC_007606.1	RefSeq	CDS	1989755	1990516	.	+	0	ID=cds1906;Parent=gene2146;Dbxref=Genbank:YP_403768.1,GeneID:3799371;Name=YP_403768.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403768.1;transl_table=11
NC_007606.1	RefSeq	gene	1990513	1992453	.	+	.	ID=gene2147;Dbxref=GeneID:3799372;Name=SDY_2192;Note=SDY2192;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2192
NC_007606.1	RefSeq	CDS	1990513	1992453	.	+	0	ID=cds1907;Parent=gene2147;Dbxref=Genbank:YP_403769.1,GeneID:3799372;Name=YP_403769.1;Note=Code: R%3B COG: COG4248;gbkey=CDS;product=chaperonin;protein_id=YP_403769.1;transl_table=11
NC_007606.1	RefSeq	gene	1992465	1993817	.	-	.	ID=gene2148;Dbxref=GeneID:3799373;Name=yegD;Note=SDY2193;gbkey=Gene;gene=yegD;gene_biotype=protein_coding;locus_tag=SDY_2193
NC_007606.1	RefSeq	CDS	1992465	1993817	.	-	0	ID=cds1908;Parent=gene2148;Dbxref=Genbank:YP_403770.2,GeneID:3799373;Name=YP_403770.2;Note=Code: O%3B COG: COG0443;gbkey=CDS;gene=yegD;product=chaperone;protein_id=YP_403770.2;transl_table=11
NC_007606.1	RefSeq	gene	1993951	1994799	.	+	.	ID=gene2149;Dbxref=GeneID:3799374;Name=alkA;Note=SDY2194;gbkey=Gene;gene=alkA;gene_biotype=protein_coding;locus_tag=SDY_2194
NC_007606.1	RefSeq	CDS	1993951	1994799	.	+	0	ID=cds1909;Parent=gene2149;Dbxref=Genbank:YP_403771.1,GeneID:3799374;Name=YP_403771.1;Note=''inducible%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine%2C 3-methylguanine%2C 7-methylguanine and 7-methyladenine'';gbkey=CDS;gene=alkA;product=3-methyladenine DNA glycosylase;protein_id=YP_403771.1;transl_table=11
NC_007606.1	RefSeq	gene	1994900	1998216	.	-	.	ID=gene2150;Dbxref=GeneID:3799375;Name=yegE;Note=SDY2195%3B contains in-frame stop codon%3B original product:  sensor-type protein;gbkey=Gene;gene=yegE;gene_biotype=pseudogene;locus_tag=SDY_2195;pseudo=true
NC_007606.1	RefSeq	gene	1998534	1999175	.	+	.	ID=gene2151;Dbxref=GeneID:3799376;Name=udk;Note=SDY2196;gbkey=Gene;gene=udk;gene_biotype=protein_coding;locus_tag=SDY_2196
NC_007606.1	RefSeq	CDS	1998534	1999175	.	+	0	ID=cds1910;Parent=gene2151;Dbxref=Genbank:YP_403772.2,GeneID:3799376;Name=YP_403772.2;Note=functions in pyrimidine salvage%3B pyrimidine ribonucleoside kinase%3B phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor;gbkey=CDS;gene=udk;product=uridine kinase;protein_id=YP_403772.2;transl_table=11
NC_007606.1	RefSeq	gene	1999267	1999848	.	+	.	ID=gene2152;Dbxref=GeneID:3799377;Name=dcd;Note=SDY2197;gbkey=Gene;gene=dcd;gene_biotype=protein_coding;locus_tag=SDY_2197
NC_007606.1	RefSeq	CDS	1999267	1999848	.	+	0	ID=cds1911;Parent=gene2152;Dbxref=Genbank:YP_403773.1,GeneID:3799377;Name=YP_403773.1;Note=Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis;gbkey=CDS;gene=dcd;product=deoxycytidine triphosphate deaminase;protein_id=YP_403773.1;transl_table=11
NC_007606.1	RefSeq	gene	1999870	2001723	.	+	.	ID=gene2153;Dbxref=GeneID:3799378;Name=asmA;Note=SDY2198;gbkey=Gene;gene=asmA;gene_biotype=protein_coding;locus_tag=SDY_2198
NC_007606.1	RefSeq	CDS	1999870	2001723	.	+	0	ID=cds1912;Parent=gene2153;Dbxref=Genbank:YP_403774.1,GeneID:3799378;Name=YP_403774.1;Note=''YegA%3B inner membrane protein involved in the assembly of outer membrane proteins (OMPs)%3B asmA-null mutants show low lipopolysaccharide (LPS) levels%2C suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity%2C resulting on altered assembly of OMPs'';gbkey=CDS;gene=asmA;product=assembly protein;protein_id=YP_403774.1;transl_table=11
NC_007606.1	RefSeq	gene	2001776	2002066	.	-	.	ID=gene2154;Dbxref=GeneID:3799379;Name=SDY_2199;Note=SDY2199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2199
NC_007606.1	RefSeq	CDS	2001776	2002066	.	-	0	ID=cds1913;Parent=gene2154;Dbxref=Genbank:YP_403775.1,GeneID:3799379;Name=YP_403775.1;Note=Code: S%3B COG: COG5606;gbkey=CDS;product=hypothetical protein;protein_id=YP_403775.1;transl_table=11
NC_007606.1	RefSeq	gene	2002056	2002277	.	-	.	ID=gene2155;Dbxref=GeneID:3799380;Name=SDY_2200;Note=SDY2200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2200
NC_007606.1	RefSeq	CDS	2002056	2002277	.	-	0	ID=cds1914;Parent=gene2155;Dbxref=Genbank:YP_403776.1,GeneID:3799380;Name=YP_403776.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403776.1;transl_table=11
NC_007606.1	RefSeq	gene	2002615	2004237	.	-	.	ID=gene2156;Dbxref=GeneID:3799381;Name=yegH;Note=SDY2201;gbkey=Gene;gene=yegH;gene_biotype=protein_coding;locus_tag=SDY_2201
NC_007606.1	RefSeq	CDS	2002615	2004237	.	-	0	ID=cds1915;Parent=gene2156;Dbxref=Genbank:YP_403777.1,GeneID:3799381;Name=YP_403777.1;Note=Code: R%3B COG: COG1253;gbkey=CDS;gene=yegH;product=transport protein;protein_id=YP_403777.1;transl_table=11
NC_007606.1	RefSeq	region	2004547	2005312	.	+	.	ID=id377;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2004604	2004876	.	+	.	ID=gene2157;Dbxref=GeneID:18263084;Name=SDY_4697;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4697
NC_007606.1	RefSeq	CDS	2004604	2004876	.	+	0	ID=cds1916;Parent=gene2157;Dbxref=Genbank:YP_009000770.1,GeneID:18263084;Name=YP_009000770.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000770.1;transl_table=11
NC_007606.1	RefSeq	gene	2004903	2005298	.	+	.	ID=gene2158;Dbxref=GeneID:3799382;Name=SDY_2202;Note=SDY2202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2202
NC_007606.1	RefSeq	CDS	2004903	2005298	.	+	0	ID=cds1917;Parent=gene2158;Dbxref=Genbank:YP_403778.1,GeneID:3799382;Name=YP_403778.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403778.1;transl_table=11
NC_007606.1	RefSeq	gene	2005517	2006410	.	+	.	ID=gene2159;Dbxref=GeneID:3797481;Name=galF;Note=SDY2203;gbkey=Gene;gene=galF;gene_biotype=protein_coding;locus_tag=SDY_2203
NC_007606.1	RefSeq	CDS	2005517	2006410	.	+	0	ID=cds1918;Parent=gene2159;Dbxref=Genbank:YP_403779.1,GeneID:3797481;Name=YP_403779.1;Note=''together with GalU subunit composes the UTP--glucose-1-phosphate uridylyltransferase%2C an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate%3B regulates cellular levels of UDP-glucose'';gbkey=CDS;gene=galF;product=UTP-glucose-1-phosphate uridylyltransferase;protein_id=YP_403779.1;transl_table=11
NC_007606.1	RefSeq	gene	2006782	2007867	.	+	.	ID=gene2160;Dbxref=GeneID:3797482;Name=rfbB;Note=SDY2204;gbkey=Gene;gene=rfbB;gene_biotype=protein_coding;locus_tag=SDY_2204
NC_007606.1	RefSeq	CDS	2006782	2007867	.	+	0	ID=cds1919;Parent=gene2160;Dbxref=Genbank:YP_403780.1,GeneID:3797482;Name=YP_403780.1;Note=NAD(P) binding%3B catalyzes the formation of dTDP-4-dehydro-6-deoxy-D-glucose from dTDP-glucose;gbkey=CDS;gene=rfbB;product=dTDP-glucose-4%2C6-dehydratase;protein_id=YP_403780.1;transl_table=11
NC_007606.1	RefSeq	gene	2007867	2008766	.	+	.	ID=gene2161;Dbxref=GeneID:3797483;Name=rfbD;Note=SDY2205;gbkey=Gene;gene=rfbD;gene_biotype=protein_coding;locus_tag=SDY_2205
NC_007606.1	RefSeq	CDS	2007867	2008766	.	+	0	ID=cds1920;Parent=gene2161;Dbxref=Genbank:YP_403781.1,GeneID:3797483;Name=YP_403781.1;Note=''with dTDP-4-dehydrorhamnose 3%2C5-epimerase forms a complex known as dTDP-L-rhamnose synthetase%3B catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose'';gbkey=CDS;gene=rfbD;product=dTDP-4-dehydrorhamnose reductase;protein_id=YP_403781.1;transl_table=11
NC_007606.1	RefSeq	gene	2008824	2009702	.	+	.	ID=gene2162;Dbxref=GeneID:3797484;Name=rfbA;Note=SDY2206;gbkey=Gene;gene=rfbA;gene_biotype=protein_coding;locus_tag=SDY_2206
NC_007606.1	RefSeq	CDS	2008824	2009702	.	+	0	ID=cds1921;Parent=gene2162;Dbxref=Genbank:YP_403782.1,GeneID:3797484;Name=YP_403782.1;Note=Code: M%3B COG: COG1209;gbkey=CDS;gene=rfbA;product=glucose-1-phosphate thymidylyltransferase;protein_id=YP_403782.1;transl_table=11
NC_007606.1	RefSeq	gene	2009705	2010262	.	+	.	ID=gene2163;Dbxref=GeneID:3797485;Name=rfbC;Note=SDY2207;gbkey=Gene;gene=rfbC;gene_biotype=protein_coding;locus_tag=SDY_2207
NC_007606.1	RefSeq	CDS	2009705	2010262	.	+	0	ID=cds1922;Parent=gene2163;Dbxref=Genbank:YP_403783.1,GeneID:3797485;Name=YP_403783.1;Note=Code: M%3B COG: COG1898;gbkey=CDS;gene=rfbC;product=dTDP-4-dehydrorhamnose 3%2C5-epimerase;protein_id=YP_403783.1;transl_table=11
NC_007606.1	RefSeq	gene	2010259	2011449	.	+	.	ID=gene2164;Dbxref=GeneID:3797486;Name=rfbX;Note=SDY2208;gbkey=Gene;gene=rfbX;gene_biotype=protein_coding;locus_tag=SDY_2208
NC_007606.1	RefSeq	CDS	2010259	2011449	.	+	0	ID=cds1923;Parent=gene2164;Dbxref=Genbank:YP_403784.1,GeneID:3797486;Name=YP_403784.1;Note=Code: R%3B COG: COG2244;gbkey=CDS;gene=rfbX;product=O-antigen transporter;protein_id=YP_403784.1;transl_table=11
NC_007606.1	RefSeq	gene	2011446	2012588	.	+	.	ID=gene2165;Dbxref=GeneID:3797487;Name=rfc;Note=SDY2209;gbkey=Gene;gene=rfc;gene_biotype=protein_coding;locus_tag=SDY_2209
NC_007606.1	RefSeq	CDS	2011446	2012588	.	+	0	ID=cds1924;Parent=gene2165;Dbxref=Genbank:YP_403785.1,GeneID:3797487;Name=YP_403785.1;gbkey=CDS;gene=rfc;product=O-antigen polymerase;protein_id=YP_403785.1;transl_table=11
NC_007606.1	RefSeq	gene	2012581	2013429	.	+	.	ID=gene2166;Dbxref=GeneID:3797488;Name=rfbR;Note=SDY2210;gbkey=Gene;gene=rfbR;gene_biotype=protein_coding;locus_tag=SDY_2210
NC_007606.1	RefSeq	CDS	2012581	2013429	.	+	0	ID=cds1925;Parent=gene2166;Dbxref=Genbank:YP_403786.1,GeneID:3797488;Name=YP_403786.1;gbkey=CDS;gene=rfbR;product=rhamnosyl transferase II;protein_id=YP_403786.1;transl_table=11
NC_007606.1	RefSeq	gene	2013454	2014365	.	+	.	ID=gene2167;Dbxref=GeneID:3797489;Name=rfbQ;Note=SDY2211;gbkey=Gene;gene=rfbQ;gene_biotype=protein_coding;locus_tag=SDY_2211
NC_007606.1	RefSeq	CDS	2013454	2014365	.	+	0	ID=cds1926;Parent=gene2167;Dbxref=Genbank:YP_403787.1,GeneID:3797489;Name=YP_403787.1;gbkey=CDS;gene=rfbQ;product=rhamnosyl transferase I;protein_id=YP_403787.1;transl_table=11
NC_007606.1	RefSeq	gene	2015551	2016957	.	+	.	ID=gene2168;Dbxref=GeneID:3797490;Name=gnd;Note=SDY2212;gbkey=Gene;gene=gnd;gene_biotype=protein_coding;locus_tag=SDY_2212
NC_007606.1	RefSeq	CDS	2015551	2016957	.	+	0	ID=cds1927;Parent=gene2168;Dbxref=Genbank:YP_403788.1,GeneID:3797490;Name=YP_403788.1;Note=catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate;gbkey=CDS;gene=gnd;product=6-phosphogluconate dehydrogenase;protein_id=YP_403788.1;transl_table=11
NC_007606.1	RefSeq	gene	2017207	2018373	.	+	.	ID=gene2169;Dbxref=GeneID:3797491;Name=ugd;Note=SDY2213;gbkey=Gene;gene=ugd;gene_biotype=protein_coding;locus_tag=SDY_2213
NC_007606.1	RefSeq	CDS	2017207	2018373	.	+	0	ID=cds1928;Parent=gene2169;Dbxref=Genbank:YP_403789.1,GeneID:3797491;Name=YP_403789.1;Note=Code: M%3B COG: COG1004;gbkey=CDS;gene=ugd;product=UDP-glucose 6-dehydrogenase;protein_id=YP_403789.1;transl_table=11
NC_007606.1	RefSeq	gene	2018463	2019497	.	+	.	ID=gene2170;Dbxref=GeneID:3797492;Name=wzzB;Note=SDY2214;gbkey=Gene;gene=wzzB;gene_biotype=protein_coding;locus_tag=SDY_2214
NC_007606.1	RefSeq	CDS	2018463	2019497	.	+	0	ID=cds1929;Parent=gene2170;Dbxref=Genbank:YP_403790.1,GeneID:3797492;Name=YP_403790.1;Note=Code: M%3B COG: COG3765;gbkey=CDS;gene=wzzB;product=O-antigen chain length regulator;protein_id=YP_403790.1;transl_table=11
NC_007606.1	RefSeq	gene	2019594	2020205	.	-	.	ID=gene2171;Dbxref=GeneID:3797493;Name=hisI;Note=SDY2215;gbkey=Gene;gene=hisI;gene_biotype=protein_coding;locus_tag=SDY_2215
NC_007606.1	RefSeq	CDS	2019594	2020205	.	-	0	ID=cds1930;Parent=gene2171;Dbxref=Genbank:YP_403791.1,GeneID:3797493;Name=YP_403791.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis;gbkey=CDS;gene=hisI;product=bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase;protein_id=YP_403791.1;transl_table=11
NC_007606.1	RefSeq	gene	2020199	2020975	.	-	.	ID=gene2172;Dbxref=GeneID:3797494;Name=hisF;Note=SDY2216;gbkey=Gene;gene=hisF;gene_biotype=protein_coding;locus_tag=SDY_2216
NC_007606.1	RefSeq	CDS	2020199	2020975	.	-	0	ID=cds1931;Parent=gene2172;Dbxref=Genbank:YP_403792.1,GeneID:3797494;Name=YP_403792.1;Note=''catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamideribonucleotide and glutamate%3B the HisF subunit acts as a cyclase'';gbkey=CDS;gene=hisF;product=imidazole glycerol phosphate synthase subunit HisF;protein_id=YP_403792.1;transl_table=11
NC_007606.1	RefSeq	gene	2020957	2021694	.	-	.	ID=gene2173;Dbxref=GeneID:3797495;Name=hisA;Note=SDY2217;gbkey=Gene;gene=hisA;gene_biotype=protein_coding;locus_tag=SDY_2217
NC_007606.1	RefSeq	CDS	2020957	2021694	.	-	0	ID=cds1932;Parent=gene2173;Dbxref=Genbank:YP_403793.2,GeneID:3797495;Name=YP_403793.2;Note=catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l-(5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide;gbkey=CDS;gene=hisA;product=1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase;protein_id=YP_403793.2;transl_table=11
NC_007606.1	RefSeq	gene	2021694	2022284	.	-	.	ID=gene2174;Dbxref=GeneID:3797496;Name=hisH;Note=SDY2218;gbkey=Gene;gene=hisH;gene_biotype=protein_coding;locus_tag=SDY_2218
NC_007606.1	RefSeq	CDS	2021694	2022284	.	-	0	ID=cds1933;Parent=gene2174;Dbxref=Genbank:YP_403794.1,GeneID:3797496;Name=YP_403794.1;Note=''with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate%2C 5-aminoimidazol-4-carboxamide ribonucleotide%2C and glutamate in histidine biosynthesis%3B the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide'';gbkey=CDS;gene=hisH;product=imidazole glycerol phosphate synthase subunit HisH;protein_id=YP_403794.1;transl_table=11
NC_007606.1	RefSeq	gene	2022284	2023351	.	-	.	ID=gene2175;Dbxref=GeneID:3797497;Name=hisB;Note=SDY2219;gbkey=Gene;gene=hisB;gene_biotype=protein_coding;locus_tag=SDY_2219
NC_007606.1	RefSeq	CDS	2022284	2023351	.	-	0	ID=cds1934;Parent=gene2175;Dbxref=Genbank:YP_403795.2,GeneID:3797497;Name=YP_403795.2;Note=catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate;gbkey=CDS;gene=hisB;product=imidazole glycerol-phosphate dehydratase/histidinol phosphatase;protein_id=YP_403795.2;transl_table=11
NC_007606.1	RefSeq	gene	2023351	2024421	.	-	.	ID=gene2176;Dbxref=GeneID:3797498;Name=hisC;Note=SDY2220;gbkey=Gene;gene=hisC;gene_biotype=protein_coding;locus_tag=SDY_2220
NC_007606.1	RefSeq	CDS	2023351	2024421	.	-	0	ID=cds1935;Parent=gene2176;Dbxref=Genbank:YP_403796.1,GeneID:3797498;Name=YP_403796.1;Note=catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis;gbkey=CDS;gene=hisC;product=histidinol-phosphate aminotransferase;protein_id=YP_403796.1;transl_table=11
NC_007606.1	RefSeq	gene	2024418	2025722	.	-	.	ID=gene2177;Dbxref=GeneID:3797499;Name=hisD;Note=SDY2221;gbkey=Gene;gene=hisD;gene_biotype=protein_coding;locus_tag=SDY_2221
NC_007606.1	RefSeq	CDS	2024418	2025722	.	-	0	ID=cds1936;Parent=gene2177;Dbxref=Genbank:YP_403797.1,GeneID:3797499;Name=YP_403797.1;Note=catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis%3B functions as a dimer;gbkey=CDS;gene=hisD;product=histidinol dehydrogenase;protein_id=YP_403797.1;transl_table=11
NC_007606.1	RefSeq	gene	2025728	2026627	.	-	.	ID=gene2178;Dbxref=GeneID:3797143;Name=hisG;Note=SDY2222;gbkey=Gene;gene=hisG;gene_biotype=protein_coding;locus_tag=SDY_2222
NC_007606.1	RefSeq	CDS	2025728	2026627	.	-	0	ID=cds1937;Parent=gene2178;Dbxref=Genbank:YP_403798.1,GeneID:3797143;Name=YP_403798.1;Note=long form of enzyme%3B catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate%3B crucial role in histidine biosynthesis%3B forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors;gbkey=CDS;gene=hisG;product=ATP phosphoribosyltransferase;protein_id=YP_403798.1;transl_table=11
NC_007606.1	RefSeq	gene	2027230	2028054	.	+	.	ID=gene2179;Dbxref=GeneID:3797144;Name=SDY_2223;Note=SDY2223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2223
NC_007606.1	RefSeq	CDS	2027230	2028054	.	+	0	ID=cds1938;Parent=gene2179;Dbxref=Genbank:YP_403799.1,GeneID:3797144;Name=YP_403799.1;Note=Code: MG%3B COG: COG0451;gbkey=CDS;product=nucleoside-diphosphate-sugar epimerase;protein_id=YP_403799.1;transl_table=11
NC_007606.1	RefSeq	gene	2028100	2029029	.	+	.	ID=gene2180;Dbxref=GeneID:3797145;Name=yeeY;Note=SDY2224;gbkey=Gene;gene=yeeY;gene_biotype=pseudogene;locus_tag=SDY_2224;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2029290	2030654	.	+	.	ID=gene2181;Dbxref=GeneID:3797147;Name=yeeF;Note=SDY2226;gbkey=Gene;gene=yeeF;gene_biotype=protein_coding;locus_tag=SDY_2226
NC_007606.1	RefSeq	CDS	2029290	2030654	.	+	0	ID=cds1939;Parent=gene2181;Dbxref=Genbank:YP_403802.1,GeneID:3797147;Name=YP_403802.1;Note=Code: E%3B COG: COG0531;gbkey=CDS;gene=yeeF;product=amino acid/amine transport protein;protein_id=YP_403802.1;transl_table=11
NC_007606.1	RefSeq	region	2031163	2032493	.	-	.	ID=id378;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2031174	2032079	.	-	.	ID=gene2182;Dbxref=GeneID:3797149;Name=SDY_2228;Note=SDY2228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2228
NC_007606.1	RefSeq	CDS	2031174	2032079	.	-	0	ID=cds1940;Parent=gene2182;Dbxref=Genbank:YP_403803.2,GeneID:3797149;Name=YP_403803.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_403803.2;transl_table=11
NC_007606.1	RefSeq	gene	2032037	2032402	.	-	.	ID=gene2183;Dbxref=GeneID:3797150;Name=SDY_2229;Note=SDY2229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2229
NC_007606.1	RefSeq	CDS	2032037	2032402	.	-	0	ID=cds1941;Parent=gene2183;Dbxref=Genbank:YP_403804.1,GeneID:3797150;Name=YP_403804.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_403804.1;transl_table=11
NC_007606.1	RefSeq	gene	2032466	2033215	.	+	.	ID=gene2184;Dbxref=GeneID:3797148;Name=yeeE;Note=SDY2227%3B contains IS2 insertion%3B original product:  transport system permease;gbkey=Gene;gene=yeeE;gene_biotype=pseudogene;locus_tag=SDY_2227;pseudo=true
NC_007606.1	RefSeq	gene	2033229	2033456	.	+	.	ID=gene2185;Dbxref=GeneID:3797151;Name=yeeD;Note=SDY2230;gbkey=Gene;gene=yeeD;gene_biotype=protein_coding;locus_tag=SDY_2230
NC_007606.1	RefSeq	CDS	2033229	2033456	.	+	0	ID=cds1942;Parent=gene2185;Dbxref=Genbank:YP_403805.1,GeneID:3797151;Name=YP_403805.1;Note=Code: O%3B COG: COG0425;gbkey=CDS;gene=yeeD;product=hypothetical protein;protein_id=YP_403805.1;transl_table=11
NC_007606.1	RefSeq	gene	2033499	2034926	.	-	.	ID=gene2186;Dbxref=GeneID:3797152;Name=sbcB;Note=SDY2231;gbkey=Gene;gene=sbcB;gene_biotype=protein_coding;locus_tag=SDY_2231
NC_007606.1	RefSeq	CDS	2033499	2034926	.	-	0	ID=cds1943;Parent=gene2186;Dbxref=Genbank:YP_403806.1,GeneID:3797152;Name=YP_403806.1;Note=Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates;gbkey=CDS;gene=sbcB;product=exonuclease I;protein_id=YP_403806.1;transl_table=11
NC_007606.1	RefSeq	region	2035162	2035928	.	-	.	ID=id379;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2035177	2035572	.	-	.	ID=gene2187;Dbxref=GeneID:3797153;Name=SDY_2232;Note=SDY2232;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2232
NC_007606.1	RefSeq	CDS	2035177	2035572	.	-	0	ID=cds1944;Parent=gene2187;Dbxref=Genbank:YP_403807.1,GeneID:3797153;Name=YP_403807.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403807.1;transl_table=11
NC_007606.1	RefSeq	gene	2035599	2035871	.	-	.	ID=gene2188;Dbxref=GeneID:18263085;Name=SDY_4698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4698
NC_007606.1	RefSeq	CDS	2035599	2035871	.	-	0	ID=cds1945;Parent=gene2188;Dbxref=Genbank:YP_009000771.1,GeneID:18263085;Name=YP_009000771.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000771.1;transl_table=11
NC_007606.1	RefSeq	gene	2035938	2037074	.	+	.	ID=gene2189;Dbxref=GeneID:3797154;Name=dacD;Note=SDY2233;gbkey=Gene;gene=dacD;gene_biotype=protein_coding;locus_tag=SDY_2233
NC_007606.1	RefSeq	CDS	2035938	2037074	.	+	0	ID=cds1946;Parent=gene2189;Dbxref=Genbank:YP_403808.1,GeneID:3797154;Name=YP_403808.1;Note=''removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors%3B penicillin-binding protein 6B%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains'';gbkey=CDS;gene=dacD;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_403808.1;transl_table=11
NC_007606.1	RefSeq	gene	2037193	2038440	.	+	.	ID=gene2190;Dbxref=GeneID:3797155;Name=sbmC;Note=SDY2234%3B contains iso-IS1 insertion%3B original product: DNA gyrase inhibitory protein;gbkey=Gene;gene=sbmC;gene_biotype=pseudogene;locus_tag=SDY_2234;pseudo=true
NC_007606.1	RefSeq	region	2037534	2038299	.	+	.	ID=id380;Dbxref=GeneID:3797155;gbkey=mobile_element;gene=sbmC
NC_007606.1	RefSeq	gene	2037591	2037863	.	+	.	ID=gene2191;Dbxref=GeneID:18263086;Name=SDY_4699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4699
NC_007606.1	RefSeq	CDS	2037591	2037863	.	+	0	ID=cds1947;Parent=gene2191;Dbxref=Genbank:YP_009000772.1,GeneID:18263086;Name=YP_009000772.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000772.1;transl_table=11
NC_007606.1	RefSeq	gene	2037890	2038285	.	+	.	ID=gene2192;Dbxref=GeneID:3797156;Name=SDY_2235;Note=SDY2235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2235
NC_007606.1	RefSeq	CDS	2037890	2038285	.	+	0	ID=cds1948;Parent=gene2192;Dbxref=Genbank:YP_403809.1,GeneID:3797156;Name=YP_403809.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403809.1;transl_table=11
NC_007606.1	RefSeq	gene	2038639	2039697	.	+	.	ID=gene2193;Dbxref=GeneID:3797157;Name=yeeA;Note=SDY2236;gbkey=Gene;gene=yeeA;gene_biotype=protein_coding;locus_tag=SDY_2236
NC_007606.1	RefSeq	CDS	2038639	2039697	.	+	0	ID=cds1949;Parent=gene2193;Dbxref=Genbank:YP_403810.1,GeneID:3797157;Name=YP_403810.1;Note=Code: S%3B COG: COG1289;gbkey=CDS;gene=yeeA;product=hypothetical protein;protein_id=YP_403810.1;transl_table=11
NC_007606.1	RefSeq	gene	2039803	2040198	.	+	.	ID=gene2194;Dbxref=GeneID:3797158;Name=yeeX;Note=SDY2237;gbkey=Gene;gene=yeeX;gene_biotype=protein_coding;locus_tag=SDY_2237
NC_007606.1	RefSeq	CDS	2039803	2040198	.	+	0	ID=cds1950;Parent=gene2194;Dbxref=Genbank:YP_403811.1,GeneID:3797158;Name=YP_403811.1;Note=Code: S%3B COG: COG2926;gbkey=CDS;gene=yeeX;product=hypothetical protein;protein_id=YP_403811.1;transl_table=11
NC_007606.1	RefSeq	region	2040413	2041178	.	-	.	ID=id381;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2040427	2040822	.	-	.	ID=gene2195;Dbxref=GeneID:3797159;Name=SDY_2238;Note=SDY2238;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2238
NC_007606.1	RefSeq	CDS	2040427	2040822	.	-	0	ID=cds1951;Parent=gene2195;Dbxref=Genbank:YP_403812.1,GeneID:3797159;Name=YP_403812.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403812.1;transl_table=11
NC_007606.1	RefSeq	gene	2041017	2041358	.	+	.	ID=gene2196;Dbxref=GeneID:3797160;Name=SDY_2239;Note=SDY2239;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2239
NC_007606.1	RefSeq	CDS	2041017	2041358	.	+	0	ID=cds1952;Parent=gene2196;Dbxref=Genbank:YP_403813.1,GeneID:3797160;Name=YP_403813.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403813.1;transl_table=11
NC_007606.1	RefSeq	gene	2041772	2042317	.	+	.	ID=gene2197;Dbxref=GeneID:3797161;Name=cobU;Note=SDY2240;gbkey=Gene;gene=cobU;gene_biotype=protein_coding;locus_tag=SDY_2240
NC_007606.1	RefSeq	CDS	2041772	2042317	.	+	0	ID=cds1953;Parent=gene2197;Dbxref=Genbank:YP_403814.1,GeneID:3797161;Name=YP_403814.1;Note=catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP;gbkey=CDS;gene=cobU;product=adenosylcobinamide kinase;protein_id=YP_403814.1;transl_table=11
NC_007606.1	RefSeq	gene	2042314	2043057	.	+	.	ID=gene2198;Dbxref=GeneID:3797162;Name=cobS;Note=SDY2241;gbkey=Gene;gene=cobS;gene_biotype=protein_coding;locus_tag=SDY_2241
NC_007606.1	RefSeq	CDS	2042314	2043057	.	+	0	ID=cds1954;Parent=gene2198;Dbxref=Genbank:YP_403815.1,GeneID:3797162;Name=YP_403815.1;Note=catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole;gbkey=CDS;gene=cobS;product=cobalamin synthase;protein_id=YP_403815.1;transl_table=11
NC_007606.1	RefSeq	gene	2043069	2044148	.	+	.	ID=gene2199;Dbxref=GeneID:3796976;Name=cobT;Note=SDY2242;gbkey=Gene;gene=cobT;gene_biotype=protein_coding;locus_tag=SDY_2242
NC_007606.1	RefSeq	CDS	2043069	2044148	.	+	0	ID=cds1955;Parent=gene2199;Dbxref=Genbank:YP_403816.1,GeneID:3796976;Name=YP_403816.1;Note=''catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5%2C6-dimethylbenzimidazole'';gbkey=CDS;gene=cobT;product=nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase;protein_id=YP_403816.1;transl_table=11
NC_007606.1	RefSeq	gene	2044213	2045145	.	+	.	ID=gene2200;Dbxref=GeneID:3796977;Name=erfK;Note=SDY2243;gbkey=Gene;gene=erfK;gene_biotype=protein_coding;locus_tag=SDY_2243
NC_007606.1	RefSeq	CDS	2044213	2045145	.	+	0	ID=cds1956;Parent=gene2200;Dbxref=Genbank:YP_403817.1,GeneID:3796977;Name=YP_403817.1;Note=Code: S%3B COG: COG1376;gbkey=CDS;gene=erfK;product=hypothetical protein;protein_id=YP_403817.1;transl_table=11
NC_007606.1	RefSeq	gene	2045201	2045276	.	-	.	ID=gene2201;Dbxref=GeneID:3796978;Name=SDY_2244;Note=SDY2244;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2244
NC_007606.1	RefSeq	tRNA	2045201	2045276	.	-	.	ID=rna39;Parent=gene2201;Dbxref=GeneID:3796978;codons=41;gbkey=tRNA;product=tRNA-Asn
NC_007606.1	RefSeq	exon	2045201	2045276	.	-	.	ID=id382;Parent=rna39;Dbxref=GeneID:3796978;codons=41;gbkey=tRNA;product=tRNA-Asn
NC_007606.1	RefSeq	gene	2045602	2046519	.	+	.	ID=gene2202;Dbxref=GeneID:3796979;Name=nac;Note=SDY2245;gbkey=Gene;gene=nac;gene_biotype=protein_coding;locus_tag=SDY_2245
NC_007606.1	RefSeq	CDS	2045602	2046519	.	+	0	ID=cds1957;Parent=gene2202;Dbxref=Genbank:YP_403818.1,GeneID:3796979;Name=YP_403818.1;Note=''Transcriptional activator for the hut%2C put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation'';gbkey=CDS;gene=nac;product=nitrogen assimilation transcriptional regulator;protein_id=YP_403818.1;transl_table=11
NC_007606.1	RefSeq	gene	2046621	2047571	.	+	.	ID=gene2203;Dbxref=GeneID:3796980;Name=cbl;Note=SDY2246;gbkey=Gene;gene=cbl;gene_biotype=protein_coding;locus_tag=SDY_2246
NC_007606.1	RefSeq	CDS	2046621	2047571	.	+	0	ID=cds1958;Parent=gene2203;Dbxref=Genbank:YP_403819.1,GeneID:3796980;Name=YP_403819.1;Note=LysR-type transcriptional regulator similar to CysB%3B contains helix-turn-helix (HTH) motif%3B in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon%3B regulated by CysB;gbkey=CDS;gene=cbl;product=transcriptional regulator Cbl;protein_id=YP_403819.1;transl_table=11
NC_007606.1	RefSeq	gene	2047609	2047684	.	-	.	ID=gene2204;Dbxref=GeneID:3796981;Name=SDY_2247;Note=SDY2247;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2247
NC_007606.1	RefSeq	tRNA	2047609	2047684	.	-	.	ID=rna40;Parent=gene2204;Dbxref=GeneID:3796981;codons=41;gbkey=tRNA;product=tRNA-Asn
NC_007606.1	RefSeq	exon	2047609	2047684	.	-	.	ID=id383;Parent=rna40;Dbxref=GeneID:3796981;codons=41;gbkey=tRNA;product=tRNA-Asn
NC_007606.1	RefSeq	gene	2048019	2048519	.	+	.	ID=gene2205;Dbxref=GeneID:3796982;Name=SDY_2248;Note=SDY2248;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2248
NC_007606.1	RefSeq	CDS	2048019	2048519	.	+	0	ID=cds1959;Parent=gene2205;Dbxref=Genbank:YP_403820.1,GeneID:3796982;Name=YP_403820.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403820.1;transl_table=11
NC_007606.1	RefSeq	gene	2048510	2049358	.	+	.	ID=gene2206;Dbxref=GeneID:3796983;Name=SDY_2249;Note=SDY2249;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2249
NC_007606.1	RefSeq	CDS	2048510	2049358	.	+	0	ID=cds1960;Parent=gene2206;Dbxref=Genbank:YP_403821.1,GeneID:3796983;Name=YP_403821.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403821.1;transl_table=11
NC_007606.1	RefSeq	gene	2049416	2049491	.	+	.	ID=gene2207;Dbxref=GeneID:3796984;Name=SDY_2250;Note=SDY2250;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2250
NC_007606.1	RefSeq	tRNA	2049416	2049491	.	+	.	ID=rna41;Parent=gene2207;Dbxref=GeneID:3796984;codons=41;gbkey=tRNA;product=tRNA-Asn
NC_007606.1	RefSeq	exon	2049416	2049491	.	+	.	ID=id384;Parent=rna41;Dbxref=GeneID:3796984;codons=41;gbkey=tRNA;product=tRNA-Asn
NC_007606.1	RefSeq	region	2049564	2050331	.	+	.	ID=id385;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2049619	2049894	.	+	.	ID=gene2208;Dbxref=GeneID:3796985;Name=insA;Note=SDY2251;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2251
NC_007606.1	RefSeq	CDS	2049619	2049894	.	+	0	ID=cds1961;Parent=gene2208;Dbxref=Genbank:YP_403822.1,GeneID:3796985;Name=YP_403822.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403822.1;transl_table=11
NC_007606.1	RefSeq	gene	2049939	2050316	.	+	.	ID=gene2209;Dbxref=GeneID:3796986;Name=insB;Note=SDY2252;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2252
NC_007606.1	RefSeq	CDS	2049939	2050316	.	+	0	ID=cds1962;Parent=gene2209;Dbxref=Genbank:YP_403823.1,GeneID:3796986;Name=YP_403823.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403823.1;transl_table=11
NC_007606.1	RefSeq	gene	2050352	2051806	.	-	.	ID=gene2210;Dbxref=GeneID:3796987;Name=amn;Note=SDY2253;gbkey=Gene;gene=amn;gene_biotype=protein_coding;locus_tag=SDY_2253
NC_007606.1	RefSeq	CDS	2050352	2051806	.	-	0	ID=cds1963;Parent=gene2210;Dbxref=Genbank:YP_403824.1,GeneID:3796987;Name=YP_403824.1;Note=Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile;gbkey=CDS;gene=amn;product=AMP nucleosidase;protein_id=YP_403824.1;transl_table=11
NC_007606.1	RefSeq	gene	2051908	2053224	.	-	.	ID=gene2211;Dbxref=GeneID:3796988;Name=shiA;Note=SDY2254;gbkey=Gene;gene=shiA;gene_biotype=protein_coding;locus_tag=SDY_2254
NC_007606.1	RefSeq	CDS	2051908	2053224	.	-	0	ID=cds1964;Parent=gene2211;Dbxref=Genbank:YP_403825.1,GeneID:3796988;Name=YP_403825.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=shiA;product=shikimate transporter;protein_id=YP_403825.1;transl_table=11
NC_007606.1	RefSeq	region	2053672	2054214	.	-	.	ID=id386;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2054303	2054554	.	+	.	ID=gene2212;Dbxref=GeneID:3796991;Name=SDY_2257;Note=SDY2257;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2257
NC_007606.1	RefSeq	CDS	2054303	2054554	.	+	0	ID=cds1965;Parent=gene2212;Dbxref=Genbank:YP_403828.1,GeneID:3796991;Name=YP_403828.1;Note=Code: K%3B COG: COG3609;gbkey=CDS;product=hypothetical protein;protein_id=YP_403828.1;transl_table=11
NC_007606.1	RefSeq	gene	2054574	2054852	.	+	.	ID=gene2213;Dbxref=GeneID:3797026;Name=SDY_2258;Note=SDY2258;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2258
NC_007606.1	RefSeq	CDS	2054574	2054852	.	+	0	ID=cds1966;Parent=gene2213;Dbxref=Genbank:YP_403829.1,GeneID:3797026;Name=YP_403829.1;Note=Code: R%3B COG: COG3668;gbkey=CDS;product=plasmid stabilization protein;protein_id=YP_403829.1;transl_table=11
NC_007606.1	RefSeq	gene	2054955	2056316	.	+	.	ID=gene2214;Dbxref=GeneID:3797027;Name=yegQ;Note=SDY2259;gbkey=Gene;gene=yegQ;gene_biotype=protein_coding;locus_tag=SDY_2259
NC_007606.1	RefSeq	CDS	2054955	2056316	.	+	0	ID=cds1967;Parent=gene2214;Dbxref=Genbank:YP_403830.1,GeneID:3797027;Name=YP_403830.1;Note=Code: O%3B COG: COG0826;gbkey=CDS;gene=yegQ;product=hypothetical protein;protein_id=YP_403830.1;transl_table=11
NC_007606.1	RefSeq	gene	2056646	2056978	.	-	.	ID=gene2215;Dbxref=GeneID:3797028;Name=SDY_2260;Note=SDY2260;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2260
NC_007606.1	RefSeq	CDS	2056646	2056978	.	-	0	ID=cds1968;Parent=gene2215;Dbxref=Genbank:YP_403831.1,GeneID:3797028;Name=YP_403831.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403831.1;transl_table=11
NC_007606.1	RefSeq	gene	2057377	2058276	.	+	.	ID=gene2216;Dbxref=GeneID:3797029;Name=SDY_2261;Note=SDY2261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2261
NC_007606.1	RefSeq	CDS	2057377	2058276	.	+	0	ID=cds1969;Parent=gene2216;Dbxref=Genbank:YP_403832.1,GeneID:3797029;Name=YP_403832.1;Note=cytosolic protein with phosphatidylglycerol kinase activity%3B undetermined physiological role;gbkey=CDS;product=lipid kinase;protein_id=YP_403832.1;transl_table=11
NC_007606.1	RefSeq	gene	2058358	2059137	.	-	.	ID=gene2217;Dbxref=GeneID:3797030;Name=gatR;Note=SDY2262;gbkey=Gene;gene=gatR;gene_biotype=protein_coding;locus_tag=SDY_2262
NC_007606.1	RefSeq	CDS	2058358	2059137	.	-	0	ID=cds1970;Parent=gene2217;Dbxref=Genbank:YP_403833.1,GeneID:3797030;Name=YP_403833.1;Note=Code: KG%3B COG: COG1349;gbkey=CDS;gene=gatR;product=galactitol utilization operon repressor;protein_id=YP_403833.1;transl_table=11
NC_007606.1	RefSeq	gene	2059237	2060277	.	-	.	ID=gene2218;Dbxref=GeneID:3797031;Name=gatD;Note=SDY2263;gbkey=Gene;gene=gatD;gene_biotype=protein_coding;locus_tag=SDY_2263
NC_007606.1	RefSeq	CDS	2059237	2060277	.	-	0	ID=cds1971;Parent=gene2218;Dbxref=Genbank:YP_403834.1,GeneID:3797031;Name=YP_403834.1;Note=Zn-dependent%3B NAD(P)-binding%3B catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate;gbkey=CDS;gene=gatD;product=galactitol-1-phosphate dehydrogenase;protein_id=YP_403834.1;transl_table=11
NC_007606.1	RefSeq	gene	2060463	2061680	.	-	.	ID=gene2219;Dbxref=GeneID:3797032;Name=gatC;Note=SDY2264%3B contains in-frame stop codon%3B original product: PTS system galactitol-specific enzyme IIC;gbkey=Gene;gene=gatC;gene_biotype=pseudogene;locus_tag=SDY_2264;pseudo=true
NC_007606.1	RefSeq	gene	2061709	2061969	.	-	.	ID=gene2220;Dbxref=GeneID:3797033;Name=gatB;Note=SDY2265;gbkey=Gene;gene=gatB;gene_biotype=protein_coding;locus_tag=SDY_2265
NC_007606.1	RefSeq	CDS	2061709	2061969	.	-	0	ID=cds1972;Parent=gene2220;Dbxref=Genbank:YP_403835.1,GeneID:3797033;Name=YP_403835.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;gene=gatB;product=PTS system galactitol-specific transporter subunit IIB;protein_id=YP_403835.1;transl_table=11
NC_007606.1	RefSeq	gene	2062000	2062452	.	-	.	ID=gene2221;Dbxref=GeneID:3797034;Name=gatA;Note=SDY2266%3B contains in-frame stop codon%3B original product: galactitol-specific enzyme IIA of phosphotransferase system;gbkey=Gene;gene=gatA;gene_biotype=pseudogene;locus_tag=SDY_2266;pseudo=true
NC_007606.1	RefSeq	region	2062572	2063337	.	-	.	ID=id387;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2062586	2062981	.	-	.	ID=gene2222;Dbxref=GeneID:3797035;Name=SDY_2267;Note=SDY2267;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2267
NC_007606.1	RefSeq	CDS	2062586	2062981	.	-	0	ID=cds1973;Parent=gene2222;Dbxref=Genbank:YP_403836.1,GeneID:3797035;Name=YP_403836.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403836.1;transl_table=11
NC_007606.1	RefSeq	gene	2063008	2063280	.	-	.	ID=gene2223;Dbxref=GeneID:18263087;Name=SDY_4700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4700
NC_007606.1	RefSeq	CDS	2063008	2063280	.	-	0	ID=cds1974;Parent=gene2223;Dbxref=Genbank:YP_009000773.1,GeneID:18263087;Name=YP_009000773.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000773.1;transl_table=11
NC_007606.1	RefSeq	gene	2063316	2064334	.	-	.	ID=gene2224;Dbxref=GeneID:3797036;Name=gatZ;Note=SDY2268%3B frameshift and truncated%3B original product:  tagatose 6-phosphate kinase 1;gbkey=Gene;gene=gatZ;gene_biotype=pseudogene;locus_tag=SDY_2268;pseudo=true
NC_007606.1	RefSeq	gene	2064363	2065217	.	-	.	ID=gene2225;Dbxref=GeneID:3797037;Name=gatY;Note=SDY2269;gbkey=Gene;gene=gatY;gene_biotype=protein_coding;locus_tag=SDY_2269
NC_007606.1	RefSeq	CDS	2064363	2065217	.	-	0	ID=cds1975;Parent=gene2225;Dbxref=Genbank:YP_403837.2,GeneID:3797037;Name=YP_403837.2;Note=''catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1%2C6-bisphosphate%3B in enteric bacteria there are two D-tagatose 1%2C6-bisphosphate-specific aldolases: KbaY (also called AgaY)%2C involved in catabolism of N-acetyl-galactosamine and D-galactosamine%2C and GatY which is part of the galactitol catabolism pathway'';gbkey=CDS;gene=gatY;product=tagatose-bisphosphate aldolase;protein_id=YP_403837.2;transl_table=11
NC_007606.1	RefSeq	gene	2065447	2066499	.	-	.	ID=gene2226;Dbxref=GeneID:3797038;Name=SDY_2270;Note=SDY2270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2270
NC_007606.1	RefSeq	CDS	2065447	2066499	.	-	0	ID=cds1976;Parent=gene2226;Dbxref=Genbank:YP_403838.2,GeneID:3797038;Name=YP_403838.2;Note=''catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1%2C6-bisphosphate'';gbkey=CDS;product=fructose-bisphosphate aldolase;protein_id=YP_403838.2;transl_table=11
NC_007606.1	RefSeq	gene	2066756	2068033	.	+	.	ID=gene2227;Dbxref=GeneID:3797039;Name=yegT;Note=SDY2271;gbkey=Gene;gene=yegT;gene_biotype=protein_coding;locus_tag=SDY_2271
NC_007606.1	RefSeq	CDS	2066756	2068033	.	+	0	ID=cds1977;Parent=gene2227;Dbxref=Genbank:YP_403839.1,GeneID:3797039;Name=YP_403839.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=yegT;product=nucleoside permease;protein_id=YP_403839.1;transl_table=11
NC_007606.1	RefSeq	gene	2068030	2069034	.	+	.	ID=gene2228;Dbxref=GeneID:3797040;Name=SDY_2272;Note=SDY2272;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2272
NC_007606.1	RefSeq	CDS	2068030	2069034	.	+	0	ID=cds1978;Parent=gene2228;Dbxref=Genbank:YP_403840.1,GeneID:3797040;Name=YP_403840.1;Note=Code: O%3B COG: COG1397;gbkey=CDS;product=hypothetical protein;protein_id=YP_403840.1;transl_table=11
NC_007606.1	RefSeq	gene	2069031	2069996	.	+	.	ID=gene2229;Dbxref=GeneID:3797041;Name=SDY_2273;Note=SDY2273;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2273
NC_007606.1	RefSeq	CDS	2069031	2069996	.	+	0	ID=cds1979;Parent=gene2229;Dbxref=Genbank:YP_403841.1,GeneID:3797041;Name=YP_403841.1;Note=Code: G%3B COG: COG0524;gbkey=CDS;product=kinase;protein_id=YP_403841.1;transl_table=11
NC_007606.1	RefSeq	gene	2069970	2070716	.	-	.	ID=gene2230;Dbxref=GeneID:3797042;Name=yegW;Note=SDY2274;gbkey=Gene;gene=yegW;gene_biotype=protein_coding;locus_tag=SDY_2274
NC_007606.1	RefSeq	CDS	2069970	2070716	.	-	0	ID=cds1980;Parent=gene2230;Dbxref=Genbank:YP_403842.1,GeneID:3797042;Name=YP_403842.1;Note=Code: K%3B COG: COG2188;gbkey=CDS;gene=yegW;product=transcriptional regulator;protein_id=YP_403842.1;transl_table=11
NC_007606.1	RefSeq	gene	2070768	2071586	.	-	.	ID=gene2231;Dbxref=GeneID:3797043;Name=yegX;Note=SDY2275;gbkey=Gene;gene=yegX;gene_biotype=pseudogene;locus_tag=SDY_2275;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2071651	2072451	.	-	.	ID=gene2232;Dbxref=GeneID:3797045;Name=thiD;Note=SDY2277;gbkey=Gene;gene=thiD;gene_biotype=protein_coding;locus_tag=SDY_2277
NC_007606.1	RefSeq	CDS	2071651	2072451	.	-	0	ID=cds1981;Parent=gene2232;Dbxref=Genbank:YP_403845.1,GeneID:3797045;Name=YP_403845.1;Note=catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine;gbkey=CDS;gene=thiD;product=phosphomethylpyrimidine kinase;protein_id=YP_403845.1;transl_table=11
NC_007606.1	RefSeq	gene	2072448	2073236	.	-	.	ID=gene2233;Dbxref=GeneID:3796919;Name=thiM;Note=SDY2278;gbkey=Gene;gene=thiM;gene_biotype=protein_coding;locus_tag=SDY_2278
NC_007606.1	RefSeq	CDS	2072448	2073236	.	-	0	ID=cds1982;Parent=gene2233;Dbxref=Genbank:YP_403846.1,GeneID:3796919;Name=YP_403846.1;Note=catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP;gbkey=CDS;gene=thiM;product=hydroxyethylthiazole kinase;protein_id=YP_403846.1;transl_table=11
NC_007606.1	RefSeq	gene	2073459	2073731	.	-	.	ID=gene2234;Dbxref=GeneID:3796920;Name=yohL;Note=SDY2279;gbkey=Gene;gene=yohL;gene_biotype=protein_coding;locus_tag=SDY_2279
NC_007606.1	RefSeq	CDS	2073459	2073731	.	-	0	ID=cds1983;Parent=gene2234;Dbxref=Genbank:YP_403847.1,GeneID:3796920;Name=YP_403847.1;Note=Code: S%3B COG: COG1937;gbkey=CDS;gene=yohL;product=hypothetical protein;protein_id=YP_403847.1;transl_table=11
NC_007606.1	RefSeq	gene	2073829	2074686	.	+	.	ID=gene2235;Dbxref=GeneID:3796921;Name=yohM;Note=SDY2280;gbkey=Gene;gene=yohM;gene_biotype=protein_coding;locus_tag=SDY_2280
NC_007606.1	RefSeq	CDS	2073829	2074686	.	+	0	ID=cds1984;Parent=gene2235;Dbxref=Genbank:YP_403848.1,GeneID:3796921;Name=YP_403848.1;Note=membrane protein conferring nickel and cobalt resistance;gbkey=CDS;gene=yohM;product=nickel/cobalt efflux protein RcnA;protein_id=YP_403848.1;transl_table=11
NC_007606.1	RefSeq	gene	2074904	2075242	.	+	.	ID=gene2236;Dbxref=GeneID:3796922;Name=SDY_2281;Note=SDY2281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2281
NC_007606.1	RefSeq	CDS	2074904	2075242	.	+	0	ID=cds1985;Parent=gene2236;Dbxref=Genbank:YP_403849.2,GeneID:3796922;Name=YP_403849.2;Note=Code: S%3B COG: COG5455;gbkey=CDS;product=hypothetical protein;protein_id=YP_403849.2;transl_table=11
NC_007606.1	RefSeq	region	2075422	2076187	.	+	.	ID=id388;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2075480	2075752	.	+	.	ID=gene2237;Dbxref=GeneID:18263088;Name=SDY_4701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4701
NC_007606.1	RefSeq	CDS	2075480	2075752	.	+	0	ID=cds1986;Parent=gene2237;Dbxref=Genbank:YP_009000774.1,GeneID:18263088;Name=YP_009000774.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000774.1;transl_table=11
NC_007606.1	RefSeq	region	2076749	2077518	.	-	.	ID=id389;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2076763	2077158	.	-	.	ID=gene2238;Dbxref=GeneID:3796926;Name=SDY_2285;Note=SDY2285;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2285
NC_007606.1	RefSeq	CDS	2076763	2077158	.	-	0	ID=cds1987;Parent=gene2238;Dbxref=Genbank:YP_403853.1,GeneID:3796926;Name=YP_403853.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403853.1;transl_table=11
NC_007606.1	RefSeq	gene	2077185	2077457	.	-	.	ID=gene2239;Dbxref=GeneID:18263089;Name=SDY_4702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4702
NC_007606.1	RefSeq	CDS	2077185	2077457	.	-	0	ID=cds1988;Parent=gene2239;Dbxref=Genbank:YP_009000775.1,GeneID:18263089;Name=YP_009000775.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000775.1;transl_table=11
NC_007606.1	RefSeq	gene	2077541	2079334	.	-	.	ID=gene2240;Dbxref=GeneID:3796928;Name=yehB;Note=SDY2287;gbkey=Gene;gene=yehB;gene_biotype=protein_coding;locus_tag=SDY_2287
NC_007606.1	RefSeq	CDS	2077541	2079334	.	-	0	ID=cds1989;Parent=gene2240;Dbxref=Genbank:YP_403855.1,GeneID:3796928;Name=YP_403855.1;Note=Code: NU%3B COG: COG3188;gbkey=CDS;gene=yehB;product=outer membrane protein;protein_id=YP_403855.1;transl_table=11
NC_007606.1	RefSeq	region	2079440	2080207	.	-	.	ID=id390;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2079455	2079832	.	-	.	ID=gene2241;Dbxref=GeneID:3796929;Name=insB;Note=SDY2288;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2288
NC_007606.1	RefSeq	CDS	2079455	2079832	.	-	0	ID=cds1990;Parent=gene2241;Dbxref=Genbank:YP_403856.1,GeneID:3796929;Name=YP_403856.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403856.1;transl_table=11
NC_007606.1	RefSeq	gene	2079877	2080152	.	-	.	ID=gene2242;Dbxref=GeneID:3796930;Name=insA;Note=SDY2289;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2289
NC_007606.1	RefSeq	CDS	2079877	2080152	.	-	0	ID=cds1991;Parent=gene2242;Dbxref=Genbank:YP_403857.1,GeneID:3796930;Name=YP_403857.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403857.1;transl_table=11
NC_007606.1	RefSeq	region	2080208	2081314	.	-	.	ID=id391;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2080948	2081250	.	-	.	ID=gene2243;Dbxref=GeneID:3796932;Name=SDY_2291;Note=SDY2291;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2291
NC_007606.1	RefSeq	CDS	2080948	2081250	.	-	0	ID=cds1992;Parent=gene2243;Dbxref=Genbank:YP_403859.1,GeneID:3796932;Name=YP_403859.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403859.1;transl_table=11
NC_007606.1	RefSeq	gene	2081395	2082447	.	-	.	ID=gene2244;Dbxref=GeneID:3796933;Name=yceA;Note=SDY2292;gbkey=Gene;gene=yceA;gene_biotype=protein_coding;locus_tag=SDY_2292
NC_007606.1	RefSeq	CDS	2081395	2082447	.	-	0	ID=cds1993;Parent=gene2244;Dbxref=Genbank:YP_403860.1,GeneID:3796933;Name=YP_403860.1;Note=Code: R%3B COG: COG1054;gbkey=CDS;gene=yceA;product=hypothetical protein;protein_id=YP_403860.1;transl_table=11
NC_007606.1	RefSeq	gene	2082672	2083592	.	+	.	ID=gene2245;Dbxref=GeneID:3796934;Name=htrB;Note=SDY2293;gbkey=Gene;gene=htrB;gene_biotype=protein_coding;locus_tag=SDY_2293
NC_007606.1	RefSeq	CDS	2082672	2083592	.	+	0	ID=cds1994;Parent=gene2245;Dbxref=Genbank:YP_403861.1,GeneID:3796934;Name=YP_403861.1;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;gene=htrB;product=lipid A biosynthesis lauroyl acyltransferase;protein_id=YP_403861.1;transl_table=11
NC_007606.1	RefSeq	region	2084262	2085512	.	-	.	ID=id392;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2085138	2085440	.	-	.	ID=gene2246;Dbxref=GeneID:3796937;Name=SDY_2296;Note=SDY2296;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2296
NC_007606.1	RefSeq	CDS	2085138	2085440	.	-	0	ID=cds1995;Parent=gene2246;Dbxref=Genbank:YP_403864.1,GeneID:3796937;Name=YP_403864.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_403864.1;transl_table=11
NC_007606.1	RefSeq	gene	2085936	2086907	.	+	.	ID=gene2247;Dbxref=GeneID:3798177;Name=yceE;Note=SDY2297;gbkey=Gene;gene=yceE;gene_biotype=protein_coding;locus_tag=SDY_2297
NC_007606.1	RefSeq	CDS	2085936	2086907	.	+	0	ID=cds1996;Parent=gene2247;Dbxref=Genbank:YP_403865.1,GeneID:3798177;Name=YP_403865.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=yceE;product=transport protein;protein_id=YP_403865.1;transl_table=11
NC_007606.1	RefSeq	gene	2086862	2086960	.	+	.	ID=gene2248;Dbxref=GeneID:3798178;Name=SDY_2298;Note=SDY2298;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2298
NC_007606.1	RefSeq	CDS	2086862	2086960	.	+	0	ID=cds1997;Parent=gene2248;Dbxref=Genbank:YP_403866.1,GeneID:3798178;Name=YP_403866.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403866.1;transl_table=11
NC_007606.1	RefSeq	gene	2086987	2087364	.	+	.	ID=gene2249;Dbxref=GeneID:3798179;Name=msyB;Note=SDY2299;gbkey=Gene;gene=msyB;gene_biotype=protein_coding;locus_tag=SDY_2299
NC_007606.1	RefSeq	CDS	2086987	2087364	.	+	0	ID=cds1998;Parent=gene2249;Dbxref=Genbank:YP_403867.1,GeneID:3798179;Name=YP_403867.1;gbkey=CDS;gene=msyB;product=hypothetical protein;protein_id=YP_403867.1;transl_table=11
NC_007606.1	RefSeq	gene	2087365	2087592	.	-	.	ID=gene2250;Dbxref=GeneID:3798180;Name=yceK;Note=SDY2300;gbkey=Gene;gene=yceK;gene_biotype=protein_coding;locus_tag=SDY_2300
NC_007606.1	RefSeq	CDS	2087365	2087592	.	-	0	ID=cds1999;Parent=gene2250;Dbxref=Genbank:YP_403868.1,GeneID:3798180;Name=YP_403868.1;Note=Code: R%3B COG: COG5645;gbkey=CDS;gene=yceK;product=hypothetical protein;protein_id=YP_403868.1;transl_table=11
NC_007606.1	RefSeq	gene	2087765	2090308	.	-	.	ID=gene2251;Dbxref=GeneID:3798181;Name=mdoH;Note=SDY2301;gbkey=Gene;gene=mdoH;gene_biotype=protein_coding;locus_tag=SDY_2301
NC_007606.1	RefSeq	CDS	2087765	2090308	.	-	0	ID=cds2000;Parent=gene2251;Dbxref=Genbank:YP_403869.1,GeneID:3798181;Name=YP_403869.1;Note=necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space;gbkey=CDS;gene=mdoH;product=glucosyltransferase MdoH;protein_id=YP_403869.1;transl_table=11
NC_007606.1	RefSeq	gene	2090301	2091836	.	-	.	ID=gene2252;Dbxref=GeneID:3798182;Name=mdoG;Note=SDY2302;gbkey=Gene;gene=mdoG;gene_biotype=protein_coding;gene_synonym=opgG;locus_tag=SDY_2302
NC_007606.1	RefSeq	CDS	2090301	2091836	.	-	0	ID=cds2001;Parent=gene2252;Dbxref=Genbank:YP_403870.1,GeneID:3798182;Name=YP_403870.1;Note=involved in the biosynthesis of osmoregulated periplasmic glucans%3B required for the assembly of the polyglucose structure of glucan;gbkey=CDS;gene=mdoG;product=glucan biosynthesis protein G;protein_id=YP_403870.1;transl_table=11
NC_007606.1	RefSeq	gene	2092230	2093387	.	+	.	ID=gene2253;Dbxref=GeneID:3798183;Name=mdoC;Note=SDY2303;gbkey=Gene;gene=mdoC;gene_biotype=protein_coding;locus_tag=SDY_2303
NC_007606.1	RefSeq	CDS	2092230	2093387	.	+	0	ID=cds2002;Parent=gene2253;Dbxref=Genbank:YP_403871.1,GeneID:3798183;Name=YP_403871.1;Note=required for the transfer of succinyl residues to the glucan backbone;gbkey=CDS;gene=mdoC;product=glucans biosynthesis protein;protein_id=YP_403871.1;transl_table=11
NC_007606.1	RefSeq	gene	2093395	2094876	.	-	.	ID=gene2254;Dbxref=GeneID:3798184;Name=ymdC;Note=SDY2304;gbkey=Gene;gene=ymdC;gene_biotype=protein_coding;locus_tag=SDY_2304
NC_007606.1	RefSeq	CDS	2093395	2094876	.	-	0	ID=cds2003;Parent=gene2254;Dbxref=Genbank:YP_403872.1,GeneID:3798184;Name=YP_403872.1;Note=Code: I%3B COG: COG1502;gbkey=CDS;gene=ymdC;product=synthase;protein_id=YP_403872.1;transl_table=11
NC_007606.1	RefSeq	gene	2094818	2095351	.	-	.	ID=gene2255;Dbxref=GeneID:3798185;Name=SDY_2305;Note=SDY2305;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2305
NC_007606.1	RefSeq	CDS	2094818	2095351	.	-	0	ID=cds2004;Parent=gene2255;Dbxref=Genbank:YP_403873.1,GeneID:3798185;Name=YP_403873.1;Note=Code: R%3B COG: COG2110;gbkey=CDS;product=hypothetical protein;protein_id=YP_403873.1;transl_table=11
NC_007606.1	RefSeq	gene	2095446	2095757	.	-	.	ID=gene2256;Dbxref=GeneID:3798186;Name=SDY_2306;Note=SDY2306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2306
NC_007606.1	RefSeq	CDS	2095446	2095757	.	-	0	ID=cds2005;Parent=gene2256;Dbxref=Genbank:YP_403874.1,GeneID:3798186;Name=YP_403874.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403874.1;transl_table=11
NC_007606.1	RefSeq	region	2096061	2096828	.	+	.	ID=id393;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2096116	2096391	.	+	.	ID=gene2257;Dbxref=GeneID:3798187;Name=insA;Note=SDY2307;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2307
NC_007606.1	RefSeq	CDS	2096116	2096391	.	+	0	ID=cds2006;Parent=gene2257;Dbxref=Genbank:YP_403875.1,GeneID:3798187;Name=YP_403875.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_403875.1;transl_table=11
NC_007606.1	RefSeq	gene	2096436	2096813	.	+	.	ID=gene2258;Dbxref=GeneID:3798188;Name=insB;Note=SDY2308;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2308
NC_007606.1	RefSeq	CDS	2096436	2096813	.	+	0	ID=cds2007;Parent=gene2258;Dbxref=Genbank:YP_403876.1,GeneID:3798188;Name=YP_403876.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403876.1;transl_table=11
NC_007606.1	RefSeq	region	2096829	2098028	.	+	.	ID=id394;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2097272	2098067	.	+	.	ID=gene2259;Dbxref=GeneID:3798190;Name=SDY_2310;Note=SDY2310;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2310;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2097982	2098569	.	-	.	ID=gene2260;Dbxref=GeneID:3798191;Name=yceI;Note=SDY2311;gbkey=Gene;gene=yceI;gene_biotype=protein_coding;locus_tag=SDY_2311
NC_007606.1	RefSeq	CDS	2097982	2098569	.	-	0	ID=cds2008;Parent=gene2260;Dbxref=Genbank:YP_403879.1,GeneID:3798191;Name=YP_403879.1;Note=Code: S%3B COG: COG2353;gbkey=CDS;gene=yceI;product=hypothetical protein;protein_id=YP_403879.1;transl_table=11
NC_007606.1	RefSeq	gene	2098573	2099139	.	-	.	ID=gene2261;Dbxref=GeneID:3798192;Name=SDY_2312;Note=SDY2312;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2312
NC_007606.1	RefSeq	CDS	2098573	2099139	.	-	0	ID=cds2009;Parent=gene2261;Dbxref=Genbank:YP_403880.1,GeneID:3798192;Name=YP_403880.1;Note=Code: C%3B COG: COG3038;gbkey=CDS;product=cytochrome;protein_id=YP_403880.1;transl_table=11
NC_007606.1	RefSeq	gene	2099117	2099380	.	-	.	ID=gene2262;Dbxref=GeneID:3798193;Name=SDY_2313;Note=SDY2313;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2313
NC_007606.1	RefSeq	CDS	2099117	2099380	.	-	0	ID=cds2010;Parent=gene2262;Dbxref=Genbank:YP_403881.1,GeneID:3798193;Name=YP_403881.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403881.1;transl_table=11
NC_007606.1	RefSeq	region	2099219	2099984	.	+	.	ID=id395;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2099276	2099548	.	+	.	ID=gene2263;Dbxref=GeneID:18263090;Name=SDY_4703;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4703
NC_007606.1	RefSeq	CDS	2099276	2099548	.	+	0	ID=cds2011;Parent=gene2263;Dbxref=Genbank:YP_009000776.1,GeneID:18263090;Name=YP_009000776.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000776.1;transl_table=11
NC_007606.1	RefSeq	gene	2099575	2099970	.	+	.	ID=gene2264;Dbxref=GeneID:3798194;Name=SDY_2314;Note=SDY2314;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2314
NC_007606.1	RefSeq	CDS	2099575	2099970	.	+	0	ID=cds2012;Parent=gene2264;Dbxref=Genbank:YP_403882.1,GeneID:3798194;Name=YP_403882.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403882.1;transl_table=11
NC_007606.1	RefSeq	gene	2100400	2102091	.	-	.	ID=gene2265;Dbxref=GeneID:3798195;Name=fruA;Note=SDY2315;gbkey=Gene;gene=fruA;gene_biotype=protein_coding;locus_tag=SDY_2315
NC_007606.1	RefSeq	CDS	2100400	2102091	.	-	0	ID=cds2013;Parent=gene2265;Dbxref=Genbank:YP_403883.1,GeneID:3798195;Name=YP_403883.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;gene=fruA;product=PTS system fructose-specific transporter subunit IIBC;protein_id=YP_403883.1;transl_table=11
NC_007606.1	RefSeq	gene	2102108	2103046	.	-	.	ID=gene2266;Dbxref=GeneID:3798196;Name=fruK;Note=SDY2316;gbkey=Gene;gene=fruK;gene_biotype=protein_coding;locus_tag=SDY_2316
NC_007606.1	RefSeq	CDS	2102108	2103046	.	-	0	ID=cds2014;Parent=gene2266;Dbxref=Genbank:YP_403884.1,GeneID:3798196;Name=YP_403884.1;Note=''converts fructose-1-phosphate and ATP to fructose-1%2C6-bisphosphate and ADP%3B highly specific for fructose-1-phopshate%3B similar to PfkB%3B forms homodimers'';gbkey=CDS;gene=fruK;product=1-phosphofructokinase;protein_id=YP_403884.1;transl_table=11
NC_007606.1	RefSeq	gene	2103046	2104176	.	-	.	ID=gene2267;Dbxref=GeneID:3795616;Name=fruB;Note=SDY2317;gbkey=Gene;gene=fruB;gene_biotype=protein_coding;locus_tag=SDY_2317
NC_007606.1	RefSeq	CDS	2103046	2104176	.	-	0	ID=cds2015;Parent=gene2267;Dbxref=Genbank:YP_403885.1,GeneID:3795616;Name=YP_403885.1;Note=''phosphoenolpyruvate (PEP)-dependent%2C sugar transporting phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr'';gbkey=CDS;gene=fruB;product=bifunctional fructose-specific PTS IIA/HPr protein;protein_id=YP_403885.1;transl_table=11
NC_007606.1	RefSeq	region	2104433	2105206	.	-	.	ID=id396;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2104448	2104843	.	-	.	ID=gene2268;Dbxref=GeneID:3795617;Name=SDY_2318;Note=SDY2318;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2318
NC_007606.1	RefSeq	CDS	2104448	2104843	.	-	0	ID=cds2016;Parent=gene2268;Dbxref=Genbank:YP_403886.1,GeneID:3795617;Name=YP_403886.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403886.1;transl_table=11
NC_007606.1	RefSeq	gene	2104870	2105142	.	-	.	ID=gene2269;Dbxref=GeneID:18263091;Name=SDY_4704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4704
NC_007606.1	RefSeq	CDS	2104870	2105142	.	-	0	ID=cds2017;Parent=gene2269;Dbxref=Genbank:YP_009000777.1,GeneID:18263091;Name=YP_009000777.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000777.1;transl_table=11
NC_007606.1	RefSeq	gene	2105310	2105885	.	+	.	ID=gene2270;Dbxref=GeneID:3795618;Name=ycbP;Note=SDY2319;gbkey=Gene;gene=ycbP;gene_biotype=protein_coding;locus_tag=SDY_2319
NC_007606.1	RefSeq	CDS	2105310	2105885	.	+	0	ID=cds2018;Parent=gene2270;Dbxref=Genbank:YP_403887.1,GeneID:3795618;Name=YP_403887.1;Note=Code: R%3B COG: COG0431;gbkey=CDS;gene=ycbP;product=NAD(P)H-dependent FMN reductase;protein_id=YP_403887.1;transl_table=11
NC_007606.1	RefSeq	gene	2105878	2106870	.	+	.	ID=gene2271;Dbxref=GeneID:3795619;Name=ycbO;Note=SDY2320;gbkey=Gene;gene=ycbO;gene_biotype=protein_coding;locus_tag=SDY_2320
NC_007606.1	RefSeq	CDS	2105878	2106870	.	+	0	ID=cds2019;Parent=gene2271;Dbxref=Genbank:YP_403888.1,GeneID:3795619;Name=YP_403888.1;Note=part of the ABC type transport system SsuABC for aliphatic sulfonates%3B with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ycbO;product=alkanesulfonate transporter substrate-binding subunit;protein_id=YP_403888.1;transl_table=11
NC_007606.1	RefSeq	gene	2106830	2107833	.	+	.	ID=gene2272;Dbxref=GeneID:3795620;Name=SDY_2321;Note=SDY2321;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2321;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2107845	2108636	.	+	.	ID=gene2273;Dbxref=GeneID:3795622;Name=ssuC;Note=SDY2323;gbkey=Gene;gene=ssuC;gene_biotype=protein_coding;locus_tag=SDY_2323
NC_007606.1	RefSeq	CDS	2107845	2108636	.	+	0	ID=cds2020;Parent=gene2273;Dbxref=Genbank:YP_403891.1,GeneID:3795622;Name=YP_403891.1;Note=part of the ABC type transport system for alkanesulfonate SsuABC%3B SsuB the ATP-binding subunit and SsuC the permease;gbkey=CDS;gene=ssuC;product=alkanesulfonate transporter permease;protein_id=YP_403891.1;transl_table=11
NC_007606.1	RefSeq	gene	2108633	2109384	.	+	.	ID=gene2274;Dbxref=GeneID:3795623;Name=ycbE;Note=SDY2324;gbkey=Gene;gene=ycbE;gene_biotype=pseudogene;locus_tag=SDY_2324;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2109427	2112039	.	-	.	ID=gene2275;Dbxref=GeneID:3795624;Name=pepN;Note=SDY2325;gbkey=Gene;gene=pepN;gene_biotype=protein_coding;locus_tag=SDY_2325
NC_007606.1	RefSeq	CDS	2109427	2112039	.	-	0	ID=cds2021;Parent=gene2275;Dbxref=Genbank:YP_403893.1,GeneID:3795624;Name=YP_403893.1;Note=Code: E%3B COG: COG0308;gbkey=CDS;gene=pepN;product=aminopeptidase;protein_id=YP_403893.1;transl_table=11
NC_007606.1	RefSeq	gene	2112305	2113507	.	+	.	ID=gene2276;Dbxref=GeneID:3795625;Name=pncB;Note=SDY2326;gbkey=Gene;gene=pncB;gene_biotype=protein_coding;locus_tag=SDY_2326
NC_007606.1	RefSeq	CDS	2112305	2113507	.	+	0	ID=cds2022;Parent=gene2276;Dbxref=Genbank:YP_403894.1,GeneID:3795625;Name=YP_403894.1;Note=catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate;gbkey=CDS;gene=pncB;product=nicotinate phosphoribosyltransferase;protein_id=YP_403894.1;transl_table=11
NC_007606.1	RefSeq	gene	2113677	2115077	.	+	.	ID=gene2277;Dbxref=GeneID:3795626;Name=asnC;Note=SDY2327;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=SDY_2327
NC_007606.1	RefSeq	CDS	2113677	2115077	.	+	0	ID=cds2023;Parent=gene2277;Dbxref=Genbank:YP_403895.1,GeneID:3795626;Name=YP_403895.1;Note=''catalyzes a two-step reaction%2C first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA'';gbkey=CDS;gene=asnC;product=asparaginyl-tRNA synthetase;protein_id=YP_403895.1;transl_table=11
NC_007606.1	RefSeq	gene	2115680	2116768	.	+	.	ID=gene2278;Dbxref=GeneID:3795627;Name=ompF;Note=SDY2328;gbkey=Gene;gene=ompF;gene_biotype=protein_coding;locus_tag=SDY_2328
NC_007606.1	RefSeq	CDS	2115680	2116768	.	+	0	ID=cds2024;Parent=gene2278;Dbxref=Genbank:YP_403896.1,GeneID:3795627;Name=YP_403896.1;Note=outer membrane porin F%3B 1a%3B Ia%3B b;gbkey=CDS;gene=ompF;product=outer membrane protein F;protein_id=YP_403896.1;transl_table=11
NC_007606.1	RefSeq	gene	2116953	2118143	.	+	.	ID=gene2279;Dbxref=GeneID:3795628;Name=aspC;Note=SDY2329;gbkey=Gene;gene=aspC;gene_biotype=protein_coding;locus_tag=SDY_2329
NC_007606.1	RefSeq	CDS	2116953	2118143	.	+	0	ID=cds2025;Parent=gene2279;Dbxref=Genbank:YP_403897.1,GeneID:3795628;Name=YP_403897.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;gene=aspC;product=aromatic amino acid aminotransferase;protein_id=YP_403897.1;transl_table=11
NC_007606.1	RefSeq	gene	2118193	2118840	.	-	.	ID=gene2280;Dbxref=GeneID:3795629;Name=ycbL;Note=SDY2330;gbkey=Gene;gene=ycbL;gene_biotype=protein_coding;locus_tag=SDY_2330
NC_007606.1	RefSeq	CDS	2118193	2118840	.	-	0	ID=cds2026;Parent=gene2280;Dbxref=Genbank:YP_403898.1,GeneID:3795629;Name=YP_403898.1;Note=Code: R%3B COG: COG0491;gbkey=CDS;gene=ycbL;product=hypothetical protein;protein_id=YP_403898.1;transl_table=11
NC_007606.1	RefSeq	gene	2118867	2119415	.	-	.	ID=gene2281;Dbxref=GeneID:3795630;Name=ycbK;Note=SDY2331;gbkey=Gene;gene=ycbK;gene_biotype=protein_coding;locus_tag=SDY_2331
NC_007606.1	RefSeq	CDS	2118867	2119415	.	-	0	ID=cds2027;Parent=gene2281;Dbxref=Genbank:YP_403899.1,GeneID:3795630;Name=YP_403899.1;Note=Code: S%3B COG: COG3108;gbkey=CDS;gene=ycbK;product=hypothetical protein;protein_id=YP_403899.1;transl_table=11
NC_007606.1	RefSeq	gene	2119596	2121443	.	-	.	ID=gene2282;Dbxref=GeneID:3795631;Name=ycbB;Note=SDY2332;gbkey=Gene;gene=ycbB;gene_biotype=protein_coding;locus_tag=SDY_2332
NC_007606.1	RefSeq	CDS	2119596	2121443	.	-	0	ID=cds2028;Parent=gene2282;Dbxref=Genbank:YP_403900.1,GeneID:3795631;Name=YP_403900.1;Note=Code: S%3B COG: COG2989;gbkey=CDS;gene=ycbB;product=hypothetical protein;protein_id=YP_403900.1;transl_table=11
NC_007606.1	RefSeq	region	2121615	2122387	.	-	.	ID=id397;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2121629	2122024	.	-	.	ID=gene2283;Dbxref=GeneID:3795632;Name=SDY_2333;Note=SDY2333;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2333
NC_007606.1	RefSeq	CDS	2121629	2122024	.	-	0	ID=cds2029;Parent=gene2283;Dbxref=Genbank:YP_403901.1,GeneID:3795632;Name=YP_403901.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403901.1;transl_table=11
NC_007606.1	RefSeq	gene	2122051	2122323	.	-	.	ID=gene2284;Dbxref=GeneID:18263092;Name=SDY_4705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4705
NC_007606.1	RefSeq	CDS	2122051	2122323	.	-	0	ID=cds2030;Parent=gene2284;Dbxref=Genbank:YP_009000778.1,GeneID:18263092;Name=YP_009000778.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000778.1;transl_table=11
NC_007606.1	RefSeq	gene	2122426	2126877	.	-	.	ID=gene2285;Dbxref=GeneID:3795633;Name=mukB;Note=SDY2334;gbkey=Gene;gene=mukB;gene_biotype=protein_coding;locus_tag=SDY_2334
NC_007606.1	RefSeq	CDS	2122426	2126877	.	-	0	ID=cds2031;Parent=gene2285;Dbxref=Genbank:YP_403902.1,GeneID:3795633;Name=YP_403902.1;Note=SMC (structural maintenance of chromosomes) family of proteins%3B involved in chromosome condensatin and partitioning%3B forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ%3B mutations result in cell division defects;gbkey=CDS;gene=mukB;product=cell division protein MukB;protein_id=YP_403902.1;transl_table=11
NC_007606.1	RefSeq	gene	2126877	2127554	.	-	.	ID=gene2286;Dbxref=GeneID:3795634;Name=mukE;Note=SDY2335;gbkey=Gene;gene=mukE;gene_biotype=protein_coding;locus_tag=SDY_2335
NC_007606.1	RefSeq	CDS	2126877	2127554	.	-	0	ID=cds2032;Parent=gene2286;Dbxref=Genbank:YP_403903.1,GeneID:3795634;Name=YP_403903.1;Note=acts with MukB and MukF to condense the chromosome and allow for segregation during cell division;gbkey=CDS;gene=mukE;product=condesin subunit E;protein_id=YP_403903.1;transl_table=11
NC_007606.1	RefSeq	gene	2127562	2128884	.	-	.	ID=gene2287;Dbxref=GeneID:3795425;Name=mukF;Note=SDY2336;gbkey=Gene;gene=mukF;gene_biotype=protein_coding;locus_tag=SDY_2336
NC_007606.1	RefSeq	CDS	2127562	2128884	.	-	0	ID=cds2033;Parent=gene2287;Dbxref=Genbank:YP_403904.1,GeneID:3795425;Name=YP_403904.1;Note=acts with MukB and MukE to condense the chromosome and allow for segregation during cell division;gbkey=CDS;gene=mukF;product=condesin subunit F;protein_id=YP_403904.1;transl_table=11
NC_007606.1	RefSeq	gene	2128881	2129666	.	-	.	ID=gene2288;Dbxref=GeneID:3795426;Name=smtA;Note=SDY2337;gbkey=Gene;gene=smtA;gene_biotype=protein_coding;locus_tag=SDY_2337
NC_007606.1	RefSeq	CDS	2128881	2129666	.	-	0	ID=cds2034;Parent=gene2288;Dbxref=Genbank:YP_403905.1,GeneID:3795426;Name=YP_403905.1;Note=involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens%3B expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc%3B NO elicits release of Zn ions from SmtA;gbkey=CDS;gene=smtA;product=metallothionein SmtA;protein_id=YP_403905.1;transl_table=11
NC_007606.1	RefSeq	gene	2129804	2130583	.	+	.	ID=gene2289;Dbxref=GeneID:3795427;Name=ycbC;Note=SDY2338;gbkey=Gene;gene=ycbC;gene_biotype=protein_coding;locus_tag=SDY_2338
NC_007606.1	RefSeq	CDS	2129804	2130583	.	+	0	ID=cds2035;Parent=gene2289;Dbxref=Genbank:YP_403906.1,GeneID:3795427;Name=YP_403906.1;Note=Code: S%3B COG: COG1434;gbkey=CDS;gene=ycbC;product=hypothetical protein;protein_id=YP_403906.1;transl_table=11
NC_007606.1	RefSeq	gene	2130560	2131453	.	-	.	ID=gene2290;Dbxref=GeneID:3795428;Name=SDY_2339;Note=SDY2339;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2339
NC_007606.1	RefSeq	CDS	2130560	2131453	.	-	0	ID=cds2036;Parent=gene2290;Dbxref=Genbank:YP_403907.1,GeneID:3795428;Name=YP_403907.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403907.1;transl_table=11
NC_007606.1	RefSeq	gene	2131607	2132353	.	-	.	ID=gene2291;Dbxref=GeneID:3795429;Name=kdsB;Note=SDY2340;gbkey=Gene;gene=kdsB;gene_biotype=protein_coding;locus_tag=SDY_2340
NC_007606.1	RefSeq	CDS	2131607	2132353	.	-	0	ID=cds2037;Parent=gene2291;Dbxref=Genbank:YP_403908.1,GeneID:3795429;Name=YP_403908.1;Note=CMP-2-keto-3-deoxyoctulosonic acid synthetase%3B catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS;gbkey=CDS;gene=kdsB;product=3-deoxy-manno-octulosonate cytidylyltransferase;protein_id=YP_403908.1;transl_table=11
NC_007606.1	RefSeq	gene	2132350	2132532	.	-	.	ID=gene2292;Dbxref=GeneID:3795430;Name=ycaR;Note=SDY2341;gbkey=Gene;gene=ycaR;gene_biotype=protein_coding;locus_tag=SDY_2341
NC_007606.1	RefSeq	CDS	2132350	2132532	.	-	0	ID=cds2038;Parent=gene2292;Dbxref=Genbank:YP_403909.1,GeneID:3795430;Name=YP_403909.1;Note=Code: S%3B COG: COG2835;gbkey=CDS;gene=ycaR;product=hypothetical protein;protein_id=YP_403909.1;transl_table=11
NC_007606.1	RefSeq	gene	2132584	2133816	.	-	.	ID=gene2293;Dbxref=GeneID:3795431;Name=ycaQ;Note=SDY2342;gbkey=Gene;gene=ycaQ;gene_biotype=protein_coding;locus_tag=SDY_2342
NC_007606.1	RefSeq	CDS	2132584	2133816	.	-	0	ID=cds2039;Parent=gene2293;Dbxref=Genbank:YP_403910.1,GeneID:3795431;Name=YP_403910.1;Note=Code: S%3B COG: COG3214;gbkey=CDS;gene=ycaQ;product=hypothetical protein;protein_id=YP_403910.1;transl_table=11
NC_007606.1	RefSeq	gene	2133853	2134839	.	-	.	ID=gene2294;Dbxref=GeneID:3795432;Name=lpxK;Note=SDY2343;gbkey=Gene;gene=lpxK;gene_biotype=protein_coding;locus_tag=SDY_2343
NC_007606.1	RefSeq	CDS	2133853	2134839	.	-	0	ID=cds2040;Parent=gene2294;Dbxref=Genbank:YP_403911.1,GeneID:3795432;Name=YP_403911.1;Note=''transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1%2C4'-bis-phosphate'';gbkey=CDS;gene=lpxK;product=tetraacyldisaccharide 4'-kinase;protein_id=YP_403911.1;transl_table=11
NC_007606.1	RefSeq	gene	2134836	2136584	.	-	.	ID=gene2295;Dbxref=GeneID:3795433;Name=msbA;Note=SDY2344;gbkey=Gene;gene=msbA;gene_biotype=protein_coding;locus_tag=SDY_2344
NC_007606.1	RefSeq	CDS	2134836	2136584	.	-	0	ID=cds2041;Parent=gene2295;Dbxref=Genbank:YP_403912.1,GeneID:3795433;Name=YP_403912.1;Note=involved in the transport of lipid A across the inner membrane;gbkey=CDS;gene=msbA;product=lipid transporter ATP-binding/permease;protein_id=YP_403912.1;transl_table=11
NC_007606.1	RefSeq	gene	2136621	2138885	.	-	.	ID=gene2296;Dbxref=GeneID:3795434;Name=ycaI;Note=SDY2345;gbkey=Gene;gene=ycaI;gene_biotype=protein_coding;locus_tag=SDY_2345
NC_007606.1	RefSeq	CDS	2136621	2138885	.	-	0	ID=cds2042;Parent=gene2296;Dbxref=Genbank:YP_403913.2,GeneID:3795434;Name=YP_403913.2;Note=Code: R%3B COG: COG0658;gbkey=CDS;gene=ycaI;product=hypothetical protein;protein_id=YP_403913.2;transl_table=11
NC_007606.1	RefSeq	gene	2139092	2139376	.	-	.	ID=gene2297;Dbxref=GeneID:3795435;Name=ihfB;Note=SDY2346;gbkey=Gene;gene=ihfB;gene_biotype=protein_coding;locus_tag=SDY_2346
NC_007606.1	RefSeq	CDS	2139092	2139376	.	-	0	ID=cds2043;Parent=gene2297;Dbxref=Genbank:YP_403914.1,GeneID:3795435;Name=YP_403914.1;Note=''This protein is one of the two subunits of integration host factor%2C a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control'';gbkey=CDS;gene=ihfB;product=integration host factor subunit beta;protein_id=YP_403914.1;transl_table=11
NC_007606.1	RefSeq	gene	2139536	2141209	.	-	.	ID=gene2298;Dbxref=GeneID:3795436;Name=rpsA;Note=SDY2347;gbkey=Gene;gene=rpsA;gene_biotype=protein_coding;locus_tag=SDY_2347
NC_007606.1	RefSeq	CDS	2139536	2141209	.	-	0	ID=cds2044;Parent=gene2298;Dbxref=Genbank:YP_403915.1,GeneID:3795436;Name=YP_403915.1;Note=in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit%3B autoregulates expression via a C-terminal domain%3B in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats%3B the S1 nucleic acid-binding domain is found associated with other proteins;gbkey=CDS;gene=rpsA;product=30S ribosomal protein S1;protein_id=YP_403915.1;transl_table=11
NC_007606.1	RefSeq	gene	2141320	2142003	.	-	.	ID=gene2299;Dbxref=GeneID:3795437;Name=cmk;Note=SDY2348;gbkey=Gene;gene=cmk;gene_biotype=protein_coding;locus_tag=SDY_2348
NC_007606.1	RefSeq	CDS	2141320	2142003	.	-	0	ID=cds2045;Parent=gene2299;Dbxref=Genbank:YP_403916.1,GeneID:3795437;Name=YP_403916.1;Note=Catalyzes the formation of (d)CDP from ATP and (d)CMP;gbkey=CDS;gene=cmk;product=cytidylate kinase;protein_id=YP_403916.1;transl_table=11
NC_007606.1	RefSeq	gene	2142176	2142940	.	-	.	ID=gene2300;Dbxref=GeneID:3795438;Name=ycaL;Note=SDY2349;gbkey=Gene;gene=ycaL;gene_biotype=protein_coding;locus_tag=SDY_2349
NC_007606.1	RefSeq	CDS	2142176	2142940	.	-	0	ID=cds2046;Parent=gene2300;Dbxref=Genbank:YP_403917.1,GeneID:3795438;Name=YP_403917.1;Note=Code: O%3B COG: COG0501;gbkey=CDS;gene=ycaL;product=heat shock protein;protein_id=YP_403917.1;transl_table=11
NC_007606.1	RefSeq	region	2142948	2144278	.	+	.	ID=id398;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2142994	2143404	.	+	.	ID=gene2301;Dbxref=GeneID:3795439;Name=SDY_2350;Note=SDY2350;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2350
NC_007606.1	RefSeq	CDS	2142994	2143404	.	+	0	ID=cds2047;Parent=gene2301;Dbxref=Genbank:YP_403918.1,GeneID:3795439;Name=YP_403918.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_403918.1;transl_table=11
NC_007606.1	RefSeq	gene	2143362	2144267	.	+	.	ID=gene2302;Dbxref=GeneID:3795440;Name=SDY_2351;Note=SDY2351;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2351
NC_007606.1	RefSeq	CDS	2143362	2144267	.	+	0	ID=cds2048;Parent=gene2302;Dbxref=Genbank:YP_403919.2,GeneID:3795440;Name=YP_403919.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_403919.2;transl_table=11
NC_007606.1	RefSeq	region	2144398	2145825	.	+	.	ID=id399;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2144465	2145811	.	+	.	ID=gene2303;Dbxref=GeneID:3795441;Name=SDY_2352;Note=SDY2352;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2352
NC_007606.1	RefSeq	CDS	2144465	2145811	.	+	0	ID=cds2049;Parent=gene2303;Dbxref=Genbank:YP_403920.1,GeneID:3795441;Name=YP_403920.1;Note=Code: L%3B COG: COG3385;gbkey=CDS;product=insertion sequence element IS4 transposase InsG;protein_id=YP_403920.1;transl_table=11
NC_007606.1	RefSeq	gene	2145893	2147167	.	-	.	ID=gene2304;Dbxref=GeneID:3795442;Name=aroA;Note=SDY2353;gbkey=Gene;gene=aroA;gene_biotype=protein_coding;locus_tag=SDY_2353
NC_007606.1	RefSeq	CDS	2145893	2147167	.	-	0	ID=cds2050;Parent=gene2304;Dbxref=Genbank:YP_403921.1,GeneID:3795442;Name=YP_403921.1;Note=catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis;gbkey=CDS;gene=aroA;product=3-phosphoshikimate 1-carboxyvinyltransferase;protein_id=YP_403921.1;transl_table=11
NC_007606.1	RefSeq	gene	2147238	2148326	.	-	.	ID=gene2305;Dbxref=GeneID:3795443;Name=serC;Note=SDY2354;gbkey=Gene;gene=serC;gene_biotype=protein_coding;locus_tag=SDY_2354
NC_007606.1	RefSeq	CDS	2147238	2148326	.	-	0	ID=cds2051;Parent=gene2305;Dbxref=Genbank:YP_403922.1,GeneID:3795443;Name=YP_403922.1;Note=catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate%3B required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine;gbkey=CDS;gene=serC;product=phosphoserine aminotransferase;protein_id=YP_403922.1;transl_table=11
NC_007606.1	RefSeq	gene	2148525	2149217	.	-	.	ID=gene2306;Dbxref=GeneID:3795444;Name=ycaP;Note=SDY2355;gbkey=Gene;gene=ycaP;gene_biotype=protein_coding;locus_tag=SDY_2355
NC_007606.1	RefSeq	CDS	2148525	2149217	.	-	0	ID=cds2052;Parent=gene2306;Dbxref=Genbank:YP_403923.1,GeneID:3795444;Name=YP_403923.1;Note=Code: S%3B COG: COG2323;gbkey=CDS;gene=ycaP;product=hypothetical protein;protein_id=YP_403923.1;transl_table=11
NC_007606.1	RefSeq	gene	2149347	2151107	.	+	.	ID=gene2307;Dbxref=GeneID:3795964;Name=ycaO;Note=SDY2356;gbkey=Gene;gene=ycaO;gene_biotype=pseudogene;locus_tag=SDY_2356;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2151514	2152371	.	+	.	ID=gene2308;Dbxref=GeneID:3795965;Name=focA;Note=SDY2357;gbkey=Gene;gene=focA;gene_biotype=protein_coding;locus_tag=SDY_2357
NC_007606.1	RefSeq	CDS	2151514	2152371	.	+	0	ID=cds2053;Parent=gene2308;Dbxref=Genbank:YP_403925.1,GeneID:3795965;Name=YP_403925.1;Note=Code: P%3B COG: COG2116;gbkey=CDS;gene=focA;product=formate transporter;protein_id=YP_403925.1;transl_table=11
NC_007606.1	RefSeq	gene	2152426	2154708	.	+	.	ID=gene2309;Dbxref=GeneID:3795966;Name=pflB;Note=SDY2358;gbkey=Gene;gene=pflB;gene_biotype=protein_coding;locus_tag=SDY_2358
NC_007606.1	RefSeq	CDS	2152426	2154708	.	+	0	ID=cds2054;Parent=gene2309;Dbxref=Genbank:YP_403926.1,GeneID:3795966;Name=YP_403926.1;Note=Code: C%3B COG: COG1882;gbkey=CDS;gene=pflB;product=formate acetyltransferase 1;protein_id=YP_403926.1;transl_table=11
NC_007606.1	RefSeq	gene	2154900	2155640	.	+	.	ID=gene2310;Dbxref=GeneID:3795967;Name=pflA;Note=SDY2359;gbkey=Gene;gene=pflA;gene_biotype=protein_coding;locus_tag=SDY_2359
NC_007606.1	RefSeq	CDS	2154900	2155640	.	+	0	ID=cds2055;Parent=gene2310;Dbxref=Genbank:YP_403927.1,GeneID:3795967;Name=YP_403927.1;Note=activates pyruvate formate-lyase 1 under anaerobic conditions;gbkey=CDS;gene=pflA;product=pyruvate formate lyase-activating enzyme;protein_id=YP_403927.1;transl_table=11
NC_007606.1	RefSeq	gene	2155850	2159515	.	-	.	ID=gene2311;Dbxref=GeneID:3795970;Name=SDY_2362;Note=SDY2362%3B contains IS600 insertion%3B original product:  transport;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2362;pseudo=true
NC_007606.1	RefSeq	region	2156156	2156922	.	+	.	ID=id400;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2156213	2156485	.	+	.	ID=gene2312;Dbxref=GeneID:18263093;Name=SDY_4706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4706
NC_007606.1	RefSeq	CDS	2156213	2156485	.	+	0	ID=cds2056;Parent=gene2312;Dbxref=Genbank:YP_009000779.1,GeneID:18263093;Name=YP_009000779.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000779.1;transl_table=11
NC_007606.1	RefSeq	gene	2156512	2156907	.	+	.	ID=gene2313;Dbxref=GeneID:3795968;Name=SDY_2360;Note=SDY2360;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2360
NC_007606.1	RefSeq	CDS	2156512	2156907	.	+	0	ID=cds2057;Parent=gene2313;Dbxref=Genbank:YP_403928.2,GeneID:3795968;Name=YP_403928.2;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403928.2;transl_table=11
NC_007606.1	RefSeq	region	2157842	2159107	.	-	.	ID=id401;Dbxref=GeneID:3795970;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2158741	2159043	.	-	.	ID=gene2314;Dbxref=GeneID:3795969;Name=SDY_2361;Note=SDY2361;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2361
NC_007606.1	RefSeq	CDS	2158741	2159043	.	-	0	ID=cds2058;Parent=gene2314;Dbxref=Genbank:YP_403929.1,GeneID:3795969;Name=YP_403929.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403929.1;transl_table=11
NC_007606.1	RefSeq	gene	2159533	2160681	.	-	.	ID=gene2315;Dbxref=GeneID:3795971;Name=ycaD;Note=SDY2363;gbkey=Gene;gene=ycaD;gene_biotype=protein_coding;locus_tag=SDY_2363
NC_007606.1	RefSeq	CDS	2159533	2160681	.	-	0	ID=cds2059;Parent=gene2315;Dbxref=Genbank:YP_403930.1,GeneID:3795971;Name=YP_403930.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=ycaD;product=MFS family transporter protein;protein_id=YP_403930.1;transl_table=11
NC_007606.1	RefSeq	gene	2160996	2161622	.	+	.	ID=gene2316;Dbxref=GeneID:3795972;Name=ycaC;Note=SDY2364;gbkey=Gene;gene=ycaC;gene_biotype=pseudogene;locus_tag=SDY_2364;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2161658	2162521	.	-	.	ID=gene2317;Dbxref=GeneID:3795973;Name=dmsC;Note=SDY2365;gbkey=Gene;gene=dmsC;gene_biotype=protein_coding;locus_tag=SDY_2365
NC_007606.1	RefSeq	CDS	2161658	2162521	.	-	0	ID=cds2060;Parent=gene2317;Dbxref=Genbank:YP_403932.1,GeneID:3795973;Name=YP_403932.1;Note=Code: R%3B COG: COG3302;gbkey=CDS;gene=dmsC;product=anaerobic dimethyl sulfoxide reductase subunit C;protein_id=YP_403932.1;transl_table=11
NC_007606.1	RefSeq	gene	2162523	2163139	.	-	.	ID=gene2318;Dbxref=GeneID:3795974;Name=dmsB;Note=SDY2366%3B contains in-frame stop codon%3B original product: anaerobic dimethyl sulfoxide reductase subunit B;gbkey=Gene;gene=dmsB;gene_biotype=pseudogene;locus_tag=SDY_2366;pseudo=true
NC_007606.1	RefSeq	gene	2163150	2165507	.	-	.	ID=gene2319;Dbxref=GeneID:3795975;Name=dmsA;Note=SDY2367;gbkey=Gene;gene=dmsA;gene_biotype=protein_coding;locus_tag=SDY_2367
NC_007606.1	RefSeq	CDS	2163150	2165507	.	-	0	ID=cds2061;Parent=gene2319;Dbxref=Genbank:YP_403933.1,GeneID:3795975;Name=YP_403933.1;Note=Code: C%3B COG: COG0243;gbkey=CDS;gene=dmsA;product=anaerobic dimethyl sulfoxide reductase subunit A;protein_id=YP_403933.1;transl_table=11
NC_007606.1	RefSeq	gene	2165833	2167125	.	-	.	ID=gene2320;Dbxref=GeneID:3795976;Name=serS;Note=SDY2368;gbkey=Gene;gene=serS;gene_biotype=protein_coding;locus_tag=SDY_2368
NC_007606.1	RefSeq	CDS	2165833	2167125	.	-	0	ID=cds2062;Parent=gene2320;Dbxref=Genbank:YP_403934.1,GeneID:3795976;Name=YP_403934.1;Note=''catalyzes a two-step reaction%2C first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA'';gbkey=CDS;gene=serS;product=seryl-tRNA synthetase;protein_id=YP_403934.1;transl_table=11
NC_007606.1	RefSeq	gene	2167216	2168559	.	-	.	ID=gene2321;Dbxref=GeneID:3795977;Name=ycaJ;Note=SDY2369;gbkey=Gene;gene=ycaJ;gene_biotype=protein_coding;locus_tag=SDY_2369
NC_007606.1	RefSeq	CDS	2167216	2168559	.	-	0	ID=cds2063;Parent=gene2321;Dbxref=Genbank:YP_403935.1,GeneID:3795977;Name=YP_403935.1;Note=Code: L%3B COG: COG2256;gbkey=CDS;gene=ycaJ;product=recombination factor protein RarA;protein_id=YP_403935.1;transl_table=11
NC_007606.1	RefSeq	gene	2168570	2169184	.	-	.	ID=gene2322;Dbxref=GeneID:3795978;Name=lolA;Note=SDY2370;gbkey=Gene;gene=lolA;gene_biotype=protein_coding;locus_tag=SDY_2370
NC_007606.1	RefSeq	CDS	2168570	2169184	.	-	0	ID=cds2064;Parent=gene2322;Dbxref=Genbank:YP_403936.1,GeneID:3795978;Name=YP_403936.1;Note=participates with LolB in the incorporation of lipoprotein into the outer membrane;gbkey=CDS;gene=lolA;product=outer-membrane lipoprotein carrier protein;protein_id=YP_403936.1;transl_table=11
NC_007606.1	RefSeq	gene	2169336	2173442	.	-	.	ID=gene2323;Dbxref=GeneID:3795979;Name=ftsK;Note=SDY2371;gbkey=Gene;gene=ftsK;gene_biotype=protein_coding;locus_tag=SDY_2371
NC_007606.1	RefSeq	CDS	2169336	2173442	.	-	0	ID=cds2065;Parent=gene2323;Dbxref=Genbank:YP_403937.1,GeneID:3795979;Name=YP_403937.1;Note=DNA-binding membrane protein required for chromosome resolution and partitioning;gbkey=CDS;gene=ftsK;product=DNA translocase FtsK;protein_id=YP_403937.1;transl_table=11
NC_007606.1	RefSeq	gene	2173577	2174071	.	-	.	ID=gene2324;Dbxref=GeneID:3795980;Name=lrp;Note=SDY2372;gbkey=Gene;gene=lrp;gene_biotype=protein_coding;locus_tag=SDY_2372
NC_007606.1	RefSeq	CDS	2173577	2174071	.	-	0	ID=cds2066;Parent=gene2324;Dbxref=Genbank:YP_403938.1,GeneID:3795980;Name=YP_403938.1;Note=mediates a global response to leucine%3B acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system;gbkey=CDS;gene=lrp;product=leucine-responsive transcriptional regulator;protein_id=YP_403938.1;transl_table=11
NC_007606.1	RefSeq	gene	2174616	2175581	.	+	.	ID=gene2325;Dbxref=GeneID:3795981;Name=trxB;Note=SDY2373;gbkey=Gene;gene=trxB;gene_biotype=protein_coding;locus_tag=SDY_2373
NC_007606.1	RefSeq	CDS	2174616	2175581	.	+	0	ID=cds2067;Parent=gene2325;Dbxref=Genbank:YP_403939.1,GeneID:3795981;Name=YP_403939.1;Note=catalyzes the transfer of electrons from NADPH to thioredoxin%3B FAD/NAD(P) binding;gbkey=CDS;gene=trxB;product=thioredoxin reductase;protein_id=YP_403939.1;transl_table=11
NC_007606.1	RefSeq	gene	2175704	2177470	.	+	.	ID=gene2326;Dbxref=GeneID:3795982;Name=cydD;Note=SDY2374;gbkey=Gene;gene=cydD;gene_biotype=protein_coding;locus_tag=SDY_2374
NC_007606.1	RefSeq	CDS	2175704	2177470	.	+	0	ID=cds2068;Parent=gene2326;Dbxref=Genbank:YP_403940.1,GeneID:3795982;Name=YP_403940.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;gene=cydD;product=cysteine/glutathione ABC transporter membrane/ATP-binding protein;protein_id=YP_403940.1;transl_table=11
NC_007606.1	RefSeq	gene	2177471	2179192	.	+	.	ID=gene2327;Dbxref=GeneID:3798901;Name=cydC;Note=SDY2375;gbkey=Gene;gene=cydC;gene_biotype=protein_coding;locus_tag=SDY_2375
NC_007606.1	RefSeq	CDS	2177471	2179192	.	+	0	ID=cds2069;Parent=gene2327;Dbxref=Genbank:YP_403941.1,GeneID:3798901;Name=YP_403941.1;Note=in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance%3B important for cytochrome bd and c;gbkey=CDS;gene=cydC;product=cysteine/glutathione ABC transporter membrane/ATP-binding protein;protein_id=YP_403941.1;transl_table=11
NC_007606.1	RefSeq	gene	2179234	2179938	.	+	.	ID=gene2328;Dbxref=GeneID:3798902;Name=aat;Note=SDY2376;gbkey=Gene;gene=aat;gene_biotype=protein_coding;locus_tag=SDY_2376
NC_007606.1	RefSeq	CDS	2179234	2179938	.	+	0	ID=cds2070;Parent=gene2328;Dbxref=Genbank:YP_403942.1,GeneID:3798902;Name=YP_403942.1;Note=''leucyltransferase%3B phenylalanyltransferse%3B functions in the N-end rule pathway%3B transfers Leu%2C Phe%2C Met%2C from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys'';gbkey=CDS;gene=aat;product=leucyl/phenylalanyl-tRNA--protein transferase;protein_id=YP_403942.1;transl_table=11
NC_007606.1	RefSeq	gene	2180223	2180441	.	+	.	ID=gene2329;Dbxref=GeneID:3798903;Name=infA;Note=SDY2377;gbkey=Gene;gene=infA;gene_biotype=protein_coding;locus_tag=SDY_2377
NC_007606.1	RefSeq	CDS	2180223	2180441	.	+	0	ID=cds2071;Parent=gene2329;Dbxref=Genbank:YP_403943.1,GeneID:3798903;Name=YP_403943.1;Note=''stimulates the activities of the other two initiation factors%2C IF-2 and IF-3'';gbkey=CDS;gene=infA;product=translation initiation factor IF-1;protein_id=YP_403943.1;transl_table=11
NC_007606.1	RefSeq	gene	2180695	2180782	.	+	.	ID=gene2330;Dbxref=GeneID:3798904;Name=SDY_2378;Note=SDY2378;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2378
NC_007606.1	RefSeq	tRNA	2180695	2180782	.	+	.	ID=rna42;Parent=gene2330;Dbxref=GeneID:3798904;codons=5;gbkey=tRNA;product=tRNA-Ser
NC_007606.1	RefSeq	exon	2180695	2180782	.	+	.	ID=id402;Parent=rna42;Dbxref=GeneID:3798904;codons=5;gbkey=tRNA;product=tRNA-Ser
NC_007606.1	RefSeq	gene	2181125	2183401	.	-	.	ID=gene2331;Dbxref=GeneID:3798905;Name=clpA;Note=SDY2379;gbkey=Gene;gene=clpA;gene_biotype=protein_coding;locus_tag=SDY_2379
NC_007606.1	RefSeq	CDS	2181125	2183401	.	-	0	ID=cds2072;Parent=gene2331;Dbxref=Genbank:YP_403944.1,GeneID:3798905;Name=YP_403944.1;Note=ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease%3B directs protease to specific substrates;gbkey=CDS;gene=clpA;product=ATP-dependent Clp protease ATP-binding subunit;protein_id=YP_403944.1;transl_table=11
NC_007606.1	RefSeq	gene	2183431	2183751	.	-	.	ID=gene2332;Dbxref=GeneID:3798906;Name=clpS;Note=SDY2380;gbkey=Gene;gene=clpS;gene_biotype=protein_coding;locus_tag=SDY_2380
NC_007606.1	RefSeq	CDS	2183431	2183751	.	-	0	ID=cds2073;Parent=gene2332;Dbxref=Genbank:YP_403945.1,GeneID:3798906;Name=YP_403945.1;Note=involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation%3B binds to the N-terminal domain of the chaperone ClpA;gbkey=CDS;gene=clpS;product=ATP-dependent Clp protease adaptor protein ClpS;protein_id=YP_403945.1;transl_table=11
NC_007606.1	RefSeq	gene	2184074	2184298	.	+	.	ID=gene2333;Dbxref=GeneID:3798907;Name=cspD;Note=SDY2381;gbkey=Gene;gene=cspD;gene_biotype=protein_coding;locus_tag=SDY_2381
NC_007606.1	RefSeq	CDS	2184074	2184298	.	+	0	ID=cds2074;Parent=gene2333;Dbxref=Genbank:YP_403946.1,GeneID:3798907;Name=YP_403946.1;Note=inhibits DNA replication at both initiation and elongation steps%3B stationary phase and starvation inducible;gbkey=CDS;gene=cspD;product=stationary phase/starvation inducible regulatory protein CspD;protein_id=YP_403946.1;transl_table=11
NC_007606.1	RefSeq	gene	2184371	2186323	.	-	.	ID=gene2334;Dbxref=GeneID:3798908;Name=ybjZ;Note=SDY2382;gbkey=Gene;gene=ybjZ;gene_biotype=protein_coding;locus_tag=SDY_2382
NC_007606.1	RefSeq	CDS	2184371	2186323	.	-	0	ID=cds2075;Parent=gene2334;Dbxref=Genbank:YP_403947.1,GeneID:3798908;Name=YP_403947.1;Note=with MacA is involved in the export of macrolide;gbkey=CDS;gene=ybjZ;product=macrolide transporter ATP-binding /permease;protein_id=YP_403947.1;transl_table=11
NC_007606.1	RefSeq	gene	2186320	2187369	.	-	.	ID=gene2335;Dbxref=GeneID:3798909;Name=SDY_2383;Note=SDY2383;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2383
NC_007606.1	RefSeq	CDS	2186320	2187369	.	-	0	ID=cds2076;Parent=gene2335;Dbxref=Genbank:YP_403948.2,GeneID:3798909;Name=YP_403948.2;Note=confers macrolide resistance via active drug efflux;gbkey=CDS;product=macrolide transporter subunit MacA;protein_id=YP_403948.2;transl_table=11
NC_007606.1	RefSeq	gene	2187484	2188476	.	+	.	ID=gene2336;Dbxref=GeneID:3798910;Name=ybjX;Note=SDY2384;gbkey=Gene;gene=ybjX;gene_biotype=protein_coding;locus_tag=SDY_2384
NC_007606.1	RefSeq	CDS	2187484	2188476	.	+	0	ID=cds2077;Parent=gene2336;Dbxref=Genbank:YP_403949.1,GeneID:3798910;Name=YP_403949.1;Note=Code: S%3B COG: COG2990;gbkey=CDS;gene=ybjX;product=hypothetical protein;protein_id=YP_403949.1;transl_table=11
NC_007606.1	RefSeq	gene	2188473	2190131	.	-	.	ID=gene2337;Dbxref=GeneID:3798911;Name=ybjD;Note=SDY2385;gbkey=Gene;gene=ybjD;gene_biotype=protein_coding;locus_tag=SDY_2385
NC_007606.1	RefSeq	CDS	2188473	2190131	.	-	0	ID=cds2078;Parent=gene2337;Dbxref=Genbank:YP_403950.1,GeneID:3798911;Name=YP_403950.1;Note=Code: L%3B COG: COG3593;gbkey=CDS;gene=ybjD;product=hypothetical protein;protein_id=YP_403950.1;transl_table=11
NC_007606.1	RefSeq	region	2190289	2191056	.	-	.	ID=id403;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2190304	2190681	.	-	.	ID=gene2338;Dbxref=GeneID:3798912;Name=insB;Note=SDY2386;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2386
NC_007606.1	RefSeq	CDS	2190304	2190681	.	-	0	ID=cds2079;Parent=gene2338;Dbxref=Genbank:YP_403951.1,GeneID:3798912;Name=YP_403951.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_403951.1;transl_table=11
NC_007606.1	RefSeq	gene	2190726	2191001	.	-	.	ID=gene2339;Dbxref=GeneID:3798913;Name=insA;Note=SDY2387;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2387
NC_007606.1	RefSeq	CDS	2190726	2191001	.	-	0	ID=cds2080;Parent=gene2339;Dbxref=Genbank:YP_403952.1,GeneID:3798913;Name=YP_403952.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_403952.1;transl_table=11
NC_007606.1	RefSeq	gene	2191334	2192011	.	+	.	ID=gene2340;Dbxref=GeneID:3798914;Name=aqpZ;Note=SDY2388;gbkey=Gene;gene=aqpZ;gene_biotype=protein_coding;locus_tag=SDY_2388
NC_007606.1	RefSeq	CDS	2191334	2192011	.	+	0	ID=cds2081;Parent=gene2340;Dbxref=Genbank:YP_403953.1,GeneID:3798914;Name=YP_403953.1;Note=porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure;gbkey=CDS;gene=aqpZ;product=aquaporin Z;protein_id=YP_403953.1;transl_table=11
NC_007606.1	RefSeq	gene	2192145	2193044	.	+	.	ID=gene2341;Dbxref=GeneID:3798915;Name=ybjE;Note=SDY2389;gbkey=Gene;gene=ybjE;gene_biotype=protein_coding;locus_tag=SDY_2389
NC_007606.1	RefSeq	CDS	2192145	2193044	.	+	0	ID=cds2082;Parent=gene2341;Dbxref=Genbank:YP_403954.1,GeneID:3798915;Name=YP_403954.1;Note=Code: S%3B COG: COG2431;gbkey=CDS;gene=ybjE;product=surface protein;protein_id=YP_403954.1;transl_table=11
NC_007606.1	RefSeq	gene	2193188	2194840	.	+	.	ID=gene2342;Dbxref=GeneID:3798916;Name=ybjW;Note=SDY2390;gbkey=Gene;gene=ybjW;gene_biotype=protein_coding;locus_tag=SDY_2390
NC_007606.1	RefSeq	CDS	2193188	2194840	.	+	0	ID=cds2083;Parent=gene2342;Dbxref=Genbank:YP_403955.2,GeneID:3798916;Name=YP_403955.2;Note=catalyzes the reduction of hydroxylamine to ammonia and water;gbkey=CDS;gene=ybjW;product=hydroxylamine reductase;protein_id=YP_403955.2;transl_table=11
NC_007606.1	RefSeq	gene	2194852	2195820	.	+	.	ID=gene2343;Dbxref=GeneID:3798917;Name=SDY_2391;Note=SDY2391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2391
NC_007606.1	RefSeq	CDS	2194852	2195820	.	+	0	ID=cds2084;Parent=gene2343;Dbxref=Genbank:YP_403956.1,GeneID:3798917;Name=YP_403956.1;Note=Code: C%3B COG: COG1018;gbkey=CDS;product=HCP oxidoreductase;protein_id=YP_403956.1;transl_table=11
NC_007606.1	RefSeq	gene	2195953	2197671	.	+	.	ID=gene2344;Dbxref=GeneID:3798918;Name=poxB;Note=SDY2392;gbkey=Gene;gene=poxB;gene_biotype=protein_coding;locus_tag=SDY_2392
NC_007606.1	RefSeq	CDS	2195953	2197671	.	+	0	ID=cds2085;Parent=gene2344;Dbxref=Genbank:YP_403957.1,GeneID:3798918;Name=YP_403957.1;Note=catalyzes the formation of acetate from pyruvate;gbkey=CDS;gene=poxB;product=pyruvate dehydrogenase;protein_id=YP_403957.1;transl_table=11
NC_007606.1	RefSeq	gene	2197708	2198709	.	+	.	ID=gene2345;Dbxref=GeneID:3798919;Name=ybjU;Note=SDY2393;gbkey=Gene;gene=ybjU;gene_biotype=protein_coding;locus_tag=SDY_2393
NC_007606.1	RefSeq	CDS	2197708	2198709	.	+	0	ID=cds2086;Parent=gene2345;Dbxref=Genbank:YP_403958.1,GeneID:3798919;Name=YP_403958.1;Note=''low- specificity%3B catalyzes the formation of acetaldehyde and glycine from L-threonine%3B acts on L-threonine%2C L-allo-threonine%2C L-threo-phenylserine%2C and L-erythro-phenylserine'';gbkey=CDS;gene=ybjU;product=L-threonine aldolase;protein_id=YP_403958.1;transl_table=11
NC_007606.1	RefSeq	gene	2198720	2200150	.	+	.	ID=gene2346;Dbxref=GeneID:3797969;Name=ybjT;Note=SDY2394;gbkey=Gene;gene=ybjT;gene_biotype=protein_coding;locus_tag=SDY_2394
NC_007606.1	RefSeq	CDS	2198720	2200150	.	+	0	ID=cds2087;Parent=gene2346;Dbxref=Genbank:YP_403959.1,GeneID:3797969;Name=YP_403959.1;Note=Code: MG%3B COG: COG0702;gbkey=CDS;gene=ybjT;product=dTDP-glucose enzyme;protein_id=YP_403959.1;transl_table=11
NC_007606.1	RefSeq	gene	2200213	2201262	.	+	.	ID=gene2347;Dbxref=GeneID:3797970;Name=SDY_2395;Note=SDY2395;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2395
NC_007606.1	RefSeq	CDS	2200213	2201262	.	+	0	ID=cds2088;Parent=gene2347;Dbxref=Genbank:YP_403960.1,GeneID:3797970;Name=YP_403960.1;Note=Code: MG%3B COG: COG0451;gbkey=CDS;product=nucleotide di-P-sugar epimerase or dehydratase;protein_id=YP_403960.1;transl_table=11
NC_007606.1	RefSeq	gene	2201259	2202089	.	-	.	ID=gene2348;Dbxref=GeneID:3797971;Name=SDY_2396;Note=SDY2396;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2396
NC_007606.1	RefSeq	CDS	2201259	2202089	.	-	0	ID=cds2089;Parent=gene2348;Dbxref=Genbank:YP_403961.1,GeneID:3797971;Name=YP_403961.1;Note=Code: V%3B COG: COG3023;gbkey=CDS;product=regulator;protein_id=YP_403961.1;transl_table=11
NC_007606.1	RefSeq	gene	2202086	2202409	.	-	.	ID=gene2349;Dbxref=GeneID:3797972;Name=SDY_2397;Note=SDY2397;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2397
NC_007606.1	RefSeq	CDS	2202086	2202409	.	-	0	ID=cds2090;Parent=gene2349;Dbxref=Genbank:YP_403962.1,GeneID:3797972;Name=YP_403962.1;Note=Code: S%3B COG: COG0393;gbkey=CDS;product=hypothetical protein;protein_id=YP_403962.1;transl_table=11
NC_007606.1	RefSeq	region	2203028	2203795	.	+	.	ID=id404;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2203083	2203358	.	+	.	ID=gene2350;Dbxref=GeneID:3797973;Name=insA;Note=SDY2398;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2398
NC_007606.1	RefSeq	CDS	2203083	2203358	.	+	0	ID=cds2091;Parent=gene2350;Dbxref=Genbank:YP_403963.1,GeneID:3797973;Name=YP_403963.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_403963.1;transl_table=11
NC_007606.1	RefSeq	gene	2203403	2203780	.	+	.	ID=gene2351;Dbxref=GeneID:18263094;Name=SDY_2398a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2398a
NC_007606.1	RefSeq	CDS	2203403	2203780	.	+	0	ID=cds2092;Parent=gene2351;Dbxref=Genbank:YP_009000780.1,GeneID:18263094;Name=YP_009000780.1;gbkey=CDS;product=transposase IS1;protein_id=YP_009000780.1;transl_table=11
NC_007606.1	RefSeq	region	2204319	2205084	.	-	.	ID=id405;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2204333	2204728	.	-	.	ID=gene2352;Dbxref=GeneID:3797975;Name=SDY_2400;Note=SDY2400;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2400
NC_007606.1	RefSeq	CDS	2204333	2204728	.	-	0	ID=cds2093;Parent=gene2352;Dbxref=Genbank:YP_403965.1,GeneID:3797975;Name=YP_403965.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_403965.1;transl_table=11
NC_007606.1	RefSeq	gene	2204755	2205027	.	-	.	ID=gene2353;Dbxref=GeneID:18263095;Name=SDY_4707;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4707
NC_007606.1	RefSeq	CDS	2204755	2205027	.	-	0	ID=cds2094;Parent=gene2353;Dbxref=Genbank:YP_009000781.1,GeneID:18263095;Name=YP_009000781.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000781.1;transl_table=11
NC_007606.1	RefSeq	gene	2205067	2205846	.	-	.	ID=gene2354;Dbxref=GeneID:3797976;Name=SDY_2401;Note=SDY2401;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2401
NC_007606.1	RefSeq	CDS	2205067	2205846	.	-	0	ID=cds2095;Parent=gene2354;Dbxref=Genbank:YP_403966.1,GeneID:3797976;Name=YP_403966.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403966.1;transl_table=11
NC_007606.1	RefSeq	region	2206113	2206883	.	+	.	ID=id406;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2206170	2206442	.	+	.	ID=gene2355;Dbxref=GeneID:18263096;Name=SDY_4708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4708
NC_007606.1	RefSeq	CDS	2206170	2206442	.	+	0	ID=cds2096;Parent=gene2355;Dbxref=Genbank:YP_009000782.1,GeneID:18263096;Name=YP_009000782.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000782.1;transl_table=11
NC_007606.1	RefSeq	gene	2206469	2206864	.	+	.	ID=gene2356;Dbxref=GeneID:3797977;Name=SDY_2402;Note=SDY2402;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2402
NC_007606.1	RefSeq	CDS	2206469	2206864	.	+	0	ID=cds2097;Parent=gene2356;Dbxref=Genbank:YP_403967.1,GeneID:3797977;Name=YP_403967.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_403967.1;transl_table=11
NC_007606.1	RefSeq	gene	2207268	2207785	.	+	.	ID=gene2357;Dbxref=GeneID:3797978;Name=ybjP;Note=SDY2403;gbkey=Gene;gene=ybjP;gene_biotype=pseudogene;locus_tag=SDY_2403;pseudo=true
NC_007606.1	RefSeq	gene	2208003	2208731	.	+	.	ID=gene2358;Dbxref=GeneID:3797979;Name=artP;Note=SDY2404;gbkey=Gene;gene=artP;gene_biotype=protein_coding;locus_tag=SDY_2404
NC_007606.1	RefSeq	CDS	2208003	2208731	.	+	0	ID=cds2098;Parent=gene2358;Dbxref=Genbank:YP_403969.1,GeneID:3797979;Name=YP_403969.1;Note=With ArtMQJI transports arginine across the inner membrane;gbkey=CDS;gene=artP;product=arginine ABC transporter ATP-binding protein;protein_id=YP_403969.1;transl_table=11
NC_007606.1	RefSeq	gene	2208749	2209480	.	+	.	ID=gene2359;Dbxref=GeneID:3797980;Name=artI;Note=SDY2405;gbkey=Gene;gene=artI;gene_biotype=protein_coding;locus_tag=SDY_2405
NC_007606.1	RefSeq	CDS	2208749	2209480	.	+	0	ID=cds2099;Parent=gene2359;Dbxref=Genbank:YP_403970.1,GeneID:3797980;Name=YP_403970.1;Note=Code: ET%3B COG: COG0834;gbkey=CDS;gene=artI;product=arginine ABC transporter substrate-binding protein;protein_id=YP_403970.1;transl_table=11
NC_007606.1	RefSeq	gene	2209487	2210203	.	+	.	ID=gene2360;Dbxref=GeneID:3797981;Name=artQ;Note=SDY2406;gbkey=Gene;gene=artQ;gene_biotype=protein_coding;locus_tag=SDY_2406
NC_007606.1	RefSeq	CDS	2209487	2210203	.	+	0	ID=cds2100;Parent=gene2360;Dbxref=Genbank:YP_403971.1,GeneID:3797981;Name=YP_403971.1;Note=with ArtPMJI transports arginine across the inner membrane;gbkey=CDS;gene=artQ;product=arginine ABC transporter permease ArtQ;protein_id=YP_403971.1;transl_table=11
NC_007606.1	RefSeq	gene	2210203	2210871	.	+	.	ID=gene2361;Dbxref=GeneID:3797982;Name=artM;Note=SDY2407;gbkey=Gene;gene=artM;gene_biotype=protein_coding;locus_tag=SDY_2407
NC_007606.1	RefSeq	CDS	2210203	2210871	.	+	0	ID=cds2101;Parent=gene2361;Dbxref=Genbank:YP_403972.1,GeneID:3797982;Name=YP_403972.1;Note=with ArtPQJI acts to transport arginine across the inner membrane;gbkey=CDS;gene=artM;product=arginine ABC transporter permease ArtM;protein_id=YP_403972.1;transl_table=11
NC_007606.1	RefSeq	gene	2211162	2211488	.	+	.	ID=gene2362;Dbxref=GeneID:3797983;Name=artJ;Note=SDY2408%3B truncated%3B original product: arginine 3rd transport system periplasmic binding protein;gbkey=Gene;gene=artJ;gene_biotype=pseudogene;locus_tag=SDY_2408;pseudo=true
NC_007606.1	RefSeq	region	2211484	2211760	.	-	.	ID=id407;Note=fragment;gbkey=mobile_element;gene=artJ
NC_007606.1	RefSeq	gene	2211710	2212519	.	-	.	ID=gene2363;Dbxref=GeneID:3797985;Name=SDY_2410;Note=SDY2410;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2410
NC_007606.1	RefSeq	CDS	2211710	2212519	.	-	0	ID=cds2102;Parent=gene2363;Dbxref=Genbank:YP_403974.1,GeneID:3797985;Name=YP_403974.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_403974.1;transl_table=11
NC_007606.1	RefSeq	region	2211761	2213026	.	-	.	ID=id408;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2212660	2212962	.	-	.	ID=gene2364;Dbxref=GeneID:3797986;Name=SDY_2411;Note=SDY2411;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2411
NC_007606.1	RefSeq	CDS	2212660	2212962	.	-	0	ID=cds2103;Parent=gene2364;Dbxref=Genbank:YP_403975.1,GeneID:3797986;Name=YP_403975.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403975.1;transl_table=11
NC_007606.1	RefSeq	region	2213027	2213518	.	-	.	ID=id409;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2213189	2213461	.	-	.	ID=gene2365;Dbxref=GeneID:18263097;Name=SDY_4709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4709
NC_007606.1	RefSeq	CDS	2213189	2213461	.	-	0	ID=cds2104;Parent=gene2365;Dbxref=Genbank:YP_009000783.1,GeneID:18263097;Name=YP_009000783.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000783.1;transl_table=11
NC_007606.1	RefSeq	gene	2213696	2214424	.	-	.	ID=gene2366;Dbxref=GeneID:3797408;Name=SDY_2414;Note=SDY2414;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2414
NC_007606.1	RefSeq	CDS	2213696	2214424	.	-	0	ID=cds2105;Parent=gene2366;Dbxref=Genbank:YP_403978.1,GeneID:3797408;Name=YP_403978.1;Note=Code: S%3B COG: COG3645;gbkey=CDS;product=DNA-binding protein Roi of bacteriophage BP-933W;protein_id=YP_403978.1;transl_table=11
NC_007606.1	RefSeq	gene	2214493	2215170	.	-	.	ID=gene2367;Dbxref=GeneID:3797409;Name=SDY_2415;Note=SDY2415;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2415
NC_007606.1	RefSeq	CDS	2214493	2215170	.	-	0	ID=cds2106;Parent=gene2367;Dbxref=Genbank:YP_403979.2,GeneID:3797409;Name=YP_403979.2;Note=Code: K%3B COG: COG3561;gbkey=CDS;product=antirepressor protein;protein_id=YP_403979.2;transl_table=11
NC_007606.1	RefSeq	gene	2215810	2216118	.	+	.	ID=gene2368;Dbxref=GeneID:3797410;Name=SDY_2416;Note=SDY2416;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2416
NC_007606.1	RefSeq	CDS	2215810	2216118	.	+	0	ID=cds2107;Parent=gene2368;Dbxref=Genbank:YP_403980.1,GeneID:3797410;Name=YP_403980.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403980.1;transl_table=11
NC_007606.1	RefSeq	gene	2216333	2216743	.	-	.	ID=gene2369;Dbxref=GeneID:3797411;Name=ninB;Note=SDY2417;gbkey=Gene;gene=ninB;gene_biotype=protein_coding;locus_tag=SDY_2417
NC_007606.1	RefSeq	CDS	2216333	2216743	.	-	0	ID=cds2108;Parent=gene2369;Dbxref=Genbank:YP_403981.1,GeneID:3797411;Name=YP_403981.1;gbkey=CDS;gene=ninB;product=recombination protein;protein_id=YP_403981.1;transl_table=11
NC_007606.1	RefSeq	gene	2216796	2217584	.	-	.	ID=gene2370;Dbxref=GeneID:3797412;Name=SDY_2418;Note=SDY2418;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2418
NC_007606.1	RefSeq	CDS	2216796	2217584	.	-	0	ID=cds2109;Parent=gene2370;Dbxref=Genbank:YP_403982.1,GeneID:3797412;Name=YP_403982.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_403982.1;transl_table=11
NC_007606.1	RefSeq	region	2216826	2218091	.	-	.	ID=id410;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2217725	2218027	.	-	.	ID=gene2371;Dbxref=GeneID:3797413;Name=SDY_2419;Note=SDY2419;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2419
NC_007606.1	RefSeq	CDS	2217725	2218027	.	-	0	ID=cds2110;Parent=gene2371;Dbxref=Genbank:YP_403983.1,GeneID:3797413;Name=YP_403983.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_403983.1;transl_table=11
NC_007606.1	RefSeq	gene	2218110	2219165	.	+	.	ID=gene2372;Dbxref=GeneID:3797414;Name=SDY_2420;Note=SDY2420;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2420
NC_007606.1	RefSeq	CDS	2218110	2219165	.	+	0	ID=cds2111;Parent=gene2372;Dbxref=Genbank:YP_403984.1,GeneID:3797414;Name=YP_403984.1;Note=Code: L%3B COG: COG0582;gbkey=CDS;product=integrase;protein_id=YP_403984.1;transl_table=11
NC_007606.1	RefSeq	gene	2219223	2219783	.	-	.	ID=gene2373;Dbxref=GeneID:3797415;Name=SDY_2421;Note=SDY2421;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2421
NC_007606.1	RefSeq	CDS	2219223	2219783	.	-	0	ID=cds2112;Parent=gene2373;Dbxref=Genbank:YP_403985.1,GeneID:3797415;Name=YP_403985.1;Note=Code: S%3B COG: COG3234;gbkey=CDS;product=hypothetical protein;protein_id=YP_403985.1;transl_table=11
NC_007606.1	RefSeq	gene	2219780	2220256	.	-	.	ID=gene2374;Dbxref=GeneID:3797416;Name=SDY_2422;Note=SDY2422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2422
NC_007606.1	RefSeq	CDS	2219780	2220256	.	-	0	ID=cds2113;Parent=gene2374;Dbxref=Genbank:YP_403986.1,GeneID:3797416;Name=YP_403986.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_403986.1;transl_table=11
NC_007606.1	RefSeq	gene	2220357	2222984	.	-	.	ID=gene2375;Dbxref=GeneID:3797417;Name=gyrA;Note=SDY2423;gbkey=Gene;gene=gyrA;gene_biotype=protein_coding;locus_tag=SDY_2423
NC_007606.1	RefSeq	CDS	2220357	2222984	.	-	0	ID=cds2114;Parent=gene2375;Dbxref=Genbank:YP_403987.1,GeneID:3797417;Name=YP_403987.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrA;product=DNA gyrase subunit A;protein_id=YP_403987.1;transl_table=11
NC_007606.1	RefSeq	gene	2223131	2223853	.	+	.	ID=gene2376;Dbxref=GeneID:3797418;Name=ubiG;Note=SDY2424;gbkey=Gene;gene=ubiG;gene_biotype=protein_coding;locus_tag=SDY_2424
NC_007606.1	RefSeq	CDS	2223131	2223853	.	+	0	ID=cds2115;Parent=gene2376;Dbxref=Genbank:YP_403988.1,GeneID:3797418;Name=YP_403988.1;Note=Involved in ubiquinone biosynthesis;gbkey=CDS;gene=ubiG;product=3-demethylubiquinone-9 3-methyltransferase;protein_id=YP_403988.1;transl_table=11
NC_007606.1	RefSeq	gene	2223994	2227746	.	-	.	ID=gene2377;Dbxref=GeneID:3797419;Name=SDY_2425;Note=SDY2425;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2425;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2228442	2230727	.	+	.	ID=gene2378;Dbxref=GeneID:3797422;Name=nrdA;Note=SDY2428;gbkey=Gene;gene=nrdA;gene_biotype=protein_coding;locus_tag=SDY_2428
NC_007606.1	RefSeq	CDS	2228442	2230727	.	+	0	ID=cds2116;Parent=gene2378;Dbxref=Genbank:YP_403992.1,GeneID:3797422;Name=YP_403992.1;Note=Catalyzes the rate-limiting step in dNTP synthesis;gbkey=CDS;gene=nrdA;product=ribonucleotide-diphosphate reductase subunit alpha;protein_id=YP_403992.1;transl_table=11
NC_007606.1	RefSeq	gene	2230873	2232003	.	+	.	ID=gene2379;Dbxref=GeneID:3797423;Name=nrdB;Note=SDY2429;gbkey=Gene;gene=nrdB;gene_biotype=protein_coding;locus_tag=SDY_2429
NC_007606.1	RefSeq	CDS	2230873	2232003	.	+	0	ID=cds2117;Parent=gene2379;Dbxref=Genbank:YP_403993.1,GeneID:3797423;Name=YP_403993.1;Note=B2 or R2 protein%3B type 1a enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdA;gbkey=CDS;gene=nrdB;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=YP_403993.1;transl_table=11
NC_007606.1	RefSeq	gene	2232003	2232257	.	+	.	ID=gene2380;Dbxref=GeneID:3797424;Name=yfaE;Note=SDY2430;gbkey=Gene;gene=yfaE;gene_biotype=protein_coding;locus_tag=SDY_2430
NC_007606.1	RefSeq	CDS	2232003	2232257	.	+	0	ID=cds2118;Parent=gene2380;Dbxref=Genbank:YP_403994.1,GeneID:3797424;Name=YP_403994.1;Note=''plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor%2C essential for nucleotide reduction catalyzed by ribonucleotide reductases'';gbkey=CDS;gene=yfaE;product=2Fe-2S ferredoxin;protein_id=YP_403994.1;transl_table=11
NC_007606.1	RefSeq	gene	2232311	2232961	.	-	.	ID=gene2381;Dbxref=GeneID:3797425;Name=SDY_2431;Note=SDY2431;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2431;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2233042	2234232	.	-	.	ID=gene2382;Dbxref=GeneID:3797426;Name=SDY_2432;Note=SDY2432;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2432
NC_007606.1	RefSeq	CDS	2233042	2234232	.	-	0	ID=cds2119;Parent=gene2382;Dbxref=Genbank:YP_403996.1,GeneID:3797426;Name=YP_403996.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;product=antibiotic resistance protein;protein_id=YP_403996.1;transl_table=11
NC_007606.1	RefSeq	gene	2234397	2235268	.	+	.	ID=gene2383;Dbxref=GeneID:3798234;Name=SDY_2433;Note=SDY2433;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2433;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2235313	2236392	.	-	.	ID=gene2384;Dbxref=GeneID:3798235;Name=glpQ;Note=SDY2434;gbkey=Gene;gene=glpQ;gene_biotype=protein_coding;locus_tag=SDY_2434
NC_007606.1	RefSeq	CDS	2235313	2236392	.	-	0	ID=cds2120;Parent=gene2384;Dbxref=Genbank:YP_403998.1,GeneID:3798235;Name=YP_403998.1;Note=hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols%3B periplasmic;gbkey=CDS;gene=glpQ;product=glycerophosphodiester phosphodiesterase;protein_id=YP_403998.1;transl_table=11
NC_007606.1	RefSeq	gene	2236397	2237755	.	-	.	ID=gene2385;Dbxref=GeneID:3798236;Name=glpT;Note=SDY2435;gbkey=Gene;gene=glpT;gene_biotype=protein_coding;locus_tag=SDY_2435
NC_007606.1	RefSeq	CDS	2236397	2237755	.	-	0	ID=cds2121;Parent=gene2385;Dbxref=Genbank:YP_403999.1,GeneID:3798236;Name=YP_403999.1;Note=catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell;gbkey=CDS;gene=glpT;product=sn-glycerol-3-phosphate transporter;protein_id=YP_403999.1;transl_table=11
NC_007606.1	RefSeq	gene	2238028	2239656	.	+	.	ID=gene2386;Dbxref=GeneID:3798237;Name=glpA;Note=SDY2436;gbkey=Gene;gene=glpA;gene_biotype=protein_coding;locus_tag=SDY_2436
NC_007606.1	RefSeq	CDS	2238028	2239656	.	+	0	ID=cds2122;Parent=gene2386;Dbxref=Genbank:YP_404000.1,GeneID:3798237;Name=YP_404000.1;Note=''anaerobic%2C catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor'';gbkey=CDS;gene=glpA;product=sn-glycerol-3-phosphate dehydrogenase subunit A;protein_id=YP_404000.1;transl_table=11
NC_007606.1	RefSeq	gene	2239646	2240905	.	+	.	ID=gene2387;Dbxref=GeneID:3798238;Name=glpB;Note=SDY2437;gbkey=Gene;gene=glpB;gene_biotype=protein_coding;locus_tag=SDY_2437
NC_007606.1	RefSeq	CDS	2239646	2240905	.	+	0	ID=cds2123;Parent=gene2387;Dbxref=Genbank:YP_404001.1,GeneID:3798238;Name=YP_404001.1;Note=sn-glycerol-3-phosphate dehydrogenase (anaerobic)%3B catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate%3B part of GlpABC complex%3B presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters;gbkey=CDS;gene=glpB;product=anaerobic glycerol-3-phosphate dehydrogenase subunit B;protein_id=YP_404001.1;transl_table=11
NC_007606.1	RefSeq	gene	2240902	2242092	.	+	.	ID=gene2388;Dbxref=GeneID:3798239;Name=glpC;Note=SDY2438;gbkey=Gene;gene=glpC;gene_biotype=protein_coding;locus_tag=SDY_2438
NC_007606.1	RefSeq	CDS	2240902	2242092	.	+	0	ID=cds2124;Parent=gene2388;Dbxref=Genbank:YP_404002.1,GeneID:3798239;Name=YP_404002.1;Note=anaerobic%3B with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate;gbkey=CDS;gene=glpC;product=sn-glycerol-3-phosphate dehydrogenase subunit C;protein_id=YP_404002.1;transl_table=11
NC_007606.1	RefSeq	gene	2242285	2243211	.	+	.	ID=gene2389;Dbxref=GeneID:3798240;Name=yfaD;Note=SDY2439;gbkey=Gene;gene=yfaD;gene_biotype=protein_coding;locus_tag=SDY_2439
NC_007606.1	RefSeq	CDS	2242285	2243211	.	+	0	ID=cds2125;Parent=gene2389;Dbxref=Genbank:YP_404003.1,GeneID:3798240;Name=YP_404003.1;Note=Code: S%3B COG: COG5464;gbkey=CDS;gene=yfaD;product=hypothetical protein;protein_id=YP_404003.1;transl_table=11
NC_007606.1	RefSeq	gene	2243252	2244055	.	-	.	ID=gene2390;Dbxref=GeneID:3798241;Name=SDY_2440;Note=SDY2440;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2440
NC_007606.1	RefSeq	CDS	2243252	2244055	.	-	0	ID=cds2126;Parent=gene2390;Dbxref=Genbank:YP_404004.1,GeneID:3798241;Name=YP_404004.1;Note=Code: G%3B COG: COG3836;gbkey=CDS;product=aldolase;protein_id=YP_404004.1;transl_table=11
NC_007606.1	RefSeq	gene	2244073	2245107	.	-	.	ID=gene2391;Dbxref=GeneID:3798242;Name=SDY_2441;Note=SDY2441%3B contains in-frame stop codon%3B original product:  transport protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2441;pseudo=true
NC_007606.1	RefSeq	region	2245152	2245919	.	+	.	ID=id411;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2245207	2245482	.	+	.	ID=gene2392;Dbxref=GeneID:18263098;Name=SDY_2440a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2440a
NC_007606.1	RefSeq	CDS	2245207	2245482	.	+	0	ID=cds2127;Parent=gene2392;Dbxref=Genbank:YP_009000784.1,GeneID:18263098;Name=YP_009000784.1;gbkey=CDS;product=transposase IS1;protein_id=YP_009000784.1;transl_table=11
NC_007606.1	RefSeq	gene	2245527	2245904	.	+	.	ID=gene2393;Dbxref=GeneID:3798243;Name=insB;Note=SDY2442;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2442
NC_007606.1	RefSeq	CDS	2245527	2245904	.	+	0	ID=cds2128;Parent=gene2393;Dbxref=Genbank:YP_404005.1,GeneID:3798243;Name=YP_404005.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404005.1;transl_table=11
NC_007606.1	RefSeq	gene	2245986	2248189	.	-	.	ID=gene2394;Dbxref=GeneID:3798244;Name=SDY_2443;Note=SDY2443%3B contains IS1 insertion%3B original product:  racemase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2443;pseudo=true
NC_007606.1	RefSeq	region	2247212	2247979	.	-	.	ID=id412;Dbxref=GeneID:3798244;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2247649	2247924	.	-	.	ID=gene2395;Dbxref=GeneID:3798246;Name=insA;Note=SDY2445;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2445
NC_007606.1	RefSeq	CDS	2247649	2247924	.	-	0	ID=cds2129;Parent=gene2395;Dbxref=Genbank:YP_404007.1,GeneID:3798246;Name=YP_404007.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404007.1;transl_table=11
NC_007606.1	RefSeq	gene	2248192	2248935	.	-	.	ID=gene2396;Dbxref=GeneID:3798247;Name=SDY_2446;Note=SDY2446;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2446;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	2248652	2249417	.	+	.	ID=id413;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2249008	2249403	.	+	.	ID=gene2397;Dbxref=GeneID:3798249;Name=SDY_2448;Note=SDY2448;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2448
NC_007606.1	RefSeq	CDS	2249008	2249403	.	+	0	ID=cds2130;Parent=gene2397;Dbxref=Genbank:YP_404010.1,GeneID:3798249;Name=YP_404010.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404010.1;transl_table=11
NC_007606.1	RefSeq	gene	2249487	2250014	.	+	.	ID=gene2398;Dbxref=GeneID:3798250;Name=SDY_2449;Note=SDY2449;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2449
NC_007606.1	RefSeq	CDS	2249487	2250014	.	+	0	ID=cds2131;Parent=gene2398;Dbxref=Genbank:YP_404011.1,GeneID:3798250;Name=YP_404011.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404011.1;transl_table=11
NC_007606.1	RefSeq	gene	2250018	2250985	.	+	.	ID=gene2399;Dbxref=GeneID:3798251;Name=SDY_2450;Note=SDY2450;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2450;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2250985	2252967	.	+	.	ID=gene2400;Dbxref=GeneID:3798252;Name=SDY_2451;Note=SDY2451;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2451;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2252964	2253854	.	+	.	ID=gene2401;Dbxref=GeneID:3797275;Name=SDY_2452;Note=SDY2452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2452;pseudogene=unknown
NC_007606.1	RefSeq	CDS	2252964	2253854	.	+	0	ID=cds2132;Parent=gene2401;Dbxref=Genbank:YP_404014.1,GeneID:3797275;Name=YP_404014.1;Note=Code: G%3B COG: COG0726;gbkey=CDS;product=hypothetical protein;protein_id=YP_404014.1;transl_table=11
NC_007606.1	RefSeq	gene	2253854	2255506	.	+	.	ID=gene2402;Dbxref=GeneID:3797276;Name=arnT;Note=SDY2453;gbkey=Gene;gene=arnT;gene_biotype=protein_coding;locus_tag=SDY_2453
NC_007606.1	RefSeq	CDS	2253854	2255506	.	+	0	ID=cds2133;Parent=gene2402;Dbxref=Genbank:YP_404015.1,GeneID:3797276;Name=YP_404015.1;Note=catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A;gbkey=CDS;gene=arnT;product=4-amino-4-deoxy-L-arabinose transferase;protein_id=YP_404015.1;transl_table=11
NC_007606.1	RefSeq	gene	2255838	2256224	.	+	.	ID=gene2403;Dbxref=GeneID:3797277;Name=SDY_2454;Note=SDY2454;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2454
NC_007606.1	RefSeq	CDS	2255838	2256224	.	+	0	ID=cds2134;Parent=gene2403;Dbxref=Genbank:YP_404016.2,GeneID:3797277;Name=YP_404016.2;Note=Code: GER%3B COG: COG0697;gbkey=CDS;product=hypothetical protein;protein_id=YP_404016.2;transl_table=11
NC_007606.1	RefSeq	gene	2256252	2256512	.	-	.	ID=gene2404;Dbxref=GeneID:3797278;Name=pmrD;Note=SDY2455;gbkey=Gene;gene=pmrD;gene_biotype=protein_coding;locus_tag=SDY_2455
NC_007606.1	RefSeq	CDS	2256252	2256512	.	-	0	ID=cds2135;Parent=gene2404;Dbxref=Genbank:YP_404017.1,GeneID:3797278;Name=YP_404017.1;gbkey=CDS;gene=pmrD;product=polymyxin resistance protein B;protein_id=YP_404017.1;transl_table=11
NC_007606.1	RefSeq	gene	2256592	2257947	.	-	.	ID=gene2405;Dbxref=GeneID:3797279;Name=menE;Note=SDY2456;gbkey=Gene;gene=menE;gene_biotype=protein_coding;locus_tag=SDY_2456
NC_007606.1	RefSeq	CDS	2256592	2257947	.	-	0	ID=cds2136;Parent=gene2405;Dbxref=Genbank:YP_404018.1,GeneID:3797279;Name=YP_404018.1;Note=Code: IQ%3B COG: COG0318;gbkey=CDS;gene=menE;product=O-succinylbenzoic acid--CoA ligase;protein_id=YP_404018.1;transl_table=11
NC_007606.1	RefSeq	gene	2257944	2258906	.	-	.	ID=gene2406;Dbxref=GeneID:3797280;Name=menC;Note=SDY2457;gbkey=Gene;gene=menC;gene_biotype=protein_coding;locus_tag=SDY_2457
NC_007606.1	RefSeq	CDS	2257944	2258906	.	-	0	ID=cds2137;Parent=gene2406;Dbxref=Genbank:YP_404019.1,GeneID:3797280;Name=YP_404019.1;Note=''catalyzes the dehydration of 2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate'';gbkey=CDS;gene=menC;product=O-succinylbenzoate synthase;protein_id=YP_404019.1;transl_table=11
NC_007606.1	RefSeq	gene	2258906	2259763	.	-	.	ID=gene2407;Dbxref=GeneID:3797281;Name=menB;Note=SDY2458;gbkey=Gene;gene=menB;gene_biotype=protein_coding;locus_tag=SDY_2458
NC_007606.1	RefSeq	CDS	2258906	2259763	.	-	0	ID=cds2138;Parent=gene2407;Dbxref=Genbank:YP_404020.1,GeneID:3797281;Name=YP_404020.1;Note=''catalyzes the formation of 1%2C4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA'';gbkey=CDS;gene=menB;product=naphthoate synthase;protein_id=YP_404020.1;transl_table=11
NC_007606.1	RefSeq	gene	2259778	2260536	.	-	.	ID=gene2408;Dbxref=GeneID:3797282;Name=yfbB;Note=SDY2459;gbkey=Gene;gene=yfbB;gene_biotype=protein_coding;locus_tag=SDY_2459
NC_007606.1	RefSeq	CDS	2259778	2260536	.	-	0	ID=cds2139;Parent=gene2408;Dbxref=Genbank:YP_404021.1,GeneID:3797282;Name=YP_404021.1;Note=catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA;gbkey=CDS;gene=yfbB;product=acyl-CoA thioester hydrolase;protein_id=YP_404021.1;transl_table=11
NC_007606.1	RefSeq	gene	2260533	2262203	.	-	.	ID=gene2409;Dbxref=GeneID:3797283;Name=menD;Note=SDY2460;gbkey=Gene;gene=menD;gene_biotype=protein_coding;locus_tag=SDY_2460
NC_007606.1	RefSeq	CDS	2260533	2262203	.	-	0	ID=cds2140;Parent=gene2409;Dbxref=Genbank:YP_404022.1,GeneID:3797283;Name=YP_404022.1;Note=SEPHCHC synthase%3B forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis;gbkey=CDS;gene=menD;product=2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase;protein_id=YP_404022.1;transl_table=11
NC_007606.1	RefSeq	gene	2262292	2263587	.	-	.	ID=gene2410;Dbxref=GeneID:3797284;Name=menF;Note=SDY2461;gbkey=Gene;gene=menF;gene_biotype=protein_coding;locus_tag=SDY_2461
NC_007606.1	RefSeq	CDS	2262292	2263587	.	-	0	ID=cds2141;Parent=gene2410;Dbxref=Genbank:YP_404023.2,GeneID:3797284;Name=YP_404023.2;Note=Code: HQ%3B COG: COG1169;gbkey=CDS;gene=menF;product=isochorismate hydroxymutase;protein_id=YP_404023.2;transl_table=11
NC_007606.1	RefSeq	gene	2263666	2263971	.	-	.	ID=gene2411;Dbxref=GeneID:3797285;Name=elaB;Note=SDY2462;gbkey=Gene;gene=elaB;gene_biotype=protein_coding;locus_tag=SDY_2462
NC_007606.1	RefSeq	CDS	2263666	2263971	.	-	0	ID=cds2142;Parent=gene2411;Dbxref=Genbank:YP_404024.1,GeneID:3797285;Name=YP_404024.1;Note=Code: S%3B COG: COG4575;gbkey=CDS;gene=elaB;product=hypothetical protein;protein_id=YP_404024.1;transl_table=11
NC_007606.1	RefSeq	gene	2264026	2264487	.	-	.	ID=gene2412;Dbxref=GeneID:3797286;Name=elaA;Note=SDY2463;gbkey=Gene;gene=elaA;gene_biotype=protein_coding;locus_tag=SDY_2463
NC_007606.1	RefSeq	CDS	2264026	2264487	.	-	0	ID=cds2143;Parent=gene2412;Dbxref=Genbank:YP_404025.1,GeneID:3797286;Name=YP_404025.1;Note=Code: R%3B COG: COG2153;gbkey=CDS;gene=elaA;product=hypothetical protein;protein_id=YP_404025.1;transl_table=11
NC_007606.1	RefSeq	gene	2264552	2265469	.	+	.	ID=gene2413;Dbxref=GeneID:3797287;Name=elaC;Note=SDY2464;gbkey=Gene;gene=elaC;gene_biotype=protein_coding;locus_tag=SDY_2464
NC_007606.1	RefSeq	CDS	2264552	2265469	.	+	0	ID=cds2144;Parent=gene2413;Dbxref=Genbank:YP_404026.2,GeneID:3797287;Name=YP_404026.2;Note=member of metallo-beta-lactamase%3B the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase%3B in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not%3B associates with two zinc ions;gbkey=CDS;gene=elaC;product=ribonuclease Z;protein_id=YP_404026.2;transl_table=11
NC_007606.1	RefSeq	gene	2265657	2266226	.	+	.	ID=gene2414;Dbxref=GeneID:3797288;Name=elaD;Note=SDY2465%3B truncated%3B original product:  sulfatase / phosphatase;gbkey=Gene;gene=elaD;gene_biotype=pseudogene;locus_tag=SDY_2465;pseudo=true
NC_007606.1	RefSeq	region	2266222	2266989	.	+	.	ID=id414;gbkey=mobile_element;gene=elaD
NC_007606.1	RefSeq	gene	2266277	2266552	.	+	.	ID=gene2415;Dbxref=GeneID:3797289;Name=insA;Note=SDY2466;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2466
NC_007606.1	RefSeq	CDS	2266277	2266552	.	+	0	ID=cds2145;Parent=gene2415;Dbxref=Genbank:YP_404027.1,GeneID:3797289;Name=YP_404027.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404027.1;transl_table=11
NC_007606.1	RefSeq	gene	2266597	2266974	.	+	.	ID=gene2416;Dbxref=GeneID:3797290;Name=insB;Note=SDY2467;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2467
NC_007606.1	RefSeq	CDS	2266597	2266974	.	+	0	ID=cds2146;Parent=gene2416;Dbxref=Genbank:YP_404028.1,GeneID:3797290;Name=YP_404028.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404028.1;transl_table=11
NC_007606.1	RefSeq	region	2266990	2267662	.	-	.	ID=id415;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2267333	2267605	.	-	.	ID=gene2417;Dbxref=GeneID:18263099;Name=SDY_4710;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4710
NC_007606.1	RefSeq	CDS	2267333	2267605	.	-	0	ID=cds2147;Parent=gene2417;Dbxref=Genbank:YP_009000785.1,GeneID:18263099;Name=YP_009000785.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000785.1;transl_table=11
NC_007606.1	RefSeq	region	2268027	2268792	.	+	.	ID=id416;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2268084	2268356	.	+	.	ID=gene2418;Dbxref=GeneID:18263100;Name=SDY_4711;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4711
NC_007606.1	RefSeq	CDS	2268084	2268356	.	+	0	ID=cds2148;Parent=gene2418;Dbxref=Genbank:YP_009000786.1,GeneID:18263100;Name=YP_009000786.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000786.1;transl_table=11
NC_007606.1	RefSeq	gene	2268383	2268778	.	+	.	ID=gene2419;Dbxref=GeneID:3797292;Name=SDY_2469;Note=SDY2469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2469
NC_007606.1	RefSeq	CDS	2268383	2268778	.	+	0	ID=cds2149;Parent=gene2419;Dbxref=Genbank:YP_404030.1,GeneID:3797292;Name=YP_404030.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404030.1;transl_table=11
NC_007606.1	RefSeq	gene	2269166	2269669	.	+	.	ID=gene2420;Dbxref=GeneID:3797294;Name=yfbM;Note=SDY2471;gbkey=Gene;gene=yfbM;gene_biotype=protein_coding;locus_tag=SDY_2471
NC_007606.1	RefSeq	CDS	2269166	2269669	.	+	0	ID=cds2150;Parent=gene2420;Dbxref=Genbank:YP_404032.1,GeneID:3797294;Name=YP_404032.1;gbkey=CDS;gene=yfbM;product=hypothetical protein;protein_id=YP_404032.1;transl_table=11
NC_007606.1	RefSeq	gene	2269736	2271193	.	-	.	ID=gene2421;Dbxref=GeneID:3797592;Name=nuoN;Note=SDY2472;gbkey=Gene;gene=nuoN;gene_biotype=protein_coding;locus_tag=SDY_2472
NC_007606.1	RefSeq	CDS	2269736	2271193	.	-	0	ID=cds2151;Parent=gene2421;Dbxref=Genbank:YP_404033.2,GeneID:3797592;Name=YP_404033.2;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoN;product=NADH dehydrogenase subunit N;protein_id=YP_404033.2;transl_table=11
NC_007606.1	RefSeq	gene	2271200	2272729	.	-	.	ID=gene2422;Dbxref=GeneID:3797593;Name=nuoM;Note=SDY2473;gbkey=Gene;gene=nuoM;gene_biotype=protein_coding;locus_tag=SDY_2473
NC_007606.1	RefSeq	CDS	2271200	2272729	.	-	0	ID=cds2152;Parent=gene2422;Dbxref=Genbank:YP_404034.1,GeneID:3797593;Name=YP_404034.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoM;product=NADH dehydrogenase subunit M;protein_id=YP_404034.1;transl_table=11
NC_007606.1	RefSeq	gene	2272960	2274801	.	-	.	ID=gene2423;Dbxref=GeneID:3797594;Name=nuoL;Note=SDY2474;gbkey=Gene;gene=nuoL;gene_biotype=protein_coding;locus_tag=SDY_2474
NC_007606.1	RefSeq	CDS	2272960	2274801	.	-	0	ID=cds2153;Parent=gene2423;Dbxref=Genbank:YP_404035.1,GeneID:3797594;Name=YP_404035.1;Note=Catalyzes the transfer of electrons from NADH to ubiquinone;gbkey=CDS;gene=nuoL;product=NADH dehydrogenase subunit L;protein_id=YP_404035.1;transl_table=11
NC_007606.1	RefSeq	gene	2274798	2275100	.	-	.	ID=gene2424;Dbxref=GeneID:3797595;Name=nuoK;Note=SDY2475;gbkey=Gene;gene=nuoK;gene_biotype=protein_coding;locus_tag=SDY_2475
NC_007606.1	RefSeq	CDS	2274798	2275100	.	-	0	ID=cds2154;Parent=gene2424;Dbxref=Genbank:YP_404036.1,GeneID:3797595;Name=YP_404036.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoK;product=NADH dehydrogenase subunit K;protein_id=YP_404036.1;transl_table=11
NC_007606.1	RefSeq	gene	2275097	2275651	.	-	.	ID=gene2425;Dbxref=GeneID:3797596;Name=nuoJ;Note=SDY2476;gbkey=Gene;gene=nuoJ;gene_biotype=protein_coding;locus_tag=SDY_2476
NC_007606.1	RefSeq	CDS	2275097	2275651	.	-	0	ID=cds2155;Parent=gene2425;Dbxref=Genbank:YP_404037.1,GeneID:3797596;Name=YP_404037.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoJ;product=NADH dehydrogenase subunit J;protein_id=YP_404037.1;transl_table=11
NC_007606.1	RefSeq	gene	2275663	2276205	.	-	.	ID=gene2426;Dbxref=GeneID:3797597;Name=nuoI;Note=SDY2477;gbkey=Gene;gene=nuoI;gene_biotype=protein_coding;locus_tag=SDY_2477
NC_007606.1	RefSeq	CDS	2275663	2276205	.	-	0	ID=cds2156;Parent=gene2426;Dbxref=Genbank:YP_404038.1,GeneID:3797597;Name=YP_404038.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoI;product=NADH dehydrogenase subunit I;protein_id=YP_404038.1;transl_table=11
NC_007606.1	RefSeq	gene	2276220	2277197	.	-	.	ID=gene2427;Dbxref=GeneID:3797598;Name=nuoH;Note=SDY2478;gbkey=Gene;gene=nuoH;gene_biotype=protein_coding;locus_tag=SDY_2478
NC_007606.1	RefSeq	CDS	2276220	2277197	.	-	0	ID=cds2157;Parent=gene2427;Dbxref=Genbank:YP_404039.1,GeneID:3797598;Name=YP_404039.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoH;product=NADH dehydrogenase subunit H;protein_id=YP_404039.1;transl_table=11
NC_007606.1	RefSeq	gene	2277194	2279926	.	-	.	ID=gene2428;Dbxref=GeneID:3797599;Name=nuoG;Note=SDY2479;gbkey=Gene;gene=nuoG;gene_biotype=protein_coding;locus_tag=SDY_2479
NC_007606.1	RefSeq	CDS	2277194	2279926	.	-	0	ID=cds2158;Parent=gene2428;Dbxref=Genbank:YP_404040.1,GeneID:3797599;Name=YP_404040.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoG;product=NADH dehydrogenase subunit G;protein_id=YP_404040.1;transl_table=11
NC_007606.1	RefSeq	gene	2279973	2281310	.	-	.	ID=gene2429;Dbxref=GeneID:3797600;Name=nuoF;Note=SDY2480;gbkey=Gene;gene=nuoF;gene_biotype=protein_coding;locus_tag=SDY_2480
NC_007606.1	RefSeq	CDS	2279973	2281310	.	-	0	ID=cds2159;Parent=gene2429;Dbxref=Genbank:YP_404041.1,GeneID:3797600;Name=YP_404041.1;Note=''shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B NuoF is part of the soluble NADH dehydrogenase fragment%2C which represents the electron input part of NADH dehydrogenase'';gbkey=CDS;gene=nuoF;product=NADH dehydrogenase I subunit F;protein_id=YP_404041.1;transl_table=11
NC_007606.1	RefSeq	gene	2281307	2281807	.	-	.	ID=gene2430;Dbxref=GeneID:3797601;Name=nuoE;Note=SDY2481;gbkey=Gene;gene=nuoE;gene_biotype=protein_coding;locus_tag=SDY_2481
NC_007606.1	RefSeq	CDS	2281307	2281807	.	-	0	ID=cds2160;Parent=gene2430;Dbxref=Genbank:YP_404042.1,GeneID:3797601;Name=YP_404042.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoE;product=NADH dehydrogenase subunit E;protein_id=YP_404042.1;transl_table=11
NC_007606.1	RefSeq	gene	2281810	2283612	.	-	.	ID=gene2431;Dbxref=GeneID:3797602;Name=nuoC;Note=SDY2482;gbkey=Gene;gene=nuoC;gene_biotype=protein_coding;locus_tag=SDY_2482
NC_007606.1	RefSeq	CDS	2281810	2283612	.	-	0	ID=cds2161;Parent=gene2431;Dbxref=Genbank:YP_404043.1,GeneID:3797602;Name=YP_404043.1;Note=''NuoCD%3B NDH-1 shuttles electrons from NADH%2C via FMN and iron-sulfur (Fe-S) centers%2C to quinones in the respiratory chain%3B subunits NuoCD%2C E%2C F%2C and G constitute the peripheral sector of the complex%3B in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms'';gbkey=CDS;gene=nuoC;product=bifunctional NADH:ubiquinone oxidoreductase subunit C/D;protein_id=YP_404043.1;transl_table=11
NC_007606.1	RefSeq	gene	2283706	2284368	.	-	.	ID=gene2432;Dbxref=GeneID:3797603;Name=nuoB;Note=SDY2483;gbkey=Gene;gene=nuoB;gene_biotype=protein_coding;locus_tag=SDY_2483
NC_007606.1	RefSeq	CDS	2283706	2284368	.	-	0	ID=cds2162;Parent=gene2432;Dbxref=Genbank:YP_404044.1,GeneID:3797603;Name=YP_404044.1;Note=The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen;gbkey=CDS;gene=nuoB;product=NADH dehydrogenase subunit B;protein_id=YP_404044.1;transl_table=11
NC_007606.1	RefSeq	gene	2284384	2284827	.	-	.	ID=gene2433;Dbxref=GeneID:3797604;Name=nuoA;Note=SDY2484;gbkey=Gene;gene=nuoA;gene_biotype=protein_coding;locus_tag=SDY_2484
NC_007606.1	RefSeq	CDS	2284384	2284827	.	-	0	ID=cds2163;Parent=gene2433;Dbxref=Genbank:YP_404045.1,GeneID:3797604;Name=YP_404045.1;Note=Catalyzes the transfer of electrons from NADH to quinone;gbkey=CDS;gene=nuoA;product=NADH dehydrogenase subunit A;protein_id=YP_404045.1;transl_table=11
NC_007606.1	RefSeq	gene	2285459	2286397	.	-	.	ID=gene2434;Dbxref=GeneID:3797605;Name=lrhA;Note=SDY2485;gbkey=Gene;gene=lrhA;gene_biotype=protein_coding;locus_tag=SDY_2485
NC_007606.1	RefSeq	CDS	2285459	2286397	.	-	0	ID=cds2164;Parent=gene2434;Dbxref=Genbank:YP_404046.1,GeneID:3797605;Name=YP_404046.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=lrhA;product=LysR family transcriptional regulator;protein_id=YP_404046.1;transl_table=11
NC_007606.1	RefSeq	gene	2287311	2288528	.	+	.	ID=gene2435;Dbxref=GeneID:3797606;Name=SDY_2486;Note=SDY2486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2486
NC_007606.1	RefSeq	CDS	2287311	2288528	.	+	0	ID=cds2165;Parent=gene2435;Dbxref=Genbank:YP_404047.1,GeneID:3797606;Name=YP_404047.1;Note=''broad specificity%3B family IV%3B in Corynebacterium glutamicum this protein can use glutamate%2C 2-aminobutyrate%2C and aspartate as amino donors and pyruvate as the acceptor'';gbkey=CDS;product=aminotransferase;protein_id=YP_404047.1;transl_table=11
NC_007606.1	RefSeq	gene	2288612	2289211	.	+	.	ID=gene2436;Dbxref=GeneID:3797607;Name=SDY_2487;Note=SDY2487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2487
NC_007606.1	RefSeq	CDS	2288612	2289211	.	+	0	ID=cds2166;Parent=gene2436;Dbxref=Genbank:YP_404048.1,GeneID:3797607;Name=YP_404048.1;Note=Code: R%3B COG: COG1896;gbkey=CDS;product=hypothetical protein;protein_id=YP_404048.1;transl_table=11
NC_007606.1	RefSeq	gene	2289270	2291102	.	-	.	ID=gene2437;Dbxref=GeneID:3797608;Name=yfbS;Note=SDY2488;gbkey=Gene;gene=yfbS;gene_biotype=protein_coding;locus_tag=SDY_2488
NC_007606.1	RefSeq	CDS	2289270	2291102	.	-	0	ID=cds2167;Parent=gene2437;Dbxref=Genbank:YP_404049.1,GeneID:3797608;Name=YP_404049.1;Note=Code: P%3B COG: COG0471;gbkey=CDS;gene=yfbS;product=transport protein;protein_id=YP_404049.1;transl_table=11
NC_007606.1	RefSeq	gene	2291189	2291839	.	-	.	ID=gene2438;Dbxref=GeneID:3797609;Name=yfbT;Note=SDY2489;gbkey=Gene;gene=yfbT;gene_biotype=protein_coding;locus_tag=SDY_2489
NC_007606.1	RefSeq	CDS	2291189	2291839	.	-	0	ID=cds2168;Parent=gene2438;Dbxref=Genbank:YP_404050.1,GeneID:3797609;Name=YP_404050.1;Note=Code: R%3B COG: COG0637;gbkey=CDS;gene=yfbT;product=phosphatase;protein_id=YP_404050.1;transl_table=11
NC_007606.1	RefSeq	gene	2291850	2292344	.	-	.	ID=gene2439;Dbxref=GeneID:3797610;Name=SDY_2490;Note=SDY2490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2490
NC_007606.1	RefSeq	CDS	2291850	2292344	.	-	0	ID=cds2169;Parent=gene2439;Dbxref=Genbank:YP_404051.2,GeneID:3797610;Name=YP_404051.2;Note=Code: S%3B COG: COG3013;gbkey=CDS;product=hypothetical protein;protein_id=YP_404051.2;transl_table=11
NC_007606.1	RefSeq	gene	2292427	2292882	.	-	.	ID=gene2440;Dbxref=GeneID:3799537;Name=SDY_2491;Note=SDY2491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2491
NC_007606.1	RefSeq	CDS	2292427	2292882	.	-	0	ID=cds2170;Parent=gene2440;Dbxref=Genbank:YP_404052.1,GeneID:3799537;Name=YP_404052.1;Note=Code: S%3B COG: COG3092;gbkey=CDS;product=hypothetical protein;protein_id=YP_404052.1;transl_table=11
NC_007606.1	RefSeq	gene	2293220	2294422	.	+	.	ID=gene2441;Dbxref=GeneID:3799538;Name=ackA;Note=SDY2492;gbkey=Gene;gene=ackA;gene_biotype=protein_coding;locus_tag=SDY_2492
NC_007606.1	RefSeq	CDS	2293220	2294422	.	+	0	ID=cds2171;Parent=gene2441;Dbxref=Genbank:YP_404053.1,GeneID:3799538;Name=YP_404053.1;Note=AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation%3B utilizes magnesium and ATP%3B also involved in conversion of acetate to aceyl-CoA;gbkey=CDS;gene=ackA;product=acetate kinase;protein_id=YP_404053.1;transl_table=11
NC_007606.1	RefSeq	gene	2294497	2296641	.	+	.	ID=gene2442;Dbxref=GeneID:3799539;Name=pta;Note=SDY2493;gbkey=Gene;gene=pta;gene_biotype=protein_coding;locus_tag=SDY_2493
NC_007606.1	RefSeq	CDS	2294497	2296641	.	+	0	ID=cds2172;Parent=gene2442;Dbxref=Genbank:YP_404054.1,GeneID:3799539;Name=YP_404054.1;Note=catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate%3B when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate;gbkey=CDS;gene=pta;product=phosphate acetyltransferase;protein_id=YP_404054.1;transl_table=11
NC_007606.1	RefSeq	gene	2296831	2298351	.	+	.	ID=gene2443;Dbxref=GeneID:3799540;Name=yfcC;Note=SDY2494;gbkey=Gene;gene=yfcC;gene_biotype=protein_coding;locus_tag=SDY_2494
NC_007606.1	RefSeq	CDS	2296831	2298351	.	+	0	ID=cds2173;Parent=gene2443;Dbxref=Genbank:YP_404055.2,GeneID:3799540;Name=YP_404055.2;Note=Code: S%3B COG: COG1288;gbkey=CDS;gene=yfcC;product=hypothetical protein;protein_id=YP_404055.2;transl_table=11
NC_007606.1	RefSeq	gene	2298384	2298926	.	-	.	ID=gene2444;Dbxref=GeneID:3799541;Name=SDY_2495;Note=SDY2495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2495
NC_007606.1	RefSeq	CDS	2298384	2298926	.	-	0	ID=cds2174;Parent=gene2444;Dbxref=Genbank:YP_404056.1,GeneID:3799541;Name=YP_404056.1;Note=Code: LR%3B COG: COG0494;gbkey=CDS;product=regulator;protein_id=YP_404056.1;transl_table=11
NC_007606.1	RefSeq	gene	2298984	2299538	.	-	.	ID=gene2445;Dbxref=GeneID:3799542;Name=yfcE;Note=SDY2496;gbkey=Gene;gene=yfcE;gene_biotype=protein_coding;locus_tag=SDY_2496
NC_007606.1	RefSeq	CDS	2298984	2299538	.	-	0	ID=cds2175;Parent=gene2445;Dbxref=Genbank:YP_404057.1,GeneID:3799542;Name=YP_404057.1;Note=Code: R%3B COG: COG0622;gbkey=CDS;gene=yfcE;product=phosphodiesterase;protein_id=YP_404057.1;transl_table=11
NC_007606.1	RefSeq	gene	2299591	2300235	.	-	.	ID=gene2446;Dbxref=GeneID:3799543;Name=SDY_2497;Note=SDY2497;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2497;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2300371	2301018	.	+	.	ID=gene2447;Dbxref=GeneID:3799545;Name=yfcG;Note=SDY2499;gbkey=Gene;gene=yfcG;gene_biotype=protein_coding;locus_tag=SDY_2499
NC_007606.1	RefSeq	CDS	2300371	2301018	.	+	0	ID=cds2176;Parent=gene2447;Dbxref=Genbank:YP_404060.1,GeneID:3799545;Name=YP_404060.1;Note=Code: O%3B COG: COG0625;gbkey=CDS;gene=yfcG;product=glutathione S-transferase;protein_id=YP_404060.1;transl_table=11
NC_007606.1	RefSeq	gene	2301075	2301437	.	+	.	ID=gene2448;Dbxref=GeneID:3799546;Name=folX;Note=SDY2500;gbkey=Gene;gene=folX;gene_biotype=protein_coding;locus_tag=SDY_2500
NC_007606.1	RefSeq	CDS	2301075	2301437	.	+	0	ID=cds2177;Parent=gene2448;Dbxref=Genbank:YP_404061.1,GeneID:3799546;Name=YP_404061.1;Note=catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate;gbkey=CDS;gene=folX;product=D-erythro-7%2C8-dihydroneopterin triphosphate 2'-epimerase;protein_id=YP_404061.1;transl_table=11
NC_007606.1	RefSeq	gene	2301458	2302351	.	+	.	ID=gene2449;Dbxref=GeneID:3799547;Name=SDY_2501;Note=SDY2501;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2501
NC_007606.1	RefSeq	CDS	2301458	2302351	.	+	0	ID=cds2178;Parent=gene2449;Dbxref=Genbank:YP_404062.1,GeneID:3799547;Name=YP_404062.1;Note=Code: R%3B COG: COG1090;gbkey=CDS;product=sugar nucleotide epimerase;protein_id=YP_404062.1;transl_table=11
NC_007606.1	RefSeq	gene	2302399	2303019	.	-	.	ID=gene2450;Dbxref=GeneID:3799548;Name=yfcI;Note=SDY2502;gbkey=Gene;gene=yfcI;gene_biotype=protein_coding;locus_tag=SDY_2502
NC_007606.1	RefSeq	CDS	2302399	2303019	.	-	0	ID=cds2179;Parent=gene2450;Dbxref=Genbank:YP_404063.1,GeneID:3799548;Name=YP_404063.1;Note=Code: S%3B COG: COG5464;gbkey=CDS;gene=yfcI;product=hypothetical protein;protein_id=YP_404063.1;transl_table=11
NC_007606.1	RefSeq	region	2303049	2303799	.	+	.	ID=id417;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2304242	2305015	.	-	.	ID=gene2451;Dbxref=GeneID:3799551;Name=hisP;Note=SDY2505;gbkey=Gene;gene=hisP;gene_biotype=protein_coding;locus_tag=SDY_2505
NC_007606.1	RefSeq	CDS	2304242	2305015	.	-	0	ID=cds2180;Parent=gene2451;Dbxref=Genbank:YP_404066.1,GeneID:3799551;Name=YP_404066.1;Note=Code: E%3B COG: COG4598;gbkey=CDS;gene=hisP;product=histidine/lysine/arginine/ornithine transporter protein;protein_id=YP_404066.1;transl_table=11
NC_007606.1	RefSeq	gene	2305023	2305739	.	-	.	ID=gene2452;Dbxref=GeneID:3799552;Name=hisM;Note=SDY2506;gbkey=Gene;gene=hisM;gene_biotype=protein_coding;locus_tag=SDY_2506
NC_007606.1	RefSeq	CDS	2305023	2305739	.	-	0	ID=cds2181;Parent=gene2452;Dbxref=Genbank:YP_404067.1,GeneID:3799552;Name=YP_404067.1;Note=Code: E%3B COG: COG4160;gbkey=CDS;gene=hisM;product=histidine transport system protein M;protein_id=YP_404067.1;transl_table=11
NC_007606.1	RefSeq	gene	2305736	2306422	.	-	.	ID=gene2453;Dbxref=GeneID:3799553;Name=hisQ;Note=SDY2507;gbkey=Gene;gene=hisQ;gene_biotype=protein_coding;locus_tag=SDY_2507
NC_007606.1	RefSeq	CDS	2305736	2306422	.	-	0	ID=cds2182;Parent=gene2453;Dbxref=Genbank:YP_404068.1,GeneID:3799553;Name=YP_404068.1;Note=Code: E%3B COG: COG4215;gbkey=CDS;gene=hisQ;product=histidine transport system permease;protein_id=YP_404068.1;transl_table=11
NC_007606.1	RefSeq	gene	2306512	2307294	.	-	.	ID=gene2454;Dbxref=GeneID:3799554;Name=hisJ;Note=SDY2508;gbkey=Gene;gene=hisJ;gene_biotype=protein_coding;locus_tag=SDY_2508
NC_007606.1	RefSeq	CDS	2306512	2307294	.	-	0	ID=cds2183;Parent=gene2454;Dbxref=Genbank:YP_404069.1,GeneID:3799554;Name=YP_404069.1;Note=Code: ET%3B COG: COG0834;gbkey=CDS;gene=hisJ;product=high-affinity histidine transport system substrate-binding protein;protein_id=YP_404069.1;transl_table=11
NC_007606.1	RefSeq	gene	2307515	2308297	.	-	.	ID=gene2455;Dbxref=GeneID:3799555;Name=argT;Note=SDY2509;gbkey=Gene;gene=argT;gene_biotype=protein_coding;locus_tag=SDY_2509
NC_007606.1	RefSeq	CDS	2307515	2308297	.	-	0	ID=cds2184;Parent=gene2455;Dbxref=Genbank:YP_404070.1,GeneID:3799555;Name=YP_404070.1;Note=Code: ET%3B COG: COG0834;gbkey=CDS;gene=argT;product=lysine-%2C arginine-%2C ornithine-binding periplasmic protein;protein_id=YP_404070.1;transl_table=11
NC_007606.1	RefSeq	gene	2308562	2309131	.	-	.	ID=gene2456;Dbxref=GeneID:3799556;Name=ubiX;Note=SDY2510;gbkey=Gene;gene=ubiX;gene_biotype=protein_coding;locus_tag=SDY_2510
NC_007606.1	RefSeq	CDS	2308562	2309131	.	-	0	ID=cds2185;Parent=gene2456;Dbxref=Genbank:YP_404071.1,GeneID:3799556;Name=YP_404071.1;Note=catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate;gbkey=CDS;gene=ubiX;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=YP_404071.1;transl_table=11
NC_007606.1	RefSeq	gene	2309226	2310743	.	-	.	ID=gene2457;Dbxref=GeneID:3797651;Name=purF;Note=SDY2511;gbkey=Gene;gene=purF;gene_biotype=protein_coding;locus_tag=SDY_2511
NC_007606.1	RefSeq	CDS	2309226	2310743	.	-	0	ID=cds2186;Parent=gene2457;Dbxref=Genbank:YP_404072.1,GeneID:3797651;Name=YP_404072.1;Note=Catalyzes first step of the de novo purine nucleotide biosynthetic pathway;gbkey=CDS;gene=purF;product=amidophosphoribosyltransferase;protein_id=YP_404072.1;transl_table=11
NC_007606.1	RefSeq	gene	2310780	2311268	.	-	.	ID=gene2458;Dbxref=GeneID:3797652;Name=cvpA;Note=SDY2512;gbkey=Gene;gene=cvpA;gene_biotype=protein_coding;locus_tag=SDY_2512
NC_007606.1	RefSeq	CDS	2310780	2311268	.	-	0	ID=cds2187;Parent=gene2458;Dbxref=Genbank:YP_404073.1,GeneID:3797652;Name=YP_404073.1;Note=membrane protein required for colicin V production;gbkey=CDS;gene=cvpA;product=colicin V production protein;protein_id=YP_404073.1;transl_table=11
NC_007606.1	RefSeq	gene	2311709	2312371	.	-	.	ID=gene2459;Dbxref=GeneID:3797653;Name=dedD;Note=SDY2513;gbkey=Gene;gene=dedD;gene_biotype=protein_coding;locus_tag=SDY_2513
NC_007606.1	RefSeq	CDS	2311709	2312371	.	-	0	ID=cds2188;Parent=gene2459;Dbxref=Genbank:YP_404074.2,GeneID:3797653;Name=YP_404074.2;Note=Code: S%3B COG: COG3147;gbkey=CDS;gene=dedD;product=hypothetical protein;protein_id=YP_404074.2;transl_table=11
NC_007606.1	RefSeq	gene	2312361	2313629	.	-	.	ID=gene2460;Dbxref=GeneID:3797654;Name=folC;Note=SDY2514;gbkey=Gene;gene=folC;gene_biotype=protein_coding;locus_tag=SDY_2514
NC_007606.1	RefSeq	CDS	2312361	2313629	.	-	0	ID=cds2189;Parent=gene2460;Dbxref=Genbank:YP_404075.1,GeneID:3797654;Name=YP_404075.1;Note=Code: H%3B COG: COG0285;gbkey=CDS;gene=folC;product=bifunctional folylpolyglutamate synthase/ dihydrofolate synthase;protein_id=YP_404075.1;transl_table=11
NC_007606.1	RefSeq	gene	2313699	2314613	.	-	.	ID=gene2461;Dbxref=GeneID:3797655;Name=accD;Note=SDY2515;gbkey=Gene;gene=accD;gene_biotype=protein_coding;locus_tag=SDY_2515
NC_007606.1	RefSeq	CDS	2313699	2314613	.	-	0	ID=cds2190;Parent=gene2461;Dbxref=Genbank:YP_404076.1,GeneID:3797655;Name=YP_404076.1;Note=catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%3B forms a tetramer of AccA2D2 subunits;gbkey=CDS;gene=accD;product=acetyl-CoA carboxylase subunit beta;protein_id=YP_404076.1;transl_table=11
NC_007606.1	RefSeq	gene	2314769	2315428	.	-	.	ID=gene2462;Dbxref=GeneID:3797656;Name=dedA;Note=SDY2516;gbkey=Gene;gene=dedA;gene_biotype=protein_coding;locus_tag=SDY_2516
NC_007606.1	RefSeq	CDS	2314769	2315428	.	-	0	ID=cds2191;Parent=gene2462;Dbxref=Genbank:YP_404077.1,GeneID:3797656;Name=YP_404077.1;Note=Code: S%3B COG: COG0586;gbkey=CDS;gene=dedA;product=hypothetical protein;protein_id=YP_404077.1;transl_table=11
NC_007606.1	RefSeq	gene	2315511	2316323	.	-	.	ID=gene2463;Dbxref=GeneID:3797657;Name=truA;Note=SDY2517;gbkey=Gene;gene=truA;gene_biotype=protein_coding;gene_synonym=hisT;locus_tag=SDY_2517
NC_007606.1	RefSeq	CDS	2315511	2316323	.	-	0	ID=cds2192;Parent=gene2463;Dbxref=Genbank:YP_404078.1,GeneID:3797657;Name=YP_404078.1;Note=''mediates pseudouridylation (positions 38%2C 39%2C 40) at the tRNA anticodon region which contributes to the structural stability'';gbkey=CDS;gene=truA;product=tRNA pseudouridine synthase A;protein_id=YP_404078.1;transl_table=11
NC_007606.1	RefSeq	gene	2316323	2317336	.	-	.	ID=gene2464;Dbxref=GeneID:3797658;Name=usg;Note=SDY2518;gbkey=Gene;gene=usg;gene_biotype=protein_coding;locus_tag=SDY_2518
NC_007606.1	RefSeq	CDS	2316323	2317336	.	-	0	ID=cds2193;Parent=gene2464;Dbxref=Genbank:YP_404079.1,GeneID:3797658;Name=YP_404079.1;Note=Code: E%3B COG: COG0136;gbkey=CDS;gene=usg;product=semialdehyde dehydrogenase;protein_id=YP_404079.1;transl_table=11
NC_007606.1	RefSeq	gene	2317402	2318538	.	-	.	ID=gene2465;Dbxref=GeneID:3797659;Name=pdxB;Note=SDY2519;gbkey=Gene;gene=pdxB;gene_biotype=protein_coding;locus_tag=SDY_2519
NC_007606.1	RefSeq	CDS	2317402	2318538	.	-	0	ID=cds2194;Parent=gene2465;Dbxref=Genbank:YP_404080.1,GeneID:3797659;Name=YP_404080.1;Note=Code: HE%3B COG: COG0111;gbkey=CDS;gene=pdxB;product=erythronate-4-phosphate dehydrogenase;protein_id=YP_404080.1;transl_table=11
NC_007606.1	RefSeq	gene	2318637	2319632	.	+	.	ID=gene2466;Dbxref=GeneID:3797660;Name=flk;Note=SDY2520;gbkey=Gene;gene=flk;gene_biotype=protein_coding;locus_tag=SDY_2520
NC_007606.1	RefSeq	CDS	2318637	2319632	.	+	0	ID=cds2195;Parent=gene2466;Dbxref=Genbank:YP_404081.1,GeneID:3797660;Name=YP_404081.1;Note=in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system%3B lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm%3B inner membrane-anchored protein;gbkey=CDS;gene=flk;product=flagella biosynthesis regulator;protein_id=YP_404081.1;transl_table=11
NC_007606.1	RefSeq	gene	2319629	2320081	.	-	.	ID=gene2467;Dbxref=GeneID:3797661;Name=SDY_2521;Note=SDY2521;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2521
NC_007606.1	RefSeq	CDS	2319629	2320081	.	-	0	ID=cds2196;Parent=gene2467;Dbxref=Genbank:YP_404082.1,GeneID:3797661;Name=YP_404082.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404082.1;transl_table=11
NC_007606.1	RefSeq	gene	2320477	2321697	.	-	.	ID=gene2468;Dbxref=GeneID:3797662;Name=fabB;Note=SDY2522;gbkey=Gene;gene=fabB;gene_biotype=protein_coding;locus_tag=SDY_2522
NC_007606.1	RefSeq	CDS	2320477	2321697	.	-	0	ID=cds2197;Parent=gene2468;Dbxref=Genbank:YP_404083.1,GeneID:3797662;Name=YP_404083.1;Note=''FabB%2C beta-Ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP'';gbkey=CDS;gene=fabB;product=3-oxoacyl-ACP synthase;protein_id=YP_404083.1;transl_table=11
NC_007606.1	RefSeq	gene	2321856	2323862	.	+	.	ID=gene2469;Dbxref=GeneID:3797663;Name=mnmC;Note=SDY2523;gbkey=Gene;gene=mnmC;gene_biotype=protein_coding;gene_synonym=trmC,yfcK;locus_tag=SDY_2523
NC_007606.1	RefSeq	CDS	2321856	2323862	.	+	0	ID=cds2198;Parent=gene2469;Dbxref=Genbank:YP_404084.2,GeneID:3797663;Name=YP_404084.2;Note=catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules;gbkey=CDS;gene=mnmC;product=5-methylaminomethyl-2-thiouridine methyltransferase;protein_id=YP_404084.2;transl_table=11
NC_007606.1	RefSeq	gene	2323983	2324261	.	-	.	ID=gene2470;Dbxref=GeneID:3797664;Name=SDY_2524;Note=SDY2524;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2524
NC_007606.1	RefSeq	CDS	2323983	2324261	.	-	0	ID=cds2199;Parent=gene2470;Dbxref=Genbank:YP_404085.1,GeneID:3797664;Name=YP_404085.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404085.1;transl_table=11
NC_007606.1	RefSeq	gene	2324295	2324843	.	-	.	ID=gene2471;Dbxref=GeneID:3797665;Name=SDY_2525;Note=SDY2525;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2525
NC_007606.1	RefSeq	CDS	2324295	2324843	.	-	0	ID=cds2200;Parent=gene2471;Dbxref=Genbank:YP_404086.1,GeneID:3797665;Name=YP_404086.1;Note=Code: S%3B COG: COG3101;gbkey=CDS;product=transporting ATPase;protein_id=YP_404086.1;transl_table=11
NC_007606.1	RefSeq	gene	2324843	2325652	.	-	.	ID=gene2472;Dbxref=GeneID:3797666;Name=yfcA;Note=SDY2526%3B contains in-frame stop codon%3B original product:  structural protein;gbkey=Gene;gene=yfcA;gene_biotype=pseudogene;locus_tag=SDY_2526;pseudo=true
NC_007606.1	RefSeq	gene	2325652	2326476	.	-	.	ID=gene2473;Dbxref=GeneID:3797667;Name=mepA;Note=SDY2527;gbkey=Gene;gene=mepA;gene_biotype=protein_coding;locus_tag=SDY_2527
NC_007606.1	RefSeq	CDS	2325652	2326476	.	-	0	ID=cds2201;Parent=gene2473;Dbxref=Genbank:YP_404087.1,GeneID:3797667;Name=YP_404087.1;Note=D-alanyl-D-alanine endopeptidase%3B functions in hydrolyzing cell wall peptidoglycan%3B similar to LAS metallopeptidases%3B forms a dimer in periplasm;gbkey=CDS;gene=mepA;product=penicillin-insensitive murein endopeptidase;protein_id=YP_404087.1;transl_table=11
NC_007606.1	RefSeq	gene	2326480	2327565	.	-	.	ID=gene2474;Dbxref=GeneID:3797668;Name=aroC;Note=SDY2528;gbkey=Gene;gene=aroC;gene_biotype=protein_coding;locus_tag=SDY_2528
NC_007606.1	RefSeq	CDS	2326480	2327565	.	-	0	ID=cds2202;Parent=gene2474;Dbxref=Genbank:YP_404088.1,GeneID:3797668;Name=YP_404088.1;Note=catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroC;product=chorismate synthase;protein_id=YP_404088.1;transl_table=11
NC_007606.1	RefSeq	gene	2327600	2328532	.	-	.	ID=gene2475;Dbxref=GeneID:3797631;Name=SDY_2530;Note=SDY2530;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2530
NC_007606.1	RefSeq	CDS	2327600	2328532	.	-	0	ID=cds2203;Parent=gene2475;Dbxref=Genbank:YP_404089.2,GeneID:3797631;Name=YP_404089.2;Note=involved in methylation of ribosomal protein L3;gbkey=CDS;product=N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase;protein_id=YP_404089.2;transl_table=11
NC_007606.1	RefSeq	gene	2328698	2329249	.	+	.	ID=gene2476;Dbxref=GeneID:3797669;Name=SDY_2529;Note=SDY2529;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2529
NC_007606.1	RefSeq	CDS	2328698	2329249	.	+	0	ID=cds2204;Parent=gene2476;Dbxref=Genbank:YP_404090.1,GeneID:3797669;Name=YP_404090.1;Note=Code: S%3B COG: COG2840;gbkey=CDS;product=hypothetical protein;protein_id=YP_404090.1;transl_table=11
NC_007606.1	RefSeq	gene	2329418	2330256	.	-	.	ID=gene2477;Dbxref=GeneID:3797632;Name=SDY_2531;Note=SDY2531;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2531;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2330258	2330797	.	-	.	ID=gene2478;Dbxref=GeneID:3797633;Name=SDY_2532;Note=SDY2532;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2532
NC_007606.1	RefSeq	CDS	2330258	2330797	.	-	0	ID=cds2205;Parent=gene2478;Dbxref=Genbank:YP_404092.1,GeneID:3797633;Name=YP_404092.1;Note=Code: NU%3B COG: COG3539;gbkey=CDS;product=fimbrial-like protein;protein_id=YP_404092.1;transl_table=11
NC_007606.1	RefSeq	gene	2330794	2331282	.	-	.	ID=gene2479;Dbxref=GeneID:3797634;Name=SDY_2533;Note=SDY2533;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2533
NC_007606.1	RefSeq	CDS	2330794	2331282	.	-	0	ID=cds2206;Parent=gene2479;Dbxref=Genbank:YP_404093.1,GeneID:3797634;Name=YP_404093.1;Note=Code: NU%3B COG: COG3539;gbkey=CDS;product=hypothetical protein;protein_id=YP_404093.1;transl_table=11
NC_007606.1	RefSeq	gene	2331279	2331785	.	-	.	ID=gene2480;Dbxref=GeneID:3797635;Name=SDY_2534;Note=SDY2534;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2534
NC_007606.1	RefSeq	CDS	2331279	2331785	.	-	0	ID=cds2207;Parent=gene2480;Dbxref=Genbank:YP_404094.1,GeneID:3797635;Name=YP_404094.1;Note=Code: NU%3B COG: COG3539;gbkey=CDS;product=fimbrial protein;protein_id=YP_404094.1;transl_table=11
NC_007606.1	RefSeq	gene	2331801	2332550	.	-	.	ID=gene2481;Dbxref=GeneID:3797636;Name=yfcS;Note=SDY2535;gbkey=Gene;gene=yfcS;gene_biotype=protein_coding;locus_tag=SDY_2535
NC_007606.1	RefSeq	CDS	2331801	2332550	.	-	0	ID=cds2208;Parent=gene2481;Dbxref=Genbank:YP_404095.1,GeneID:3797636;Name=YP_404095.1;Note=Code: NU%3B COG: COG3121;gbkey=CDS;gene=yfcS;product=chaperone;protein_id=YP_404095.1;transl_table=11
NC_007606.1	RefSeq	gene	2332573	2333465	.	-	.	ID=gene2482;Dbxref=GeneID:3797637;Name=SDY_2536;Note=SDY2536;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2536;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2335293	2335856	.	-	.	ID=gene2483;Dbxref=GeneID:3797639;Name=SDY_2538;Note=SDY2538;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2538;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	2336227	2336994	.	-	.	ID=id418;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2336242	2336619	.	-	.	ID=gene2484;Dbxref=GeneID:3797640;Name=insB;Note=SDY2539;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2539
NC_007606.1	RefSeq	CDS	2336242	2336619	.	-	0	ID=cds2209;Parent=gene2484;Dbxref=Genbank:YP_404099.1,GeneID:3797640;Name=YP_404099.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404099.1;transl_table=11
NC_007606.1	RefSeq	gene	2336664	2336939	.	-	.	ID=gene2485;Dbxref=GeneID:3797641;Name=insA;Note=SDY2540;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2540
NC_007606.1	RefSeq	CDS	2336664	2336939	.	-	0	ID=cds2210;Parent=gene2485;Dbxref=Genbank:YP_404100.1,GeneID:3797641;Name=YP_404100.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404100.1;transl_table=11
NC_007606.1	RefSeq	gene	2337298	2337783	.	-	.	ID=gene2486;Dbxref=GeneID:3797642;Name=SDY_2541;Note=SDY2541;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2541
NC_007606.1	RefSeq	CDS	2337298	2337783	.	-	0	ID=cds2211;Parent=gene2486;Dbxref=Genbank:YP_404101.1,GeneID:3797642;Name=YP_404101.1;Note=Code: T%3B COG: COG2062;gbkey=CDS;product=phosphohistidine phosphatase;protein_id=YP_404101.1;transl_table=11
NC_007606.1	RefSeq	gene	2337986	2340130	.	-	.	ID=gene2487;Dbxref=GeneID:3797643;Name=fadJ;Note=SDY2542;gbkey=Gene;gene=fadJ;gene_biotype=protein_coding;locus_tag=SDY_2542
NC_007606.1	RefSeq	CDS	2337986	2340130	.	-	0	ID=cds2212;Parent=gene2487;Dbxref=Genbank:YP_404102.1,GeneID:3797643;Name=YP_404102.1;Note=multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI%3B similar to FadA2B2 complex%3B involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate;gbkey=CDS;gene=fadJ;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=YP_404102.1;transl_table=11
NC_007606.1	RefSeq	gene	2340130	2341440	.	-	.	ID=gene2488;Dbxref=GeneID:3797644;Name=fadI;Note=SDY2543;gbkey=Gene;gene=fadI;gene_biotype=protein_coding;locus_tag=SDY_2543
NC_007606.1	RefSeq	CDS	2340130	2341440	.	-	0	ID=cds2213;Parent=gene2488;Dbxref=Genbank:YP_404103.1,GeneID:3797644;Name=YP_404103.1;Note=FadI%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadJ%3B similar to FadA2B2 complex%3B functions in beta-oxidation of fatty acids during anaerobic growth;gbkey=CDS;gene=fadI;product=3-ketoacyl-CoA thiolase;protein_id=YP_404103.1;transl_table=11
NC_007606.1	RefSeq	gene	2341621	2341929	.	-	.	ID=gene2489;Dbxref=GeneID:3797645;Name=SDY_2544;Note=SDY2544;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2544
NC_007606.1	RefSeq	CDS	2341621	2341929	.	-	0	ID=cds2214;Parent=gene2489;Dbxref=Genbank:YP_404104.1,GeneID:3797645;Name=YP_404104.1;Note=Code: S%3B COG: COG3691;gbkey=CDS;product=hypothetical protein;protein_id=YP_404104.1;transl_table=11
NC_007606.1	RefSeq	gene	2342270	2343616	.	+	.	ID=gene2490;Dbxref=GeneID:3797646;Name=fadL;Note=SDY2545;gbkey=Gene;gene=fadL;gene_biotype=protein_coding;locus_tag=SDY_2545
NC_007606.1	RefSeq	CDS	2342270	2343616	.	+	0	ID=cds2215;Parent=gene2490;Dbxref=Genbank:YP_404105.1,GeneID:3797646;Name=YP_404105.1;Note=Code: I%3B COG: COG2067;gbkey=CDS;gene=fadL;product=long-chain fatty acid outer membrane transporter;protein_id=YP_404105.1;transl_table=11
NC_007606.1	RefSeq	region	2343826	2344540	.	+	.	ID=id419;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2343883	2344155	.	+	.	ID=gene2491;Dbxref=GeneID:18263101;Name=SDY_4712;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4712
NC_007606.1	RefSeq	CDS	2343883	2344155	.	+	0	ID=cds2216;Parent=gene2491;Dbxref=Genbank:YP_009000787.1,GeneID:18263101;Name=YP_009000787.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000787.1;transl_table=11
NC_007606.1	RefSeq	gene	2344168	2344452	.	+	.	ID=gene2492;Dbxref=GeneID:3797648;Name=SDY_2547;Note=SDY2547;gbkey=Gene;gene_biotype=other;locus_tag=SDY_2547
NC_007606.1	RefSeq	region	2344541	2345308	.	-	.	ID=id420;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2344556	2344933	.	-	.	ID=gene2493;Dbxref=GeneID:3797649;Name=insB;Note=SDY2548;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2548
NC_007606.1	RefSeq	CDS	2344556	2344933	.	-	0	ID=cds2217;Parent=gene2493;Dbxref=Genbank:YP_404108.1,GeneID:3797649;Name=YP_404108.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404108.1;transl_table=11
NC_007606.1	RefSeq	gene	2344978	2345253	.	-	.	ID=gene2494;Dbxref=GeneID:3797650;Name=insA;Note=SDY2549;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2549
NC_007606.1	RefSeq	CDS	2344978	2345253	.	-	0	ID=cds2218;Parent=gene2494;Dbxref=Genbank:YP_404109.1,GeneID:3797650;Name=YP_404109.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404109.1;transl_table=11
NC_007606.1	RefSeq	gene	2346527	2347282	.	-	.	ID=gene2495;Dbxref=GeneID:3795635;Name=vacJ;Note=SDY2550;gbkey=Gene;gene=vacJ;gene_biotype=protein_coding;locus_tag=SDY_2550
NC_007606.1	RefSeq	CDS	2346527	2347282	.	-	0	ID=cds2219;Parent=gene2495;Dbxref=Genbank:YP_404110.1,GeneID:3795635;Name=YP_404110.1;Note=Code: M%3B COG: COG2853;gbkey=CDS;gene=vacJ;product=lipoprotein;protein_id=YP_404110.1;transl_table=11
NC_007606.1	RefSeq	gene	2347575	2348507	.	+	.	ID=gene2496;Dbxref=GeneID:3795636;Name=yfdC;Note=SDY2551;gbkey=Gene;gene=yfdC;gene_biotype=protein_coding;locus_tag=SDY_2551
NC_007606.1	RefSeq	CDS	2347575	2348507	.	+	0	ID=cds2220;Parent=gene2496;Dbxref=Genbank:YP_404111.1,GeneID:3795636;Name=YP_404111.1;Note=Code: P%3B COG: COG2116;gbkey=CDS;gene=yfdC;product=transporter;protein_id=YP_404111.1;transl_table=11
NC_007606.1	RefSeq	gene	2348583	2348657	.	+	.	ID=gene2497;Dbxref=GeneID:3795637;Name=SDY_2552;Note=SDY2552;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2552
NC_007606.1	RefSeq	tRNA	2348583	2348657	.	+	.	ID=rna43;Parent=gene2497;Dbxref=GeneID:3795637;codons=47;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	exon	2348583	2348657	.	+	.	ID=id421;Parent=rna43;Dbxref=GeneID:3795637;codons=47;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	region	2349109	2349876	.	-	.	ID=id422;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2349124	2349501	.	-	.	ID=gene2498;Dbxref=GeneID:3795638;Name=insB;Note=SDY2553;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2553
NC_007606.1	RefSeq	CDS	2349124	2349501	.	-	0	ID=cds2221;Parent=gene2498;Dbxref=Genbank:YP_404112.1,GeneID:3795638;Name=YP_404112.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404112.1;transl_table=11
NC_007606.1	RefSeq	gene	2349546	2349821	.	-	.	ID=gene2499;Dbxref=GeneID:3795639;Name=insA;Note=SDY2554;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2554
NC_007606.1	RefSeq	CDS	2349546	2349821	.	-	0	ID=cds2222;Parent=gene2499;Dbxref=Genbank:YP_404113.1,GeneID:3795639;Name=YP_404113.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404113.1;transl_table=11
NC_007606.1	RefSeq	gene	2349876	2351880	.	-	.	ID=gene2500;Dbxref=GeneID:3795641;Name=SDY_2556;Note=SDY2556%3B contains iso-IS1 insertion%3B original product: sucrose permease;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2556;pseudo=true
NC_007606.1	RefSeq	region	2350453	2351201	.	+	.	ID=id423;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2350792	2351187	.	+	.	ID=gene2501;Dbxref=GeneID:3795640;Name=SDY_2555;Note=SDY2555;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2555
NC_007606.1	RefSeq	CDS	2350792	2351187	.	+	0	ID=cds2223;Parent=gene2501;Dbxref=Genbank:YP_404114.1,GeneID:3795640;Name=YP_404114.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404114.1;transl_table=11
NC_007606.1	RefSeq	gene	2351952	2352882	.	-	.	ID=gene2502;Dbxref=GeneID:3795642;Name=SDY_2557;Note=SDY2557%3B frameshift and contains in-frame stop codon%3B original product:  fructokinase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2557;pseudo=true
NC_007606.1	RefSeq	gene	2353098	2354531	.	+	.	ID=gene2503;Dbxref=GeneID:3795643;Name=SDY_2558;Note=SDY2558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2558
NC_007606.1	RefSeq	CDS	2353098	2354531	.	+	0	ID=cds2224;Parent=gene2503;Dbxref=Genbank:YP_404115.1,GeneID:3795643;Name=YP_404115.1;Note=Code: G%3B COG: COG1621;gbkey=CDS;product=sucrose hydrolase;protein_id=YP_404115.1;transl_table=11
NC_007606.1	RefSeq	gene	2354539	2355534	.	-	.	ID=gene2504;Dbxref=GeneID:3795644;Name=SDY_2559;Note=SDY2559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2559
NC_007606.1	RefSeq	CDS	2354539	2355534	.	-	0	ID=cds2225;Parent=gene2504;Dbxref=Genbank:YP_404116.1,GeneID:3795644;Name=YP_404116.1;Note=Code: K%3B COG: COG1609;gbkey=CDS;product=sucrose operon repressor;protein_id=YP_404116.1;transl_table=11
NC_007606.1	RefSeq	gene	2355777	2355995	.	+	.	ID=gene2505;Dbxref=GeneID:3795645;Name=SDY_2560;Note=SDY2560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2560
NC_007606.1	RefSeq	CDS	2355777	2355995	.	+	0	ID=cds2226;Parent=gene2505;Dbxref=Genbank:YP_404117.1,GeneID:3795645;Name=YP_404117.1;gbkey=CDS;product=D-serine permease;protein_id=YP_404117.1;transl_table=11
NC_007606.1	RefSeq	gene	2356013	2357341	.	+	.	ID=gene2506;Dbxref=GeneID:3795646;Name=dsdA;Note=SDY2561;gbkey=Gene;gene=dsdA;gene_biotype=protein_coding;locus_tag=SDY_2561
NC_007606.1	RefSeq	CDS	2356013	2357341	.	+	0	ID=cds2227;Parent=gene2506;Dbxref=Genbank:YP_404118.1,GeneID:3795646;Name=YP_404118.1;Note=catalyzes the formation of pyruvate from serine;gbkey=CDS;gene=dsdA;product=D-serine dehydratase;protein_id=YP_404118.1;transl_table=11
NC_007606.1	RefSeq	gene	2357449	2358987	.	-	.	ID=gene2507;Dbxref=GeneID:3795647;Name=emrY;Note=SDY2562;gbkey=Gene;gene=emrY;gene_biotype=protein_coding;locus_tag=SDY_2562
NC_007606.1	RefSeq	CDS	2357449	2358987	.	-	0	ID=cds2228;Parent=gene2507;Dbxref=Genbank:YP_404119.1,GeneID:3795647;Name=YP_404119.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=emrY;product=multidrug resistance protein Y;protein_id=YP_404119.1;transl_table=11
NC_007606.1	RefSeq	gene	2358987	2360150	.	-	.	ID=gene2508;Dbxref=GeneID:3795648;Name=emrK;Note=SDY2563;gbkey=Gene;gene=emrK;gene_biotype=protein_coding;locus_tag=SDY_2563
NC_007606.1	RefSeq	CDS	2358987	2360150	.	-	0	ID=cds2229;Parent=gene2508;Dbxref=Genbank:YP_404120.1,GeneID:3795648;Name=YP_404120.1;Note=Code: V%3B COG: COG1566;gbkey=CDS;gene=emrK;product=multidrug resistance protein K;protein_id=YP_404120.1;transl_table=11
NC_007606.1	RefSeq	gene	2360566	2360907	.	+	.	ID=gene2509;Dbxref=GeneID:3795649;Name=SDY_2564;Note=SDY2564%3B contains iso-IS1 insertion%3B original product:  positive transcription regulator (sensor EvgS);gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2564;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	2360880	2361645	.	+	.	ID=id424;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2360937	2361209	.	+	.	ID=gene2510;Dbxref=GeneID:18263102;Name=SDY_4713;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4713
NC_007606.1	RefSeq	CDS	2360937	2361209	.	+	0	ID=cds2230;Parent=gene2510;Dbxref=Genbank:YP_009000788.1,GeneID:18263102;Name=YP_009000788.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000788.1;transl_table=11
NC_007606.1	RefSeq	gene	2361236	2361631	.	+	.	ID=gene2511;Dbxref=GeneID:3795650;Name=SDY_2565;Note=SDY2565;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2565
NC_007606.1	RefSeq	CDS	2361236	2361631	.	+	0	ID=cds2231;Parent=gene2511;Dbxref=Genbank:YP_404121.1,GeneID:3795650;Name=YP_404121.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404121.1;transl_table=11
NC_007606.1	RefSeq	gene	2361959	2364354	.	+	.	ID=gene2512;Dbxref=GeneID:3795651;Name=evgS;Note=SDY2566%3B contains iso-IS1 insertion%3B original product:  sensor for regulator EvgA;gbkey=Gene;gene=evgS;gene_biotype=pseudogene;locus_tag=SDY_2566;pseudo=true
NC_007606.1	RefSeq	region	2363171	2363943	.	-	.	ID=id425;gbkey=mobile_element;gene=evgS
NC_007606.1	RefSeq	gene	2363192	2363587	.	-	.	ID=gene2513;Dbxref=GeneID:3795652;Name=SDY_2567;Note=SDY2567;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2567
NC_007606.1	RefSeq	CDS	2363192	2363587	.	-	0	ID=cds2232;Parent=gene2513;Dbxref=Genbank:YP_404122.1,GeneID:3795652;Name=YP_404122.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404122.1;transl_table=11
NC_007606.1	RefSeq	gene	2363614	2363886	.	-	.	ID=gene2514;Dbxref=GeneID:18263103;Name=SDY_4714;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4714
NC_007606.1	RefSeq	CDS	2363614	2363886	.	-	0	ID=cds2233;Parent=gene2514;Dbxref=Genbank:YP_009000789.1,GeneID:18263103;Name=YP_009000789.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000789.1;transl_table=11
NC_007606.1	RefSeq	region	2364274	2365041	.	-	.	ID=id426;gbkey=mobile_element;gene=evgS
NC_007606.1	RefSeq	gene	2364711	2364986	.	-	.	ID=gene2515;Dbxref=GeneID:3797086;Name=insA;Note=SDY2568;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2568
NC_007606.1	RefSeq	CDS	2364711	2364986	.	-	0	ID=cds2234;Parent=gene2515;Dbxref=Genbank:YP_404123.1,GeneID:3797086;Name=YP_404123.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404123.1;transl_table=11
NC_007606.1	RefSeq	gene	2365253	2366437	.	-	.	ID=gene2516;Dbxref=GeneID:3797087;Name=yfdE;Note=SDY2569;gbkey=Gene;gene=yfdE;gene_biotype=protein_coding;locus_tag=SDY_2569
NC_007606.1	RefSeq	CDS	2365253	2366437	.	-	0	ID=cds2235;Parent=gene2516;Dbxref=Genbank:YP_404124.1,GeneID:3797087;Name=YP_404124.1;Note=Code: C%3B COG: COG1804;gbkey=CDS;gene=yfdE;product=hypothetical protein;protein_id=YP_404124.1;transl_table=11
NC_007606.1	RefSeq	gene	2366472	2367416	.	-	.	ID=gene2517;Dbxref=GeneID:3797088;Name=SDY_2570;Note=SDY2570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2570
NC_007606.1	RefSeq	CDS	2366472	2367416	.	-	0	ID=cds2236;Parent=gene2517;Dbxref=Genbank:YP_404125.1,GeneID:3797088;Name=YP_404125.1;Note=member of the AEC family of auxin efflux transporters%3B unknown function;gbkey=CDS;product=transporter YfdV;protein_id=YP_404125.1;transl_table=11
NC_007606.1	RefSeq	gene	2367486	2369180	.	-	.	ID=gene2518;Dbxref=GeneID:3797089;Name=SDY_2571;Note=SDY2571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2571
NC_007606.1	RefSeq	CDS	2367486	2369180	.	-	0	ID=cds2237;Parent=gene2518;Dbxref=Genbank:YP_404126.1,GeneID:3797089;Name=YP_404126.1;Note=catalyzes the formation of formyl-CoA from oxalyl-CoA;gbkey=CDS;product=oxalyl-CoA decarboxylase;protein_id=YP_404126.1;transl_table=11
NC_007606.1	RefSeq	gene	2369234	2370484	.	-	.	ID=gene2519;Dbxref=GeneID:3797090;Name=SDY_2572;Note=SDY2572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2572
NC_007606.1	RefSeq	CDS	2369234	2370484	.	-	0	ID=cds2238;Parent=gene2519;Dbxref=Genbank:YP_404127.1,GeneID:3797090;Name=YP_404127.1;Note=catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA;gbkey=CDS;product=formyl-coenzyme A transferase;protein_id=YP_404127.1;transl_table=11
NC_007606.1	RefSeq	gene	2370996	2371628	.	-	.	ID=gene2520;Dbxref=GeneID:3797091;Name=SDY_2573;Note=SDY2573;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2573
NC_007606.1	RefSeq	CDS	2370996	2371628	.	-	0	ID=cds2239;Parent=gene2520;Dbxref=Genbank:YP_404128.1,GeneID:3797091;Name=YP_404128.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404128.1;transl_table=11
NC_007606.1	RefSeq	gene	2371924	2372199	.	+	.	ID=gene2521;Dbxref=GeneID:3797092;Name=SDY_2574;Note=SDY2574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2574
NC_007606.1	RefSeq	CDS	2371924	2372199	.	+	0	ID=cds2240;Parent=gene2521;Dbxref=Genbank:YP_404129.1,GeneID:3797092;Name=YP_404129.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404129.1;transl_table=11
NC_007606.1	RefSeq	gene	2372276	2372518	.	-	.	ID=gene2522;Dbxref=GeneID:3797093;Name=SDY_2575;Note=SDY2575;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2575
NC_007606.1	RefSeq	CDS	2372276	2372518	.	-	0	ID=cds2241;Parent=gene2522;Dbxref=Genbank:YP_404130.1,GeneID:3797093;Name=YP_404130.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404130.1;transl_table=11
NC_007606.1	RefSeq	gene	2372871	2373791	.	+	.	ID=gene2523;Dbxref=GeneID:3797094;Name=ddg;Note=SDY2576;gbkey=Gene;gene=ddg;gene_biotype=protein_coding;locus_tag=SDY_2576
NC_007606.1	RefSeq	CDS	2372871	2373791	.	+	0	ID=cds2242;Parent=gene2523;Dbxref=Genbank:YP_404131.2,GeneID:3797094;Name=YP_404131.2;Note=Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock;gbkey=CDS;gene=ddg;product=lipid A biosynthesis palmitoleoyl acyltransferase;protein_id=YP_404131.2;transl_table=11
NC_007606.1	RefSeq	gene	2374284	2375522	.	-	.	ID=gene2524;Dbxref=GeneID:3797095;Name=SDY_2577;Note=SDY2577;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2577
NC_007606.1	RefSeq	CDS	2374284	2375522	.	-	0	ID=cds2243;Parent=gene2524;Dbxref=Genbank:YP_404132.1,GeneID:3797095;Name=YP_404132.1;Note=Code: E%3B COG: COG0436;gbkey=CDS;product=aminotransferase;protein_id=YP_404132.1;transl_table=11
NC_007606.1	RefSeq	gene	2375602	2375847	.	-	.	ID=gene2525;Dbxref=GeneID:3797096;Name=SDY_2578;Note=SDY2578;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2578
NC_007606.1	RefSeq	CDS	2375602	2375847	.	-	0	ID=cds2244;Parent=gene2525;Dbxref=Genbank:YP_404133.1,GeneID:3797096;Name=YP_404133.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404133.1;transl_table=11
NC_007606.1	RefSeq	gene	2375899	2377596	.	+	.	ID=gene2526;Dbxref=GeneID:3797097;Name=SDY_2579;Note=SDY2579;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2579
NC_007606.1	RefSeq	CDS	2375899	2377596	.	+	0	ID=cds2245;Parent=gene2526;Dbxref=Genbank:YP_404134.1,GeneID:3797097;Name=YP_404134.1;Note=Code: T%3B COG: COG3275;gbkey=CDS;product=sensor protein;protein_id=YP_404134.1;transl_table=11
NC_007606.1	RefSeq	gene	2377611	2378345	.	+	.	ID=gene2527;Dbxref=GeneID:3797098;Name=SDY_2580;Note=SDY2580%3B contains in-frame stop codon%3B original product:  2-component transcriptional regulator;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2580;pseudo=true
NC_007606.1	RefSeq	gene	2378358	2379165	.	+	.	ID=gene2528;Dbxref=GeneID:3797099;Name=SDY_2581;Note=SDY2581%3B frameshift%3B original product:  ARAC-type regulatory protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2581;pseudo=true
NC_007606.1	RefSeq	gene	2379168	2381586	.	-	.	ID=gene2529;Dbxref=GeneID:3797100;Name=SDY_2582;Note=''SDY2582%3B frameshift%3B original product:  PTS system enzyme IIA component%2C enzyme I'';gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2582;pseudo=true
NC_007606.1	RefSeq	gene	2381611	2382648	.	-	.	ID=gene2530;Dbxref=GeneID:3797101;Name=SDY_2583;Note=SDY2583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2583
NC_007606.1	RefSeq	CDS	2381611	2382648	.	-	0	ID=cds2246;Parent=gene2530;Dbxref=Genbank:YP_404135.1,GeneID:3797101;Name=YP_404135.1;Note=metalloprotein;gbkey=CDS;product=exoaminopeptidase;protein_id=YP_404135.1;transl_table=11
NC_007606.1	RefSeq	gene	2382648	2383562	.	-	.	ID=gene2531;Dbxref=GeneID:3797102;Name=SDY_2584;Note=SDY2584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2584
NC_007606.1	RefSeq	CDS	2382648	2383562	.	-	0	ID=cds2247;Parent=gene2531;Dbxref=Genbank:YP_404136.1,GeneID:3797102;Name=YP_404136.1;Note=Code: E%3B COG: COG0006;gbkey=CDS;product=peptidase;protein_id=YP_404136.1;transl_table=11
NC_007606.1	RefSeq	gene	2383577	2384824	.	-	.	ID=gene2532;Dbxref=GeneID:3797103;Name=SDY_2585;Note=SDY2585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2585
NC_007606.1	RefSeq	CDS	2383577	2384824	.	-	0	ID=cds2248;Parent=gene2532;Dbxref=Genbank:YP_404137.1,GeneID:3797103;Name=YP_404137.1;Note=Code: G%3B COG: COG1299;gbkey=CDS;product=transport protein;protein_id=YP_404137.1;transl_table=11
NC_007606.1	RefSeq	gene	2384846	2385172	.	-	.	ID=gene2533;Dbxref=GeneID:3797104;Name=SDY_2586;Note=SDY2586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2586
NC_007606.1	RefSeq	CDS	2384846	2385172	.	-	0	ID=cds2249;Parent=gene2533;Dbxref=Genbank:YP_404138.1,GeneID:3797104;Name=YP_404138.1;Note=Code: G%3B COG: COG1445;gbkey=CDS;product=PTS system transporter subunit IIB;protein_id=YP_404138.1;transl_table=11
NC_007606.1	RefSeq	gene	2385391	2386356	.	-	.	ID=gene2534;Dbxref=GeneID:3797105;Name=glk;Note=SDY2587;gbkey=Gene;gene=glk;gene_biotype=protein_coding;locus_tag=SDY_2587
NC_007606.1	RefSeq	CDS	2385391	2386356	.	-	0	ID=cds2250;Parent=gene2534;Dbxref=Genbank:YP_404139.1,GeneID:3797105;Name=YP_404139.1;Note=catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate;gbkey=CDS;gene=glk;product=glucokinase;protein_id=YP_404139.1;transl_table=11
NC_007606.1	RefSeq	gene	2386735	2387973	.	-	.	ID=gene2535;Dbxref=GeneID:3798544;Name=SDY_2588;Note=SDY2588;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2588
NC_007606.1	RefSeq	CDS	2386735	2387973	.	-	0	ID=cds2251;Parent=gene2535;Dbxref=Genbank:YP_404140.1,GeneID:3798544;Name=YP_404140.1;Note=Code: P%3B COG: COG1914;gbkey=CDS;product=manganese transport protein MntH;protein_id=YP_404140.1;transl_table=11
NC_007606.1	RefSeq	region	2388225	2389415	.	+	.	ID=id427;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2388271	2388681	.	+	.	ID=gene2536;Dbxref=GeneID:3798545;Name=SDY_2589;Note=SDY2589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2589
NC_007606.1	RefSeq	CDS	2388271	2388681	.	+	0	ID=cds2252;Parent=gene2536;Dbxref=Genbank:YP_404141.1,GeneID:3798545;Name=YP_404141.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_404141.1;transl_table=11
NC_007606.1	RefSeq	region	2389397	2390181	.	-	.	ID=id428;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2389430	2389645	.	-	.	ID=gene2537;Dbxref=GeneID:3798547;Name=SDY_2591;Note=SDY2591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2591
NC_007606.1	RefSeq	CDS	2389430	2389645	.	-	0	ID=cds2253;Parent=gene2537;Dbxref=Genbank:YP_404143.1,GeneID:3798547;Name=YP_404143.1;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404143.1;transl_table=11
NC_007606.1	RefSeq	gene	2389852	2390124	.	-	.	ID=gene2538;Dbxref=GeneID:18263104;Name=SDY_4715;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4715
NC_007606.1	RefSeq	CDS	2389852	2390124	.	-	0	ID=cds2254;Parent=gene2538;Dbxref=Genbank:YP_009000790.1,GeneID:18263104;Name=YP_009000790.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000790.1;transl_table=11
NC_007606.1	RefSeq	region	2390182	2390329	.	+	.	ID=id429;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2390420	2391622	.	+	.	ID=gene2539;Dbxref=GeneID:3798549;Name=nupC;Note=SDY2593;gbkey=Gene;gene=nupC;gene_biotype=protein_coding;locus_tag=SDY_2593
NC_007606.1	RefSeq	CDS	2390420	2391622	.	+	0	ID=cds2255;Parent=gene2539;Dbxref=Genbank:YP_404145.1,GeneID:3798549;Name=YP_404145.1;Note=Code: F%3B COG: COG1972;gbkey=CDS;gene=nupC;product=nucleosides transporter;protein_id=YP_404145.1;transl_table=11
NC_007606.1	RefSeq	gene	2391671	2393884	.	-	.	ID=gene2540;Dbxref=GeneID:3798550;Name=yfeA;Note=''SDY2594%3B contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yfeA;gene_biotype=pseudogene;locus_tag=SDY_2594;pseudo=true
NC_007606.1	RefSeq	gene	2393975	2394050	.	-	.	ID=gene2541;Dbxref=GeneID:3798551;Name=SDY_2595;Note=SDY2595;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2595
NC_007606.1	RefSeq	tRNA	2393975	2394050	.	-	.	ID=rna44;Parent=gene2541;Dbxref=GeneID:3798551;codons=53;gbkey=tRNA;product=tRNA-Ala
NC_007606.1	RefSeq	exon	2393975	2394050	.	-	.	ID=id430;Parent=rna44;Dbxref=GeneID:3798551;codons=53;gbkey=tRNA;product=tRNA-Ala
NC_007606.1	RefSeq	gene	2394271	2394630	.	+	.	ID=gene2542;Dbxref=GeneID:3798552;Name=yfeC;Note=SDY2596;gbkey=Gene;gene=yfeC;gene_biotype=protein_coding;locus_tag=SDY_2596
NC_007606.1	RefSeq	CDS	2394271	2394630	.	+	0	ID=cds2256;Parent=gene2542;Dbxref=Genbank:YP_404146.1,GeneID:3798552;Name=YP_404146.1;gbkey=CDS;gene=yfeC;product=hypothetical protein;protein_id=YP_404146.1;transl_table=11
NC_007606.1	RefSeq	gene	2394632	2395024	.	+	.	ID=gene2543;Dbxref=GeneID:3798553;Name=yfeD;Note=SDY2597;gbkey=Gene;gene=yfeD;gene_biotype=protein_coding;locus_tag=SDY_2597
NC_007606.1	RefSeq	CDS	2394632	2395024	.	+	0	ID=cds2257;Parent=gene2543;Dbxref=Genbank:YP_404147.1,GeneID:3798553;Name=YP_404147.1;gbkey=CDS;gene=yfeD;product=hypothetical protein;protein_id=YP_404147.1;transl_table=11
NC_007606.1	RefSeq	gene	2395064	2396272	.	-	.	ID=gene2544;Dbxref=GeneID:3798554;Name=SDY_2598;Note=SDY2598;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2598
NC_007606.1	RefSeq	CDS	2395064	2396272	.	-	0	ID=cds2258;Parent=gene2544;Dbxref=Genbank:YP_404148.1,GeneID:3798554;Name=YP_404148.1;Note=Code: L%3B COG: COG0675;gbkey=CDS;product=virulence protein;protein_id=YP_404148.1;transl_table=11
NC_007606.1	RefSeq	gene	2396280	2396822	.	+	.	ID=gene2545;Dbxref=GeneID:3798555;Name=SDY_2599;Note=SDY2599;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2599
NC_007606.1	RefSeq	CDS	2396280	2396822	.	+	0	ID=cds2259;Parent=gene2545;Dbxref=Genbank:YP_404149.1,GeneID:3798555;Name=YP_404149.1;Note=Code: L%3B COG: COG1943;gbkey=CDS;product=transposase TnA;protein_id=YP_404149.1;transl_table=11
NC_007606.1	RefSeq	gene	2396823	2398238	.	-	.	ID=gene2546;Dbxref=GeneID:3798556;Name=gltX;Note=SDY2600;gbkey=Gene;gene=gltX;gene_biotype=protein_coding;locus_tag=SDY_2600
NC_007606.1	RefSeq	CDS	2396823	2398238	.	-	0	ID=cds2260;Parent=gene2546;Dbxref=Genbank:YP_404150.1,GeneID:3798556;Name=YP_404150.1;Note=Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation;gbkey=CDS;gene=gltX;product=glutamyl-tRNA synthetase;protein_id=YP_404150.1;transl_table=11
NC_007606.1	RefSeq	gene	2398497	2398572	.	+	.	ID=gene2547;Dbxref=GeneID:3798557;Name=SDY_2601;Note=SDY2601;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2601
NC_007606.1	RefSeq	tRNA	2398497	2398572	.	+	.	ID=rna45;Parent=gene2547;Dbxref=GeneID:3798557;codons=50;gbkey=tRNA;product=tRNA-Val
NC_007606.1	RefSeq	exon	2398497	2398572	.	+	.	ID=id431;Parent=rna45;Dbxref=GeneID:3798557;codons=50;gbkey=tRNA;product=tRNA-Val
NC_007606.1	RefSeq	gene	2398616	2398691	.	+	.	ID=gene2548;Dbxref=GeneID:3798558;Name=SDY_2602;Note=SDY2602;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2602
NC_007606.1	RefSeq	tRNA	2398616	2398691	.	+	.	ID=rna46;Parent=gene2548;Dbxref=GeneID:3798558;codons=50;gbkey=tRNA;product=tRNA-Val
NC_007606.1	RefSeq	exon	2398616	2398691	.	+	.	ID=id432;Parent=rna46;Dbxref=GeneID:3798558;codons=50;gbkey=tRNA;product=tRNA-Val
NC_007606.1	RefSeq	gene	2398696	2398771	.	+	.	ID=gene2549;Dbxref=GeneID:3798559;Name=SDY_2603;Note=SDY2603;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2603
NC_007606.1	RefSeq	tRNA	2398696	2398771	.	+	.	ID=rna47;Parent=gene2549;Dbxref=GeneID:3798559;codons=42;gbkey=tRNA;product=tRNA-Lys
NC_007606.1	RefSeq	exon	2398696	2398771	.	+	.	ID=id433;Parent=rna47;Dbxref=GeneID:3798559;codons=42;gbkey=tRNA;product=tRNA-Lys
NC_007606.1	RefSeq	gene	2399046	2399387	.	+	.	ID=gene2550;Dbxref=GeneID:3799788;Name=flxA;Note=SDY2604;gbkey=Gene;gene=flxA;gene_biotype=protein_coding;locus_tag=SDY_2604
NC_007606.1	RefSeq	CDS	2399046	2399387	.	+	0	ID=cds2261;Parent=gene2550;Dbxref=Genbank:YP_404151.1,GeneID:3799788;Name=YP_404151.1;gbkey=CDS;gene=flxA;product=hypothetical protein;protein_id=YP_404151.1;transl_table=11
NC_007606.1	RefSeq	gene	2399378	2400304	.	-	.	ID=gene2551;Dbxref=GeneID:3799789;Name=yfeR;Note=SDY2605%3B contains in-frame stop codon%3B original product:  transcriptional regulator LYSR-type;gbkey=Gene;gene=yfeR;gene_biotype=pseudogene;locus_tag=SDY_2605;pseudo=true
NC_007606.1	RefSeq	gene	2400394	2401392	.	+	.	ID=gene2552;Dbxref=GeneID:3799790;Name=yfeH;Note=SDY2606;gbkey=Gene;gene=yfeH;gene_biotype=protein_coding;locus_tag=SDY_2606
NC_007606.1	RefSeq	CDS	2400394	2401392	.	+	0	ID=cds2262;Parent=gene2552;Dbxref=Genbank:YP_404152.1,GeneID:3799790;Name=YP_404152.1;Note=Code: R%3B COG: COG0385;gbkey=CDS;gene=yfeH;product=cytochrome oxidase;protein_id=YP_404152.1;transl_table=11
NC_007606.1	RefSeq	gene	2401389	2401607	.	-	.	ID=gene2553;Dbxref=GeneID:3799791;Name=SDY_2607;Note=SDY2607;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2607
NC_007606.1	RefSeq	CDS	2401389	2401607	.	-	0	ID=cds2263;Parent=gene2553;Dbxref=Genbank:YP_404153.1,GeneID:3799791;Name=YP_404153.1;Note=Code: S%3B COG: COG3530;gbkey=CDS;product=hypothetical protein;protein_id=YP_404153.1;transl_table=11
NC_007606.1	RefSeq	gene	2401609	2403624	.	-	.	ID=gene2554;Dbxref=GeneID:3799792;Name=ligA;Note=SDY2608;gbkey=Gene;gene=ligA;gene_biotype=protein_coding;locus_tag=SDY_2608
NC_007606.1	RefSeq	CDS	2401609	2403624	.	-	0	ID=cds2264;Parent=gene2554;Dbxref=Genbank:YP_404154.1,GeneID:3799792;Name=YP_404154.1;Note=this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction%3B essential for DNA replication and repair of damaged DNA%3B similar to ligase LigB;gbkey=CDS;gene=ligA;product=NAD-dependent DNA ligase LigA;protein_id=YP_404154.1;transl_table=11
NC_007606.1	RefSeq	gene	2403695	2404693	.	-	.	ID=gene2555;Dbxref=GeneID:3799793;Name=zipA;Note=SDY2609;gbkey=Gene;gene=zipA;gene_biotype=protein_coding;locus_tag=SDY_2609
NC_007606.1	RefSeq	CDS	2403695	2404693	.	-	0	ID=cds2265;Parent=gene2555;Dbxref=Genbank:YP_404155.1,GeneID:3799793;Name=YP_404155.1;Note=interacts with cell division protein FitsZ and may be required to anchor septal ring structure;gbkey=CDS;gene=zipA;product=cell division protein ZipA;protein_id=YP_404155.1;transl_table=11
NC_007606.1	RefSeq	gene	2404923	2405684	.	+	.	ID=gene2556;Dbxref=GeneID:3799794;Name=cysZ;Note=SDY2610;gbkey=Gene;gene=cysZ;gene_biotype=protein_coding;locus_tag=SDY_2610
NC_007606.1	RefSeq	CDS	2404923	2405684	.	+	0	ID=cds2266;Parent=gene2556;Dbxref=Genbank:YP_404156.1,GeneID:3799794;Name=YP_404156.1;Note=role in sulfur assimilation;gbkey=CDS;gene=cysZ;product=sulfate transport protein CysZ;protein_id=YP_404156.1;transl_table=11
NC_007606.1	RefSeq	gene	2405869	2406840	.	+	.	ID=gene2557;Dbxref=GeneID:3799795;Name=cysK;Note=SDY2611;gbkey=Gene;gene=cysK;gene_biotype=protein_coding;locus_tag=SDY_2611
NC_007606.1	RefSeq	CDS	2405869	2406840	.	+	0	ID=cds2267;Parent=gene2557;Dbxref=Genbank:YP_404157.1,GeneID:3799795;Name=YP_404157.1;Note=CysK%3B forms a complex with serine acetyltransferase CysE%3B functions in cysteine biosynthesis;gbkey=CDS;gene=cysK;product=cysteine synthase A;protein_id=YP_404157.1;transl_table=11
NC_007606.1	RefSeq	gene	2407224	2407481	.	+	.	ID=gene2558;Dbxref=GeneID:3799796;Name=ptsH;Note=SDY2612;gbkey=Gene;gene=ptsH;gene_biotype=protein_coding;locus_tag=SDY_2612
NC_007606.1	RefSeq	CDS	2407224	2407481	.	+	0	ID=cds2268;Parent=gene2558;Dbxref=Genbank:YP_404158.1,GeneID:3799796;Name=YP_404158.1;Note=Code: G%3B COG: COG1925;gbkey=CDS;gene=ptsH;product=phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr);protein_id=YP_404158.1;transl_table=11
NC_007606.1	RefSeq	gene	2407526	2409253	.	+	.	ID=gene2559;Dbxref=GeneID:3799797;Name=ptsI;Note=SDY2613;gbkey=Gene;gene=ptsI;gene_biotype=protein_coding;locus_tag=SDY_2613
NC_007606.1	RefSeq	CDS	2407526	2409253	.	+	0	ID=cds2269;Parent=gene2559;Dbxref=Genbank:YP_404159.1,GeneID:3799797;Name=YP_404159.1;Note=''Phosphotransferase system%2C enzyme I%3B transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein%3B part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS)%2C a major carbohydrate active-transport system'';gbkey=CDS;gene=ptsI;product=phosphoenolpyruvate-protein phosphotransferase;protein_id=YP_404159.1;transl_table=11
NC_007606.1	RefSeq	gene	2409294	2409803	.	+	.	ID=gene2560;Dbxref=GeneID:3799798;Name=crr;Note=SDY2614;gbkey=Gene;gene=crr;gene_biotype=protein_coding;locus_tag=SDY_2614
NC_007606.1	RefSeq	CDS	2409294	2409803	.	+	0	ID=cds2270;Parent=gene2560;Dbxref=Genbank:YP_404160.1,GeneID:3799798;Name=YP_404160.1;Note=functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system%3B functions in the transport and phosphorylation of glucose;gbkey=CDS;gene=crr;product=PTS system glucose-specific transporter subunit IIA;protein_id=YP_404160.1;transl_table=11
NC_007606.1	RefSeq	gene	2409846	2410697	.	-	.	ID=gene2561;Dbxref=GeneID:3799799;Name=pdxK;Note=SDY2615;gbkey=Gene;gene=pdxK;gene_biotype=protein_coding;locus_tag=SDY_2615
NC_007606.1	RefSeq	CDS	2409846	2410697	.	-	0	ID=cds2271;Parent=gene2561;Dbxref=Genbank:YP_404161.1,GeneID:3799799;Name=YP_404161.1;Note=catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal;gbkey=CDS;gene=pdxK;product=pyridoxal kinase;protein_id=YP_404161.1;transl_table=11
NC_007606.1	RefSeq	gene	2410802	2411170	.	+	.	ID=gene2562;Dbxref=GeneID:3799800;Name=yfeK;Note=SDY2616;gbkey=Gene;gene=yfeK;gene_biotype=protein_coding;locus_tag=SDY_2616
NC_007606.1	RefSeq	CDS	2410802	2411170	.	+	0	ID=cds2272;Parent=gene2562;Dbxref=Genbank:YP_404162.1,GeneID:3799800;Name=YP_404162.1;gbkey=CDS;gene=yfeK;product=hypothetical protein;protein_id=YP_404162.1;transl_table=11
NC_007606.1	RefSeq	gene	2411173	2412084	.	-	.	ID=gene2563;Dbxref=GeneID:3799801;Name=cysM;Note=SDY2617;gbkey=Gene;gene=cysM;gene_biotype=protein_coding;locus_tag=SDY_2617
NC_007606.1	RefSeq	CDS	2411173	2412084	.	-	0	ID=cds2273;Parent=gene2563;Dbxref=Genbank:YP_404163.1,GeneID:3799801;Name=YP_404163.1;Note=catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide;gbkey=CDS;gene=cysM;product=cysteine synthase B;protein_id=YP_404163.1;transl_table=11
NC_007606.1	RefSeq	gene	2412218	2413315	.	-	.	ID=gene2564;Dbxref=GeneID:3799802;Name=cysA;Note=SDY2618;gbkey=Gene;gene=cysA;gene_biotype=protein_coding;locus_tag=SDY_2618
NC_007606.1	RefSeq	CDS	2412218	2413315	.	-	0	ID=cds2274;Parent=gene2564;Dbxref=Genbank:YP_404164.1,GeneID:3799802;Name=YP_404164.1;Note=Code: P%3B COG: COG1118;gbkey=CDS;gene=cysA;product=sulfate/thiosulfate ABC transporter ATP-binding protein;protein_id=YP_404164.1;transl_table=11
NC_007606.1	RefSeq	gene	2413305	2414180	.	-	.	ID=gene2565;Dbxref=GeneID:3799803;Name=cysW;Note=SDY2619;gbkey=Gene;gene=cysW;gene_biotype=protein_coding;locus_tag=SDY_2619
NC_007606.1	RefSeq	CDS	2413305	2414180	.	-	0	ID=cds2275;Parent=gene2565;Dbxref=Genbank:YP_404165.1,GeneID:3799803;Name=YP_404165.1;Note=Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import;gbkey=CDS;gene=cysW;product=sulfate/thiosulfate ABC transporter substrate-binding protein;protein_id=YP_404165.1;transl_table=11
NC_007606.1	RefSeq	gene	2414180	2415013	.	-	.	ID=gene2566;Dbxref=GeneID:3799804;Name=cysU;Note=SDY2620;gbkey=Gene;gene=cysU;gene_biotype=protein_coding;locus_tag=SDY_2620
NC_007606.1	RefSeq	CDS	2414180	2415013	.	-	0	ID=cds2276;Parent=gene2566;Dbxref=Genbank:YP_404166.1,GeneID:3799804;Name=YP_404166.1;Note=Code: O%3B COG: COG0555;gbkey=CDS;gene=cysU;product=sulfate/thiosulfate transporter permease;protein_id=YP_404166.1;transl_table=11
NC_007606.1	RefSeq	gene	2415013	2416029	.	-	.	ID=gene2567;Dbxref=GeneID:3799805;Name=cysP;Note=SDY2621;gbkey=Gene;gene=cysP;gene_biotype=protein_coding;locus_tag=SDY_2621
NC_007606.1	RefSeq	CDS	2415013	2416029	.	-	0	ID=cds2277;Parent=gene2567;Dbxref=Genbank:YP_404167.1,GeneID:3799805;Name=YP_404167.1;Note=Code: P%3B COG: COG4150;gbkey=CDS;gene=cysP;product=thiosulfate transporter extracellular solute-binding protein;protein_id=YP_404167.1;transl_table=11
NC_007606.1	RefSeq	gene	2416333	2417124	.	-	.	ID=gene2568;Dbxref=GeneID:3797949;Name=ucpA;Note=SDY2622;gbkey=Gene;gene=ucpA;gene_biotype=protein_coding;locus_tag=SDY_2622
NC_007606.1	RefSeq	CDS	2416333	2417124	.	-	0	ID=cds2278;Parent=gene2568;Dbxref=Genbank:YP_404168.2,GeneID:3797949;Name=YP_404168.2;Note=Code: IQR%3B COG: COG1028;gbkey=CDS;gene=ucpA;product=short chain dehydrogenase;protein_id=YP_404168.2;transl_table=11
NC_007606.1	RefSeq	gene	2417253	2418110	.	-	.	ID=gene2569;Dbxref=GeneID:3797950;Name=yfeT;Note=SDY2623;gbkey=Gene;gene=yfeT;gene_biotype=protein_coding;locus_tag=SDY_2623
NC_007606.1	RefSeq	CDS	2417253	2418110	.	-	0	ID=cds2279;Parent=gene2569;Dbxref=Genbank:YP_404169.1,GeneID:3797950;Name=YP_404169.1;Note=Code: K%3B COG: COG1737;gbkey=CDS;gene=yfeT;product=hypothetical protein;protein_id=YP_404169.1;transl_table=11
NC_007606.1	RefSeq	gene	2418274	2419170	.	+	.	ID=gene2570;Dbxref=GeneID:3797951;Name=murQ;Note=SDY2624;gbkey=Gene;gene=murQ;gene_biotype=protein_coding;gene_synonym=yfeU;locus_tag=SDY_2624
NC_007606.1	RefSeq	CDS	2418274	2419170	.	+	0	ID=cds2280;Parent=gene2570;Dbxref=Genbank:YP_404170.1,GeneID:3797951;Name=YP_404170.1;Note=catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate%3B involved in MurNAc dissimilation pathway;gbkey=CDS;gene=murQ;product=N-acetylmuramic acid 6-phosphate etherase;protein_id=YP_404170.1;transl_table=11
NC_007606.1	RefSeq	gene	2419174	2420598	.	+	.	ID=gene2571;Dbxref=GeneID:3797952;Name=murP;Note=SDY2625;gbkey=Gene;gene=murP;gene_biotype=protein_coding;gene_synonym=yfeV;locus_tag=SDY_2625
NC_007606.1	RefSeq	CDS	2419174	2420598	.	+	0	ID=cds2281;Parent=gene2571;Dbxref=Genbank:YP_404171.1,GeneID:3797952;Name=YP_404171.1;Note=belongs to PEP-dependent PTS system%3B contains the PTS EIIBC domains%3B involved in uptake of exogenous N-acetylmuramic acid (MurNAc)%3B requires crr-encoded enzyme IIA-glucose component;gbkey=CDS;gene=murP;product=N-acetylmuramic acid phosphotransfer permease;protein_id=YP_404171.1;transl_table=11
NC_007606.1	RefSeq	gene	2420516	2422680	.	+	.	ID=gene2572;Dbxref=GeneID:3797953;Name=SDY_2626;Note=SDY2626%3B contains iso-IS1 insertion%3B original product:  beta-lactamase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2626;pseudo=true
NC_007606.1	RefSeq	region	2421510	2422274	.	-	.	ID=id434;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2421945	2422217	.	-	.	ID=gene2573;Dbxref=GeneID:18263105;Name=SDY_4716;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4716
NC_007606.1	RefSeq	CDS	2421945	2422217	.	-	0	ID=cds2282;Parent=gene2573;Dbxref=Genbank:YP_009000791.1,GeneID:18263105;Name=YP_009000791.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000791.1;transl_table=11
NC_007606.1	RefSeq	gene	2422738	2423664	.	-	.	ID=gene2574;Dbxref=GeneID:3797956;Name=SDY_2629;Note=SDY2629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2629
NC_007606.1	RefSeq	CDS	2422738	2423664	.	-	0	ID=cds2283;Parent=gene2574;Dbxref=Genbank:YP_404174.1,GeneID:3797956;Name=YP_404174.1;Note=Code: P%3B COG: COG2837;gbkey=CDS;product=hypothetical protein;protein_id=YP_404174.1;transl_table=11
NC_007606.1	RefSeq	gene	2423733	2424308	.	-	.	ID=gene2575;Dbxref=GeneID:3797957;Name=SDY_2630;Note=SDY2630;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2630
NC_007606.1	RefSeq	CDS	2423733	2424308	.	-	0	ID=cds2284;Parent=gene2575;Dbxref=Genbank:YP_404175.1,GeneID:3797957;Name=YP_404175.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404175.1;transl_table=11
NC_007606.1	RefSeq	gene	2424369	2424824	.	-	.	ID=gene2576;Dbxref=GeneID:3797958;Name=SDY_2631;Note=SDY2631;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2631
NC_007606.1	RefSeq	CDS	2424369	2424824	.	-	0	ID=cds2285;Parent=gene2576;Dbxref=Genbank:YP_404176.1,GeneID:3797958;Name=YP_404176.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404176.1;transl_table=11
NC_007606.1	RefSeq	gene	2424805	2425230	.	-	.	ID=gene2577;Dbxref=GeneID:3797959;Name=SDY_2632;Note=SDY2632;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2632
NC_007606.1	RefSeq	CDS	2424805	2425230	.	-	0	ID=cds2286;Parent=gene2577;Dbxref=Genbank:YP_404177.2,GeneID:3797959;Name=YP_404177.2;Note=Code: R%3B COG: COG0456;gbkey=CDS;product=acetyltransferase;protein_id=YP_404177.2;transl_table=11
NC_007606.1	RefSeq	gene	2425444	2426313	.	+	.	ID=gene2578;Dbxref=GeneID:3797960;Name=amiA;Note=SDY2633;gbkey=Gene;gene=amiA;gene_biotype=protein_coding;locus_tag=SDY_2633
NC_007606.1	RefSeq	CDS	2425444	2426313	.	+	0	ID=cds2287;Parent=gene2578;Dbxref=Genbank:YP_404178.1,GeneID:3797960;Name=YP_404178.1;Note=Code: M%3B COG: COG0860;gbkey=CDS;gene=amiA;product=N-acetylmuramoyl-L-alanine amidase;protein_id=YP_404178.1;transl_table=11
NC_007606.1	RefSeq	gene	2426317	2427216	.	+	.	ID=gene2579;Dbxref=GeneID:3797961;Name=hemF;Note=SDY2634;gbkey=Gene;gene=hemF;gene_biotype=protein_coding;locus_tag=SDY_2634
NC_007606.1	RefSeq	CDS	2426317	2427216	.	+	0	ID=cds2288;Parent=gene2579;Dbxref=Genbank:YP_404179.1,GeneID:3797961;Name=YP_404179.1;Note=catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis;gbkey=CDS;gene=hemF;product=coproporphyrinogen III oxidase;protein_id=YP_404179.1;transl_table=11
NC_007606.1	RefSeq	gene	2427222	2428274	.	-	.	ID=gene2580;Dbxref=GeneID:3797962;Name=yfeG;Note=SDY2635;gbkey=Gene;gene=yfeG;gene_biotype=protein_coding;locus_tag=SDY_2635
NC_007606.1	RefSeq	CDS	2427222	2428274	.	-	0	ID=cds2289;Parent=gene2580;Dbxref=Genbank:YP_404180.1,GeneID:3797962;Name=YP_404180.1;Note=activates the transcription of the ethanolamine utilization operon;gbkey=CDS;gene=yfeG;product=transcriptional regulator EutR;protein_id=YP_404180.1;transl_table=11
NC_007606.1	RefSeq	gene	2428320	2428826	.	-	.	ID=gene2581;Dbxref=GeneID:3797963;Name=SDY_2636;Note=SDY2636;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2636
NC_007606.1	RefSeq	CDS	2428320	2428826	.	-	0	ID=cds2290;Parent=gene2581;Dbxref=Genbank:YP_404181.1,GeneID:3797963;Name=YP_404181.1;Note=Code: QC%3B COG: COG4577;gbkey=CDS;product=hypothetical protein;protein_id=YP_404181.1;transl_table=11
NC_007606.1	RefSeq	gene	2428833	2429492	.	-	.	ID=gene2582;Dbxref=GeneID:3797964;Name=SDY_2637;Note=SDY2637;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2637
NC_007606.1	RefSeq	CDS	2428833	2429492	.	-	0	ID=cds2291;Parent=gene2582;Dbxref=Genbank:YP_404182.1,GeneID:3797964;Name=YP_404182.1;Note=Code: E%3B COG: COG4816;gbkey=CDS;product=hypothetical protein;protein_id=YP_404182.1;transl_table=11
NC_007606.1	RefSeq	gene	2429502	2430389	.	-	.	ID=gene2583;Dbxref=GeneID:3797965;Name=eutC;Note=SDY2638;gbkey=Gene;gene=eutC;gene_biotype=protein_coding;locus_tag=SDY_2638
NC_007606.1	RefSeq	CDS	2429502	2430389	.	-	0	ID=cds2292;Parent=gene2583;Dbxref=Genbank:YP_404183.1,GeneID:3797965;Name=YP_404183.1;Note=catalyzes the formation of acetaldehyde from ethanolamine;gbkey=CDS;gene=eutC;product=ethanolamine ammonia-lyase small subunit;protein_id=YP_404183.1;transl_table=11
NC_007606.1	RefSeq	gene	2430410	2431138	.	-	.	ID=gene2584;Dbxref=GeneID:3797966;Name=eutB;Note=''SDY2639%3B truncated%3B original product: ethanolamine ammonia-lyase%2C heavy chain'';gbkey=Gene;gene=eutB;gene_biotype=pseudogene;locus_tag=SDY_2639;pseudo=true
NC_007606.1	RefSeq	region	2431153	2431917	.	+	.	ID=id435;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2431210	2431482	.	+	.	ID=gene2585;Dbxref=GeneID:18263106;Name=SDY_4717;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4717
NC_007606.1	RefSeq	CDS	2431210	2431482	.	+	0	ID=cds2293;Parent=gene2585;Dbxref=Genbank:YP_009000792.1,GeneID:18263106;Name=YP_009000792.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000792.1;transl_table=11
NC_007606.1	RefSeq	gene	2431984	2432648	.	-	.	ID=gene2586;Dbxref=GeneID:3797295;Name=SDY_2642;Note=SDY2642;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2642;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	2432238	2433004	.	-	.	ID=id436;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2432675	2432947	.	-	.	ID=gene2587;Dbxref=GeneID:18263107;Name=SDY_4718;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4718
NC_007606.1	RefSeq	CDS	2432675	2432947	.	-	0	ID=cds2294;Parent=gene2587;Dbxref=Genbank:YP_009000793.1,GeneID:18263107;Name=YP_009000793.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000793.1;transl_table=11
NC_007606.1	RefSeq	gene	2432843	2433073	.	+	.	ID=gene2588;Dbxref=GeneID:3797297;Name=SDY_2644;Note=SDY2644;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2644
NC_007606.1	RefSeq	CDS	2432843	2433073	.	+	0	ID=cds2295;Parent=gene2588;Dbxref=Genbank:YP_404188.1,GeneID:3797297;Name=YP_404188.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404188.1;transl_table=11
NC_007606.1	RefSeq	gene	2433384	2435663	.	-	.	ID=gene2589;Dbxref=GeneID:3797298;Name=SDY_2645;Note=SDY2645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2645
NC_007606.1	RefSeq	CDS	2433384	2435663	.	-	0	ID=cds2296;Parent=gene2589;Dbxref=Genbank:YP_404189.1,GeneID:3797298;Name=YP_404189.1;Note=NADP-dependent%3B catalyzes the oxidative decarboxylation of malate to form pyruvate%3B decarboxylates oxaloacetate;gbkey=CDS;product=malic enzyme;protein_id=YP_404189.1;transl_table=11
NC_007606.1	RefSeq	gene	2435952	2436902	.	+	.	ID=gene2590;Dbxref=GeneID:3797299;Name=talA;Note=SDY2646%3B contains in-frame stop codon%3B original product: transaldolase A;gbkey=Gene;gene=talA;gene_biotype=pseudogene;locus_tag=SDY_2646;pseudo=true
NC_007606.1	RefSeq	gene	2436922	2437906	.	+	.	ID=gene2591;Dbxref=GeneID:3797300;Name=tktB;Note=SDY2647%3B contains iso-IS1 insertion%3B original product: transketolase 2 isozyme;gbkey=Gene;gene=tktB;gene_biotype=pseudogene;locus_tag=SDY_2647;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	2437889	2438654	.	-	.	ID=id437;gbkey=mobile_element;gene=tktB
NC_007606.1	RefSeq	gene	2437903	2438298	.	-	.	ID=gene2592;Dbxref=GeneID:3797301;Name=SDY_2648;Note=SDY2648;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2648;pseudogene=unknown
NC_007606.1	RefSeq	CDS	2437903	2438298	.	-	0	ID=cds2297;Parent=gene2592;Dbxref=Genbank:YP_404190.1,GeneID:3797301;Name=YP_404190.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404190.1;transl_table=11
NC_007606.1	RefSeq	gene	2438325	2438597	.	-	.	ID=gene2593;Dbxref=GeneID:18263108;Name=SDY_4719;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4719
NC_007606.1	RefSeq	CDS	2438325	2438597	.	-	0	ID=cds2298;Parent=gene2593;Dbxref=Genbank:YP_009000794.1,GeneID:18263108;Name=YP_009000794.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000794.1;transl_table=11
NC_007606.1	RefSeq	gene	2439779	2440846	.	-	.	ID=gene2594;Dbxref=GeneID:3797302;Name=SDY_2649;Note=SDY2649;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2649
NC_007606.1	RefSeq	CDS	2439779	2440846	.	-	0	ID=cds2299;Parent=gene2594;Dbxref=Genbank:YP_404191.1,GeneID:3797302;Name=YP_404191.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404191.1;transl_table=11
NC_007606.1	RefSeq	gene	2440972	2441547	.	-	.	ID=gene2595;Dbxref=GeneID:3797303;Name=yffH;Note=SDY2650;gbkey=Gene;gene=yffH;gene_biotype=protein_coding;locus_tag=SDY_2650
NC_007606.1	RefSeq	CDS	2440972	2441547	.	-	0	ID=cds2300;Parent=gene2595;Dbxref=Genbank:YP_404192.1,GeneID:3797303;Name=YP_404192.1;Note=Code: LR%3B COG: COG0494;gbkey=CDS;gene=yffH;product=hypothetical protein;protein_id=YP_404192.1;transl_table=11
NC_007606.1	RefSeq	gene	2441615	2443594	.	-	.	ID=gene2596;Dbxref=GeneID:3797304;Name=yffG;Note=SDY2651;gbkey=Gene;gene=yffG;gene_biotype=protein_coding;locus_tag=SDY_2651
NC_007606.1	RefSeq	CDS	2441615	2443594	.	-	0	ID=cds2301;Parent=gene2596;Dbxref=Genbank:YP_404193.1,GeneID:3797304;Name=YP_404193.1;Note=''unknown function%3B in E. coli the aegA gene is regulated by Fnr%2C NarXL%2C and NarQ (but not ArcA)%2C induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic)'';gbkey=CDS;gene=yffG;product=oxidoreductase Fe-S binding subunit;protein_id=YP_404193.1;transl_table=11
NC_007606.1	RefSeq	region	2443612	2444377	.	-	.	ID=id438;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2443626	2444021	.	-	.	ID=gene2597;Dbxref=GeneID:3797305;Name=SDY_2652;Note=SDY2652;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2652
NC_007606.1	RefSeq	CDS	2443626	2444021	.	-	0	ID=cds2302;Parent=gene2597;Dbxref=Genbank:YP_404194.1,GeneID:3797305;Name=YP_404194.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404194.1;transl_table=11
NC_007606.1	RefSeq	gene	2444048	2444320	.	-	.	ID=gene2598;Dbxref=GeneID:18263109;Name=SDY_4720;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4720
NC_007606.1	RefSeq	CDS	2444048	2444320	.	-	0	ID=cds2303;Parent=gene2598;Dbxref=Genbank:YP_009000795.1,GeneID:18263109;Name=YP_009000795.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000795.1;transl_table=11
NC_007606.1	RefSeq	gene	2444574	2446274	.	+	.	ID=gene2599;Dbxref=GeneID:3797306;Name=narQ;Note=SDY2653;gbkey=Gene;gene=narQ;gene_biotype=protein_coding;locus_tag=SDY_2653
NC_007606.1	RefSeq	CDS	2444574	2446274	.	+	0	ID=cds2304;Parent=gene2599;Dbxref=Genbank:YP_404195.1,GeneID:3797306;Name=YP_404195.1;Note=Code: T%3B COG: COG3850;gbkey=CDS;gene=narQ;product=nitrate/nitrite sensor protein NarQ;protein_id=YP_404195.1;transl_table=11
NC_007606.1	RefSeq	gene	2446438	2449551	.	+	.	ID=gene2600;Dbxref=GeneID:3797307;Name=acrD;Note=SDY2654;gbkey=Gene;gene=acrD;gene_biotype=protein_coding;locus_tag=SDY_2654
NC_007606.1	RefSeq	CDS	2446438	2449551	.	+	0	ID=cds2305;Parent=gene2600;Dbxref=Genbank:YP_404196.1,GeneID:3797307;Name=YP_404196.1;Note=Code: V%3B COG: COG0841;gbkey=CDS;gene=acrD;product=aminoglycoside/multidrug efflux system;protein_id=YP_404196.1;transl_table=11
NC_007606.1	RefSeq	gene	2450090	2450446	.	+	.	ID=gene2601;Dbxref=GeneID:3797308;Name=yffB;Note=SDY2655;gbkey=Gene;gene=yffB;gene_biotype=protein_coding;locus_tag=SDY_2655
NC_007606.1	RefSeq	CDS	2450090	2450446	.	+	0	ID=cds2306;Parent=gene2601;Dbxref=Genbank:YP_404197.1,GeneID:3797308;Name=YP_404197.1;Note=Code: P%3B COG: COG1393;gbkey=CDS;gene=yffB;product=hypothetical protein;protein_id=YP_404197.1;transl_table=11
NC_007606.1	RefSeq	gene	2450450	2451577	.	+	.	ID=gene2602;Dbxref=GeneID:3797309;Name=dapE;Note=SDY2656;gbkey=Gene;gene=dapE;gene_biotype=protein_coding;locus_tag=SDY_2656
NC_007606.1	RefSeq	CDS	2450450	2451577	.	+	0	ID=cds2307;Parent=gene2602;Dbxref=Genbank:YP_404198.1,GeneID:3797309;Name=YP_404198.1;Note=''dapE-encoded N-succinyl-L%2CL-diaminopimelic acid desuccinylase (DapE)%2C catalyzes the hydrolysis of N-succinyl-L%2CLdiaminopimelate L%2CL-SDAP to L%2CL-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.'';gbkey=CDS;gene=dapE;product=succinyl-diaminopimelate desuccinylase;protein_id=YP_404198.1;transl_table=11
NC_007606.1	RefSeq	gene	2451605	2451805	.	+	.	ID=gene2603;Dbxref=GeneID:3797310;Name=SDY_2657;Note=SDY2657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2657
NC_007606.1	RefSeq	CDS	2451605	2451805	.	+	0	ID=cds2308;Parent=gene2603;Dbxref=Genbank:YP_404199.2,GeneID:3797310;Name=YP_404199.2;gbkey=CDS;product=hypothetical protein;protein_id=YP_404199.2;transl_table=11
NC_007606.1	RefSeq	gene	2451886	2452585	.	-	.	ID=gene2604;Dbxref=GeneID:3797311;Name=SDY_2658;Note=SDY2658;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2658;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	2452653	2453423	.	-	.	ID=id439;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2452667	2453062	.	-	.	ID=gene2605;Dbxref=GeneID:3797313;Name=SDY_2660;Note=SDY2660;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2660
NC_007606.1	RefSeq	CDS	2452667	2453062	.	-	0	ID=cds2309;Parent=gene2605;Dbxref=Genbank:YP_404202.1,GeneID:3797313;Name=YP_404202.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404202.1;transl_table=11
NC_007606.1	RefSeq	gene	2453089	2453361	.	-	.	ID=gene2606;Dbxref=GeneID:18263110;Name=SDY_4721;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4721
NC_007606.1	RefSeq	CDS	2453089	2453361	.	-	0	ID=cds2310;Parent=gene2606;Dbxref=Genbank:YP_009000796.1,GeneID:18263110;Name=YP_009000796.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000796.1;transl_table=11
NC_007606.1	RefSeq	gene	2453433	2455448	.	-	.	ID=gene2607;Dbxref=GeneID:3798579;Name=ypfI;Note=SDY2661;gbkey=Gene;gene=ypfI;gene_biotype=protein_coding;locus_tag=SDY_2661
NC_007606.1	RefSeq	CDS	2453433	2455448	.	-	0	ID=cds2311;Parent=gene2607;Dbxref=Genbank:YP_404203.1,GeneID:3798579;Name=YP_404203.1;Note=Code: R%3B COG: COG1444;gbkey=CDS;gene=ypfI;product=hypothetical protein;protein_id=YP_404203.1;transl_table=11
NC_007606.1	RefSeq	gene	2455463	2456326	.	-	.	ID=gene2608;Dbxref=GeneID:3798580;Name=SDY_2662;Note=SDY2662;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2662;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2456494	2457207	.	-	.	ID=gene2609;Dbxref=GeneID:3798582;Name=purC;Note=SDY2664;gbkey=Gene;gene=purC;gene_biotype=protein_coding;locus_tag=SDY_2664
NC_007606.1	RefSeq	CDS	2456494	2457207	.	-	0	ID=cds2312;Parent=gene2609;Dbxref=Genbank:YP_404206.1,GeneID:3798582;Name=YP_404206.1;Note=catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis%3B SAICAR synthase;gbkey=CDS;gene=purC;product=phosphoribosylaminoimidazole-succinocarboxamide synthase;protein_id=YP_404206.1;transl_table=11
NC_007606.1	RefSeq	gene	2457420	2458457	.	-	.	ID=gene2610;Dbxref=GeneID:3798584;Name=nlpB;Note=SDY2666;gbkey=Gene;gene=nlpB;gene_biotype=protein_coding;locus_tag=SDY_2666
NC_007606.1	RefSeq	CDS	2457420	2458457	.	-	0	ID=cds2313;Parent=gene2610;Dbxref=Genbank:YP_404208.1,GeneID:3798584;Name=YP_404208.1;Note=Code: M%3B COG: COG3317;gbkey=CDS;gene=nlpB;product=lipoprotein;protein_id=YP_404208.1;transl_table=11
NC_007606.1	RefSeq	gene	2458471	2459349	.	-	.	ID=gene2611;Dbxref=GeneID:3798585;Name=dapA;Note=SDY2667;gbkey=Gene;gene=dapA;gene_biotype=protein_coding;locus_tag=SDY_2667
NC_007606.1	RefSeq	CDS	2458471	2459349	.	-	0	ID=cds2314;Parent=gene2611;Dbxref=Genbank:YP_404209.1,GeneID:3798585;Name=YP_404209.1;Note=catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis;gbkey=CDS;gene=dapA;product=dihydrodipicolinate synthase;protein_id=YP_404209.1;transl_table=11
NC_007606.1	RefSeq	gene	2459495	2460067	.	+	.	ID=gene2612;Dbxref=GeneID:3798586;Name=gcvR;Note=SDY2668;gbkey=Gene;gene=gcvR;gene_biotype=protein_coding;locus_tag=SDY_2668
NC_007606.1	RefSeq	CDS	2459495	2460067	.	+	0	ID=cds2315;Parent=gene2612;Dbxref=Genbank:YP_404210.2,GeneID:3798586;Name=YP_404210.2;Note=negative transcriptional regulator of the gcvTHP operon;gbkey=CDS;gene=gcvR;product=glycine cleavage system transcriptional repressor;protein_id=YP_404210.2;transl_table=11
NC_007606.1	RefSeq	gene	2460067	2460537	.	+	.	ID=gene2613;Dbxref=GeneID:3798587;Name=bcp;Note=SDY2669;gbkey=Gene;gene=bcp;gene_biotype=protein_coding;locus_tag=SDY_2669
NC_007606.1	RefSeq	CDS	2460067	2460537	.	+	0	ID=cds2316;Parent=gene2613;Dbxref=Genbank:YP_404211.1,GeneID:3798587;Name=YP_404211.1;Note=bacterioferritin comigratory protein%3B thiol peroxidase%3B thioredoxin-dependent%3B hydroperoxide peroxidase%3B in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide%3B contains an active site cysteine;gbkey=CDS;gene=bcp;product=thioredoxin-dependent thiol peroxidase;protein_id=YP_404211.1;transl_table=11
NC_007606.1	RefSeq	gene	2460751	2461407	.	+	.	ID=gene2614;Dbxref=GeneID:3798588;Name=hyfA;Note=SDY2670;gbkey=Gene;gene=hyfA;gene_biotype=protein_coding;locus_tag=SDY_2670
NC_007606.1	RefSeq	CDS	2460751	2461407	.	+	0	ID=cds2317;Parent=gene2614;Dbxref=Genbank:YP_404212.1,GeneID:3798588;Name=YP_404212.1;Note=Code: C%3B COG: COG1142;gbkey=CDS;gene=hyfA;product=hydrogenase 4 Fe-S subunit;protein_id=YP_404212.1;transl_table=11
NC_007606.1	RefSeq	gene	2461407	2463425	.	+	.	ID=gene2615;Dbxref=GeneID:3798589;Name=hyfB;Note=SDY2671;gbkey=Gene;gene=hyfB;gene_biotype=protein_coding;locus_tag=SDY_2671
NC_007606.1	RefSeq	CDS	2461407	2463425	.	+	0	ID=cds2318;Parent=gene2615;Dbxref=Genbank:YP_404213.1,GeneID:3798589;Name=YP_404213.1;Note=Code: CP%3B COG: COG0651;gbkey=CDS;gene=hyfB;product=hydrogenase 4 subunit B;protein_id=YP_404213.1;transl_table=11
NC_007606.1	RefSeq	gene	2463415	2464383	.	+	.	ID=gene2616;Dbxref=GeneID:3798590;Name=hyfC;Note=SDY2672;gbkey=Gene;gene=hyfC;gene_biotype=protein_coding;locus_tag=SDY_2672
NC_007606.1	RefSeq	CDS	2463415	2464383	.	+	0	ID=cds2319;Parent=gene2616;Dbxref=Genbank:YP_404214.1,GeneID:3798590;Name=YP_404214.1;Note=Code: C%3B COG: COG0650;gbkey=CDS;gene=hyfC;product=hydrogenase 4 membrane subunit;protein_id=YP_404214.1;transl_table=11
NC_007606.1	RefSeq	gene	2464400	2465839	.	+	.	ID=gene2617;Dbxref=GeneID:3798591;Name=hyfD;Note=SDY2673%3B contains in-frame stop codon%3B original product: hydrogenase 4 membrane subunit;gbkey=Gene;gene=hyfD;gene_biotype=pseudogene;locus_tag=SDY_2673;pseudo=true
NC_007606.1	RefSeq	gene	2465851	2466501	.	+	.	ID=gene2618;Dbxref=GeneID:3798592;Name=hyfE;Note=SDY2674;gbkey=Gene;gene=hyfE;gene_biotype=protein_coding;locus_tag=SDY_2674
NC_007606.1	RefSeq	CDS	2465851	2466501	.	+	0	ID=cds2320;Parent=gene2618;Dbxref=Genbank:YP_404215.1,GeneID:3798592;Name=YP_404215.1;Note=interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide;gbkey=CDS;gene=hyfE;product=hydrogenase 4 membrane subunit;protein_id=YP_404215.1;transl_table=11
NC_007606.1	RefSeq	gene	2466506	2468086	.	+	.	ID=gene2619;Dbxref=GeneID:3798593;Name=hyfF;Note=SDY2675;gbkey=Gene;gene=hyfF;gene_biotype=protein_coding;locus_tag=SDY_2675
NC_007606.1	RefSeq	CDS	2466506	2468086	.	+	0	ID=cds2321;Parent=gene2619;Dbxref=Genbank:YP_404216.1,GeneID:3798593;Name=YP_404216.1;Note=Code: CP%3B COG: COG0651;gbkey=CDS;gene=hyfF;product=hydrogenase 4 subunit F;protein_id=YP_404216.1;transl_table=11
NC_007606.1	RefSeq	gene	2468076	2469791	.	+	.	ID=gene2620;Dbxref=GeneID:3798594;Name=hyfG;Note=SDY2676;gbkey=Gene;gene=hyfG;gene_biotype=protein_coding;locus_tag=SDY_2676
NC_007606.1	RefSeq	CDS	2468076	2469791	.	+	0	ID=cds2322;Parent=gene2620;Dbxref=Genbank:YP_404217.1,GeneID:3798594;Name=YP_404217.1;Note=Code: C%3B COG: COG3261;gbkey=CDS;gene=hyfG;product=hydrogenase 4 subunit G;protein_id=YP_404217.1;transl_table=11
NC_007606.1	RefSeq	gene	2469801	2470346	.	+	.	ID=gene2621;Dbxref=GeneID:3798595;Name=hyfH;Note=SDY2677%3B contains in-frame stop codon%3B original product: hydrogenase 4 Fe-S subunit;gbkey=Gene;gene=hyfH;gene_biotype=pseudogene;locus_tag=SDY_2677;pseudo=true
NC_007606.1	RefSeq	gene	2470343	2471101	.	+	.	ID=gene2622;Dbxref=GeneID:3798596;Name=hyfI;Note=SDY2678;gbkey=Gene;gene=hyfI;gene_biotype=protein_coding;locus_tag=SDY_2678
NC_007606.1	RefSeq	CDS	2470343	2471101	.	+	0	ID=cds2323;Parent=gene2622;Dbxref=Genbank:YP_404218.1,GeneID:3798596;Name=YP_404218.1;Note=Code: C%3B COG: COG3260;gbkey=CDS;gene=hyfI;product=hydrogenase 4 Fe-S subunit;protein_id=YP_404218.1;transl_table=11
NC_007606.1	RefSeq	gene	2471031	2471507	.	+	.	ID=gene2623;Dbxref=GeneID:3798597;Name=SDY_2679;Note=SDY2679;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2679
NC_007606.1	RefSeq	CDS	2471031	2471507	.	+	0	ID=cds2324;Parent=gene2623;Dbxref=Genbank:YP_404219.1,GeneID:3798597;Name=YP_404219.1;gbkey=CDS;product=protein processing element;protein_id=YP_404219.1;transl_table=11
NC_007606.1	RefSeq	gene	2471558	2473549	.	+	.	ID=gene2624;Dbxref=GeneID:3798598;Name=hyfR;Note=''SDY2680%3B contains in-frame stop codon%3B original product:  2-component regulator%2C interaction with sigma 54'';gbkey=Gene;gene=hyfR;gene_biotype=pseudogene;locus_tag=SDY_2680;pseudo=true
NC_007606.1	RefSeq	gene	2473571	2474419	.	+	.	ID=gene2625;Dbxref=GeneID:3798099;Name=focB;Note=SDY2681;gbkey=Gene;gene=focB;gene_biotype=protein_coding;locus_tag=SDY_2681
NC_007606.1	RefSeq	CDS	2473571	2474419	.	+	0	ID=cds2325;Parent=gene2625;Dbxref=Genbank:YP_404220.1,GeneID:3798099;Name=YP_404220.1;Note=inner membrane protein presumed to act as a formate transporter%3B member of the hyf operon;gbkey=CDS;gene=focB;product=formate transporter;protein_id=YP_404220.1;transl_table=11
NC_007606.1	RefSeq	gene	2474457	2475518	.	-	.	ID=gene2626;Dbxref=GeneID:3798100;Name=perM;Note=SDY2682;gbkey=Gene;gene=perM;gene_biotype=protein_coding;locus_tag=SDY_2682
NC_007606.1	RefSeq	CDS	2474457	2475518	.	-	0	ID=cds2326;Parent=gene2626;Dbxref=Genbank:YP_404221.1,GeneID:3798100;Name=YP_404221.1;Note=Code: R%3B COG: COG0628;gbkey=CDS;gene=perM;product=permease;protein_id=YP_404221.1;transl_table=11
NC_007606.1	RefSeq	gene	2475732	2477195	.	+	.	ID=gene2627;Dbxref=GeneID:3798101;Name=SDY_2683;Note=SDY2683;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2683
NC_007606.1	RefSeq	CDS	2475732	2477195	.	+	0	ID=cds2327;Parent=gene2627;Dbxref=Genbank:YP_404222.1,GeneID:3798101;Name=YP_404222.1;Note=Code: R%3B COG: COG4783;gbkey=CDS;product=hypothetical protein;protein_id=YP_404222.1;transl_table=11
NC_007606.1	RefSeq	gene	2477216	2477575	.	+	.	ID=gene2628;Dbxref=GeneID:3798102;Name=SDY_2684;Note=SDY2684;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2684
NC_007606.1	RefSeq	CDS	2477216	2477575	.	+	0	ID=cds2328;Parent=gene2628;Dbxref=Genbank:YP_404223.1,GeneID:3798102;Name=YP_404223.1;Note=Code: P%3B COG: COG1393;gbkey=CDS;product=oxidoreductase;protein_id=YP_404223.1;transl_table=11
NC_007606.1	RefSeq	gene	2477713	2478459	.	-	.	ID=gene2629;Dbxref=GeneID:3798103;Name=SDY_2685;Note=SDY2685;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2685
NC_007606.1	RefSeq	CDS	2477713	2478459	.	-	0	ID=cds2329;Parent=gene2629;Dbxref=Genbank:YP_404224.1,GeneID:3798103;Name=YP_404224.1;Note=''controls initiation of DNA replication by inhibiting re-initiation of replication%2C promotes hydrolysis of DnaA-bound ATP'';gbkey=CDS;product=DNA replication initiation factor;protein_id=YP_404224.1;transl_table=11
NC_007606.1	RefSeq	gene	2478509	2479798	.	-	.	ID=gene2630;Dbxref=GeneID:3798104;Name=uraA;Note=SDY2686;gbkey=Gene;gene=uraA;gene_biotype=protein_coding;locus_tag=SDY_2686
NC_007606.1	RefSeq	CDS	2478509	2479798	.	-	0	ID=cds2330;Parent=gene2630;Dbxref=Genbank:YP_404225.1,GeneID:3798104;Name=YP_404225.1;Note=Code: F%3B COG: COG2233;gbkey=CDS;gene=uraA;product=uracil transporter;protein_id=YP_404225.1;transl_table=11
NC_007606.1	RefSeq	gene	2479884	2480510	.	-	.	ID=gene2631;Dbxref=GeneID:3798105;Name=upp;Note=SDY2687;gbkey=Gene;gene=upp;gene_biotype=protein_coding;locus_tag=SDY_2687
NC_007606.1	RefSeq	CDS	2479884	2480510	.	-	0	ID=cds2331;Parent=gene2631;Dbxref=Genbank:YP_404226.2,GeneID:3798105;Name=YP_404226.2;Note=Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate;gbkey=CDS;gene=upp;product=uracil phosphoribosyltransferase;protein_id=YP_404226.2;transl_table=11
NC_007606.1	RefSeq	gene	2480836	2481873	.	+	.	ID=gene2632;Dbxref=GeneID:3798106;Name=purM;Note=SDY2688;gbkey=Gene;gene=purM;gene_biotype=protein_coding;locus_tag=SDY_2688
NC_007606.1	RefSeq	CDS	2480836	2481873	.	+	0	ID=cds2332;Parent=gene2632;Dbxref=Genbank:YP_404227.1,GeneID:3798106;Name=YP_404227.1;Note=catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis;gbkey=CDS;gene=purM;product=phosphoribosylaminoimidazole synthetase;protein_id=YP_404227.1;transl_table=11
NC_007606.1	RefSeq	gene	2481873	2482511	.	+	.	ID=gene2633;Dbxref=GeneID:3798107;Name=purN;Note=SDY2689;gbkey=Gene;gene=purN;gene_biotype=protein_coding;locus_tag=SDY_2689
NC_007606.1	RefSeq	CDS	2481873	2482511	.	+	0	ID=cds2333;Parent=gene2633;Dbxref=Genbank:YP_404228.1,GeneID:3798107;Name=YP_404228.1;Note=glycinamide ribonucleotide transformylase%3B GAR Tfase%3B catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate%3B PurN requires formyl folate for the reaction unlike PurT which uses formate;gbkey=CDS;gene=purN;product=phosphoribosylglycinamide formyltransferase;protein_id=YP_404228.1;transl_table=11
NC_007606.1	RefSeq	gene	2482682	2484748	.	+	.	ID=gene2634;Dbxref=GeneID:3798108;Name=ppk;Note=SDY2690;gbkey=Gene;gene=ppk;gene_biotype=protein_coding;locus_tag=SDY_2690
NC_007606.1	RefSeq	CDS	2482682	2484748	.	+	0	ID=cds2334;Parent=gene2634;Dbxref=Genbank:YP_404229.1,GeneID:3798108;Name=YP_404229.1;Note=catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate;gbkey=CDS;gene=ppk;product=polyphosphate kinase;protein_id=YP_404229.1;transl_table=11
NC_007606.1	RefSeq	gene	2484753	2486294	.	+	.	ID=gene2635;Dbxref=GeneID:3798109;Name=ppx;Note=SDY2691;gbkey=Gene;gene=ppx;gene_biotype=protein_coding;locus_tag=SDY_2691
NC_007606.1	RefSeq	CDS	2484753	2486294	.	+	0	ID=cds2335;Parent=gene2635;Dbxref=Genbank:YP_404230.1,GeneID:3798109;Name=YP_404230.1;Note=Code: FP%3B COG: COG0248;gbkey=CDS;gene=ppx;product=exopolyphosphatase;protein_id=YP_404230.1;transl_table=11
NC_007606.1	RefSeq	gene	2486333	2488500	.	-	.	ID=gene2636;Dbxref=GeneID:3798110;Name=SDY_2692;Note=SDY2692%3B frameshift%3B original product:  cytochrome C-type biogenesis protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2692;pseudo=true
NC_007606.1	RefSeq	region	2488567	2489332	.	-	.	ID=id440;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2488581	2488976	.	-	.	ID=gene2637;Dbxref=GeneID:3798111;Name=SDY_2693;Note=SDY2693;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2693
NC_007606.1	RefSeq	CDS	2488581	2488976	.	-	0	ID=cds2336;Parent=gene2637;Dbxref=Genbank:YP_404231.2,GeneID:3798111;Name=YP_404231.2;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404231.2;transl_table=11
NC_007606.1	RefSeq	gene	2489003	2489275	.	-	.	ID=gene2638;Dbxref=GeneID:18263111;Name=SDY_4722;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4722
NC_007606.1	RefSeq	CDS	2489003	2489275	.	-	0	ID=cds2337;Parent=gene2638;Dbxref=Genbank:YP_009000797.1,GeneID:18263111;Name=YP_009000797.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000797.1;transl_table=11
NC_007606.1	RefSeq	region	2489473	2490223	.	-	.	ID=id441;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2489488	2489883	.	-	.	ID=gene2639;Dbxref=GeneID:3798113;Name=SDY_2695;Note=SDY2695;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2695
NC_007606.1	RefSeq	CDS	2489488	2489883	.	-	0	ID=cds2338;Parent=gene2639;Dbxref=Genbank:YP_404233.1,GeneID:3798113;Name=YP_404233.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404233.1;transl_table=11
NC_007606.1	RefSeq	gene	2489910	2490137	.	-	.	ID=gene2640;Dbxref=GeneID:18263112;Name=SDY_4723;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4723
NC_007606.1	RefSeq	CDS	2489910	2490137	.	-	0	ID=cds2339;Parent=gene2640;Dbxref=Genbank:YP_009000798.1,GeneID:18263112;Name=YP_009000798.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000798.1;transl_table=11
NC_007606.1	RefSeq	gene	2490459	2490650	.	+	.	ID=gene2641;Dbxref=GeneID:3798114;Name=SDY_2696;Note=SDY2696;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2696
NC_007606.1	RefSeq	CDS	2490459	2490650	.	+	0	ID=cds2340;Parent=gene2641;Dbxref=Genbank:YP_404234.1,GeneID:3798114;Name=YP_404234.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404234.1;transl_table=11
NC_007606.1	RefSeq	region	2490964	2491730	.	+	.	ID=id442;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2491021	2491293	.	+	.	ID=gene2642;Dbxref=GeneID:18263113;Name=SDY_4724;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4724
NC_007606.1	RefSeq	CDS	2491021	2491293	.	+	0	ID=cds2341;Parent=gene2642;Dbxref=Genbank:YP_009000799.1,GeneID:18263113;Name=YP_009000799.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000799.1;transl_table=11
NC_007606.1	RefSeq	gene	2491320	2491715	.	+	.	ID=gene2643;Dbxref=GeneID:3798116;Name=SDY_2698;Note=SDY2698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2698
NC_007606.1	RefSeq	CDS	2491320	2491715	.	+	0	ID=cds2342;Parent=gene2643;Dbxref=Genbank:YP_404236.1,GeneID:3798116;Name=YP_404236.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404236.1;transl_table=11
NC_007606.1	RefSeq	gene	2491735	2492265	.	+	.	ID=gene2644;Dbxref=GeneID:3798117;Name=SDY_2699;Note=SDY2699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2699
NC_007606.1	RefSeq	CDS	2491735	2492265	.	+	0	ID=cds2343;Parent=gene2644;Dbxref=Genbank:YP_404237.1,GeneID:3798117;Name=YP_404237.1;Note=Code: M%3B COG: COG3133;gbkey=CDS;product=outer membrane lipoprotein;protein_id=YP_404237.1;transl_table=11
NC_007606.1	RefSeq	region	2492225	2493555	.	-	.	ID=id443;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2492236	2493141	.	-	.	ID=gene2645;Dbxref=GeneID:3798802;Name=SDY_2700;Note=SDY2700;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2700
NC_007606.1	RefSeq	CDS	2492236	2493141	.	-	0	ID=cds2344;Parent=gene2645;Dbxref=Genbank:YP_404238.2,GeneID:3798802;Name=YP_404238.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_404238.2;transl_table=11
NC_007606.1	RefSeq	gene	2493099	2493464	.	-	.	ID=gene2646;Dbxref=GeneID:3798803;Name=SDY_2701;Note=SDY2701;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2701
NC_007606.1	RefSeq	CDS	2493099	2493464	.	-	0	ID=cds2345;Parent=gene2646;Dbxref=Genbank:YP_404239.1,GeneID:3798803;Name=YP_404239.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_404239.1;transl_table=11
NC_007606.1	RefSeq	gene	2493605	2494144	.	+	.	ID=gene2647;Dbxref=GeneID:3798804;Name=SDY_2702;Note=SDY2702;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2702
NC_007606.1	RefSeq	CDS	2493605	2494144	.	+	0	ID=cds2346;Parent=gene2647;Dbxref=Genbank:YP_404240.1,GeneID:3798804;Name=YP_404240.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404240.1;transl_table=11
NC_007606.1	RefSeq	gene	2494237	2495814	.	-	.	ID=gene2648;Dbxref=GeneID:3798805;Name=guaA;Note=SDY2703;gbkey=Gene;gene=guaA;gene_biotype=protein_coding;locus_tag=SDY_2703
NC_007606.1	RefSeq	CDS	2494237	2495814	.	-	0	ID=cds2347;Parent=gene2648;Dbxref=Genbank:YP_404241.1,GeneID:3798805;Name=YP_404241.1;Note=contains glutamine-hydrolyzing domain and glutamine amidotransferase%3B GMP-binding domain%3B functions to produce GMP from XMP in the IMP pathway;gbkey=CDS;gene=guaA;product=GMP synthase;protein_id=YP_404241.1;transl_table=11
NC_007606.1	RefSeq	gene	2495883	2497349	.	-	.	ID=gene2649;Dbxref=GeneID:3798806;Name=guaB;Note=SDY2704;gbkey=Gene;gene=guaB;gene_biotype=protein_coding;locus_tag=SDY_2704
NC_007606.1	RefSeq	CDS	2495883	2497349	.	-	0	ID=cds2348;Parent=gene2649;Dbxref=Genbank:YP_404242.1,GeneID:3798806;Name=YP_404242.1;Note=catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate;gbkey=CDS;gene=guaB;product=inosine 5'-monophosphate dehydrogenase;protein_id=YP_404242.1;transl_table=11
NC_007606.1	RefSeq	gene	2497511	2498881	.	+	.	ID=gene2650;Dbxref=GeneID:3798807;Name=xseA;Note=SDY2705;gbkey=Gene;gene=xseA;gene_biotype=protein_coding;locus_tag=SDY_2705
NC_007606.1	RefSeq	CDS	2497511	2498881	.	+	0	ID=cds2349;Parent=gene2650;Dbxref=Genbank:YP_404243.1,GeneID:3798807;Name=YP_404243.1;Note=bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides;gbkey=CDS;gene=xseA;product=exodeoxyribonuclease VII large subunit;protein_id=YP_404243.1;transl_table=11
NC_007606.1	RefSeq	gene	2498878	2499114	.	-	.	ID=gene2651;Dbxref=GeneID:3798808;Name=SDY_2706;Note=SDY2706;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2706
NC_007606.1	RefSeq	CDS	2498878	2499114	.	-	0	ID=cds2350;Parent=gene2651;Dbxref=Genbank:YP_404244.1,GeneID:3798808;Name=YP_404244.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404244.1;transl_table=11
NC_007606.1	RefSeq	gene	2499162	2500634	.	-	.	ID=gene2652;Dbxref=GeneID:3798809;Name=engA;Note=SDY2707;gbkey=Gene;gene=engA;gene_biotype=protein_coding;gene_synonym=yfgK,yphC;locus_tag=SDY_2707
NC_007606.1	RefSeq	CDS	2499162	2500634	.	-	0	ID=cds2351;Parent=gene2652;Dbxref=Genbank:YP_404245.2,GeneID:3798809;Name=YP_404245.2;Note=EngA%3B essential Neisserial GTPase%3B synchronizes cellular events by interacting with multiple targets with tandem G-domains%3B overexpression in Escherichia coli suppresses rrmJ mutation%3B structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains;gbkey=CDS;gene=engA;product=GTP-binding protein EngA;protein_id=YP_404245.2;transl_table=11
NC_007606.1	RefSeq	gene	2500752	2501930	.	-	.	ID=gene2653;Dbxref=GeneID:3798810;Name=SDY_2708;Note=SDY2708;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2708
NC_007606.1	RefSeq	CDS	2500752	2501930	.	-	0	ID=cds2352;Parent=gene2653;Dbxref=Genbank:YP_404246.1,GeneID:3798810;Name=YP_404246.1;Note=''with YaeT%2C YfiO%2C and NlpB forms a complex involved in outer membrane protein biogenesis'';gbkey=CDS;product=outer membrane protein assembly complex subunit YfgL;protein_id=YP_404246.1;transl_table=11
NC_007606.1	RefSeq	gene	2501941	2502561	.	-	.	ID=gene2654;Dbxref=GeneID:3798811;Name=SDY_2709;Note=SDY2709;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2709
NC_007606.1	RefSeq	CDS	2501941	2502561	.	-	0	ID=cds2353;Parent=gene2654;Dbxref=Genbank:YP_404247.1,GeneID:3798811;Name=YP_404247.1;Note=Code: S%3B COG: COG2976;gbkey=CDS;product=hypothetical protein;protein_id=YP_404247.1;transl_table=11
NC_007606.1	RefSeq	gene	2502579	2503853	.	-	.	ID=gene2655;Dbxref=GeneID:3798812;Name=hisS;Note=SDY2710;gbkey=Gene;gene=hisS;gene_biotype=protein_coding;locus_tag=SDY_2710
NC_007606.1	RefSeq	CDS	2502579	2503853	.	-	0	ID=cds2354;Parent=gene2655;Dbxref=Genbank:YP_404248.1,GeneID:3798812;Name=YP_404248.1;Note=''catalyzes a two-step reaction%2C first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B class II aminoacyl-tRNA synthetase%3B forms homodimers%3B some organisms have a paralogous gene%2C hisZ%2C that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG'';gbkey=CDS;gene=hisS;product=histidyl-tRNA synthetase;protein_id=YP_404248.1;transl_table=11
NC_007606.1	RefSeq	gene	2503964	2505082	.	-	.	ID=gene2656;Dbxref=GeneID:3798813;Name=ispG;Note=SDY2711;gbkey=Gene;gene=ispG;gene_biotype=protein_coding;gene_synonym=gcpE;locus_tag=SDY_2711
NC_007606.1	RefSeq	CDS	2503964	2505082	.	-	0	ID=cds2355;Parent=gene2656;Dbxref=Genbank:YP_404249.1,GeneID:3798813;Name=YP_404249.1;Note=''catalyzes the conversion of 2C-methyl-D-erythritol 2%2C4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate%3B involved in isoprenoid synthesis'';gbkey=CDS;gene=ispG;product=4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase;protein_id=YP_404249.1;transl_table=11
NC_007606.1	RefSeq	gene	2505109	2506122	.	-	.	ID=gene2657;Dbxref=GeneID:3798814;Name=yfgA;Note=SDY2712;gbkey=Gene;gene=yfgA;gene_biotype=protein_coding;locus_tag=SDY_2712
NC_007606.1	RefSeq	CDS	2505109	2506122	.	-	0	ID=cds2356;Parent=gene2657;Dbxref=Genbank:YP_404250.1,GeneID:3798814;Name=YP_404250.1;Note=Code: S%3B COG: COG1426;gbkey=CDS;gene=yfgA;product=hypothetical protein;protein_id=YP_404250.1;transl_table=11
NC_007606.1	RefSeq	gene	2506407	2507561	.	-	.	ID=gene2658;Dbxref=GeneID:3798815;Name=yfgB;Note=SDY2713;gbkey=Gene;gene=yfgB;gene_biotype=protein_coding;locus_tag=SDY_2713
NC_007606.1	RefSeq	CDS	2506407	2507561	.	-	0	ID=cds2357;Parent=gene2658;Dbxref=Genbank:YP_404251.1,GeneID:3798815;Name=YP_404251.1;Note=Code: R%3B COG: COG0820;gbkey=CDS;gene=yfgB;product=hypothetical protein;protein_id=YP_404251.1;transl_table=11
NC_007606.1	RefSeq	gene	2507711	2508142	.	-	.	ID=gene2659;Dbxref=GeneID:3798816;Name=ndk;Note=SDY2714;gbkey=Gene;gene=ndk;gene_biotype=protein_coding;locus_tag=SDY_2714
NC_007606.1	RefSeq	CDS	2507711	2508142	.	-	0	ID=cds2358;Parent=gene2659;Dbxref=Genbank:YP_404252.1,GeneID:3798816;Name=YP_404252.1;Note=catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate;gbkey=CDS;gene=ndk;product=nucleoside diphosphate kinase;protein_id=YP_404252.1;transl_table=11
NC_007606.1	RefSeq	gene	2508291	2510602	.	-	.	ID=gene2660;Dbxref=GeneID:3798817;Name=pbpC;Note=SDY2715%3B frameshift%3B original product:  peptidoglycan enzyme;gbkey=Gene;gene=pbpC;gene_biotype=pseudogene;locus_tag=SDY_2715;pseudo=true
NC_007606.1	RefSeq	gene	2510603	2515564	.	-	.	ID=gene2661;Dbxref=GeneID:3798818;Name=SDY_2716;Note=''SDY2716%3B contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2716;pseudo=true
NC_007606.1	RefSeq	gene	2515771	2516616	.	+	.	ID=gene2662;Dbxref=GeneID:3798819;Name=sseA;Note=SDY2717;gbkey=Gene;gene=sseA;gene_biotype=protein_coding;locus_tag=SDY_2717
NC_007606.1	RefSeq	CDS	2515771	2516616	.	+	0	ID=cds2359;Parent=gene2662;Dbxref=Genbank:YP_404253.2,GeneID:3798819;Name=YP_404253.2;Note=catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds;gbkey=CDS;gene=sseA;product=3-mercaptopyruvate sulfurtransferase;protein_id=YP_404253.2;transl_table=11
NC_007606.1	RefSeq	gene	2517763	2518539	.	-	.	ID=gene2663;Dbxref=GeneID:3798820;Name=sseB;Note=SDY2718;gbkey=Gene;gene=sseB;gene_biotype=protein_coding;locus_tag=SDY_2718
NC_007606.1	RefSeq	CDS	2517763	2518539	.	-	0	ID=cds2360;Parent=gene2663;Dbxref=Genbank:YP_404254.2,GeneID:3798820;Name=YP_404254.2;Note=enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I;gbkey=CDS;gene=sseB;product=enhanced serine sensitivity protein SseB;protein_id=YP_404254.2;transl_table=11
NC_007606.1	RefSeq	gene	2518682	2519965	.	-	.	ID=gene2664;Dbxref=GeneID:3798821;Name=pepB;Note=SDY2719;gbkey=Gene;gene=pepB;gene_biotype=protein_coding;locus_tag=SDY_2719
NC_007606.1	RefSeq	CDS	2518682	2519965	.	-	0	ID=cds2361;Parent=gene2664;Dbxref=Genbank:YP_404255.2,GeneID:3798821;Name=YP_404255.2;Note=catalyzes the removal of an N-terminal amino acid from a peptide or arylamide;gbkey=CDS;gene=pepB;product=aminopeptidase;protein_id=YP_404255.2;transl_table=11
NC_007606.1	RefSeq	gene	2520143	2520343	.	-	.	ID=gene2665;Dbxref=GeneID:3798253;Name=yfhJ;Note=SDY2720;gbkey=Gene;gene=yfhJ;gene_biotype=protein_coding;locus_tag=SDY_2720
NC_007606.1	RefSeq	CDS	2520143	2520343	.	-	0	ID=cds2362;Parent=gene2665;Dbxref=Genbank:YP_404256.1,GeneID:3798253;Name=YP_404256.1;Note=Code: S%3B COG: COG2975;gbkey=CDS;gene=yfhJ;product=hypothetical protein;protein_id=YP_404256.1;transl_table=11
NC_007606.1	RefSeq	gene	2520355	2520690	.	-	.	ID=gene2666;Dbxref=GeneID:3798254;Name=fdx;Note=SDY2721;gbkey=Gene;gene=fdx;gene_biotype=protein_coding;locus_tag=SDY_2721
NC_007606.1	RefSeq	CDS	2520355	2520690	.	-	0	ID=cds2363;Parent=gene2666;Dbxref=Genbank:YP_404257.1,GeneID:3798254;Name=YP_404257.1;Note=Code: C%3B COG: COG0633;gbkey=CDS;gene=fdx;product=[2FE-2S] ferredoxin%2C electron carrer protein;protein_id=YP_404257.1;transl_table=11
NC_007606.1	RefSeq	gene	2520692	2522542	.	-	.	ID=gene2667;Dbxref=GeneID:3798255;Name=hscA;Note=SDY2722;gbkey=Gene;gene=hscA;gene_biotype=protein_coding;locus_tag=SDY_2722
NC_007606.1	RefSeq	CDS	2520692	2522542	.	-	0	ID=cds2364;Parent=gene2667;Dbxref=Genbank:YP_404258.1,GeneID:3798255;Name=YP_404258.1;Note=involved in the maturation of iron-sulfur cluster-containing proteins;gbkey=CDS;gene=hscA;product=chaperone protein HscA;protein_id=YP_404258.1;transl_table=11
NC_007606.1	RefSeq	gene	2522559	2523074	.	-	.	ID=gene2668;Dbxref=GeneID:3798256;Name=hscB;Note=SDY2723;gbkey=Gene;gene=hscB;gene_biotype=protein_coding;locus_tag=SDY_2723
NC_007606.1	RefSeq	CDS	2522559	2523074	.	-	0	ID=cds2365;Parent=gene2668;Dbxref=Genbank:YP_404259.1,GeneID:3798256;Name=YP_404259.1;Note=J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone%3B may function in biogenesis of iron-sulfur proteins;gbkey=CDS;gene=hscB;product=co-chaperone HscB;protein_id=YP_404259.1;transl_table=11
NC_007606.1	RefSeq	gene	2523170	2523493	.	-	.	ID=gene2669;Dbxref=GeneID:3798257;Name=iscA;Note=SDY2724;gbkey=Gene;gene=iscA;gene_biotype=protein_coding;locus_tag=SDY_2724
NC_007606.1	RefSeq	CDS	2523170	2523493	.	-	0	ID=cds2366;Parent=gene2669;Dbxref=Genbank:YP_404260.1,GeneID:3798257;Name=YP_404260.1;Note=forms iron-sulfur clusters of ferredoxin [2FE-2S]%3B binds iron in the presence of the thioredoxin reductase system%3B forms homodimers and tetramers%3B similar to SufA protein;gbkey=CDS;gene=iscA;product=iron-sulfur cluster assembly protein;protein_id=YP_404260.1;transl_table=11
NC_007606.1	RefSeq	gene	2523510	2523896	.	-	.	ID=gene2670;Dbxref=GeneID:3798258;Name=SDY_2725;Note=SDY2725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2725
NC_007606.1	RefSeq	CDS	2523510	2523896	.	-	0	ID=cds2367;Parent=gene2670;Dbxref=Genbank:YP_404261.1,GeneID:3798258;Name=YP_404261.1;Note=Code: C%3B COG: COG0822;gbkey=CDS;product=scaffold protein;protein_id=YP_404261.1;transl_table=11
NC_007606.1	RefSeq	gene	2523924	2525162	.	-	.	ID=gene2671;Dbxref=GeneID:3798259;Name=yfhO;Note=SDY2726;gbkey=Gene;gene=yfhO;gene_biotype=protein_coding;locus_tag=SDY_2726
NC_007606.1	RefSeq	CDS	2523924	2525162	.	-	0	ID=cds2368;Parent=gene2671;Dbxref=Genbank:YP_404262.1,GeneID:3798259;Name=YP_404262.1;Note=catalyzes the removal of elemental sulfur from cysteine to produce alanine%3B involved in NAD biosynthesis;gbkey=CDS;gene=yfhO;product=cysteine desulfurase;protein_id=YP_404262.1;transl_table=11
NC_007606.1	RefSeq	gene	2525250	2525738	.	-	.	ID=gene2672;Dbxref=GeneID:3798260;Name=SDY_2727;Note=SDY2727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2727
NC_007606.1	RefSeq	CDS	2525250	2525738	.	-	0	ID=cds2369;Parent=gene2672;Dbxref=Genbank:YP_404263.1,GeneID:3798260;Name=YP_404263.1;Note=regulates the expression of the iscRSUA operon;gbkey=CDS;product=DNA-binding transcriptional regulator IscR;protein_id=YP_404263.1;transl_table=11
NC_007606.1	RefSeq	gene	2526038	2526775	.	-	.	ID=gene2673;Dbxref=GeneID:3798261;Name=SDY_2728;Note=SDY2728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2728
NC_007606.1	RefSeq	CDS	2526038	2526775	.	-	0	ID=cds2370;Parent=gene2673;Dbxref=Genbank:YP_404264.1,GeneID:3798261;Name=YP_404264.1;Note=Code: J%3B COG: COG0565;gbkey=CDS;product=ATP synthase subunit beta;protein_id=YP_404264.1;transl_table=11
NC_007606.1	RefSeq	gene	2526894	2527697	.	+	.	ID=gene2674;Dbxref=GeneID:3798262;Name=suhB;Note=SDY2729;gbkey=Gene;gene=suhB;gene_biotype=protein_coding;locus_tag=SDY_2729
NC_007606.1	RefSeq	CDS	2526894	2527697	.	+	0	ID=cds2371;Parent=gene2674;Dbxref=Genbank:YP_404265.1,GeneID:3798262;Name=YP_404265.1;Note=Code: G%3B COG: COG0483;gbkey=CDS;gene=suhB;product=inositol monophosphatase;protein_id=YP_404265.1;transl_table=11
NC_007606.1	RefSeq	gene	2527815	2528696	.	+	.	ID=gene2675;Dbxref=GeneID:3798263;Name=SDY_2730;Note=SDY2730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2730
NC_007606.1	RefSeq	CDS	2527815	2528696	.	+	0	ID=cds2372;Parent=gene2675;Dbxref=Genbank:YP_404266.1,GeneID:3798263;Name=YP_404266.1;Note=Code: R%3B COG: COG1073;gbkey=CDS;product=hydrolase;protein_id=YP_404266.1;transl_table=11
NC_007606.1	RefSeq	gene	2528887	2530167	.	+	.	ID=gene2676;Dbxref=GeneID:3798264;Name=csiE;Note=SDY2731;gbkey=Gene;gene=csiE;gene_biotype=protein_coding;locus_tag=SDY_2731
NC_007606.1	RefSeq	CDS	2528887	2530167	.	+	0	ID=cds2373;Parent=gene2676;Dbxref=Genbank:YP_404267.2,GeneID:3798264;Name=YP_404267.2;Note=Code: K%3B COG: COG3711;gbkey=CDS;gene=csiE;product=stationary phase inducible protein CsiE;protein_id=YP_404267.2;transl_table=11
NC_007606.1	RefSeq	gene	2530159	2531298	.	-	.	ID=gene2677;Dbxref=GeneID:3798265;Name=hcaT;Note=SDY2732;gbkey=Gene;gene=hcaT;gene_biotype=protein_coding;locus_tag=SDY_2732
NC_007606.1	RefSeq	CDS	2530159	2531298	.	-	0	ID=cds2374;Parent=gene2677;Dbxref=Genbank:YP_404268.1,GeneID:3798265;Name=YP_404268.1;Note=transporter of 3-phenylpropionate across the inner membrane%3B member of the major facilitator superfamily of transporters;gbkey=CDS;gene=hcaT;product=3-phenylpropionic acid transporter;protein_id=YP_404268.1;transl_table=11
NC_007606.1	RefSeq	gene	2531458	2531748	.	-	.	ID=gene2678;Dbxref=GeneID:3798267;Name=SDY_2734;Note=SDY2734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2734
NC_007606.1	RefSeq	CDS	2531458	2531748	.	-	0	ID=cds2375;Parent=gene2678;Dbxref=Genbank:YP_404269.1,GeneID:3798267;Name=YP_404269.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404269.1;transl_table=11
NC_007606.1	RefSeq	gene	2531458	2531565	.	-	.	ID=gene2679;Dbxref=GeneID:3798266;Name=hcaR;Note=SDY2733%3B truncated%3B original product: transcriptional activator of hca cluster;gbkey=Gene;gene=hcaR;gene_biotype=pseudogene;locus_tag=SDY_2733;pseudo=true
NC_007606.1	RefSeq	region	2531614	2532379	.	+	.	ID=id444;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2531970	2532365	.	+	.	ID=gene2680;Dbxref=GeneID:3798268;Name=SDY_2735;Note=SDY2735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2735
NC_007606.1	RefSeq	CDS	2531970	2532365	.	+	0	ID=cds2376;Parent=gene2680;Dbxref=Genbank:YP_404270.1,GeneID:3798268;Name=YP_404270.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404270.1;transl_table=11
NC_007606.1	RefSeq	gene	2532362	2532562	.	-	.	ID=gene2681;Dbxref=GeneID:3798269;Name=yphF;Note=SDY2736%3B truncated%3B original product:  LACI-type transcriptional regulator;gbkey=Gene;gene=yphF;gene_biotype=pseudogene;locus_tag=SDY_2736;pseudo=true
NC_007606.1	RefSeq	gene	2532697	2535978	.	-	.	ID=gene2682;Dbxref=GeneID:3798270;Name=SDY_2737;Note=SDY2737;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2737;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	2536000	2536767	.	-	.	ID=id445;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2536016	2536411	.	-	.	ID=gene2683;Dbxref=GeneID:3797611;Name=SDY_2739;Note=SDY2739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2739
NC_007606.1	RefSeq	CDS	2536016	2536411	.	-	0	ID=cds2377;Parent=gene2683;Dbxref=Genbank:YP_404273.1,GeneID:3797611;Name=YP_404273.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404273.1;transl_table=11
NC_007606.1	RefSeq	gene	2536438	2536710	.	-	.	ID=gene2684;Dbxref=GeneID:18263114;Name=SDY_4725;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4725
NC_007606.1	RefSeq	CDS	2536438	2536710	.	-	0	ID=cds2378;Parent=gene2684;Dbxref=Genbank:YP_009000800.1,GeneID:18263114;Name=YP_009000800.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000800.1;transl_table=11
NC_007606.1	RefSeq	gene	2536864	2538063	.	+	.	ID=gene2685;Dbxref=GeneID:3797612;Name=yphH;Note=SDY2740;gbkey=Gene;gene=yphH;gene_biotype=protein_coding;locus_tag=SDY_2740
NC_007606.1	RefSeq	CDS	2536864	2538063	.	+	0	ID=cds2379;Parent=gene2685;Dbxref=Genbank:YP_404274.1,GeneID:3797612;Name=YP_404274.1;Note=Code: KG%3B COG: COG1940;gbkey=CDS;gene=yphH;product=NAGC-like transcriptional regulator;protein_id=YP_404274.1;transl_table=11
NC_007606.1	RefSeq	gene	2538126	2539379	.	-	.	ID=gene2686;Dbxref=GeneID:3797613;Name=glyA;Note=SDY2741;gbkey=Gene;gene=glyA;gene_biotype=protein_coding;locus_tag=SDY_2741
NC_007606.1	RefSeq	CDS	2538126	2539379	.	-	0	ID=cds2380;Parent=gene2686;Dbxref=Genbank:YP_404275.1,GeneID:3797613;Name=YP_404275.1;Note=''catalyzes the reaction of glycine with 5%2C10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate'';gbkey=CDS;gene=glyA;product=serine hydroxymethyltransferase;protein_id=YP_404275.1;transl_table=11
NC_007606.1	RefSeq	gene	2539706	2540896	.	+	.	ID=gene2687;Dbxref=GeneID:3797614;Name=hmpA;Note=SDY2742;gbkey=Gene;gene=hmpA;gene_biotype=protein_coding;locus_tag=SDY_2742
NC_007606.1	RefSeq	CDS	2539706	2540896	.	+	0	ID=cds2381;Parent=gene2687;Dbxref=Genbank:YP_404276.1,GeneID:3797614;Name=YP_404276.1;Note=flavohemoprotein%3B catalyzes the formation of nitrate from nitric oxide%3B can also catalyze the reduction of dihydropteridine;gbkey=CDS;gene=hmpA;product=nitric oxide dioxygenase;protein_id=YP_404276.1;transl_table=11
NC_007606.1	RefSeq	gene	2540941	2541279	.	-	.	ID=gene2688;Dbxref=GeneID:3797615;Name=glnB;Note=SDY2743;gbkey=Gene;gene=glnB;gene_biotype=protein_coding;locus_tag=SDY_2743
NC_007606.1	RefSeq	CDS	2540941	2541279	.	-	0	ID=cds2382;Parent=gene2688;Dbxref=Genbank:YP_404277.1,GeneID:3797615;Name=YP_404277.1;Note=''indirectly regulates nitrogen metabolism%3B at high nitrogen levels P-II prevents the phosphorylation of NR-I%2C the transcriptional activator of the glutamine synthetase gene (glnA)%3B at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA'';gbkey=CDS;gene=glnB;product=nitrogen regulatory protein P-II 1;protein_id=YP_404277.1;transl_table=11
NC_007606.1	RefSeq	gene	2541340	2542674	.	-	.	ID=gene2689;Dbxref=GeneID:3797616;Name=yfhA;Note=SDY2744;gbkey=Gene;gene=yfhA;gene_biotype=protein_coding;locus_tag=SDY_2744
NC_007606.1	RefSeq	CDS	2541340	2542674	.	-	0	ID=cds2383;Parent=gene2689;Dbxref=Genbank:YP_404278.1,GeneID:3797616;Name=YP_404278.1;Note=Code: T%3B COG: COG2204;gbkey=CDS;gene=yfhA;product=2-component transcriptional regulator;protein_id=YP_404278.1;transl_table=11
NC_007606.1	RefSeq	gene	2542664	2543377	.	-	.	ID=gene2690;Dbxref=GeneID:3797617;Name=yfhG;Note=SDY2745;gbkey=Gene;gene=yfhG;gene_biotype=protein_coding;locus_tag=SDY_2745
NC_007606.1	RefSeq	CDS	2542664	2543377	.	-	0	ID=cds2384;Parent=gene2690;Dbxref=Genbank:YP_404279.1,GeneID:3797617;Name=YP_404279.1;gbkey=CDS;gene=yfhG;product=hypothetical protein;protein_id=YP_404279.1;transl_table=11
NC_007606.1	RefSeq	gene	2543542	2545032	.	-	.	ID=gene2691;Dbxref=GeneID:3797618;Name=yfhK;Note=SDY2746;gbkey=Gene;gene=yfhK;gene_biotype=protein_coding;locus_tag=SDY_2746
NC_007606.1	RefSeq	CDS	2543542	2545032	.	-	0	ID=cds2385;Parent=gene2691;Dbxref=Genbank:YP_404280.1,GeneID:3797618;Name=YP_404280.1;Note=Code: T%3B COG: COG0642;gbkey=CDS;gene=yfhK;product=2-component sensor protein;protein_id=YP_404280.1;transl_table=11
NC_007606.1	RefSeq	gene	2545533	2549420	.	-	.	ID=gene2692;Dbxref=GeneID:3797619;Name=purL;Note=SDY2747;gbkey=Gene;gene=purL;gene_biotype=protein_coding;locus_tag=SDY_2747
NC_007606.1	RefSeq	CDS	2545533	2549420	.	-	0	ID=cds2386;Parent=gene2692;Dbxref=Genbank:YP_404281.1,GeneID:3797619;Name=YP_404281.1;Note=catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis;gbkey=CDS;gene=purL;product=phosphoribosylformylglycinamidine synthase;protein_id=YP_404281.1;transl_table=11
NC_007606.1	RefSeq	gene	2549820	2551238	.	+	.	ID=gene2693;Dbxref=GeneID:3797620;Name=yfhD;Note=SDY2748;gbkey=Gene;gene=yfhD;gene_biotype=protein_coding;locus_tag=SDY_2748
NC_007606.1	RefSeq	CDS	2549820	2551238	.	+	0	ID=cds2387;Parent=gene2693;Dbxref=Genbank:YP_404282.1,GeneID:3797620;Name=YP_404282.1;Note=''YfhD%3B uncharacterized member of the transglycosylase slt family%3B part of the rob operon%2C which plays a role in cellular resistance to antibiotics%2C bactericidal agents%2C and organic solvents%3B unknown function'';gbkey=CDS;gene=yfhD;product=transglycosylase;protein_id=YP_404282.1;transl_table=11
NC_007606.1	RefSeq	gene	2551235	2551771	.	-	.	ID=gene2694;Dbxref=GeneID:3797621;Name=yfhC;Note=SDY2749;gbkey=Gene;gene=yfhC;gene_biotype=protein_coding;locus_tag=SDY_2749
NC_007606.1	RefSeq	CDS	2551235	2551771	.	-	0	ID=cds2388;Parent=gene2694;Dbxref=Genbank:YP_404283.1,GeneID:3797621;Name=YP_404283.1;Note=Code: FJ%3B COG: COG0590;gbkey=CDS;gene=yfhC;product=tRNA-specific adenosine deaminase;protein_id=YP_404283.1;transl_table=11
NC_007606.1	RefSeq	gene	2551796	2552431	.	-	.	ID=gene2695;Dbxref=GeneID:3797622;Name=yfhB;Note=SDY2750;gbkey=Gene;gene=yfhB;gene_biotype=protein_coding;locus_tag=SDY_2750
NC_007606.1	RefSeq	CDS	2551796	2552431	.	-	0	ID=cds2389;Parent=gene2695;Dbxref=Genbank:YP_404284.2,GeneID:3797622;Name=YP_404284.2;Note=Code: E%3B COG: COG0560;gbkey=CDS;gene=yfhB;product=hypothetical protein;protein_id=YP_404284.2;transl_table=11
NC_007606.1	RefSeq	gene	2552640	2553488	.	+	.	ID=gene2696;Dbxref=GeneID:3797623;Name=yfhH;Note=SDY2751;gbkey=Gene;gene=yfhH;gene_biotype=protein_coding;locus_tag=SDY_2751
NC_007606.1	RefSeq	CDS	2552640	2553488	.	+	0	ID=cds2390;Parent=gene2696;Dbxref=Genbank:YP_404285.2,GeneID:3797623;Name=YP_404285.2;Note=Code: K%3B COG: COG1737;gbkey=CDS;gene=yfhH;product=DNA-binding transcriptional regulator;protein_id=YP_404285.2;transl_table=11
NC_007606.1	RefSeq	gene	2554379	2554819	.	-	.	ID=gene2697;Dbxref=GeneID:3797624;Name=SDY_2752;Note=SDY2752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2752
NC_007606.1	RefSeq	CDS	2554379	2554819	.	-	0	ID=cds2391;Parent=gene2697;Dbxref=Genbank:YP_404286.1,GeneID:3797624;Name=YP_404286.1;Note=Code: L%3B COG: COG1961;gbkey=CDS;product=DNA-invertase;protein_id=YP_404286.1;transl_table=11
NC_007606.1	RefSeq	gene	2555309	2557135	.	+	.	ID=gene2698;Dbxref=GeneID:3797625;Name=ipaH_6;Note=SDY2753;gbkey=Gene;gene=ipaH_6;gene_biotype=protein_coding;locus_tag=SDY_2753
NC_007606.1	RefSeq	CDS	2555309	2557135	.	+	0	ID=cds2392;Parent=gene2698;Dbxref=Genbank:YP_404287.1,GeneID:3797625;Name=YP_404287.1;Note=Code: S%3B COG: COG4886;gbkey=CDS;gene=ipaH_6;product=invasion plasmid antigen;protein_id=YP_404287.1;transl_table=11
NC_007606.1	RefSeq	gene	2557222	2558008	.	-	.	ID=gene2699;Dbxref=GeneID:3797626;Name=SDY_2754;Note=SDY2754;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2754;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	2557252	2558515	.	-	.	ID=id446;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2558149	2558451	.	-	.	ID=gene2700;Dbxref=GeneID:3797627;Name=SDY_2755;Note=SDY2755;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2755
NC_007606.1	RefSeq	CDS	2558149	2558451	.	-	0	ID=cds2393;Parent=gene2700;Dbxref=Genbank:YP_404289.1,GeneID:3797627;Name=YP_404289.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_404289.1;transl_table=11
NC_007606.1	RefSeq	region	2558516	2558809	.	+	.	ID=id447;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2558866	2559428	.	-	.	ID=gene2701;Dbxref=GeneID:3797629;Name=SDY_2757;Note=SDY2757;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2757;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2559444	2560680	.	-	.	ID=gene2702;Dbxref=GeneID:3797630;Name=SDY_2758;Note=SDY2758;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2758;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	2561042	2561807	.	+	.	ID=id448;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2561099	2561371	.	+	.	ID=gene2703;Dbxref=GeneID:18263115;Name=SDY_4726;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4726
NC_007606.1	RefSeq	CDS	2561099	2561371	.	+	0	ID=cds2394;Parent=gene2703;Dbxref=Genbank:YP_009000801.1,GeneID:18263115;Name=YP_009000801.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000801.1;transl_table=11
NC_007606.1	RefSeq	gene	2561398	2561793	.	+	.	ID=gene2704;Dbxref=GeneID:3795355;Name=SDY_2761;Note=SDY2761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2761
NC_007606.1	RefSeq	CDS	2561398	2561793	.	+	0	ID=cds2395;Parent=gene2704;Dbxref=Genbank:YP_404295.1,GeneID:3795355;Name=YP_404295.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404295.1;transl_table=11
NC_007606.1	RefSeq	gene	2561768	2562136	.	-	.	ID=gene2705;Dbxref=GeneID:3795356;Name=yfiL;Note=SDY2762;gbkey=Gene;gene=yfiL;gene_biotype=protein_coding;locus_tag=SDY_2762
NC_007606.1	RefSeq	CDS	2561768	2562136	.	-	0	ID=cds2396;Parent=gene2705;Dbxref=Genbank:YP_404296.1,GeneID:3795356;Name=YP_404296.1;gbkey=CDS;gene=yfiL;product=hypothetical protein;protein_id=YP_404296.1;transl_table=11
NC_007606.1	RefSeq	region	2562164	2562931	.	+	.	ID=id449;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2562219	2562494	.	+	.	ID=gene2706;Dbxref=GeneID:3795357;Name=insA;Note=SDY2763;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2763
NC_007606.1	RefSeq	CDS	2562219	2562494	.	+	0	ID=cds2397;Parent=gene2706;Dbxref=Genbank:YP_404297.1,GeneID:3795357;Name=YP_404297.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_404297.1;transl_table=11
NC_007606.1	RefSeq	gene	2563123	2564193	.	+	.	ID=gene2707;Dbxref=GeneID:3795359;Name=aroF;Note=SDY2765;gbkey=Gene;gene=aroF;gene_biotype=protein_coding;locus_tag=SDY_2765
NC_007606.1	RefSeq	CDS	2563123	2564193	.	+	0	ID=cds2398;Parent=gene2707;Dbxref=Genbank:YP_404299.1,GeneID:3795359;Name=YP_404299.1;Note=''catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate%2C tyrosine sensitive'';gbkey=CDS;gene=aroF;product=phospho-2-dehydro-3-deoxyheptonate aldolase;protein_id=YP_404299.1;transl_table=11
NC_007606.1	RefSeq	gene	2564204	2565325	.	+	.	ID=gene2708;Dbxref=GeneID:3795360;Name=tyrA;Note=SDY2766;gbkey=Gene;gene=tyrA;gene_biotype=protein_coding;locus_tag=SDY_2766
NC_007606.1	RefSeq	CDS	2564204	2565325	.	+	0	ID=cds2399;Parent=gene2708;Dbxref=Genbank:YP_404300.1,GeneID:3795360;Name=YP_404300.1;Note=catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis;gbkey=CDS;gene=tyrA;product=bifunctional chorismate mutase/prephenate dehydrogenase;protein_id=YP_404300.1;transl_table=11
NC_007606.1	RefSeq	gene	2565368	2566528	.	-	.	ID=gene2709;Dbxref=GeneID:3795361;Name=pheA;Note=SDY2767;gbkey=Gene;gene=pheA;gene_biotype=protein_coding;locus_tag=SDY_2767
NC_007606.1	RefSeq	CDS	2565368	2566528	.	-	0	ID=cds2400;Parent=gene2709;Dbxref=Genbank:YP_404301.1,GeneID:3795361;Name=YP_404301.1;Note=catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis;gbkey=CDS;gene=pheA;product=bifunctional chorismate mutase/prephenate dehydratase;protein_id=YP_404301.1;transl_table=11
NC_007606.1	RefSeq	gene	2566779	2567120	.	-	.	ID=gene2710;Dbxref=GeneID:3795362;Name=yfiA;Note=SDY2768;gbkey=Gene;gene=yfiA;gene_biotype=protein_coding;locus_tag=SDY_2768
NC_007606.1	RefSeq	CDS	2566779	2567120	.	-	0	ID=cds2401;Parent=gene2710;Dbxref=Genbank:YP_404302.1,GeneID:3795362;Name=YP_404302.1;Note=associated with 30S ribosomal subunit%3B interferes with translation elongation;gbkey=CDS;gene=yfiA;product=translation inhibitor protein RaiA;protein_id=YP_404302.1;transl_table=11
NC_007606.1	RefSeq	region	2567366	2568780	.	-	.	ID=id450;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2567511	2568695	.	-	.	ID=gene2711;Dbxref=GeneID:3795363;Name=SDY_2769;Note=SDY2769;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2769;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	2568836	2569158	.	-	.	ID=id451;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	2569158	2570420	.	+	.	ID=id452;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2569222	2569524	.	+	.	ID=gene2712;Dbxref=GeneID:3795364;Name=SDY_2770;Note=SDY2770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2770
NC_007606.1	RefSeq	CDS	2569222	2569524	.	+	0	ID=cds2402;Parent=gene2712;Dbxref=Genbank:YP_404304.1,GeneID:3795364;Name=YP_404304.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_404304.1;transl_table=11
NC_007606.1	RefSeq	gene	2569665	2570378	.	+	.	ID=gene2713;Dbxref=GeneID:3795365;Name=SDY_2771;Note=SDY2771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2771
NC_007606.1	RefSeq	CDS	2569665	2570378	.	+	0	ID=cds2403;Parent=gene2713;Dbxref=Genbank:YP_404305.1,GeneID:3795365;Name=YP_404305.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_404305.1;transl_table=11
NC_007606.1	RefSeq	gene	2570452	2571057	.	+	.	ID=gene2714;Dbxref=GeneID:3795366;Name=SDY_2772;Note=SDY2772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2772
NC_007606.1	RefSeq	CDS	2570452	2571057	.	+	0	ID=cds2404;Parent=gene2714;Dbxref=Genbank:YP_404306.1,GeneID:3795366;Name=YP_404306.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404306.1;transl_table=11
NC_007606.1	RefSeq	gene	2571250	2571927	.	+	.	ID=gene2715;Dbxref=GeneID:3795367;Name=SDY_2773;Note=SDY2773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2773
NC_007606.1	RefSeq	CDS	2571250	2571927	.	+	0	ID=cds2405;Parent=gene2715;Dbxref=Genbank:YP_404307.1,GeneID:3795367;Name=YP_404307.1;gbkey=CDS;product=tail fiber protein;protein_id=YP_404307.1;transl_table=11
NC_007606.1	RefSeq	region	2571925	2573115	.	+	.	ID=id453;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2571971	2572381	.	+	.	ID=gene2716;Dbxref=GeneID:3795368;Name=SDY_2774;Note=SDY2774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2774
NC_007606.1	RefSeq	CDS	2571971	2572381	.	+	0	ID=cds2406;Parent=gene2716;Dbxref=Genbank:YP_404308.1,GeneID:3795368;Name=YP_404308.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_404308.1;transl_table=11
NC_007606.1	RefSeq	region	2573097	2573881	.	-	.	ID=id454;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2573130	2573525	.	-	.	ID=gene2717;Dbxref=GeneID:3795370;Name=SDY_2776;Note=SDY2776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2776
NC_007606.1	RefSeq	CDS	2573130	2573525	.	-	0	ID=cds2407;Parent=gene2717;Dbxref=Genbank:YP_404310.1,GeneID:3795370;Name=YP_404310.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404310.1;transl_table=11
NC_007606.1	RefSeq	gene	2573720	2574028	.	+	.	ID=gene2718;Dbxref=GeneID:3795371;Name=SDY_2777;Note=SDY2777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2777
NC_007606.1	RefSeq	CDS	2573720	2574028	.	+	0	ID=cds2408;Parent=gene2718;Dbxref=Genbank:YP_404311.1,GeneID:3795371;Name=YP_404311.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404311.1;transl_table=11
NC_007606.1	RefSeq	gene	2574021	2575233	.	+	.	ID=gene2719;Dbxref=GeneID:3795885;Name=SDY_2778;Note=SDY2778;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2778;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2575249	2575730	.	+	.	ID=gene2720;Dbxref=GeneID:3795886;Name=SDY_2779;Note=SDY2779;gbkey=Gene;gene_biotype=other;locus_tag=SDY_2779
NC_007606.1	RefSeq	gene	2575807	2576154	.	-	.	ID=gene2721;Dbxref=GeneID:3795887;Name=rplS;Note=SDY2780;gbkey=Gene;gene=rplS;gene_biotype=protein_coding;locus_tag=SDY_2780
NC_007606.1	RefSeq	CDS	2575807	2576154	.	-	0	ID=cds2409;Parent=gene2721;Dbxref=Genbank:YP_404314.1,GeneID:3795887;Name=YP_404314.1;Note=this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site;gbkey=CDS;gene=rplS;product=50S ribosomal protein L19;protein_id=YP_404314.1;transl_table=11
NC_007606.1	RefSeq	gene	2576196	2576963	.	-	.	ID=gene2722;Dbxref=GeneID:3795888;Name=trmD;Note=SDY2781;gbkey=Gene;gene=trmD;gene_biotype=protein_coding;locus_tag=SDY_2781
NC_007606.1	RefSeq	CDS	2576196	2576963	.	-	0	ID=cds2410;Parent=gene2722;Dbxref=Genbank:YP_404315.1,GeneID:3795888;Name=YP_404315.1;Note=methylates guanosine-37 in various tRNAs%3B uses S-adenosyl-L-methionine to transfer methyl group to tRNA;gbkey=CDS;gene=trmD;product=tRNA (guanine-N(1)-)-methyltransferase;protein_id=YP_404315.1;transl_table=11
NC_007606.1	RefSeq	gene	2576994	2577542	.	-	.	ID=gene2723;Dbxref=GeneID:3795889;Name=rimM;Note=SDY2782;gbkey=Gene;gene=rimM;gene_biotype=protein_coding;locus_tag=SDY_2782
NC_007606.1	RefSeq	CDS	2576994	2577542	.	-	0	ID=cds2411;Parent=gene2723;Dbxref=Genbank:YP_404316.2,GeneID:3795889;Name=YP_404316.2;Note=Essential for efficient processing of 16S rRNA;gbkey=CDS;gene=rimM;product=16S rRNA-processing protein RimM;protein_id=YP_404316.2;transl_table=11
NC_007606.1	RefSeq	gene	2577561	2577809	.	-	.	ID=gene2724;Dbxref=GeneID:3795890;Name=rpsP;Note=SDY2783;gbkey=Gene;gene=rpsP;gene_biotype=protein_coding;locus_tag=SDY_2783
NC_007606.1	RefSeq	CDS	2577561	2577809	.	-	0	ID=cds2412;Parent=gene2724;Dbxref=Genbank:YP_404317.1,GeneID:3795890;Name=YP_404317.1;Note=binds to lower part of 30S body where it stabilizes two domains%3B required for efficient assembly of 30S%3B in Escherichia coli this protein has nuclease activity;gbkey=CDS;gene=rpsP;product=30S ribosomal protein S16;protein_id=YP_404317.1;transl_table=11
NC_007606.1	RefSeq	gene	2577946	2579307	.	-	.	ID=gene2725;Dbxref=GeneID:3795891;Name=ffh;Note=SDY2784;gbkey=Gene;gene=ffh;gene_biotype=protein_coding;locus_tag=SDY_2784
NC_007606.1	RefSeq	CDS	2577946	2579307	.	-	0	ID=cds2413;Parent=gene2725;Dbxref=Genbank:YP_404318.1,GeneID:3795891;Name=YP_404318.1;Note=with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins;gbkey=CDS;gene=ffh;product=signal recognition particle protein;protein_id=YP_404318.1;transl_table=11
NC_007606.1	RefSeq	gene	2579399	2580265	.	+	.	ID=gene2726;Dbxref=GeneID:3795892;Name=SDY_2785;Note=SDY2785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2785
NC_007606.1	RefSeq	CDS	2579399	2580265	.	+	0	ID=cds2414;Parent=gene2726;Dbxref=Genbank:YP_404319.1,GeneID:3795892;Name=YP_404319.1;Note=Code: R%3B COG: COG4137;gbkey=CDS;product=hypothetical protein;protein_id=YP_404319.1;transl_table=11
NC_007606.1	RefSeq	gene	2580376	2581572	.	+	.	ID=gene2727;Dbxref=GeneID:3795893;Name=yfjD;Note=SDY2786;gbkey=Gene;gene=yfjD;gene_biotype=protein_coding;locus_tag=SDY_2786
NC_007606.1	RefSeq	CDS	2580376	2581572	.	+	0	ID=cds2415;Parent=gene2727;Dbxref=Genbank:YP_404320.2,GeneID:3795893;Name=YP_404320.2;Note=Code: P%3B COG: COG4536;gbkey=CDS;gene=yfjD;product=hypothetical protein;protein_id=YP_404320.2;transl_table=11
NC_007606.1	RefSeq	gene	2581627	2582220	.	-	.	ID=gene2728;Dbxref=GeneID:3795894;Name=grpE;Note=SDY2787;gbkey=Gene;gene=grpE;gene_biotype=protein_coding;locus_tag=SDY_2787
NC_007606.1	RefSeq	CDS	2581627	2582220	.	-	0	ID=cds2416;Parent=gene2728;Dbxref=Genbank:YP_404321.1,GeneID:3795894;Name=YP_404321.1;Note=with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins%3B may act as a thermosensor;gbkey=CDS;gene=grpE;product=heat shock protein GrpE;protein_id=YP_404321.1;transl_table=11
NC_007606.1	RefSeq	gene	2582343	2583221	.	+	.	ID=gene2729;Dbxref=GeneID:3795895;Name=ppnK;Note=SDY2788;gbkey=Gene;gene=ppnK;gene_biotype=protein_coding;locus_tag=SDY_2788
NC_007606.1	RefSeq	CDS	2582343	2583221	.	+	0	ID=cds2417;Parent=gene2729;Dbxref=Genbank:YP_404322.1,GeneID:3795895;Name=YP_404322.1;Note=catalyzes the phosphorylation of NAD to NADP;gbkey=CDS;gene=ppnK;product=inorganic polyphosphate/ATP-NAD kinase;protein_id=YP_404322.1;transl_table=11
NC_007606.1	RefSeq	gene	2583307	2584968	.	+	.	ID=gene2730;Dbxref=GeneID:3795896;Name=recN;Note=SDY2789;gbkey=Gene;gene=recN;gene_biotype=protein_coding;locus_tag=SDY_2789
NC_007606.1	RefSeq	CDS	2583307	2584968	.	+	0	ID=cds2418;Parent=gene2730;Dbxref=Genbank:YP_404323.1,GeneID:3795896;Name=YP_404323.1;Note=Code: L%3B COG: COG0497;gbkey=CDS;gene=recN;product=recombination and repair protein;protein_id=YP_404323.1;transl_table=11
NC_007606.1	RefSeq	gene	2585117	2585458	.	+	.	ID=gene2731;Dbxref=GeneID:3795897;Name=smpA;Note=SDY2790;gbkey=Gene;gene=smpA;gene_biotype=protein_coding;locus_tag=SDY_2790
NC_007606.1	RefSeq	CDS	2585117	2585458	.	+	0	ID=cds2419;Parent=gene2731;Dbxref=Genbank:YP_404324.2,GeneID:3795897;Name=YP_404324.2;Note=Code: J%3B COG: COG2913;gbkey=CDS;gene=smpA;product=hypothetical protein;protein_id=YP_404324.2;transl_table=11
NC_007606.1	RefSeq	gene	2585520	2585810	.	-	.	ID=gene2732;Dbxref=GeneID:3795898;Name=SDY_2791;Note=SDY2791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2791
NC_007606.1	RefSeq	CDS	2585520	2585810	.	-	0	ID=cds2420;Parent=gene2732;Dbxref=Genbank:YP_404325.2,GeneID:3795898;Name=YP_404325.2;Note=Code: S%3B COG: COG2914;gbkey=CDS;product=hypothetical protein;protein_id=YP_404325.2;transl_table=11
NC_007606.1	RefSeq	gene	2585800	2586276	.	-	.	ID=gene2733;Dbxref=GeneID:3795899;Name=SDY_2792;Note=SDY2792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2792
NC_007606.1	RefSeq	CDS	2585800	2586276	.	-	0	ID=cds2421;Parent=gene2733;Dbxref=Genbank:YP_404326.1,GeneID:3795899;Name=YP_404326.1;Note=Code: I%3B COG: COG2867;gbkey=CDS;product=hypothetical protein;protein_id=YP_404326.1;transl_table=11
NC_007606.1	RefSeq	gene	2586408	2586890	.	+	.	ID=gene2734;Dbxref=GeneID:3795900;Name=smpB;Note=SDY2793;gbkey=Gene;gene=smpB;gene_biotype=protein_coding;locus_tag=SDY_2793
NC_007606.1	RefSeq	CDS	2586408	2586890	.	+	0	ID=cds2422;Parent=gene2734;Dbxref=Genbank:YP_404327.1,GeneID:3795900;Name=YP_404327.1;Note=binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes%3B also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site%3B SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus%3B both the tmRNA and SmpB are regulated in cell cycle-dependent manner%3B functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation;gbkey=CDS;gene=smpB;product=SsrA-binding protein;protein_id=YP_404327.1;transl_table=11
NC_007606.1	RefSeq	gene	2587628	2587840	.	-	.	ID=gene2735;Dbxref=GeneID:3795901;Name=SDY_2794;Note=SDY2794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2794
NC_007606.1	RefSeq	CDS	2587628	2587840	.	-	0	ID=cds2423;Parent=gene2735;Dbxref=Genbank:YP_404328.1,GeneID:3795901;Name=YP_404328.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404328.1;transl_table=11
NC_007606.1	RefSeq	region	2589714	2590036	.	+	.	ID=id455;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	2590037	2590802	.	+	.	ID=id456;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2590094	2590366	.	+	.	ID=gene2736;Dbxref=GeneID:18263116;Name=SDY_4727;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4727
NC_007606.1	RefSeq	CDS	2590094	2590366	.	+	0	ID=cds2424;Parent=gene2736;Dbxref=Genbank:YP_009000802.1,GeneID:18263116;Name=YP_009000802.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000802.1;transl_table=11
NC_007606.1	RefSeq	gene	2590393	2590788	.	+	.	ID=gene2737;Dbxref=GeneID:3795904;Name=SDY_2797;Note=SDY2797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2797
NC_007606.1	RefSeq	CDS	2590393	2590788	.	+	0	ID=cds2425;Parent=gene2737;Dbxref=Genbank:YP_404331.1,GeneID:3795904;Name=YP_404331.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404331.1;transl_table=11
NC_007606.1	RefSeq	gene	2590988	2591923	.	+	.	ID=gene2738;Dbxref=GeneID:3795499;Name=SDY_2798;Note=SDY2798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2798
NC_007606.1	RefSeq	CDS	2590988	2591923	.	+	0	ID=cds2426;Parent=gene2738;Dbxref=Genbank:YP_404332.1,GeneID:3795499;Name=YP_404332.1;Note=Code: KL%3B COG: COG0553;gbkey=CDS;product=hypothetical protein;protein_id=YP_404332.1;transl_table=11
NC_007606.1	RefSeq	gene	2592117	2593513	.	-	.	ID=gene2739;Dbxref=GeneID:3795500;Name=SDY_2799;Note=SDY2799;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2799;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2593728	2593988	.	+	.	ID=gene2740;Dbxref=GeneID:3795502;Name=yfhL;Note=SDY2801;gbkey=Gene;gene=yfhL;gene_biotype=protein_coding;locus_tag=SDY_2801
NC_007606.1	RefSeq	CDS	2593728	2593988	.	+	0	ID=cds2427;Parent=gene2740;Dbxref=Genbank:YP_404335.1,GeneID:3795502;Name=YP_404335.1;Note=Code: C%3B COG: COG1145;gbkey=CDS;gene=yfhL;product=hypothetical protein;protein_id=YP_404335.1;transl_table=11
NC_007606.1	RefSeq	region	2594454	2595219	.	-	.	ID=id457;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2594468	2594863	.	-	.	ID=gene2741;Dbxref=GeneID:3795503;Name=SDY_2802;Note=SDY2802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2802
NC_007606.1	RefSeq	CDS	2594468	2594863	.	-	0	ID=cds2428;Parent=gene2741;Dbxref=Genbank:YP_404336.1,GeneID:3795503;Name=YP_404336.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404336.1;transl_table=11
NC_007606.1	RefSeq	gene	2594890	2595162	.	-	.	ID=gene2742;Dbxref=GeneID:18263117;Name=SDY_4728;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4728
NC_007606.1	RefSeq	CDS	2594890	2595162	.	-	0	ID=cds2429;Parent=gene2742;Dbxref=Genbank:YP_009000803.1,GeneID:18263117;Name=YP_009000803.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000803.1;transl_table=11
NC_007606.1	RefSeq	gene	2595458	2595838	.	-	.	ID=gene2743;Dbxref=GeneID:3795505;Name=acpS;Note=SDY2804;gbkey=Gene;gene=acpS;gene_biotype=protein_coding;locus_tag=SDY_2804
NC_007606.1	RefSeq	CDS	2595458	2595838	.	-	0	ID=cds2430;Parent=gene2743;Dbxref=Genbank:YP_404338.1,GeneID:3795505;Name=YP_404338.1;Note=''Catalyzes the formation of holo-ACP%2C which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids'';gbkey=CDS;gene=acpS;product=4'-phosphopantetheinyl transferase;protein_id=YP_404338.1;transl_table=11
NC_007606.1	RefSeq	gene	2595838	2596569	.	-	.	ID=gene2744;Dbxref=GeneID:3795506;Name=pdxJ;Note=SDY2805;gbkey=Gene;gene=pdxJ;gene_biotype=protein_coding;locus_tag=SDY_2805
NC_007606.1	RefSeq	CDS	2595838	2596569	.	-	0	ID=cds2431;Parent=gene2744;Dbxref=Genbank:YP_404339.1,GeneID:3795506;Name=YP_404339.1;Note=involved in the de novo synthesis of pyridoxine (Vitamin B6);gbkey=CDS;gene=pdxJ;product=pyridoxine 5'-phosphate synthase;protein_id=YP_404339.1;transl_table=11
NC_007606.1	RefSeq	gene	2596581	2597309	.	-	.	ID=gene2745;Dbxref=GeneID:3795507;Name=recO;Note=SDY2806;gbkey=Gene;gene=recO;gene_biotype=protein_coding;locus_tag=SDY_2806
NC_007606.1	RefSeq	CDS	2596581	2597309	.	-	0	ID=cds2432;Parent=gene2745;Dbxref=Genbank:YP_404340.1,GeneID:3795507;Name=YP_404340.1;Note=involved in DNA repair and RecFOR pathway recombination%3B RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA;gbkey=CDS;gene=recO;product=DNA repair protein RecO;protein_id=YP_404340.1;transl_table=11
NC_007606.1	RefSeq	gene	2597321	2598226	.	-	.	ID=gene2746;Dbxref=GeneID:3795508;Name=era;Note=SDY2807;gbkey=Gene;gene=era;gene_biotype=protein_coding;gene_synonym=bex,rbaA,sdgE,yqfH;locus_tag=SDY_2807
NC_007606.1	RefSeq	CDS	2597321	2598226	.	-	0	ID=cds2433;Parent=gene2746;Dbxref=Genbank:YP_404341.1,GeneID:3795508;Name=YP_404341.1;Note=Era%3B Escherichia coli Ras-like protein%3B Bex%3B Bacillus Era-complementing segment%3B essential protein in Escherichia coli that is involved in many cellular processes%3B GTPase%3B binds the cell membrane through apparent C-terminal domain%3B mutants are arrested during the cell cycle%3B Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome;gbkey=CDS;gene=era;product=GTP-binding protein Era;protein_id=YP_404341.1;transl_table=11
NC_007606.1	RefSeq	gene	2598223	2598903	.	-	.	ID=gene2747;Dbxref=GeneID:3795509;Name=rnc;Note=SDY2808;gbkey=Gene;gene=rnc;gene_biotype=protein_coding;locus_tag=SDY_2808
NC_007606.1	RefSeq	CDS	2598223	2598903	.	-	0	ID=cds2434;Parent=gene2747;Dbxref=Genbank:YP_404342.1,GeneID:3795509;Name=YP_404342.1;Note=cytoplasmic enzyme involved in processing rRNA and some mRNAs%3B substrates typically have dsRNA regions%3B forms a homodimer%3B have N-terminal nuclease and C-terminal RNA-binding domains%3B requires magnesium as preferred ion for activity;gbkey=CDS;gene=rnc;product=ribonuclease III;protein_id=YP_404342.1;transl_table=11
NC_007606.1	RefSeq	gene	2599176	2600150	.	-	.	ID=gene2748;Dbxref=GeneID:3795510;Name=lepB;Note=SDY2809;gbkey=Gene;gene=lepB;gene_biotype=protein_coding;locus_tag=SDY_2809
NC_007606.1	RefSeq	CDS	2599176	2600150	.	-	0	ID=cds2435;Parent=gene2748;Dbxref=Genbank:YP_404343.1,GeneID:3795510;Name=YP_404343.1;Note=catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins;gbkey=CDS;gene=lepB;product=signal peptidase I;protein_id=YP_404343.1;transl_table=11
NC_007606.1	RefSeq	gene	2600166	2601965	.	-	.	ID=gene2749;Dbxref=GeneID:3795511;Name=lepA;Note=SDY2810;gbkey=Gene;gene=lepA;gene_biotype=protein_coding;locus_tag=SDY_2810
NC_007606.1	RefSeq	CDS	2600166	2601965	.	-	0	ID=cds2436;Parent=gene2749;Dbxref=Genbank:YP_404344.1,GeneID:3795511;Name=YP_404344.1;Note=binds to the ribosome on the universally-conserved alpha-sarcin loop;gbkey=CDS;gene=lepA;product=GTP-binding protein LepA;protein_id=YP_404344.1;transl_table=11
NC_007606.1	RefSeq	gene	2602163	2602642	.	-	.	ID=gene2750;Dbxref=GeneID:3795512;Name=rseC;Note=SDY2811;gbkey=Gene;gene=rseC;gene_biotype=protein_coding;locus_tag=SDY_2811
NC_007606.1	RefSeq	CDS	2602163	2602642	.	-	0	ID=cds2437;Parent=gene2750;Dbxref=Genbank:YP_404345.1,GeneID:3795512;Name=YP_404345.1;Note=involved in the reduction of the SoxR iron-sulfur cluster;gbkey=CDS;gene=rseC;product=SoxR reducing system protein RseC;protein_id=YP_404345.1;transl_table=11
NC_007606.1	RefSeq	gene	2602639	2603595	.	-	.	ID=gene2751;Dbxref=GeneID:3795513;Name=rseB;Note=SDY2812;gbkey=Gene;gene=rseB;gene_biotype=protein_coding;locus_tag=SDY_2812
NC_007606.1	RefSeq	CDS	2602639	2603595	.	-	0	ID=cds2438;Parent=gene2751;Dbxref=Genbank:YP_404346.1,GeneID:3795513;Name=YP_404346.1;Note=periplasmic protein%3B interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP;gbkey=CDS;gene=rseB;product=periplasmic negative regulator of sigmaE;protein_id=YP_404346.1;transl_table=11
NC_007606.1	RefSeq	gene	2603595	2604245	.	-	.	ID=gene2752;Dbxref=GeneID:3795514;Name=rseA;Note=SDY2813;gbkey=Gene;gene=rseA;gene_biotype=protein_coding;locus_tag=SDY_2813
NC_007606.1	RefSeq	CDS	2603595	2604245	.	-	0	ID=cds2439;Parent=gene2752;Dbxref=Genbank:YP_404347.1,GeneID:3795514;Name=YP_404347.1;Note=Code: T%3B COG: COG3073;gbkey=CDS;gene=rseA;product=anti-RNA polymerase sigma factor SigE;protein_id=YP_404347.1;transl_table=11
NC_007606.1	RefSeq	gene	2604278	2604853	.	-	.	ID=gene2753;Dbxref=GeneID:3795515;Name=rpoE;Note=SDY2814;gbkey=Gene;gene=rpoE;gene_biotype=protein_coding;locus_tag=SDY_2814
NC_007606.1	RefSeq	CDS	2604278	2604853	.	-	0	ID=cds2440;Parent=gene2753;Dbxref=Genbank:YP_404348.1,GeneID:3795515;Name=YP_404348.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor is involved in heat shock and oxidative stress response;gbkey=CDS;gene=rpoE;product=RNA polymerase sigma factor RpoE;protein_id=YP_404348.1;transl_table=11
NC_007606.1	RefSeq	gene	2605261	2606883	.	+	.	ID=gene2754;Dbxref=GeneID:3795516;Name=nadB;Note=SDY2815;gbkey=Gene;gene=nadB;gene_biotype=protein_coding;locus_tag=SDY_2815
NC_007606.1	RefSeq	CDS	2605261	2606883	.	+	0	ID=cds2441;Parent=gene2754;Dbxref=Genbank:YP_404349.1,GeneID:3795516;Name=YP_404349.1;Note=catalyzes the formation of oxaloacetate from L-aspartate;gbkey=CDS;gene=nadB;product=L-aspartate oxidase;protein_id=YP_404349.1;transl_table=11
NC_007606.1	RefSeq	gene	2606868	2607725	.	-	.	ID=gene2755;Dbxref=GeneID:3795517;Name=yfiC;Note=SDY2816;gbkey=Gene;gene=yfiC;gene_biotype=protein_coding;locus_tag=SDY_2816
NC_007606.1	RefSeq	CDS	2606868	2607725	.	-	0	ID=cds2442;Parent=gene2755;Dbxref=Genbank:YP_404350.1,GeneID:3795517;Name=YP_404350.1;Note=Code: R%3B COG: COG4123;gbkey=CDS;gene=yfiC;product=O-methyltransferase;protein_id=YP_404350.1;transl_table=11
NC_007606.1	RefSeq	gene	2607737	2609071	.	+	.	ID=gene2756;Dbxref=GeneID:3795408;Name=srmB;Note=SDY2817;gbkey=Gene;gene=srmB;gene_biotype=protein_coding;locus_tag=SDY_2817
NC_007606.1	RefSeq	CDS	2607737	2609071	.	+	0	ID=cds2443;Parent=gene2756;Dbxref=Genbank:YP_404351.1,GeneID:3795408;Name=YP_404351.1;Note=facilitates an early step in the assembly of the 50S subunit of the ribosome;gbkey=CDS;gene=srmB;product=ATP-dependent RNA helicase SrmB;protein_id=YP_404351.1;transl_table=11
NC_007606.1	RefSeq	gene	2609104	2610030	.	-	.	ID=gene2757;Dbxref=GeneID:3795409;Name=yfiE;Note=SDY2818;gbkey=Gene;gene=yfiE;gene_biotype=protein_coding;locus_tag=SDY_2818
NC_007606.1	RefSeq	CDS	2609104	2610030	.	-	0	ID=cds2444;Parent=gene2757;Dbxref=Genbank:YP_404352.1,GeneID:3795409;Name=YP_404352.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=yfiE;product=LysR family transcriptional regulator;protein_id=YP_404352.1;transl_table=11
NC_007606.1	RefSeq	region	2610246	2611509	.	+	.	ID=id458;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2610310	2610612	.	+	.	ID=gene2758;Dbxref=GeneID:3795410;Name=SDY_2819;Note=SDY2819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2819
NC_007606.1	RefSeq	CDS	2610310	2610612	.	+	0	ID=cds2445;Parent=gene2758;Dbxref=Genbank:YP_404353.1,GeneID:3795410;Name=YP_404353.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_404353.1;transl_table=11
NC_007606.1	RefSeq	gene	2611478	2611867	.	+	.	ID=gene2759;Dbxref=GeneID:3795412;Name=yfiK;Note=SDY2821;gbkey=Gene;gene=yfiK;gene_biotype=protein_coding;locus_tag=SDY_2821
NC_007606.1	RefSeq	CDS	2611478	2611867	.	+	0	ID=cds2446;Parent=gene2759;Dbxref=Genbank:YP_404355.1,GeneID:3795412;Name=YP_404355.1;Note=Code: E%3B COG: COG1280;gbkey=CDS;gene=yfiK;product=hypothetical protein;protein_id=YP_404355.1;transl_table=11
NC_007606.1	RefSeq	gene	2611923	2612306	.	-	.	ID=gene2760;Dbxref=GeneID:3795413;Name=yfiD;Note=SDY2822;gbkey=Gene;gene=yfiD;gene_biotype=protein_coding;locus_tag=SDY_2822
NC_007606.1	RefSeq	CDS	2611923	2612306	.	-	0	ID=cds2447;Parent=gene2760;Dbxref=Genbank:YP_404356.1,GeneID:3795413;Name=YP_404356.1;Note=stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit;gbkey=CDS;gene=yfiD;product=autonomous glycyl radical cofactor GrcA;protein_id=YP_404356.1;transl_table=11
NC_007606.1	RefSeq	gene	2612610	2613299	.	+	.	ID=gene2761;Dbxref=GeneID:3795414;Name=ung;Note=SDY2823;gbkey=Gene;gene=ung;gene_biotype=protein_coding;locus_tag=SDY_2823
NC_007606.1	RefSeq	CDS	2612610	2613299	.	+	0	ID=cds2448;Parent=gene2761;Dbxref=Genbank:YP_404357.1,GeneID:3795414;Name=YP_404357.1;Note=Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine;gbkey=CDS;gene=ung;product=uracil-DNA glycosylase;protein_id=YP_404357.1;transl_table=11
NC_007606.1	RefSeq	gene	2613347	2614384	.	-	.	ID=gene2762;Dbxref=GeneID:3795415;Name=yfiF;Note=SDY2824;gbkey=Gene;gene=yfiF;gene_biotype=protein_coding;locus_tag=SDY_2824
NC_007606.1	RefSeq	CDS	2613347	2614384	.	-	0	ID=cds2449;Parent=gene2762;Dbxref=Genbank:YP_404358.1,GeneID:3795415;Name=YP_404358.1;Note=Code: J%3B COG: COG0566;gbkey=CDS;gene=yfiF;product=methyltransferase;protein_id=YP_404358.1;transl_table=11
NC_007606.1	RefSeq	gene	2614591	2615010	.	+	.	ID=gene2763;Dbxref=GeneID:3795416;Name=trxC;Note=SDY2825;gbkey=Gene;gene=trxC;gene_biotype=protein_coding;locus_tag=SDY_2825
NC_007606.1	RefSeq	CDS	2614591	2615010	.	+	0	ID=cds2450;Parent=gene2763;Dbxref=Genbank:YP_404359.1,GeneID:3795416;Name=YP_404359.1;Note=Code: OC%3B COG: COG0526;gbkey=CDS;gene=trxC;product=thioredoxin;protein_id=YP_404359.1;transl_table=11
NC_007606.1	RefSeq	gene	2615055	2615777	.	+	.	ID=gene2764;Dbxref=GeneID:3795417;Name=yfiP;Note=SDY2826;gbkey=Gene;gene=yfiP;gene_biotype=protein_coding;locus_tag=SDY_2826
NC_007606.1	RefSeq	CDS	2615055	2615777	.	+	0	ID=cds2451;Parent=gene2764;Dbxref=Genbank:YP_404360.1,GeneID:3795417;Name=YP_404360.1;Note=Code: S%3B COG: COG3148;gbkey=CDS;gene=yfiP;product=hypothetical protein;protein_id=YP_404360.1;transl_table=11
NC_007606.1	RefSeq	gene	2615809	2618469	.	+	.	ID=gene2765;Dbxref=GeneID:3795418;Name=yfiQ;Note=SDY2827;gbkey=Gene;gene=yfiQ;gene_biotype=protein_coding;locus_tag=SDY_2827
NC_007606.1	RefSeq	CDS	2615809	2618469	.	+	0	ID=cds2452;Parent=gene2765;Dbxref=Genbank:YP_404361.1,GeneID:3795418;Name=YP_404361.1;Note=Code: C%3B COG: COG1042;gbkey=CDS;gene=yfiQ;product=hypothetical protein;protein_id=YP_404361.1;transl_table=11
NC_007606.1	RefSeq	gene	2618580	2619938	.	+	.	ID=gene2766;Dbxref=GeneID:3795419;Name=pssA;Note=SDY2828;gbkey=Gene;gene=pssA;gene_biotype=protein_coding;locus_tag=SDY_2828
NC_007606.1	RefSeq	CDS	2618580	2619938	.	+	0	ID=cds2453;Parent=gene2766;Dbxref=Genbank:YP_404362.1,GeneID:3795419;Name=YP_404362.1;Note=catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine%3B bounds to the ribosome;gbkey=CDS;gene=pssA;product=phosphatidylserine synthase;protein_id=YP_404362.1;transl_table=11
NC_007606.1	RefSeq	gene	2620011	2620307	.	+	.	ID=gene2767;Dbxref=GeneID:3795420;Name=yfiM;Note=SDY2829;gbkey=Gene;gene=yfiM;gene_biotype=protein_coding;locus_tag=SDY_2829
NC_007606.1	RefSeq	CDS	2620011	2620307	.	+	0	ID=cds2454;Parent=gene2767;Dbxref=Genbank:YP_404363.1,GeneID:3795420;Name=YP_404363.1;Note=Code: R%3B COG: COG5544;gbkey=CDS;gene=yfiM;product=hypothetical protein;protein_id=YP_404363.1;transl_table=11
NC_007606.1	RefSeq	gene	2620304	2621602	.	-	.	ID=gene2768;Dbxref=GeneID:3795421;Name=kgtP;Note=SDY2830;gbkey=Gene;gene=kgtP;gene_biotype=protein_coding;locus_tag=SDY_2830
NC_007606.1	RefSeq	CDS	2620304	2621602	.	-	0	ID=cds2455;Parent=gene2768;Dbxref=Genbank:YP_404364.1,GeneID:3795421;Name=YP_404364.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=kgtP;product=alpha-ketoglutarate transporter;protein_id=YP_404364.1;transl_table=11
NC_007606.1	RefSeq	gene	2621924	2622042	.	-	.	ID=gene2769;Dbxref=GeneID:3795422;Name=rrfG;Note=SDY2831;gbkey=Gene;gene=rrfG;gene_biotype=rRNA;locus_tag=SDY_2831
NC_007606.1	RefSeq	rRNA	2621924	2622042	.	-	.	ID=rna48;Parent=gene2769;Dbxref=GeneID:3795422;gbkey=rRNA;gene=rrfG;product=5S ribosomal RNA
NC_007606.1	RefSeq	exon	2621924	2622042	.	-	.	ID=id459;Parent=rna48;Dbxref=GeneID:3795422;gbkey=rRNA;gene=rrfG;product=5S ribosomal RNA
NC_007606.1	RefSeq	gene	2622136	2625037	.	-	.	ID=gene2770;Dbxref=GeneID:3795423;Name=rrlG;Note=SDY2832;gbkey=Gene;gene=rrlG;gene_biotype=rRNA;locus_tag=SDY_2832
NC_007606.1	RefSeq	rRNA	2622136	2625037	.	-	.	ID=rna49;Parent=gene2770;Dbxref=GeneID:3795423;gbkey=rRNA;gene=rrlG;product=23S ribosomal RNA
NC_007606.1	RefSeq	exon	2622136	2625037	.	-	.	ID=id460;Parent=rna49;Dbxref=GeneID:3795423;gbkey=rRNA;gene=rrlG;product=23S ribosomal RNA
NC_007606.1	RefSeq	gene	2625222	2625297	.	-	.	ID=gene2771;Dbxref=GeneID:3795424;Name=SDY_2833;Note=SDY2833;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2833
NC_007606.1	RefSeq	tRNA	2625222	2625297	.	-	.	ID=rna50;Parent=gene2771;Dbxref=GeneID:3795424;codons=58;gbkey=tRNA;product=tRNA-Glu
NC_007606.1	RefSeq	exon	2625222	2625297	.	-	.	ID=id461;Parent=rna50;Dbxref=GeneID:3795424;codons=58;gbkey=tRNA;product=tRNA-Glu
NC_007606.1	RefSeq	gene	2625384	2626925	.	-	.	ID=gene2772;Dbxref=GeneID:3796208;Name=rrsG;Note=SDY2834;gbkey=Gene;gene=rrsG;gene_biotype=rRNA;locus_tag=SDY_2834
NC_007606.1	RefSeq	rRNA	2625384	2626925	.	-	.	ID=rna51;Parent=gene2772;Dbxref=GeneID:3796208;gbkey=rRNA;gene=rrsG;product=16S ribosomal RNA
NC_007606.1	RefSeq	exon	2625384	2626925	.	-	.	ID=id462;Parent=rna51;Dbxref=GeneID:3796208;gbkey=rRNA;gene=rrsG;product=16S ribosomal RNA
NC_007606.1	RefSeq	gene	2627369	2629942	.	-	.	ID=gene2773;Dbxref=GeneID:3796209;Name=clpB;Note=SDY2835;gbkey=Gene;gene=clpB;gene_biotype=protein_coding;locus_tag=SDY_2835
NC_007606.1	RefSeq	CDS	2627369	2629942	.	-	0	ID=cds2456;Parent=gene2773;Dbxref=Genbank:YP_404365.1,GeneID:3796209;Name=YP_404365.1;Note=Code: O%3B COG: COG0542;gbkey=CDS;gene=clpB;product=protein disaggregation chaperone;protein_id=YP_404365.1;transl_table=11
NC_007606.1	RefSeq	gene	2630072	2630803	.	-	.	ID=gene2774;Dbxref=GeneID:3796210;Name=yfiH;Note=SDY2836;gbkey=Gene;gene=yfiH;gene_biotype=protein_coding;locus_tag=SDY_2836
NC_007606.1	RefSeq	CDS	2630072	2630803	.	-	0	ID=cds2457;Parent=gene2774;Dbxref=Genbank:YP_404366.1,GeneID:3796210;Name=YP_404366.1;Note=Code: S%3B COG: COG1496;gbkey=CDS;gene=yfiH;product=hypothetical protein;protein_id=YP_404366.1;transl_table=11
NC_007606.1	RefSeq	gene	2630800	2631780	.	-	.	ID=gene2775;Dbxref=GeneID:3796211;Name=rluD;Note=SDY2837;gbkey=Gene;gene=rluD;gene_biotype=protein_coding;locus_tag=SDY_2837
NC_007606.1	RefSeq	CDS	2630800	2631780	.	-	0	ID=cds2458;Parent=gene2775;Dbxref=Genbank:YP_404367.1,GeneID:3796211;Name=YP_404367.1;Note=''responsible for synthesis of pseudouridine from uracil at positions 1911%2C 1915 and 1917 in 23S ribosomal RNA'';gbkey=CDS;gene=rluD;product=23S rRNA pseudouridine synthase D;protein_id=YP_404367.1;transl_table=11
NC_007606.1	RefSeq	gene	2631915	2632652	.	+	.	ID=gene2776;Dbxref=GeneID:3796212;Name=SDY_2838;Note=SDY2838;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2838
NC_007606.1	RefSeq	CDS	2631915	2632652	.	+	0	ID=cds2459;Parent=gene2776;Dbxref=Genbank:YP_404368.1,GeneID:3796212;Name=YP_404368.1;Note=''with YaeT%2C NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane%3B involved in resistance to ampicillin and tetracycline'';gbkey=CDS;product=outer membrane protein assembly complex subunit YfiO;protein_id=YP_404368.1;transl_table=11
NC_007606.1	RefSeq	region	2632689	2634116	.	-	.	ID=id463;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2632703	2634049	.	-	.	ID=gene2777;Dbxref=GeneID:3796213;Name=SDY_2839;Note=SDY2839;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2839
NC_007606.1	RefSeq	CDS	2632703	2634049	.	-	0	ID=cds2460;Parent=gene2777;Dbxref=Genbank:YP_404369.1,GeneID:3796213;Name=YP_404369.1;Note=Code: L%3B COG: COG3385;gbkey=CDS;product=insertion sequence element IS4 transposase InsG;protein_id=YP_404369.1;transl_table=11
NC_007606.1	RefSeq	gene	2634493	2634813	.	+	.	ID=gene2778;Dbxref=GeneID:3796215;Name=SDY_2841;Note=SDY2841;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2841
NC_007606.1	RefSeq	CDS	2634493	2634813	.	+	0	ID=cds2461;Parent=gene2778;Dbxref=Genbank:YP_404371.1,GeneID:3796215;Name=YP_404371.1;Note=Code: L%3B COG: COG3436;gbkey=CDS;product=insertion sequence element ISSfl4 ORF2;protein_id=YP_404371.1;transl_table=11
NC_007606.1	RefSeq	region	2634538	2634793	.	-	.	ID=id464;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2635051	2635881	.	-	.	ID=gene2779;Dbxref=GeneID:3796216;Name=SDY_2842;Note=SDY2842;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2842
NC_007606.1	RefSeq	CDS	2635051	2635881	.	-	0	ID=cds2462;Parent=gene2779;Dbxref=Genbank:YP_404372.1,GeneID:3796216;Name=YP_404372.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_404372.1;transl_table=11
NC_007606.1	RefSeq	region	2635123	2636388	.	-	.	ID=id465;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2636022	2636324	.	-	.	ID=gene2780;Dbxref=GeneID:3796217;Name=SDY_2843;Note=SDY2843;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2843
NC_007606.1	RefSeq	CDS	2636022	2636324	.	-	0	ID=cds2463;Parent=gene2780;Dbxref=Genbank:YP_404373.1,GeneID:3796217;Name=YP_404373.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_404373.1;transl_table=11
NC_007606.1	RefSeq	gene	2636520	2636681	.	+	.	ID=gene2781;Dbxref=GeneID:18263118;Name=SDY_2844a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2844a
NC_007606.1	RefSeq	CDS	2636520	2636681	.	+	0	ID=cds2464;Parent=gene2781;Dbxref=Genbank:YP_009000804.1,GeneID:18263118;Name=YP_009000804.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_009000804.1;transl_table=11
NC_007606.1	RefSeq	region	2636730	2637672	.	-	.	ID=id466;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2637298	2637600	.	-	.	ID=gene2782;Dbxref=GeneID:3796219;Name=SDY_2845;Note=SDY2845;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2845
NC_007606.1	RefSeq	CDS	2637298	2637600	.	-	0	ID=cds2465;Parent=gene2782;Dbxref=Genbank:YP_404375.1,GeneID:3796219;Name=YP_404375.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_404375.1;transl_table=11
NC_007606.1	RefSeq	gene	2637670	2638437	.	-	.	ID=gene2783;Dbxref=GeneID:3796220;Name=SDY_2846;Note=SDY2846;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2846
NC_007606.1	RefSeq	CDS	2637670	2638437	.	-	0	ID=cds2466;Parent=gene2783;Dbxref=Genbank:YP_404376.1,GeneID:3796220;Name=YP_404376.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=hypothetical protein;protein_id=YP_404376.1;transl_table=11
NC_007606.1	RefSeq	region	2638528	2639295	.	-	.	ID=id467;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2638542	2638937	.	-	.	ID=gene2784;Dbxref=GeneID:3796221;Name=SDY_2847;Note=SDY2847;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2847
NC_007606.1	RefSeq	CDS	2638542	2638937	.	-	0	ID=cds2467;Parent=gene2784;Dbxref=Genbank:YP_404377.1,GeneID:3796221;Name=YP_404377.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404377.1;transl_table=11
NC_007606.1	RefSeq	gene	2638964	2639236	.	-	.	ID=gene2785;Dbxref=GeneID:18263119;Name=SDY_4729;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4729
NC_007606.1	RefSeq	CDS	2638964	2639236	.	-	0	ID=cds2468;Parent=gene2785;Dbxref=Genbank:YP_009000805.1,GeneID:18263119;Name=YP_009000805.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000805.1;transl_table=11
NC_007606.1	RefSeq	gene	2639272	2639802	.	-	.	ID=gene2786;Dbxref=GeneID:3796222;Name=SDY_2848;Note=SDY2848;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2848
NC_007606.1	RefSeq	CDS	2639272	2639802	.	-	0	ID=cds2469;Parent=gene2786;Dbxref=Genbank:YP_404378.1,GeneID:3796222;Name=YP_404378.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404378.1;transl_table=11
NC_007606.1	RefSeq	region	2639824	2640591	.	-	.	ID=id468;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2639839	2640216	.	-	.	ID=gene2787;Dbxref=GeneID:3796223;Name=insB;Note=SDY2849;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2849
NC_007606.1	RefSeq	CDS	2639839	2640216	.	-	0	ID=cds2470;Parent=gene2787;Dbxref=Genbank:YP_404379.1,GeneID:3796223;Name=YP_404379.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404379.1;transl_table=11
NC_007606.1	RefSeq	gene	2640261	2640536	.	-	.	ID=gene2788;Dbxref=GeneID:3796224;Name=insA;Note=SDY2850;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2850
NC_007606.1	RefSeq	CDS	2640261	2640536	.	-	0	ID=cds2471;Parent=gene2788;Dbxref=Genbank:YP_404380.1,GeneID:3796224;Name=YP_404380.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404380.1;transl_table=11
NC_007606.1	RefSeq	gene	2640604	2640846	.	+	.	ID=gene2789;Dbxref=GeneID:3796225;Name=gabD;Note=''SDY2851%3B truncated%3B original product: succinate-semialdehyde dehydrogenase%2C NADP-dependent activity'';gbkey=Gene;gene=gabD;gene_biotype=pseudogene;locus_tag=SDY_2851;pseudo=true
NC_007606.1	RefSeq	gene	2640860	2642139	.	+	.	ID=gene2790;Dbxref=GeneID:3796226;Name=gabT;Note=SDY2852%3B frameshift%3B original product: 4-aminobutyrate aminotransferase activity;gbkey=Gene;gene=gabT;gene_biotype=pseudogene;locus_tag=SDY_2852;pseudo=true
NC_007606.1	RefSeq	gene	2642377	2643777	.	+	.	ID=gene2791;Dbxref=GeneID:3796131;Name=gabP;Note=SDY2853;gbkey=Gene;gene=gabP;gene_biotype=protein_coding;locus_tag=SDY_2853
NC_007606.1	RefSeq	CDS	2642377	2643777	.	+	0	ID=cds2472;Parent=gene2791;Dbxref=Genbank:YP_404381.1,GeneID:3796131;Name=YP_404381.1;Note=Code: E%3B COG: COG1113;gbkey=CDS;gene=gabP;product=gamma-aminobutyrate transporter;protein_id=YP_404381.1;transl_table=11
NC_007606.1	RefSeq	gene	2643798	2644460	.	+	.	ID=gene2792;Dbxref=GeneID:3796132;Name=ygaE;Note=SDY2854;gbkey=Gene;gene=ygaE;gene_biotype=protein_coding;locus_tag=SDY_2854
NC_007606.1	RefSeq	CDS	2643798	2644460	.	+	0	ID=cds2473;Parent=gene2792;Dbxref=Genbank:YP_404382.2,GeneID:3796132;Name=YP_404382.2;Note=regulator of gab gene expression;gbkey=CDS;gene=ygaE;product=DNA-binding transcriptional regulator CsiR;protein_id=YP_404382.2;transl_table=11
NC_007606.1	RefSeq	gene	2644461	2644910	.	-	.	ID=gene2793;Dbxref=GeneID:3796133;Name=ygaU;Note=SDY2855;gbkey=Gene;gene=ygaU;gene_biotype=protein_coding;locus_tag=SDY_2855
NC_007606.1	RefSeq	CDS	2644461	2644910	.	-	0	ID=cds2474;Parent=gene2793;Dbxref=Genbank:YP_404383.1,GeneID:3796133;Name=YP_404383.1;Note=Code: S%3B COG: COG1652;gbkey=CDS;gene=ygaU;product=LysM domain/BON superfamily protein;protein_id=YP_404383.1;transl_table=11
NC_007606.1	RefSeq	gene	2644994	2645152	.	-	.	ID=gene2794;Dbxref=GeneID:3796134;Name=SDY_2856;Note=SDY2856;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2856
NC_007606.1	RefSeq	CDS	2644994	2645152	.	-	0	ID=cds2475;Parent=gene2794;Dbxref=Genbank:YP_404384.1,GeneID:3796134;Name=YP_404384.1;Note=Code: S%3B COG: COG0401;gbkey=CDS;product=hypothetical protein;protein_id=YP_404384.1;transl_table=11
NC_007606.1	RefSeq	gene	2645335	2645634	.	+	.	ID=gene2795;Dbxref=GeneID:3796135;Name=SDY_2857;Note=SDY2857;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2857
NC_007606.1	RefSeq	CDS	2645335	2645634	.	+	0	ID=cds2476;Parent=gene2795;Dbxref=Genbank:YP_404385.1,GeneID:3796135;Name=YP_404385.1;Note=Code: K%3B COG: COG0640;gbkey=CDS;product=hypothetical protein;protein_id=YP_404385.1;transl_table=11
NC_007606.1	RefSeq	gene	2645644	2646162	.	+	.	ID=gene2796;Dbxref=GeneID:3796136;Name=ygaP;Note=SDY2858;gbkey=Gene;gene=ygaP;gene_biotype=protein_coding;locus_tag=SDY_2858
NC_007606.1	RefSeq	CDS	2645644	2646162	.	+	0	ID=cds2477;Parent=gene2796;Dbxref=Genbank:YP_404386.1,GeneID:3796136;Name=YP_404386.1;Note=Code: P%3B COG: COG0607;gbkey=CDS;gene=ygaP;product=hypothetical protein;protein_id=YP_404386.1;transl_table=11
NC_007606.1	RefSeq	gene	2646215	2646619	.	-	.	ID=gene2797;Dbxref=GeneID:3796137;Name=stpA;Note=SDY2859;gbkey=Gene;gene=stpA;gene_biotype=protein_coding;locus_tag=SDY_2859
NC_007606.1	RefSeq	CDS	2646215	2646619	.	-	0	ID=cds2478;Parent=gene2797;Dbxref=Genbank:YP_404387.1,GeneID:3796137;Name=YP_404387.1;Note=Code: R%3B COG: COG2916;gbkey=CDS;gene=stpA;product=DNA binding protein;protein_id=YP_404387.1;transl_table=11
NC_007606.1	RefSeq	gene	2647288	2647737	.	+	.	ID=gene2798;Dbxref=GeneID:3796138;Name=SDY_2860;Note=SDY2860;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2860
NC_007606.1	RefSeq	CDS	2647288	2647737	.	+	0	ID=cds2479;Parent=gene2798;Dbxref=Genbank:YP_404388.1,GeneID:3796138;Name=YP_404388.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404388.1;transl_table=11
NC_007606.1	RefSeq	region	2647801	2648567	.	+	.	ID=id469;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2647858	2648130	.	+	.	ID=gene2799;Dbxref=GeneID:18263120;Name=SDY_4730;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4730
NC_007606.1	RefSeq	CDS	2647858	2648130	.	+	0	ID=cds2480;Parent=gene2799;Dbxref=Genbank:YP_009000806.1,GeneID:18263120;Name=YP_009000806.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000806.1;transl_table=11
NC_007606.1	RefSeq	gene	2648157	2648553	.	+	.	ID=gene2800;Dbxref=GeneID:3796139;Name=SDY_2861;Note=SDY2861;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2861;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2648528	2648893	.	-	.	ID=gene2801;Dbxref=GeneID:3796140;Name=ygaC;Note=SDY2862;gbkey=Gene;gene=ygaC;gene_biotype=protein_coding;locus_tag=SDY_2862
NC_007606.1	RefSeq	CDS	2648528	2648893	.	-	0	ID=cds2481;Parent=gene2801;Dbxref=Genbank:YP_404390.1,GeneID:3796140;Name=YP_404390.1;gbkey=CDS;gene=ygaC;product=hypothetical protein;protein_id=YP_404390.1;transl_table=11
NC_007606.1	RefSeq	gene	2649033	2649374	.	+	.	ID=gene2802;Dbxref=GeneID:3796141;Name=ygaM;Note=SDY2863;gbkey=Gene;gene=ygaM;gene_biotype=protein_coding;locus_tag=SDY_2863
NC_007606.1	RefSeq	CDS	2649033	2649374	.	+	0	ID=cds2482;Parent=gene2802;Dbxref=Genbank:YP_404391.1,GeneID:3796141;Name=YP_404391.1;Note=Code: S%3B COG: COG4575;gbkey=CDS;gene=ygaM;product=hypothetical protein;protein_id=YP_404391.1;transl_table=11
NC_007606.1	RefSeq	gene	2649524	2650858	.	-	.	ID=gene2803;Dbxref=GeneID:3796142;Name=SDY_2864;Note=SDY2864;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2864
NC_007606.1	RefSeq	CDS	2649524	2650858	.	-	0	ID=cds2483;Parent=gene2803;Dbxref=Genbank:YP_404392.1,GeneID:3796142;Name=YP_404392.1;Note=Code: KE%3B COG: COG1167;gbkey=CDS;product=transcriptional regulator;protein_id=YP_404392.1;transl_table=11
NC_007606.1	RefSeq	gene	2650946	2651377	.	+	.	ID=gene2804;Dbxref=GeneID:3796143;Name=SDY_2865;Note=SDY2865;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2865
NC_007606.1	RefSeq	CDS	2650946	2651377	.	+	0	ID=cds2484;Parent=gene2804;Dbxref=Genbank:YP_404393.1,GeneID:3796143;Name=YP_404393.1;Note=Code: S%3B COG: COG2128;gbkey=CDS;product=hypothetical protein;protein_id=YP_404393.1;transl_table=11
NC_007606.1	RefSeq	gene	2651587	2651832	.	+	.	ID=gene2805;Dbxref=GeneID:3796144;Name=nrdH;Note=SDY2866;gbkey=Gene;gene=nrdH;gene_biotype=protein_coding;locus_tag=SDY_2866
NC_007606.1	RefSeq	CDS	2651587	2651832	.	+	0	ID=cds2485;Parent=gene2805;Dbxref=Genbank:YP_404394.1,GeneID:3796144;Name=YP_404394.1;Note=Code: O%3B COG: COG0695;gbkey=CDS;gene=nrdH;product=glutaredoxin-like protein;protein_id=YP_404394.1;transl_table=11
NC_007606.1	RefSeq	gene	2651829	2652239	.	+	.	ID=gene2806;Dbxref=GeneID:3796145;Name=nrdI;Note=SDY2867;gbkey=Gene;gene=nrdI;gene_biotype=protein_coding;locus_tag=SDY_2867
NC_007606.1	RefSeq	CDS	2651829	2652239	.	+	0	ID=cds2486;Parent=gene2806;Dbxref=Genbank:YP_404395.1,GeneID:3796145;Name=YP_404395.1;Note=in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF;gbkey=CDS;gene=nrdI;product=ribonucleotide reductase stimulatory protein;protein_id=YP_404395.1;transl_table=11
NC_007606.1	RefSeq	gene	2652212	2654356	.	+	.	ID=gene2807;Dbxref=GeneID:3796146;Name=SDY_2868;Note=SDY2868;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2868;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2654366	2655334	.	+	.	ID=gene2808;Dbxref=GeneID:3796147;Name=nrdF;Note=SDY2869;gbkey=Gene;gene=nrdF;gene_biotype=protein_coding;locus_tag=SDY_2869
NC_007606.1	RefSeq	CDS	2654366	2655334	.	+	0	ID=cds2487;Parent=gene2808;Dbxref=Genbank:YP_404397.1,GeneID:3796147;Name=YP_404397.1;Note=B2 or R2 protein%3B type 1b enzyme%3B catalyzes the rate-limiting step in dNTP synthesis%3B converts nucleotides to deoxynucleotides%3B forms a homodimer and then a multimeric complex with NrdE;gbkey=CDS;gene=nrdF;product=ribonucleotide-diphosphate reductase subunit beta;protein_id=YP_404397.1;transl_table=11
NC_007606.1	RefSeq	region	2655313	2656080	.	-	.	ID=id470;gbkey=mobile_element;gene=nrdF
NC_007606.1	RefSeq	gene	2655328	2655705	.	-	.	ID=gene2809;Dbxref=GeneID:3796148;Name=insB;Note=SDY2870;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2870
NC_007606.1	RefSeq	CDS	2655328	2655705	.	-	0	ID=cds2488;Parent=gene2809;Dbxref=Genbank:YP_404398.1,GeneID:3796148;Name=YP_404398.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404398.1;transl_table=11
NC_007606.1	RefSeq	gene	2655750	2656025	.	-	.	ID=gene2810;Dbxref=GeneID:3796149;Name=insA;Note=SDY2871;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2871
NC_007606.1	RefSeq	CDS	2655750	2656025	.	-	0	ID=cds2489;Parent=gene2810;Dbxref=Genbank:YP_404399.1,GeneID:3796149;Name=YP_404399.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404399.1;transl_table=11
NC_007606.1	RefSeq	gene	2656201	2657226	.	+	.	ID=gene2811;Dbxref=GeneID:3799634;Name=proV;Note=SDY2872;gbkey=Gene;gene=proV;gene_biotype=protein_coding;locus_tag=SDY_2872
NC_007606.1	RefSeq	CDS	2656201	2657226	.	+	0	ID=cds2490;Parent=gene2811;Dbxref=Genbank:YP_404400.1,GeneID:3799634;Name=YP_404400.1;Note=Code: E%3B COG: COG4175;gbkey=CDS;gene=proV;product=glycine%2C betaine and proline ABC transporter ATP-binding protein;protein_id=YP_404400.1;transl_table=11
NC_007606.1	RefSeq	gene	2657219	2658283	.	+	.	ID=gene2812;Dbxref=GeneID:3799635;Name=proW;Note=SDY2873;gbkey=Gene;gene=proW;gene_biotype=protein_coding;locus_tag=SDY_2873
NC_007606.1	RefSeq	CDS	2657219	2658283	.	+	0	ID=cds2491;Parent=gene2812;Dbxref=Genbank:YP_404401.1,GeneID:3799635;Name=YP_404401.1;Note=with ProVX is involved in the high-affinity uptake of glycine betaine;gbkey=CDS;gene=proW;product=glycine betaine transporter membrane protein;protein_id=YP_404401.1;transl_table=11
NC_007606.1	RefSeq	region	2658382	2659147	.	-	.	ID=id471;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2658396	2658791	.	-	.	ID=gene2813;Dbxref=GeneID:3799636;Name=SDY_2874;Note=SDY2874;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2874
NC_007606.1	RefSeq	CDS	2658396	2658791	.	-	0	ID=cds2492;Parent=gene2813;Dbxref=Genbank:YP_404402.1,GeneID:3799636;Name=YP_404402.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404402.1;transl_table=11
NC_007606.1	RefSeq	gene	2658818	2659090	.	-	.	ID=gene2814;Dbxref=GeneID:18263121;Name=SDY_4732;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4732
NC_007606.1	RefSeq	CDS	2658818	2659090	.	-	0	ID=cds2493;Parent=gene2814;Dbxref=Genbank:YP_009000807.1,GeneID:18263121;Name=YP_009000807.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000807.1;transl_table=11
NC_007606.1	RefSeq	gene	2659070	2660106	.	+	.	ID=gene2815;Dbxref=GeneID:3799637;Name=proX;Note=SDY2875%3B frameshift%3B original product: high-affinity transport system for glycine betaine and proline;gbkey=Gene;gene=proX;gene_biotype=pseudogene;locus_tag=SDY_2875;pseudo=true
NC_007606.1	RefSeq	gene	2660298	2661482	.	+	.	ID=gene2816;Dbxref=GeneID:3799638;Name=SDY_2876;Note=SDY2876;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2876
NC_007606.1	RefSeq	CDS	2660298	2661482	.	+	0	ID=cds2494;Parent=gene2816;Dbxref=Genbank:YP_404403.1,GeneID:3799638;Name=YP_404403.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;product=permease;protein_id=YP_404403.1;transl_table=11
NC_007606.1	RefSeq	gene	2661606	2662343	.	+	.	ID=gene2817;Dbxref=GeneID:3799639;Name=SDY_2877;Note=SDY2877;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2877
NC_007606.1	RefSeq	CDS	2661606	2662343	.	+	0	ID=cds2495;Parent=gene2817;Dbxref=Genbank:YP_404404.1,GeneID:3799639;Name=YP_404404.1;Note=Code: E%3B COG: COG1296;gbkey=CDS;product=hypothetical protein;protein_id=YP_404404.1;transl_table=11
NC_007606.1	RefSeq	gene	2662333	2662668	.	+	.	ID=gene2818;Dbxref=GeneID:3799640;Name=ygaH;Note=SDY2878;gbkey=Gene;gene=ygaH;gene_biotype=protein_coding;locus_tag=SDY_2878
NC_007606.1	RefSeq	CDS	2662333	2662668	.	+	0	ID=cds2496;Parent=gene2818;Dbxref=Genbank:YP_404405.1,GeneID:3799640;Name=YP_404405.1;gbkey=CDS;gene=ygaH;product=hypothetical protein;protein_id=YP_404405.1;transl_table=11
NC_007606.1	RefSeq	gene	2662759	2663289	.	+	.	ID=gene2819;Dbxref=GeneID:3799641;Name=emrR;Note=SDY2879;gbkey=Gene;gene=emrR;gene_biotype=protein_coding;locus_tag=SDY_2879
NC_007606.1	RefSeq	CDS	2662759	2663289	.	+	0	ID=cds2497;Parent=gene2819;Dbxref=Genbank:YP_404406.1,GeneID:3799641;Name=YP_404406.1;Note=DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux%3B negative regulator of the multidrug operon emrAB;gbkey=CDS;gene=emrR;product=transcriptional repressor MprA;protein_id=YP_404406.1;transl_table=11
NC_007606.1	RefSeq	gene	2663416	2664588	.	+	.	ID=gene2820;Dbxref=GeneID:3799642;Name=emrA;Note=SDY2880;gbkey=Gene;gene=emrA;gene_biotype=protein_coding;locus_tag=SDY_2880
NC_007606.1	RefSeq	CDS	2663416	2664588	.	+	0	ID=cds2498;Parent=gene2820;Dbxref=Genbank:YP_404407.1,GeneID:3799642;Name=YP_404407.1;Note=Code: V%3B COG: COG1566;gbkey=CDS;gene=emrA;product=multidrug resistance secretion protein;protein_id=YP_404407.1;transl_table=11
NC_007606.1	RefSeq	gene	2664605	2666143	.	+	.	ID=gene2821;Dbxref=GeneID:3799643;Name=emrB;Note=SDY2881%3B contains in-frame stop codon%3B original product: multidrug resistance%3B probably membrane translocase;gbkey=Gene;gene=emrB;gene_biotype=pseudogene;locus_tag=SDY_2881;pseudo=true
NC_007606.1	RefSeq	gene	2666401	2667108	.	+	.	ID=gene2822;Dbxref=GeneID:3799644;Name=SDY_2882;Note=SDY2882;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2882
NC_007606.1	RefSeq	CDS	2666401	2667108	.	+	0	ID=cds2499;Parent=gene2822;Dbxref=Genbank:YP_404408.1,GeneID:3799644;Name=YP_404408.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404408.1;transl_table=11
NC_007606.1	RefSeq	gene	2667174	2668217	.	+	.	ID=gene2823;Dbxref=GeneID:3799645;Name=SDY_2883;Note=SDY2883;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2883
NC_007606.1	RefSeq	CDS	2667174	2668217	.	+	0	ID=cds2500;Parent=gene2823;Dbxref=Genbank:YP_404409.1,GeneID:3799645;Name=YP_404409.1;Note=Code: J%3B COG: COG0617;gbkey=CDS;product=hypothetical protein;protein_id=YP_404409.1;transl_table=11
NC_007606.1	RefSeq	gene	2668266	2668781	.	-	.	ID=gene2824;Dbxref=GeneID:3799646;Name=ygaG;Note=SDY2884;gbkey=Gene;gene=ygaG;gene_biotype=protein_coding;locus_tag=SDY_2884
NC_007606.1	RefSeq	CDS	2668266	2668781	.	-	0	ID=cds2501;Parent=gene2824;Dbxref=Genbank:YP_404410.1,GeneID:3799646;Name=YP_404410.1;Note=catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2;gbkey=CDS;gene=ygaG;product=S-ribosylhomocysteinase;protein_id=YP_404410.1;transl_table=11
NC_007606.1	RefSeq	gene	2668931	2670487	.	-	.	ID=gene2825;Dbxref=GeneID:3799647;Name=gshA;Note=SDY2885;gbkey=Gene;gene=gshA;gene_biotype=protein_coding;locus_tag=SDY_2885
NC_007606.1	RefSeq	CDS	2668931	2670487	.	-	0	ID=cds2502;Parent=gene2825;Dbxref=Genbank:YP_404411.1,GeneID:3799647;Name=YP_404411.1;Note=involved in the first step of glutathione biosynthesis;gbkey=CDS;gene=gshA;product=glutamate--cysteine ligase;protein_id=YP_404411.1;transl_table=11
NC_007606.1	RefSeq	gene	2670560	2670987	.	-	.	ID=gene2826;Dbxref=GeneID:3799648;Name=SDY_2886;Note=SDY2886;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2886;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2670984	2671550	.	-	.	ID=gene2827;Dbxref=GeneID:3799649;Name=yqaB;Note=SDY2887;gbkey=Gene;gene=yqaB;gene_biotype=protein_coding;locus_tag=SDY_2887;pseudogene=unknown
NC_007606.1	RefSeq	CDS	2670984	2671550	.	-	0	ID=cds2503;Parent=gene2827;Dbxref=Genbank:YP_404413.1,GeneID:3799649;Name=YP_404413.1;Note=''YqaB%3B catalyzes the dephosphorylation of fructose 1-phosphate%2C 6-phosphogluconate and p-nitrophenyl phosphate (pNPP)%3B presents beta-phosphoglucomutase activity at a lower extent'';gbkey=CDS;gene=yqaB;product=fructose-1-phosphatase;protein_id=YP_404413.1;transl_table=11
NC_007606.1	RefSeq	gene	2671698	2671774	.	-	.	ID=gene2828;Dbxref=GeneID:3799650;Name=SDY_2888;Note=SDY2888;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2888
NC_007606.1	RefSeq	tRNA	2671698	2671774	.	-	.	ID=rna52;Parent=gene2828;Dbxref=GeneID:3799650;codons=28;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	exon	2671698	2671774	.	-	.	ID=id472;Parent=rna52;Dbxref=GeneID:3799650;codons=28;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	gene	2671973	2672049	.	-	.	ID=gene2829;Dbxref=GeneID:3799651;Name=SDY_2889;Note=SDY2889;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2889
NC_007606.1	RefSeq	tRNA	2671973	2672049	.	-	.	ID=rna53;Parent=gene2829;Dbxref=GeneID:3799651;codons=28;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	exon	2671973	2672049	.	-	.	ID=id473;Parent=rna53;Dbxref=GeneID:3799651;codons=28;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	gene	2672245	2672321	.	-	.	ID=gene2830;Dbxref=GeneID:3796617;Name=SDY_2890;Note=SDY2890;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2890
NC_007606.1	RefSeq	tRNA	2672245	2672321	.	-	.	ID=rna54;Parent=gene2830;Dbxref=GeneID:3796617;codons=28;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	exon	2672245	2672321	.	-	.	ID=id474;Parent=rna54;Dbxref=GeneID:3796617;codons=28;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	gene	2672325	2672417	.	-	.	ID=gene2831;Dbxref=GeneID:3796618;Name=SDY_2891;Note=SDY2891;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_2891
NC_007606.1	RefSeq	tRNA	2672325	2672417	.	-	.	ID=rna55;Parent=gene2831;Dbxref=GeneID:3796618;codons=45;gbkey=tRNA;product=tRNA-Ser
NC_007606.1	RefSeq	exon	2672325	2672417	.	-	.	ID=id475;Parent=rna55;Dbxref=GeneID:3796618;codons=45;gbkey=tRNA;product=tRNA-Ser
NC_007606.1	RefSeq	gene	2672733	2672918	.	-	.	ID=gene2832;Dbxref=GeneID:3796619;Name=csrA;Note=SDY2892;gbkey=Gene;gene=csrA;gene_biotype=protein_coding;locus_tag=SDY_2892
NC_007606.1	RefSeq	CDS	2672733	2672918	.	-	0	ID=cds2504;Parent=gene2832;Dbxref=Genbank:YP_404414.1,GeneID:3796619;Name=YP_404414.1;Note=affects carbohydrate metabolism%3B has regulatory role in many processes;gbkey=CDS;gene=csrA;product=carbon storage regulator;protein_id=YP_404414.1;transl_table=11
NC_007606.1	RefSeq	gene	2673153	2675783	.	-	.	ID=gene2833;Dbxref=GeneID:3796620;Name=alaS;Note=SDY2893;gbkey=Gene;gene=alaS;gene_biotype=protein_coding;locus_tag=SDY_2893
NC_007606.1	RefSeq	CDS	2673153	2675783	.	-	0	ID=cds2505;Parent=gene2833;Dbxref=Genbank:YP_404415.1,GeneID:3796620;Name=YP_404415.1;Note=''Catalyzes a two-step reaction%2C first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA'';gbkey=CDS;gene=alaS;product=alanyl-tRNA synthetase;protein_id=YP_404415.1;transl_table=11
NC_007606.1	RefSeq	gene	2675911	2676411	.	-	.	ID=gene2834;Dbxref=GeneID:3796621;Name=recX;Note=SDY2894;gbkey=Gene;gene=recX;gene_biotype=protein_coding;locus_tag=SDY_2894
NC_007606.1	RefSeq	CDS	2675911	2676411	.	-	0	ID=cds2506;Parent=gene2834;Dbxref=Genbank:YP_404416.1,GeneID:3796621;Name=YP_404416.1;Note=binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities;gbkey=CDS;gene=recX;product=recombination regulator RecX;protein_id=YP_404416.1;transl_table=11
NC_007606.1	RefSeq	gene	2676654	2677715	.	-	.	ID=gene2835;Dbxref=GeneID:3796622;Name=recA;Note=SDY2895;gbkey=Gene;gene=recA;gene_biotype=protein_coding;locus_tag=SDY_2895
NC_007606.1	RefSeq	CDS	2676654	2677715	.	-	0	ID=cds2507;Parent=gene2835;Dbxref=Genbank:YP_404417.1,GeneID:3796622;Name=YP_404417.1;Note=''catalyzes the hydrolysis of ATP in the presence of single-stranded DNA%2C the ATP-dependent uptake of single-stranded DNA by duplex DNA%2C and the ATP-dependent hybridization of homologous single-stranded DNAs'';gbkey=CDS;gene=recA;product=recombinase A;protein_id=YP_404417.1;transl_table=11
NC_007606.1	RefSeq	gene	2677795	2678292	.	-	.	ID=gene2836;Dbxref=GeneID:3796623;Name=ygaD;Note=SDY2896;gbkey=Gene;gene=ygaD;gene_biotype=protein_coding;locus_tag=SDY_2896
NC_007606.1	RefSeq	CDS	2677795	2678292	.	-	0	ID=cds2508;Parent=gene2836;Dbxref=Genbank:YP_404418.1,GeneID:3796623;Name=YP_404418.1;Note=Code: R%3B COG: COG1546;gbkey=CDS;gene=ygaD;product=competence damage-inducible protein A;protein_id=YP_404418.1;transl_table=11
NC_007606.1	RefSeq	gene	2678438	2679523	.	-	.	ID=gene2837;Dbxref=GeneID:3796624;Name=mltB;Note=SDY2897;gbkey=Gene;gene=mltB;gene_biotype=protein_coding;locus_tag=SDY_2897
NC_007606.1	RefSeq	CDS	2678438	2679523	.	-	0	ID=cds2509;Parent=gene2837;Dbxref=Genbank:YP_404419.1,GeneID:3796624;Name=YP_404419.1;Note=membrane-bound lytic murein transglycosylase B%3B catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan;gbkey=CDS;gene=mltB;product=murein hydrolase B;protein_id=YP_404419.1;transl_table=11
NC_007606.1	RefSeq	gene	2679779	2680342	.	+	.	ID=gene2838;Dbxref=GeneID:3796625;Name=srlA;Note=SDY2898;gbkey=Gene;gene=srlA;gene_biotype=protein_coding;locus_tag=SDY_2898
NC_007606.1	RefSeq	CDS	2679779	2680342	.	+	0	ID=cds2510;Parent=gene2838;Dbxref=Genbank:YP_404420.1,GeneID:3796625;Name=YP_404420.1;Note=Code: G%3B COG: COG3730;gbkey=CDS;gene=srlA;product=PTS system glucitol/sorbitol-specific transporter subunit IIC;protein_id=YP_404420.1;transl_table=11
NC_007606.1	RefSeq	gene	2680339	2681103	.	+	.	ID=gene2839;Dbxref=GeneID:3796626;Name=srlE;Note=''SDY2899%3B contains iso-IS1 insertion%3B original product: PTS system%2C glucitol/sorbitol-specific IIB component and second of two IIC components'';gbkey=Gene;gene=srlE;gene_biotype=pseudogene;locus_tag=SDY_2899;pseudo=true
NC_007606.1	RefSeq	region	2681098	2681864	.	-	.	ID=id476;gbkey=mobile_element;gene=srlE
NC_007606.1	RefSeq	gene	2681535	2681807	.	-	.	ID=gene2840;Dbxref=GeneID:18263122;Name=SDY_4733;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4733
NC_007606.1	RefSeq	CDS	2681535	2681807	.	-	0	ID=cds2511;Parent=gene2840;Dbxref=Genbank:YP_009000808.1,GeneID:18263122;Name=YP_009000808.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000808.1;transl_table=11
NC_007606.1	RefSeq	gene	2682083	2682454	.	+	.	ID=gene2841;Dbxref=GeneID:3796628;Name=srlB;Note=SDY2901;gbkey=Gene;gene=srlB;gene_biotype=protein_coding;locus_tag=SDY_2901
NC_007606.1	RefSeq	CDS	2682083	2682454	.	+	0	ID=cds2512;Parent=gene2841;Dbxref=Genbank:YP_404422.1,GeneID:3796628;Name=YP_404422.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;gene=srlB;product=PTS system glucitol/sorbitol-specific transporter subunit IIA;protein_id=YP_404422.1;transl_table=11
NC_007606.1	RefSeq	gene	2682458	2683237	.	+	.	ID=gene2842;Dbxref=GeneID:3796629;Name=srlD;Note=SDY2902;gbkey=Gene;gene=srlD;gene_biotype=protein_coding;locus_tag=SDY_2902
NC_007606.1	RefSeq	CDS	2682458	2683237	.	+	0	ID=cds2513;Parent=gene2842;Dbxref=Genbank:YP_404423.1,GeneID:3796629;Name=YP_404423.1;Note=catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate;gbkey=CDS;gene=srlD;product=sorbitol-6-phosphate dehydrogenase;protein_id=YP_404423.1;transl_table=11
NC_007606.1	RefSeq	gene	2683343	2683702	.	+	.	ID=gene2843;Dbxref=GeneID:3796630;Name=gutM;Note=SDY2903;gbkey=Gene;gene=gutM;gene_biotype=protein_coding;locus_tag=SDY_2903
NC_007606.1	RefSeq	CDS	2683343	2683702	.	+	0	ID=cds2514;Parent=gene2843;Dbxref=Genbank:YP_404424.1,GeneID:3796630;Name=YP_404424.1;Note=regulator for glucitol utilization;gbkey=CDS;gene=gutM;product=DNA-binding transcriptional activator GutM;protein_id=YP_404424.1;transl_table=11
NC_007606.1	RefSeq	gene	2683769	2684542	.	+	.	ID=gene2844;Dbxref=GeneID:3796631;Name=srlR;Note=SDY2904;gbkey=Gene;gene=srlR;gene_biotype=protein_coding;locus_tag=SDY_2904
NC_007606.1	RefSeq	CDS	2683769	2684542	.	+	0	ID=cds2515;Parent=gene2844;Dbxref=Genbank:YP_404425.1,GeneID:3796631;Name=YP_404425.1;Note=regulates genes involved in glucitol utilization;gbkey=CDS;gene=srlR;product=DNA-binding transcriptional repressor SrlR;protein_id=YP_404425.1;transl_table=11
NC_007606.1	RefSeq	gene	2684535	2685500	.	+	.	ID=gene2845;Dbxref=GeneID:3796632;Name=gutQ;Note=SDY2905;gbkey=Gene;gene=gutQ;gene_biotype=protein_coding;locus_tag=SDY_2905
NC_007606.1	RefSeq	CDS	2684535	2685500	.	+	0	ID=cds2516;Parent=gene2845;Dbxref=Genbank:YP_404426.2,GeneID:3796632;Name=YP_404426.2;Note=catalyzes the conversion of D-arabinose 5-phosphate to D-ribulose-5-phosphate;gbkey=CDS;gene=gutQ;product=D-arabinose 5-phosphate isomerase;protein_id=YP_404426.2;transl_table=11
NC_007606.1	RefSeq	gene	2685497	2687011	.	-	.	ID=gene2846;Dbxref=GeneID:3796633;Name=ygaA;Note=SDY2906;gbkey=Gene;gene=ygaA;gene_biotype=protein_coding;locus_tag=SDY_2906
NC_007606.1	RefSeq	CDS	2685497	2687011	.	-	0	ID=cds2517;Parent=gene2846;Dbxref=Genbank:YP_404427.2,GeneID:3796633;Name=YP_404427.2;Note=Required for the expression of anaerobic nitric oxide (NO) reductase%3B acts as a transcriptional activator for the norVW operon;gbkey=CDS;gene=ygaA;product=anaerobic nitric oxide reductase transcriptional regulator;protein_id=YP_404427.2;transl_table=11
NC_007606.1	RefSeq	gene	2687198	2688637	.	+	.	ID=gene2847;Dbxref=GeneID:3796383;Name=SDY_2907;Note=SDY2907;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2907
NC_007606.1	RefSeq	CDS	2687198	2688637	.	+	0	ID=cds2518;Parent=gene2847;Dbxref=Genbank:YP_404428.1,GeneID:3796383;Name=YP_404428.1;Note=detoxifies nitric oxide using NADH;gbkey=CDS;product=anaerobic nitric oxide reductase flavorubredoxin;protein_id=YP_404428.1;transl_table=11
NC_007606.1	RefSeq	gene	2688634	2689767	.	+	.	ID=gene2848;Dbxref=GeneID:3796384;Name=ygbD;Note=SDY2908;gbkey=Gene;gene=ygbD;gene_biotype=protein_coding;locus_tag=SDY_2908
NC_007606.1	RefSeq	CDS	2688634	2689767	.	+	0	ID=cds2519;Parent=gene2848;Dbxref=Genbank:YP_404429.1,GeneID:3796384;Name=YP_404429.1;Note=catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase;gbkey=CDS;gene=ygbD;product=nitric oxide reductase;protein_id=YP_404429.1;transl_table=11
NC_007606.1	RefSeq	gene	2689899	2692151	.	-	.	ID=gene2849;Dbxref=GeneID:3796385;Name=hypF;Note=SDY2909;gbkey=Gene;gene=hypF;gene_biotype=protein_coding;locus_tag=SDY_2909
NC_007606.1	RefSeq	CDS	2689899	2692151	.	-	0	ID=cds2520;Parent=gene2849;Dbxref=Genbank:YP_404430.1,GeneID:3796385;Name=YP_404430.1;Note=Code: O%3B COG: COG0068;gbkey=CDS;gene=hypF;product=transcriptional regulator;protein_id=YP_404430.1;transl_table=11
NC_007606.1	RefSeq	gene	2692304	2692708	.	-	.	ID=gene2850;Dbxref=GeneID:3796386;Name=hydN;Note=''SDY2910%3B truncated%3B original product: involved in electron transport from formate to hydrogen%2C Fe-S centers'';gbkey=Gene;gene=hydN;gene_biotype=pseudogene;locus_tag=SDY_2910;pseudo=true
NC_007606.1	RefSeq	gene	2692712	2693725	.	-	.	ID=gene2851;Dbxref=GeneID:3796387;Name=ascG;Note=SDY2911;gbkey=Gene;gene=ascG;gene_biotype=protein_coding;locus_tag=SDY_2911
NC_007606.1	RefSeq	CDS	2692712	2693725	.	-	0	ID=cds2521;Parent=gene2851;Dbxref=Genbank:YP_404431.1,GeneID:3796387;Name=YP_404431.1;Note=Code: K%3B COG: COG1609;gbkey=CDS;gene=ascG;product=ascBF operon repressor;protein_id=YP_404431.1;transl_table=11
NC_007606.1	RefSeq	gene	2694840	2696264	.	+	.	ID=gene2852;Dbxref=GeneID:3796388;Name=ascB;Note=SDY2912;gbkey=Gene;gene=ascB;gene_biotype=protein_coding;locus_tag=SDY_2912
NC_007606.1	RefSeq	CDS	2694840	2696264	.	+	0	ID=cds2522;Parent=gene2852;Dbxref=Genbank:YP_404432.1,GeneID:3796388;Name=YP_404432.1;Note=Code: G%3B COG: COG2723;gbkey=CDS;gene=ascB;product=cryptic 6-phospho-beta-glucosidase;protein_id=YP_404432.1;transl_table=11
NC_007606.1	RefSeq	gene	2696379	2696864	.	-	.	ID=gene2853;Dbxref=GeneID:3796389;Name=SDY_2913;Note=SDY2913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2913
NC_007606.1	RefSeq	CDS	2696379	2696864	.	-	0	ID=cds2523;Parent=gene2853;Dbxref=Genbank:YP_404433.1,GeneID:3796389;Name=YP_404433.1;Note=Code: K%3B COG: COG5499;gbkey=CDS;product=hypothetical protein;protein_id=YP_404433.1;transl_table=11
NC_007606.1	RefSeq	gene	2697034	2697501	.	-	.	ID=gene2854;Dbxref=GeneID:3796390;Name=hycI;Note=SDY2914;gbkey=Gene;gene=hycI;gene_biotype=protein_coding;locus_tag=SDY_2914
NC_007606.1	RefSeq	CDS	2697034	2697501	.	-	0	ID=cds2524;Parent=gene2854;Dbxref=Genbank:YP_404434.1,GeneID:3796390;Name=YP_404434.1;Note=involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE;gbkey=CDS;gene=hycI;product=hydrogenase 3 maturation protease;protein_id=YP_404434.1;transl_table=11
NC_007606.1	RefSeq	gene	2697494	2697904	.	-	.	ID=gene2855;Dbxref=GeneID:3796391;Name=hycH;Note=SDY2915;gbkey=Gene;gene=hycH;gene_biotype=protein_coding;locus_tag=SDY_2915
NC_007606.1	RefSeq	CDS	2697494	2697904	.	-	0	ID=cds2525;Parent=gene2855;Dbxref=Genbank:YP_404435.1,GeneID:3796391;Name=YP_404435.1;gbkey=CDS;gene=hycH;product=formate hydrogenlyase maturation protein HycH;protein_id=YP_404435.1;transl_table=11
NC_007606.1	RefSeq	gene	2697901	2698667	.	-	.	ID=gene2856;Dbxref=GeneID:3796392;Name=hycG;Note=SDY2916%3B frameshift%3B original product: hydrogenase activity;gbkey=Gene;gene=hycG;gene_biotype=pseudogene;locus_tag=SDY_2916;pseudo=true
NC_007606.1	RefSeq	gene	2698667	2699209	.	-	.	ID=gene2857;Dbxref=GeneID:3796393;Name=hycF;Note=SDY2917;gbkey=Gene;gene=hycF;gene_biotype=protein_coding;locus_tag=SDY_2917
NC_007606.1	RefSeq	CDS	2698667	2699209	.	-	0	ID=cds2526;Parent=gene2857;Dbxref=Genbank:YP_404436.1,GeneID:3796393;Name=YP_404436.1;Note=''electron transfer protein for hydrogenase-3%3B the formate hydrogenlyase complex comprises of a formate dehydrogenase%2C unidentified electron carriers and hydrogenase-3%3B in this non-energy conserving pathway%2C molecular hydrogen and carbodioxide are released from formate'';gbkey=CDS;gene=hycF;product=formate hydrogenlyase complex iron-sulfur subunit;protein_id=YP_404436.1;transl_table=11
NC_007606.1	RefSeq	gene	2699219	2700928	.	-	.	ID=gene2858;Dbxref=GeneID:3796394;Name=hycE;Note=SDY2918;gbkey=Gene;gene=hycE;gene_biotype=protein_coding;locus_tag=SDY_2918
NC_007606.1	RefSeq	CDS	2699219	2700928	.	-	0	ID=cds2527;Parent=gene2858;Dbxref=Genbank:YP_404437.1,GeneID:3796394;Name=YP_404437.1;Note=Code: C%3B COG: COG3261;gbkey=CDS;gene=hycE;product=hydrogenase 3 large subunit;protein_id=YP_404437.1;transl_table=11
NC_007606.1	RefSeq	gene	2700946	2701869	.	-	.	ID=gene2859;Dbxref=GeneID:3796395;Name=hycD;Note=SDY2919;gbkey=Gene;gene=hycD;gene_biotype=pseudogene;locus_tag=SDY_2919;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2701872	2703740	.	-	.	ID=gene2860;Dbxref=GeneID:3796396;Name=hycC;Note=SDY2920%3B contains in-frame stop codon%3B original product: membrane-spanning protein of hydrogenase 3 (part of FHL complex);gbkey=Gene;gene=hycC;gene_biotype=pseudogene;locus_tag=SDY_2920;pseudo=true
NC_007606.1	RefSeq	gene	2703737	2704348	.	-	.	ID=gene2861;Dbxref=GeneID:3796397;Name=hycB;Note=SDY2921;gbkey=Gene;gene=hycB;gene_biotype=protein_coding;locus_tag=SDY_2921
NC_007606.1	RefSeq	CDS	2703737	2704348	.	-	0	ID=cds2528;Parent=gene2861;Dbxref=Genbank:YP_404439.1,GeneID:3796397;Name=YP_404439.1;Note=Code: C%3B COG: COG1142;gbkey=CDS;gene=hycB;product=hydrogenase-3 iron-sulfur small subunit;protein_id=YP_404439.1;transl_table=11
NC_007606.1	RefSeq	gene	2704473	2704934	.	-	.	ID=gene2862;Dbxref=GeneID:3796398;Name=hycA;Note=SDY2922;gbkey=Gene;gene=hycA;gene_biotype=protein_coding;locus_tag=SDY_2922
NC_007606.1	RefSeq	CDS	2704473	2704934	.	-	0	ID=cds2529;Parent=gene2862;Dbxref=Genbank:YP_404440.1,GeneID:3796398;Name=YP_404440.1;Note=regulates several genes involved in the formate hydrogenlyase system%3B seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon;gbkey=CDS;gene=hycA;product=formate hydrogenlyase regulatory protein HycA;protein_id=YP_404440.1;transl_table=11
NC_007606.1	RefSeq	gene	2705146	2705496	.	+	.	ID=gene2863;Dbxref=GeneID:3796399;Name=hypA;Note=SDY2923;gbkey=Gene;gene=hypA;gene_biotype=protein_coding;locus_tag=SDY_2923
NC_007606.1	RefSeq	CDS	2705146	2705496	.	+	0	ID=cds2530;Parent=gene2863;Dbxref=Genbank:YP_404441.1,GeneID:3796399;Name=YP_404441.1;Note=plays a role in hydrogenase nickel cofactor insertion;gbkey=CDS;gene=hypA;product=hydrogenase nickel incorporation protein;protein_id=YP_404441.1;transl_table=11
NC_007606.1	RefSeq	gene	2705500	2706372	.	+	.	ID=gene2864;Dbxref=GeneID:3796400;Name=hypB;Note=SDY2924;gbkey=Gene;gene=hypB;gene_biotype=protein_coding;locus_tag=SDY_2924
NC_007606.1	RefSeq	CDS	2705500	2706372	.	+	0	ID=cds2531;Parent=gene2864;Dbxref=Genbank:YP_404442.1,GeneID:3796400;Name=YP_404442.1;Note=GTP hydrolase involved in nickel liganding into hydrogenases;gbkey=CDS;gene=hypB;product=hydrogenase nickel incorporation protein HypB;protein_id=YP_404442.1;transl_table=11
NC_007606.1	RefSeq	gene	2706363	2706635	.	+	.	ID=gene2865;Dbxref=GeneID:3796401;Name=hypC;Note=SDY2925;gbkey=Gene;gene=hypC;gene_biotype=protein_coding;locus_tag=SDY_2925
NC_007606.1	RefSeq	CDS	2706363	2706635	.	+	0	ID=cds2532;Parent=gene2865;Dbxref=Genbank:YP_404443.1,GeneID:3796401;Name=YP_404443.1;Note=''HypC%3B accessory protein necessary for maturation of the hydrogenase isoforms 1%2C 2 and 3%3B forms a complex with HypD%2C HypE%2C and HypF proteins%2C which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase'';gbkey=CDS;gene=hypC;product=hydrogenase assembly chaperone;protein_id=YP_404443.1;transl_table=11
NC_007606.1	RefSeq	gene	2706635	2707756	.	+	.	ID=gene2866;Dbxref=GeneID:3796402;Name=hypD;Note=SDY2926;gbkey=Gene;gene=hypD;gene_biotype=protein_coding;locus_tag=SDY_2926
NC_007606.1	RefSeq	CDS	2706635	2707756	.	+	0	ID=cds2533;Parent=gene2866;Dbxref=Genbank:YP_404444.1,GeneID:3796402;Name=YP_404444.1;Note=Code: O%3B COG: COG0409;gbkey=CDS;gene=hypD;product=hydrogenase expression/formation protein HypD;protein_id=YP_404444.1;transl_table=11
NC_007606.1	RefSeq	gene	2707795	2708763	.	+	.	ID=gene2867;Dbxref=GeneID:3796501;Name=hypE;Note=SDY2927;gbkey=Gene;gene=hypE;gene_biotype=protein_coding;locus_tag=SDY_2927
NC_007606.1	RefSeq	CDS	2707795	2708763	.	+	0	ID=cds2534;Parent=gene2867;Dbxref=Genbank:YP_404445.1,GeneID:3796501;Name=YP_404445.1;Note=Code: O%3B COG: COG0309;gbkey=CDS;gene=hypE;product=hypothetical protein;protein_id=YP_404445.1;transl_table=11
NC_007606.1	RefSeq	gene	2708837	2710617	.	+	.	ID=gene2868;Dbxref=GeneID:3796502;Name=fhlA;Note=''SDY2928%3B contains IS600 insertion%3B original product: formate hydrogen-lyase transcriptional activator for fdhF%2C hyc and hyp operons'';gbkey=Gene;gene=fhlA;gene_biotype=pseudogene;locus_tag=SDY_2928;pseudo=true
NC_007606.1	RefSeq	region	2710599	2711862	.	-	.	ID=id477;gbkey=mobile_element;gene=fhlA
NC_007606.1	RefSeq	gene	2710642	2711355	.	-	.	ID=gene2869;Dbxref=GeneID:3796503;Name=SDY_2929;Note=SDY2929;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2929
NC_007606.1	RefSeq	CDS	2710642	2711355	.	-	0	ID=cds2535;Parent=gene2869;Dbxref=Genbank:YP_404446.1,GeneID:3796503;Name=YP_404446.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_404446.1;transl_table=11
NC_007606.1	RefSeq	gene	2711496	2711798	.	-	.	ID=gene2870;Dbxref=GeneID:3796504;Name=SDY_2930;Note=SDY2930;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2930
NC_007606.1	RefSeq	CDS	2711496	2711798	.	-	0	ID=cds2536;Parent=gene2870;Dbxref=Genbank:YP_404447.1,GeneID:3796504;Name=YP_404447.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_404447.1;transl_table=11
NC_007606.1	RefSeq	gene	2712202	2712645	.	+	.	ID=gene2871;Dbxref=GeneID:3796505;Name=SDY_2931;Note=SDY2931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2931
NC_007606.1	RefSeq	CDS	2712202	2712645	.	+	0	ID=cds2537;Parent=gene2871;Dbxref=Genbank:YP_404448.1,GeneID:3796505;Name=YP_404448.1;Note=Code: R%3B COG: COG2005;gbkey=CDS;product=molybdenum-pterin-binding-protein;protein_id=YP_404448.1;transl_table=11
NC_007606.1	RefSeq	gene	2712684	2713028	.	-	.	ID=gene2872;Dbxref=GeneID:3796506;Name=ygbA;Note=SDY2932;gbkey=Gene;gene=ygbA;gene_biotype=protein_coding;locus_tag=SDY_2932
NC_007606.1	RefSeq	CDS	2712684	2713028	.	-	0	ID=cds2538;Parent=gene2872;Dbxref=Genbank:YP_404449.1,GeneID:3796506;Name=YP_404449.1;gbkey=CDS;gene=ygbA;product=hypothetical protein;protein_id=YP_404449.1;transl_table=11
NC_007606.1	RefSeq	gene	2713315	2715876	.	+	.	ID=gene2873;Dbxref=GeneID:3796507;Name=mutS;Note=SDY2933;gbkey=Gene;gene=mutS;gene_biotype=protein_coding;locus_tag=SDY_2933
NC_007606.1	RefSeq	CDS	2713315	2715876	.	+	0	ID=cds2539;Parent=gene2873;Dbxref=Genbank:YP_404450.1,GeneID:3796507;Name=YP_404450.1;Note=This protein performs the mismatch recognition step during the DNA repair process;gbkey=CDS;gene=mutS;product=DNA mismatch repair protein MutS;protein_id=YP_404450.1;transl_table=11
NC_007606.1	RefSeq	region	2715925	2716692	.	-	.	ID=id478;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2715940	2716317	.	-	.	ID=gene2874;Dbxref=GeneID:3796508;Name=insB;Note=SDY2934;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2934
NC_007606.1	RefSeq	CDS	2715940	2716317	.	-	0	ID=cds2540;Parent=gene2874;Dbxref=Genbank:YP_404451.1,GeneID:3796508;Name=YP_404451.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404451.1;transl_table=11
NC_007606.1	RefSeq	gene	2716362	2716637	.	-	.	ID=gene2875;Dbxref=GeneID:3796509;Name=insA;Note=SDY2935;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2935
NC_007606.1	RefSeq	CDS	2716362	2716637	.	-	0	ID=cds2541;Parent=gene2875;Dbxref=Genbank:YP_404452.1,GeneID:3796509;Name=YP_404452.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404452.1;transl_table=11
NC_007606.1	RefSeq	gene	2716734	2716970	.	-	.	ID=gene2876;Dbxref=GeneID:3796510;Name=SDY_2936;Note=SDY2936;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2936
NC_007606.1	RefSeq	CDS	2716734	2716970	.	-	0	ID=cds2542;Parent=gene2876;Dbxref=Genbank:YP_404453.1,GeneID:3796510;Name=YP_404453.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404453.1;transl_table=11
NC_007606.1	RefSeq	gene	2716981	2718407	.	-	.	ID=gene2877;Dbxref=GeneID:3796511;Name=SDY_2937;Note=SDY2937;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2937;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2718407	2719000	.	-	.	ID=gene2878;Dbxref=GeneID:3796512;Name=SDY_2938;Note=SDY2938;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2938;pseudogene=unknown
NC_007606.1	RefSeq	CDS	2718407	2719000	.	-	0	ID=cds2543;Parent=gene2878;Dbxref=Genbank:YP_404455.1,GeneID:3796512;Name=YP_404455.1;Note=Code: H%3B COG: COG0163;gbkey=CDS;product=phenylacrylic acid decarboxylase-like protein;protein_id=YP_404455.1;transl_table=11
NC_007606.1	RefSeq	gene	2719147	2719554	.	+	.	ID=gene2879;Dbxref=GeneID:3796513;Name=SDY_2939;Note=SDY2939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2939
NC_007606.1	RefSeq	CDS	2719147	2719554	.	+	0	ID=cds2544;Parent=gene2879;Dbxref=Genbank:YP_404456.1,GeneID:3796513;Name=YP_404456.1;Note=Code: K%3B COG: COG1846;gbkey=CDS;product=transcriptional regulator;protein_id=YP_404456.1;transl_table=11
NC_007606.1	RefSeq	gene	2719674	2720666	.	-	.	ID=gene2880;Dbxref=GeneID:3796514;Name=rpoS;Note=SDY2940;gbkey=Gene;gene=rpoS;gene_biotype=protein_coding;locus_tag=SDY_2940
NC_007606.1	RefSeq	CDS	2719674	2720666	.	-	0	ID=cds2545;Parent=gene2880;Dbxref=Genbank:YP_404457.1,GeneID:3796514;Name=YP_404457.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this sigma factor controls a regulon of genes required for protection against external stresses;gbkey=CDS;gene=rpoS;product=RNA polymerase sigma factor RpoS;protein_id=YP_404457.1;transl_table=11
NC_007606.1	RefSeq	gene	2720729	2721868	.	-	.	ID=gene2881;Dbxref=GeneID:3796515;Name=nlpD;Note=SDY2941;gbkey=Gene;gene=nlpD;gene_biotype=protein_coding;locus_tag=SDY_2941
NC_007606.1	RefSeq	CDS	2720729	2721868	.	-	0	ID=cds2546;Parent=gene2881;Dbxref=Genbank:YP_404458.1,GeneID:3796515;Name=YP_404458.1;Note=outer membrane lipoprotein involved in stationary-phase cell survival%3B similar to LppB virulence determinant from Haemophilus somnus;gbkey=CDS;gene=nlpD;product=lipoprotein NlpD;protein_id=YP_404458.1;transl_table=11
NC_007606.1	RefSeq	gene	2722008	2722634	.	-	.	ID=gene2882;Dbxref=GeneID:3796516;Name=pcm;Note=SDY2942;gbkey=Gene;gene=pcm;gene_biotype=protein_coding;locus_tag=SDY_2942
NC_007606.1	RefSeq	CDS	2722008	2722634	.	-	0	ID=cds2547;Parent=gene2882;Dbxref=Genbank:YP_404459.1,GeneID:3796516;Name=YP_404459.1;Note=catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins;gbkey=CDS;gene=pcm;product=protein-L-isoaspartate O-methyltransferase;protein_id=YP_404459.1;transl_table=11
NC_007606.1	RefSeq	gene	2722628	2723389	.	-	.	ID=gene2883;Dbxref=GeneID:3796517;Name=surE;Note=SDY2943;gbkey=Gene;gene=surE;gene_biotype=protein_coding;locus_tag=SDY_2943
NC_007606.1	RefSeq	CDS	2722628	2723389	.	-	0	ID=cds2548;Parent=gene2883;Dbxref=Genbank:YP_404460.1,GeneID:3796517;Name=YP_404460.1;Note=catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate;gbkey=CDS;gene=surE;product=stationary phase survival protein SurE;protein_id=YP_404460.1;transl_table=11
NC_007606.1	RefSeq	gene	2723370	2724419	.	-	.	ID=gene2884;Dbxref=GeneID:3796518;Name=truD;Note=SDY2944;gbkey=Gene;gene=truD;gene_biotype=protein_coding;gene_synonym=ygbO;locus_tag=SDY_2944
NC_007606.1	RefSeq	CDS	2723370	2724419	.	-	0	ID=cds2549;Parent=gene2884;Dbxref=Genbank:YP_404461.1,GeneID:3796518;Name=YP_404461.1;Note=catalyzes the modification of U13 in tRNA(Glu);gbkey=CDS;gene=truD;product=tRNA pseudouridine synthase D;protein_id=YP_404461.1;transl_table=11
NC_007606.1	RefSeq	gene	2724416	2724895	.	-	.	ID=gene2885;Dbxref=GeneID:3796519;Name=ispF;Note=SDY2945;gbkey=Gene;gene=ispF;gene_biotype=protein_coding;locus_tag=SDY_2945
NC_007606.1	RefSeq	CDS	2724416	2724895	.	-	0	ID=cds2550;Parent=gene2885;Dbxref=Genbank:YP_404462.1,GeneID:3796519;Name=YP_404462.1;Note=''catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate'';gbkey=CDS;gene=ispF;product=2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase;protein_id=YP_404462.1;transl_table=11
NC_007606.1	RefSeq	gene	2724895	2725605	.	-	.	ID=gene2886;Dbxref=GeneID:3796403;Name=ispD;Note=SDY2946;gbkey=Gene;gene=ispD;gene_biotype=protein_coding;locus_tag=SDY_2946
NC_007606.1	RefSeq	CDS	2724895	2725605	.	-	0	ID=cds2551;Parent=gene2886;Dbxref=Genbank:YP_404463.1,GeneID:3796403;Name=YP_404463.1;Note=4-diphosphocytidyl-2C-methyl-D-erythritol synthase%3B MEP cytidylyltransferase%3B MCT%3B catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate%3B involved in isoprenoid and isopentenyl-PP biosynthesis%3B forms homodimers;gbkey=CDS;gene=ispD;product=2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;protein_id=YP_404463.1;transl_table=11
NC_007606.1	RefSeq	gene	2725624	2725935	.	-	.	ID=gene2887;Dbxref=GeneID:3796404;Name=ftsB;Note=SDY2947;gbkey=Gene;gene=ftsB;gene_biotype=protein_coding;locus_tag=SDY_2947
NC_007606.1	RefSeq	CDS	2725624	2725935	.	-	0	ID=cds2552;Parent=gene2887;Dbxref=Genbank:YP_404464.1,GeneID:3796404;Name=YP_404464.1;Note=forms a complex with FtsL and FtsQ%3B colocalizes to the septal region of the dividing cell%3B membrane protein;gbkey=CDS;gene=ftsB;product=cell division protein FtsB;protein_id=YP_404464.1;transl_table=11
NC_007606.1	RefSeq	gene	2726129	2726452	.	-	.	ID=gene2888;Dbxref=GeneID:3796405;Name=ygbE;Note=SDY2948;gbkey=Gene;gene=ygbE;gene_biotype=protein_coding;locus_tag=SDY_2948
NC_007606.1	RefSeq	CDS	2726129	2726452	.	-	0	ID=cds2553;Parent=gene2888;Dbxref=Genbank:YP_404465.1,GeneID:3796405;Name=YP_404465.1;gbkey=CDS;gene=ygbE;product=hypothetical protein;protein_id=YP_404465.1;transl_table=11
NC_007606.1	RefSeq	gene	2726502	2727107	.	-	.	ID=gene2889;Dbxref=GeneID:3796406;Name=cysC;Note=SDY2949;gbkey=Gene;gene=cysC;gene_biotype=protein_coding;locus_tag=SDY_2949
NC_007606.1	RefSeq	CDS	2726502	2727107	.	-	0	ID=cds2554;Parent=gene2889;Dbxref=Genbank:YP_404466.1,GeneID:3796406;Name=YP_404466.1;Note=converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis;gbkey=CDS;gene=cysC;product=adenylylsulfate kinase;protein_id=YP_404466.1;transl_table=11
NC_007606.1	RefSeq	gene	2727107	2728534	.	-	.	ID=gene2890;Dbxref=GeneID:3796407;Name=cysN;Note=SDY2950;gbkey=Gene;gene=cysN;gene_biotype=protein_coding;locus_tag=SDY_2950
NC_007606.1	RefSeq	CDS	2727107	2728534	.	-	0	ID=cds2555;Parent=gene2890;Dbxref=Genbank:YP_404467.1,GeneID:3796407;Name=YP_404467.1;Note=may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate%3B in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step%3B forms a heterodimer with CysD%3B part of the GTP-binding elongation factor family CysN/NodQ;gbkey=CDS;gene=cysN;product=sulfate adenylyltransferase subunit 1;protein_id=YP_404467.1;transl_table=11
NC_007606.1	RefSeq	gene	2728536	2729444	.	-	.	ID=gene2891;Dbxref=GeneID:3796408;Name=cysD;Note=SDY2951;gbkey=Gene;gene=cysD;gene_biotype=protein_coding;locus_tag=SDY_2951
NC_007606.1	RefSeq	CDS	2728536	2729444	.	-	0	ID=cds2556;Parent=gene2891;Dbxref=Genbank:YP_404468.1,GeneID:3796408;Name=YP_404468.1;Note=with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP;gbkey=CDS;gene=cysD;product=sulfate adenylyltransferase subunit 2;protein_id=YP_404468.1;transl_table=11
NC_007606.1	RefSeq	gene	2729697	2730734	.	+	.	ID=gene2892;Dbxref=GeneID:3796409;Name=iap;Note=SDY2952;gbkey=Gene;gene=iap;gene_biotype=protein_coding;locus_tag=SDY_2952
NC_007606.1	RefSeq	CDS	2729697	2730734	.	+	0	ID=cds2557;Parent=gene2892;Dbxref=Genbank:YP_404469.1,GeneID:3796409;Name=YP_404469.1;Note=catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3;gbkey=CDS;gene=iap;product=alkaline phosphatase;protein_id=YP_404469.1;transl_table=11
NC_007606.1	RefSeq	gene	2731133	2731417	.	-	.	ID=gene2893;Dbxref=GeneID:3796410;Name=ygbF;Note=SDY2953;gbkey=Gene;gene=ygbF;gene_biotype=protein_coding;locus_tag=SDY_2953
NC_007606.1	RefSeq	CDS	2731133	2731417	.	-	0	ID=cds2558;Parent=gene2893;Dbxref=Genbank:YP_404470.2,GeneID:3796410;Name=YP_404470.2;gbkey=CDS;gene=ygbF;product=hypothetical protein;protein_id=YP_404470.2;transl_table=11
NC_007606.1	RefSeq	gene	2731419	2732336	.	-	.	ID=gene2894;Dbxref=GeneID:3796411;Name=SDY_2954;Note=SDY2954;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2954;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2732352	2732951	.	-	.	ID=gene2895;Dbxref=GeneID:3796412;Name=SDY_2955;Note=SDY2955;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2955
NC_007606.1	RefSeq	CDS	2732352	2732951	.	-	0	ID=cds2559;Parent=gene2895;Dbxref=Genbank:YP_404472.1,GeneID:3796412;Name=YP_404472.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404472.1;transl_table=11
NC_007606.1	RefSeq	region	2733274	2734041	.	+	.	ID=id479;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2733329	2733604	.	+	.	ID=gene2896;Dbxref=GeneID:3796413;Name=insA;Note=SDY2956;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2956
NC_007606.1	RefSeq	CDS	2733329	2733604	.	+	0	ID=cds2560;Parent=gene2896;Dbxref=Genbank:YP_404473.1,GeneID:3796413;Name=YP_404473.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404473.1;transl_table=11
NC_007606.1	RefSeq	gene	2733649	2734026	.	+	.	ID=gene2897;Dbxref=GeneID:3796414;Name=insB;Note=SDY2957;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2957
NC_007606.1	RefSeq	CDS	2733649	2734026	.	+	0	ID=cds2561;Parent=gene2897;Dbxref=Genbank:YP_404474.1,GeneID:3796414;Name=YP_404474.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404474.1;transl_table=11
NC_007606.1	RefSeq	region	2734268	2735137	.	-	.	ID=id480;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	2735130	2736386	.	+	.	ID=id481;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2735185	2735487	.	+	.	ID=gene2898;Dbxref=GeneID:3796417;Name=SDY_2960;Note=SDY2960;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2960
NC_007606.1	RefSeq	CDS	2735185	2735487	.	+	0	ID=cds2562;Parent=gene2898;Dbxref=Genbank:YP_404477.1,GeneID:3796417;Name=YP_404477.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_404477.1;transl_table=11
NC_007606.1	RefSeq	gene	2735628	2736440	.	+	.	ID=gene2899;Dbxref=GeneID:3796418;Name=SDY_2961;Note=SDY2961;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2961
NC_007606.1	RefSeq	CDS	2735628	2736440	.	+	0	ID=cds2563;Parent=gene2899;Dbxref=Genbank:YP_404478.1,GeneID:3796418;Name=YP_404478.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_404478.1;transl_table=11
NC_007606.1	RefSeq	region	2736454	2737221	.	-	.	ID=id482;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2736469	2736846	.	-	.	ID=gene2900;Dbxref=GeneID:3796419;Name=insB;Note=SDY2962;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2962
NC_007606.1	RefSeq	CDS	2736469	2736846	.	-	0	ID=cds2564;Parent=gene2900;Dbxref=Genbank:YP_404479.1,GeneID:3796419;Name=YP_404479.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404479.1;transl_table=11
NC_007606.1	RefSeq	gene	2736891	2737166	.	-	.	ID=gene2901;Dbxref=GeneID:3796420;Name=insA;Note=SDY2963;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2963
NC_007606.1	RefSeq	CDS	2736891	2737166	.	-	0	ID=cds2565;Parent=gene2901;Dbxref=Genbank:YP_404480.1,GeneID:3796420;Name=YP_404480.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404480.1;transl_table=11
NC_007606.1	RefSeq	gene	2737233	2737967	.	-	.	ID=gene2902;Dbxref=GeneID:3796421;Name=cysH;Note=SDY2964;gbkey=Gene;gene=cysH;gene_biotype=protein_coding;locus_tag=SDY_2964
NC_007606.1	RefSeq	CDS	2737233	2737967	.	-	0	ID=cds2566;Parent=gene2902;Dbxref=Genbank:YP_404481.1,GeneID:3796421;Name=YP_404481.1;Note=catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite;gbkey=CDS;gene=cysH;product=phosphoadenosine phosphosulfate reductase;protein_id=YP_404481.1;transl_table=11
NC_007606.1	RefSeq	gene	2738041	2739753	.	-	.	ID=gene2903;Dbxref=GeneID:3796422;Name=cysI;Note=SDY2965;gbkey=Gene;gene=cysI;gene_biotype=protein_coding;locus_tag=SDY_2965
NC_007606.1	RefSeq	CDS	2738041	2739753	.	-	0	ID=cds2567;Parent=gene2903;Dbxref=Genbank:YP_404482.1,GeneID:3796422;Name=YP_404482.1;Note=hemoprotein%3B NADPH dependent%3B with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide;gbkey=CDS;gene=cysI;product=sulfite reductase subunit beta;protein_id=YP_404482.1;transl_table=11
NC_007606.1	RefSeq	gene	2739753	2741552	.	-	.	ID=gene2904;Dbxref=GeneID:3798041;Name=cysJ;Note=SDY2966;gbkey=Gene;gene=cysJ;gene_biotype=protein_coding;locus_tag=SDY_2966
NC_007606.1	RefSeq	CDS	2739753	2741552	.	-	0	ID=cds2568;Parent=gene2904;Dbxref=Genbank:YP_404483.1,GeneID:3798041;Name=YP_404483.1;Note=catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate%3B a flavoprotein with flavin reductase activity;gbkey=CDS;gene=cysJ;product=sulfite reductase subunit alpha;protein_id=YP_404483.1;transl_table=11
NC_007606.1	RefSeq	gene	2741868	2742233	.	+	.	ID=gene2905;Dbxref=GeneID:3798042;Name=ygcM;Note=SDY2967;gbkey=Gene;gene=ygcM;gene_biotype=protein_coding;locus_tag=SDY_2967
NC_007606.1	RefSeq	CDS	2741868	2742233	.	+	0	ID=cds2569;Parent=gene2905;Dbxref=Genbank:YP_404484.1,GeneID:3798042;Name=YP_404484.1;Note=Code: H%3B COG: COG0720;gbkey=CDS;gene=ygcM;product=6-pyruvoyl tetrahydrobiopterin synthase;protein_id=YP_404484.1;transl_table=11
NC_007606.1	RefSeq	gene	2742281	2743582	.	+	.	ID=gene2906;Dbxref=GeneID:3798043;Name=ygcN;Note=SDY2968;gbkey=Gene;gene=ygcN;gene_biotype=protein_coding;locus_tag=SDY_2968
NC_007606.1	RefSeq	CDS	2742281	2743582	.	+	0	ID=cds2570;Parent=gene2906;Dbxref=Genbank:YP_404485.1,GeneID:3798043;Name=YP_404485.1;Note=Code: C%3B COG: COG0644;gbkey=CDS;gene=ygcN;product=hypothetical protein;protein_id=YP_404485.1;transl_table=11
NC_007606.1	RefSeq	gene	2743537	2743833	.	+	.	ID=gene2907;Dbxref=GeneID:3798044;Name=ygcO;Note=SDY2969;gbkey=Gene;gene=ygcO;gene_biotype=protein_coding;locus_tag=SDY_2969
NC_007606.1	RefSeq	CDS	2743537	2743833	.	+	0	ID=cds2571;Parent=gene2907;Dbxref=Genbank:YP_404486.1,GeneID:3798044;Name=YP_404486.1;Note=Code: C%3B COG: COG2440;gbkey=CDS;gene=ygcO;product=hypothetical protein;protein_id=YP_404486.1;transl_table=11
NC_007606.1	RefSeq	gene	2743850	2744425	.	+	.	ID=gene2908;Dbxref=GeneID:3798045;Name=ygcP;Note=SDY2970;gbkey=Gene;gene=ygcP;gene_biotype=protein_coding;locus_tag=SDY_2970
NC_007606.1	RefSeq	CDS	2743850	2744425	.	+	0	ID=cds2572;Parent=gene2908;Dbxref=Genbank:YP_404487.1,GeneID:3798045;Name=YP_404487.1;Note=Code: K%3B COG: COG1954;gbkey=CDS;gene=ygcP;product=anti-terminator regulatory protein;protein_id=YP_404487.1;transl_table=11
NC_007606.1	RefSeq	gene	2744573	2745466	.	-	.	ID=gene2909;Dbxref=GeneID:3798046;Name=ygcQ;Note=SDY2971%3B contains in-frame stop codon%3B original product:  flavoprotein;gbkey=Gene;gene=ygcQ;gene_biotype=pseudogene;locus_tag=SDY_2971;pseudo=true
NC_007606.1	RefSeq	gene	2745430	2746215	.	-	.	ID=gene2910;Dbxref=GeneID:3798047;Name=ygcR;Note=SDY2972%3B contains in-frame stop codon%3B original product:  transport protein;gbkey=Gene;gene=ygcR;gene_biotype=pseudogene;locus_tag=SDY_2972;pseudo=true
NC_007606.1	RefSeq	gene	2746187	2747596	.	-	.	ID=gene2911;Dbxref=GeneID:3798048;Name=ygcS;Note=SDY2973;gbkey=Gene;gene=ygcS;gene_biotype=protein_coding;locus_tag=SDY_2973
NC_007606.1	RefSeq	CDS	2746187	2747596	.	-	0	ID=cds2573;Parent=gene2911;Dbxref=Genbank:YP_404488.1,GeneID:3798048;Name=YP_404488.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=ygcS;product=transport protein;protein_id=YP_404488.1;transl_table=11
NC_007606.1	RefSeq	gene	2747618	2749072	.	-	.	ID=gene2912;Dbxref=GeneID:3798049;Name=SDY_2974;Note=SDY2974;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_2974;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	2749101	2749866	.	-	.	ID=id483;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2749115	2749510	.	-	.	ID=gene2913;Dbxref=GeneID:3798050;Name=SDY_2975;Note=SDY2975;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2975
NC_007606.1	RefSeq	CDS	2749115	2749510	.	-	0	ID=cds2574;Parent=gene2913;Dbxref=Genbank:YP_404490.1,GeneID:3798050;Name=YP_404490.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404490.1;transl_table=11
NC_007606.1	RefSeq	gene	2749537	2749809	.	-	.	ID=gene2914;Dbxref=GeneID:18263123;Name=SDY_4734;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4734
NC_007606.1	RefSeq	CDS	2749537	2749809	.	-	0	ID=cds2575;Parent=gene2914;Dbxref=Genbank:YP_009000809.1,GeneID:18263123;Name=YP_009000809.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000809.1;transl_table=11
NC_007606.1	RefSeq	gene	2749916	2750701	.	-	.	ID=gene2915;Dbxref=GeneID:3798051;Name=ygcW;Note=SDY2976;gbkey=Gene;gene=ygcW;gene_biotype=protein_coding;locus_tag=SDY_2976
NC_007606.1	RefSeq	CDS	2749916	2750701	.	-	0	ID=cds2576;Parent=gene2915;Dbxref=Genbank:YP_404491.1,GeneID:3798051;Name=YP_404491.1;Note=Code: IQR%3B COG: COG1028;gbkey=CDS;gene=ygcW;product=oxidoreductase;protein_id=YP_404491.1;transl_table=11
NC_007606.1	RefSeq	gene	2751018	2752295	.	+	.	ID=gene2916;Dbxref=GeneID:3798052;Name=yqcE;Note=SDY2977%3B contains in-frame stop codon%3B original product:  transport protein;gbkey=Gene;gene=yqcE;gene_biotype=pseudogene;locus_tag=SDY_2977;pseudo=true
NC_007606.1	RefSeq	gene	2752322	2753800	.	+	.	ID=gene2917;Dbxref=GeneID:3798053;Name=ygcE;Note=SDY2978;gbkey=Gene;gene=ygcE;gene_biotype=protein_coding;locus_tag=SDY_2978
NC_007606.1	RefSeq	CDS	2752322	2753800	.	+	0	ID=cds2577;Parent=gene2917;Dbxref=Genbank:YP_404492.1,GeneID:3798053;Name=YP_404492.1;Note=Code: G%3B COG: COG1070;gbkey=CDS;gene=ygcE;product=kinase;protein_id=YP_404492.1;transl_table=11
NC_007606.1	RefSeq	region	2753962	2755292	.	-	.	ID=id484;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2753973	2754878	.	-	.	ID=gene2918;Dbxref=GeneID:3798054;Name=SDY_2979;Note=SDY2979;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2979
NC_007606.1	RefSeq	CDS	2753973	2754878	.	-	0	ID=cds2578;Parent=gene2918;Dbxref=Genbank:YP_404493.2,GeneID:3798054;Name=YP_404493.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_404493.2;transl_table=11
NC_007606.1	RefSeq	gene	2754836	2755201	.	-	.	ID=gene2919;Dbxref=GeneID:3798055;Name=SDY_2980;Note=SDY2980;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2980
NC_007606.1	RefSeq	CDS	2754836	2755201	.	-	0	ID=cds2579;Parent=gene2919;Dbxref=Genbank:YP_404494.1,GeneID:3798055;Name=YP_404494.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_404494.1;transl_table=11
NC_007606.1	RefSeq	gene	2755549	2756220	.	-	.	ID=gene2920;Dbxref=GeneID:3798056;Name=ygcF;Note=SDY2981;gbkey=Gene;gene=ygcF;gene_biotype=protein_coding;locus_tag=SDY_2981
NC_007606.1	RefSeq	CDS	2755549	2756220	.	-	0	ID=cds2580;Parent=gene2920;Dbxref=Genbank:YP_404495.1,GeneID:3798056;Name=YP_404495.1;Note=Code: O%3B COG: COG0602;gbkey=CDS;gene=ygcF;product=hypothetical protein;protein_id=YP_404495.1;transl_table=11
NC_007606.1	RefSeq	region	2756407	2757172	.	+	.	ID=id485;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2756464	2756736	.	+	.	ID=gene2921;Dbxref=GeneID:18263124;Name=SDY_4735;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4735
NC_007606.1	RefSeq	CDS	2756464	2756736	.	+	0	ID=cds2581;Parent=gene2921;Dbxref=Genbank:YP_009000810.1,GeneID:18263124;Name=YP_009000810.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000810.1;transl_table=11
NC_007606.1	RefSeq	gene	2756763	2757158	.	+	.	ID=gene2922;Dbxref=GeneID:3798058;Name=SDY_2983;Note=SDY2983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2983
NC_007606.1	RefSeq	CDS	2756763	2757158	.	+	0	ID=cds2582;Parent=gene2922;Dbxref=Genbank:YP_404497.1,GeneID:3798058;Name=YP_404497.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404497.1;transl_table=11
NC_007606.1	RefSeq	region	2757713	2758478	.	-	.	ID=id486;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2757727	2758122	.	-	.	ID=gene2923;Dbxref=GeneID:3797388;Name=SDY_2986;Note=SDY2986;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2986
NC_007606.1	RefSeq	CDS	2757727	2758122	.	-	0	ID=cds2583;Parent=gene2923;Dbxref=Genbank:YP_404500.1,GeneID:3797388;Name=YP_404500.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404500.1;transl_table=11
NC_007606.1	RefSeq	gene	2758149	2758421	.	-	.	ID=gene2924;Dbxref=GeneID:18263125;Name=SDY_4736;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4736
NC_007606.1	RefSeq	CDS	2758149	2758421	.	-	0	ID=cds2584;Parent=gene2924;Dbxref=Genbank:YP_009000811.1,GeneID:18263125;Name=YP_009000811.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000811.1;transl_table=11
NC_007606.1	RefSeq	region	2758479	2759252	.	+	.	ID=id487;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2758535	2758837	.	+	.	ID=gene2925;Dbxref=GeneID:3797389;Name=SDY_2987;Note=SDY2987;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2987
NC_007606.1	RefSeq	CDS	2758535	2758837	.	+	0	ID=cds2585;Parent=gene2925;Dbxref=Genbank:YP_404501.1,GeneID:3797389;Name=YP_404501.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_404501.1;transl_table=11
NC_007606.1	RefSeq	region	2759253	2760516	.	-	.	ID=id488;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2760150	2760452	.	-	.	ID=gene2926;Dbxref=GeneID:3797392;Name=SDY_2990;Note=SDY2990;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2990
NC_007606.1	RefSeq	CDS	2760150	2760452	.	-	0	ID=cds2586;Parent=gene2926;Dbxref=Genbank:YP_404504.1,GeneID:3797392;Name=YP_404504.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_404504.1;transl_table=11
NC_007606.1	RefSeq	gene	2760757	2761467	.	+	.	ID=gene2927;Dbxref=GeneID:3797394;Name=SDY_2992;Note=SDY2992;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2992
NC_007606.1	RefSeq	CDS	2760757	2761467	.	+	0	ID=cds2587;Parent=gene2927;Dbxref=Genbank:YP_404506.1,GeneID:3797394;Name=YP_404506.1;Note=Code: R%3B COG: COG1512;gbkey=CDS;product=hypothetical protein;protein_id=YP_404506.1;transl_table=11
NC_007606.1	RefSeq	region	2761446	2762213	.	-	.	ID=id489;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2761461	2761838	.	-	.	ID=gene2928;Dbxref=GeneID:3797395;Name=insB;Note=SDY2993;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_2993
NC_007606.1	RefSeq	CDS	2761461	2761838	.	-	0	ID=cds2588;Parent=gene2928;Dbxref=Genbank:YP_404507.1,GeneID:3797395;Name=YP_404507.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404507.1;transl_table=11
NC_007606.1	RefSeq	gene	2761883	2762158	.	-	.	ID=gene2929;Dbxref=GeneID:3797396;Name=insA;Note=SDY2994;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_2994
NC_007606.1	RefSeq	CDS	2761883	2762158	.	-	0	ID=cds2589;Parent=gene2929;Dbxref=Genbank:YP_404508.1,GeneID:3797396;Name=YP_404508.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404508.1;transl_table=11
NC_007606.1	RefSeq	gene	2762297	2762563	.	+	.	ID=gene2930;Dbxref=GeneID:3797397;Name=SDY_2995;Note=SDY2995;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_2995
NC_007606.1	RefSeq	CDS	2762297	2762563	.	+	0	ID=cds2590;Parent=gene2930;Dbxref=Genbank:YP_404509.1,GeneID:3797397;Name=YP_404509.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404509.1;transl_table=11
NC_007606.1	RefSeq	gene	2762623	2763921	.	-	.	ID=gene2931;Dbxref=GeneID:3797398;Name=eno;Note=SDY2996;gbkey=Gene;gene=eno;gene_biotype=protein_coding;locus_tag=SDY_2996
NC_007606.1	RefSeq	CDS	2762623	2763921	.	-	0	ID=cds2591;Parent=gene2931;Dbxref=Genbank:YP_404510.1,GeneID:3797398;Name=YP_404510.1;Note=enolase%3B catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis;gbkey=CDS;gene=eno;product=phosphopyruvate hydratase;protein_id=YP_404510.1;transl_table=11
NC_007606.1	RefSeq	gene	2764009	2765646	.	-	.	ID=gene2932;Dbxref=GeneID:3797399;Name=pyrG;Note=SDY2997;gbkey=Gene;gene=pyrG;gene_biotype=protein_coding;locus_tag=SDY_2997
NC_007606.1	RefSeq	CDS	2764009	2765646	.	-	0	ID=cds2592;Parent=gene2932;Dbxref=Genbank:YP_404511.1,GeneID:3797399;Name=YP_404511.1;Note=CTP synthase%3B cytidine triphosphate synthetase%3B catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen%3B in Escherichia coli this enzyme forms a homotetramer;gbkey=CDS;gene=pyrG;product=CTP synthetase;protein_id=YP_404511.1;transl_table=11
NC_007606.1	RefSeq	gene	2765869	2766660	.	-	.	ID=gene2933;Dbxref=GeneID:3797400;Name=mazG;Note=SDY2998;gbkey=Gene;gene=mazG;gene_biotype=protein_coding;locus_tag=SDY_2998
NC_007606.1	RefSeq	CDS	2765869	2766660	.	-	0	ID=cds2593;Parent=gene2933;Dbxref=Genbank:YP_404512.1,GeneID:3797400;Name=YP_404512.1;Note=functions in degradation of stringent response intracellular messenger ppGpp%3B in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF%3B activity of MazG is inhibited by MazEF in vitro%3B ppGpp inhibits mazEF expression%3B MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation%3B MazG also interacts with the GTPase Era;gbkey=CDS;gene=mazG;product=nucleoside triphosphate pyrophosphohydrolase;protein_id=YP_404512.1;transl_table=11
NC_007606.1	RefSeq	gene	2766731	2767066	.	-	.	ID=gene2934;Dbxref=GeneID:3797401;Name=chpA;Note=SDY2999;gbkey=Gene;gene=chpA;gene_biotype=protein_coding;locus_tag=SDY_2999
NC_007606.1	RefSeq	CDS	2766731	2767066	.	-	0	ID=cds2594;Parent=gene2934;Dbxref=Genbank:YP_404513.1,GeneID:3797401;Name=YP_404513.1;Note=MazF%3B endoribonuclease%3B toxin of the ChpA-ChpR toxin-antitoxin system;gbkey=CDS;gene=chpA;product=toxin ChpA;protein_id=YP_404513.1;transl_table=11
NC_007606.1	RefSeq	gene	2767066	2767314	.	-	.	ID=gene2935;Dbxref=GeneID:3797402;Name=chpR;Note=SDY3000;gbkey=Gene;gene=chpR;gene_biotype=protein_coding;locus_tag=SDY_3000
NC_007606.1	RefSeq	CDS	2767066	2767314	.	-	0	ID=cds2595;Parent=gene2935;Dbxref=Genbank:YP_404514.1,GeneID:3797402;Name=YP_404514.1;Note=part of the MazF-MazE toxin-antitoxin system%3B conteracts MazF;gbkey=CDS;gene=chpR;product=antitoxin MazE;protein_id=YP_404514.1;transl_table=11
NC_007606.1	RefSeq	gene	2767392	2769626	.	-	.	ID=gene2936;Dbxref=GeneID:3797403;Name=relA;Note=SDY3001;gbkey=Gene;gene=relA;gene_biotype=protein_coding;locus_tag=SDY_3001
NC_007606.1	RefSeq	CDS	2767392	2769626	.	-	0	ID=cds2596;Parent=gene2936;Dbxref=Genbank:YP_404515.1,GeneID:3797403;Name=YP_404515.1;Note=(p)ppGpp synthetase%3B catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP;gbkey=CDS;gene=relA;product=GDP/GTP pyrophosphokinase;protein_id=YP_404515.1;transl_table=11
NC_007606.1	RefSeq	gene	2769674	2770975	.	-	.	ID=gene2937;Dbxref=GeneID:3797404;Name=rumA;Note=SDY3002;gbkey=Gene;gene=rumA;gene_biotype=protein_coding;locus_tag=SDY_3002
NC_007606.1	RefSeq	CDS	2769674	2770975	.	-	0	ID=cds2597;Parent=gene2937;Dbxref=Genbank:YP_404516.1,GeneID:3797404;Name=YP_404516.1;Note=in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA%3B binds an iron-sulfur cluster [4Fe-4S];gbkey=CDS;gene=rumA;product=23S rRNA 5-methyluridine methyltransferase;protein_id=YP_404516.1;transl_table=11
NC_007606.1	RefSeq	gene	2771032	2773788	.	+	.	ID=gene2938;Dbxref=GeneID:3797405;Name=barA;Note=SDY3003;gbkey=Gene;gene=barA;gene_biotype=protein_coding;locus_tag=SDY_3003
NC_007606.1	RefSeq	CDS	2771032	2773788	.	+	0	ID=cds2598;Parent=gene2938;Dbxref=Genbank:YP_404517.1,GeneID:3797405;Name=YP_404517.1;Note=part of the two-component regulatory system with UvrY%3B involved in the regulation of carbon metabolism via the csrA/csrB regulatory system;gbkey=CDS;gene=barA;product=hybrid sensory histidine kinase BarA;protein_id=YP_404517.1;transl_table=11
NC_007606.1	RefSeq	gene	2774020	2775360	.	-	.	ID=gene2939;Dbxref=GeneID:3797406;Name=ygcX;Note=SDY3004%3B contains in-frame stop codon%3B original product:  glucarate dehydratase;gbkey=Gene;gene=ygcX;gene_biotype=pseudogene;locus_tag=SDY_3004;pseudo=true
NC_007606.1	RefSeq	gene	2775381	2776720	.	-	.	ID=gene2940;Dbxref=GeneID:3796344;Name=ygcY;Note=SDY3005%3B frameshift%3B original product:  glucarate dehydratase;gbkey=Gene;gene=ygcY;gene_biotype=pseudogene;locus_tag=SDY_3005;pseudo=true
NC_007606.1	RefSeq	gene	2776717	2778063	.	-	.	ID=gene2941;Dbxref=GeneID:3796345;Name=SDY_3006;Note=SDY3006%3B contains in-frame stop codon%3B original product:  transport protein;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3006;pseudo=true
NC_007606.1	RefSeq	gene	2778498	2778947	.	-	.	ID=gene2942;Dbxref=GeneID:3796346;Name=SDY_3007;Note=SDY3007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3007
NC_007606.1	RefSeq	CDS	2778498	2778947	.	-	0	ID=cds2599;Parent=gene2942;Dbxref=Genbank:YP_404518.1,GeneID:3796346;Name=YP_404518.1;Note=''An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group'';gbkey=CDS;product=flavodoxin;protein_id=YP_404518.1;transl_table=11
NC_007606.1	RefSeq	gene	2778965	2779747	.	-	.	ID=gene2943;Dbxref=GeneID:3796347;Name=yqcB;Note=SDY3008;gbkey=Gene;gene=yqcB;gene_biotype=protein_coding;locus_tag=SDY_3008
NC_007606.1	RefSeq	CDS	2778965	2779747	.	-	0	ID=cds2600;Parent=gene2943;Dbxref=Genbank:YP_404519.1,GeneID:3796347;Name=YP_404519.1;Note=catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp;gbkey=CDS;gene=yqcB;product=tRNA pseudouridine synthase C;protein_id=YP_404519.1;transl_table=11
NC_007606.1	RefSeq	gene	2779747	2780076	.	-	.	ID=gene2944;Dbxref=GeneID:3796348;Name=SDY_3009;Note=SDY3009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3009
NC_007606.1	RefSeq	CDS	2779747	2780076	.	-	0	ID=cds2601;Parent=gene2944;Dbxref=Genbank:YP_404520.1,GeneID:3796348;Name=YP_404520.1;Note=Code: S%3B COG: COG3098;gbkey=CDS;product=hypothetical protein;protein_id=YP_404520.1;transl_table=11
NC_007606.1	RefSeq	gene	2780698	2781243	.	-	.	ID=gene2945;Dbxref=GeneID:3796349;Name=syd;Note=SDY3010;gbkey=Gene;gene=syd;gene_biotype=protein_coding;locus_tag=SDY_3010
NC_007606.1	RefSeq	CDS	2780698	2781243	.	-	0	ID=cds2602;Parent=gene2945;Dbxref=Genbank:YP_404521.1,GeneID:3796349;Name=YP_404521.1;Note=SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function;gbkey=CDS;gene=syd;product=SecY interacting protein Syd;protein_id=YP_404521.1;transl_table=11
NC_007606.1	RefSeq	gene	2781311	2782159	.	+	.	ID=gene2946;Dbxref=GeneID:3796350;Name=queF;Note=SDY3011;gbkey=Gene;gene=queF;gene_biotype=protein_coding;locus_tag=SDY_3011
NC_007606.1	RefSeq	CDS	2781311	2782159	.	+	0	ID=cds2603;Parent=gene2946;Dbxref=Genbank:YP_404522.1,GeneID:3796350;Name=YP_404522.1;Note=catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis;gbkey=CDS;gene=queF;product=7-cyano-7-deazaguanine reductase;protein_id=YP_404522.1;transl_table=11
NC_007606.1	RefSeq	gene	2782271	2783635	.	+	.	ID=gene2947;Dbxref=GeneID:3796351;Name=ygdH;Note=SDY3012;gbkey=Gene;gene=ygdH;gene_biotype=protein_coding;locus_tag=SDY_3012
NC_007606.1	RefSeq	CDS	2782271	2783635	.	+	0	ID=cds2604;Parent=gene2947;Dbxref=Genbank:YP_404523.1,GeneID:3796351;Name=YP_404523.1;Note=Code: R%3B COG: COG1611;gbkey=CDS;gene=ygdH;product=hypothetical protein;protein_id=YP_404523.1;transl_table=11
NC_007606.1	RefSeq	gene	2784192	2785481	.	+	.	ID=gene2948;Dbxref=GeneID:3796352;Name=sdaC;Note=SDY3013;gbkey=Gene;gene=sdaC;gene_biotype=protein_coding;locus_tag=SDY_3013
NC_007606.1	RefSeq	CDS	2784192	2785481	.	+	0	ID=cds2605;Parent=gene2948;Dbxref=Genbank:YP_404524.1,GeneID:3796352;Name=YP_404524.1;Note=Code: E%3B COG: COG0814;gbkey=CDS;gene=sdaC;product=serine transporter;protein_id=YP_404524.1;transl_table=11
NC_007606.1	RefSeq	gene	2785539	2786906	.	+	.	ID=gene2949;Dbxref=GeneID:3796353;Name=sdaB;Note=SDY3014;gbkey=Gene;gene=sdaB;gene_biotype=protein_coding;locus_tag=SDY_3014
NC_007606.1	RefSeq	CDS	2785539	2786906	.	+	0	ID=cds2606;Parent=gene2949;Dbxref=Genbank:YP_404525.1,GeneID:3796353;Name=YP_404525.1;Note=Code: E%3B COG: COG1760;gbkey=CDS;gene=sdaB;product=L-serine dehydratase;protein_id=YP_404525.1;transl_table=11
NC_007606.1	RefSeq	gene	2786928	2787773	.	+	.	ID=gene2950;Dbxref=GeneID:3796354;Name=xni;Note=SDY3015;gbkey=Gene;gene=xni;gene_biotype=protein_coding;gene_synonym=exo;locus_tag=SDY_3015
NC_007606.1	RefSeq	CDS	2786928	2787773	.	+	0	ID=cds2607;Parent=gene2950;Dbxref=Genbank:YP_404526.1,GeneID:3796354;Name=YP_404526.1;Note=has 3'-5' exonuclease activity that preferentially acts on ssDNA%3B also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites%3B can remove 3' phosphoglycolate groups;gbkey=CDS;gene=xni;product=exonuclease IX;protein_id=YP_404526.1;transl_table=11
NC_007606.1	RefSeq	gene	2787828	2788979	.	-	.	ID=gene2951;Dbxref=GeneID:3796355;Name=fucO;Note=SDY3016;gbkey=Gene;gene=fucO;gene_biotype=protein_coding;locus_tag=SDY_3016
NC_007606.1	RefSeq	CDS	2787828	2788979	.	-	0	ID=cds2608;Parent=gene2951;Dbxref=Genbank:YP_404527.1,GeneID:3796355;Name=YP_404527.1;Note=Code: C%3B COG: COG1454;gbkey=CDS;gene=fucO;product=L-1%2C2-propanediol oxidoreductase;protein_id=YP_404527.1;transl_table=11
NC_007606.1	RefSeq	gene	2789004	2789651	.	-	.	ID=gene2952;Dbxref=GeneID:3796356;Name=fucA;Note=SDY3017;gbkey=Gene;gene=fucA;gene_biotype=protein_coding;locus_tag=SDY_3017
NC_007606.1	RefSeq	CDS	2789004	2789651	.	-	0	ID=cds2609;Parent=gene2952;Dbxref=Genbank:YP_404528.1,GeneID:3796356;Name=YP_404528.1;Note=catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate;gbkey=CDS;gene=fucA;product=L-fuculose phosphate aldolase;protein_id=YP_404528.1;transl_table=11
NC_007606.1	RefSeq	gene	2790199	2790979	.	+	.	ID=gene2953;Dbxref=GeneID:3796357;Name=fucP;Note=SDY3018%3B contains iso-IS1 insertion%3B original product: fucose permease;gbkey=Gene;gene=fucP;gene_biotype=pseudogene;locus_tag=SDY_3018;pseudo=true
NC_007606.1	RefSeq	region	2790760	2791525	.	+	.	ID=id490;gbkey=mobile_element;gene=fucP
NC_007606.1	RefSeq	gene	2791116	2791511	.	+	.	ID=gene2954;Dbxref=GeneID:3796358;Name=SDY_3019;Note=SDY3019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3019
NC_007606.1	RefSeq	CDS	2791116	2791511	.	+	0	ID=cds2610;Parent=gene2954;Dbxref=Genbank:YP_404529.1,GeneID:3796358;Name=YP_404529.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404529.1;transl_table=11
NC_007606.1	RefSeq	gene	2792322	2794097	.	+	.	ID=gene2955;Dbxref=GeneID:3796359;Name=fucI;Note=SDY3020;gbkey=Gene;gene=fucI;gene_biotype=protein_coding;locus_tag=SDY_3020
NC_007606.1	RefSeq	CDS	2792322	2794097	.	+	0	ID=cds2611;Parent=gene2955;Dbxref=Genbank:YP_404530.1,GeneID:3796359;Name=YP_404530.1;Note=catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose;gbkey=CDS;gene=fucI;product=L-fucose isomerase;protein_id=YP_404530.1;transl_table=11
NC_007606.1	RefSeq	gene	2794176	2795624	.	+	.	ID=gene2956;Dbxref=GeneID:3796360;Name=fucK;Note=SDY3021;gbkey=Gene;gene=fucK;gene_biotype=protein_coding;locus_tag=SDY_3021
NC_007606.1	RefSeq	CDS	2794176	2795624	.	+	0	ID=cds2612;Parent=gene2956;Dbxref=Genbank:YP_404531.1,GeneID:3796360;Name=YP_404531.1;Note=Code: G%3B COG: COG1070;gbkey=CDS;gene=fucK;product=L-fuculokinase;protein_id=YP_404531.1;transl_table=11
NC_007606.1	RefSeq	gene	2795626	2796048	.	+	.	ID=gene2957;Dbxref=GeneID:3796361;Name=fucU;Note=SDY3022;gbkey=Gene;gene=fucU;gene_biotype=protein_coding;locus_tag=SDY_3022
NC_007606.1	RefSeq	CDS	2795626	2796048	.	+	0	ID=cds2613;Parent=gene2957;Dbxref=Genbank:YP_404532.1,GeneID:3796361;Name=YP_404532.1;Note=Code: G%3B COG: COG4154;gbkey=CDS;gene=fucU;product=L-fucose mutarotase;protein_id=YP_404532.1;transl_table=11
NC_007606.1	RefSeq	gene	2796106	2796837	.	+	.	ID=gene2958;Dbxref=GeneID:3796362;Name=fucR;Note=SDY3023;gbkey=Gene;gene=fucR;gene_biotype=protein_coding;locus_tag=SDY_3023
NC_007606.1	RefSeq	CDS	2796106	2796837	.	+	0	ID=cds2614;Parent=gene2958;Dbxref=Genbank:YP_404533.1,GeneID:3796362;Name=YP_404533.1;Note=regulates expression of genes involved in L-fucose utilization;gbkey=CDS;gene=fucR;product=DNA-binding transcriptional activator FucR;protein_id=YP_404533.1;transl_table=11
NC_007606.1	RefSeq	gene	2796881	2797981	.	-	.	ID=gene2959;Dbxref=GeneID:3796113;Name=ygdE;Note=SDY3024;gbkey=Gene;gene=ygdE;gene_biotype=protein_coding;locus_tag=SDY_3024
NC_007606.1	RefSeq	CDS	2796881	2797981	.	-	0	ID=cds2615;Parent=gene2959;Dbxref=Genbank:YP_404534.1,GeneID:3796113;Name=YP_404534.1;Note=Code: R%3B COG: COG2933;gbkey=CDS;gene=ygdE;product=RNA 2'-O-ribose methyltransferase;protein_id=YP_404534.1;transl_table=11
NC_007606.1	RefSeq	gene	2797974	2798369	.	-	.	ID=gene2960;Dbxref=GeneID:3796114;Name=ygdD;Note=SDY3025;gbkey=Gene;gene=ygdD;gene_biotype=protein_coding;locus_tag=SDY_3025
NC_007606.1	RefSeq	CDS	2797974	2798369	.	-	0	ID=cds2616;Parent=gene2960;Dbxref=Genbank:YP_404535.1,GeneID:3796114;Name=YP_404535.1;Note=Code: S%3B COG: COG2363;gbkey=CDS;gene=ygdD;product=hypothetical protein;protein_id=YP_404535.1;transl_table=11
NC_007606.1	RefSeq	gene	2798388	2799305	.	-	.	ID=gene2961;Dbxref=GeneID:3796115;Name=gcvA;Note=SDY3026;gbkey=Gene;gene=gcvA;gene_biotype=protein_coding;locus_tag=SDY_3026
NC_007606.1	RefSeq	CDS	2798388	2799305	.	-	0	ID=cds2617;Parent=gene2961;Dbxref=Genbank:YP_404536.1,GeneID:3796115;Name=YP_404536.1;Note=Glycine cleavage system transcriptional activator%3B activates the gcvTHP operon in the presence of glycine and represses the operon in its absence;gbkey=CDS;gene=gcvA;product=DNA-binding transcriptional activator GcvA;protein_id=YP_404536.1;transl_table=11
NC_007606.1	RefSeq	gene	2799656	2799886	.	-	.	ID=gene2962;Dbxref=GeneID:3796116;Name=SDY_3027;Note=SDY3027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3027
NC_007606.1	RefSeq	CDS	2799656	2799886	.	-	0	ID=cds2618;Parent=gene2962;Dbxref=Genbank:YP_404537.1,GeneID:3796116;Name=YP_404537.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404537.1;transl_table=11
NC_007606.1	RefSeq	gene	2800075	2801280	.	+	.	ID=gene2963;Dbxref=GeneID:3796117;Name=SDY_3028;Note=SDY3028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3028
NC_007606.1	RefSeq	CDS	2800075	2801280	.	+	0	ID=cds2619;Parent=gene2963;Dbxref=Genbank:YP_404538.1,GeneID:3796117;Name=YP_404538.1;Note=Code: E%3B COG: COG0520;gbkey=CDS;product=cysteine sulfinate desulfinase;protein_id=YP_404538.1;transl_table=11
NC_007606.1	RefSeq	gene	2801280	2801723	.	+	.	ID=gene2964;Dbxref=GeneID:3796118;Name=ygdK;Note=SDY3029;gbkey=Gene;gene=ygdK;gene_biotype=protein_coding;locus_tag=SDY_3029
NC_007606.1	RefSeq	CDS	2801280	2801723	.	+	0	ID=cds2620;Parent=gene2964;Dbxref=Genbank:YP_404539.1,GeneID:3796118;Name=YP_404539.1;Note=Code: R%3B COG: COG2166;gbkey=CDS;gene=ygdK;product=hypothetical protein;protein_id=YP_404539.1;transl_table=11
NC_007606.1	RefSeq	gene	2801774	2802580	.	-	.	ID=gene2965;Dbxref=GeneID:3796119;Name=ygdL;Note=SDY3030;gbkey=Gene;gene=ygdL;gene_biotype=protein_coding;locus_tag=SDY_3030
NC_007606.1	RefSeq	CDS	2801774	2802580	.	-	0	ID=cds2621;Parent=gene2965;Dbxref=Genbank:YP_404540.1,GeneID:3796119;Name=YP_404540.1;Note=Code: H%3B COG: COG1179;gbkey=CDS;gene=ygdL;product=sulfur acceptor protein CsdL;protein_id=YP_404540.1;transl_table=11
NC_007606.1	RefSeq	gene	2802819	2803916	.	-	.	ID=gene2966;Dbxref=GeneID:3796120;Name=mltA;Note=SDY3031;gbkey=Gene;gene=mltA;gene_biotype=protein_coding;locus_tag=SDY_3031
NC_007606.1	RefSeq	CDS	2802819	2803916	.	-	0	ID=cds2622;Parent=gene2966;Dbxref=Genbank:YP_404541.1,GeneID:3796120;Name=YP_404541.1;Note=''membrane-bound%2C lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues'';gbkey=CDS;gene=mltA;product=murein transglycosylase A;protein_id=YP_404541.1;transl_table=11
NC_007606.1	RefSeq	gene	2804124	2804200	.	+	.	ID=gene2967;Dbxref=GeneID:3796121;Name=SDY_3032;Note=SDY3032;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3032
NC_007606.1	RefSeq	tRNA	2804124	2804200	.	+	.	ID=rna56;Parent=gene2967;Dbxref=GeneID:3796121;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	exon	2804124	2804200	.	+	.	ID=id491;Parent=rna56;Dbxref=GeneID:3796121;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	gene	2804235	2804311	.	+	.	ID=gene2968;Dbxref=GeneID:3796122;Name=SDY_3033;Note=SDY3033;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3033
NC_007606.1	RefSeq	tRNA	2804235	2804311	.	+	.	ID=rna57;Parent=gene2968;Dbxref=GeneID:3796122;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	exon	2804235	2804311	.	+	.	ID=id492;Parent=rna57;Dbxref=GeneID:3796122;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	gene	2804385	2805728	.	-	.	ID=gene2969;Dbxref=GeneID:3796123;Name=SDY_3034;Note=SDY3034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3034
NC_007606.1	RefSeq	CDS	2804385	2805728	.	-	0	ID=cds2623;Parent=gene2969;Dbxref=Genbank:YP_404542.1,GeneID:3796123;Name=YP_404542.1;Note=Code: M%3B COG: COG0860;gbkey=CDS;product=amidase;protein_id=YP_404542.1;transl_table=11
NC_007606.1	RefSeq	gene	2805870	2807201	.	+	.	ID=gene2970;Dbxref=GeneID:3796124;Name=argA;Note=SDY3035;gbkey=Gene;gene=argA;gene_biotype=protein_coding;locus_tag=SDY_3035
NC_007606.1	RefSeq	CDS	2805870	2807201	.	+	0	ID=cds2624;Parent=gene2970;Dbxref=Genbank:YP_404543.1,GeneID:3796124;Name=YP_404543.1;Note=catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis;gbkey=CDS;gene=argA;product=N-acetylglutamate synthase;protein_id=YP_404543.1;transl_table=11
NC_007606.1	RefSeq	gene	2807263	2809089	.	-	.	ID=gene2971;Dbxref=GeneID:3796125;Name=recD;Note=SDY3036;gbkey=Gene;gene=recD;gene_biotype=protein_coding;locus_tag=SDY_3036
NC_007606.1	RefSeq	CDS	2807263	2809089	.	-	0	ID=cds2625;Parent=gene2971;Dbxref=Genbank:YP_404544.1,GeneID:3796125;Name=YP_404544.1;Note=helicase/nuclease%3B with RecBC catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recD;product=exonuclease V subunit alpha;protein_id=YP_404544.1;transl_table=11
NC_007606.1	RefSeq	gene	2809089	2812631	.	-	.	ID=gene2972;Dbxref=GeneID:3796126;Name=recB;Note=SDY3037;gbkey=Gene;gene=recB;gene_biotype=protein_coding;locus_tag=SDY_3037
NC_007606.1	RefSeq	CDS	2809089	2812631	.	-	0	ID=cds2626;Parent=gene2972;Dbxref=Genbank:YP_404545.1,GeneID:3796126;Name=YP_404545.1;Note=helicase/nuclease%3B with RecCD catalyzes the exonucleolytic cleavage of DNA%3B RecD has 5' to 3' helicase activity;gbkey=CDS;gene=recB;product=exonuclease V subunit beta;protein_id=YP_404545.1;transl_table=11
NC_007606.1	RefSeq	gene	2812624	2815512	.	-	.	ID=gene2973;Dbxref=GeneID:3796127;Name=ptr;Note=SDY3038;gbkey=Gene;gene=ptr;gene_biotype=protein_coding;locus_tag=SDY_3038
NC_007606.1	RefSeq	CDS	2812624	2815512	.	-	0	ID=cds2627;Parent=gene2973;Dbxref=Genbank:YP_404546.1,GeneID:3796127;Name=YP_404546.1;Note=Code: O%3B COG: COG1025;gbkey=CDS;gene=ptr;product=protease III;protein_id=YP_404546.1;transl_table=11
NC_007606.1	RefSeq	gene	2815688	2819056	.	-	.	ID=gene2974;Dbxref=GeneID:3796128;Name=recC;Note=SDY3039;gbkey=Gene;gene=recC;gene_biotype=protein_coding;locus_tag=SDY_3039
NC_007606.1	RefSeq	CDS	2815688	2819056	.	-	0	ID=cds2628;Parent=gene2974;Dbxref=Genbank:YP_404547.1,GeneID:3796128;Name=YP_404547.1;Note=catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides%3B component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination;gbkey=CDS;gene=recC;product=exonuclease V subunit gamma;protein_id=YP_404547.1;transl_table=11
NC_007606.1	RefSeq	gene	2819069	2819392	.	-	.	ID=gene2975;Dbxref=GeneID:3796129;Name=ppdC;Note=SDY3040;gbkey=Gene;gene=ppdC;gene_biotype=protein_coding;locus_tag=SDY_3040
NC_007606.1	RefSeq	CDS	2819069	2819392	.	-	0	ID=cds2629;Parent=gene2975;Dbxref=Genbank:YP_404548.1,GeneID:3796129;Name=YP_404548.1;Note=Code: NU%3B COG: COG4967;gbkey=CDS;gene=ppdC;product=hypothetical protein;protein_id=YP_404548.1;transl_table=11
NC_007606.1	RefSeq	gene	2819377	2819784	.	-	.	ID=gene2976;Dbxref=GeneID:3796130;Name=ygdB;Note=SDY3041;gbkey=Gene;gene=ygdB;gene_biotype=protein_coding;locus_tag=SDY_3041
NC_007606.1	RefSeq	CDS	2819377	2819784	.	-	0	ID=cds2630;Parent=gene2976;Dbxref=Genbank:YP_404549.2,GeneID:3796130;Name=YP_404549.2;gbkey=CDS;gene=ygdB;product=hypothetical protein;protein_id=YP_404549.2;transl_table=11
NC_007606.1	RefSeq	gene	2819781	2820344	.	-	.	ID=gene2977;Dbxref=GeneID:3795925;Name=ppdB;Note=SDY3042;gbkey=Gene;gene=ppdB;gene_biotype=protein_coding;locus_tag=SDY_3042
NC_007606.1	RefSeq	CDS	2819781	2820344	.	-	0	ID=cds2631;Parent=gene2977;Dbxref=Genbank:YP_404550.1,GeneID:3795925;Name=YP_404550.1;Note=Code: U%3B COG: COG4795;gbkey=CDS;gene=ppdB;product=hypothetical protein;protein_id=YP_404550.1;transl_table=11
NC_007606.1	RefSeq	gene	2820335	2820805	.	-	.	ID=gene2978;Dbxref=GeneID:3795926;Name=ppdA;Note=SDY3043;gbkey=Gene;gene=ppdA;gene_biotype=protein_coding;locus_tag=SDY_3043
NC_007606.1	RefSeq	CDS	2820335	2820805	.	-	0	ID=cds2632;Parent=gene2978;Dbxref=Genbank:YP_404551.1,GeneID:3795926;Name=YP_404551.1;Note=Code: NU%3B COG: COG2165;gbkey=CDS;gene=ppdA;product=hypothetical protein;protein_id=YP_404551.1;transl_table=11
NC_007606.1	RefSeq	gene	2820990	2821784	.	-	.	ID=gene2979;Dbxref=GeneID:3795927;Name=thyA;Note=SDY3044;gbkey=Gene;gene=thyA;gene_biotype=protein_coding;locus_tag=SDY_3044
NC_007606.1	RefSeq	CDS	2820990	2821784	.	-	0	ID=cds2633;Parent=gene2979;Dbxref=Genbank:YP_404552.1,GeneID:3795927;Name=YP_404552.1;Note=''ThyA%3B catalyzes formation of dTMP and 7%2C8-dihydrofolate from 5%2C10-methylenetetrahydrofolate and dUMP%3B involved in deoxyribonucleotide biosynthesis%3B there are 2 copies in some Bacilli%2C one of which appears to be phage-derived'';gbkey=CDS;gene=thyA;product=thymidylate synthase;protein_id=YP_404552.1;transl_table=11
NC_007606.1	RefSeq	gene	2821791	2822666	.	-	.	ID=gene2980;Dbxref=GeneID:3795928;Name=lgt;Note=SDY3045;gbkey=Gene;gene=lgt;gene_biotype=protein_coding;locus_tag=SDY_3045
NC_007606.1	RefSeq	CDS	2821791	2822666	.	-	0	ID=cds2634;Parent=gene2980;Dbxref=Genbank:YP_404553.1,GeneID:3795928;Name=YP_404553.1;Note=transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein;gbkey=CDS;gene=lgt;product=prolipoprotein diacylglyceryl transferase;protein_id=YP_404553.1;transl_table=11
NC_007606.1	RefSeq	gene	2822818	2825064	.	-	.	ID=gene2981;Dbxref=GeneID:3795929;Name=ptsP;Note=SDY3046;gbkey=Gene;gene=ptsP;gene_biotype=protein_coding;locus_tag=SDY_3046
NC_007606.1	RefSeq	CDS	2822818	2825064	.	-	0	ID=cds2635;Parent=gene2981;Dbxref=Genbank:YP_404554.1,GeneID:3795929;Name=YP_404554.1;Note=member of a second PTS chain involved in nitrogen metabolism%3B PtsP phosphorylates NPr;gbkey=CDS;gene=ptsP;product=fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain;protein_id=YP_404554.1;transl_table=11
NC_007606.1	RefSeq	gene	2825077	2825607	.	-	.	ID=gene2982;Dbxref=GeneID:3795930;Name=ygdP;Note=SDY3047;gbkey=Gene;gene=ygdP;gene_biotype=protein_coding;locus_tag=SDY_3047
NC_007606.1	RefSeq	CDS	2825077	2825607	.	-	0	ID=cds2636;Parent=gene2982;Dbxref=Genbank:YP_404555.1,GeneID:3795930;Name=YP_404555.1;Note=hydrolyzes diadenosine polyphosphate;gbkey=CDS;gene=ygdP;product=dinucleoside polyphosphate hydrolase;protein_id=YP_404555.1;transl_table=11
NC_007606.1	RefSeq	gene	2826292	2826981	.	+	.	ID=gene2983;Dbxref=GeneID:3795931;Name=mutH;Note=SDY3048;gbkey=Gene;gene=mutH;gene_biotype=protein_coding;locus_tag=SDY_3048
NC_007606.1	RefSeq	CDS	2826292	2826981	.	+	0	ID=cds2637;Parent=gene2983;Dbxref=Genbank:YP_404556.1,GeneID:3795931;Name=YP_404556.1;Note=MutH%3B Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair;gbkey=CDS;gene=mutH;product=DNA mismatch repair protein;protein_id=YP_404556.1;transl_table=11
NC_007606.1	RefSeq	gene	2827050	2827763	.	+	.	ID=gene2984;Dbxref=GeneID:3795932;Name=SDY_3049;Note=SDY3049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3049
NC_007606.1	RefSeq	CDS	2827050	2827763	.	+	0	ID=cds2638;Parent=gene2984;Dbxref=Genbank:YP_404557.1,GeneID:3795932;Name=YP_404557.1;Note=Code: P%3B COG: COG0861;gbkey=CDS;product=transport protein;protein_id=YP_404557.1;transl_table=11
NC_007606.1	RefSeq	gene	2827901	2828119	.	+	.	ID=gene2985;Dbxref=GeneID:3795933;Name=SDY_3050;Note=SDY3050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3050
NC_007606.1	RefSeq	CDS	2827901	2828119	.	+	0	ID=cds2639;Parent=gene2985;Dbxref=Genbank:YP_404558.1,GeneID:3795933;Name=YP_404558.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404558.1;transl_table=11
NC_007606.1	RefSeq	gene	2828227	2829267	.	+	.	ID=gene2986;Dbxref=GeneID:3795934;Name=tas;Note=SDY3051;gbkey=Gene;gene=tas;gene_biotype=protein_coding;locus_tag=SDY_3051
NC_007606.1	RefSeq	CDS	2828227	2829267	.	+	0	ID=cds2640;Parent=gene2986;Dbxref=Genbank:YP_404559.1,GeneID:3795934;Name=YP_404559.1;Note=complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain%3B member of the aldo/keto reductase 2 family%3B crystal structure of purified Escherichia coli protein shows bound NADPH;gbkey=CDS;gene=tas;product=aldo-keto reductase;protein_id=YP_404559.1;transl_table=11
NC_007606.1	RefSeq	gene	2829299	2830492	.	-	.	ID=gene2987;Dbxref=GeneID:3795935;Name=ygeD;Note=SDY3052;gbkey=Gene;gene=ygeD;gene_biotype=protein_coding;locus_tag=SDY_3052
NC_007606.1	RefSeq	CDS	2829299	2830492	.	-	0	ID=cds2641;Parent=gene2987;Dbxref=Genbank:YP_404560.1,GeneID:3795935;Name=YP_404560.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=ygeD;product=lysophospholipid transporter LplT;protein_id=YP_404560.1;transl_table=11
NC_007606.1	RefSeq	gene	2830485	2832644	.	-	.	ID=gene2988;Dbxref=GeneID:3795936;Name=aas;Note=SDY3053;gbkey=Gene;gene=aas;gene_biotype=protein_coding;locus_tag=SDY_3053
NC_007606.1	RefSeq	CDS	2830485	2832644	.	-	0	ID=cds2642;Parent=gene2988;Dbxref=Genbank:YP_404561.1,GeneID:3795936;Name=YP_404561.1;Note=Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1;gbkey=CDS;gene=aas;product=bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase;protein_id=YP_404561.1;transl_table=11
NC_007606.1	RefSeq	gene	2833230	2834261	.	+	.	ID=gene2989;Dbxref=GeneID:3795937;Name=galR;Note=SDY3054;gbkey=Gene;gene=galR;gene_biotype=protein_coding;locus_tag=SDY_3054
NC_007606.1	RefSeq	CDS	2833230	2834261	.	+	0	ID=cds2643;Parent=gene2989;Dbxref=Genbank:YP_404562.1,GeneID:3795937;Name=YP_404562.1;Note=controls transcription of galETKM;gbkey=CDS;gene=galR;product=DNA-binding transcriptional regulator GalR;protein_id=YP_404562.1;transl_table=11
NC_007606.1	RefSeq	gene	2834268	2835530	.	-	.	ID=gene2990;Dbxref=GeneID:3795938;Name=lysA;Note=SDY3055;gbkey=Gene;gene=lysA;gene_biotype=protein_coding;locus_tag=SDY_3055
NC_007606.1	RefSeq	CDS	2834268	2835530	.	-	0	ID=cds2644;Parent=gene2990;Dbxref=Genbank:YP_404563.1,GeneID:3795938;Name=YP_404563.1;Note=catalyzes the decarboxylation of diaminopimelate into lysine%3B pyridoxal phosphate(PLP)-binding;gbkey=CDS;gene=lysA;product=diaminopimelate decarboxylase;protein_id=YP_404563.1;transl_table=11
NC_007606.1	RefSeq	gene	2835652	2836587	.	+	.	ID=gene2991;Dbxref=GeneID:3795939;Name=lysR;Note=SDY3056;gbkey=Gene;gene=lysR;gene_biotype=protein_coding;locus_tag=SDY_3056
NC_007606.1	RefSeq	CDS	2835652	2836587	.	+	0	ID=cds2645;Parent=gene2991;Dbxref=Genbank:YP_404564.1,GeneID:3795939;Name=YP_404564.1;Note=activates the transcription of the lysA gene encoding diaminopimelate decarboxylase;gbkey=CDS;gene=lysR;product=LysR family transcriptional regulator;protein_id=YP_404564.1;transl_table=11
NC_007606.1	RefSeq	gene	2836574	2837257	.	-	.	ID=gene2992;Dbxref=GeneID:3795940;Name=ygeA;Note=SDY3057;gbkey=Gene;gene=ygeA;gene_biotype=protein_coding;locus_tag=SDY_3057
NC_007606.1	RefSeq	CDS	2836574	2837257	.	-	0	ID=cds2646;Parent=gene2992;Dbxref=Genbank:YP_404565.1,GeneID:3795940;Name=YP_404565.1;Note=Code: M%3B COG: COG1794;gbkey=CDS;gene=ygeA;product=racemase;protein_id=YP_404565.1;transl_table=11
NC_007606.1	RefSeq	gene	2837386	2838615	.	-	.	ID=gene2993;Dbxref=GeneID:3795941;Name=araE;Note=SDY3058;gbkey=Gene;gene=araE;gene_biotype=protein_coding;locus_tag=SDY_3058
NC_007606.1	RefSeq	CDS	2837386	2838615	.	-	0	ID=cds2647;Parent=gene2993;Dbxref=Genbank:YP_404566.1,GeneID:3795941;Name=YP_404566.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=araE;product=low-affinity L-arabinose transport system proton symport protein;protein_id=YP_404566.1;transl_table=11
NC_007606.1	RefSeq	region	2838651	2838847	.	-	.	ID=id493;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	2838848	2839615	.	-	.	ID=id494;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2838863	2839240	.	-	.	ID=gene2994;Dbxref=GeneID:3795942;Name=insB;Note=SDY3059;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3059
NC_007606.1	RefSeq	CDS	2838863	2839240	.	-	0	ID=cds2648;Parent=gene2994;Dbxref=Genbank:YP_404567.1,GeneID:3795942;Name=YP_404567.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404567.1;transl_table=11
NC_007606.1	RefSeq	gene	2839285	2839560	.	-	.	ID=gene2995;Dbxref=GeneID:3795943;Name=insA;Note=SDY3060;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3060
NC_007606.1	RefSeq	CDS	2839285	2839560	.	-	0	ID=cds2649;Parent=gene2995;Dbxref=Genbank:YP_404568.1,GeneID:3795943;Name=YP_404568.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_404568.1;transl_table=11
NC_007606.1	RefSeq	gene	2839759	2840586	.	-	.	ID=gene2996;Dbxref=GeneID:3796059;Name=dkgA;Note=SDY3061;gbkey=Gene;gene=dkgA;gene_biotype=protein_coding;locus_tag=SDY_3061
NC_007606.1	RefSeq	CDS	2839759	2840586	.	-	0	ID=cds2650;Parent=gene2996;Dbxref=Genbank:YP_404569.2,GeneID:3796059;Name=YP_404569.2;Note=''methylglyoxal reductase/#-keto ester reductase%3B catalyzes the reduction of 2%2C5-diketo-D-gluconic acid to 2-keto-L-gulonic acid%3B also catalyzes the reduction of methylglyoxal%2C ethyl-2-methylacetoacetate and ethyl-acetoacetate'';gbkey=CDS;gene=dkgA;product=2%2C5-diketo-D-gluconate reductase A;protein_id=YP_404569.2;transl_table=11
NC_007606.1	RefSeq	gene	2840691	2841854	.	-	.	ID=gene2997;Dbxref=GeneID:3796061;Name=yqhD;Note=SDY3063;gbkey=Gene;gene=yqhD;gene_biotype=protein_coding;locus_tag=SDY_3063
NC_007606.1	RefSeq	CDS	2840691	2841854	.	-	0	ID=cds2651;Parent=gene2997;Dbxref=Genbank:YP_404570.1,GeneID:3796061;Name=YP_404570.1;Note=Code: C%3B COG: COG1979;gbkey=CDS;gene=yqhD;product=oxidoreductase;protein_id=YP_404570.1;transl_table=11
NC_007606.1	RefSeq	gene	2841820	2842947	.	+	.	ID=gene2998;Dbxref=GeneID:3796060;Name=yqhC;Note=SDY3062;gbkey=Gene;gene=yqhC;gene_biotype=protein_coding;locus_tag=SDY_3062
NC_007606.1	RefSeq	CDS	2841820	2842947	.	+	0	ID=cds2652;Parent=gene2998;Dbxref=Genbank:YP_404571.1,GeneID:3796060;Name=YP_404571.1;Note=Code: K%3B COG: COG2207;gbkey=CDS;gene=yqhC;product=AraC family transcriptional regulator;protein_id=YP_404571.1;transl_table=11
NC_007606.1	RefSeq	gene	2842987	2843646	.	-	.	ID=gene2999;Dbxref=GeneID:3796062;Name=yghB;Note=SDY3064;gbkey=Gene;gene=yghB;gene_biotype=protein_coding;locus_tag=SDY_3064
NC_007606.1	RefSeq	CDS	2842987	2843646	.	-	0	ID=cds2653;Parent=gene2999;Dbxref=Genbank:YP_404572.1,GeneID:3796062;Name=YP_404572.1;Note=Code: S%3B COG: COG0586;gbkey=CDS;gene=yghB;product=hypothetical protein;protein_id=YP_404572.1;transl_table=11
NC_007606.1	RefSeq	gene	2843787	2844974	.	-	.	ID=gene3000;Dbxref=GeneID:3796063;Name=metC;Note=SDY3065;gbkey=Gene;gene=metC;gene_biotype=protein_coding;locus_tag=SDY_3065
NC_007606.1	RefSeq	CDS	2843787	2844974	.	-	0	ID=cds2654;Parent=gene3000;Dbxref=Genbank:YP_404573.1,GeneID:3796063;Name=YP_404573.1;Note=catalyzes the formation of L-homocysteine from cystathionine;gbkey=CDS;gene=metC;product=cystathionine beta-lyase;protein_id=YP_404573.1;transl_table=11
NC_007606.1	RefSeq	gene	2845078	2845233	.	+	.	ID=gene3001;Dbxref=GeneID:3796064;Name=SDY_3066;Note=SDY3066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3066
NC_007606.1	RefSeq	CDS	2845078	2845233	.	+	0	ID=cds2655;Parent=gene3001;Dbxref=Genbank:YP_404574.1,GeneID:3796064;Name=YP_404574.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404574.1;transl_table=11
NC_007606.1	RefSeq	gene	2845226	2845960	.	+	.	ID=gene3002;Dbxref=GeneID:3796065;Name=exbB;Note=SDY3067;gbkey=Gene;gene=exbB;gene_biotype=protein_coding;locus_tag=SDY_3067
NC_007606.1	RefSeq	CDS	2845226	2845960	.	+	0	ID=cds2656;Parent=gene3002;Dbxref=Genbank:YP_404575.1,GeneID:3796065;Name=YP_404575.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;gene=exbB;product=biopolymer transport protein ExbB;protein_id=YP_404575.1;transl_table=11
NC_007606.1	RefSeq	gene	2845967	2846392	.	+	.	ID=gene3003;Dbxref=GeneID:3796066;Name=exbD;Note=SDY3068;gbkey=Gene;gene=exbD;gene_biotype=protein_coding;locus_tag=SDY_3068
NC_007606.1	RefSeq	CDS	2845967	2846392	.	+	0	ID=cds2657;Parent=gene3003;Dbxref=Genbank:YP_404576.1,GeneID:3796066;Name=YP_404576.1;Note=membrane spanning protein in TonB-ExbB-ExbD complex%3B involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell;gbkey=CDS;gene=exbD;product=biopolymer transport protein ExbD;protein_id=YP_404576.1;transl_table=11
NC_007606.1	RefSeq	gene	2846431	2847315	.	-	.	ID=gene3004;Dbxref=GeneID:3796067;Name=yghA;Note=SDY3069;gbkey=Gene;gene=yghA;gene_biotype=protein_coding;locus_tag=SDY_3069
NC_007606.1	RefSeq	CDS	2846431	2847315	.	-	0	ID=cds2658;Parent=gene3004;Dbxref=Genbank:YP_404577.1,GeneID:3796067;Name=YP_404577.1;Note=Code: IQR%3B COG: COG1028;gbkey=CDS;gene=yghA;product=oxidoreductase;protein_id=YP_404577.1;transl_table=11
NC_007606.1	RefSeq	gene	2847506	2848000	.	+	.	ID=gene3005;Dbxref=GeneID:3796068;Name=yqhA;Note=SDY3070;gbkey=Gene;gene=yqhA;gene_biotype=protein_coding;locus_tag=SDY_3070
NC_007606.1	RefSeq	CDS	2847506	2848000	.	+	0	ID=cds2659;Parent=gene3005;Dbxref=Genbank:YP_404578.1,GeneID:3796068;Name=YP_404578.1;Note=Code: S%3B COG: COG2862;gbkey=CDS;gene=yqhA;product=hypothetical protein;protein_id=YP_404578.1;transl_table=11
NC_007606.1	RefSeq	region	2848285	2849052	.	-	.	ID=id495;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2848300	2848677	.	-	.	ID=gene3006;Dbxref=GeneID:3796069;Name=insB;Note=SDY3071;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3071
NC_007606.1	RefSeq	CDS	2848300	2848677	.	-	0	ID=cds2660;Parent=gene3006;Dbxref=Genbank:YP_404579.1,GeneID:3796069;Name=YP_404579.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404579.1;transl_table=11
NC_007606.1	RefSeq	gene	2848722	2848997	.	-	.	ID=gene3007;Dbxref=GeneID:3796070;Name=insA;Note=SDY3072;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3072
NC_007606.1	RefSeq	CDS	2848722	2848997	.	-	0	ID=cds2661;Parent=gene3007;Dbxref=Genbank:YP_404580.1,GeneID:3796070;Name=YP_404580.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404580.1;transl_table=11
NC_007606.1	RefSeq	gene	2849048	2849857	.	-	.	ID=gene3008;Dbxref=GeneID:3796071;Name=SDY_3073;Note=SDY3073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3073
NC_007606.1	RefSeq	CDS	2849048	2849857	.	-	0	ID=cds2662;Parent=gene3008;Dbxref=Genbank:YP_404581.1,GeneID:3796071;Name=YP_404581.1;Note=Code: C%3B COG: COG0667;gbkey=CDS;product=reductase;protein_id=YP_404581.1;transl_table=11
NC_007606.1	RefSeq	gene	2849975	2850902	.	+	.	ID=gene3009;Dbxref=GeneID:3796072;Name=yghYX;Note=SDY3074%3B frameshift%3B original product: Predicted hydrolase;gbkey=Gene;gene=yghYX;gene_biotype=pseudogene;locus_tag=SDY_3074;pseudo=true
NC_007606.1	RefSeq	gene	2851021	2851308	.	+	.	ID=gene3010;Dbxref=GeneID:3796073;Name=SDY_3075;Note=SDY3075;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3075
NC_007606.1	RefSeq	CDS	2851021	2851308	.	+	0	ID=cds2663;Parent=gene3010;Dbxref=Genbank:YP_404582.1,GeneID:3796073;Name=YP_404582.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404582.1;transl_table=11
NC_007606.1	RefSeq	gene	2851497	2852615	.	+	.	ID=gene3011;Dbxref=GeneID:3796074;Name=SDY_3076;Note=SDY3076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3076
NC_007606.1	RefSeq	CDS	2851497	2852615	.	+	0	ID=cds2664;Parent=gene3011;Dbxref=Genbank:YP_404583.1,GeneID:3796074;Name=YP_404583.1;Note=involved in hydrogen uptake;gbkey=CDS;product=hydrogenase 2 small subunit;protein_id=YP_404583.1;transl_table=11
NC_007606.1	RefSeq	gene	2852618	2853604	.	+	.	ID=gene3012;Dbxref=GeneID:3796075;Name=hybA;Note=SDY3077;gbkey=Gene;gene=hybA;gene_biotype=protein_coding;locus_tag=SDY_3077
NC_007606.1	RefSeq	CDS	2852618	2853604	.	+	0	ID=cds2665;Parent=gene3012;Dbxref=Genbank:YP_404584.1,GeneID:3796075;Name=YP_404584.1;Note=Fe-S ferrodoxin type component%3B participates in the periplasmic electron-transferring activity of hydrogenase 2;gbkey=CDS;gene=hybA;product=hydrogenase 2 protein HybA;protein_id=YP_404584.1;transl_table=11
NC_007606.1	RefSeq	gene	2853594	2854772	.	+	.	ID=gene3013;Dbxref=GeneID:3796076;Name=hybB;Note=SDY3078;gbkey=Gene;gene=hybB;gene_biotype=protein_coding;locus_tag=SDY_3078
NC_007606.1	RefSeq	CDS	2853594	2854772	.	+	0	ID=cds2666;Parent=gene3013;Dbxref=Genbank:YP_404585.1,GeneID:3796076;Name=YP_404585.1;Note=''HybB%3B cytochrome b subunit of the hydrogenase 2 enzyme%2C composed of HybA%2C B%2C C%2C and O subunits'';gbkey=CDS;gene=hybB;product=hydrogenase 2 b cytochrome subunit;protein_id=YP_404585.1;transl_table=11
NC_007606.1	RefSeq	gene	2854769	2856472	.	+	.	ID=gene3014;Dbxref=GeneID:3796077;Name=hybC;Note=SDY3079;gbkey=Gene;gene=hybC;gene_biotype=protein_coding;locus_tag=SDY_3079
NC_007606.1	RefSeq	CDS	2854769	2856472	.	+	0	ID=cds2667;Parent=gene3014;Dbxref=Genbank:YP_404586.1,GeneID:3796077;Name=YP_404586.1;Note=involved in hydrogen uptake;gbkey=CDS;gene=hybC;product=hydrogenase 2 large subunit;protein_id=YP_404586.1;transl_table=11
NC_007606.1	RefSeq	gene	2856472	2856966	.	+	.	ID=gene3015;Dbxref=GeneID:3796078;Name=hybD;Note=SDY3080;gbkey=Gene;gene=hybD;gene_biotype=protein_coding;locus_tag=SDY_3080
NC_007606.1	RefSeq	CDS	2856472	2856966	.	+	0	ID=cds2668;Parent=gene3015;Dbxref=Genbank:YP_404587.1,GeneID:3796078;Name=YP_404587.1;Note=protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC);gbkey=CDS;gene=hybD;product=hydrogenase 2 maturation endopeptidase;protein_id=YP_404587.1;transl_table=11
NC_007606.1	RefSeq	gene	2856959	2857447	.	+	.	ID=gene3016;Dbxref=GeneID:3799729;Name=hybE;Note=SDY3081;gbkey=Gene;gene=hybE;gene_biotype=protein_coding;locus_tag=SDY_3081
NC_007606.1	RefSeq	CDS	2856959	2857447	.	+	0	ID=cds2669;Parent=gene3016;Dbxref=Genbank:YP_404588.1,GeneID:3799729;Name=YP_404588.1;gbkey=CDS;gene=hybE;product=hydrogenase 2-specific chaperone;protein_id=YP_404588.1;transl_table=11
NC_007606.1	RefSeq	gene	2857440	2857781	.	+	.	ID=gene3017;Dbxref=GeneID:3799730;Name=hybF;Note=SDY3082;gbkey=Gene;gene=hybF;gene_biotype=protein_coding;locus_tag=SDY_3082
NC_007606.1	RefSeq	CDS	2857440	2857781	.	+	0	ID=cds2670;Parent=gene3017;Dbxref=Genbank:YP_404589.1,GeneID:3799730;Name=YP_404589.1;Note=plays a role in hydrogenase nickel cofactor insertion;gbkey=CDS;gene=hybF;product=hydrogenase nickel incorporation protein HybF;protein_id=YP_404589.1;transl_table=11
NC_007606.1	RefSeq	gene	2857794	2858042	.	+	.	ID=gene3018;Dbxref=GeneID:3799731;Name=hybG;Note=SDY3083;gbkey=Gene;gene=hybG;gene_biotype=protein_coding;locus_tag=SDY_3083
NC_007606.1	RefSeq	CDS	2857794	2858042	.	+	0	ID=cds2671;Parent=gene3018;Dbxref=Genbank:YP_404590.1,GeneID:3799731;Name=YP_404590.1;Note=Code: O%3B COG: COG0298;gbkey=CDS;gene=hybG;product=hydrogenase 2 accessory protein HypG;protein_id=YP_404590.1;transl_table=11
NC_007606.1	RefSeq	gene	2858165	2859079	.	-	.	ID=gene3019;Dbxref=GeneID:3799732;Name=SDY_3084;Note=SDY3084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3084
NC_007606.1	RefSeq	CDS	2858165	2859079	.	-	0	ID=cds2672;Parent=gene3019;Dbxref=Genbank:YP_404591.1,GeneID:3799732;Name=YP_404591.1;Note=YghU%3B B2989%3B one of eight  glutathione transferases from E. coli;gbkey=CDS;product=glutathione S-transferase YghU;protein_id=YP_404591.1;transl_table=11
NC_007606.1	RefSeq	gene	2859236	2861095	.	+	.	ID=gene3020;Dbxref=GeneID:3799733;Name=gsp;Note=SDY3085;gbkey=Gene;gene=gsp;gene_biotype=protein_coding;locus_tag=SDY_3085
NC_007606.1	RefSeq	CDS	2859236	2861095	.	+	0	ID=cds2673;Parent=gene3020;Dbxref=Genbank:YP_404592.1,GeneID:3799733;Name=YP_404592.1;Note=catalyzes the formation of glutathionylspermidine from glutathione and spermidine%3B also catalyzes the reverse reaction;gbkey=CDS;gene=gsp;product=bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase;protein_id=YP_404592.1;transl_table=11
NC_007606.1	RefSeq	gene	2861387	2862886	.	+	.	ID=gene3021;Dbxref=GeneID:3799734;Name=pitB;Note=SDY3086;gbkey=Gene;gene=pitB;gene_biotype=protein_coding;locus_tag=SDY_3086
NC_007606.1	RefSeq	CDS	2861387	2862886	.	+	0	ID=cds2674;Parent=gene3021;Dbxref=Genbank:YP_404593.1,GeneID:3799734;Name=YP_404593.1;Note=Code: P%3B COG: COG0306;gbkey=CDS;gene=pitB;product=low-affinity phosphate transport protein;protein_id=YP_404593.1;transl_table=11
NC_007606.1	RefSeq	gene	2862935	2863639	.	-	.	ID=gene3022;Dbxref=GeneID:3799735;Name=yghT;Note=SDY3087;gbkey=Gene;gene=yghT;gene_biotype=protein_coding;locus_tag=SDY_3087
NC_007606.1	RefSeq	CDS	2862935	2863639	.	-	0	ID=cds2675;Parent=gene3022;Dbxref=Genbank:YP_404594.1,GeneID:3799735;Name=YP_404594.1;gbkey=CDS;gene=yghT;product=hypothetical protein;protein_id=YP_404594.1;transl_table=11
NC_007606.1	RefSeq	region	2863626	2864393	.	+	.	ID=id496;gbkey=mobile_element;gene=yghT
NC_007606.1	RefSeq	gene	2863681	2863956	.	+	.	ID=gene3023;Dbxref=GeneID:3799736;Name=insA;Note=SDY3088;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3088
NC_007606.1	RefSeq	CDS	2863681	2863956	.	+	0	ID=cds2676;Parent=gene3023;Dbxref=Genbank:YP_404595.1,GeneID:3799736;Name=YP_404595.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_404595.1;transl_table=11
NC_007606.1	RefSeq	gene	2864313	2865290	.	-	.	ID=gene3024;Dbxref=GeneID:3799737;Name=SDY_3089;Note=SDY3089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3089
NC_007606.1	RefSeq	CDS	2864313	2865290	.	-	0	ID=cds2677;Parent=gene3024;Dbxref=Genbank:YP_404596.1,GeneID:3799737;Name=YP_404596.1;Note=Code: MG%3B COG: COG0702;gbkey=CDS;product=hypothetical protein;protein_id=YP_404596.1;transl_table=11
NC_007606.1	RefSeq	gene	2865287	2866975	.	-	.	ID=gene3025;Dbxref=GeneID:3799738;Name=SDY_3090;Note=SDY3090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3090
NC_007606.1	RefSeq	CDS	2865287	2866975	.	-	0	ID=cds2678;Parent=gene3025;Dbxref=Genbank:YP_404597.2,GeneID:3799738;Name=YP_404597.2;Note=activates fatty acids by binding to coenzyme A;gbkey=CDS;product=acyl-CoA synthetase;protein_id=YP_404597.2;transl_table=11
NC_007606.1	RefSeq	region	2867005	2867772	.	-	.	ID=id497;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2867021	2867416	.	-	.	ID=gene3026;Dbxref=GeneID:3799739;Name=SDY_3091;Note=SDY3091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3091
NC_007606.1	RefSeq	CDS	2867021	2867416	.	-	0	ID=cds2679;Parent=gene3026;Dbxref=Genbank:YP_404598.1,GeneID:3799739;Name=YP_404598.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404598.1;transl_table=11
NC_007606.1	RefSeq	gene	2867443	2867715	.	-	.	ID=gene3027;Dbxref=GeneID:18263126;Name=SDY_4737;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4737
NC_007606.1	RefSeq	CDS	2867443	2867715	.	-	0	ID=cds2680;Parent=gene3027;Dbxref=Genbank:YP_009000812.1,GeneID:18263126;Name=YP_009000812.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000812.1;transl_table=11
NC_007606.1	RefSeq	gene	2867995	2868825	.	+	.	ID=gene3028;Dbxref=GeneID:3799740;Name=gspC;Note=SDY3092;gbkey=Gene;gene=gspC;gene_biotype=protein_coding;locus_tag=SDY_3092
NC_007606.1	RefSeq	CDS	2867995	2868825	.	+	0	ID=cds2681;Parent=gene3028;Dbxref=Genbank:YP_404599.1,GeneID:3799740;Name=YP_404599.1;Note=''part of the general (type II) secretion pathway (GSP)%2C a signal sequence-dependent process responsible for protein export%3B involved in trans-location of exoproteins from the cytoplasm to the periplasm'';gbkey=CDS;gene=gspC;product=type II secretion protein GspC;protein_id=YP_404599.1;transl_table=11
NC_007606.1	RefSeq	gene	2869065	2870900	.	+	.	ID=gene3029;Dbxref=GeneID:3799741;Name=gspD;Note=SDY3093;gbkey=Gene;gene=gspD;gene_biotype=protein_coding;locus_tag=SDY_3093
NC_007606.1	RefSeq	CDS	2869065	2870900	.	+	0	ID=cds2682;Parent=gene3029;Dbxref=Genbank:YP_404600.1,GeneID:3799741;Name=YP_404600.1;Note=Code: NU%3B COG: COG1450;gbkey=CDS;gene=gspD;product=type II secretion protein;protein_id=YP_404600.1;transl_table=11
NC_007606.1	RefSeq	gene	2870900	2872393	.	+	.	ID=gene3030;Dbxref=GeneID:3799742;Name=gspE;Note=SDY3094;gbkey=Gene;gene=gspE;gene_biotype=protein_coding;locus_tag=SDY_3094
NC_007606.1	RefSeq	CDS	2870900	2872393	.	+	0	ID=cds2683;Parent=gene3030;Dbxref=Genbank:YP_404601.1,GeneID:3799742;Name=YP_404601.1;Note=Code: NU%3B COG: COG2804;gbkey=CDS;gene=gspE;product=type II secretion protein;protein_id=YP_404601.1;transl_table=11
NC_007606.1	RefSeq	gene	2872393	2873592	.	+	.	ID=gene3031;Dbxref=GeneID:3799743;Name=gspF;Note=SDY3095;gbkey=Gene;gene=gspF;gene_biotype=protein_coding;locus_tag=SDY_3095
NC_007606.1	RefSeq	CDS	2872393	2873592	.	+	0	ID=cds2684;Parent=gene3031;Dbxref=Genbank:YP_404602.1,GeneID:3799743;Name=YP_404602.1;Note=Code: NU%3B COG: COG1459;gbkey=CDS;gene=gspF;product=type II secretion protein;protein_id=YP_404602.1;transl_table=11
NC_007606.1	RefSeq	gene	2873633	2874088	.	+	.	ID=gene3032;Dbxref=GeneID:3799744;Name=gspG;Note=SDY3096;gbkey=Gene;gene=gspG;gene_biotype=protein_coding;locus_tag=SDY_3096
NC_007606.1	RefSeq	CDS	2873633	2874088	.	+	0	ID=cds2685;Parent=gene3032;Dbxref=Genbank:YP_404603.1,GeneID:3799744;Name=YP_404603.1;Note=Code: NU%3B COG: COG2165;gbkey=CDS;gene=gspG;product=type II secretion protein;protein_id=YP_404603.1;transl_table=11
NC_007606.1	RefSeq	gene	2874125	2874655	.	+	.	ID=gene3033;Dbxref=GeneID:3799745;Name=gspH;Note=SDY3097;gbkey=Gene;gene=gspH;gene_biotype=protein_coding;locus_tag=SDY_3097
NC_007606.1	RefSeq	CDS	2874125	2874655	.	+	0	ID=cds2686;Parent=gene3033;Dbxref=Genbank:YP_404604.1,GeneID:3799745;Name=YP_404604.1;gbkey=CDS;gene=gspH;product=type II secretion protein;protein_id=YP_404604.1;transl_table=11
NC_007606.1	RefSeq	gene	2874652	2875023	.	+	.	ID=gene3034;Dbxref=GeneID:3799746;Name=gspI;Note=SDY3098;gbkey=Gene;gene=gspI;gene_biotype=protein_coding;locus_tag=SDY_3098
NC_007606.1	RefSeq	CDS	2874652	2875023	.	+	0	ID=cds2687;Parent=gene3034;Dbxref=Genbank:YP_404605.1,GeneID:3799746;Name=YP_404605.1;Note=Code: NU%3B COG: COG2165;gbkey=CDS;gene=gspI;product=type II secretion protein;protein_id=YP_404605.1;transl_table=11
NC_007606.1	RefSeq	gene	2875056	2875625	.	+	.	ID=gene3035;Dbxref=GeneID:3799747;Name=gspJ;Note=SDY3099;gbkey=Gene;gene=gspJ;gene_biotype=protein_coding;locus_tag=SDY_3099
NC_007606.1	RefSeq	CDS	2875056	2875625	.	+	0	ID=cds2688;Parent=gene3035;Dbxref=Genbank:YP_404606.1,GeneID:3799747;Name=YP_404606.1;Note=Code: U%3B COG: COG4795;gbkey=CDS;gene=gspJ;product=type II secretion protein;protein_id=YP_404606.1;transl_table=11
NC_007606.1	RefSeq	gene	2875622	2876599	.	+	.	ID=gene3036;Dbxref=GeneID:3799035;Name=gspK;Note=SDY3100;gbkey=Gene;gene=gspK;gene_biotype=protein_coding;locus_tag=SDY_3100
NC_007606.1	RefSeq	CDS	2875622	2876599	.	+	0	ID=cds2689;Parent=gene3036;Dbxref=Genbank:YP_404607.1,GeneID:3799035;Name=YP_404607.1;Note=Code: U%3B COG: COG3156;gbkey=CDS;gene=gspK;product=type II secretion protein;protein_id=YP_404607.1;transl_table=11
NC_007606.1	RefSeq	gene	2876914	2877774	.	+	.	ID=gene3037;Dbxref=GeneID:3799036;Name=gspL;Note=SDY3101;gbkey=Gene;gene=gspL;gene_biotype=protein_coding;locus_tag=SDY_3101
NC_007606.1	RefSeq	CDS	2876914	2877774	.	+	0	ID=cds2690;Parent=gene3037;Dbxref=Genbank:YP_404608.1,GeneID:3799036;Name=YP_404608.1;Note=similar to general secretory pathway protein L;gbkey=CDS;gene=gspL;product=GspL-like protein;protein_id=YP_404608.1;transl_table=11
NC_007606.1	RefSeq	gene	2877776	2878312	.	+	.	ID=gene3038;Dbxref=GeneID:3799037;Name=gspM;Note=SDY3102;gbkey=Gene;gene=gspM;gene_biotype=pseudogene;locus_tag=SDY_3102;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2878460	2878535	.	-	.	ID=gene3039;Dbxref=GeneID:3799038;Name=SDY_3103;Note=SDY3103;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3103
NC_007606.1	RefSeq	tRNA	2878460	2878535	.	-	.	ID=rna58;Parent=gene3039;Dbxref=GeneID:3799038;codons=1;gbkey=tRNA;product=tRNA-Phe
NC_007606.1	RefSeq	exon	2878460	2878535	.	-	.	ID=id498;Parent=rna58;Dbxref=GeneID:3799038;codons=1;gbkey=tRNA;product=tRNA-Phe
NC_007606.1	RefSeq	region	2879057	2879824	.	+	.	ID=id499;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2879112	2879387	.	+	.	ID=gene3040;Dbxref=GeneID:3799039;Name=insA;Note=SDY3104;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3104
NC_007606.1	RefSeq	CDS	2879112	2879387	.	+	0	ID=cds2691;Parent=gene3040;Dbxref=Genbank:YP_404610.1,GeneID:3799039;Name=YP_404610.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404610.1;transl_table=11
NC_007606.1	RefSeq	gene	2879432	2879809	.	+	.	ID=gene3041;Dbxref=GeneID:3799040;Name=insB;Note=SDY3105;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3105
NC_007606.1	RefSeq	CDS	2879432	2879809	.	+	0	ID=cds2692;Parent=gene3041;Dbxref=Genbank:YP_404611.1,GeneID:3799040;Name=YP_404611.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404611.1;transl_table=11
NC_007606.1	RefSeq	gene	2880516	2882651	.	+	.	ID=gene3042;Dbxref=GeneID:3799042;Name=speC;Note=SDY3107;gbkey=Gene;gene=speC;gene_biotype=protein_coding;locus_tag=SDY_3107
NC_007606.1	RefSeq	CDS	2880516	2882651	.	+	0	ID=cds2693;Parent=gene3042;Dbxref=Genbank:YP_404612.1,GeneID:3799042;Name=YP_404612.1;Note=Code: E%3B COG: COG1982;gbkey=CDS;gene=speC;product=ornithine decarboxylase;protein_id=YP_404612.1;transl_table=11
NC_007606.1	RefSeq	gene	2882701	2884005	.	-	.	ID=gene3043;Dbxref=GeneID:3799043;Name=nupG;Note=SDY3108;gbkey=Gene;gene=nupG;gene_biotype=protein_coding;locus_tag=SDY_3108
NC_007606.1	RefSeq	CDS	2882701	2884005	.	-	0	ID=cds2694;Parent=gene3043;Dbxref=Genbank:YP_404613.1,GeneID:3799043;Name=YP_404613.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=nupG;product=nucleosides transporter;protein_id=YP_404613.1;transl_table=11
NC_007606.1	RefSeq	gene	2884159	2885241	.	-	.	ID=gene3044;Dbxref=GeneID:3799044;Name=mltC;Note=SDY3109;gbkey=Gene;gene=mltC;gene_biotype=protein_coding;locus_tag=SDY_3109
NC_007606.1	RefSeq	CDS	2884159	2885241	.	-	0	ID=cds2695;Parent=gene3044;Dbxref=Genbank:YP_404614.1,GeneID:3799044;Name=YP_404614.1;Note=''Murein hydrolase C%3B membrane-bound%3B lytic%3B catalyzes the cleavage of the beta-1%2C4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues'';gbkey=CDS;gene=mltC;product=murein transglycosylase C;protein_id=YP_404614.1;transl_table=11
NC_007606.1	RefSeq	gene	2885303	2885578	.	-	.	ID=gene3045;Dbxref=GeneID:3799045;Name=yggX;Note=SDY3110;gbkey=Gene;gene=yggX;gene_biotype=protein_coding;locus_tag=SDY_3110
NC_007606.1	RefSeq	CDS	2885303	2885578	.	-	0	ID=cds2696;Parent=gene3045;Dbxref=Genbank:YP_404615.1,GeneID:3799045;Name=YP_404615.1;Note=Code: CO%3B COG: COG2924;gbkey=CDS;gene=yggX;product=hypothetical protein;protein_id=YP_404615.1;transl_table=11
NC_007606.1	RefSeq	gene	2885606	2886658	.	-	.	ID=gene3046;Dbxref=GeneID:3799046;Name=mutY;Note=SDY3111;gbkey=Gene;gene=mutY;gene_biotype=protein_coding;locus_tag=SDY_3111
NC_007606.1	RefSeq	CDS	2885606	2886658	.	-	0	ID=cds2697;Parent=gene3046;Dbxref=Genbank:YP_404616.1,GeneID:3799046;Name=YP_404616.1;Note=Code: L%3B COG: COG1194;gbkey=CDS;gene=mutY;product=adenine DNA glycosylase;protein_id=YP_404616.1;transl_table=11
NC_007606.1	RefSeq	gene	2886819	2887538	.	+	.	ID=gene3047;Dbxref=GeneID:3799047;Name=trmB;Note=SDY3112;gbkey=Gene;gene=trmB;gene_biotype=protein_coding;gene_synonym=yggH;locus_tag=SDY_3112
NC_007606.1	RefSeq	CDS	2886819	2887538	.	+	0	ID=cds2698;Parent=gene3047;Dbxref=Genbank:YP_404617.1,GeneID:3799047;Name=YP_404617.1;Note=tRNA (guanine-N(7)-)-methyltransferase%3B catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine;gbkey=CDS;gene=trmB;product=tRNA (guanine-N(7)-)-methyltransferase;protein_id=YP_404617.1;transl_table=11
NC_007606.1	RefSeq	gene	2887538	2887864	.	+	.	ID=gene3048;Dbxref=GeneID:3799048;Name=yggL;Note=SDY3113;gbkey=Gene;gene=yggL;gene_biotype=protein_coding;locus_tag=SDY_3113
NC_007606.1	RefSeq	CDS	2887538	2887864	.	+	0	ID=cds2699;Parent=gene3048;Dbxref=Genbank:YP_404618.2,GeneID:3799048;Name=YP_404618.2;Note=Code: S%3B COG: COG3171;gbkey=CDS;gene=yggL;product=hypothetical protein;protein_id=YP_404618.2;transl_table=11
NC_007606.1	RefSeq	gene	2888048	2888767	.	+	.	ID=gene3049;Dbxref=GeneID:3799049;Name=yggN;Note=SDY3114;gbkey=Gene;gene=yggN;gene_biotype=protein_coding;locus_tag=SDY_3114
NC_007606.1	RefSeq	CDS	2888048	2888767	.	+	0	ID=cds2700;Parent=gene3049;Dbxref=Genbank:YP_404619.1,GeneID:3799049;Name=YP_404619.1;gbkey=CDS;gene=yggN;product=hypothetical protein;protein_id=YP_404619.1;transl_table=11
NC_007606.1	RefSeq	gene	2888943	2889989	.	+	.	ID=gene3050;Dbxref=GeneID:3799050;Name=ansB;Note=SDY3115;gbkey=Gene;gene=ansB;gene_biotype=protein_coding;locus_tag=SDY_3115
NC_007606.1	RefSeq	CDS	2888943	2889989	.	+	0	ID=cds2701;Parent=gene3050;Dbxref=Genbank:YP_404620.1,GeneID:3799050;Name=YP_404620.1;Note=''catalyzes the formation of aspartate from asparagine%2C periplasmic%3B regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis'';gbkey=CDS;gene=ansB;product=L-asparaginase II;protein_id=YP_404620.1;transl_table=11
NC_007606.1	RefSeq	gene	2890106	2891113	.	+	.	ID=gene3051;Dbxref=GeneID:3799051;Name=yggM;Note=SDY3116;gbkey=Gene;gene=yggM;gene_biotype=protein_coding;locus_tag=SDY_3116
NC_007606.1	RefSeq	CDS	2890106	2891113	.	+	0	ID=cds2702;Parent=gene3051;Dbxref=Genbank:YP_404621.1,GeneID:3799051;Name=YP_404621.1;gbkey=CDS;gene=yggM;product=alpha helix chain;protein_id=YP_404621.1;transl_table=11
NC_007606.1	RefSeq	gene	2891265	2892401	.	-	.	ID=gene3052;Dbxref=GeneID:3799052;Name=yggW;Note=SDY3117;gbkey=Gene;gene=yggW;gene_biotype=protein_coding;locus_tag=SDY_3117
NC_007606.1	RefSeq	CDS	2891265	2892401	.	-	0	ID=cds2703;Parent=gene3052;Dbxref=Genbank:YP_404622.1,GeneID:3799052;Name=YP_404622.1;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;gene=yggW;product=coproporphyrinogen III oxidase;protein_id=YP_404622.1;transl_table=11
NC_007606.1	RefSeq	gene	2892394	2892987	.	-	.	ID=gene3053;Dbxref=GeneID:3799053;Name=yggV;Note=SDY3118;gbkey=Gene;gene=yggV;gene_biotype=protein_coding;locus_tag=SDY_3118
NC_007606.1	RefSeq	CDS	2892394	2892987	.	-	0	ID=cds2704;Parent=gene3053;Dbxref=Genbank:YP_404623.1,GeneID:3799053;Name=YP_404623.1;Note=HAM1-like protein%3B Rec-dependent growth%3B RgdB%3B yggV%3B it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine;gbkey=CDS;gene=yggV;product=deoxyribonucleotide triphosphate pyrophosphatase;protein_id=YP_404623.1;transl_table=11
NC_007606.1	RefSeq	gene	2892995	2893285	.	-	.	ID=gene3054;Dbxref=GeneID:3798997;Name=yggU;Note=SDY3119;gbkey=Gene;gene=yggU;gene_biotype=protein_coding;locus_tag=SDY_3119
NC_007606.1	RefSeq	CDS	2892995	2893285	.	-	0	ID=cds2705;Parent=gene3054;Dbxref=Genbank:YP_404624.2,GeneID:3798997;Name=YP_404624.2;Note=Code: S%3B COG: COG1872;gbkey=CDS;gene=yggU;product=hypothetical protein;protein_id=YP_404624.2;transl_table=11
NC_007606.1	RefSeq	gene	2893282	2893848	.	-	.	ID=gene3055;Dbxref=GeneID:3798998;Name=yggT;Note=SDY3120;gbkey=Gene;gene=yggT;gene_biotype=protein_coding;locus_tag=SDY_3120
NC_007606.1	RefSeq	CDS	2893282	2893848	.	-	0	ID=cds2706;Parent=gene3055;Dbxref=Genbank:YP_404625.1,GeneID:3798998;Name=YP_404625.1;Note=Code: S%3B COG: COG0762;gbkey=CDS;gene=yggT;product=resistance protein;protein_id=YP_404625.1;transl_table=11
NC_007606.1	RefSeq	gene	2893866	2894570	.	-	.	ID=gene3056;Dbxref=GeneID:3799000;Name=yggS;Note=SDY3122;gbkey=Gene;gene=yggS;gene_biotype=protein_coding;locus_tag=SDY_3122
NC_007606.1	RefSeq	CDS	2893866	2894570	.	-	0	ID=cds2707;Parent=gene3056;Dbxref=Genbank:YP_404626.1,GeneID:3799000;Name=YP_404626.1;Note=Code: R%3B COG: COG0325;gbkey=CDS;gene=yggS;product=hypothetical protein;protein_id=YP_404626.1;transl_table=11
NC_007606.1	RefSeq	gene	2894543	2895568	.	+	.	ID=gene3057;Dbxref=GeneID:3798999;Name=yggR;Note=SDY3121;gbkey=Gene;gene=yggR;gene_biotype=protein_coding;locus_tag=SDY_3121
NC_007606.1	RefSeq	CDS	2894543	2895568	.	+	0	ID=cds2708;Parent=gene3057;Dbxref=Genbank:YP_404627.1,GeneID:3798999;Name=YP_404627.1;Note=Code: NU%3B COG: COG2805;gbkey=CDS;gene=yggR;product=pilus retraction ATPase PilT;protein_id=YP_404627.1;transl_table=11
NC_007606.1	RefSeq	gene	2895757	2896173	.	-	.	ID=gene3058;Dbxref=GeneID:3799001;Name=yqgF;Note=SDY3123;gbkey=Gene;gene=yqgF;gene_biotype=protein_coding;locus_tag=SDY_3123
NC_007606.1	RefSeq	CDS	2895757	2896173	.	-	0	ID=cds2709;Parent=gene3058;Dbxref=Genbank:YP_404628.1,GeneID:3799001;Name=YP_404628.1;Note=similar to RuvC resolvase with substantial differences%3B NMR structural information suggests this protein is monomeric%3B unknown cellular function;gbkey=CDS;gene=yqgF;product=Holliday junction resolvase-like protein;protein_id=YP_404628.1;transl_table=11
NC_007606.1	RefSeq	gene	2896173	2896736	.	-	.	ID=gene3059;Dbxref=GeneID:3799002;Name=yqgE;Note=SDY3124;gbkey=Gene;gene=yqgE;gene_biotype=protein_coding;locus_tag=SDY_3124
NC_007606.1	RefSeq	CDS	2896173	2896736	.	-	0	ID=cds2710;Parent=gene3059;Dbxref=Genbank:YP_404629.2,GeneID:3799002;Name=YP_404629.2;Note=Code: K%3B COG: COG1678;gbkey=CDS;gene=yqgE;product=hypothetical protein;protein_id=YP_404629.2;transl_table=11
NC_007606.1	RefSeq	gene	2896845	2897795	.	-	.	ID=gene3060;Dbxref=GeneID:3799003;Name=gshB;Note=SDY3125;gbkey=Gene;gene=gshB;gene_biotype=protein_coding;locus_tag=SDY_3125
NC_007606.1	RefSeq	CDS	2896845	2897795	.	-	0	ID=cds2711;Parent=gene3060;Dbxref=Genbank:YP_404630.1,GeneID:3799003;Name=YP_404630.1;Note=''The second step in the glutathione biosynthesis pathway%2C where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine %3D ADP + phosphate + glutathione'';gbkey=CDS;gene=gshB;product=glutathione synthetase;protein_id=YP_404630.1;transl_table=11
NC_007606.1	RefSeq	gene	2897808	2898539	.	-	.	ID=gene3061;Dbxref=GeneID:3799004;Name=yggJ;Note=SDY3126;gbkey=Gene;gene=yggJ;gene_biotype=protein_coding;locus_tag=SDY_3126
NC_007606.1	RefSeq	CDS	2897808	2898539	.	-	0	ID=cds2712;Parent=gene3061;Dbxref=Genbank:YP_404631.2,GeneID:3799004;Name=YP_404631.2;Note=''in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA%3B cells lacking this function can grow%2C but are outcompeted by wild-type%3B SAM-dependent m(3)U1498 methyltransferase'';gbkey=CDS;gene=yggJ;product=16S ribosomal RNA methyltransferase RsmE;protein_id=YP_404631.2;transl_table=11
NC_007606.1	RefSeq	gene	2898619	2899326	.	-	.	ID=gene3062;Dbxref=GeneID:3799005;Name=endA;Note=SDY3127;gbkey=Gene;gene=endA;gene_biotype=protein_coding;locus_tag=SDY_3127
NC_007606.1	RefSeq	CDS	2898619	2899326	.	-	0	ID=cds2713;Parent=gene3062;Dbxref=Genbank:YP_404632.1,GeneID:3799005;Name=YP_404632.1;Note=Code: L%3B COG: COG2356;gbkey=CDS;gene=endA;product=DNA-specific endonuclease I;protein_id=YP_404632.1;transl_table=11
NC_007606.1	RefSeq	gene	2899421	2899918	.	-	.	ID=gene3063;Dbxref=GeneID:3799006;Name=sprT;Note=SDY3128;gbkey=Gene;gene=sprT;gene_biotype=protein_coding;locus_tag=SDY_3128
NC_007606.1	RefSeq	CDS	2899421	2899918	.	-	0	ID=cds2714;Parent=gene3063;Dbxref=Genbank:YP_404633.1,GeneID:3799006;Name=YP_404633.1;Note=Code: S%3B COG: COG3091;gbkey=CDS;gene=sprT;product=hypothetical protein;protein_id=YP_404633.1;transl_table=11
NC_007606.1	RefSeq	gene	2899995	2901389	.	-	.	ID=gene3064;Dbxref=GeneID:3799007;Name=galP;Note=SDY3129;gbkey=Gene;gene=galP;gene_biotype=protein_coding;locus_tag=SDY_3129
NC_007606.1	RefSeq	CDS	2899995	2901389	.	-	0	ID=cds2715;Parent=gene3064;Dbxref=Genbank:YP_404634.1,GeneID:3799007;Name=YP_404634.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=galP;product=galactose-proton symporter;protein_id=YP_404634.1;transl_table=11
NC_007606.1	RefSeq	gene	2901826	2902980	.	-	.	ID=gene3065;Dbxref=GeneID:3799008;Name=metK;Note=SDY3130;gbkey=Gene;gene=metK;gene_biotype=protein_coding;locus_tag=SDY_3130
NC_007606.1	RefSeq	CDS	2901826	2902980	.	-	0	ID=cds2716;Parent=gene3065;Dbxref=Genbank:YP_404635.1,GeneID:3799008;Name=YP_404635.1;Note=catalyzes the formation of S-adenosylmethionine from methionine and ATP%3B methionine adenosyltransferase;gbkey=CDS;gene=metK;product=S-adenosylmethionine synthetase;protein_id=YP_404635.1;transl_table=11
NC_007606.1	RefSeq	gene	2903036	2903287	.	+	.	ID=gene3066;Dbxref=GeneID:3799009;Name=yqgD;Note=SDY3131;gbkey=Gene;gene=yqgD;gene_biotype=protein_coding;locus_tag=SDY_3131
NC_007606.1	RefSeq	CDS	2903036	2903287	.	+	0	ID=cds2717;Parent=gene3066;Dbxref=Genbank:YP_404636.1,GeneID:3799009;Name=YP_404636.1;gbkey=CDS;gene=yqgD;product=hypothetical protein;protein_id=YP_404636.1;transl_table=11
NC_007606.1	RefSeq	gene	2903284	2903499	.	-	.	ID=gene3067;Dbxref=GeneID:3799010;Name=yqgC;Note=SDY3132;gbkey=Gene;gene=yqgC;gene_biotype=protein_coding;locus_tag=SDY_3132
NC_007606.1	RefSeq	CDS	2903284	2903499	.	-	0	ID=cds2718;Parent=gene3067;Dbxref=Genbank:YP_404637.1,GeneID:3799010;Name=YP_404637.1;gbkey=CDS;gene=yqgC;product=hypothetical protein;protein_id=YP_404637.1;transl_table=11
NC_007606.1	RefSeq	gene	2903620	2903766	.	+	.	ID=gene3068;Dbxref=GeneID:3799011;Name=yqgB;Note=SDY3133;gbkey=Gene;gene=yqgB;gene_biotype=protein_coding;locus_tag=SDY_3133
NC_007606.1	RefSeq	CDS	2903620	2903766	.	+	0	ID=cds2719;Parent=gene3068;Dbxref=Genbank:YP_404638.1,GeneID:3799011;Name=YP_404638.1;gbkey=CDS;gene=yqgB;product=hypothetical protein;protein_id=YP_404638.1;transl_table=11
NC_007606.1	RefSeq	gene	2903775	2905751	.	+	.	ID=gene3069;Dbxref=GeneID:3799012;Name=speA;Note=SDY3134;gbkey=Gene;gene=speA;gene_biotype=protein_coding;locus_tag=SDY_3134
NC_007606.1	RefSeq	CDS	2903775	2905751	.	+	0	ID=cds2720;Parent=gene3069;Dbxref=Genbank:YP_404639.1,GeneID:3799012;Name=YP_404639.1;Note=catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis;gbkey=CDS;gene=speA;product=arginine decarboxylase;protein_id=YP_404639.1;transl_table=11
NC_007606.1	RefSeq	gene	2905897	2906169	.	+	.	ID=gene3070;Dbxref=GeneID:3799013;Name=SDY_3135;Note=SDY3135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3135
NC_007606.1	RefSeq	CDS	2905897	2906169	.	+	0	ID=cds2721;Parent=gene3070;Dbxref=Genbank:YP_404640.1,GeneID:3799013;Name=YP_404640.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404640.1;transl_table=11
NC_007606.1	RefSeq	region	2906152	2906917	.	+	.	ID=id500;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2906209	2906481	.	+	.	ID=gene3071;Dbxref=GeneID:18263127;Name=SDY_4738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4738
NC_007606.1	RefSeq	CDS	2906209	2906481	.	+	0	ID=cds2722;Parent=gene3071;Dbxref=Genbank:YP_009000813.1,GeneID:18263127;Name=YP_009000813.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000813.1;transl_table=11
NC_007606.1	RefSeq	gene	2906508	2906903	.	+	.	ID=gene3072;Dbxref=GeneID:3799015;Name=SDY_3137;Note=SDY3137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3137
NC_007606.1	RefSeq	CDS	2906508	2906903	.	+	0	ID=cds2723;Parent=gene3072;Dbxref=Genbank:YP_404642.1,GeneID:3799015;Name=YP_404642.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404642.1;transl_table=11
NC_007606.1	RefSeq	gene	2907035	2907409	.	+	.	ID=gene3073;Dbxref=GeneID:3795388;Name=SDY_3138;Note=SDY3138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3138
NC_007606.1	RefSeq	CDS	2907035	2907409	.	+	0	ID=cds2724;Parent=gene3073;Dbxref=Genbank:YP_404643.1,GeneID:3795388;Name=YP_404643.1;gbkey=CDS;product=lipoprotein;protein_id=YP_404643.1;transl_table=11
NC_007606.1	RefSeq	gene	2907545	2908465	.	+	.	ID=gene3074;Dbxref=GeneID:3795389;Name=speB;Note=SDY3139;gbkey=Gene;gene=speB;gene_biotype=protein_coding;locus_tag=SDY_3139
NC_007606.1	RefSeq	CDS	2907545	2908465	.	+	0	ID=cds2725;Parent=gene3074;Dbxref=Genbank:YP_404644.1,GeneID:3795389;Name=YP_404644.1;Note=catalyzes the formation of putrescine from agmatine;gbkey=CDS;gene=speB;product=agmatinase;protein_id=YP_404644.1;transl_table=11
NC_007606.1	RefSeq	gene	2908513	2909271	.	-	.	ID=gene3075;Dbxref=GeneID:3795390;Name=yggG;Note=SDY3140;gbkey=Gene;gene=yggG;gene_biotype=protein_coding;locus_tag=SDY_3140
NC_007606.1	RefSeq	CDS	2908513	2909271	.	-	0	ID=cds2726;Parent=gene3075;Dbxref=Genbank:YP_404645.1,GeneID:3795390;Name=YP_404645.1;Note=Code: O%3B COG: COG0501;gbkey=CDS;gene=yggG;product=hypothetical protein;protein_id=YP_404645.1;transl_table=11
NC_007606.1	RefSeq	gene	2909549	2911540	.	+	.	ID=gene3076;Dbxref=GeneID:3795391;Name=tktA;Note=SDY3141;gbkey=Gene;gene=tktA;gene_biotype=protein_coding;locus_tag=SDY_3141
NC_007606.1	RefSeq	CDS	2909549	2911540	.	+	0	ID=cds2727;Parent=gene3076;Dbxref=Genbank:YP_404646.1,GeneID:3795391;Name=YP_404646.1;Note=''catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate%3B can transfer ketol groups between several groups%3B in Escherichia coli there are two tkt genes%2C tktA expressed during exponential growth and the tktB during stationary phase'';gbkey=CDS;gene=tktA;product=transketolase;protein_id=YP_404646.1;transl_table=11
NC_007606.1	RefSeq	region	2911842	2912617	.	-	.	ID=id501;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2911856	2912251	.	-	.	ID=gene3077;Dbxref=GeneID:3795392;Name=SDY_3142;Note=SDY3142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3142
NC_007606.1	RefSeq	CDS	2911856	2912251	.	-	0	ID=cds2728;Parent=gene3077;Dbxref=Genbank:YP_404647.1,GeneID:3795392;Name=YP_404647.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404647.1;transl_table=11
NC_007606.1	RefSeq	gene	2912278	2912550	.	-	.	ID=gene3078;Dbxref=GeneID:18263128;Name=SDY_4739;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4739
NC_007606.1	RefSeq	CDS	2912278	2912550	.	-	0	ID=cds2729;Parent=gene3078;Dbxref=Genbank:YP_009000814.1,GeneID:18263128;Name=YP_009000814.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000814.1;transl_table=11
NC_007606.1	RefSeq	gene	2912628	2913071	.	+	.	ID=gene3079;Dbxref=GeneID:3795393;Name=cmtB;Note=SDY3143;gbkey=Gene;gene=cmtB;gene_biotype=protein_coding;locus_tag=SDY_3143
NC_007606.1	RefSeq	CDS	2912628	2913071	.	+	0	ID=cds2730;Parent=gene3079;Dbxref=Genbank:YP_404648.1,GeneID:3795393;Name=YP_404648.1;Note=''TolM%3B with CmtA (IIBC)%2C CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system%2C which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli%3B cytoplasmic protein'';gbkey=CDS;gene=cmtB;product=PTS system mannitol transporter subunit IIA;protein_id=YP_404648.1;transl_table=11
NC_007606.1	RefSeq	gene	2913099	2914487	.	+	.	ID=gene3080;Dbxref=GeneID:3795394;Name=cmtA;Note=SDY3144;gbkey=Gene;gene=cmtA;gene_biotype=protein_coding;locus_tag=SDY_3144
NC_007606.1	RefSeq	CDS	2913099	2914487	.	+	0	ID=cds2731;Parent=gene3080;Dbxref=Genbank:YP_404649.1,GeneID:3795394;Name=YP_404649.1;Note=Code: G%3B COG: COG2213;gbkey=CDS;gene=cmtA;product=cryptic PTS system mannitol-specific transporter subunit IIBC;protein_id=YP_404649.1;transl_table=11
NC_007606.1	RefSeq	gene	2914502	2915779	.	+	.	ID=gene3081;Dbxref=GeneID:3795395;Name=SDY_3145;Note=SDY3145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3145
NC_007606.1	RefSeq	CDS	2914502	2915779	.	+	0	ID=cds2732;Parent=gene3081;Dbxref=Genbank:YP_404650.2,GeneID:3795395;Name=YP_404650.2;Note=Code: ER%3B COG: COG1063;gbkey=CDS;product=oxidoreductase;protein_id=YP_404650.2;transl_table=11
NC_007606.1	RefSeq	gene	2915776	2916741	.	+	.	ID=gene3082;Dbxref=GeneID:3795396;Name=yggF;Note=''SDY3146%3B contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yggF;gene_biotype=pseudogene;locus_tag=SDY_3146;pseudo=true
NC_007606.1	RefSeq	gene	2916763	2917272	.	+	.	ID=gene3083;Dbxref=GeneID:3795397;Name=yggD;Note=SDY3147;gbkey=Gene;gene=yggD;gene_biotype=protein_coding;locus_tag=SDY_3147
NC_007606.1	RefSeq	CDS	2916763	2917272	.	+	0	ID=cds2733;Parent=gene3083;Dbxref=Genbank:YP_404651.1,GeneID:3795397;Name=YP_404651.1;Note=Code: K%3B COG: COG3722;gbkey=CDS;gene=yggD;product=DNA-binding transcriptional regulator;protein_id=YP_404651.1;transl_table=11
NC_007606.1	RefSeq	gene	2917269	2917982	.	+	.	ID=gene3084;Dbxref=GeneID:3795398;Name=frcK;Note=SDY3148;gbkey=Gene;gene=frcK;gene_biotype=protein_coding;locus_tag=SDY_3148
NC_007606.1	RefSeq	CDS	2917269	2917982	.	+	0	ID=cds2734;Parent=gene3084;Dbxref=Genbank:YP_404652.1,GeneID:3795398;Name=YP_404652.1;Note=Code: H%3B COG: COG1072;gbkey=CDS;gene=frcK;product=fructose transport system kinase;protein_id=YP_404652.1;transl_table=11
NC_007606.1	RefSeq	gene	2917954	2918631	.	-	.	ID=gene3085;Dbxref=GeneID:3795399;Name=SDY_3149;Note=SDY3149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3149
NC_007606.1	RefSeq	CDS	2917954	2918631	.	-	0	ID=cds2735;Parent=gene3085;Dbxref=Genbank:YP_404653.1,GeneID:3795399;Name=YP_404653.1;Note=Code: P%3B COG: COG1118;gbkey=CDS;product=ABC transporter ATP-binding protein;protein_id=YP_404653.1;transl_table=11
NC_007606.1	RefSeq	gene	2918625	2919302	.	-	.	ID=gene3086;Dbxref=GeneID:3795400;Name=SDY_3150;Note=SDY3150;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3150;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2919290	2919997	.	-	.	ID=gene3087;Dbxref=GeneID:3795402;Name=SDY_3152;Note=SDY3152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3152;pseudogene=unknown
NC_007606.1	RefSeq	CDS	2919290	2919997	.	-	0	ID=cds2736;Parent=gene3087;Dbxref=Genbank:YP_404656.1,GeneID:3795402;Name=YP_404656.1;Note=Code: P%3B COG: COG0619;gbkey=CDS;product=hypothetical protein;protein_id=YP_404656.1;transl_table=11
NC_007606.1	RefSeq	gene	2919998	2920576	.	-	.	ID=gene3088;Dbxref=GeneID:3795403;Name=SDY_3153;Note=SDY3153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3153
NC_007606.1	RefSeq	CDS	2919998	2920576	.	-	0	ID=cds2737;Parent=gene3088;Dbxref=Genbank:YP_404657.1,GeneID:3795403;Name=YP_404657.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404657.1;transl_table=11
NC_007606.1	RefSeq	gene	2920599	2921030	.	-	.	ID=gene3089;Dbxref=GeneID:3795404;Name=SDY_3154;Note=SDY3154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3154
NC_007606.1	RefSeq	CDS	2920599	2921030	.	-	0	ID=cds2738;Parent=gene3089;Dbxref=Genbank:YP_404658.1,GeneID:3795404;Name=YP_404658.1;Note=Code: R%3B COG: COG1661;gbkey=CDS;product=hypothetical protein;protein_id=YP_404658.1;transl_table=11
NC_007606.1	RefSeq	gene	2921402	2922421	.	+	.	ID=gene3090;Dbxref=GeneID:3795405;Name=epd;Note=SDY3155;gbkey=Gene;gene=epd;gene_biotype=protein_coding;locus_tag=SDY_3155
NC_007606.1	RefSeq	CDS	2921402	2922421	.	+	0	ID=cds2739;Parent=gene3090;Dbxref=Genbank:YP_404659.1,GeneID:3795405;Name=YP_404659.1;Note=NAD-dependent%3B catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate;gbkey=CDS;gene=epd;product=erythrose 4-phosphate dehydrogenase;protein_id=YP_404659.1;transl_table=11
NC_007606.1	RefSeq	gene	2922471	2923634	.	+	.	ID=gene3091;Dbxref=GeneID:3795406;Name=pgk;Note=SDY3156;gbkey=Gene;gene=pgk;gene_biotype=protein_coding;locus_tag=SDY_3156
NC_007606.1	RefSeq	CDS	2922471	2923634	.	+	0	ID=cds2740;Parent=gene3091;Dbxref=Genbank:YP_404660.1,GeneID:3795406;Name=YP_404660.1;Note=Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway;gbkey=CDS;gene=pgk;product=phosphoglycerate kinase;protein_id=YP_404660.1;transl_table=11
NC_007606.1	RefSeq	gene	2923849	2924928	.	+	.	ID=gene3092;Dbxref=GeneID:3795407;Name=fba;Note=SDY3157;gbkey=Gene;gene=fba;gene_biotype=protein_coding;locus_tag=SDY_3157
NC_007606.1	RefSeq	CDS	2923849	2924928	.	+	0	ID=cds2741;Parent=gene3092;Dbxref=Genbank:YP_404661.1,GeneID:3795407;Name=YP_404661.1;Note=''catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1%2C6%2C bisphosphate'';gbkey=CDS;gene=fba;product=fructose-bisphosphate aldolase;protein_id=YP_404661.1;transl_table=11
NC_007606.1	RefSeq	gene	2925119	2925979	.	+	.	ID=gene3093;Dbxref=GeneID:3795558;Name=yggB;Note=SDY3158;gbkey=Gene;gene=yggB;gene_biotype=protein_coding;locus_tag=SDY_3158
NC_007606.1	RefSeq	CDS	2925119	2925979	.	+	0	ID=cds2742;Parent=gene3093;Dbxref=Genbank:YP_404662.1,GeneID:3795558;Name=YP_404662.1;Note=participates in the regulation of osmotic pressure changes within the cel;gbkey=CDS;gene=yggB;product=mechanosensitive ion channel MscS;protein_id=YP_404662.1;transl_table=11
NC_007606.1	RefSeq	gene	2926118	2926753	.	+	.	ID=gene3094;Dbxref=GeneID:3795559;Name=yggA;Note=SDY3159;gbkey=Gene;gene=yggA;gene_biotype=protein_coding;locus_tag=SDY_3159
NC_007606.1	RefSeq	CDS	2926118	2926753	.	+	0	ID=cds2743;Parent=gene3094;Dbxref=Genbank:YP_404663.1,GeneID:3795559;Name=YP_404663.1;Note=Involved in the export of arginine;gbkey=CDS;gene=yggA;product=arginine exporter protein;protein_id=YP_404663.1;transl_table=11
NC_007606.1	RefSeq	gene	2926846	2927586	.	+	.	ID=gene3095;Dbxref=GeneID:3795560;Name=yggE;Note=SDY3160;gbkey=Gene;gene=yggE;gene_biotype=protein_coding;locus_tag=SDY_3160
NC_007606.1	RefSeq	CDS	2926846	2927586	.	+	0	ID=cds2744;Parent=gene3095;Dbxref=Genbank:YP_404664.1,GeneID:3795560;Name=YP_404664.1;Note=Code: S%3B COG: COG2968;gbkey=CDS;gene=yggE;product=hypothetical protein;protein_id=YP_404664.1;transl_table=11
NC_007606.1	RefSeq	region	2927778	2928543	.	+	.	ID=id502;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2927835	2928107	.	+	.	ID=gene3096;Dbxref=GeneID:18263129;Name=SDY_4740;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4740
NC_007606.1	RefSeq	CDS	2927835	2928107	.	+	0	ID=cds2745;Parent=gene3096;Dbxref=Genbank:YP_009000815.1,GeneID:18263129;Name=YP_009000815.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000815.1;transl_table=11
NC_007606.1	RefSeq	gene	2928134	2928529	.	+	.	ID=gene3097;Dbxref=GeneID:3795562;Name=SDY_3162;Note=SDY3162;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3162
NC_007606.1	RefSeq	CDS	2928134	2928529	.	+	0	ID=cds2746;Parent=gene3097;Dbxref=Genbank:YP_404666.1,GeneID:3795562;Name=YP_404666.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404666.1;transl_table=11
NC_007606.1	RefSeq	gene	2928650	2929645	.	-	.	ID=gene3098;Dbxref=GeneID:3795563;Name=ygfD;Note=SDY3163;gbkey=Gene;gene=ygfD;gene_biotype=pseudogene;locus_tag=SDY_3163;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2929638	2931782	.	-	.	ID=gene3099;Dbxref=GeneID:3795564;Name=sbm;Note=SDY3164%3B contains in-frame stop codon%3B original product: methylmalonyl-CoA mutase (MCM);gbkey=Gene;gene=sbm;gene_biotype=pseudogene;locus_tag=SDY_3164;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	2931985	2932878	.	-	.	ID=gene3100;Dbxref=GeneID:3795565;Name=iciA;Note=SDY3165;gbkey=Gene;gene=iciA;gene_biotype=protein_coding;locus_tag=SDY_3165
NC_007606.1	RefSeq	CDS	2931985	2932878	.	-	0	ID=cds2747;Parent=gene3100;Dbxref=Genbank:YP_404668.1,GeneID:3795565;Name=YP_404668.1;Note=specific inhibitor of chromosomal initiation of replication in vitro%3B binds the three 13-mers in the origin (oriC) to block initiation of replication%3B also controls genes involved in arginine transport;gbkey=CDS;gene=iciA;product=chromosome replication initiation inhibitor protein;protein_id=YP_404668.1;transl_table=11
NC_007606.1	RefSeq	region	2932976	2933741	.	-	.	ID=id503;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2932990	2933385	.	-	.	ID=gene3101;Dbxref=GeneID:3795566;Name=SDY_3166;Note=SDY3166;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3166
NC_007606.1	RefSeq	CDS	2932990	2933385	.	-	0	ID=cds2748;Parent=gene3101;Dbxref=Genbank:YP_404669.1,GeneID:3795566;Name=YP_404669.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404669.1;transl_table=11
NC_007606.1	RefSeq	gene	2933412	2933684	.	-	.	ID=gene3102;Dbxref=GeneID:18263130;Name=SDY_4741;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4741
NC_007606.1	RefSeq	CDS	2933412	2933684	.	-	0	ID=cds2749;Parent=gene3102;Dbxref=Genbank:YP_009000816.1,GeneID:18263130;Name=YP_009000816.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000816.1;transl_table=11
NC_007606.1	RefSeq	gene	2934073	2934732	.	+	.	ID=gene3103;Dbxref=GeneID:3795568;Name=rpiA;Note=SDY3168;gbkey=Gene;gene=rpiA;gene_biotype=protein_coding;locus_tag=SDY_3168
NC_007606.1	RefSeq	CDS	2934073	2934732	.	+	0	ID=cds2750;Parent=gene3103;Dbxref=Genbank:YP_404671.1,GeneID:3795568;Name=YP_404671.1;Note=Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway;gbkey=CDS;gene=rpiA;product=ribose-5-phosphate isomerase A;protein_id=YP_404671.1;transl_table=11
NC_007606.1	RefSeq	gene	2934988	2936220	.	+	.	ID=gene3104;Dbxref=GeneID:3795569;Name=serA;Note=SDY3169;gbkey=Gene;gene=serA;gene_biotype=protein_coding;locus_tag=SDY_3169
NC_007606.1	RefSeq	CDS	2934988	2936220	.	+	0	ID=cds2751;Parent=gene3104;Dbxref=Genbank:YP_404672.1,GeneID:3795569;Name=YP_404672.1;Note=catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis%3B can also reduce alpha ketoglutarate to form 2-hydroxyglutarate;gbkey=CDS;gene=serA;product=D-3-phosphoglycerate dehydrogenase;protein_id=YP_404672.1;transl_table=11
NC_007606.1	RefSeq	gene	2936601	2937149	.	-	.	ID=gene3105;Dbxref=GeneID:3795570;Name=ygfA;Note=SDY3170;gbkey=Gene;gene=ygfA;gene_biotype=protein_coding;locus_tag=SDY_3170
NC_007606.1	RefSeq	CDS	2936601	2937149	.	-	0	ID=cds2752;Parent=gene3105;Dbxref=Genbank:YP_404673.1,GeneID:3795570;Name=YP_404673.1;Note=ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms%3B unknown function;gbkey=CDS;gene=ygfA;product=ligase;protein_id=YP_404673.1;transl_table=11
NC_007606.1	RefSeq	gene	2937449	2937778	.	-	.	ID=gene3106;Dbxref=GeneID:3795571;Name=ygfE;Note=SDY3171;gbkey=Gene;gene=ygfE;gene_biotype=protein_coding;locus_tag=SDY_3171
NC_007606.1	RefSeq	CDS	2937449	2937778	.	-	0	ID=cds2753;Parent=gene3106;Dbxref=Genbank:YP_404674.1,GeneID:3795571;Name=YP_404674.1;Note=Code: S%3B COG: COG3027;gbkey=CDS;gene=ygfE;product=Z-ring-associated protein;protein_id=YP_404674.1;transl_table=11
NC_007606.1	RefSeq	gene	2937946	2938524	.	+	.	ID=gene3107;Dbxref=GeneID:3795572;Name=ygfB;Note=SDY3172;gbkey=Gene;gene=ygfB;gene_biotype=protein_coding;locus_tag=SDY_3172
NC_007606.1	RefSeq	CDS	2937946	2938524	.	+	0	ID=cds2754;Parent=gene3107;Dbxref=Genbank:YP_404675.2,GeneID:3795572;Name=YP_404675.2;Note=the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers%3B function unknown;gbkey=CDS;gene=ygfB;product=hypothetical protein;protein_id=YP_404675.2;transl_table=11
NC_007606.1	RefSeq	gene	2938550	2939875	.	+	.	ID=gene3108;Dbxref=GeneID:3795573;Name=pepP;Note=SDY3173;gbkey=Gene;gene=pepP;gene_biotype=protein_coding;locus_tag=SDY_3173
NC_007606.1	RefSeq	CDS	2938550	2939875	.	+	0	ID=cds2755;Parent=gene3108;Dbxref=Genbank:YP_404676.1,GeneID:3795573;Name=YP_404676.1;Note=exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue%3B substrate can be as short as a dipeptide;gbkey=CDS;gene=pepP;product=proline aminopeptidase P II;protein_id=YP_404676.1;transl_table=11
NC_007606.1	RefSeq	gene	2939872	2941050	.	+	.	ID=gene3109;Dbxref=GeneID:3795574;Name=ubiH;Note=SDY3174;gbkey=Gene;gene=ubiH;gene_biotype=protein_coding;locus_tag=SDY_3174
NC_007606.1	RefSeq	CDS	2939872	2941050	.	+	0	ID=cds2756;Parent=gene3109;Dbxref=Genbank:YP_404677.1,GeneID:3795574;Name=YP_404677.1;Note=''Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1%2C4-benzoquinone'';gbkey=CDS;gene=ubiH;product=2-octaprenyl-6-methoxyphenyl hydroxylase;protein_id=YP_404677.1;transl_table=11
NC_007606.1	RefSeq	gene	2941073	2942275	.	+	.	ID=gene3110;Dbxref=GeneID:3795575;Name=visC;Note=SDY3175;gbkey=Gene;gene=visC;gene_biotype=protein_coding;locus_tag=SDY_3175
NC_007606.1	RefSeq	CDS	2941073	2942275	.	+	0	ID=cds2757;Parent=gene3110;Dbxref=Genbank:YP_404678.1,GeneID:3795575;Name=YP_404678.1;Note=Code: HC%3B COG: COG0654;gbkey=CDS;gene=visC;product=hypothetical protein;protein_id=YP_404678.1;transl_table=11
NC_007606.1	RefSeq	gene	2942723	2943817	.	+	.	ID=gene3111;Dbxref=GeneID:3795576;Name=gcvT;Note=SDY3176;gbkey=Gene;gene=gcvT;gene_biotype=protein_coding;locus_tag=SDY_3176
NC_007606.1	RefSeq	CDS	2942723	2943817	.	+	0	ID=cds2758;Parent=gene3111;Dbxref=Genbank:YP_404679.1,GeneID:3795576;Name=YP_404679.1;Note=''catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate%2C causing the release of ammonia and the generation of reduced GcvH protein'';gbkey=CDS;gene=gcvT;product=glycine cleavage system aminomethyltransferase T;protein_id=YP_404679.1;transl_table=11
NC_007606.1	RefSeq	gene	2943841	2944230	.	+	.	ID=gene3112;Dbxref=GeneID:3796002;Name=gcvH;Note=SDY3177;gbkey=Gene;gene=gcvH;gene_biotype=protein_coding;locus_tag=SDY_3177
NC_007606.1	RefSeq	CDS	2943841	2944230	.	+	0	ID=cds2759;Parent=gene3112;Dbxref=Genbank:YP_404680.1,GeneID:3796002;Name=YP_404680.1;Note=''part of multienzyme complex composed of H%2C L%2C P%2C and T proteins which catalyzes oxidation of glycine to yield carbon dioxide%2C ammonia%2C 5%2C10-CH2-H4folate and a reduced pyridine nucleotide%3B protein H is involved in transfer of methylamine group from the P to T protein%3B covalently bound to a lipoyl cofactor'';gbkey=CDS;gene=gcvH;product=glycine cleavage system protein H;protein_id=YP_404680.1;transl_table=11
NC_007606.1	RefSeq	gene	2944348	2947221	.	+	.	ID=gene3113;Dbxref=GeneID:3796003;Name=gcvP;Note=SDY3178;gbkey=Gene;gene=gcvP;gene_biotype=protein_coding;locus_tag=SDY_3178
NC_007606.1	RefSeq	CDS	2944348	2947221	.	+	0	ID=cds2760;Parent=gene3113;Dbxref=Genbank:YP_404681.1,GeneID:3796003;Name=YP_404681.1;Note=acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine;gbkey=CDS;gene=gcvP;product=glycine dehydrogenase;protein_id=YP_404681.1;transl_table=11
NC_007606.1	RefSeq	gene	2947434	2948230	.	+	.	ID=gene3114;Dbxref=GeneID:3796004;Name=ygfF;Note=SDY3179%3B frameshift%3B original product:  oxidoreductase;gbkey=Gene;gene=ygfF;gene_biotype=pseudogene;locus_tag=SDY_3179;pseudo=true
NC_007606.1	RefSeq	gene	2948287	2949726	.	-	.	ID=gene3115;Dbxref=GeneID:3796005;Name=bglA;Note=SDY3180%3B contains in-frame stop codon%3B original product: 6-phospho-beta-glucosidase A%3B cryptic;gbkey=Gene;gene=bglA;gene_biotype=pseudogene;locus_tag=SDY_3180;pseudo=true
NC_007606.1	RefSeq	gene	2949765	2950076	.	+	.	ID=gene3116;Dbxref=GeneID:3796006;Name=yqfB;Note=SDY3181;gbkey=Gene;gene=yqfB;gene_biotype=protein_coding;locus_tag=SDY_3181
NC_007606.1	RefSeq	CDS	2949765	2950076	.	+	0	ID=cds2761;Parent=gene3116;Dbxref=Genbank:YP_404682.1,GeneID:3796006;Name=YP_404682.1;Note=Code: S%3B COG: COG3097;gbkey=CDS;gene=yqfB;product=hypothetical protein;protein_id=YP_404682.1;transl_table=11
NC_007606.1	RefSeq	region	2950311	2951076	.	-	.	ID=id504;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2950325	2950720	.	-	.	ID=gene3117;Dbxref=GeneID:3796007;Name=SDY_3182;Note=SDY3182;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3182
NC_007606.1	RefSeq	CDS	2950325	2950720	.	-	0	ID=cds2762;Parent=gene3117;Dbxref=Genbank:YP_404683.1,GeneID:3796007;Name=YP_404683.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404683.1;transl_table=11
NC_007606.1	RefSeq	gene	2950747	2951019	.	-	.	ID=gene3118;Dbxref=GeneID:18263131;Name=SDY_4742;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4742
NC_007606.1	RefSeq	CDS	2950747	2951019	.	-	0	ID=cds2763;Parent=gene3118;Dbxref=Genbank:YP_009000817.1,GeneID:18263131;Name=YP_009000817.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000817.1;transl_table=11
NC_007606.1	RefSeq	gene	2950999	2951673	.	+	.	ID=gene3119;Dbxref=GeneID:3796008;Name=SDY_3183;Note=SDY3183;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3183
NC_007606.1	RefSeq	CDS	2950999	2951673	.	+	0	ID=cds2764;Parent=gene3119;Dbxref=Genbank:YP_404684.1,GeneID:3796008;Name=YP_404684.1;Note=Code: R%3B COG: COG1272;gbkey=CDS;product=oxidoreductase;protein_id=YP_404684.1;transl_table=11
NC_007606.1	RefSeq	gene	2951750	2952730	.	-	.	ID=gene3120;Dbxref=GeneID:3796009;Name=ygfZ;Note=SDY3184;gbkey=Gene;gene=ygfZ;gene_biotype=protein_coding;locus_tag=SDY_3184
NC_007606.1	RefSeq	CDS	2951750	2952730	.	-	0	ID=cds2765;Parent=gene3120;Dbxref=Genbank:YP_404685.1,GeneID:3796009;Name=YP_404685.1;Note=physiological role is not clear%3B not essential for growth but mutants grow poorly%3B mutations suppress hda null mutations%3B may be involved in regulation of ATP-DnaA levels%3B may also be involved in regulation of tRNA modifications%3B can bind folic acid and tetrahydrofolate%3B forms a three domain ring-like structure with a central channel%3B structurally similar to DMGO protein from A. globiformis%3B shows sequence similarity to yeast CAF17 transcriptional regulator;gbkey=CDS;gene=ygfZ;product=global regulator;protein_id=YP_404685.1;transl_table=11
NC_007606.1	RefSeq	gene	2952973	2953239	.	+	.	ID=gene3121;Dbxref=GeneID:3796010;Name=ygfY;Note=SDY3185;gbkey=Gene;gene=ygfY;gene_biotype=protein_coding;locus_tag=SDY_3185
NC_007606.1	RefSeq	CDS	2952973	2953239	.	+	0	ID=cds2766;Parent=gene3121;Dbxref=Genbank:YP_404686.1,GeneID:3796010;Name=YP_404686.1;Note=Code: S%3B COG: COG2938;gbkey=CDS;gene=ygfY;product=hypothetical protein;protein_id=YP_404686.1;transl_table=11
NC_007606.1	RefSeq	gene	2953220	2953627	.	+	.	ID=gene3122;Dbxref=GeneID:3796011;Name=SDY_3186;Note=SDY3186;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3186
NC_007606.1	RefSeq	CDS	2953220	2953627	.	+	0	ID=cds2767;Parent=gene3122;Dbxref=Genbank:YP_404687.1,GeneID:3796011;Name=YP_404687.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404687.1;transl_table=11
NC_007606.1	RefSeq	gene	2953667	2954188	.	-	.	ID=gene3123;Dbxref=GeneID:3796012;Name=fldB;Note=SDY3187;gbkey=Gene;gene=fldB;gene_biotype=protein_coding;locus_tag=SDY_3187
NC_007606.1	RefSeq	CDS	2953667	2954188	.	-	0	ID=cds2768;Parent=gene3123;Dbxref=Genbank:YP_404688.1,GeneID:3796012;Name=YP_404688.1;Note=''An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic'';gbkey=CDS;gene=fldB;product=flavodoxin FldB;protein_id=YP_404688.1;transl_table=11
NC_007606.1	RefSeq	gene	2954300	2955196	.	+	.	ID=gene3124;Dbxref=GeneID:3796013;Name=xerD;Note=SDY3188;gbkey=Gene;gene=xerD;gene_biotype=protein_coding;locus_tag=SDY_3188
NC_007606.1	RefSeq	CDS	2954300	2955196	.	+	0	ID=cds2769;Parent=gene3124;Dbxref=Genbank:YP_404689.1,GeneID:3796013;Name=YP_404689.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B XerD specifically exchanges the bottom strands%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerD;product=site-specific tyrosine recombinase XerD;protein_id=YP_404689.1;transl_table=11
NC_007606.1	RefSeq	gene	2955221	2955931	.	+	.	ID=gene3125;Dbxref=GeneID:3796014;Name=dsbC;Note=SDY3189;gbkey=Gene;gene=dsbC;gene_biotype=protein_coding;locus_tag=SDY_3189
NC_007606.1	RefSeq	CDS	2955221	2955931	.	+	0	ID=cds2770;Parent=gene3125;Dbxref=Genbank:YP_404690.1,GeneID:3796014;Name=YP_404690.1;Note=DsbC%3B periplasmic protein with protein disulfide isomerase activity%3B this protein also shows disulfide oxidoreductase activity;gbkey=CDS;gene=dsbC;product=thiol:disulfide interchange protein DsbC;protein_id=YP_404690.1;transl_table=11
NC_007606.1	RefSeq	gene	2955937	2957670	.	+	.	ID=gene3126;Dbxref=GeneID:3796015;Name=recJ;Note=SDY3190;gbkey=Gene;gene=recJ;gene_biotype=protein_coding;locus_tag=SDY_3190
NC_007606.1	RefSeq	CDS	2955937	2957670	.	+	0	ID=cds2771;Parent=gene3126;Dbxref=Genbank:YP_404691.1,GeneID:3796015;Name=YP_404691.1;Note=5'-3' single-stranded-DNA-specific exonuclease;gbkey=CDS;gene=recJ;product=ssDNA exonuclease RecJ;protein_id=YP_404691.1;transl_table=11
NC_007606.1	RefSeq	gene	2957978	2958859	.	+	.	ID=gene3127;Dbxref=GeneID:3796016;Name=prfB;Note=SDY3191;gbkey=Gene;gene=prfB;gene_biotype=protein_coding;locus_tag=SDY_3191
NC_007606.1	RefSeq	CDS	2957978	2958859	.	+	0	ID=cds2772;Parent=gene3127;Dbxref=Genbank:YP_404692.1,GeneID:3796016;Name=YP_404692.1;Note=Code: J%3B COG: COG1186;gbkey=CDS;gene=prfB;product=peptide chain release factor 2;protein_id=YP_404692.1;transl_table=11
NC_007606.1	RefSeq	gene	2958869	2960386	.	+	.	ID=gene3128;Dbxref=GeneID:3796017;Name=lysS;Note=SDY3192;gbkey=Gene;gene=lysS;gene_biotype=protein_coding;locus_tag=SDY_3192
NC_007606.1	RefSeq	CDS	2958869	2960386	.	+	0	ID=cds2773;Parent=gene3128;Dbxref=Genbank:YP_404693.1,GeneID:3796017;Name=YP_404693.1;Note=''class II%3B LysRS2%3B catalyzes a two-step reaction%2C first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA%3B in Methanosarcina barkeri%2C LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1'';gbkey=CDS;gene=lysS;product=lysyl-tRNA synthetase;protein_id=YP_404693.1;transl_table=11
NC_007606.1	RefSeq	gene	2960429	2960977	.	-	.	ID=gene3129;Dbxref=GeneID:3796018;Name=SDY_3193;Note=SDY3193;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3193
NC_007606.1	RefSeq	CDS	2960429	2960977	.	-	0	ID=cds2774;Parent=gene3129;Dbxref=Genbank:YP_404694.1,GeneID:3796018;Name=YP_404694.1;Note=catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate;gbkey=CDS;product=isopentenyl-diphosphate delta-isomerase;protein_id=YP_404694.1;transl_table=11
NC_007606.1	RefSeq	region	2961136	2961656	.	+	.	ID=id505;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2961191	2961466	.	+	.	ID=gene3130;Dbxref=GeneID:3796019;Name=insA;Note=SDY3194;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3194
NC_007606.1	RefSeq	CDS	2961191	2961466	.	+	0	ID=cds2775;Parent=gene3130;Dbxref=Genbank:YP_404695.1,GeneID:3796019;Name=YP_404695.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404695.1;transl_table=11
NC_007606.1	RefSeq	region	2961660	2962925	.	+	.	ID=id506;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2961724	2962026	.	+	.	ID=gene3131;Dbxref=GeneID:3796020;Name=SDY_3195;Note=SDY3195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3195
NC_007606.1	RefSeq	CDS	2961724	2962026	.	+	0	ID=cds2776;Parent=gene3131;Dbxref=Genbank:YP_404696.1,GeneID:3796020;Name=YP_404696.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_404696.1;transl_table=11
NC_007606.1	RefSeq	gene	2962167	2962934	.	+	.	ID=gene3132;Dbxref=GeneID:3796021;Name=SDY_3196;Note=SDY3196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3196
NC_007606.1	RefSeq	CDS	2962167	2962934	.	+	0	ID=cds2777;Parent=gene3132;Dbxref=Genbank:YP_404697.1,GeneID:3796021;Name=YP_404697.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_404697.1;transl_table=11
NC_007606.1	RefSeq	region	2962928	2963172	.	+	.	ID=id507;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	2963376	2964138	.	+	.	ID=id508;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2963433	2963705	.	+	.	ID=gene3133;Dbxref=GeneID:18263132;Name=SDY_4743;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4743
NC_007606.1	RefSeq	CDS	2963433	2963705	.	+	0	ID=cds2778;Parent=gene3133;Dbxref=Genbank:YP_009000818.1,GeneID:18263132;Name=YP_009000818.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000818.1;transl_table=11
NC_007606.1	RefSeq	gene	2963732	2964127	.	+	.	ID=gene3134;Dbxref=GeneID:3798449;Name=SDY_3199;Note=SDY3199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3199
NC_007606.1	RefSeq	CDS	2963732	2964127	.	+	0	ID=cds2779;Parent=gene3134;Dbxref=Genbank:YP_404700.1,GeneID:3798449;Name=YP_404700.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404700.1;transl_table=11
NC_007606.1	RefSeq	gene	2964216	2964989	.	-	.	ID=gene3135;Dbxref=GeneID:3798450;Name=ygiE;Note=SDY3200;gbkey=Gene;gene=ygiE;gene_biotype=protein_coding;locus_tag=SDY_3200
NC_007606.1	RefSeq	CDS	2964216	2964989	.	-	0	ID=cds2780;Parent=gene3135;Dbxref=Genbank:YP_404701.1,GeneID:3798450;Name=YP_404701.1;Note=Code: P%3B COG: COG0428;gbkey=CDS;gene=ygiE;product=zinc transporter ZupT;protein_id=YP_404701.1;transl_table=11
NC_007606.1	RefSeq	gene	2965105	2966004	.	+	.	ID=gene3136;Dbxref=GeneID:3798451;Name=ygiD;Note=''SDY3201%3B contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=ygiD;gene_biotype=pseudogene;locus_tag=SDY_3201;pseudo=true
NC_007606.1	RefSeq	gene	2965958	2967118	.	-	.	ID=gene3137;Dbxref=GeneID:3798452;Name=ygiC;Note=SDY3202;gbkey=Gene;gene=ygiC;gene_biotype=protein_coding;locus_tag=SDY_3202
NC_007606.1	RefSeq	CDS	2965958	2967118	.	-	0	ID=cds2781;Parent=gene3137;Dbxref=Genbank:YP_404702.1,GeneID:3798452;Name=YP_404702.1;Note=Code: E%3B COG: COG0754;gbkey=CDS;gene=ygiC;product=synthetase/amidase;protein_id=YP_404702.1;transl_table=11
NC_007606.1	RefSeq	gene	2967124	2967795	.	-	.	ID=gene3138;Dbxref=GeneID:3798453;Name=ygiB;Note=SDY3203;gbkey=Gene;gene=ygiB;gene_biotype=protein_coding;locus_tag=SDY_3203
NC_007606.1	RefSeq	CDS	2967124	2967795	.	-	0	ID=cds2782;Parent=gene3138;Dbxref=Genbank:YP_404703.2,GeneID:3798453;Name=YP_404703.2;Note=Code: S%3B COG: COG5463;gbkey=CDS;gene=ygiB;product=hypothetical protein;protein_id=YP_404703.2;transl_table=11
NC_007606.1	RefSeq	gene	2967683	2967943	.	-	.	ID=gene3139;Dbxref=GeneID:3798454;Name=ygiA;Note=SDY3204;gbkey=Gene;gene=ygiA;gene_biotype=protein_coding;locus_tag=SDY_3204
NC_007606.1	RefSeq	CDS	2967683	2967943	.	-	0	ID=cds2783;Parent=gene3139;Dbxref=Genbank:YP_404704.1,GeneID:3798454;Name=YP_404704.1;gbkey=CDS;gene=ygiA;product=hypothetical protein;protein_id=YP_404704.1;transl_table=11
NC_007606.1	RefSeq	gene	2967943	2969424	.	-	.	ID=gene3140;Dbxref=GeneID:3798455;Name=tolC;Note=SDY3205;gbkey=Gene;gene=tolC;gene_biotype=protein_coding;locus_tag=SDY_3205
NC_007606.1	RefSeq	CDS	2967943	2969424	.	-	0	ID=cds2784;Parent=gene3140;Dbxref=Genbank:YP_404705.2,GeneID:3798455;Name=YP_404705.2;Note=trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules%3B functions with a number of efflux systems in the inner membrane to transport molecules out of the cell;gbkey=CDS;gene=tolC;product=outer membrane channel protein;protein_id=YP_404705.2;transl_table=11
NC_007606.1	RefSeq	gene	2969629	2970258	.	+	.	ID=gene3141;Dbxref=GeneID:3798456;Name=nudF;Note=SDY3206;gbkey=Gene;gene=nudF;gene_biotype=protein_coding;locus_tag=SDY_3206
NC_007606.1	RefSeq	CDS	2969629	2970258	.	+	0	ID=cds2785;Parent=gene3141;Dbxref=Genbank:YP_404706.1,GeneID:3798456;Name=YP_404706.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudF;product=ADP-ribose pyrophosphatase;protein_id=YP_404706.1;transl_table=11
NC_007606.1	RefSeq	gene	2970259	2970681	.	+	.	ID=gene3142;Dbxref=GeneID:3798457;Name=yqiB;Note=SDY3207;gbkey=Gene;gene=yqiB;gene_biotype=protein_coding;locus_tag=SDY_3207
NC_007606.1	RefSeq	CDS	2970259	2970681	.	+	0	ID=cds2786;Parent=gene3142;Dbxref=Genbank:YP_404707.1,GeneID:3798457;Name=YP_404707.1;Note=Code: S%3B COG: COG3151;gbkey=CDS;gene=yqiB;product=hypothetical protein;protein_id=YP_404707.1;transl_table=11
NC_007606.1	RefSeq	gene	2970706	2971533	.	+	.	ID=gene3143;Dbxref=GeneID:3798458;Name=icc;Note=SDY3208;gbkey=Gene;gene=icc;gene_biotype=protein_coding;locus_tag=SDY_3208
NC_007606.1	RefSeq	CDS	2970706	2971533	.	+	0	ID=cds2787;Parent=gene3143;Dbxref=Genbank:YP_404708.1,GeneID:3798458;Name=YP_404708.1;Note=Code: R%3B COG: COG1409;gbkey=CDS;gene=icc;product=cyclic 3'%2C5'-adenosine monophosphate phosphodiesterase;protein_id=YP_404708.1;transl_table=11
NC_007606.1	RefSeq	gene	2971533	2972114	.	+	.	ID=gene3144;Dbxref=GeneID:3798459;Name=yqiA;Note=SDY3209;gbkey=Gene;gene=yqiA;gene_biotype=protein_coding;locus_tag=SDY_3209
NC_007606.1	RefSeq	CDS	2971533	2972114	.	+	0	ID=cds2788;Parent=gene3144;Dbxref=Genbank:YP_404709.1,GeneID:3798459;Name=YP_404709.1;Note=Displays esterase activity toward palmitoyl-CoA and pNP-butyrate;gbkey=CDS;gene=yqiA;product=esterase;protein_id=YP_404709.1;transl_table=11
NC_007606.1	RefSeq	gene	2972143	2974035	.	+	.	ID=gene3145;Dbxref=GeneID:3798460;Name=parE;Note=SDY3210;gbkey=Gene;gene=parE;gene_biotype=protein_coding;locus_tag=SDY_3210
NC_007606.1	RefSeq	CDS	2972143	2974035	.	+	0	ID=cds2789;Parent=gene3145;Dbxref=Genbank:YP_404710.1,GeneID:3798460;Name=YP_404710.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;gene=parE;product=DNA topoisomerase IV subunit B;protein_id=YP_404710.1;transl_table=11
NC_007606.1	RefSeq	gene	2974083	2974397	.	-	.	ID=gene3146;Dbxref=GeneID:3798461;Name=ygiN;Note=SDY3211;gbkey=Gene;gene=ygiN;gene_biotype=protein_coding;locus_tag=SDY_3211
NC_007606.1	RefSeq	CDS	2974083	2974397	.	-	0	ID=cds2790;Parent=gene3146;Dbxref=Genbank:YP_404711.1,GeneID:3798461;Name=YP_404711.1;Note=Code: S%3B COG: COG1359;gbkey=CDS;gene=ygiN;product=hypothetical protein;protein_id=YP_404711.1;transl_table=11
NC_007606.1	RefSeq	gene	2974428	2975009	.	-	.	ID=gene3147;Dbxref=GeneID:3798462;Name=mdaB;Note=SDY3212;gbkey=Gene;gene=mdaB;gene_biotype=protein_coding;locus_tag=SDY_3212
NC_007606.1	RefSeq	CDS	2974428	2975009	.	-	0	ID=cds2791;Parent=gene3147;Dbxref=Genbank:YP_404712.1,GeneID:3798462;Name=YP_404712.1;Note=Code: R%3B COG: COG2249;gbkey=CDS;gene=mdaB;product=modulator of drug activity B;protein_id=YP_404712.1;transl_table=11
NC_007606.1	RefSeq	gene	2975119	2976468	.	-	.	ID=gene3148;Dbxref=GeneID:3798463;Name=qseC;Note=SDY3213;gbkey=Gene;gene=qseC;gene_biotype=protein_coding;locus_tag=SDY_3213
NC_007606.1	RefSeq	CDS	2975119	2976468	.	-	0	ID=cds2792;Parent=gene3148;Dbxref=Genbank:YP_404713.1,GeneID:3798463;Name=YP_404713.1;Note=Code: T%3B COG: COG0642;gbkey=CDS;gene=qseC;product=sensor protein QseC;protein_id=YP_404713.1;transl_table=11
NC_007606.1	RefSeq	gene	2976465	2977124	.	-	.	ID=gene3149;Dbxref=GeneID:3798464;Name=ygiX;Note=SDY3214;gbkey=Gene;gene=ygiX;gene_biotype=protein_coding;locus_tag=SDY_3214
NC_007606.1	RefSeq	CDS	2976465	2977124	.	-	0	ID=cds2793;Parent=gene3149;Dbxref=Genbank:YP_404714.1,GeneID:3798464;Name=YP_404714.1;Note=response regulator in two-component regulatory system with QseC%3B regulates FlhCD which is the master regulator for flagella and motility genes;gbkey=CDS;gene=ygiX;product=DNA-binding transcriptional regulator QseB;protein_id=YP_404714.1;transl_table=11
NC_007606.1	RefSeq	gene	2977276	2977668	.	+	.	ID=gene3150;Dbxref=GeneID:3798465;Name=ygiW;Note=SDY3215;gbkey=Gene;gene=ygiW;gene_biotype=protein_coding;locus_tag=SDY_3215
NC_007606.1	RefSeq	CDS	2977276	2977668	.	+	0	ID=cds2794;Parent=gene3150;Dbxref=Genbank:YP_404715.1,GeneID:3798465;Name=YP_404715.1;Note=Code: S%3B COG: COG3111;gbkey=CDS;gene=ygiW;product=hypothetical protein;protein_id=YP_404715.1;transl_table=11
NC_007606.1	RefSeq	gene	2977721	2978203	.	+	.	ID=gene3151;Dbxref=GeneID:3798427;Name=SDY_3216;Note=SDY3216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3216
NC_007606.1	RefSeq	CDS	2977721	2978203	.	+	0	ID=cds2795;Parent=gene3151;Dbxref=Genbank:YP_404716.1,GeneID:3798427;Name=YP_404716.1;Note=Code: L%3B COG: COG3449;gbkey=CDS;product=hypothetical protein;protein_id=YP_404716.1;transl_table=11
NC_007606.1	RefSeq	gene	2978312	2979919	.	+	.	ID=gene3152;Dbxref=GeneID:3798428;Name=SDY_3217;Note=SDY3217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3217
NC_007606.1	RefSeq	CDS	2978312	2979919	.	+	0	ID=cds2796;Parent=gene3152;Dbxref=Genbank:YP_404717.1,GeneID:3798428;Name=YP_404717.1;Note=YgiS%3B uncharacterized periplasmic protein that seems to be part of a binding-protein-dependent transport system;gbkey=CDS;product=binding protein;protein_id=YP_404717.1;transl_table=11
NC_007606.1	RefSeq	gene	2980057	2982315	.	+	.	ID=gene3153;Dbxref=GeneID:3798429;Name=parC;Note=SDY3218;gbkey=Gene;gene=parC;gene_biotype=protein_coding;locus_tag=SDY_3218
NC_007606.1	RefSeq	CDS	2980057	2982315	.	+	0	ID=cds2797;Parent=gene3153;Dbxref=Genbank:YP_404718.1,GeneID:3798429;Name=YP_404718.1;Note=decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling;gbkey=CDS;gene=parC;product=DNA topoisomerase IV subunit A;protein_id=YP_404718.1;transl_table=11
NC_007606.1	RefSeq	gene	2982549	2983286	.	+	.	ID=gene3154;Dbxref=GeneID:3798430;Name=plsC;Note=SDY3219;gbkey=Gene;gene=plsC;gene_biotype=protein_coding;locus_tag=SDY_3219
NC_007606.1	RefSeq	CDS	2982549	2983286	.	+	0	ID=cds2798;Parent=gene3154;Dbxref=Genbank:YP_404719.1,GeneID:3798430;Name=YP_404719.1;Note=Code: I%3B COG: COG0204;gbkey=CDS;gene=plsC;product=1-acyl-sn-glycerol-3-phosphate acyltransferase;protein_id=YP_404719.1;transl_table=11
NC_007606.1	RefSeq	gene	2983361	2984773	.	+	.	ID=gene3155;Dbxref=GeneID:3798431;Name=sufI;Note=SDY3220;gbkey=Gene;gene=sufI;gene_biotype=protein_coding;locus_tag=SDY_3220
NC_007606.1	RefSeq	CDS	2983361	2984773	.	+	0	ID=cds2799;Parent=gene3155;Dbxref=Genbank:YP_404720.1,GeneID:3798431;Name=YP_404720.1;Note=Code: Q%3B COG: COG2132;gbkey=CDS;gene=sufI;product=FtsI repressor;protein_id=YP_404720.1;transl_table=11
NC_007606.1	RefSeq	gene	2984884	2987005	.	+	.	ID=gene3156;Dbxref=GeneID:3798432;Name=ygiRQ;Note=SDY3221%3B frameshift%3B original product: Fe-S oxidoreductase;gbkey=Gene;gene=ygiRQ;gene_biotype=pseudogene;locus_tag=SDY_3221;pseudo=true
NC_007606.1	RefSeq	gene	2987147	2987404	.	-	.	ID=gene3157;Dbxref=GeneID:3798433;Name=yqhH;Note=SDY3222;gbkey=Gene;gene=yqhH;gene_biotype=protein_coding;locus_tag=SDY_3222
NC_007606.1	RefSeq	CDS	2987147	2987404	.	-	0	ID=cds2800;Parent=gene3157;Dbxref=Genbank:YP_404721.1,GeneID:3798433;Name=YP_404721.1;Note=Code: M%3B COG: COG4238;gbkey=CDS;gene=yqhH;product=outer membrane lipoprotein;protein_id=YP_404721.1;transl_table=11
NC_007606.1	RefSeq	gene	2987453	2988052	.	-	.	ID=gene3158;Dbxref=GeneID:3798434;Name=SDY_3223;Note=SDY3223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3223
NC_007606.1	RefSeq	CDS	2987453	2988052	.	-	0	ID=cds2801;Parent=gene3158;Dbxref=Genbank:YP_404722.1,GeneID:3798434;Name=YP_404722.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404722.1;transl_table=11
NC_007606.1	RefSeq	region	2988098	2988865	.	-	.	ID=id509;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2988113	2988490	.	-	.	ID=gene3159;Dbxref=GeneID:3798435;Name=insB;Note=SDY3224;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3224
NC_007606.1	RefSeq	CDS	2988113	2988490	.	-	0	ID=cds2802;Parent=gene3159;Dbxref=Genbank:YP_404723.1,GeneID:3798435;Name=YP_404723.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404723.1;transl_table=11
NC_007606.1	RefSeq	gene	2988535	2988810	.	-	.	ID=gene3160;Dbxref=GeneID:3798436;Name=insA;Note=SDY3225;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3225
NC_007606.1	RefSeq	CDS	2988535	2988810	.	-	0	ID=cds2803;Parent=gene3160;Dbxref=Genbank:YP_404724.1,GeneID:3798436;Name=YP_404724.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404724.1;transl_table=11
NC_007606.1	RefSeq	gene	2989128	2989781	.	-	.	ID=gene3161;Dbxref=GeneID:3798437;Name=ribB;Note=SDY3226;gbkey=Gene;gene=ribB;gene_biotype=protein_coding;locus_tag=SDY_3226
NC_007606.1	RefSeq	CDS	2989128	2989781	.	-	0	ID=cds2804;Parent=gene3161;Dbxref=Genbank:YP_404725.1,GeneID:3798437;Name=YP_404725.1;Note=DHBP synthase%3B functions during riboflavin biosynthesis;gbkey=CDS;gene=ribB;product=3%2C4-dihydroxy-2-butanone 4-phosphate synthase;protein_id=YP_404725.1;transl_table=11
NC_007606.1	RefSeq	gene	2990095	2990454	.	+	.	ID=gene3162;Dbxref=GeneID:3798438;Name=SDY_3227;Note=SDY3227;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3227
NC_007606.1	RefSeq	CDS	2990095	2990454	.	+	0	ID=cds2805;Parent=gene3162;Dbxref=Genbank:YP_404726.1,GeneID:3798438;Name=YP_404726.1;Note=Code: S%3B COG: COG2960;gbkey=CDS;product=hypothetical protein;protein_id=YP_404726.1;transl_table=11
NC_007606.1	RefSeq	gene	2990489	2990689	.	-	.	ID=gene3163;Dbxref=GeneID:3798439;Name=glgS;Note=SDY3228;gbkey=Gene;gene=glgS;gene_biotype=protein_coding;locus_tag=SDY_3228
NC_007606.1	RefSeq	CDS	2990489	2990689	.	-	0	ID=cds2806;Parent=gene3163;Dbxref=Genbank:YP_404727.1,GeneID:3798439;Name=YP_404727.1;Note=Involved in glycogen synthesis. May be involved in glycogen priming;gbkey=CDS;gene=glgS;product=glycogen synthesis protein GlgS;protein_id=YP_404727.1;transl_table=11
NC_007606.1	RefSeq	region	2990692	2991457	.	-	.	ID=id510;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2990706	2991101	.	-	.	ID=gene3164;Dbxref=GeneID:3798440;Name=SDY_3229;Note=SDY3229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3229
NC_007606.1	RefSeq	CDS	2990706	2991101	.	-	0	ID=cds2807;Parent=gene3164;Dbxref=Genbank:YP_404728.1,GeneID:3798440;Name=YP_404728.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404728.1;transl_table=11
NC_007606.1	RefSeq	gene	2991128	2991400	.	-	.	ID=gene3165;Dbxref=GeneID:18263133;Name=SDY_4744;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4744
NC_007606.1	RefSeq	CDS	2991128	2991400	.	-	0	ID=cds2808;Parent=gene3165;Dbxref=Genbank:YP_009000819.1,GeneID:18263133;Name=YP_009000819.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000819.1;transl_table=11
NC_007606.1	RefSeq	region	2991606	2992373	.	-	.	ID=id511;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2991621	2991998	.	-	.	ID=gene3166;Dbxref=GeneID:3798441;Name=insB;Note=SDY3230;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3230
NC_007606.1	RefSeq	CDS	2991621	2991998	.	-	0	ID=cds2809;Parent=gene3166;Dbxref=Genbank:YP_404729.1,GeneID:3798441;Name=YP_404729.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404729.1;transl_table=11
NC_007606.1	RefSeq	gene	2992043	2992318	.	-	.	ID=gene3167;Dbxref=GeneID:3798442;Name=insA;Note=SDY3231;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3231
NC_007606.1	RefSeq	CDS	2992043	2992318	.	-	0	ID=cds2810;Parent=gene3167;Dbxref=Genbank:YP_404730.1,GeneID:3798442;Name=YP_404730.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404730.1;transl_table=11
NC_007606.1	RefSeq	region	2992472	2993237	.	+	.	ID=id512;gbkey=mobile_element
NC_007606.1	RefSeq	gene	2992529	2992801	.	+	.	ID=gene3168;Dbxref=GeneID:18263134;Name=SDY_4745;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4745
NC_007606.1	RefSeq	CDS	2992529	2992801	.	+	0	ID=cds2811;Parent=gene3168;Dbxref=Genbank:YP_009000820.1,GeneID:18263134;Name=YP_009000820.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000820.1;transl_table=11
NC_007606.1	RefSeq	gene	2992828	2993223	.	+	.	ID=gene3169;Dbxref=GeneID:3798444;Name=SDY_3233;Note=SDY3233;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3233
NC_007606.1	RefSeq	CDS	2992828	2993223	.	+	0	ID=cds2812;Parent=gene3169;Dbxref=Genbank:YP_404732.1,GeneID:3798444;Name=YP_404732.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404732.1;transl_table=11
NC_007606.1	RefSeq	gene	2993224	2994642	.	+	.	ID=gene3170;Dbxref=GeneID:3798445;Name=SDY_3234;Note=SDY3234;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3234
NC_007606.1	RefSeq	CDS	2993224	2994642	.	+	0	ID=cds2813;Parent=gene3170;Dbxref=Genbank:YP_404733.1,GeneID:3798445;Name=YP_404733.1;Note=Code: S%3B COG: COG2268;gbkey=CDS;product=hypothetical protein;protein_id=YP_404733.1;transl_table=11
NC_007606.1	RefSeq	gene	2995436	2996869	.	-	.	ID=gene3171;Dbxref=GeneID:3798446;Name=SDY_3235;Note=SDY3235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3235
NC_007606.1	RefSeq	CDS	2995436	2996869	.	-	0	ID=cds2814;Parent=gene3171;Dbxref=Genbank:YP_404734.1,GeneID:3798446;Name=YP_404734.1;Note=''catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D%2CD-heptose-1%2C7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D%2CD-heptose'';gbkey=CDS;product=bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase;protein_id=YP_404734.1;transl_table=11
NC_007606.1	RefSeq	gene	2996917	2999757	.	-	.	ID=gene3172;Dbxref=GeneID:3796748;Name=glnE;Note=SDY3236;gbkey=Gene;gene=glnE;gene_biotype=protein_coding;locus_tag=SDY_3236
NC_007606.1	RefSeq	CDS	2996917	2999757	.	-	0	ID=cds2815;Parent=gene3172;Dbxref=Genbank:YP_404735.1,GeneID:3796748;Name=YP_404735.1;Note=catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase%3B also catalyzes the reverse reaction - deadenylation%3B adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme;gbkey=CDS;gene=glnE;product=bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase;protein_id=YP_404735.1;transl_table=11
NC_007606.1	RefSeq	gene	2999780	3001081	.	-	.	ID=gene3173;Dbxref=GeneID:3796749;Name=ygiF;Note=SDY3237;gbkey=Gene;gene=ygiF;gene_biotype=protein_coding;locus_tag=SDY_3237
NC_007606.1	RefSeq	CDS	2999780	3001081	.	-	0	ID=cds2816;Parent=gene3173;Dbxref=Genbank:YP_404736.1,GeneID:3796749;Name=YP_404736.1;Note=Code: S%3B COG: COG3025;gbkey=CDS;gene=ygiF;product=hypothetical protein;protein_id=YP_404736.1;transl_table=11
NC_007606.1	RefSeq	gene	3001323	3001943	.	+	.	ID=gene3174;Dbxref=GeneID:3796750;Name=ygiM;Note=SDY3238;gbkey=Gene;gene=ygiM;gene_biotype=protein_coding;locus_tag=SDY_3238
NC_007606.1	RefSeq	CDS	3001323	3001943	.	+	0	ID=cds2817;Parent=gene3174;Dbxref=Genbank:YP_404737.1,GeneID:3796750;Name=YP_404737.1;Note=Code: T%3B COG: COG3103;gbkey=CDS;gene=ygiM;product=signal transduction protein;protein_id=YP_404737.1;transl_table=11
NC_007606.1	RefSeq	gene	3002007	3003245	.	+	.	ID=gene3175;Dbxref=GeneID:3796751;Name=cca;Note=SDY3239;gbkey=Gene;gene=cca;gene_biotype=protein_coding;locus_tag=SDY_3239
NC_007606.1	RefSeq	CDS	3002007	3003245	.	+	0	ID=cds2818;Parent=gene3175;Dbxref=Genbank:YP_404738.1,GeneID:3796751;Name=YP_404738.1;Note=''catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template%3B phosphohydrolase activities include hydrolysis of pyrophosphate%2C 5'-nucleoside tri- and diphosphates%2C NADP%2C and 2'-AMP with the production of Pi%2C metal-dependent phosphodiesterase activity for 2'%2C3'-cAMP%2C 2'%2C3'-cGMP%2C and 2'%2C3'-cCMP%2C and hydrolysis 2'%2C3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides%3B these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases'';gbkey=CDS;gene=cca;product=multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase;protein_id=YP_404738.1;transl_table=11
NC_007606.1	RefSeq	gene	3003408	3004228	.	-	.	ID=gene3176;Dbxref=GeneID:3796752;Name=bacA;Note=SDY3240%3B frameshift;gbkey=Gene;gene=bacA;gene_biotype=pseudogene;locus_tag=SDY_3240;pseudo=true
NC_007606.1	RefSeq	region	3003408	3004228	.	-	.	ID=id513;Dbxref=GeneID:3796752;Note=original product: bacitracin resistance protein BacA;gbkey=misc_feature;gene=bacA
NC_007606.1	RefSeq	gene	3004319	3004690	.	-	.	ID=gene3177;Dbxref=GeneID:3796753;Name=folB;Note=SDY3241;gbkey=Gene;gene=folB;gene_biotype=protein_coding;locus_tag=SDY_3241
NC_007606.1	RefSeq	CDS	3004319	3004690	.	-	0	ID=cds2819;Parent=gene3177;Dbxref=Genbank:YP_404739.1,GeneID:3796753;Name=YP_404739.1;Note=''catalyzes the conversion of 7%2C8-dihydroneopterin to 6-hydroxymethyl-7%2C8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin'';gbkey=CDS;gene=folB;product=bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase;protein_id=YP_404739.1;transl_table=11
NC_007606.1	RefSeq	gene	3004792	3005409	.	+	.	ID=gene3178;Dbxref=GeneID:3796754;Name=ygiH;Note=SDY3242;gbkey=Gene;gene=ygiH;gene_biotype=protein_coding;locus_tag=SDY_3242
NC_007606.1	RefSeq	CDS	3004792	3005409	.	+	0	ID=cds2820;Parent=gene3178;Dbxref=Genbank:YP_404740.1,GeneID:3796754;Name=YP_404740.1;Note=involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis%3B functions with PlsX;gbkey=CDS;gene=ygiH;product=glycerol-3-phosphate acyltransferase PlsY;protein_id=YP_404740.1;transl_table=11
NC_007606.1	RefSeq	gene	3005422	3005964	.	-	.	ID=gene3179;Dbxref=GeneID:3796755;Name=ygiP;Note=SDY3243%3B truncated%3B original product:  transcriptional regulator LYSR-type;gbkey=Gene;gene=ygiP;gene_biotype=pseudogene;locus_tag=SDY_3243;pseudo=true
NC_007606.1	RefSeq	region	3006023	3006789	.	+	.	ID=id514;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3006081	3006353	.	+	.	ID=gene3180;Dbxref=GeneID:18263135;Name=SDY_4746;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4746
NC_007606.1	RefSeq	CDS	3006081	3006353	.	+	0	ID=cds2821;Parent=gene3180;Dbxref=Genbank:YP_009000821.1,GeneID:18263135;Name=YP_009000821.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000821.1;transl_table=11
NC_007606.1	RefSeq	gene	3006380	3006775	.	+	.	ID=gene3181;Dbxref=GeneID:3796756;Name=SDY_3244;Note=SDY3244;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3244
NC_007606.1	RefSeq	CDS	3006380	3006775	.	+	0	ID=cds2822;Parent=gene3181;Dbxref=Genbank:YP_404741.1,GeneID:3796756;Name=YP_404741.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404741.1;transl_table=11
NC_007606.1	RefSeq	gene	3006804	3007676	.	+	.	ID=gene3182;Dbxref=GeneID:3796757;Name=ttdA;Note=''SDY3245%3B contains in-frame stop codon%3B original product: L-tartrate dehydratase%2C subunit A'';gbkey=Gene;gene=ttdA;gene_biotype=pseudogene;locus_tag=SDY_3245;pseudo=true
NC_007606.1	RefSeq	gene	3007673	3008278	.	+	.	ID=gene3183;Dbxref=GeneID:3796758;Name=ttdB;Note=''SDY3246%3B contains in-frame stop codon%3B original product: L-tartrate dehydratase%2C subunit B'';gbkey=Gene;gene=ttdB;gene_biotype=pseudogene;locus_tag=SDY_3246;pseudo=true
NC_007606.1	RefSeq	gene	3008327	3009790	.	+	.	ID=gene3184;Dbxref=GeneID:3796759;Name=ygjE;Note=SDY3247;gbkey=Gene;gene=ygjE;gene_biotype=protein_coding;locus_tag=SDY_3247
NC_007606.1	RefSeq	CDS	3008327	3009790	.	+	0	ID=cds2823;Parent=gene3184;Dbxref=Genbank:YP_404742.1,GeneID:3796759;Name=YP_404742.1;Note=Code: P%3B COG: COG0471;gbkey=CDS;gene=ygjE;product=hypothetical protein;protein_id=YP_404742.1;transl_table=11
NC_007606.1	RefSeq	gene	3009833	3010846	.	-	.	ID=gene3185;Dbxref=GeneID:3796760;Name=ygjD;Note=SDY3248;gbkey=Gene;gene=ygjD;gene_biotype=protein_coding;gene_synonym=gcp;locus_tag=SDY_3248
NC_007606.1	RefSeq	CDS	3009833	3010846	.	-	0	ID=cds2824;Parent=gene3185;Dbxref=Genbank:YP_404743.1,GeneID:3796760;Name=YP_404743.1;Note=''in most organisms%2C only the N-terminal domain is present in a single polypeptide%3B in some archaea this domain is fused to a kinase domain%3B this gene is essential for growth in Escherichia coli and Bacillus subtilis%3B the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins%3B the Pyrococcus structure shows DNA-binding properties%2C iron-binding%2C ATP-binding%2C and AP endonuclease activity'';gbkey=CDS;gene=ygjD;product=DNA-binding/iron metalloprotein/AP endonuclease;protein_id=YP_404743.1;transl_table=11
NC_007606.1	RefSeq	gene	3011084	3011299	.	+	.	ID=gene3186;Dbxref=GeneID:3796761;Name=rpsU;Note=SDY3249;gbkey=Gene;gene=rpsU;gene_biotype=protein_coding;locus_tag=SDY_3249
NC_007606.1	RefSeq	CDS	3011084	3011299	.	+	0	ID=cds2825;Parent=gene3186;Dbxref=Genbank:YP_404744.1,GeneID:3796761;Name=YP_404744.1;Note=a small basic protein that is one of the last in the subunit assembly%3B omission does not prevent assembly but the subunit is inactive%3B binds central domain of 16S rRNA;gbkey=CDS;gene=rpsU;product=30S ribosomal protein S21;protein_id=YP_404744.1;transl_table=11
NC_007606.1	RefSeq	gene	3011411	3013156	.	+	.	ID=gene3187;Dbxref=GeneID:3796762;Name=dnaG;Note=SDY3250;gbkey=Gene;gene=dnaG;gene_biotype=protein_coding;locus_tag=SDY_3250
NC_007606.1	RefSeq	CDS	3011411	3013156	.	+	0	ID=cds2826;Parent=gene3187;Dbxref=Genbank:YP_404745.1,GeneID:3796762;Name=YP_404745.1;Note=synthesizes RNA primers at the replication forks;gbkey=CDS;gene=dnaG;product=DNA primase;protein_id=YP_404745.1;transl_table=11
NC_007606.1	RefSeq	gene	3013351	3015192	.	+	.	ID=gene3188;Dbxref=GeneID:3796763;Name=rpoD;Note=SDY3251;gbkey=Gene;gene=rpoD;gene_biotype=protein_coding;locus_tag=SDY_3251
NC_007606.1	RefSeq	CDS	3013351	3015192	.	+	0	ID=cds2827;Parent=gene3188;Dbxref=Genbank:YP_404746.1,GeneID:3796763;Name=YP_404746.1;Note=sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B this is the primary sigma factor of bacteria;gbkey=CDS;gene=rpoD;product=RNA polymerase sigma factor RpoD;protein_id=YP_404746.1;transl_table=11
NC_007606.1	RefSeq	gene	3015271	3015777	.	-	.	ID=gene3189;Dbxref=GeneID:3796764;Name=ygjF;Note=SDY3252;gbkey=Gene;gene=ygjF;gene_biotype=protein_coding;locus_tag=SDY_3252
NC_007606.1	RefSeq	CDS	3015271	3015777	.	-	0	ID=cds2828;Parent=gene3189;Dbxref=Genbank:YP_404747.1,GeneID:3796764;Name=YP_404747.1;Note=Code: L%3B COG: COG3663;gbkey=CDS;gene=ygjF;product=G/U mismatch-specific DNA glycosylase;protein_id=YP_404747.1;transl_table=11
NC_007606.1	RefSeq	gene	3015902	3015977	.	+	.	ID=gene3190;Dbxref=GeneID:3796765;Name=SDY_3253;Note=SDY3253;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3253
NC_007606.1	RefSeq	tRNA	3015902	3015977	.	+	.	ID=rna59;Parent=gene3190;Dbxref=GeneID:3796765;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	exon	3015902	3015977	.	+	.	ID=id515;Parent=rna59;Dbxref=GeneID:3796765;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	gene	3016031	3016795	.	-	.	ID=gene3191;Dbxref=GeneID:3798369;Name=yqjH;Note=SDY3254;gbkey=Gene;gene=yqjH;gene_biotype=protein_coding;locus_tag=SDY_3254
NC_007606.1	RefSeq	CDS	3016031	3016795	.	-	0	ID=cds2829;Parent=gene3191;Dbxref=Genbank:YP_404748.1,GeneID:3798369;Name=YP_404748.1;Note=Code: P%3B COG: COG2375;gbkey=CDS;gene=yqjH;product=hypothetical protein;protein_id=YP_404748.1;transl_table=11
NC_007606.1	RefSeq	gene	3017083	3017706	.	+	.	ID=gene3192;Dbxref=GeneID:3798370;Name=yqjI;Note=SDY3255;gbkey=Gene;gene=yqjI;gene_biotype=protein_coding;locus_tag=SDY_3255
NC_007606.1	RefSeq	CDS	3017083	3017706	.	+	0	ID=cds2830;Parent=gene3192;Dbxref=Genbank:YP_404749.1,GeneID:3798370;Name=YP_404749.1;Note=Code: K%3B COG: COG1695;gbkey=CDS;gene=yqjI;product=hypothetical protein;protein_id=YP_404749.1;transl_table=11
NC_007606.1	RefSeq	gene	3017813	3019333	.	-	.	ID=gene3193;Dbxref=GeneID:3798371;Name=aer;Note=SDY3256;gbkey=Gene;gene=aer;gene_biotype=protein_coding;locus_tag=SDY_3256
NC_007606.1	RefSeq	CDS	3017813	3019333	.	-	0	ID=cds2831;Parent=gene3193;Dbxref=Genbank:YP_404750.1,GeneID:3798371;Name=YP_404750.1;Note=Code: NT%3B COG: COG0840;gbkey=CDS;gene=aer;product=aerotaxis sensor receptor%2C flavoprotein;protein_id=YP_404750.1;transl_table=11
NC_007606.1	RefSeq	gene	3019640	3021130	.	+	.	ID=gene3194;Dbxref=GeneID:3798372;Name=ygjG;Note=SDY3257%3B contains in-frame stop codon%3B original product: probable ornithine aminotransferase;gbkey=Gene;gene=ygjG;gene_biotype=pseudogene;locus_tag=SDY_3257;pseudo=true
NC_007606.1	RefSeq	gene	3021172	3021504	.	-	.	ID=gene3195;Dbxref=GeneID:3798373;Name=ygjH;Note=SDY3258;gbkey=Gene;gene=ygjH;gene_biotype=protein_coding;locus_tag=SDY_3258
NC_007606.1	RefSeq	CDS	3021172	3021504	.	-	0	ID=cds2832;Parent=gene3195;Dbxref=Genbank:YP_404751.1,GeneID:3798373;Name=YP_404751.1;Note=Code: R%3B COG: COG0073;gbkey=CDS;gene=ygjH;product=hypothetical protein;protein_id=YP_404751.1;transl_table=11
NC_007606.1	RefSeq	gene	3021723	3022706	.	+	.	ID=gene3196;Dbxref=GeneID:3798374;Name=ebgR;Note=SDY3259;gbkey=Gene;gene=ebgR;gene_biotype=protein_coding;locus_tag=SDY_3259
NC_007606.1	RefSeq	CDS	3021723	3022706	.	+	0	ID=cds2833;Parent=gene3196;Dbxref=Genbank:YP_404752.1,GeneID:3798374;Name=YP_404752.1;Note=Code: K%3B COG: COG1609;gbkey=CDS;gene=ebgR;product=DNA-binding transcriptional repressor EbgR;protein_id=YP_404752.1;transl_table=11
NC_007606.1	RefSeq	gene	3022853	3025475	.	+	.	ID=gene3197;Dbxref=GeneID:3798375;Name=ebgA;Note=''SDY3260%3B frameshift and truncated%3B original product: evolved beta-D-galactosidase%2C alpha subunit%3B cryptic gene'';gbkey=Gene;gene=ebgA;gene_biotype=pseudogene;locus_tag=SDY_3260;pseudo=true
NC_007606.1	RefSeq	region	3025523	3026290	.	-	.	ID=id516;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3025539	3025934	.	-	.	ID=gene3198;Dbxref=GeneID:3798376;Name=SDY_3261;Note=SDY3261;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3261
NC_007606.1	RefSeq	CDS	3025539	3025934	.	-	0	ID=cds2834;Parent=gene3198;Dbxref=Genbank:YP_404753.1,GeneID:3798376;Name=YP_404753.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404753.1;transl_table=11
NC_007606.1	RefSeq	gene	3025961	3026233	.	-	.	ID=gene3199;Dbxref=GeneID:18263136;Name=SDY_4747;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4747
NC_007606.1	RefSeq	CDS	3025961	3026233	.	-	0	ID=cds2835;Parent=gene3199;Dbxref=Genbank:YP_009000822.1,GeneID:18263136;Name=YP_009000822.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000822.1;transl_table=11
NC_007606.1	RefSeq	gene	3026426	3027497	.	+	.	ID=gene3200;Dbxref=GeneID:3798377;Name=ygjJ;Note=''SDY3262%3B frameshift and contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=ygjJ;gene_biotype=pseudogene;locus_tag=SDY_3262;pseudo=true
NC_007606.1	RefSeq	gene	3027514	3029865	.	+	.	ID=gene3201;Dbxref=GeneID:3798378;Name=ygjK;Note=SDY3263;gbkey=Gene;gene=ygjK;gene_biotype=protein_coding;locus_tag=SDY_3263
NC_007606.1	RefSeq	CDS	3027514	3029865	.	+	0	ID=cds2836;Parent=gene3201;Dbxref=Genbank:YP_404754.1,GeneID:3798378;Name=YP_404754.1;gbkey=CDS;gene=ygjK;product=glycosyl hydrolase;protein_id=YP_404754.1;transl_table=11
NC_007606.1	RefSeq	gene	3030250	3031689	.	+	.	ID=gene3202;Dbxref=GeneID:3798379;Name=SDY_3264;Note=SDY3264;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3264
NC_007606.1	RefSeq	CDS	3030250	3031689	.	+	0	ID=cds2837;Parent=gene3202;Dbxref=Genbank:YP_404755.1,GeneID:3798379;Name=YP_404755.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404755.1;transl_table=11
NC_007606.1	RefSeq	gene	3031993	3034011	.	+	.	ID=gene3203;Dbxref=GeneID:3798380;Name=ygjL;Note=SDY3265;gbkey=Gene;gene=ygjL;gene_biotype=protein_coding;locus_tag=SDY_3265
NC_007606.1	RefSeq	CDS	3031993	3034011	.	+	0	ID=cds2838;Parent=gene3203;Dbxref=Genbank:YP_404756.1,GeneID:3798380;Name=YP_404756.1;Note=Code: C%3B COG: COG1902;gbkey=CDS;gene=ygjL;product=NADPH dehydrogenase;protein_id=YP_404756.1;transl_table=11
NC_007606.1	RefSeq	gene	3034056	3034472	.	-	.	ID=gene3204;Dbxref=GeneID:3798381;Name=ygjM;Note=SDY3266;gbkey=Gene;gene=ygjM;gene_biotype=protein_coding;locus_tag=SDY_3266
NC_007606.1	RefSeq	CDS	3034056	3034472	.	-	0	ID=cds2839;Parent=gene3204;Dbxref=Genbank:YP_404757.1,GeneID:3798381;Name=YP_404757.1;Note=Code: K%3B COG: COG5499;gbkey=CDS;gene=ygjM;product=hypothetical protein;protein_id=YP_404757.1;transl_table=11
NC_007606.1	RefSeq	gene	3034742	3035908	.	-	.	ID=gene3205;Dbxref=GeneID:3798382;Name=ygjO;Note=SDY3267;gbkey=Gene;gene=ygjO;gene_biotype=protein_coding;locus_tag=SDY_3267
NC_007606.1	RefSeq	CDS	3034742	3035908	.	-	0	ID=cds2840;Parent=gene3205;Dbxref=Genbank:YP_404758.1,GeneID:3798382;Name=YP_404758.1;Note=Code: J%3B COG: COG2813;gbkey=CDS;gene=ygjO;product=SAM-dependent 23S ribosomal RNA mG1835 methyltransferase;protein_id=YP_404758.1;transl_table=11
NC_007606.1	RefSeq	gene	3035927	3036466	.	+	.	ID=gene3206;Dbxref=GeneID:3798383;Name=ygjP;Note=SDY3268;gbkey=Gene;gene=ygjP;gene_biotype=protein_coding;locus_tag=SDY_3268
NC_007606.1	RefSeq	CDS	3035927	3036466	.	+	0	ID=cds2841;Parent=gene3206;Dbxref=Genbank:YP_404759.1,GeneID:3798383;Name=YP_404759.1;Note=Code: R%3B COG: COG1451;gbkey=CDS;gene=ygjP;product=hypothetical protein;protein_id=YP_404759.1;transl_table=11
NC_007606.1	RefSeq	region	3036539	3037304	.	+	.	ID=id517;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3036596	3036868	.	+	.	ID=gene3207;Dbxref=GeneID:18263137;Name=SDY_4748;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4748
NC_007606.1	RefSeq	CDS	3036596	3036868	.	+	0	ID=cds2842;Parent=gene3207;Dbxref=Genbank:YP_009000823.1,GeneID:18263137;Name=YP_009000823.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000823.1;transl_table=11
NC_007606.1	RefSeq	gene	3036895	3037290	.	+	.	ID=gene3208;Dbxref=GeneID:3798385;Name=SDY_3270;Note=SDY3270;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3270
NC_007606.1	RefSeq	CDS	3036895	3037290	.	+	0	ID=cds2843;Parent=gene3208;Dbxref=Genbank:YP_404761.1,GeneID:3798385;Name=YP_404761.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404761.1;transl_table=11
NC_007606.1	RefSeq	gene	3037317	3038010	.	+	.	ID=gene3209;Dbxref=GeneID:3798386;Name=ygjQ;Note=''SDY3271%3B frameshift%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=ygjQ;gene_biotype=pseudogene;locus_tag=SDY_3271;pseudo=true
NC_007606.1	RefSeq	gene	3038071	3039075	.	+	.	ID=gene3210;Dbxref=GeneID:3798387;Name=ygjR;Note=SDY3272;gbkey=Gene;gene=ygjR;gene_biotype=protein_coding;locus_tag=SDY_3272
NC_007606.1	RefSeq	CDS	3038071	3039075	.	+	0	ID=cds2844;Parent=gene3210;Dbxref=Genbank:YP_404762.1,GeneID:3798387;Name=YP_404762.1;Note=Code: R%3B COG: COG0673;gbkey=CDS;gene=ygjR;product=hypothetical protein;protein_id=YP_404762.1;transl_table=11
NC_007606.1	RefSeq	gene	3039358	3040323	.	+	.	ID=gene3211;Dbxref=GeneID:3798670;Name=ygjT;Note=SDY3273;gbkey=Gene;gene=ygjT;gene_biotype=protein_coding;locus_tag=SDY_3273
NC_007606.1	RefSeq	CDS	3039358	3040323	.	+	0	ID=cds2845;Parent=gene3211;Dbxref=Genbank:YP_404763.1,GeneID:3798670;Name=YP_404763.1;Note=Code: P%3B COG: COG0861;gbkey=CDS;gene=ygjT;product=transport protein;protein_id=YP_404763.1;transl_table=11
NC_007606.1	RefSeq	gene	3040877	3042121	.	+	.	ID=gene3212;Dbxref=GeneID:3798671;Name=ygjU;Note=SDY3274;gbkey=Gene;gene=ygjU;gene_biotype=protein_coding;locus_tag=SDY_3274
NC_007606.1	RefSeq	CDS	3040877	3042121	.	+	0	ID=cds2846;Parent=gene3212;Dbxref=Genbank:YP_404764.1,GeneID:3798671;Name=YP_404764.1;Note=involved in the import of serine and threonine coupled with the import of sodium;gbkey=CDS;gene=ygjU;product=serine/threonine transporter SstT;protein_id=YP_404764.1;transl_table=11
NC_007606.1	RefSeq	gene	3042126	3042665	.	-	.	ID=gene3213;Dbxref=GeneID:3798672;Name=ygjV;Note=SDY3275;gbkey=Gene;gene=ygjV;gene_biotype=protein_coding;locus_tag=SDY_3275
NC_007606.1	RefSeq	CDS	3042126	3042665	.	-	0	ID=cds2847;Parent=gene3213;Dbxref=Genbank:YP_404765.1,GeneID:3798672;Name=YP_404765.1;gbkey=CDS;gene=ygjV;product=hypothetical protein;protein_id=YP_404765.1;transl_table=11
NC_007606.1	RefSeq	gene	3042759	3044246	.	-	.	ID=gene3214;Dbxref=GeneID:3798673;Name=uxaA;Note=SDY3276;gbkey=Gene;gene=uxaA;gene_biotype=protein_coding;locus_tag=SDY_3276
NC_007606.1	RefSeq	CDS	3042759	3044246	.	-	0	ID=cds2848;Parent=gene3214;Dbxref=Genbank:YP_404766.1,GeneID:3798673;Name=YP_404766.1;Note=Code: G%3B COG: COG2721;gbkey=CDS;gene=uxaA;product=altronate hydrolase;protein_id=YP_404766.1;transl_table=11
NC_007606.1	RefSeq	gene	3044261	3045506	.	-	.	ID=gene3215;Dbxref=GeneID:3798674;Name=uxaC;Note=SDY3277%3B frameshift%3B original product: uronate isomerase;gbkey=Gene;gene=uxaC;gene_biotype=pseudogene;locus_tag=SDY_3277;pseudo=true
NC_007606.1	RefSeq	gene	3045854	3047272	.	+	.	ID=gene3216;Dbxref=GeneID:3798675;Name=exuT;Note=SDY3278;gbkey=Gene;gene=exuT;gene_biotype=protein_coding;locus_tag=SDY_3278
NC_007606.1	RefSeq	CDS	3045854	3047272	.	+	0	ID=cds2849;Parent=gene3216;Dbxref=Genbank:YP_404767.1,GeneID:3798675;Name=YP_404767.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=exuT;product=hexuronates transporter;protein_id=YP_404767.1;transl_table=11
NC_007606.1	RefSeq	region	3047282	3048049	.	-	.	ID=id518;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3047297	3047674	.	-	.	ID=gene3217;Dbxref=GeneID:3798676;Name=insB;Note=SDY3279;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3279
NC_007606.1	RefSeq	CDS	3047297	3047674	.	-	0	ID=cds2850;Parent=gene3217;Dbxref=Genbank:YP_404768.1,GeneID:3798676;Name=YP_404768.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404768.1;transl_table=11
NC_007606.1	RefSeq	gene	3047719	3047994	.	-	.	ID=gene3218;Dbxref=GeneID:3798677;Name=insA;Note=SDY3280;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3280
NC_007606.1	RefSeq	CDS	3047719	3047994	.	-	0	ID=cds2851;Parent=gene3218;Dbxref=Genbank:YP_404769.1,GeneID:3798677;Name=YP_404769.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404769.1;transl_table=11
NC_007606.1	RefSeq	gene	3048179	3048955	.	+	.	ID=gene3219;Dbxref=GeneID:3798678;Name=exuR;Note=SDY3281;gbkey=Gene;gene=exuR;gene_biotype=protein_coding;locus_tag=SDY_3281
NC_007606.1	RefSeq	CDS	3048179	3048955	.	+	0	ID=cds2852;Parent=gene3219;Dbxref=Genbank:YP_404770.2,GeneID:3798678;Name=YP_404770.2;Note=''regulates the exuT%2C uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.'';gbkey=CDS;gene=exuR;product=DNA-binding transcriptional repressor ExuR;protein_id=YP_404770.2;transl_table=11
NC_007606.1	RefSeq	gene	3049300	3049962	.	+	.	ID=gene3220;Dbxref=GeneID:3798679;Name=yqjA;Note=SDY3282;gbkey=Gene;gene=yqjA;gene_biotype=protein_coding;locus_tag=SDY_3282
NC_007606.1	RefSeq	CDS	3049300	3049962	.	+	0	ID=cds2853;Parent=gene3220;Dbxref=Genbank:YP_404771.1,GeneID:3798679;Name=YP_404771.1;Note=Code: S%3B COG: COG0586;gbkey=CDS;gene=yqjA;product=hypothetical protein;protein_id=YP_404771.1;transl_table=11
NC_007606.1	RefSeq	gene	3049966	3050349	.	+	.	ID=gene3221;Dbxref=GeneID:3798680;Name=yqjB;Note=SDY3283;gbkey=Gene;gene=yqjB;gene_biotype=protein_coding;locus_tag=SDY_3283
NC_007606.1	RefSeq	CDS	3049966	3050349	.	+	0	ID=cds2854;Parent=gene3221;Dbxref=Genbank:YP_404772.1,GeneID:3798680;Name=YP_404772.1;gbkey=CDS;gene=yqjB;product=hypothetical protein;protein_id=YP_404772.1;transl_table=11
NC_007606.1	RefSeq	gene	3050481	3050864	.	+	.	ID=gene3222;Dbxref=GeneID:3798681;Name=yqjC;Note=SDY3284;gbkey=Gene;gene=yqjC;gene_biotype=protein_coding;locus_tag=SDY_3284
NC_007606.1	RefSeq	CDS	3050481	3050864	.	+	0	ID=cds2855;Parent=gene3222;Dbxref=Genbank:YP_404773.1,GeneID:3798681;Name=YP_404773.1;gbkey=CDS;gene=yqjC;product=hypothetical protein;protein_id=YP_404773.1;transl_table=11
NC_007606.1	RefSeq	gene	3050902	3051207	.	+	.	ID=gene3223;Dbxref=GeneID:3798682;Name=yqjD;Note=SDY3285;gbkey=Gene;gene=yqjD;gene_biotype=protein_coding;locus_tag=SDY_3285
NC_007606.1	RefSeq	CDS	3050902	3051207	.	+	0	ID=cds2856;Parent=gene3223;Dbxref=Genbank:YP_404774.1,GeneID:3798682;Name=YP_404774.1;Note=Code: S%3B COG: COG4575;gbkey=CDS;gene=yqjD;product=hypothetical protein;protein_id=YP_404774.1;transl_table=11
NC_007606.1	RefSeq	gene	3051210	3051614	.	+	.	ID=gene3224;Dbxref=GeneID:3798683;Name=yqjE;Note=SDY3286;gbkey=Gene;gene=yqjE;gene_biotype=protein_coding;locus_tag=SDY_3286
NC_007606.1	RefSeq	CDS	3051210	3051614	.	+	0	ID=cds2857;Parent=gene3224;Dbxref=Genbank:YP_404775.1,GeneID:3798683;Name=YP_404775.1;Note=Code: S%3B COG: COG5393;gbkey=CDS;gene=yqjE;product=hypothetical protein;protein_id=YP_404775.1;transl_table=11
NC_007606.1	RefSeq	gene	3051604	3051903	.	+	.	ID=gene3225;Dbxref=GeneID:3798684;Name=SDY_3287;Note=SDY3287;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3287
NC_007606.1	RefSeq	CDS	3051604	3051903	.	+	0	ID=cds2858;Parent=gene3225;Dbxref=Genbank:YP_404776.1,GeneID:3798684;Name=YP_404776.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404776.1;transl_table=11
NC_007606.1	RefSeq	region	3052017	3053347	.	-	.	ID=id519;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3052028	3052933	.	-	.	ID=gene3226;Dbxref=GeneID:3798685;Name=SDY_3288;Note=SDY3288;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3288
NC_007606.1	RefSeq	CDS	3052028	3052933	.	-	0	ID=cds2859;Parent=gene3226;Dbxref=Genbank:YP_404777.2,GeneID:3798685;Name=YP_404777.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_404777.2;transl_table=11
NC_007606.1	RefSeq	gene	3052891	3053256	.	-	.	ID=gene3227;Dbxref=GeneID:3798686;Name=SDY_3289;Note=SDY3289;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3289
NC_007606.1	RefSeq	CDS	3052891	3053256	.	-	0	ID=cds2860;Parent=gene3227;Dbxref=Genbank:YP_404778.1,GeneID:3798686;Name=YP_404778.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_404778.1;transl_table=11
NC_007606.1	RefSeq	gene	3053426	3053818	.	+	.	ID=gene3228;Dbxref=GeneID:3798687;Name=yqjF;Note=SDY3290;gbkey=Gene;gene=yqjF;gene_biotype=protein_coding;locus_tag=SDY_3290
NC_007606.1	RefSeq	CDS	3053426	3053818	.	+	0	ID=cds2861;Parent=gene3228;Dbxref=Genbank:YP_404779.2,GeneID:3798687;Name=YP_404779.2;Note=Code: S%3B COG: COG2259;gbkey=CDS;gene=yqjF;product=hypothetical protein;protein_id=YP_404779.2;transl_table=11
NC_007606.1	RefSeq	gene	3053888	3054874	.	+	.	ID=gene3229;Dbxref=GeneID:3798688;Name=yqjG;Note=SDY3291;gbkey=Gene;gene=yqjG;gene_biotype=protein_coding;locus_tag=SDY_3291
NC_007606.1	RefSeq	CDS	3053888	3054874	.	+	0	ID=cds2862;Parent=gene3229;Dbxref=Genbank:YP_404780.1,GeneID:3798688;Name=YP_404780.1;Note=Code: O%3B COG: COG0435;gbkey=CDS;gene=yqjG;product=transferase;protein_id=YP_404780.1;transl_table=11
NC_007606.1	RefSeq	gene	3055157	3055522	.	+	.	ID=gene3230;Dbxref=GeneID:3796363;Name=yhaH;Note=SDY3292;gbkey=Gene;gene=yhaH;gene_biotype=protein_coding;locus_tag=SDY_3292
NC_007606.1	RefSeq	CDS	3055157	3055522	.	+	0	ID=cds2863;Parent=gene3230;Dbxref=Genbank:YP_404781.1,GeneID:3796363;Name=YP_404781.1;Note=Code: S%3B COG: COG3152;gbkey=CDS;gene=yhaH;product=cytochrome;protein_id=YP_404781.1;transl_table=11
NC_007606.1	RefSeq	region	3055698	3056463	.	-	.	ID=id520;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3055712	3056107	.	-	.	ID=gene3231;Dbxref=GeneID:3796364;Name=SDY_3293;Note=SDY3293;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3293
NC_007606.1	RefSeq	CDS	3055712	3056107	.	-	0	ID=cds2864;Parent=gene3231;Dbxref=Genbank:YP_404782.1,GeneID:3796364;Name=YP_404782.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_404782.1;transl_table=11
NC_007606.1	RefSeq	gene	3056134	3056406	.	-	.	ID=gene3232;Dbxref=GeneID:18263138;Name=SDY_4749;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4749
NC_007606.1	RefSeq	CDS	3056134	3056406	.	-	0	ID=cds2865;Parent=gene3232;Dbxref=Genbank:YP_009000824.1,GeneID:18263138;Name=YP_009000824.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000824.1;transl_table=11
NC_007606.1	RefSeq	gene	3056538	3057671	.	+	.	ID=gene3233;Dbxref=GeneID:3796365;Name=yhaI;Note=SDY3294%3B contains IS1 insertion%3B original product:  cytochrome;gbkey=Gene;gene=yhaI;gene_biotype=pseudogene;locus_tag=SDY_3294;pseudo=true
NC_007606.1	RefSeq	region	3056645	3057412	.	+	.	ID=id521;Dbxref=GeneID:3796365;gbkey=mobile_element;gene=yhaI
NC_007606.1	RefSeq	gene	3056700	3056975	.	+	.	ID=gene3234;Dbxref=GeneID:3796366;Name=insA;Note=SDY3295;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3295
NC_007606.1	RefSeq	CDS	3056700	3056975	.	+	0	ID=cds2866;Parent=gene3234;Dbxref=Genbank:YP_404783.1,GeneID:3796366;Name=YP_404783.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404783.1;transl_table=11
NC_007606.1	RefSeq	gene	3057020	3057397	.	+	.	ID=gene3235;Dbxref=GeneID:3796367;Name=insB;Note=SDY3296;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3296
NC_007606.1	RefSeq	CDS	3057020	3057397	.	+	0	ID=cds2867;Parent=gene3235;Dbxref=Genbank:YP_404784.1,GeneID:3796367;Name=YP_404784.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404784.1;transl_table=11
NC_007606.1	RefSeq	gene	3057722	3058627	.	-	.	ID=gene3236;Dbxref=GeneID:3796368;Name=yhaJ;Note=SDY3297;gbkey=Gene;gene=yhaJ;gene_biotype=protein_coding;locus_tag=SDY_3297
NC_007606.1	RefSeq	CDS	3057722	3058627	.	-	0	ID=cds2868;Parent=gene3236;Dbxref=Genbank:YP_404785.1,GeneID:3796368;Name=YP_404785.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=yhaJ;product=LysR family transcriptional regulator;protein_id=YP_404785.1;transl_table=11
NC_007606.1	RefSeq	gene	3058732	3059433	.	+	.	ID=gene3237;Dbxref=GeneID:3796369;Name=yhaK;Note=SDY3298;gbkey=Gene;gene=yhaK;gene_biotype=protein_coding;locus_tag=SDY_3298
NC_007606.1	RefSeq	CDS	3058732	3059433	.	+	0	ID=cds2869;Parent=gene3237;Dbxref=Genbank:YP_404786.1,GeneID:3796369;Name=YP_404786.1;Note=Code: R%3B COG: COG1741;gbkey=CDS;gene=yhaK;product=hypothetical protein;protein_id=YP_404786.1;transl_table=11
NC_007606.1	RefSeq	gene	3059453	3059620	.	+	.	ID=gene3238;Dbxref=GeneID:3796370;Name=yhaL;Note=SDY3299;gbkey=Gene;gene=yhaL;gene_biotype=protein_coding;locus_tag=SDY_3299
NC_007606.1	RefSeq	CDS	3059453	3059620	.	+	0	ID=cds2870;Parent=gene3238;Dbxref=Genbank:YP_404787.1,GeneID:3796370;Name=YP_404787.1;gbkey=CDS;gene=yhaL;product=hypothetical protein;protein_id=YP_404787.1;transl_table=11
NC_007606.1	RefSeq	gene	3059754	3061064	.	-	.	ID=gene3239;Dbxref=GeneID:3796371;Name=yhaNM;Note=SDY3300;gbkey=Gene;gene=yhaNM;gene_biotype=protein_coding;locus_tag=SDY_3300
NC_007606.1	RefSeq	CDS	3059754	3061064	.	-	0	ID=cds2871;Parent=gene3239;Dbxref=Genbank:YP_404788.1,GeneID:3796371;Name=YP_404788.1;Note=Code: S%3B COG: COG3681;gbkey=CDS;gene=yhaNM;product=hypothetical protein;protein_id=YP_404788.1;transl_table=11
NC_007606.1	RefSeq	gene	3061092	3062423	.	-	.	ID=gene3240;Dbxref=GeneID:3796372;Name=yhaO;Note=SDY3301;gbkey=Gene;gene=yhaO;gene_biotype=protein_coding;locus_tag=SDY_3301
NC_007606.1	RefSeq	CDS	3061092	3062423	.	-	0	ID=cds2872;Parent=gene3240;Dbxref=Genbank:YP_404789.1,GeneID:3796372;Name=YP_404789.1;Note=Code: E%3B COG: COG0814;gbkey=CDS;gene=yhaO;product=transport system permease;protein_id=YP_404789.1;transl_table=11
NC_007606.1	RefSeq	region	3062598	3063365	.	-	.	ID=id522;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3062613	3062990	.	-	.	ID=gene3241;Dbxref=GeneID:3796373;Name=insB;Note=SDY3302;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3302
NC_007606.1	RefSeq	CDS	3062613	3062990	.	-	0	ID=cds2873;Parent=gene3241;Dbxref=Genbank:YP_404790.1,GeneID:3796373;Name=YP_404790.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404790.1;transl_table=11
NC_007606.1	RefSeq	gene	3063035	3063310	.	-	.	ID=gene3242;Dbxref=GeneID:3796374;Name=insA;Note=SDY3303;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3303
NC_007606.1	RefSeq	CDS	3063035	3063310	.	-	0	ID=cds2874;Parent=gene3242;Dbxref=Genbank:YP_404791.1,GeneID:3796374;Name=YP_404791.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_404791.1;transl_table=11
NC_007606.1	RefSeq	gene	3063475	3064839	.	-	.	ID=gene3243;Dbxref=GeneID:3796375;Name=yhaP;Note=SDY3304;gbkey=Gene;gene=yhaP;gene_biotype=protein_coding;locus_tag=SDY_3304
NC_007606.1	RefSeq	CDS	3063475	3064839	.	-	0	ID=cds2875;Parent=gene3243;Dbxref=Genbank:YP_404792.2,GeneID:3796375;Name=YP_404792.2;Note=Code: E%3B COG: COG1760;gbkey=CDS;gene=yhaP;product=L-serine dehydratase;protein_id=YP_404792.2;transl_table=11
NC_007606.1	RefSeq	gene	3064911	3065364	.	-	.	ID=gene3244;Dbxref=GeneID:3796376;Name=yhaR;Note=''SDY3305%3B frameshift%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yhaR;gene_biotype=pseudogene;locus_tag=SDY_3305;pseudo=true
NC_007606.1	RefSeq	gene	3065315	3067609	.	-	.	ID=gene3245;Dbxref=GeneID:3796377;Name=tdcE;Note=SDY3306;gbkey=Gene;gene=tdcE;gene_biotype=protein_coding;locus_tag=SDY_3306
NC_007606.1	RefSeq	CDS	3065315	3067609	.	-	0	ID=cds2876;Parent=gene3245;Dbxref=Genbank:YP_404793.1,GeneID:3796377;Name=YP_404793.1;Note=Code: C%3B COG: COG1882;gbkey=CDS;gene=tdcE;product=formate acetyltransferase 3;protein_id=YP_404793.1;transl_table=11
NC_007606.1	RefSeq	gene	3067643	3068863	.	-	.	ID=gene3246;Dbxref=GeneID:3796378;Name=tdcD;Note=SDY3307;gbkey=Gene;gene=tdcD;gene_biotype=protein_coding;locus_tag=SDY_3307
NC_007606.1	RefSeq	CDS	3067643	3068863	.	-	0	ID=cds2877;Parent=gene3246;Dbxref=Genbank:YP_404794.1,GeneID:3796378;Name=YP_404794.1;Note=catalyzes the formation of propanoyl phosphate from propanoate and ATP%3B TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism;gbkey=CDS;gene=tdcD;product=propionate/acetate kinase;protein_id=YP_404794.1;transl_table=11
NC_007606.1	RefSeq	gene	3068877	3070208	.	-	.	ID=gene3247;Dbxref=GeneID:3796379;Name=tdcC;Note=SDY3308;gbkey=Gene;gene=tdcC;gene_biotype=protein_coding;locus_tag=SDY_3308
NC_007606.1	RefSeq	CDS	3068877	3070208	.	-	0	ID=cds2878;Parent=gene3247;Dbxref=Genbank:YP_404795.1,GeneID:3796379;Name=YP_404795.1;Note=involved in the import of threonine and serine in combination with the import of a proton;gbkey=CDS;gene=tdcC;product=threonine/serine transporter TdcC;protein_id=YP_404795.1;transl_table=11
NC_007606.1	RefSeq	gene	3070230	3071219	.	-	.	ID=gene3248;Dbxref=GeneID:3796380;Name=tdcB;Note=SDY3309;gbkey=Gene;gene=tdcB;gene_biotype=protein_coding;locus_tag=SDY_3309
NC_007606.1	RefSeq	CDS	3070230	3071219	.	-	0	ID=cds2879;Parent=gene3248;Dbxref=Genbank:YP_404796.1,GeneID:3796380;Name=YP_404796.1;Note=catalyzes the formation of 2-oxobutanoate from L-threonine%3B catabolic;gbkey=CDS;gene=tdcB;product=threonine dehydratase;protein_id=YP_404796.1;transl_table=11
NC_007606.1	RefSeq	gene	3071318	3072256	.	-	.	ID=gene3249;Dbxref=GeneID:3796381;Name=tdcA;Note=SDY3310;gbkey=Gene;gene=tdcA;gene_biotype=protein_coding;locus_tag=SDY_3310
NC_007606.1	RefSeq	CDS	3071318	3072256	.	-	0	ID=cds2880;Parent=gene3249;Dbxref=Genbank:YP_404797.1,GeneID:3796381;Name=YP_404797.1;Note=regulates the tdcABCDEFG operon which is involved in amino acid degradation;gbkey=CDS;gene=tdcA;product=DNA-binding transcriptional activator TdcA;protein_id=YP_404797.1;transl_table=11
NC_007606.1	RefSeq	gene	3072445	3072789	.	+	.	ID=gene3250;Dbxref=GeneID:3796382;Name=tdcR;Note=SDY3311;gbkey=Gene;gene=tdcR;gene_biotype=protein_coding;locus_tag=SDY_3311
NC_007606.1	RefSeq	CDS	3072445	3072789	.	+	0	ID=cds2881;Parent=gene3250;Dbxref=Genbank:YP_404798.1,GeneID:3796382;Name=YP_404798.1;Note=participates in controlling the expression of several structural genes for the enzyme threonine dehydratase%3B TdcR activates the tdcABCDEFG operon;gbkey=CDS;gene=tdcR;product=DNA-binding transcriptional activator TdcR;protein_id=YP_404798.1;transl_table=11
NC_007606.1	RefSeq	region	3073075	3073840	.	+	.	ID=id523;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3073132	3073404	.	+	.	ID=gene3251;Dbxref=GeneID:18263139;Name=SDY_4750;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4750
NC_007606.1	RefSeq	CDS	3073132	3073404	.	+	0	ID=cds2882;Parent=gene3251;Dbxref=Genbank:YP_009000825.1,GeneID:18263139;Name=YP_009000825.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000825.1;transl_table=11
NC_007606.1	RefSeq	gene	3073431	3073826	.	+	.	ID=gene3252;Dbxref=GeneID:3798388;Name=SDY_3312;Note=SDY3312;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3312;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	3074200	3074967	.	-	.	ID=id524;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3074215	3074592	.	-	.	ID=gene3253;Dbxref=GeneID:3798390;Name=insB;Note=SDY3314;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3314
NC_007606.1	RefSeq	CDS	3074215	3074592	.	-	0	ID=cds2883;Parent=gene3253;Dbxref=Genbank:YP_404801.1,GeneID:3798390;Name=YP_404801.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404801.1;transl_table=11
NC_007606.1	RefSeq	gene	3074637	3074912	.	-	.	ID=gene3254;Dbxref=GeneID:3798391;Name=insA;Note=SDY3315;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3315
NC_007606.1	RefSeq	CDS	3074637	3074912	.	-	0	ID=cds2884;Parent=gene3254;Dbxref=Genbank:YP_404802.1,GeneID:3798391;Name=YP_404802.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404802.1;transl_table=11
NC_007606.1	RefSeq	gene	3074968	3076372	.	+	.	ID=gene3255;Dbxref=GeneID:3798392;Name=yhaC;Note=''SDY3316%3B contains iso-IS1 insertion%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yhaC;gene_biotype=pseudogene;locus_tag=SDY_3316;pseudo=true
NC_007606.1	RefSeq	region	3075343	3076108	.	-	.	ID=id525;gbkey=mobile_element;gene=yhaC
NC_007606.1	RefSeq	gene	3075357	3075752	.	-	.	ID=gene3256;Dbxref=GeneID:3798393;Name=SDY_3317;Note=SDY3317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3317
NC_007606.1	RefSeq	CDS	3075357	3075752	.	-	0	ID=cds2885;Parent=gene3256;Dbxref=Genbank:YP_404803.1,GeneID:3798393;Name=YP_404803.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404803.1;transl_table=11
NC_007606.1	RefSeq	gene	3075779	3076051	.	-	.	ID=gene3257;Dbxref=GeneID:18263140;Name=SDY_4752;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4752
NC_007606.1	RefSeq	CDS	3075779	3076051	.	-	0	ID=cds2886;Parent=gene3257;Dbxref=Genbank:YP_009000826.1,GeneID:18263140;Name=YP_009000826.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000826.1;transl_table=11
NC_007606.1	RefSeq	gene	3077008	3078153	.	-	.	ID=gene3258;Dbxref=GeneID:3798394;Name=yhaD;Note=SDY3318;gbkey=Gene;gene=yhaD;gene_biotype=protein_coding;locus_tag=SDY_3318
NC_007606.1	RefSeq	CDS	3077008	3078153	.	-	0	ID=cds2887;Parent=gene3258;Dbxref=Genbank:YP_404804.2,GeneID:3798394;Name=YP_404804.2;Note=Code: G%3B COG: COG1929;gbkey=CDS;gene=yhaD;product=glycerate kinase;protein_id=YP_404804.2;transl_table=11
NC_007606.1	RefSeq	gene	3078250	3079140	.	-	.	ID=gene3259;Dbxref=GeneID:3798395;Name=garR;Note=SDY3319;gbkey=Gene;gene=garR;gene_biotype=protein_coding;locus_tag=SDY_3319
NC_007606.1	RefSeq	CDS	3078250	3079140	.	-	0	ID=cds2888;Parent=gene3259;Dbxref=Genbank:YP_404805.2,GeneID:3798395;Name=YP_404805.2;Note=catalyzes the reduction of tartronate semialdehyde to glycerate;gbkey=CDS;gene=garR;product=tartronate semialdehyde reductase;protein_id=YP_404805.2;transl_table=11
NC_007606.1	RefSeq	gene	3079170	3079940	.	-	.	ID=gene3260;Dbxref=GeneID:3798396;Name=yhaF;Note=SDY3320;gbkey=Gene;gene=yhaF;gene_biotype=protein_coding;locus_tag=SDY_3320
NC_007606.1	RefSeq	CDS	3079170	3079940	.	-	0	ID=cds2889;Parent=gene3260;Dbxref=Genbank:YP_404806.1,GeneID:3798396;Name=YP_404806.1;Note=cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate;gbkey=CDS;gene=yhaF;product=alpha-dehydro-beta-deoxy-D-glucarate aldolase;protein_id=YP_404806.1;transl_table=11
NC_007606.1	RefSeq	gene	3079956	3081253	.	-	.	ID=gene3261;Dbxref=GeneID:3798397;Name=yhaU;Note=SDY3321%3B frameshift%3B original product:  transport protein;gbkey=Gene;gene=yhaU;gene_biotype=pseudogene;locus_tag=SDY_3321;pseudo=true
NC_007606.1	RefSeq	region	3081268	3082035	.	+	.	ID=id526;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3081323	3081598	.	+	.	ID=gene3262;Dbxref=GeneID:3798398;Name=insA;Note=SDY3322;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3322
NC_007606.1	RefSeq	CDS	3081323	3081598	.	+	0	ID=cds2890;Parent=gene3262;Dbxref=Genbank:YP_404807.1,GeneID:3798398;Name=YP_404807.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404807.1;transl_table=11
NC_007606.1	RefSeq	gene	3081643	3082020	.	+	.	ID=gene3263;Dbxref=GeneID:3798399;Name=insB;Note=SDY3323;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3323
NC_007606.1	RefSeq	CDS	3081643	3082020	.	+	0	ID=cds2891;Parent=gene3263;Dbxref=Genbank:YP_404808.1,GeneID:3798399;Name=YP_404808.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404808.1;transl_table=11
NC_007606.1	RefSeq	gene	3082053	3083144	.	+	.	ID=gene3264;Dbxref=GeneID:3798400;Name=yraK;Note=SDY3324;gbkey=Gene;gene=yraK;gene_biotype=protein_coding;locus_tag=SDY_3324
NC_007606.1	RefSeq	CDS	3082053	3083144	.	+	0	ID=cds2892;Parent=gene3264;Dbxref=Genbank:YP_404809.1,GeneID:3798400;Name=YP_404809.1;Note=Code: NU%3B COG: COG3539;gbkey=CDS;gene=yraK;product=fimbrial protein;protein_id=YP_404809.1;transl_table=11
NC_007606.1	RefSeq	gene	3083187	3084047	.	-	.	ID=gene3265;Dbxref=GeneID:3798401;Name=yraL;Note=SDY3325;gbkey=Gene;gene=yraL;gene_biotype=protein_coding;locus_tag=SDY_3325
NC_007606.1	RefSeq	CDS	3083187	3084047	.	-	0	ID=cds2893;Parent=gene3265;Dbxref=Genbank:YP_404810.1,GeneID:3798401;Name=YP_404810.1;Note=Code: R%3B COG: COG0313;gbkey=CDS;gene=yraL;product=hypothetical protein;protein_id=YP_404810.1;transl_table=11
NC_007606.1	RefSeq	gene	3084112	3086148	.	+	.	ID=gene3266;Dbxref=GeneID:3798402;Name=yraM;Note=SDY3326;gbkey=Gene;gene=yraM;gene_biotype=protein_coding;locus_tag=SDY_3326
NC_007606.1	RefSeq	CDS	3084112	3086148	.	+	0	ID=cds2894;Parent=gene3266;Dbxref=Genbank:YP_404811.1,GeneID:3798402;Name=YP_404811.1;Note=Code: R%3B COG: COG3107;gbkey=CDS;gene=yraM;product=glycosylase;protein_id=YP_404811.1;transl_table=11
NC_007606.1	RefSeq	gene	3086106	3086501	.	+	.	ID=gene3267;Dbxref=GeneID:3798403;Name=yraN;Note=SDY3327;gbkey=Gene;gene=yraN;gene_biotype=protein_coding;locus_tag=SDY_3327
NC_007606.1	RefSeq	CDS	3086106	3086501	.	+	0	ID=cds2895;Parent=gene3267;Dbxref=Genbank:YP_404812.1,GeneID:3798403;Name=YP_404812.1;Note=Code: L%3B COG: COG0792;gbkey=CDS;gene=yraN;product=hypothetical protein;protein_id=YP_404812.1;transl_table=11
NC_007606.1	RefSeq	gene	3086521	3087111	.	+	.	ID=gene3268;Dbxref=GeneID:3798404;Name=yraO;Note=SDY3328;gbkey=Gene;gene=yraO;gene_biotype=protein_coding;locus_tag=SDY_3328
NC_007606.1	RefSeq	CDS	3086521	3087111	.	+	0	ID=cds2896;Parent=gene3268;Dbxref=Genbank:YP_404813.1,GeneID:3798404;Name=YP_404813.1;Note=Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein;gbkey=CDS;gene=yraO;product=chromosome replication initiator DnaA;protein_id=YP_404813.1;transl_table=11
NC_007606.1	RefSeq	gene	3087121	3087696	.	+	.	ID=gene3269;Dbxref=GeneID:3798405;Name=yraP;Note=SDY3329;gbkey=Gene;gene=yraP;gene_biotype=protein_coding;locus_tag=SDY_3329
NC_007606.1	RefSeq	CDS	3087121	3087696	.	+	0	ID=cds2897;Parent=gene3269;Dbxref=Genbank:YP_404814.1,GeneID:3798405;Name=YP_404814.1;Note=Code: R%3B COG: COG2823;gbkey=CDS;gene=yraP;product=hypothetical protein;protein_id=YP_404814.1;transl_table=11
NC_007606.1	RefSeq	gene	3087810	3088850	.	-	.	ID=gene3270;Dbxref=GeneID:3798406;Name=yraQ;Note=''SDY3330%3B contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yraQ;gene_biotype=pseudogene;locus_tag=SDY_3330;pseudo=true
NC_007606.1	RefSeq	gene	3088923	3089603	.	-	.	ID=gene3271;Dbxref=GeneID:3798407;Name=yraR;Note=SDY3331;gbkey=Gene;gene=yraR;gene_biotype=protein_coding;locus_tag=SDY_3331
NC_007606.1	RefSeq	CDS	3088923	3089603	.	-	0	ID=cds2898;Parent=gene3271;Dbxref=Genbank:YP_404815.1,GeneID:3798407;Name=YP_404815.1;Note=Code: MG%3B COG: COG0702;gbkey=CDS;gene=yraR;product=hypothetical protein;protein_id=YP_404815.1;transl_table=11
NC_007606.1	RefSeq	gene	3089644	3090204	.	+	.	ID=gene3272;Dbxref=GeneID:3798408;Name=yhbO;Note=SDY3332;gbkey=Gene;gene=yhbO;gene_biotype=protein_coding;locus_tag=SDY_3332
NC_007606.1	RefSeq	CDS	3089644	3090204	.	+	0	ID=cds2899;Parent=gene3272;Dbxref=Genbank:YP_404816.1,GeneID:3798408;Name=YP_404816.1;Note=Code: R%3B COG: COG0693;gbkey=CDS;gene=yhbO;product=hypothetical protein;protein_id=YP_404816.1;transl_table=11
NC_007606.1	RefSeq	gene	3090184	3090627	.	-	.	ID=gene3273;Dbxref=GeneID:3798409;Name=yhbP;Note=SDY3333;gbkey=Gene;gene=yhbP;gene_biotype=protein_coding;locus_tag=SDY_3333
NC_007606.1	RefSeq	CDS	3090184	3090627	.	-	0	ID=cds2900;Parent=gene3273;Dbxref=Genbank:YP_404817.1,GeneID:3798409;Name=YP_404817.1;Note=Code: S%3B COG: COG3787;gbkey=CDS;gene=yhbP;product=hypothetical protein;protein_id=YP_404817.1;transl_table=11
NC_007606.1	RefSeq	gene	3090678	3090980	.	+	.	ID=gene3274;Dbxref=GeneID:3798410;Name=yhbQ;Note=SDY3334;gbkey=Gene;gene=yhbQ;gene_biotype=protein_coding;locus_tag=SDY_3334
NC_007606.1	RefSeq	CDS	3090678	3090980	.	+	0	ID=cds2901;Parent=gene3274;Dbxref=Genbank:YP_404818.1,GeneID:3798410;Name=YP_404818.1;Note=Code: L%3B COG: COG2827;gbkey=CDS;gene=yhbQ;product=GIY-YIG nuclease superfamily protein;protein_id=YP_404818.1;transl_table=11
NC_007606.1	RefSeq	gene	3090967	3091470	.	-	.	ID=gene3275;Dbxref=GeneID:3798411;Name=yhbS;Note=SDY3335;gbkey=Gene;gene=yhbS;gene_biotype=protein_coding;locus_tag=SDY_3335
NC_007606.1	RefSeq	CDS	3090967	3091470	.	-	0	ID=cds2902;Parent=gene3275;Dbxref=Genbank:YP_404819.1,GeneID:3798411;Name=YP_404819.1;Note=Code: R%3B COG: COG3153;gbkey=CDS;gene=yhbS;product=hypothetical protein;protein_id=YP_404819.1;transl_table=11
NC_007606.1	RefSeq	gene	3091464	3091988	.	-	.	ID=gene3276;Dbxref=GeneID:3798412;Name=yhbT;Note=SDY3336;gbkey=Gene;gene=yhbT;gene_biotype=protein_coding;locus_tag=SDY_3336
NC_007606.1	RefSeq	CDS	3091464	3091988	.	-	0	ID=cds2903;Parent=gene3276;Dbxref=Genbank:YP_404820.1,GeneID:3798412;Name=YP_404820.1;Note=Code: I%3B COG: COG3154;gbkey=CDS;gene=yhbT;product=hypothetical protein;protein_id=YP_404820.1;transl_table=11
NC_007606.1	RefSeq	gene	3092197	3093192	.	+	.	ID=gene3277;Dbxref=GeneID:3798413;Name=yhbU;Note=SDY3337;gbkey=Gene;gene=yhbU;gene_biotype=protein_coding;locus_tag=SDY_3337
NC_007606.1	RefSeq	CDS	3092197	3093192	.	+	0	ID=cds2904;Parent=gene3277;Dbxref=Genbank:YP_404821.1,GeneID:3798413;Name=YP_404821.1;Note=Code: O%3B COG: COG0826;gbkey=CDS;gene=yhbU;product=collagenase;protein_id=YP_404821.1;transl_table=11
NC_007606.1	RefSeq	gene	3093183	3094079	.	+	.	ID=gene3278;Dbxref=GeneID:3798414;Name=yhbV;Note=SDY3338;gbkey=Gene;gene=yhbV;gene_biotype=protein_coding;locus_tag=SDY_3338
NC_007606.1	RefSeq	CDS	3093183	3094079	.	+	0	ID=cds2905;Parent=gene3278;Dbxref=Genbank:YP_404822.1,GeneID:3798414;Name=YP_404822.1;Note=Code: O%3B COG: COG0826;gbkey=CDS;gene=yhbV;product=hypothetical protein;protein_id=YP_404822.1;transl_table=11
NC_007606.1	RefSeq	gene	3094160	3095167	.	+	.	ID=gene3279;Dbxref=GeneID:3798415;Name=yhbW;Note=SDY3339;gbkey=Gene;gene=yhbW;gene_biotype=protein_coding;locus_tag=SDY_3339
NC_007606.1	RefSeq	CDS	3094160	3095167	.	+	0	ID=cds2906;Parent=gene3279;Dbxref=Genbank:YP_404823.1,GeneID:3798415;Name=YP_404823.1;Note=Code: C%3B COG: COG2141;gbkey=CDS;gene=yhbW;product=hypothetical protein;protein_id=YP_404823.1;transl_table=11
NC_007606.1	RefSeq	gene	3095284	3096528	.	-	.	ID=gene3280;Dbxref=GeneID:3798416;Name=mtr;Note=SDY3340;gbkey=Gene;gene=mtr;gene_biotype=protein_coding;locus_tag=SDY_3340
NC_007606.1	RefSeq	CDS	3095284	3096528	.	-	0	ID=cds2907;Parent=gene3280;Dbxref=Genbank:YP_404824.1,GeneID:3798416;Name=YP_404824.1;Note=tryptophan transporter of high affinity;gbkey=CDS;gene=mtr;product=tryptophan permease;protein_id=YP_404824.1;transl_table=11
NC_007606.1	RefSeq	gene	3096682	3098571	.	-	.	ID=gene3281;Dbxref=GeneID:3798417;Name=deaD;Note=SDY3341;gbkey=Gene;gene=deaD;gene_biotype=protein_coding;locus_tag=SDY_3341
NC_007606.1	RefSeq	CDS	3096682	3098571	.	-	0	ID=cds2908;Parent=gene3281;Dbxref=Genbank:YP_404825.2,GeneID:3798417;Name=YP_404825.2;Note=participates in the assembly of the large subunit of the ribosome%3B plays a key role in optimal cell growth at low temperature and is required for normal cell division;gbkey=CDS;gene=deaD;product=ATP-dependent RNA helicase DeaD;protein_id=YP_404825.2;transl_table=11
NC_007606.1	RefSeq	gene	3098751	3099635	.	-	.	ID=gene3282;Dbxref=GeneID:3798418;Name=yhbM;Note=SDY3342;gbkey=Gene;gene=yhbM;gene_biotype=protein_coding;locus_tag=SDY_3342
NC_007606.1	RefSeq	CDS	3098751	3099635	.	-	0	ID=cds2909;Parent=gene3282;Dbxref=Genbank:YP_404826.1,GeneID:3798418;Name=YP_404826.1;Note=lipoprotein that appears to be involved in cell division%3B interacts with the periplasmic protease Prc and may be activated by protease processing;gbkey=CDS;gene=yhbM;product=lipoprotein NlpI;protein_id=YP_404826.1;transl_table=11
NC_007606.1	RefSeq	gene	3099744	3101948	.	-	.	ID=gene3283;Dbxref=GeneID:3798419;Name=pnp;Note=SDY3343;gbkey=Gene;gene=pnp;gene_biotype=protein_coding;locus_tag=SDY_3343
NC_007606.1	RefSeq	CDS	3099744	3101948	.	-	0	ID=cds2910;Parent=gene3283;Dbxref=Genbank:YP_404827.1,GeneID:3798419;Name=YP_404827.1;Note=Code: J%3B COG: COG1185;gbkey=CDS;gene=pnp;product=polynucleotide phosphorylase;protein_id=YP_404827.1;transl_table=11
NC_007606.1	RefSeq	gene	3102126	3102395	.	-	.	ID=gene3284;Dbxref=GeneID:3798420;Name=rpsO;Note=SDY3344;gbkey=Gene;gene=rpsO;gene_biotype=protein_coding;locus_tag=SDY_3344
NC_007606.1	RefSeq	CDS	3102126	3102395	.	-	0	ID=cds2911;Parent=gene3284;Dbxref=Genbank:YP_404828.1,GeneID:3798420;Name=YP_404828.1;Note=primary rRNA binding protein%3B helps nucleate assembly of 30S%3B binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA%3B autoregulates translation through interactions with the mRNA leader sequence;gbkey=CDS;gene=rpsO;product=30S ribosomal protein S15;protein_id=YP_404828.1;transl_table=11
NC_007606.1	RefSeq	gene	3102544	3103488	.	-	.	ID=gene3285;Dbxref=GeneID:3798421;Name=truB;Note=SDY3345;gbkey=Gene;gene=truB;gene_biotype=protein_coding;locus_tag=SDY_3345
NC_007606.1	RefSeq	CDS	3102544	3103488	.	-	0	ID=cds2912;Parent=gene3285;Dbxref=Genbank:YP_404829.1,GeneID:3798421;Name=YP_404829.1;Note=catalyzes isomerization of specific uridines in RNA to pseudouridine%3B responsible for residues in T loops of many tRNAs;gbkey=CDS;gene=truB;product=tRNA pseudouridine synthase B;protein_id=YP_404829.1;transl_table=11
NC_007606.1	RefSeq	gene	3103488	3103889	.	-	.	ID=gene3286;Dbxref=GeneID:3798422;Name=rbfA;Note=SDY3346;gbkey=Gene;gene=rbfA;gene_biotype=protein_coding;locus_tag=SDY_3346
NC_007606.1	RefSeq	CDS	3103488	3103889	.	-	0	ID=cds2913;Parent=gene3286;Dbxref=Genbank:YP_404830.1,GeneID:3798422;Name=YP_404830.1;Note=associates with free 30S ribosomal subunits%3B essential for efficient processing of 16S rRNA%3B in Escherichia coli rbfA is induced by cold shock;gbkey=CDS;gene=rbfA;product=ribosome-binding factor A;protein_id=YP_404830.1;transl_table=11
NC_007606.1	RefSeq	gene	3104053	3106725	.	-	.	ID=gene3287;Dbxref=GeneID:3798423;Name=infB;Note=SDY3347;gbkey=Gene;gene=infB;gene_biotype=protein_coding;locus_tag=SDY_3347
NC_007606.1	RefSeq	CDS	3104053	3106725	.	-	0	ID=cds2914;Parent=gene3287;Dbxref=Genbank:YP_404831.1,GeneID:3798423;Name=YP_404831.1;Note=Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex;gbkey=CDS;gene=infB;product=translation initiation factor IF-2;protein_id=YP_404831.1;transl_table=11
NC_007606.1	RefSeq	gene	3106750	3108237	.	-	.	ID=gene3288;Dbxref=GeneID:3798424;Name=nusA;Note=SDY3348;gbkey=Gene;gene=nusA;gene_biotype=protein_coding;locus_tag=SDY_3348
NC_007606.1	RefSeq	CDS	3106750	3108237	.	-	0	ID=cds2915;Parent=gene3288;Dbxref=Genbank:YP_404832.1,GeneID:3798424;Name=YP_404832.1;Note=''modifies transcription through interactions with RNA polymerase affecting elongation%2C readthrough%2C termination%2C and antitermination'';gbkey=CDS;gene=nusA;product=transcription elongation factor NusA;protein_id=YP_404832.1;transl_table=11
NC_007606.1	RefSeq	gene	3108265	3108717	.	-	.	ID=gene3289;Dbxref=GeneID:3798425;Name=yhbC;Note=SDY3349;gbkey=Gene;gene=yhbC;gene_biotype=protein_coding;locus_tag=SDY_3349
NC_007606.1	RefSeq	CDS	3108265	3108717	.	-	0	ID=cds2916;Parent=gene3289;Dbxref=Genbank:YP_404833.2,GeneID:3798425;Name=YP_404833.2;Note=in Streptococcus pneumoniae this gene was found to be essential%3B structure determination of the Streptococcus protein shows that it is similar to a number of other proteins;gbkey=CDS;gene=yhbC;product=hypothetical protein;protein_id=YP_404833.2;transl_table=11
NC_007606.1	RefSeq	gene	3108924	3109000	.	-	.	ID=gene3290;Dbxref=GeneID:3798426;Name=SDY_3350;Note=SDY3350;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3350
NC_007606.1	RefSeq	tRNA	3108924	3109000	.	-	.	ID=rna60;Parent=gene3290;Dbxref=GeneID:3798426;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	exon	3108924	3109000	.	-	.	ID=id527;Parent=rna60;Dbxref=GeneID:3798426;codons=35;gbkey=tRNA;product=tRNA-Met
NC_007606.1	RefSeq	gene	3109348	3110691	.	+	.	ID=gene3291;Dbxref=GeneID:3798766;Name=argG;Note=SDY3351;gbkey=Gene;gene=argG;gene_biotype=protein_coding;locus_tag=SDY_3351
NC_007606.1	RefSeq	CDS	3109348	3110691	.	+	0	ID=cds2917;Parent=gene3291;Dbxref=Genbank:YP_404834.1,GeneID:3798766;Name=YP_404834.1;Note=catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis;gbkey=CDS;gene=argG;product=argininosuccinate synthase;protein_id=YP_404834.1;transl_table=11
NC_007606.1	RefSeq	gene	3110699	3112306	.	-	.	ID=gene3292;Dbxref=GeneID:3798767;Name=yhbX;Note=SDY3352;gbkey=Gene;gene=yhbX;gene_biotype=protein_coding;locus_tag=SDY_3352
NC_007606.1	RefSeq	CDS	3110699	3112306	.	-	0	ID=cds2918;Parent=gene3292;Dbxref=Genbank:YP_404835.2,GeneID:3798767;Name=YP_404835.2;Note=Code: R%3B COG: COG2194;gbkey=CDS;gene=yhbX;product=alkaline phosphatase I;protein_id=YP_404835.2;transl_table=11
NC_007606.1	RefSeq	region	3112363	3113129	.	-	.	ID=id528;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3112377	3112773	.	-	.	ID=gene3293;Dbxref=GeneID:3798768;Name=SDY_3353;Note=SDY3353;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3353;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	3112800	3113072	.	-	.	ID=gene3294;Dbxref=GeneID:18263141;Name=SDY_4754;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4754
NC_007606.1	RefSeq	CDS	3112800	3113072	.	-	0	ID=cds2919;Parent=gene3294;Dbxref=Genbank:YP_009000827.1,GeneID:18263141;Name=YP_009000827.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000827.1;transl_table=11
NC_007606.1	RefSeq	gene	3113477	3113563	.	-	.	ID=gene3295;Dbxref=GeneID:3798770;Name=SDY_3355;Note=SDY3355;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3355
NC_007606.1	RefSeq	tRNA	3113477	3113563	.	-	.	ID=rna61;Parent=gene3295;Dbxref=GeneID:3798770;codons=17;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	exon	3113477	3113563	.	-	.	ID=id529;Parent=rna61;Dbxref=GeneID:3798770;codons=17;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	gene	3113578	3113910	.	-	.	ID=gene3296;Dbxref=GeneID:3798771;Name=secG;Note=SDY3356;gbkey=Gene;gene=secG;gene_biotype=protein_coding;locus_tag=SDY_3356
NC_007606.1	RefSeq	CDS	3113578	3113910	.	-	0	ID=cds2920;Parent=gene3296;Dbxref=Genbank:YP_404838.1,GeneID:3798771;Name=YP_404838.1;Note=Code: U%3B COG: COG1314;gbkey=CDS;gene=secG;product=preprotein translocase subunit SecG;protein_id=YP_404838.1;transl_table=11
NC_007606.1	RefSeq	gene	3114138	3115475	.	-	.	ID=gene3297;Dbxref=GeneID:3798772;Name=glmM;Note=SDY3357;gbkey=Gene;gene=glmM;gene_biotype=protein_coding;locus_tag=SDY_3357
NC_007606.1	RefSeq	CDS	3114138	3115475	.	-	0	ID=cds2921;Parent=gene3297;Dbxref=Genbank:YP_404839.1,GeneID:3798772;Name=YP_404839.1;Note=catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate;gbkey=CDS;gene=glmM;product=phosphoglucosamine mutase;protein_id=YP_404839.1;transl_table=11
NC_007606.1	RefSeq	gene	3115468	3116316	.	-	.	ID=gene3298;Dbxref=GeneID:3798773;Name=folP;Note=SDY3358;gbkey=Gene;gene=folP;gene_biotype=protein_coding;locus_tag=SDY_3358
NC_007606.1	RefSeq	CDS	3115468	3116316	.	-	0	ID=cds2922;Parent=gene3298;Dbxref=Genbank:YP_404840.2,GeneID:3798773;Name=YP_404840.2;Note=''catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7%2C8-dihydropteridine diphosphate and 4-aminobenzoate'';gbkey=CDS;gene=folP;product=dihydropteroate synthase;protein_id=YP_404840.2;transl_table=11
NC_007606.1	RefSeq	gene	3116406	3118340	.	-	.	ID=gene3299;Dbxref=GeneID:3798774;Name=hflB;Note=SDY3359;gbkey=Gene;gene=hflB;gene_biotype=protein_coding;gene_synonym=ftsH;locus_tag=SDY_3359
NC_007606.1	RefSeq	CDS	3116406	3118340	.	-	0	ID=cds2923;Parent=gene3299;Dbxref=Genbank:YP_404841.1,GeneID:3798774;Name=YP_404841.1;Note=inner membrane metalloprotease%3B may be involved in degradation of aberrant cytoplasmic and membrane proteins;gbkey=CDS;gene=hflB;product=ATP-dependent metalloprotease;protein_id=YP_404841.1;transl_table=11
NC_007606.1	RefSeq	gene	3118440	3119069	.	-	.	ID=gene3300;Dbxref=GeneID:3798775;Name=rrmJ;Note=SDY3360;gbkey=Gene;gene=rrmJ;gene_biotype=protein_coding;locus_tag=SDY_3360
NC_007606.1	RefSeq	CDS	3118440	3119069	.	-	0	ID=cds2924;Parent=gene3300;Dbxref=Genbank:YP_404842.1,GeneID:3798775;Name=YP_404842.1;Note=Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit;gbkey=CDS;gene=rrmJ;product=23S rRNA methyltransferase;protein_id=YP_404842.1;transl_table=11
NC_007606.1	RefSeq	gene	3119195	3119488	.	+	.	ID=gene3301;Dbxref=GeneID:3798776;Name=yhbY;Note=SDY3361;gbkey=Gene;gene=yhbY;gene_biotype=protein_coding;locus_tag=SDY_3361
NC_007606.1	RefSeq	CDS	3119195	3119488	.	+	0	ID=cds2925;Parent=gene3301;Dbxref=Genbank:YP_404843.1,GeneID:3798776;Name=YP_404843.1;Note=RNA binding protein found associated to pre-50S subunit of the ribosome%3B role in ribosome assembly%3B necessary for optimal growth but not cell viability;gbkey=CDS;gene=yhbY;product=RNA-binding protein YhbY;protein_id=YP_404843.1;transl_table=11
NC_007606.1	RefSeq	gene	3119645	3120121	.	-	.	ID=gene3302;Dbxref=GeneID:3798777;Name=greA;Note=SDY3362;gbkey=Gene;gene=greA;gene_biotype=protein_coding;locus_tag=SDY_3362
NC_007606.1	RefSeq	CDS	3119645	3120121	.	-	0	ID=cds2926;Parent=gene3302;Dbxref=Genbank:YP_404844.2,GeneID:3798777;Name=YP_404844.2;Note=''necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus'';gbkey=CDS;gene=greA;product=transcription elongation factor GreA;protein_id=YP_404844.2;transl_table=11
NC_007606.1	RefSeq	gene	3120368	3121801	.	+	.	ID=gene3303;Dbxref=GeneID:3798778;Name=dacB;Note=SDY3363;gbkey=Gene;gene=dacB;gene_biotype=protein_coding;locus_tag=SDY_3363
NC_007606.1	RefSeq	CDS	3120368	3121801	.	+	0	ID=cds2927;Parent=gene3303;Dbxref=Genbank:YP_404845.1,GeneID:3798778;Name=YP_404845.1;Note=''penicillin binding protein 4%3B penicillin sensitive%3B catalyzes the formation of D-alanine from D-alanyl-D-alanine%3B one of four%2C DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains'';gbkey=CDS;gene=dacB;product=D-alanyl-D-alanine carboxypeptidase;protein_id=YP_404845.1;transl_table=11
NC_007606.1	RefSeq	gene	3121841	3123013	.	-	.	ID=gene3304;Dbxref=GeneID:3798779;Name=obgE;Note=SDY3364;gbkey=Gene;gene=obgE;gene_biotype=protein_coding;gene_synonym=cgtA,obg,yhbZ;locus_tag=SDY_3364
NC_007606.1	RefSeq	CDS	3121841	3123013	.	-	0	ID=cds2928;Parent=gene3304;Dbxref=Genbank:YP_404846.1,GeneID:3798779;Name=YP_404846.1;Note=essential GTPase%3B exhibits high exchange rate for GTP/GDP%3B associates with 50S ribosomal subunit%3B involved in regulation of chromosomal replication;gbkey=CDS;gene=obgE;product=GTPase ObgE;protein_id=YP_404846.1;transl_table=11
NC_007606.1	RefSeq	gene	3123029	3123994	.	-	.	ID=gene3305;Dbxref=GeneID:3798780;Name=yhbE;Note=SDY3365;gbkey=Gene;gene=yhbE;gene_biotype=protein_coding;locus_tag=SDY_3365
NC_007606.1	RefSeq	CDS	3123029	3123994	.	-	0	ID=cds2929;Parent=gene3305;Dbxref=Genbank:YP_404847.1,GeneID:3798780;Name=YP_404847.1;Note=Code: GER%3B COG: COG0697;gbkey=CDS;gene=yhbE;product=hypothetical protein;protein_id=YP_404847.1;transl_table=11
NC_007606.1	RefSeq	gene	3124121	3124378	.	-	.	ID=gene3306;Dbxref=GeneID:3798781;Name=rpmA;Note=SDY3366;gbkey=Gene;gene=rpmA;gene_biotype=protein_coding;locus_tag=SDY_3366
NC_007606.1	RefSeq	CDS	3124121	3124378	.	-	0	ID=cds2930;Parent=gene3306;Dbxref=Genbank:YP_404848.1,GeneID:3798781;Name=YP_404848.1;Note=involved in the peptidyltransferase reaction during translation;gbkey=CDS;gene=rpmA;product=50S ribosomal protein L27;protein_id=YP_404848.1;transl_table=11
NC_007606.1	RefSeq	gene	3124399	3124710	.	-	.	ID=gene3307;Dbxref=GeneID:3798782;Name=rplU;Note=SDY3367;gbkey=Gene;gene=rplU;gene_biotype=protein_coding;locus_tag=SDY_3367
NC_007606.1	RefSeq	CDS	3124399	3124710	.	-	0	ID=cds2931;Parent=gene3307;Dbxref=Genbank:YP_404849.1,GeneID:3798782;Name=YP_404849.1;Note=Code: J%3B COG: COG0261;gbkey=CDS;gene=rplU;product=50S ribosomal protein L21;protein_id=YP_404849.1;transl_table=11
NC_007606.1	RefSeq	gene	3124968	3125939	.	+	.	ID=gene3308;Dbxref=GeneID:3796558;Name=ispB;Note=SDY3368;gbkey=Gene;gene=ispB;gene_biotype=protein_coding;locus_tag=SDY_3368
NC_007606.1	RefSeq	CDS	3124968	3125939	.	+	0	ID=cds2932;Parent=gene3308;Dbxref=Genbank:YP_404850.1,GeneID:3796558;Name=YP_404850.1;Note=Code: H%3B COG: COG0142;gbkey=CDS;gene=ispB;product=octaprenyl diphosphate synthase;protein_id=YP_404850.1;transl_table=11
NC_007606.1	RefSeq	gene	3126167	3126445	.	+	.	ID=gene3309;Dbxref=GeneID:3796559;Name=nlp;Note=SDY3369;gbkey=Gene;gene=nlp;gene_biotype=protein_coding;locus_tag=SDY_3369
NC_007606.1	RefSeq	CDS	3126167	3126445	.	+	0	ID=cds2933;Parent=gene3309;Dbxref=Genbank:YP_404851.1,GeneID:3796559;Name=YP_404851.1;Note=activator of maltose metabolism genes;gbkey=CDS;gene=nlp;product=DNA-binding transcriptional regulator Nlp;protein_id=YP_404851.1;transl_table=11
NC_007606.1	RefSeq	gene	3126493	3127752	.	-	.	ID=gene3310;Dbxref=GeneID:3796560;Name=murA;Note=SDY3370;gbkey=Gene;gene=murA;gene_biotype=protein_coding;locus_tag=SDY_3370
NC_007606.1	RefSeq	CDS	3126493	3127752	.	-	0	ID=cds2934;Parent=gene3310;Dbxref=Genbank:YP_404852.1,GeneID:3796560;Name=YP_404852.1;Note=adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation%3B gram-positive bacteria have 2 copies of MurA which are active;gbkey=CDS;gene=murA;product=UDP-N-acetylglucosamine 1-carboxyvinyltransferase;protein_id=YP_404852.1;transl_table=11
NC_007606.1	RefSeq	gene	3127807	3128076	.	-	.	ID=gene3311;Dbxref=GeneID:3796561;Name=yrbA;Note=SDY3371;gbkey=Gene;gene=yrbA;gene_biotype=protein_coding;locus_tag=SDY_3371
NC_007606.1	RefSeq	CDS	3127807	3128076	.	-	0	ID=cds2935;Parent=gene3311;Dbxref=Genbank:YP_404853.1,GeneID:3796561;Name=YP_404853.1;Note=Code: K%3B COG: COG5007;gbkey=CDS;gene=yrbA;product=hypothetical protein;protein_id=YP_404853.1;transl_table=11
NC_007606.1	RefSeq	gene	3128221	3128514	.	-	.	ID=gene3312;Dbxref=GeneID:3796562;Name=yrbB;Note=SDY3372;gbkey=Gene;gene=yrbB;gene_biotype=protein_coding;locus_tag=SDY_3372
NC_007606.1	RefSeq	CDS	3128221	3128514	.	-	0	ID=cds2936;Parent=gene3312;Dbxref=Genbank:YP_404854.2,GeneID:3796562;Name=YP_404854.2;Note=Code: R%3B COG: COG3113;gbkey=CDS;gene=yrbB;product=hypothetical protein;protein_id=YP_404854.2;transl_table=11
NC_007606.1	RefSeq	gene	3128514	3129149	.	-	.	ID=gene3313;Dbxref=GeneID:3796563;Name=yrbC;Note=SDY3373;gbkey=Gene;gene=yrbC;gene_biotype=protein_coding;locus_tag=SDY_3373
NC_007606.1	RefSeq	CDS	3128514	3129149	.	-	0	ID=cds2937;Parent=gene3313;Dbxref=Genbank:YP_404855.1,GeneID:3796563;Name=YP_404855.1;Note=Code: Q%3B COG: COG2854;gbkey=CDS;gene=yrbC;product=hypothetical protein;protein_id=YP_404855.1;transl_table=11
NC_007606.1	RefSeq	gene	3129168	3129719	.	-	.	ID=gene3314;Dbxref=GeneID:3796564;Name=yrbD;Note=SDY3374;gbkey=Gene;gene=yrbD;gene_biotype=protein_coding;locus_tag=SDY_3374
NC_007606.1	RefSeq	CDS	3129168	3129719	.	-	0	ID=cds2938;Parent=gene3314;Dbxref=Genbank:YP_404856.1,GeneID:3796564;Name=YP_404856.1;Note=Code: Q%3B COG: COG1463;gbkey=CDS;gene=yrbD;product=hypothetical protein;protein_id=YP_404856.1;transl_table=11
NC_007606.1	RefSeq	gene	3129724	3130506	.	-	.	ID=gene3315;Dbxref=GeneID:3796565;Name=yrbE;Note=SDY3375;gbkey=Gene;gene=yrbE;gene_biotype=protein_coding;locus_tag=SDY_3375
NC_007606.1	RefSeq	CDS	3129724	3130506	.	-	0	ID=cds2939;Parent=gene3315;Dbxref=Genbank:YP_404857.1,GeneID:3796565;Name=YP_404857.1;Note=Code: Q%3B COG: COG0767;gbkey=CDS;gene=yrbE;product=hypothetical protein;protein_id=YP_404857.1;transl_table=11
NC_007606.1	RefSeq	gene	3130514	3131323	.	-	.	ID=gene3316;Dbxref=GeneID:3796566;Name=yrbF;Note=SDY3376;gbkey=Gene;gene=yrbF;gene_biotype=protein_coding;locus_tag=SDY_3376
NC_007606.1	RefSeq	CDS	3130514	3131323	.	-	0	ID=cds2940;Parent=gene3316;Dbxref=Genbank:YP_404858.1,GeneID:3796566;Name=YP_404858.1;Note=ATP-binding subunit of a  ABC toluene efflux transporter;gbkey=CDS;gene=yrbF;product=ABC transporter ATP-binding protein YrbF;protein_id=YP_404858.1;transl_table=11
NC_007606.1	RefSeq	gene	3131536	3132501	.	+	.	ID=gene3317;Dbxref=GeneID:3796567;Name=yrbG;Note=SDY3377;gbkey=Gene;gene=yrbG;gene_biotype=protein_coding;locus_tag=SDY_3377
NC_007606.1	RefSeq	CDS	3131536	3132501	.	+	0	ID=cds2941;Parent=gene3317;Dbxref=Genbank:YP_404859.1,GeneID:3796567;Name=YP_404859.1;Note=YrbG%3B inner membrane protein involved in cell envelope integrity%3B sodium ion/calcium ion exchanger%3B in E. coli it is non essential for cell viability%3B member of the YRBG family of cation/Ca2+ exchangers;gbkey=CDS;gene=yrbG;product=calcium/sodium:proton antiporter;protein_id=YP_404859.1;transl_table=11
NC_007606.1	RefSeq	gene	3132515	3133501	.	+	.	ID=gene3318;Dbxref=GeneID:3796568;Name=yrbH;Note=SDY3378;gbkey=Gene;gene=yrbH;gene_biotype=protein_coding;locus_tag=SDY_3378
NC_007606.1	RefSeq	CDS	3132515	3133501	.	+	0	ID=cds2942;Parent=gene3318;Dbxref=Genbank:YP_404860.1,GeneID:3796568;Name=YP_404860.1;Note=Code: M%3B COG: COG0794;gbkey=CDS;gene=yrbH;product=D-arabinose 5-phosphate isomerase;protein_id=YP_404860.1;transl_table=11
NC_007606.1	RefSeq	gene	3133522	3134088	.	+	.	ID=gene3319;Dbxref=GeneID:3796569;Name=yrbI;Note=SDY3379;gbkey=Gene;gene=yrbI;gene_biotype=protein_coding;locus_tag=SDY_3379
NC_007606.1	RefSeq	CDS	3133522	3134088	.	+	0	ID=cds2943;Parent=gene3319;Dbxref=Genbank:YP_404861.1,GeneID:3796569;Name=YP_404861.1;Note=forms homotetramers%3B catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate%3B functions in lipopolysaccharide biosynthesis;gbkey=CDS;gene=yrbI;product=3-deoxy-D-manno-octulosonate 8-phosphate phosphatase;protein_id=YP_404861.1;transl_table=11
NC_007606.1	RefSeq	gene	3134085	3134660	.	+	.	ID=gene3320;Dbxref=GeneID:3796570;Name=yrbK;Note=SDY3380;gbkey=Gene;gene=yrbK;gene_biotype=protein_coding;locus_tag=SDY_3380
NC_007606.1	RefSeq	CDS	3134085	3134660	.	+	0	ID=cds2944;Parent=gene3320;Dbxref=Genbank:YP_404862.1,GeneID:3796570;Name=YP_404862.1;Note=Code: S%3B COG: COG3117;gbkey=CDS;gene=yrbK;product=hypothetical protein;protein_id=YP_404862.1;transl_table=11
NC_007606.1	RefSeq	gene	3134629	3135186	.	+	.	ID=gene3321;Dbxref=GeneID:3796571;Name=yhbN;Note=SDY3381;gbkey=Gene;gene=yhbN;gene_biotype=protein_coding;locus_tag=SDY_3381
NC_007606.1	RefSeq	CDS	3134629	3135186	.	+	0	ID=cds2945;Parent=gene3321;Dbxref=Genbank:YP_404863.1,GeneID:3796571;Name=YP_404863.1;Note=''LptA%3B periplasmic binding protein part of a  ABC superfamily of uptake transporters%3B interacts with LptB protein%2C the ATP binding component of the uptake system'';gbkey=CDS;gene=yhbN;product=lipopolysaccharide transport periplasmic protein LptA;protein_id=YP_404863.1;transl_table=11
NC_007606.1	RefSeq	gene	3135193	3135918	.	+	.	ID=gene3322;Dbxref=GeneID:3796572;Name=yhbG;Note=SDY3382;gbkey=Gene;gene=yhbG;gene_biotype=protein_coding;locus_tag=SDY_3382
NC_007606.1	RefSeq	CDS	3135193	3135918	.	+	0	ID=cds2946;Parent=gene3322;Dbxref=Genbank:YP_404864.1,GeneID:3796572;Name=YP_404864.1;Note=Code: R%3B COG: COG1137;gbkey=CDS;gene=yhbG;product=ABC transporter ATP-binding protein YhbG;protein_id=YP_404864.1;transl_table=11
NC_007606.1	RefSeq	gene	3135966	3137399	.	+	.	ID=gene3323;Dbxref=GeneID:3796573;Name=rpoN;Note=SDY3383;gbkey=Gene;gene=rpoN;gene_biotype=protein_coding;locus_tag=SDY_3383
NC_007606.1	RefSeq	CDS	3135966	3137399	.	+	0	ID=cds2947;Parent=gene3323;Dbxref=Genbank:YP_404865.1,GeneID:3796573;Name=YP_404865.1;Note=''sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released%3B sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism%3B the rhizobia often have 2 copies of this sigma factor%3B in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation%3B in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions%2C rpoN1 gene was regulated in response to oxygen'';gbkey=CDS;gene=rpoN;product=RNA polymerase factor sigma-54;protein_id=YP_404865.1;transl_table=11
NC_007606.1	RefSeq	gene	3137422	3137709	.	+	.	ID=gene3324;Dbxref=GeneID:3796574;Name=yhbH;Note=SDY3384;gbkey=Gene;gene=yhbH;gene_biotype=protein_coding;locus_tag=SDY_3384
NC_007606.1	RefSeq	CDS	3137422	3137709	.	+	0	ID=cds2948;Parent=gene3324;Dbxref=Genbank:YP_404866.1,GeneID:3796574;Name=YP_404866.1;Note=YhbH%3B resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase%3B binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization)%3B seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing;gbkey=CDS;gene=yhbH;product=sigma(54) modulation protein;protein_id=YP_404866.1;transl_table=11
NC_007606.1	RefSeq	gene	3137827	3138318	.	+	.	ID=gene3325;Dbxref=GeneID:3796575;Name=ptsN;Note=SDY3385;gbkey=Gene;gene=ptsN;gene_biotype=protein_coding;locus_tag=SDY_3385
NC_007606.1	RefSeq	CDS	3137827	3138318	.	+	0	ID=cds2949;Parent=gene3325;Dbxref=Genbank:YP_404867.1,GeneID:3796575;Name=YP_404867.1;Note=Code: GT%3B COG: COG1762;gbkey=CDS;gene=ptsN;product=PTS system transporter subunit IIA;protein_id=YP_404867.1;transl_table=11
NC_007606.1	RefSeq	gene	3138364	3139218	.	+	.	ID=gene3326;Dbxref=GeneID:3796576;Name=yhbJ;Note=SDY3386;gbkey=Gene;gene=yhbJ;gene_biotype=protein_coding;locus_tag=SDY_3386
NC_007606.1	RefSeq	CDS	3138364	3139218	.	+	0	ID=cds2950;Parent=gene3326;Dbxref=Genbank:YP_404868.1,GeneID:3796576;Name=YP_404868.1;Note=Code: R%3B COG: COG1660;gbkey=CDS;gene=yhbJ;product=hypothetical protein;protein_id=YP_404868.1;transl_table=11
NC_007606.1	RefSeq	gene	3139215	3139487	.	+	.	ID=gene3327;Dbxref=GeneID:3796577;Name=ptsO;Note=SDY3387;gbkey=Gene;gene=ptsO;gene_biotype=protein_coding;locus_tag=SDY_3387
NC_007606.1	RefSeq	CDS	3139215	3139487	.	+	0	ID=cds2951;Parent=gene3327;Dbxref=Genbank:YP_404869.1,GeneID:3796577;Name=YP_404869.1;Note=Code: G%3B COG: COG1925;gbkey=CDS;gene=ptsO;product=phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr);protein_id=YP_404869.1;transl_table=11
NC_007606.1	RefSeq	gene	3139701	3140333	.	+	.	ID=gene3328;Dbxref=GeneID:3796462;Name=yrbL;Note=SDY3388;gbkey=Gene;gene=yrbL;gene_biotype=protein_coding;locus_tag=SDY_3388
NC_007606.1	RefSeq	CDS	3139701	3140333	.	+	0	ID=cds2952;Parent=gene3328;Dbxref=Genbank:YP_404870.1,GeneID:3796462;Name=YP_404870.1;gbkey=CDS;gene=yrbL;product=hypothetical protein;protein_id=YP_404870.1;transl_table=11
NC_007606.1	RefSeq	gene	3140330	3141058	.	-	.	ID=gene3329;Dbxref=GeneID:3796463;Name=mtgA;Note=SDY3389;gbkey=Gene;gene=mtgA;gene_biotype=protein_coding;locus_tag=SDY_3389
NC_007606.1	RefSeq	CDS	3140330	3141058	.	-	0	ID=cds2953;Parent=gene3329;Dbxref=Genbank:YP_404871.1,GeneID:3796463;Name=YP_404871.1;Note=glycosyltransferase%3B polymerizes glycan strands in the peptidoglycan;gbkey=CDS;gene=mtgA;product=monofunctional biosynthetic peptidoglycan transglycosylase;protein_id=YP_404871.1;transl_table=11
NC_007606.1	RefSeq	gene	3141055	3141717	.	-	.	ID=gene3330;Dbxref=GeneID:3796464;Name=yhbL;Note=SDY3390;gbkey=Gene;gene=yhbL;gene_biotype=protein_coding;locus_tag=SDY_3390
NC_007606.1	RefSeq	CDS	3141055	3141717	.	-	0	ID=cds2954;Parent=gene3330;Dbxref=Genbank:YP_404872.1,GeneID:3796464;Name=YP_404872.1;Note=Code: Q%3B COG: COG3155;gbkey=CDS;gene=yhbL;product=isoprenoid biosynthesis protein with amidotransferase-like domain;protein_id=YP_404872.1;transl_table=11
NC_007606.1	RefSeq	gene	3141938	3144274	.	-	.	ID=gene3331;Dbxref=GeneID:3796465;Name=arcB;Note=SDY3391;gbkey=Gene;gene=arcB;gene_biotype=protein_coding;locus_tag=SDY_3391
NC_007606.1	RefSeq	CDS	3141938	3144274	.	-	0	ID=cds2955;Parent=gene3331;Dbxref=Genbank:YP_404873.1,GeneID:3796465;Name=YP_404873.1;Note=sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon%3B hybrid sensory histidine kinase in two-component regulatory system with ArcA;gbkey=CDS;gene=arcB;product=aerobic respiration control sensor protein ArcB;protein_id=YP_404873.1;transl_table=11
NC_007606.1	RefSeq	gene	3144370	3145299	.	-	.	ID=gene3332;Dbxref=GeneID:3796466;Name=yhcC;Note=SDY3392;gbkey=Gene;gene=yhcC;gene_biotype=protein_coding;locus_tag=SDY_3392
NC_007606.1	RefSeq	CDS	3144370	3145299	.	-	0	ID=cds2956;Parent=gene3332;Dbxref=Genbank:YP_404874.1,GeneID:3796466;Name=YP_404874.1;Note=Code: R%3B COG: COG1242;gbkey=CDS;gene=yhcC;product=hypothetical protein;protein_id=YP_404874.1;transl_table=11
NC_007606.1	RefSeq	gene	3145973	3150433	.	+	.	ID=gene3333;Dbxref=GeneID:3796467;Name=gltB;Note=SDY3393;gbkey=Gene;gene=gltB;gene_biotype=protein_coding;locus_tag=SDY_3393
NC_007606.1	RefSeq	CDS	3145973	3150433	.	+	0	ID=cds2957;Parent=gene3333;Dbxref=Genbank:YP_404875.1,GeneID:3796467;Name=YP_404875.1;Note=catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate;gbkey=CDS;gene=gltB;product=glutamate synthase subunit alpha;protein_id=YP_404875.1;transl_table=11
NC_007606.1	RefSeq	gene	3150446	3151864	.	+	.	ID=gene3334;Dbxref=GeneID:3796468;Name=gltD;Note=SDY3394;gbkey=Gene;gene=gltD;gene_biotype=protein_coding;locus_tag=SDY_3394
NC_007606.1	RefSeq	CDS	3150446	3151864	.	+	0	ID=cds2958;Parent=gene3334;Dbxref=Genbank:YP_404876.1,GeneID:3796468;Name=YP_404876.1;Note=''glutamate synthase is composed of subunits alpha and beta%3B beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase%3B provides electrons to the alpha subunit%2C which binds L-glutamine and 2-oxoglutarate and forms L-glutamate'';gbkey=CDS;gene=gltD;product=glutamate synthase subunit beta;protein_id=YP_404876.1;transl_table=11
NC_007606.1	RefSeq	gene	3152048	3153175	.	+	.	ID=gene3335;Dbxref=GeneID:3796469;Name=yhcG;Note=SDY3395;gbkey=Gene;gene=yhcG;gene_biotype=protein_coding;locus_tag=SDY_3395
NC_007606.1	RefSeq	CDS	3152048	3153175	.	+	0	ID=cds2959;Parent=gene3335;Dbxref=Genbank:YP_404877.1,GeneID:3796469;Name=YP_404877.1;Note=Code: S%3B COG: COG4804;gbkey=CDS;gene=yhcG;product=hypothetical protein;protein_id=YP_404877.1;transl_table=11
NC_007606.1	RefSeq	gene	3153235	3153699	.	-	.	ID=gene3336;Dbxref=GeneID:3796470;Name=yhcH;Note=SDY3396;gbkey=Gene;gene=yhcH;gene_biotype=protein_coding;locus_tag=SDY_3396
NC_007606.1	RefSeq	CDS	3153235	3153699	.	-	0	ID=cds2960;Parent=gene3336;Dbxref=Genbank:YP_404878.1,GeneID:3796470;Name=YP_404878.1;Note=Code: G%3B COG: COG2731;gbkey=CDS;gene=yhcH;product=hypothetical protein;protein_id=YP_404878.1;transl_table=11
NC_007606.1	RefSeq	gene	3153696	3154571	.	-	.	ID=gene3337;Dbxref=GeneID:3796471;Name=yhcI;Note=SDY3397;gbkey=Gene;gene=yhcI;gene_biotype=protein_coding;locus_tag=SDY_3397
NC_007606.1	RefSeq	CDS	3153696	3154571	.	-	0	ID=cds2961;Parent=gene3337;Dbxref=Genbank:YP_404879.2,GeneID:3796471;Name=YP_404879.2;Note=catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein;gbkey=CDS;gene=yhcI;product=N-acetylmannosamine kinase;protein_id=YP_404879.2;transl_table=11
NC_007606.1	RefSeq	gene	3154568	3155257	.	-	.	ID=gene3338;Dbxref=GeneID:3796472;Name=yhcJ;Note=SDY3398;gbkey=Gene;gene=yhcJ;gene_biotype=protein_coding;locus_tag=SDY_3398
NC_007606.1	RefSeq	CDS	3154568	3155257	.	-	0	ID=cds2962;Parent=gene3338;Dbxref=Genbank:YP_404880.1,GeneID:3796472;Name=YP_404880.1;Note=Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate;gbkey=CDS;gene=yhcJ;product=N-acetylmannosamine-6-phosphate 2-epimerase;protein_id=YP_404880.1;transl_table=11
NC_007606.1	RefSeq	gene	3155305	3156795	.	-	.	ID=gene3339;Dbxref=GeneID:3796473;Name=nanT;Note=SDY3399;gbkey=Gene;gene=nanT;gene_biotype=protein_coding;locus_tag=SDY_3399
NC_007606.1	RefSeq	CDS	3155305	3156795	.	-	0	ID=cds2963;Parent=gene3339;Dbxref=Genbank:YP_404881.2,GeneID:3796473;Name=YP_404881.2;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=nanT;product=sialic acid transporter;protein_id=YP_404881.2;transl_table=11
NC_007606.1	RefSeq	gene	3156904	3157797	.	-	.	ID=gene3340;Dbxref=GeneID:3796474;Name=nanA;Note=SDY3400;gbkey=Gene;gene=nanA;gene_biotype=protein_coding;locus_tag=SDY_3400
NC_007606.1	RefSeq	CDS	3156904	3157797	.	-	0	ID=cds2964;Parent=gene3340;Dbxref=Genbank:YP_404882.1,GeneID:3796474;Name=YP_404882.1;Note=catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid;gbkey=CDS;gene=nanA;product=N-acetylneuraminate lyase;protein_id=YP_404882.1;transl_table=11
NC_007606.1	RefSeq	gene	3157991	3158782	.	-	.	ID=gene3341;Dbxref=GeneID:3796475;Name=yhcK;Note=SDY3401;gbkey=Gene;gene=yhcK;gene_biotype=protein_coding;locus_tag=SDY_3401
NC_007606.1	RefSeq	CDS	3157991	3158782	.	-	0	ID=cds2965;Parent=gene3341;Dbxref=Genbank:YP_404883.1,GeneID:3796475;Name=YP_404883.1;Note=Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization;gbkey=CDS;gene=yhcK;product=transcriptional regulator NanR;protein_id=YP_404883.1;transl_table=11
NC_007606.1	RefSeq	region	3159086	3159862	.	-	.	ID=id530;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3159957	3160256	.	+	.	ID=gene3342;Dbxref=GeneID:3796477;Name=yhcL;Note=SDY3403%3B truncated%3B original product:  transport protein;gbkey=Gene;gene=yhcL;gene_biotype=pseudogene;locus_tag=SDY_3403;pseudo=true
NC_007606.1	RefSeq	gene	3160299	3160796	.	-	.	ID=gene3343;Dbxref=GeneID:3796478;Name=sspB;Note=SDY3404;gbkey=Gene;gene=sspB;gene_biotype=protein_coding;locus_tag=SDY_3404
NC_007606.1	RefSeq	CDS	3160299	3160796	.	-	0	ID=cds2966;Parent=gene3343;Dbxref=Genbank:YP_404885.1,GeneID:3796478;Name=YP_404885.1;Note=Code: R%3B COG: COG2969;gbkey=CDS;gene=sspB;product=ClpXP protease specificity-enhancing factor;protein_id=YP_404885.1;transl_table=11
NC_007606.1	RefSeq	gene	3160802	3161440	.	-	.	ID=gene3344;Dbxref=GeneID:3796479;Name=sspA;Note=SDY3405;gbkey=Gene;gene=sspA;gene_biotype=protein_coding;locus_tag=SDY_3405
NC_007606.1	RefSeq	CDS	3160802	3161440	.	-	0	ID=cds2967;Parent=gene3344;Dbxref=Genbank:YP_404886.1,GeneID:3796479;Name=YP_404886.1;Note=transcriptional activator%3B required for activation of bacteriophage P1 late promoter%3B induced by starvation;gbkey=CDS;gene=sspA;product=stringent starvation protein A;protein_id=YP_404886.1;transl_table=11
NC_007606.1	RefSeq	gene	3161834	3162226	.	-	.	ID=gene3345;Dbxref=GeneID:3796480;Name=rpsI;Note=SDY3406;gbkey=Gene;gene=rpsI;gene_biotype=protein_coding;locus_tag=SDY_3406
NC_007606.1	RefSeq	CDS	3161834	3162226	.	-	0	ID=cds2968;Parent=gene3345;Dbxref=Genbank:YP_404887.1,GeneID:3796480;Name=YP_404887.1;Note=forms a direct contact with the tRNA during translation;gbkey=CDS;gene=rpsI;product=30S ribosomal protein S9;protein_id=YP_404887.1;transl_table=11
NC_007606.1	RefSeq	gene	3162242	3162670	.	-	.	ID=gene3346;Dbxref=GeneID:3797572;Name=rplM;Note=SDY3407;gbkey=Gene;gene=rplM;gene_biotype=protein_coding;locus_tag=SDY_3407
NC_007606.1	RefSeq	CDS	3162242	3162670	.	-	0	ID=cds2969;Parent=gene3346;Dbxref=Genbank:YP_404888.1,GeneID:3797572;Name=YP_404888.1;Note=in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit;gbkey=CDS;gene=rplM;product=50S ribosomal protein L13;protein_id=YP_404888.1;transl_table=11
NC_007606.1	RefSeq	gene	3162889	3164016	.	-	.	ID=gene3347;Dbxref=GeneID:3797573;Name=yhcM;Note=SDY3408;gbkey=Gene;gene=yhcM;gene_biotype=protein_coding;locus_tag=SDY_3408
NC_007606.1	RefSeq	CDS	3162889	3164016	.	-	0	ID=cds2970;Parent=gene3347;Dbxref=Genbank:YP_404889.1,GeneID:3797573;Name=YP_404889.1;Note=Code: R%3B COG: COG1485;gbkey=CDS;gene=yhcM;product=hypothetical protein;protein_id=YP_404889.1;transl_table=11
NC_007606.1	RefSeq	gene	3164204	3164608	.	+	.	ID=gene3348;Dbxref=GeneID:3797574;Name=yhcB;Note=SDY3409;gbkey=Gene;gene=yhcB;gene_biotype=protein_coding;locus_tag=SDY_3409
NC_007606.1	RefSeq	CDS	3164204	3164608	.	+	0	ID=cds2971;Parent=gene3348;Dbxref=Genbank:YP_404890.1,GeneID:3797574;Name=YP_404890.1;Note=Code: S%3B COG: COG3105;gbkey=CDS;gene=yhcB;product=cytochrome d ubiquinol oxidase subunit III;protein_id=YP_404890.1;transl_table=11
NC_007606.1	RefSeq	gene	3164762	3166129	.	+	.	ID=gene3349;Dbxref=GeneID:3797575;Name=degQ;Note=SDY3410;gbkey=Gene;gene=degQ;gene_biotype=protein_coding;locus_tag=SDY_3410
NC_007606.1	RefSeq	CDS	3164762	3166129	.	+	0	ID=cds2972;Parent=gene3349;Dbxref=Genbank:YP_404891.1,GeneID:3797575;Name=YP_404891.1;Note=Code: O%3B COG: COG0265;gbkey=CDS;gene=degQ;product=serine endoprotease;protein_id=YP_404891.1;transl_table=11
NC_007606.1	RefSeq	gene	3166219	3167286	.	+	.	ID=gene3350;Dbxref=GeneID:3797576;Name=degS;Note=SDY3411;gbkey=Gene;gene=degS;gene_biotype=protein_coding;locus_tag=SDY_3411
NC_007606.1	RefSeq	CDS	3166219	3167286	.	+	0	ID=cds2973;Parent=gene3350;Dbxref=Genbank:YP_404892.1,GeneID:3797576;Name=YP_404892.1;Note=Code: O%3B COG: COG0265;gbkey=CDS;gene=degS;product=serine endoprotease;protein_id=YP_404892.1;transl_table=11
NC_007606.1	RefSeq	gene	3167349	3168287	.	-	.	ID=gene3351;Dbxref=GeneID:3797577;Name=mdh;Note=SDY3412;gbkey=Gene;gene=mdh;gene_biotype=protein_coding;locus_tag=SDY_3412
NC_007606.1	RefSeq	CDS	3167349	3168287	.	-	0	ID=cds2974;Parent=gene3351;Dbxref=Genbank:YP_404893.1,GeneID:3797577;Name=YP_404893.1;Note=oxidizes malate to oxaloacetate;gbkey=CDS;gene=mdh;product=malate dehydrogenase;protein_id=YP_404893.1;transl_table=11
NC_007606.1	RefSeq	gene	3168722	3169192	.	+	.	ID=gene3352;Dbxref=GeneID:3797578;Name=argR;Note=SDY3413;gbkey=Gene;gene=argR;gene_biotype=protein_coding;locus_tag=SDY_3413
NC_007606.1	RefSeq	CDS	3168722	3169192	.	+	0	ID=cds2975;Parent=gene3352;Dbxref=Genbank:YP_404894.1,GeneID:3797578;Name=YP_404894.1;Note=regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes;gbkey=CDS;gene=argR;product=arginine repressor ArgR;protein_id=YP_404894.1;transl_table=11
NC_007606.1	RefSeq	gene	3169557	3169820	.	+	.	ID=gene3353;Dbxref=GeneID:3797579;Name=yhcN;Note=SDY3414;gbkey=Gene;gene=yhcN;gene_biotype=protein_coding;locus_tag=SDY_3414
NC_007606.1	RefSeq	CDS	3169557	3169820	.	+	0	ID=cds2976;Parent=gene3353;Dbxref=Genbank:YP_404895.1,GeneID:3797579;Name=YP_404895.1;gbkey=CDS;gene=yhcN;product=hypothetical protein;protein_id=YP_404895.1;transl_table=11
NC_007606.1	RefSeq	gene	3169876	3170148	.	-	.	ID=gene3354;Dbxref=GeneID:3797580;Name=yhcO;Note=SDY3415;gbkey=Gene;gene=yhcO;gene_biotype=protein_coding;locus_tag=SDY_3415
NC_007606.1	RefSeq	CDS	3169876	3170148	.	-	0	ID=cds2977;Parent=gene3354;Dbxref=Genbank:YP_404896.1,GeneID:3797580;Name=YP_404896.1;Note=Code: K%3B COG: COG2732;gbkey=CDS;gene=yhcO;product=hypothetical protein;protein_id=YP_404896.1;transl_table=11
NC_007606.1	RefSeq	gene	3170240	3172207	.	-	.	ID=gene3355;Dbxref=GeneID:3797581;Name=yhcP;Note=SDY3416;gbkey=Gene;gene=yhcP;gene_biotype=protein_coding;locus_tag=SDY_3416
NC_007606.1	RefSeq	CDS	3170240	3172207	.	-	0	ID=cds2978;Parent=gene3355;Dbxref=Genbank:YP_404897.1,GeneID:3797581;Name=YP_404897.1;Note=with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate;gbkey=CDS;gene=yhcP;product=p-hydroxybenzoic acid efflux subunit AaeB;protein_id=YP_404897.1;transl_table=11
NC_007606.1	RefSeq	gene	3172213	3173145	.	-	.	ID=gene3356;Dbxref=GeneID:3797582;Name=yhcQ;Note=SDY3417;gbkey=Gene;gene=yhcQ;gene_biotype=protein_coding;locus_tag=SDY_3417
NC_007606.1	RefSeq	CDS	3172213	3173145	.	-	0	ID=cds2979;Parent=gene3356;Dbxref=Genbank:YP_404898.1,GeneID:3797582;Name=YP_404898.1;Note=''with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid%2C 6-hydroxy-2-naphthoic and 2-hydroxycinnamate'';gbkey=CDS;gene=yhcQ;product=p-hydroxybenzoic acid efflux subunit AaeA;protein_id=YP_404898.1;transl_table=11
NC_007606.1	RefSeq	gene	3173153	3173356	.	-	.	ID=gene3357;Dbxref=GeneID:3797583;Name=yhcR;Note=SDY3418;gbkey=Gene;gene=yhcR;gene_biotype=protein_coding;locus_tag=SDY_3418
NC_007606.1	RefSeq	CDS	3173153	3173356	.	-	0	ID=cds2980;Parent=gene3357;Dbxref=Genbank:YP_404899.2,GeneID:3797583;Name=YP_404899.2;Note=membrane protein AaeX%3B the gene is a member of the aaeXAB operon;gbkey=CDS;gene=yhcR;product=hypothetical protein;protein_id=YP_404899.2;transl_table=11
NC_007606.1	RefSeq	gene	3173539	3174468	.	+	.	ID=gene3358;Dbxref=GeneID:3797584;Name=qseA;Note=SDY3419;gbkey=Gene;gene=qseA;gene_biotype=protein_coding;locus_tag=SDY_3419
NC_007606.1	RefSeq	CDS	3173539	3174468	.	+	0	ID=cds2981;Parent=gene3358;Dbxref=Genbank:YP_404900.1,GeneID:3797584;Name=YP_404900.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=qseA;product=DNA-binding transcriptional regulator;protein_id=YP_404900.1;transl_table=11
NC_007606.1	RefSeq	gene	3174596	3176041	.	-	.	ID=gene3359;Dbxref=GeneID:3797585;Name=tldD;Note=SDY3420;gbkey=Gene;gene=tldD;gene_biotype=protein_coding;locus_tag=SDY_3420
NC_007606.1	RefSeq	CDS	3174596	3176041	.	-	0	ID=cds2982;Parent=gene3359;Dbxref=Genbank:YP_404901.1,GeneID:3797585;Name=YP_404901.1;Note=''responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17%2C an exported protein that targets the essential topoisomerase II DNA gyrase%3B degrades the E. coli plasmid F-encoded CcdA'';gbkey=CDS;gene=tldD;product=protease TldD;protein_id=YP_404901.1;transl_table=11
NC_007606.1	RefSeq	gene	3176197	3179997	.	-	.	ID=gene3360;Dbxref=GeneID:3797586;Name=yhdRP;Note=SDY3421;gbkey=Gene;gene=yhdRP;gene_biotype=protein_coding;locus_tag=SDY_3421
NC_007606.1	RefSeq	CDS	3176197	3179997	.	-	0	ID=cds2983;Parent=gene3360;Dbxref=Genbank:YP_404902.1,GeneID:3797586;Name=YP_404902.1;Note=Code: S%3B COG: COG3164;gbkey=CDS;gene=yhdRP;product=hypothetical protein;protein_id=YP_404902.1;transl_table=11
NC_007606.1	RefSeq	gene	3180065	3181534	.	-	.	ID=gene3361;Dbxref=GeneID:3797587;Name=cafA;Note=SDY3422;gbkey=Gene;gene=cafA;gene_biotype=protein_coding;locus_tag=SDY_3422
NC_007606.1	RefSeq	CDS	3180065	3181534	.	-	0	ID=cds2984;Parent=gene3361;Dbxref=Genbank:YP_404903.2,GeneID:3797587;Name=YP_404903.2;Note=involved in the processing of the 5'end of 16S rRNA;gbkey=CDS;gene=cafA;product=ribonuclease G;protein_id=YP_404903.2;transl_table=11
NC_007606.1	RefSeq	gene	3181524	3182117	.	-	.	ID=gene3362;Dbxref=GeneID:3797588;Name=yhdE;Note=SDY3423;gbkey=Gene;gene=yhdE;gene_biotype=protein_coding;locus_tag=SDY_3423
NC_007606.1	RefSeq	CDS	3181524	3182117	.	-	0	ID=cds2985;Parent=gene3362;Dbxref=Genbank:YP_404904.1,GeneID:3797588;Name=YP_404904.1;Note=Maf%3B overexpression in Bacillus subtilis inhibits septation in the dividing cell;gbkey=CDS;gene=yhdE;product=Maf-like protein;protein_id=YP_404904.1;transl_table=11
NC_007606.1	RefSeq	gene	3182126	3182614	.	-	.	ID=gene3363;Dbxref=GeneID:3797589;Name=mreD;Note=SDY3424;gbkey=Gene;gene=mreD;gene_biotype=protein_coding;locus_tag=SDY_3424
NC_007606.1	RefSeq	CDS	3182126	3182614	.	-	0	ID=cds2986;Parent=gene3363;Dbxref=Genbank:YP_404905.1,GeneID:3797589;Name=YP_404905.1;Note=part of cell wall structural complex MreBCD%3B transmembrane component;gbkey=CDS;gene=mreD;product=rod shape-determining protein MreD;protein_id=YP_404905.1;transl_table=11
NC_007606.1	RefSeq	gene	3182614	3183717	.	-	.	ID=gene3364;Dbxref=GeneID:3797590;Name=mreC;Note=SDY3425;gbkey=Gene;gene=mreC;gene_biotype=protein_coding;locus_tag=SDY_3425
NC_007606.1	RefSeq	CDS	3182614	3183717	.	-	0	ID=cds2987;Parent=gene3364;Dbxref=Genbank:YP_404906.1,GeneID:3797590;Name=YP_404906.1;Note=in some organisms this protein is a transmembrane protein while in others it is periplasmic%3B involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall;gbkey=CDS;gene=mreC;product=rod shape-determining protein MreC;protein_id=YP_404906.1;transl_table=11
NC_007606.1	RefSeq	gene	3183783	3184826	.	-	.	ID=gene3365;Dbxref=GeneID:3797591;Name=mreB;Note=SDY3426;gbkey=Gene;gene=mreB;gene_biotype=protein_coding;locus_tag=SDY_3426
NC_007606.1	RefSeq	CDS	3183783	3184826	.	-	0	ID=cds2988;Parent=gene3365;Dbxref=Genbank:YP_404907.2,GeneID:3797591;Name=YP_404907.2;Note=functions in MreBCD complex in some organisms;gbkey=CDS;gene=mreB;product=rod shape-determining protein MreB;protein_id=YP_404907.2;transl_table=11
NC_007606.1	RefSeq	gene	3185131	3187071	.	-	.	ID=gene3366;Dbxref=GeneID:3797729;Name=yhdA;Note=SDY3427;gbkey=Gene;gene=yhdA;gene_biotype=protein_coding;locus_tag=SDY_3427
NC_007606.1	RefSeq	CDS	3185131	3187071	.	-	0	ID=cds2989;Parent=gene3366;Dbxref=Genbank:YP_404908.1,GeneID:3797729;Name=YP_404908.1;Note=regulates the degradation of the small RNAs CsrB and CsrC%3B may function to targate RNase E to specific RNA molecules;gbkey=CDS;gene=yhdA;product=regulatory protein CsrD;protein_id=YP_404908.1;transl_table=11
NC_007606.1	RefSeq	gene	3187223	3188197	.	+	.	ID=gene3367;Dbxref=GeneID:3797730;Name=yhdH;Note=SDY3428;gbkey=Gene;gene=yhdH;gene_biotype=protein_coding;locus_tag=SDY_3428
NC_007606.1	RefSeq	CDS	3187223	3188197	.	+	0	ID=cds2990;Parent=gene3367;Dbxref=Genbank:YP_404909.1,GeneID:3797730;Name=YP_404909.1;Note=Code: CR%3B COG: COG0604;gbkey=CDS;gene=yhdH;product=dehydrogenase;protein_id=YP_404909.1;transl_table=11
NC_007606.1	RefSeq	gene	3188255	3188356	.	-	.	ID=gene3368;Dbxref=GeneID:3797732;Name=SDY_3430;Note=SDY3430;gbkey=Gene;gene_biotype=other;locus_tag=SDY_3430
NC_007606.1	RefSeq	gene	3188339	3189064	.	+	.	ID=gene3369;Dbxref=GeneID:3797731;Name=SDY_3429;Note=SDY3429;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3429
NC_007606.1	RefSeq	CDS	3188339	3189064	.	+	0	ID=cds2991;Parent=gene3369;Dbxref=Genbank:YP_404911.1,GeneID:3797731;Name=YP_404911.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_404911.1;transl_table=11
NC_007606.1	RefSeq	gene	3189930	3190400	.	+	.	ID=gene3370;Dbxref=GeneID:3797734;Name=accB;Note=SDY3432;gbkey=Gene;gene=accB;gene_biotype=protein_coding;locus_tag=SDY_3432
NC_007606.1	RefSeq	CDS	3189930	3190400	.	+	0	ID=cds2992;Parent=gene3370;Dbxref=Genbank:YP_404913.1,GeneID:3797734;Name=YP_404913.1;Note=''composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex%2C the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism'';gbkey=CDS;gene=accB;product=acetyl-CoA carboxylase biotin carboxyl carrier protein subunit;protein_id=YP_404913.1;transl_table=11
NC_007606.1	RefSeq	gene	3190411	3191760	.	+	.	ID=gene3371;Dbxref=GeneID:3797735;Name=accC;Note=SDY3433;gbkey=Gene;gene=accC;gene_biotype=protein_coding;locus_tag=SDY_3433
NC_007606.1	RefSeq	CDS	3190411	3191760	.	+	0	ID=cds2993;Parent=gene3371;Dbxref=Genbank:YP_404914.1,GeneID:3797735;Name=YP_404914.1;Note=''an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase%2C an enzyme that catalyzes the formation of malonyl-CoA%2C which in turn controls the rate of fatty acid metabolism'';gbkey=CDS;gene=accC;product=acetyl-CoA carboxylase biotin carboxylase subunit;protein_id=YP_404914.1;transl_table=11
NC_007606.1	RefSeq	gene	3191869	3192111	.	+	.	ID=gene3372;Dbxref=GeneID:3797736;Name=yhdT;Note=SDY3434;gbkey=Gene;gene=yhdT;gene_biotype=protein_coding;locus_tag=SDY_3434
NC_007606.1	RefSeq	CDS	3191869	3192111	.	+	0	ID=cds2994;Parent=gene3372;Dbxref=Genbank:YP_404915.1,GeneID:3797736;Name=YP_404915.1;Note=Code: S%3B COG: COG3924;gbkey=CDS;gene=yhdT;product=hypothetical protein;protein_id=YP_404915.1;transl_table=11
NC_007606.1	RefSeq	gene	3192101	3193552	.	+	.	ID=gene3373;Dbxref=GeneID:3797737;Name=panF;Note=SDY3435;gbkey=Gene;gene=panF;gene_biotype=protein_coding;locus_tag=SDY_3435
NC_007606.1	RefSeq	CDS	3192101	3193552	.	+	0	ID=cds2995;Parent=gene3373;Dbxref=Genbank:YP_404916.2,GeneID:3797737;Name=YP_404916.2;Note=mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions%3B member of SSS family of sodium/solute symporters%3B the imported panthothenate is phosphorylated by panthothenate kinase;gbkey=CDS;gene=panF;product=sodium/panthothenate symporter;protein_id=YP_404916.2;transl_table=11
NC_007606.1	RefSeq	gene	3193564	3194445	.	+	.	ID=gene3374;Dbxref=GeneID:3797738;Name=prmA;Note=SDY3436;gbkey=Gene;gene=prmA;gene_biotype=protein_coding;locus_tag=SDY_3436
NC_007606.1	RefSeq	CDS	3193564	3194445	.	+	0	ID=cds2996;Parent=gene3374;Dbxref=Genbank:YP_404917.1,GeneID:3797738;Name=YP_404917.1;Note=methylates ribosomal protein L11 at multiple amino acid positions%3B mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype;gbkey=CDS;gene=prmA;product=50S ribosomal protein L11 methyltransferase;protein_id=YP_404917.1;transl_table=11
NC_007606.1	RefSeq	gene	3194774	3195739	.	+	.	ID=gene3375;Dbxref=GeneID:3797739;Name=yhdG;Note=SDY3437;gbkey=Gene;gene=yhdG;gene_biotype=protein_coding;locus_tag=SDY_3437
NC_007606.1	RefSeq	CDS	3194774	3195739	.	+	0	ID=cds2997;Parent=gene3375;Dbxref=Genbank:YP_404918.1,GeneID:3797739;Name=YP_404918.1;Note=Code: J%3B COG: COG0042;gbkey=CDS;gene=yhdG;product=tRNA-dihydrouridine synthase B;protein_id=YP_404918.1;transl_table=11
NC_007606.1	RefSeq	gene	3195765	3196061	.	+	.	ID=gene3376;Dbxref=GeneID:3797740;Name=fis;Note=SDY3438;gbkey=Gene;gene=fis;gene_biotype=protein_coding;locus_tag=SDY_3438
NC_007606.1	RefSeq	CDS	3195765	3196061	.	+	0	ID=cds2998;Parent=gene3376;Dbxref=Genbank:YP_404919.1,GeneID:3797740;Name=YP_404919.1;Note=Stimulates excision of phage lambda%3B affects Mu development%3B acts as an activator of rRNA and iRNA transcription;gbkey=CDS;gene=fis;product=Fis family transcriptional regulator;protein_id=YP_404919.1;transl_table=11
NC_007606.1	RefSeq	gene	3196141	3196749	.	+	.	ID=gene3377;Dbxref=GeneID:3797741;Name=yhdJ;Note=SDY3439%3B truncated%3B original product:  methyltransferase;gbkey=Gene;gene=yhdJ;gene_biotype=pseudogene;locus_tag=SDY_3439;pseudo=true
NC_007606.1	RefSeq	region	3196723	3197490	.	+	.	ID=id531;gbkey=mobile_element;gene=yhdJ
NC_007606.1	RefSeq	gene	3196778	3197053	.	+	.	ID=gene3378;Dbxref=GeneID:3797742;Name=insA;Note=SDY3440;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3440
NC_007606.1	RefSeq	CDS	3196778	3197053	.	+	0	ID=cds2999;Parent=gene3378;Dbxref=Genbank:YP_404920.1,GeneID:3797742;Name=YP_404920.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_404920.1;transl_table=11
NC_007606.1	RefSeq	gene	3197098	3197475	.	+	.	ID=gene3379;Dbxref=GeneID:3797743;Name=insB;Note=SDY3441;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3441
NC_007606.1	RefSeq	CDS	3197098	3197475	.	+	0	ID=cds3000;Parent=gene3379;Dbxref=Genbank:YP_404921.1,GeneID:3797743;Name=YP_404921.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_404921.1;transl_table=11
NC_007606.1	RefSeq	gene	3197615	3198517	.	+	.	ID=gene3380;Dbxref=GeneID:3797744;Name=acrE;Note=SDY3442%3B truncated%3B original product: transmembrane protein affects septum formation and cell membrane permeability;gbkey=Gene;gene=acrE;gene_biotype=pseudogene;locus_tag=SDY_3442;pseudo=true
NC_007606.1	RefSeq	gene	3198529	3200795	.	+	.	ID=gene3381;Dbxref=GeneID:3797745;Name=SDY_3443;Note=SDY3443;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3443;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	3200715	3201482	.	-	.	ID=id532;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3201152	3201427	.	-	.	ID=gene3382;Dbxref=GeneID:3797746;Name=insA;Note=SDY3444;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3444
NC_007606.1	RefSeq	CDS	3201152	3201427	.	-	0	ID=cds3001;Parent=gene3382;Dbxref=Genbank:YP_404923.1,GeneID:3797746;Name=YP_404923.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_404923.1;transl_table=11
NC_007606.1	RefSeq	gene	3201757	3202674	.	+	.	ID=gene3383;Dbxref=GeneID:3797747;Name=yhdW;Note=SDY3445;gbkey=Gene;gene=yhdW;gene_biotype=protein_coding;locus_tag=SDY_3445
NC_007606.1	RefSeq	CDS	3201757	3202674	.	+	0	ID=cds3002;Parent=gene3383;Dbxref=Genbank:YP_404924.1,GeneID:3797747;Name=YP_404924.1;Note=Code: ET%3B COG: COG0834;gbkey=CDS;gene=yhdW;product=periplasmic binding transport protein;protein_id=YP_404924.1;transl_table=11
NC_007606.1	RefSeq	gene	3202724	3203923	.	+	.	ID=gene3384;Dbxref=GeneID:3798657;Name=yhdX;Note=SDY3446%3B contains in-frame stop codon%3B original product:  transport system permease;gbkey=Gene;gene=yhdX;gene_biotype=pseudogene;locus_tag=SDY_3446;pseudo=true
NC_007606.1	RefSeq	gene	3203930	3205036	.	+	.	ID=gene3385;Dbxref=GeneID:3798658;Name=yhdY;Note=SDY3447;gbkey=Gene;gene=yhdY;gene_biotype=protein_coding;locus_tag=SDY_3447
NC_007606.1	RefSeq	CDS	3203930	3205036	.	+	0	ID=cds3003;Parent=gene3385;Dbxref=Genbank:YP_404925.1,GeneID:3798658;Name=YP_404925.1;Note=Code: E%3B COG: COG0765;gbkey=CDS;gene=yhdY;product=transport system permease;protein_id=YP_404925.1;transl_table=11
NC_007606.1	RefSeq	gene	3205044	3205801	.	+	.	ID=gene3386;Dbxref=GeneID:3798659;Name=yhdZ;Note=SDY3448%3B frameshift%3B original product:  ATP-binding component of a transport system;gbkey=Gene;gene=yhdZ;gene_biotype=pseudogene;locus_tag=SDY_3448;pseudo=true
NC_007606.1	RefSeq	gene	3205862	3205978	.	-	.	ID=gene3387;Dbxref=GeneID:3798660;Name=rrfF;Note=SDY3449;gbkey=Gene;gene=rrfF;gene_biotype=rRNA;locus_tag=SDY_3449
NC_007606.1	RefSeq	rRNA	3205862	3205978	.	-	.	ID=rna62;Parent=gene3387;Dbxref=GeneID:3798660;gbkey=rRNA;gene=rrfF;product=5S ribosomal RNA
NC_007606.1	RefSeq	exon	3205862	3205978	.	-	.	ID=id533;Parent=rna62;Dbxref=GeneID:3798660;gbkey=rRNA;gene=rrfF;product=5S ribosomal RNA
NC_007606.1	RefSeq	gene	3206019	3206094	.	-	.	ID=gene3388;Dbxref=GeneID:3798661;Name=SDY_3450;Note=SDY3450;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3450
NC_007606.1	RefSeq	tRNA	3206019	3206094	.	-	.	ID=rna63;Parent=gene3388;Dbxref=GeneID:3798661;codons=37;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	exon	3206019	3206094	.	-	.	ID=id534;Parent=rna63;Dbxref=GeneID:3798661;codons=37;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	gene	3206107	3206225	.	-	.	ID=gene3389;Dbxref=GeneID:3798662;Name=rrfD;Note=SDY3451;gbkey=Gene;gene=rrfD;gene_biotype=rRNA;locus_tag=SDY_3451
NC_007606.1	RefSeq	rRNA	3206107	3206225	.	-	.	ID=rna64;Parent=gene3389;Dbxref=GeneID:3798662;gbkey=rRNA;gene=rrfD;product=5S ribosomal RNA
NC_007606.1	RefSeq	exon	3206107	3206225	.	-	.	ID=id535;Parent=rna64;Dbxref=GeneID:3798662;gbkey=rRNA;gene=rrfD;product=5S ribosomal RNA
NC_007606.1	RefSeq	gene	3206319	3209220	.	-	.	ID=gene3390;Dbxref=GeneID:3798663;Name=rrlD;Note=SDY3452;gbkey=Gene;gene=rrlD;gene_biotype=rRNA;locus_tag=SDY_3452
NC_007606.1	RefSeq	rRNA	3206319	3209220	.	-	.	ID=rna65;Parent=gene3390;Dbxref=GeneID:3798663;gbkey=rRNA;gene=rrlD;product=23S ribosomal RNA
NC_007606.1	RefSeq	exon	3206319	3209220	.	-	.	ID=id536;Parent=rna65;Dbxref=GeneID:3798663;gbkey=rRNA;gene=rrlD;product=23S ribosomal RNA
NC_007606.1	RefSeq	gene	3209395	3209470	.	-	.	ID=gene3391;Dbxref=GeneID:3798664;Name=SDY_3453;Note=SDY3453;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3453
NC_007606.1	RefSeq	tRNA	3209395	3209470	.	-	.	ID=rna66;Parent=gene3391;Dbxref=GeneID:3798664;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_007606.1	RefSeq	exon	3209395	3209470	.	-	.	ID=id537;Parent=rna66;Dbxref=GeneID:3798664;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_007606.1	RefSeq	gene	3209513	3209589	.	-	.	ID=gene3392;Dbxref=GeneID:3798665;Name=SDY_3454;Note=SDY3454;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3454
NC_007606.1	RefSeq	tRNA	3209513	3209589	.	-	.	ID=rna67;Parent=gene3392;Dbxref=GeneID:3798665;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_007606.1	RefSeq	exon	3209513	3209589	.	-	.	ID=id538;Parent=rna67;Dbxref=GeneID:3798665;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_007606.1	RefSeq	gene	3209658	3211199	.	-	.	ID=gene3393;Dbxref=GeneID:3798666;Name=rrsD;Note=SDY3455;gbkey=Gene;gene=rrsD;gene_biotype=rRNA;locus_tag=SDY_3455
NC_007606.1	RefSeq	rRNA	3209658	3211199	.	-	.	ID=rna68;Parent=gene3393;Dbxref=GeneID:3798666;gbkey=rRNA;gene=rrsD;product=16S ribosomal RNA
NC_007606.1	RefSeq	exon	3209658	3211199	.	-	.	ID=id539;Parent=rna68;Dbxref=GeneID:3798666;gbkey=rRNA;gene=rrsD;product=16S ribosomal RNA
NC_007606.1	RefSeq	gene	3211672	3212226	.	+	.	ID=gene3394;Dbxref=GeneID:3798667;Name=yrdA;Note=SDY3456;gbkey=Gene;gene=yrdA;gene_biotype=protein_coding;locus_tag=SDY_3456
NC_007606.1	RefSeq	CDS	3211672	3212226	.	+	0	ID=cds3004;Parent=gene3394;Dbxref=Genbank:YP_404926.2,GeneID:3798667;Name=YP_404926.2;Note=Code: R%3B COG: COG0663;gbkey=CDS;gene=yrdA;product=transferase;protein_id=YP_404926.2;transl_table=11
NC_007606.1	RefSeq	gene	3212202	3212459	.	-	.	ID=gene3395;Dbxref=GeneID:3798668;Name=yrdB;Note=SDY3457;gbkey=Gene;gene=yrdB;gene_biotype=protein_coding;locus_tag=SDY_3457
NC_007606.1	RefSeq	CDS	3212202	3212459	.	-	0	ID=cds3005;Parent=gene3395;Dbxref=Genbank:YP_404927.1,GeneID:3798668;Name=YP_404927.1;gbkey=CDS;gene=yrdB;product=hypothetical protein;protein_id=YP_404927.1;transl_table=11
NC_007606.1	RefSeq	gene	3212456	3213274	.	-	.	ID=gene3396;Dbxref=GeneID:3798669;Name=aroE;Note=SDY3458;gbkey=Gene;gene=aroE;gene_biotype=protein_coding;locus_tag=SDY_3458
NC_007606.1	RefSeq	CDS	3212456	3213274	.	-	0	ID=cds3006;Parent=gene3396;Dbxref=Genbank:YP_404928.1,GeneID:3798669;Name=YP_404928.1;Note=AroE%3B catalyzes the conversion of shikimate to 3-dehydroshikimate;gbkey=CDS;gene=aroE;product=shikimate 5-dehydrogenase;protein_id=YP_404928.1;transl_table=11
NC_007606.1	RefSeq	gene	3213279	3213851	.	-	.	ID=gene3397;Dbxref=GeneID:3798709;Name=yrdC;Note=SDY3459;gbkey=Gene;gene=yrdC;gene_biotype=protein_coding;locus_tag=SDY_3459
NC_007606.1	RefSeq	CDS	3213279	3213851	.	-	0	ID=cds3007;Parent=gene3397;Dbxref=Genbank:YP_404929.1,GeneID:3798709;Name=YP_404929.1;Note=RimN%3B YrdC%3B required for maturation of 16s RNA%3B binds preferentially double stranded RNA;gbkey=CDS;gene=yrdC;product=ribosome maturation factor;protein_id=YP_404929.1;transl_table=11
NC_007606.1	RefSeq	gene	3213856	3214398	.	-	.	ID=gene3398;Dbxref=GeneID:3798710;Name=yrdD;Note=SDY3460;gbkey=Gene;gene=yrdD;gene_biotype=protein_coding;locus_tag=SDY_3460
NC_007606.1	RefSeq	CDS	3213856	3214398	.	-	0	ID=cds3008;Parent=gene3398;Dbxref=Genbank:YP_404930.1,GeneID:3798710;Name=YP_404930.1;Note=Code: L%3B COG: COG0551;gbkey=CDS;gene=yrdD;product=DNA topoisomerase;protein_id=YP_404930.1;transl_table=11
NC_007606.1	RefSeq	gene	3214427	3214900	.	-	.	ID=gene3399;Dbxref=GeneID:3798711;Name=smg;Note=SDY3461;gbkey=Gene;gene=smg;gene_biotype=protein_coding;locus_tag=SDY_3461
NC_007606.1	RefSeq	CDS	3214427	3214900	.	-	0	ID=cds3009;Parent=gene3399;Dbxref=Genbank:YP_404931.1,GeneID:3798711;Name=YP_404931.1;Note=Code: S%3B COG: COG2922;gbkey=CDS;gene=smg;product=hypothetical protein;protein_id=YP_404931.1;transl_table=11
NC_007606.1	RefSeq	gene	3214872	3215996	.	-	.	ID=gene3400;Dbxref=GeneID:3798712;Name=smf;Note=SDY3462;gbkey=Gene;gene=smf;gene_biotype=protein_coding;locus_tag=SDY_3462
NC_007606.1	RefSeq	CDS	3214872	3215996	.	-	0	ID=cds3010;Parent=gene3400;Dbxref=Genbank:YP_404932.1,GeneID:3798712;Name=YP_404932.1;Note=Code: LU%3B COG: COG0758;gbkey=CDS;gene=smf;product=DNA protecting protein DprA;protein_id=YP_404932.1;transl_table=11
NC_007606.1	RefSeq	gene	3216126	3216635	.	+	.	ID=gene3401;Dbxref=GeneID:3798713;Name=def;Note=SDY3463;gbkey=Gene;gene=def;gene_biotype=protein_coding;locus_tag=SDY_3463
NC_007606.1	RefSeq	CDS	3216126	3216635	.	+	0	ID=cds3011;Parent=gene3401;Dbxref=Genbank:YP_404933.1,GeneID:3798713;Name=YP_404933.1;Note=cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins%3B binds iron(2+);gbkey=CDS;gene=def;product=peptide deformylase;protein_id=YP_404933.1;transl_table=11
NC_007606.1	RefSeq	gene	3216650	3217597	.	+	.	ID=gene3402;Dbxref=GeneID:3798714;Name=fmt;Note=SDY3464;gbkey=Gene;gene=fmt;gene_biotype=protein_coding;locus_tag=SDY_3464
NC_007606.1	RefSeq	CDS	3216650	3217597	.	+	0	ID=cds3012;Parent=gene3402;Dbxref=Genbank:YP_404934.1,GeneID:3798714;Name=YP_404934.1;Note=modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation%3B inactivation of this gene in Escherichia coli severely impairs growth;gbkey=CDS;gene=fmt;product=methionyl-tRNA formyltransferase;protein_id=YP_404934.1;transl_table=11
NC_007606.1	RefSeq	gene	3217643	3218932	.	+	.	ID=gene3403;Dbxref=GeneID:3798715;Name=sun;Note=SDY3465;gbkey=Gene;gene=sun;gene_biotype=protein_coding;locus_tag=SDY_3465
NC_007606.1	RefSeq	CDS	3217643	3218932	.	+	0	ID=cds3013;Parent=gene3403;Dbxref=Genbank:YP_404935.1,GeneID:3798715;Name=YP_404935.1;Note=catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA%3B SAM-dependent methyltransferase;gbkey=CDS;gene=sun;product=16S rRNA methyltransferase GidB;protein_id=YP_404935.1;transl_table=11
NC_007606.1	RefSeq	gene	3218954	3220330	.	+	.	ID=gene3404;Dbxref=GeneID:3798716;Name=trkA;Note=SDY3466;gbkey=Gene;gene=trkA;gene_biotype=protein_coding;gene_synonym=sapG;locus_tag=SDY_3466
NC_007606.1	RefSeq	CDS	3218954	3220330	.	+	0	ID=cds3014;Parent=gene3404;Dbxref=Genbank:YP_404936.1,GeneID:3798716;Name=YP_404936.1;Note=involved in potassium uptake%3B found to be peripherally associated with the inner membrane in Escherichia coli%3B contains an NAD-binding domain;gbkey=CDS;gene=trkA;product=potassium transporter peripheral membrane protein;protein_id=YP_404936.1;transl_table=11
NC_007606.1	RefSeq	gene	3220460	3220871	.	+	.	ID=gene3405;Dbxref=GeneID:3798717;Name=mscL;Note=SDY3467%3B frameshift%3B original product: mechanosensitive channel;gbkey=Gene;gene=mscL;gene_biotype=pseudogene;locus_tag=SDY_3467;pseudo=true
NC_007606.1	RefSeq	gene	3221143	3221568	.	-	.	ID=gene3406;Dbxref=GeneID:3798718;Name=zntR;Note=SDY3468;gbkey=Gene;gene=zntR;gene_biotype=protein_coding;locus_tag=SDY_3468
NC_007606.1	RefSeq	CDS	3221143	3221568	.	-	0	ID=cds3015;Parent=gene3406;Dbxref=Genbank:YP_404937.1,GeneID:3798718;Name=YP_404937.1;Note=mediates expression of the zinc export protein ZntA in response to high levels of zinc%3B member of MerR family of transcriptional regulators;gbkey=CDS;gene=zntR;product=zinc-responsive transcriptional regulator;protein_id=YP_404937.1;transl_table=11
NC_007606.1	RefSeq	gene	3221579	3221947	.	-	.	ID=gene3407;Dbxref=GeneID:3798719;Name=yhdN;Note=SDY3469;gbkey=Gene;gene=yhdN;gene_biotype=protein_coding;locus_tag=SDY_3469
NC_007606.1	RefSeq	CDS	3221579	3221947	.	-	0	ID=cds3016;Parent=gene3407;Dbxref=Genbank:YP_404938.1,GeneID:3798719;Name=YP_404938.1;gbkey=CDS;gene=yhdN;product=hypothetical protein;protein_id=YP_404938.1;transl_table=11
NC_007606.1	RefSeq	gene	3222054	3222437	.	-	.	ID=gene3408;Dbxref=GeneID:3798720;Name=rplQ;Note=SDY3470;gbkey=Gene;gene=rplQ;gene_biotype=protein_coding;locus_tag=SDY_3470
NC_007606.1	RefSeq	CDS	3222054	3222437	.	-	0	ID=cds3017;Parent=gene3408;Dbxref=Genbank:YP_404939.1,GeneID:3798720;Name=YP_404939.1;Note=is a component of the macrolide binding site in the peptidyl transferase center;gbkey=CDS;gene=rplQ;product=50S ribosomal protein L17;protein_id=YP_404939.1;transl_table=11
NC_007606.1	RefSeq	gene	3222478	3223467	.	-	.	ID=gene3409;Dbxref=GeneID:3798721;Name=rpoA;Note=SDY3471;gbkey=Gene;gene=rpoA;gene_biotype=protein_coding;locus_tag=SDY_3471
NC_007606.1	RefSeq	CDS	3222478	3223467	.	-	0	ID=cds3018;Parent=gene3409;Dbxref=Genbank:YP_404940.1,GeneID:3798721;Name=YP_404940.1;Note=catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme;gbkey=CDS;gene=rpoA;product=DNA-directed RNA polymerase subunit alpha;protein_id=YP_404940.1;transl_table=11
NC_007606.1	RefSeq	gene	3223493	3224113	.	-	.	ID=gene3410;Dbxref=GeneID:3798722;Name=rpsD;Note=SDY3472;gbkey=Gene;gene=rpsD;gene_biotype=protein_coding;locus_tag=SDY_3472
NC_007606.1	RefSeq	CDS	3223493	3224113	.	-	0	ID=cds3019;Parent=gene3410;Dbxref=Genbank:YP_404941.1,GeneID:3798722;Name=YP_404941.1;Note=primary rRNA binding protein%3B nucleates 30S assembly%3B involved in translational accuracy with proteins S5 and S12%3B interacts with protein S5%3B involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA%3B interacts with transcription complex and functions similar to protein NusA in antitermination;gbkey=CDS;gene=rpsD;product=30S ribosomal protein S4;protein_id=YP_404941.1;transl_table=11
NC_007606.1	RefSeq	gene	3224147	3224536	.	-	.	ID=gene3411;Dbxref=GeneID:3798723;Name=rpsK;Note=SDY3473;gbkey=Gene;gene=rpsK;gene_biotype=protein_coding;locus_tag=SDY_3473
NC_007606.1	RefSeq	CDS	3224147	3224536	.	-	0	ID=cds3020;Parent=gene3411;Dbxref=Genbank:YP_404942.1,GeneID:3798723;Name=YP_404942.1;Note=''located on the platform of the 30S subunit%2C it bridges several disparate RNA helices of the 16S rRNA%3B forms part of the Shine-Dalgarno cleft in the 70S ribosome%3B interacts with S7 and S18 and IF-3'';gbkey=CDS;gene=rpsK;product=30S ribosomal protein S11;protein_id=YP_404942.1;transl_table=11
NC_007606.1	RefSeq	gene	3224553	3224909	.	-	.	ID=gene3412;Dbxref=GeneID:3798724;Name=rpsM;Note=SDY3474;gbkey=Gene;gene=rpsM;gene_biotype=protein_coding;locus_tag=SDY_3474
NC_007606.1	RefSeq	CDS	3224553	3224909	.	-	0	ID=cds3021;Parent=gene3412;Dbxref=Genbank:YP_404943.1,GeneID:3798724;Name=YP_404943.1;Note=''located at the top of the head of the 30S subunit%2C it contacts several helices of the 16S rRNA%3B makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5%3B contacts P-site tRNA'';gbkey=CDS;gene=rpsM;product=30S ribosomal protein S13;protein_id=YP_404943.1;transl_table=11
NC_007606.1	RefSeq	gene	3225056	3225172	.	-	.	ID=gene3413;Dbxref=GeneID:3798725;Name=rpmJ;Note=SDY3475;gbkey=Gene;gene=rpmJ;gene_biotype=protein_coding;locus_tag=SDY_3475
NC_007606.1	RefSeq	CDS	3225056	3225172	.	-	0	ID=cds3022;Parent=gene3413;Dbxref=Genbank:YP_404944.1,GeneID:3798725;Name=YP_404944.1;Note=smallest protein in the large subunit%3B similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc%3B the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion%3B the proteins in this group have the motif;gbkey=CDS;gene=rpmJ;product=50S ribosomal protein L36;protein_id=YP_404944.1;transl_table=11
NC_007606.1	RefSeq	gene	3225204	3226535	.	-	.	ID=gene3414;Dbxref=GeneID:3798726;Name=secY;Note=SDY3476;gbkey=Gene;gene=secY;gene_biotype=protein_coding;locus_tag=SDY_3476
NC_007606.1	RefSeq	CDS	3225204	3226535	.	-	0	ID=cds3023;Parent=gene3414;Dbxref=Genbank:YP_404945.1,GeneID:3798726;Name=YP_404945.1;Note=forms heterotrimeric complex in the membrane%3B in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG%3B the SecG subunit is not essential%3B in bacteria translocation is driven via the SecA ATPase;gbkey=CDS;gene=secY;product=preprotein translocase subunit SecY;protein_id=YP_404945.1;transl_table=11
NC_007606.1	RefSeq	gene	3226543	3226977	.	-	.	ID=gene3415;Dbxref=GeneID:3798727;Name=rplO;Note=SDY3477;gbkey=Gene;gene=rplO;gene_biotype=protein_coding;locus_tag=SDY_3477
NC_007606.1	RefSeq	CDS	3226543	3226977	.	-	0	ID=cds3024;Parent=gene3415;Dbxref=Genbank:YP_404946.1,GeneID:3798727;Name=YP_404946.1;Note=late assembly protein;gbkey=CDS;gene=rplO;product=50S ribosomal protein L15;protein_id=YP_404946.1;transl_table=11
NC_007606.1	RefSeq	gene	3226981	3227160	.	-	.	ID=gene3416;Dbxref=GeneID:3796670;Name=rpmD;Note=SDY3478;gbkey=Gene;gene=rpmD;gene_biotype=protein_coding;locus_tag=SDY_3478
NC_007606.1	RefSeq	CDS	3226981	3227160	.	-	0	ID=cds3025;Parent=gene3416;Dbxref=Genbank:YP_404947.1,GeneID:3796670;Name=YP_404947.1;Note=L30 binds domain II of the 23S rRNA and the 5S rRNA%3B similar to eukaryotic protein L7;gbkey=CDS;gene=rpmD;product=50S ribosomal protein L30;protein_id=YP_404947.1;transl_table=11
NC_007606.1	RefSeq	gene	3227164	3227667	.	-	.	ID=gene3417;Dbxref=GeneID:3796671;Name=rpsE;Note=SDY3479;gbkey=Gene;gene=rpsE;gene_biotype=protein_coding;locus_tag=SDY_3479
NC_007606.1	RefSeq	CDS	3227164	3227667	.	-	0	ID=cds3026;Parent=gene3417;Dbxref=Genbank:YP_404948.1,GeneID:3796671;Name=YP_404948.1;Note=located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body%3B contacts S4 and S8%3B with S4 and S12 plays a role in translational accuracy%3B mutations in this gene result in spectinomycin resistance;gbkey=CDS;gene=rpsE;product=30S ribosomal protein S5;protein_id=YP_404948.1;transl_table=11
NC_007606.1	RefSeq	gene	3227682	3228035	.	-	.	ID=gene3418;Dbxref=GeneID:3796672;Name=rplR;Note=SDY3480;gbkey=Gene;gene=rplR;gene_biotype=protein_coding;locus_tag=SDY_3480
NC_007606.1	RefSeq	CDS	3227682	3228035	.	-	0	ID=cds3027;Parent=gene3418;Dbxref=Genbank:YP_404949.1,GeneID:3796672;Name=YP_404949.1;Note=binds 5S rRNA along with protein L5 and L25;gbkey=CDS;gene=rplR;product=50S ribosomal protein L18;protein_id=YP_404949.1;transl_table=11
NC_007606.1	RefSeq	gene	3228045	3228578	.	-	.	ID=gene3419;Dbxref=GeneID:3796673;Name=rplF;Note=SDY3481;gbkey=Gene;gene=rplF;gene_biotype=protein_coding;locus_tag=SDY_3481
NC_007606.1	RefSeq	CDS	3228045	3228578	.	-	0	ID=cds3028;Parent=gene3419;Dbxref=Genbank:YP_404950.1,GeneID:3796673;Name=YP_404950.1;Note=ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein%3B RNA-binding appears to be in the C-terminal domain%3B mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain%3B it has been localized to a region between the base of the L7/L12 stalk and the central protuberance;gbkey=CDS;gene=rplF;product=50S ribosomal protein L6;protein_id=YP_404950.1;transl_table=11
NC_007606.1	RefSeq	gene	3228591	3228983	.	-	.	ID=gene3420;Dbxref=GeneID:3796674;Name=rpsH;Note=SDY3482;gbkey=Gene;gene=rpsH;gene_biotype=protein_coding;locus_tag=SDY_3482
NC_007606.1	RefSeq	CDS	3228591	3228983	.	-	0	ID=cds3029;Parent=gene3420;Dbxref=Genbank:YP_404951.1,GeneID:3796674;Name=YP_404951.1;Note=binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit;gbkey=CDS;gene=rpsH;product=30S ribosomal protein S8;protein_id=YP_404951.1;transl_table=11
NC_007606.1	RefSeq	gene	3229017	3229322	.	-	.	ID=gene3421;Dbxref=GeneID:3796675;Name=rpsN;Note=SDY3483;gbkey=Gene;gene=rpsN;gene_biotype=protein_coding;locus_tag=SDY_3483
NC_007606.1	RefSeq	CDS	3229017	3229322	.	-	0	ID=cds3030;Parent=gene3421;Dbxref=Genbank:YP_404952.1,GeneID:3796675;Name=YP_404952.1;Note=''located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit%3B similar to what is observed with proteins L31 and L33%2C some proteins in this family contain CXXC motifs that are involved in zinc binding%3B if two copies are present in a genome%2C then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc%3B the proteins in this group do not appear to have the zinc-binding motif'';gbkey=CDS;gene=rpsN;product=30S ribosomal protein S14;protein_id=YP_404952.1;transl_table=11
NC_007606.1	RefSeq	gene	3229337	3229876	.	-	.	ID=gene3422;Dbxref=GeneID:3796676;Name=rplE;Note=SDY3484;gbkey=Gene;gene=rplE;gene_biotype=protein_coding;locus_tag=SDY_3484
NC_007606.1	RefSeq	CDS	3229337	3229876	.	-	0	ID=cds3031;Parent=gene3422;Dbxref=Genbank:YP_404953.1,GeneID:3796676;Name=YP_404953.1;Note=part of 50S and 5S/L5/L18/L25 subcomplex%3B contacts 5S rRNA and P site tRNA%3B forms a bridge to the 30S subunit in the ribosome by binding to S13;gbkey=CDS;gene=rplE;product=50S ribosomal protein L5;protein_id=YP_404953.1;transl_table=11
NC_007606.1	RefSeq	gene	3229891	3230205	.	-	.	ID=gene3423;Dbxref=GeneID:3796677;Name=rplX;Note=SDY3485;gbkey=Gene;gene=rplX;gene_biotype=protein_coding;locus_tag=SDY_3485
NC_007606.1	RefSeq	CDS	3229891	3230205	.	-	0	ID=cds3032;Parent=gene3423;Dbxref=Genbank:YP_404954.1,GeneID:3796677;Name=YP_404954.1;Note=assembly initiator protein%3B binds to 5' end of 23S rRNA and nucleates assembly of the 50S%3B surrounds polypeptide exit tunnel;gbkey=CDS;gene=rplX;product=50S ribosomal protein L24;protein_id=YP_404954.1;transl_table=11
NC_007606.1	RefSeq	gene	3230216	3230587	.	-	.	ID=gene3424;Dbxref=GeneID:3796678;Name=rplN;Note=SDY3486;gbkey=Gene;gene=rplN;gene_biotype=protein_coding;locus_tag=SDY_3486
NC_007606.1	RefSeq	CDS	3230216	3230587	.	-	0	ID=cds3033;Parent=gene3424;Dbxref=Genbank:YP_404955.1,GeneID:3796678;Name=YP_404955.1;Note=binds to the 23S rRNA between the centers for peptidyl transferase and GTPase;gbkey=CDS;gene=rplN;product=50S ribosomal protein L14;protein_id=YP_404955.1;transl_table=11
NC_007606.1	RefSeq	gene	3230752	3231006	.	-	.	ID=gene3425;Dbxref=GeneID:3796679;Name=rpsQ;Note=SDY3487;gbkey=Gene;gene=rpsQ;gene_biotype=protein_coding;locus_tag=SDY_3487
NC_007606.1	RefSeq	CDS	3230752	3231006	.	-	0	ID=cds3034;Parent=gene3425;Dbxref=Genbank:YP_404956.1,GeneID:3796679;Name=YP_404956.1;Note=primary binding protein%3B helps mediate assembly%3B involved in translation fidelity;gbkey=CDS;gene=rpsQ;product=30S ribosomal protein S17;protein_id=YP_404956.1;transl_table=11
NC_007606.1	RefSeq	gene	3231006	3231197	.	-	.	ID=gene3426;Dbxref=GeneID:3796680;Name=rpmC;Note=SDY3488;gbkey=Gene;gene=rpmC;gene_biotype=protein_coding;locus_tag=SDY_3488
NC_007606.1	RefSeq	CDS	3231006	3231197	.	-	0	ID=cds3035;Parent=gene3426;Dbxref=Genbank:YP_404957.1,GeneID:3796680;Name=YP_404957.1;Note=one of the stabilizing components for the large ribosomal subunit;gbkey=CDS;gene=rpmC;product=50S ribosomal protein L29;protein_id=YP_404957.1;transl_table=11
NC_007606.1	RefSeq	gene	3231197	3231607	.	-	.	ID=gene3427;Dbxref=GeneID:3796681;Name=rplP;Note=SDY3489;gbkey=Gene;gene=rplP;gene_biotype=protein_coding;locus_tag=SDY_3489
NC_007606.1	RefSeq	CDS	3231197	3231607	.	-	0	ID=cds3036;Parent=gene3427;Dbxref=Genbank:YP_404958.1,GeneID:3796681;Name=YP_404958.1;Note=located in the peptidyl transferase center and may be involved in peptidyl transferase activity%3B similar to archaeal L10e;gbkey=CDS;gene=rplP;product=50S ribosomal protein L16;protein_id=YP_404958.1;transl_table=11
NC_007606.1	RefSeq	gene	3231620	3232321	.	-	.	ID=gene3428;Dbxref=GeneID:3796682;Name=rpsC;Note=SDY3490;gbkey=Gene;gene=rpsC;gene_biotype=protein_coding;locus_tag=SDY_3490
NC_007606.1	RefSeq	CDS	3231620	3232321	.	-	0	ID=cds3037;Parent=gene3428;Dbxref=Genbank:YP_404959.1,GeneID:3796682;Name=YP_404959.1;Note=forms a complex with S10 and S14%3B binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation;gbkey=CDS;gene=rpsC;product=30S ribosomal protein S3;protein_id=YP_404959.1;transl_table=11
NC_007606.1	RefSeq	gene	3232339	3232671	.	-	.	ID=gene3429;Dbxref=GeneID:3796683;Name=rplV;Note=SDY3491;gbkey=Gene;gene=rplV;gene_biotype=protein_coding;locus_tag=SDY_3491
NC_007606.1	RefSeq	CDS	3232339	3232671	.	-	0	ID=cds3038;Parent=gene3429;Dbxref=Genbank:YP_404960.1,GeneID:3796683;Name=YP_404960.1;Note=binds specifically to 23S rRNA during the early stages of 50S assembly%3B makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome%3B mutations in this gene result in erythromycin resistance%3B located near peptidyl-transferase center;gbkey=CDS;gene=rplV;product=50S ribosomal protein L22;protein_id=YP_404960.1;transl_table=11
NC_007606.1	RefSeq	gene	3232686	3232964	.	-	.	ID=gene3430;Dbxref=GeneID:3796684;Name=rpsS;Note=SDY3492;gbkey=Gene;gene=rpsS;gene_biotype=protein_coding;locus_tag=SDY_3492
NC_007606.1	RefSeq	CDS	3232686	3232964	.	-	0	ID=cds3039;Parent=gene3430;Dbxref=Genbank:YP_404961.1,GeneID:3796684;Name=YP_404961.1;Note=protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA;gbkey=CDS;gene=rpsS;product=30S ribosomal protein S19;protein_id=YP_404961.1;transl_table=11
NC_007606.1	RefSeq	gene	3232981	3233802	.	-	.	ID=gene3431;Dbxref=GeneID:3796685;Name=rplB;Note=SDY3493;gbkey=Gene;gene=rplB;gene_biotype=protein_coding;locus_tag=SDY_3493
NC_007606.1	RefSeq	CDS	3232981	3233802	.	-	0	ID=cds3040;Parent=gene3431;Dbxref=Genbank:YP_404962.1,GeneID:3796685;Name=YP_404962.1;Note=''one of the primary rRNA-binding proteins%3B required for association of the 30S and 50S subunits to form the 70S ribosome%2C for tRNA binding and peptide bond formation'';gbkey=CDS;gene=rplB;product=50S ribosomal protein L2;protein_id=YP_404962.1;transl_table=11
NC_007606.1	RefSeq	gene	3233820	3234122	.	-	.	ID=gene3432;Dbxref=GeneID:3796686;Name=rplW;Note=SDY3494;gbkey=Gene;gene=rplW;gene_biotype=protein_coding;locus_tag=SDY_3494
NC_007606.1	RefSeq	CDS	3233820	3234122	.	-	0	ID=cds3041;Parent=gene3432;Dbxref=Genbank:YP_404963.1,GeneID:3796686;Name=YP_404963.1;Note=binds third domain of 23S rRNA and protein L29%3B part of exit tunnel;gbkey=CDS;gene=rplW;product=50S ribosomal protein L23;protein_id=YP_404963.1;transl_table=11
NC_007606.1	RefSeq	gene	3234119	3234724	.	-	.	ID=gene3433;Dbxref=GeneID:3796687;Name=rplD;Note=SDY3495;gbkey=Gene;gene=rplD;gene_biotype=protein_coding;locus_tag=SDY_3495
NC_007606.1	RefSeq	CDS	3234119	3234724	.	-	0	ID=cds3042;Parent=gene3433;Dbxref=Genbank:YP_404964.1,GeneID:3796687;Name=YP_404964.1;Note=L4 is important during the early stages of 50S assembly%3B it initially binds near the 5' end of the 23S rRNA;gbkey=CDS;gene=rplD;product=50S ribosomal protein L4;protein_id=YP_404964.1;transl_table=11
NC_007606.1	RefSeq	gene	3234735	3235364	.	-	.	ID=gene3434;Dbxref=GeneID:3796688;Name=rplC;Note=SDY3496;gbkey=Gene;gene=rplC;gene_biotype=protein_coding;locus_tag=SDY_3496
NC_007606.1	RefSeq	CDS	3234735	3235364	.	-	0	ID=cds3043;Parent=gene3434;Dbxref=Genbank:YP_404965.1,GeneID:3796688;Name=YP_404965.1;Note=''binds directly near the 3' end of the 23S rRNA%2C where it nucleates assembly of the 50S subunit%3B essential for peptidyltransferase activity%3B mutations in this gene confer resistance to tiamulin'';gbkey=CDS;gene=rplC;product=50S ribosomal protein L3;protein_id=YP_404965.1;transl_table=11
NC_007606.1	RefSeq	gene	3235397	3235708	.	-	.	ID=gene3435;Dbxref=GeneID:3796689;Name=rpsJ;Note=SDY3497;gbkey=Gene;gene=rpsJ;gene_biotype=protein_coding;gene_synonym=nusE;locus_tag=SDY_3497
NC_007606.1	RefSeq	CDS	3235397	3235708	.	-	0	ID=cds3044;Parent=gene3435;Dbxref=Genbank:YP_404966.1,GeneID:3796689;Name=YP_404966.1;Note=''NusE%3B involved in assembly of the 30S subunit%3B in the ribosome%2C this protein is involved in the binding of tRNA%3B in Escherichia coli this protein was also found to be involved in transcription antitermination%3B NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination%3B binding of NusB/S10 to boxA nucleates assembly of the antitermination complex'';gbkey=CDS;gene=rpsJ;product=30S ribosomal protein S10;protein_id=YP_404966.1;transl_table=11
NC_007606.1	RefSeq	gene	3236551	3237027	.	-	.	ID=gene3436;Dbxref=GeneID:3797787;Name=bfr;Note=SDY3498;gbkey=Gene;gene=bfr;gene_biotype=protein_coding;locus_tag=SDY_3498
NC_007606.1	RefSeq	CDS	3236551	3237027	.	-	0	ID=cds3045;Parent=gene3436;Dbxref=Genbank:YP_404967.1,GeneID:3797787;Name=YP_404967.1;Note=iron storage protein;gbkey=CDS;gene=bfr;product=bacterioferritin;protein_id=YP_404967.1;transl_table=11
NC_007606.1	RefSeq	gene	3237100	3237294	.	-	.	ID=gene3437;Dbxref=GeneID:3797788;Name=SDY_3499;Note=SDY3499;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3499
NC_007606.1	RefSeq	CDS	3237100	3237294	.	-	0	ID=cds3046;Parent=gene3437;Dbxref=Genbank:YP_404968.1,GeneID:3797788;Name=YP_404968.1;Note=Code: P%3B COG: COG2906;gbkey=CDS;product=bacterioferritin-associated ferredoxin;protein_id=YP_404968.1;transl_table=11
NC_007606.1	RefSeq	gene	3237477	3238661	.	-	.	ID=gene3438;Dbxref=GeneID:3797789;Name=tufA;Note=SDY3500;gbkey=Gene;gene=tufA;gene_biotype=protein_coding;gene_synonym=tuf;locus_tag=SDY_3500
NC_007606.1	RefSeq	CDS	3237477	3238661	.	-	0	ID=cds3047;Parent=gene3438;Dbxref=Genbank:YP_404969.1,GeneID:3797789;Name=YP_404969.1;Note=''EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu'';gbkey=CDS;gene=tufA;product=elongation factor Tu;protein_id=YP_404969.1;transl_table=11
NC_007606.1	RefSeq	gene	3238732	3240846	.	-	.	ID=gene3439;Dbxref=GeneID:3797790;Name=fusA;Note=SDY3501;gbkey=Gene;gene=fusA;gene_biotype=protein_coding;locus_tag=SDY_3501
NC_007606.1	RefSeq	CDS	3238732	3240846	.	-	0	ID=cds3048;Parent=gene3439;Dbxref=Genbank:YP_404970.1,GeneID:3797790;Name=YP_404970.1;Note=EF-G%3B promotes GTP-dependent translocation of the ribosome during translation%3B many organisms have multiple copies of this gene;gbkey=CDS;gene=fusA;product=elongation factor G;protein_id=YP_404970.1;transl_table=11
NC_007606.1	RefSeq	gene	3240943	3241413	.	-	.	ID=gene3440;Dbxref=GeneID:3797791;Name=rpsG;Note=SDY3502;gbkey=Gene;gene=rpsG;gene_biotype=protein_coding;locus_tag=SDY_3502
NC_007606.1	RefSeq	CDS	3240943	3241413	.	-	0	ID=cds3049;Parent=gene3440;Dbxref=Genbank:YP_404971.1,GeneID:3797791;Name=YP_404971.1;Note=binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit;gbkey=CDS;gene=rpsG;product=30S ribosomal protein S7;protein_id=YP_404971.1;transl_table=11
NC_007606.1	RefSeq	gene	3241510	3241884	.	-	.	ID=gene3441;Dbxref=GeneID:3797792;Name=rpsL;Note=SDY3503;gbkey=Gene;gene=rpsL;gene_biotype=protein_coding;locus_tag=SDY_3503
NC_007606.1	RefSeq	CDS	3241510	3241884	.	-	0	ID=cds3050;Parent=gene3441;Dbxref=Genbank:YP_404972.1,GeneID:3797792;Name=YP_404972.1;Note=''interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone%3B located at the interface of the 30S and 50S subunits%2C it traverses the body of the 30S subunit contacting proteins on the other side%3B mutations in the S12 gene confer streptomycin resistance'';gbkey=CDS;gene=rpsL;product=30S ribosomal protein S12;protein_id=YP_404972.1;transl_table=11
NC_007606.1	RefSeq	gene	3242010	3242297	.	-	.	ID=gene3442;Dbxref=GeneID:3797793;Name=yheL;Note=SDY3504;gbkey=Gene;gene=yheL;gene_biotype=protein_coding;locus_tag=SDY_3504
NC_007606.1	RefSeq	CDS	3242010	3242297	.	-	0	ID=cds3051;Parent=gene3442;Dbxref=Genbank:YP_404973.1,GeneID:3797793;Name=YP_404973.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;gene=yheL;product=sulfur transfer complex subunit TusB;protein_id=YP_404973.1;transl_table=11
NC_007606.1	RefSeq	gene	3242305	3242664	.	-	.	ID=gene3443;Dbxref=GeneID:3797794;Name=yheM;Note=SDY3505;gbkey=Gene;gene=yheM;gene_biotype=protein_coding;locus_tag=SDY_3505
NC_007606.1	RefSeq	CDS	3242305	3242664	.	-	0	ID=cds3052;Parent=gene3443;Dbxref=Genbank:YP_404974.1,GeneID:3797794;Name=YP_404974.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;gene=yheM;product=sulfur relay protein TusC;protein_id=YP_404974.1;transl_table=11
NC_007606.1	RefSeq	gene	3242664	3243050	.	-	.	ID=gene3444;Dbxref=GeneID:3797795;Name=yheN;Note=SDY3506;gbkey=Gene;gene=yheN;gene_biotype=protein_coding;locus_tag=SDY_3506
NC_007606.1	RefSeq	CDS	3242664	3243050	.	-	0	ID=cds3053;Parent=gene3444;Dbxref=Genbank:YP_404975.1,GeneID:3797795;Name=YP_404975.1;Note=in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs;gbkey=CDS;gene=yheN;product=sulfur transfer complex subunit TusD;protein_id=YP_404975.1;transl_table=11
NC_007606.1	RefSeq	gene	3243050	3243784	.	-	.	ID=gene3445;Dbxref=GeneID:3797796;Name=yheO;Note=SDY3507;gbkey=Gene;gene=yheO;gene_biotype=protein_coding;locus_tag=SDY_3507
NC_007606.1	RefSeq	CDS	3243050	3243784	.	-	0	ID=cds3054;Parent=gene3445;Dbxref=Genbank:YP_404976.1,GeneID:3797796;Name=YP_404976.1;Note=Code: S%3B COG: COG2964;gbkey=CDS;gene=yheO;product=hypothetical protein;protein_id=YP_404976.1;transl_table=11
NC_007606.1	RefSeq	gene	3243939	3244733	.	-	.	ID=gene3446;Dbxref=GeneID:3797797;Name=fkpA;Note=SDY3508;gbkey=Gene;gene=fkpA;gene_biotype=protein_coding;locus_tag=SDY_3508
NC_007606.1	RefSeq	CDS	3243939	3244733	.	-	0	ID=cds3055;Parent=gene3446;Dbxref=Genbank:YP_404977.1,GeneID:3797797;Name=YP_404977.1;Note=rotamase;gbkey=CDS;gene=fkpA;product=FKBP-type peptidylprolyl isomerase;protein_id=YP_404977.1;transl_table=11
NC_007606.1	RefSeq	gene	3244954	3245172	.	+	.	ID=gene3447;Dbxref=GeneID:3797798;Name=slyX;Note=SDY3509;gbkey=Gene;gene=slyX;gene_biotype=protein_coding;locus_tag=SDY_3509
NC_007606.1	RefSeq	CDS	3244954	3245172	.	+	0	ID=cds3056;Parent=gene3447;Dbxref=Genbank:YP_404978.1,GeneID:3797798;Name=YP_404978.1;Note=Code: S%3B COG: COG2900;gbkey=CDS;gene=slyX;product=hypothetical protein;protein_id=YP_404978.1;transl_table=11
NC_007606.1	RefSeq	gene	3245221	3245799	.	-	.	ID=gene3448;Dbxref=GeneID:3797799;Name=slyD;Note=SDY3510;gbkey=Gene;gene=slyD;gene_biotype=protein_coding;locus_tag=SDY_3510
NC_007606.1	RefSeq	CDS	3245221	3245799	.	-	0	ID=cds3057;Parent=gene3448;Dbxref=Genbank:YP_404979.1,GeneID:3797799;Name=YP_404979.1;Note=rotamase;gbkey=CDS;gene=slyD;product=FKBP-type peptidylprolyl isomerase;protein_id=YP_404979.1;transl_table=11
NC_007606.1	RefSeq	gene	3245894	3246094	.	-	.	ID=gene3449;Dbxref=GeneID:3797800;Name=SDY_3511;Note=SDY3511;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3511
NC_007606.1	RefSeq	CDS	3245894	3246094	.	-	0	ID=cds3058;Parent=gene3449;Dbxref=Genbank:YP_404980.1,GeneID:3797800;Name=YP_404980.1;Note=Code: R%3B COG: COG3529;gbkey=CDS;product=hypothetical protein;protein_id=YP_404980.1;transl_table=11
NC_007606.1	RefSeq	gene	3246104	3247648	.	-	.	ID=gene3450;Dbxref=GeneID:3797801;Name=kefB;Note=SDY3512;gbkey=Gene;gene=kefB;gene_biotype=protein_coding;locus_tag=SDY_3512
NC_007606.1	RefSeq	CDS	3246104	3247648	.	-	0	ID=cds3059;Parent=gene3450;Dbxref=Genbank:YP_404981.1,GeneID:3797801;Name=YP_404981.1;Note=Code: P%3B COG: COG1226;gbkey=CDS;gene=kefB;product=NEM-activable K+/H+ antiporter;protein_id=YP_404981.1;transl_table=11
NC_007606.1	RefSeq	gene	3247648	3248202	.	-	.	ID=gene3451;Dbxref=GeneID:3797802;Name=yheR;Note=SDY3513;gbkey=Gene;gene=yheR;gene_biotype=protein_coding;locus_tag=SDY_3513
NC_007606.1	RefSeq	CDS	3247648	3248202	.	-	0	ID=cds3060;Parent=gene3451;Dbxref=Genbank:YP_404982.1,GeneID:3797802;Name=YP_404982.1;Note=required for KefB activity;gbkey=CDS;gene=yheR;product=glutathione-regulated potassium-efflux system ancillary protein KefG;protein_id=YP_404982.1;transl_table=11
NC_007606.1	RefSeq	gene	3248330	3250243	.	+	.	ID=gene3452;Dbxref=GeneID:3797803;Name=yheS;Note=SDY3514;gbkey=Gene;gene=yheS;gene_biotype=protein_coding;locus_tag=SDY_3514
NC_007606.1	RefSeq	CDS	3248330	3250243	.	+	0	ID=cds3061;Parent=gene3452;Dbxref=Genbank:YP_404983.1,GeneID:3797803;Name=YP_404983.1;Note=Code: R%3B COG: COG0488;gbkey=CDS;gene=yheS;product=ABC transporter ATP-binding protein;protein_id=YP_404983.1;transl_table=11
NC_007606.1	RefSeq	gene	3250243	3251265	.	+	.	ID=gene3453;Dbxref=GeneID:3797804;Name=yheT;Note=SDY3515;gbkey=Gene;gene=yheT;gene_biotype=protein_coding;locus_tag=SDY_3515
NC_007606.1	RefSeq	CDS	3250243	3251265	.	+	0	ID=cds3062;Parent=gene3453;Dbxref=Genbank:YP_404984.1,GeneID:3797804;Name=YP_404984.1;Note=Code: R%3B COG: COG0429;gbkey=CDS;gene=yheT;product=hydrolase;protein_id=YP_404984.1;transl_table=11
NC_007606.1	RefSeq	gene	3251259	3251477	.	+	.	ID=gene3454;Dbxref=GeneID:3797805;Name=yheU;Note=SDY3516;gbkey=Gene;gene=yheU;gene_biotype=protein_coding;locus_tag=SDY_3516
NC_007606.1	RefSeq	CDS	3251259	3251477	.	+	0	ID=cds3063;Parent=gene3454;Dbxref=Genbank:YP_404985.1,GeneID:3797805;Name=YP_404985.1;Note=Code: S%3B COG: COG3089;gbkey=CDS;gene=yheU;product=hypothetical protein;protein_id=YP_404985.1;transl_table=11
NC_007606.1	RefSeq	gene	3251531	3252401	.	+	.	ID=gene3455;Dbxref=GeneID:3798118;Name=prkB;Note=SDY3517%3B frameshift%3B original product: probable phosphoribulokinase;gbkey=Gene;gene=prkB;gene_biotype=pseudogene;locus_tag=SDY_3517;pseudo=true
NC_007606.1	RefSeq	gene	3252456	3252860	.	-	.	ID=gene3456;Dbxref=GeneID:3798119;Name=yhfA;Note=SDY3518;gbkey=Gene;gene=yhfA;gene_biotype=protein_coding;locus_tag=SDY_3518
NC_007606.1	RefSeq	CDS	3252456	3252860	.	-	0	ID=cds3064;Parent=gene3456;Dbxref=Genbank:YP_404986.1,GeneID:3798119;Name=YP_404986.1;Note=Code: O%3B COG: COG1765;gbkey=CDS;gene=yhfA;product=hypothetical protein;protein_id=YP_404986.1;transl_table=11
NC_007606.1	RefSeq	gene	3253162	3253794	.	+	.	ID=gene3457;Dbxref=GeneID:3798120;Name=crp;Note=SDY3519;gbkey=Gene;gene=crp;gene_biotype=protein_coding;locus_tag=SDY_3519
NC_007606.1	RefSeq	CDS	3253162	3253794	.	+	0	ID=cds3065;Parent=gene3457;Dbxref=Genbank:YP_404987.1,GeneID:3798120;Name=YP_404987.1;Note=complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons;gbkey=CDS;gene=crp;product=cAMP-regulatory protein;protein_id=YP_404987.1;transl_table=11
NC_007606.1	RefSeq	gene	3253845	3255935	.	+	.	ID=gene3458;Dbxref=GeneID:3798121;Name=yhfK;Note=SDY3520;gbkey=Gene;gene=yhfK;gene_biotype=protein_coding;locus_tag=SDY_3520
NC_007606.1	RefSeq	CDS	3253845	3255935	.	+	0	ID=cds3066;Parent=gene3458;Dbxref=Genbank:YP_404988.1,GeneID:3798121;Name=YP_404988.1;Note=Code: S%3B COG: COG1289;gbkey=CDS;gene=yhfK;product=hypothetical protein;protein_id=YP_404988.1;transl_table=11
NC_007606.1	RefSeq	gene	3256002	3257222	.	-	.	ID=gene3459;Dbxref=GeneID:3798122;Name=argD;Note=SDY3521;gbkey=Gene;gene=argD;gene_biotype=protein_coding;locus_tag=SDY_3521
NC_007606.1	RefSeq	CDS	3256002	3257222	.	-	0	ID=cds3067;Parent=gene3459;Dbxref=Genbank:YP_404989.1,GeneID:3798122;Name=YP_404989.1;Note=''DapATase%3B bifunctional enzyme that functions in arginine and lysine biosynthetic pathways%3B catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2%2C6-diaminoheptanedioate'';gbkey=CDS;gene=argD;product=bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase;protein_id=YP_404989.1;transl_table=11
NC_007606.1	RefSeq	gene	3257308	3257871	.	-	.	ID=gene3460;Dbxref=GeneID:3798123;Name=pabA;Note=SDY3522;gbkey=Gene;gene=pabA;gene_biotype=protein_coding;locus_tag=SDY_3522
NC_007606.1	RefSeq	CDS	3257308	3257871	.	-	0	ID=cds3068;Parent=gene3460;Dbxref=Genbank:YP_404990.1,GeneID:3798123;Name=YP_404990.1;Note=aminodeoxychorismate synthase subunit PabA%3B with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis%3B PabA provides the glutamine amidotransferase activity;gbkey=CDS;gene=pabA;product=para-aminobenzoate synthase component II;protein_id=YP_404990.1;transl_table=11
NC_007606.1	RefSeq	gene	3257903	3258505	.	-	.	ID=gene3461;Dbxref=GeneID:3798124;Name=fic;Note=SDY3523;gbkey=Gene;gene=fic;gene_biotype=protein_coding;locus_tag=SDY_3523
NC_007606.1	RefSeq	CDS	3257903	3258505	.	-	0	ID=cds3069;Parent=gene3461;Dbxref=Genbank:YP_404991.1,GeneID:3798124;Name=YP_404991.1;Note=Code: D%3B COG: COG2184;gbkey=CDS;gene=fic;product=cell filamentation protein Fic;protein_id=YP_404991.1;transl_table=11
NC_007606.1	RefSeq	gene	3258495	3258662	.	-	.	ID=gene3462;Dbxref=GeneID:3798125;Name=yhfG;Note=SDY3524;gbkey=Gene;gene=yhfG;gene_biotype=protein_coding;locus_tag=SDY_3524
NC_007606.1	RefSeq	CDS	3258495	3258662	.	-	0	ID=cds3070;Parent=gene3462;Dbxref=Genbank:YP_404992.1,GeneID:3798125;Name=YP_404992.1;gbkey=CDS;gene=yhfG;product=hypothetical protein;protein_id=YP_404992.1;transl_table=11
NC_007606.1	RefSeq	gene	3258767	3259339	.	-	.	ID=gene3463;Dbxref=GeneID:3798126;Name=ppiA;Note=SDY3525;gbkey=Gene;gene=ppiA;gene_biotype=protein_coding;locus_tag=SDY_3525
NC_007606.1	RefSeq	CDS	3258767	3259339	.	-	0	ID=cds3071;Parent=gene3463;Dbxref=Genbank:YP_404993.1,GeneID:3798126;Name=YP_404993.1;Note=Code: O%3B COG: COG0652;gbkey=CDS;gene=ppiA;product=peptidyl-prolyl cis-trans isomerase A;protein_id=YP_404993.1;transl_table=11
NC_007606.1	RefSeq	gene	3259610	3260791	.	+	.	ID=gene3464;Dbxref=GeneID:3798127;Name=yhfC;Note=SDY3526;gbkey=Gene;gene=yhfC;gene_biotype=protein_coding;locus_tag=SDY_3526
NC_007606.1	RefSeq	CDS	3259610	3260791	.	+	0	ID=cds3072;Parent=gene3464;Dbxref=Genbank:YP_404994.1,GeneID:3798127;Name=YP_404994.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=yhfC;product=hypothetical protein;protein_id=YP_404994.1;transl_table=11
NC_007606.1	RefSeq	gene	3261053	3263596	.	+	.	ID=gene3465;Dbxref=GeneID:3798128;Name=nirB;Note=SDY3527;gbkey=Gene;gene=nirB;gene_biotype=protein_coding;locus_tag=SDY_3527
NC_007606.1	RefSeq	CDS	3261053	3263596	.	+	0	ID=cds3073;Parent=gene3465;Dbxref=Genbank:YP_404995.1,GeneID:3798128;Name=YP_404995.1;Note=Code: C%3B COG: COG1251;gbkey=CDS;gene=nirB;product=nitrite reductase (NAD(P)H) subunit;protein_id=YP_404995.1;transl_table=11
NC_007606.1	RefSeq	gene	3263593	3263919	.	+	.	ID=gene3466;Dbxref=GeneID:3798129;Name=nirD;Note=SDY3528;gbkey=Gene;gene=nirD;gene_biotype=protein_coding;locus_tag=SDY_3528
NC_007606.1	RefSeq	CDS	3263593	3263919	.	+	0	ID=cds3074;Parent=gene3466;Dbxref=Genbank:YP_404996.1,GeneID:3798129;Name=YP_404996.1;Note=''involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+%3B bounds to NirB%2C the cytoplasmic subunit%2C whose expression is induced at high nitrate concentrations'';gbkey=CDS;gene=nirD;product=nitrite reductase small subunit;protein_id=YP_404996.1;transl_table=11
NC_007606.1	RefSeq	gene	3264045	3264851	.	+	.	ID=gene3467;Dbxref=GeneID:3798130;Name=nirC;Note=SDY3529;gbkey=Gene;gene=nirC;gene_biotype=protein_coding;locus_tag=SDY_3529
NC_007606.1	RefSeq	CDS	3264045	3264851	.	+	0	ID=cds3075;Parent=gene3467;Dbxref=Genbank:YP_404997.1,GeneID:3798130;Name=YP_404997.1;Note=member of the FNT family of formate and nitrite transporters;gbkey=CDS;gene=nirC;product=nitrite transporter NirC;protein_id=YP_404997.1;transl_table=11
NC_007606.1	RefSeq	gene	3264870	3266243	.	+	.	ID=gene3468;Dbxref=GeneID:3798131;Name=cysG;Note=SDY3530;gbkey=Gene;gene=cysG;gene_biotype=protein_coding;locus_tag=SDY_3530
NC_007606.1	RefSeq	CDS	3264870	3266243	.	+	0	ID=cds3076;Parent=gene3468;Dbxref=Genbank:YP_404998.1,GeneID:3798131;Name=YP_404998.1;Note=''multifunction enzyme consisting of uroporphyrin-III C-methyltransferase%2C precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase%3B catalyzes the methylation of uroporphyrinogen III to form precorrin-2%2C then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin'';gbkey=CDS;gene=cysG;product=siroheme synthase;protein_id=YP_404998.1;transl_table=11
NC_007606.1	RefSeq	region	3266246	3267011	.	-	.	ID=id540;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3266260	3266655	.	-	.	ID=gene3469;Dbxref=GeneID:3798132;Name=SDY_3531;Note=SDY3531;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3531
NC_007606.1	RefSeq	CDS	3266260	3266655	.	-	0	ID=cds3077;Parent=gene3469;Dbxref=Genbank:YP_404999.1,GeneID:3798132;Name=YP_404999.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_404999.1;transl_table=11
NC_007606.1	RefSeq	gene	3266877	3268271	.	+	.	ID=gene3470;Dbxref=GeneID:3798133;Name=gadA;Note=SDY3532;gbkey=Gene;gene=gadA;gene_biotype=protein_coding;locus_tag=SDY_3532
NC_007606.1	RefSeq	CDS	3266877	3268271	.	+	0	ID=cds3078;Parent=gene3470;Dbxref=Genbank:YP_405000.1,GeneID:3798133;Name=YP_405000.1;Note=Code: E%3B COG: COG0076;gbkey=CDS;gene=gadA;product=glutamate decarboxylase;protein_id=YP_405000.1;transl_table=11
NC_007606.1	RefSeq	gene	3268639	3269463	.	+	.	ID=gene3471;Dbxref=GeneID:3798134;Name=yhiX;Note=SDY3533;gbkey=Gene;gene=yhiX;gene_biotype=protein_coding;locus_tag=SDY_3533
NC_007606.1	RefSeq	CDS	3268639	3269463	.	+	0	ID=cds3079;Parent=gene3471;Dbxref=Genbank:YP_405001.1,GeneID:3798134;Name=YP_405001.1;Note=regulates genes in response to acid and/or during stationary phase;gbkey=CDS;gene=yhiX;product=DNA-binding transcriptional regulator GadX;protein_id=YP_405001.1;transl_table=11
NC_007606.1	RefSeq	region	3269951	3270716	.	-	.	ID=id541;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3269965	3270360	.	-	.	ID=gene3472;Dbxref=GeneID:3798136;Name=SDY_3535;Note=SDY3535;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3535
NC_007606.1	RefSeq	CDS	3269965	3270360	.	-	0	ID=cds3080;Parent=gene3472;Dbxref=Genbank:YP_405002.1,GeneID:3798136;Name=YP_405002.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405002.1;transl_table=11
NC_007606.1	RefSeq	gene	3271688	3274807	.	-	.	ID=gene3473;Dbxref=GeneID:3796766;Name=yhiV;Note=SDY3537;gbkey=Gene;gene=yhiV;gene_biotype=protein_coding;locus_tag=SDY_3537
NC_007606.1	RefSeq	CDS	3271688	3274807	.	-	0	ID=cds3081;Parent=gene3473;Dbxref=Genbank:YP_405004.1,GeneID:3796766;Name=YP_405004.1;Note=Code: V%3B COG: COG0841;gbkey=CDS;gene=yhiV;product=transport system permease;protein_id=YP_405004.1;transl_table=11
NC_007606.1	RefSeq	gene	3274832	3275986	.	-	.	ID=gene3474;Dbxref=GeneID:3796767;Name=yhiU;Note=SDY3538;gbkey=Gene;gene=yhiU;gene_biotype=protein_coding;locus_tag=SDY_3538
NC_007606.1	RefSeq	CDS	3274832	3275986	.	-	0	ID=cds3082;Parent=gene3474;Dbxref=Genbank:YP_405005.1,GeneID:3796767;Name=YP_405005.1;Note=''with MdtF and tolC is involved in resistance to rhodamine 6G%2C erythromycin%2C doxorubicin and other compounds'';gbkey=CDS;gene=yhiU;product=multidrug efflux system protein MdtE;protein_id=YP_405005.1;transl_table=11
NC_007606.1	RefSeq	gene	3276325	3276852	.	-	.	ID=gene3475;Dbxref=GeneID:3796768;Name=yhiE;Note=SDY3539;gbkey=Gene;gene=yhiE;gene_biotype=protein_coding;locus_tag=SDY_3539
NC_007606.1	RefSeq	CDS	3276325	3276852	.	-	0	ID=cds3083;Parent=gene3475;Dbxref=Genbank:YP_405006.1,GeneID:3796768;Name=YP_405006.1;Note=Code: K%3B COG: COG2771;gbkey=CDS;gene=yhiE;product=hypothetical protein;protein_id=YP_405006.1;transl_table=11
NC_007606.1	RefSeq	region	3277515	3278282	.	+	.	ID=id542;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3277570	3277845	.	+	.	ID=gene3476;Dbxref=GeneID:3796769;Name=insA;Note=SDY3540;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3540
NC_007606.1	RefSeq	CDS	3277570	3277845	.	+	0	ID=cds3084;Parent=gene3476;Dbxref=Genbank:YP_405007.1,GeneID:3796769;Name=YP_405007.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405007.1;transl_table=11
NC_007606.1	RefSeq	gene	3277890	3278267	.	+	.	ID=gene3477;Dbxref=GeneID:3796770;Name=insB;Note=SDY3541;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3541
NC_007606.1	RefSeq	CDS	3277890	3278267	.	+	0	ID=cds3085;Parent=gene3477;Dbxref=Genbank:YP_405008.1,GeneID:3796770;Name=YP_405008.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405008.1;transl_table=11
NC_007606.1	RefSeq	gene	3278429	3279001	.	-	.	ID=gene3478;Dbxref=GeneID:3796771;Name=hdeD;Note=SDY3542;gbkey=Gene;gene=hdeD;gene_biotype=protein_coding;locus_tag=SDY_3542
NC_007606.1	RefSeq	CDS	3278429	3279001	.	-	0	ID=cds3086;Parent=gene3478;Dbxref=Genbank:YP_405009.1,GeneID:3796771;Name=YP_405009.1;Note=Code: S%3B COG: COG3247;gbkey=CDS;gene=hdeD;product=acid-resistance membrane protein;protein_id=YP_405009.1;transl_table=11
NC_007606.1	RefSeq	gene	3279256	3279588	.	+	.	ID=gene3479;Dbxref=GeneID:3796772;Name=hdeA;Note=SDY3543;gbkey=Gene;gene=hdeA;gene_biotype=protein_coding;locus_tag=SDY_3543
NC_007606.1	RefSeq	CDS	3279256	3279588	.	+	0	ID=cds3087;Parent=gene3479;Dbxref=Genbank:YP_405010.1,GeneID:3796772;Name=YP_405010.1;Note=inactive form;gbkey=CDS;gene=hdeA;product=acid-resistance protein;protein_id=YP_405010.1;transl_table=11
NC_007606.1	RefSeq	gene	3279692	3280030	.	+	.	ID=gene3480;Dbxref=GeneID:3796773;Name=hdeB;Note=SDY3544;gbkey=Gene;gene=hdeB;gene_biotype=protein_coding;locus_tag=SDY_3544
NC_007606.1	RefSeq	CDS	3279692	3280030	.	+	0	ID=cds3088;Parent=gene3480;Dbxref=Genbank:YP_405011.1,GeneID:3796773;Name=YP_405011.1;gbkey=CDS;gene=hdeB;product=acid-resistance protein;protein_id=YP_405011.1;transl_table=11
NC_007606.1	RefSeq	gene	3280153	3281514	.	+	.	ID=gene3481;Dbxref=GeneID:3796774;Name=yhiD;Note=SDY3545%3B contains iso-IS1 insertion%3B original product:  transport ATPase;gbkey=Gene;gene=yhiD;gene_biotype=pseudogene;locus_tag=SDY_3545;pseudo=true
NC_007606.1	RefSeq	region	3280352	3281117	.	-	.	ID=id543;gbkey=mobile_element;gene=yhiD
NC_007606.1	RefSeq	gene	3280366	3280761	.	-	.	ID=gene3482;Dbxref=GeneID:3796775;Name=SDY_3546;Note=SDY3546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3546
NC_007606.1	RefSeq	CDS	3280366	3280761	.	-	0	ID=cds3089;Parent=gene3482;Dbxref=Genbank:YP_405012.1,GeneID:3796775;Name=YP_405012.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405012.1;transl_table=11
NC_007606.1	RefSeq	gene	3280788	3281060	.	-	.	ID=gene3483;Dbxref=GeneID:18263142;Name=SDY_4756;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4756
NC_007606.1	RefSeq	CDS	3280788	3281060	.	-	0	ID=cds3090;Parent=gene3483;Dbxref=Genbank:YP_009000828.1,GeneID:18263142;Name=YP_009000828.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000828.1;transl_table=11
NC_007606.1	RefSeq	gene	3281566	3282336	.	-	.	ID=gene3484;Dbxref=GeneID:3796776;Name=hmuV;Note=SDY3547;gbkey=Gene;gene=hmuV;gene_biotype=protein_coding;locus_tag=SDY_3547
NC_007606.1	RefSeq	CDS	3281566	3282336	.	-	0	ID=cds3091;Parent=gene3484;Dbxref=Genbank:YP_405013.1,GeneID:3796776;Name=YP_405013.1;Note=with HmuTU is involved in the transport of hemin;gbkey=CDS;gene=hmuV;product=hemin importer ATP-binding subunit;protein_id=YP_405013.1;transl_table=11
NC_007606.1	RefSeq	gene	3282333	3283289	.	-	.	ID=gene3485;Dbxref=GeneID:3796777;Name=shuU;Note=SDY3548;gbkey=Gene;gene=shuU;gene_biotype=protein_coding;locus_tag=SDY_3548
NC_007606.1	RefSeq	CDS	3282333	3283289	.	-	0	ID=cds3092;Parent=gene3485;Dbxref=Genbank:YP_405014.1,GeneID:3796777;Name=YP_405014.1;Note=Code: P%3B COG: COG0609;gbkey=CDS;gene=shuU;product=iron compound ABC transporter permease;protein_id=YP_405014.1;transl_table=11
NC_007606.1	RefSeq	gene	3283376	3283999	.	-	.	ID=gene3486;Dbxref=GeneID:3796778;Name=shuY;Note=SDY3549;gbkey=Gene;gene=shuY;gene_biotype=protein_coding;locus_tag=SDY_3549
NC_007606.1	RefSeq	CDS	3283376	3283999	.	-	0	ID=cds3093;Parent=gene3486;Dbxref=Genbank:YP_405015.1,GeneID:3796778;Name=YP_405015.1;Note=Code: MG%3B COG: COG0702;gbkey=CDS;gene=shuY;product=hypothetical protein;protein_id=YP_405015.1;transl_table=11
NC_007606.1	RefSeq	gene	3283999	3284493	.	-	.	ID=gene3487;Dbxref=GeneID:3796779;Name=shuX;Note=SDY3550;gbkey=Gene;gene=shuX;gene_biotype=protein_coding;locus_tag=SDY_3550
NC_007606.1	RefSeq	CDS	3283999	3284493	.	-	0	ID=cds3094;Parent=gene3487;Dbxref=Genbank:YP_405016.1,GeneID:3796779;Name=YP_405016.1;Note=Code: P%3B COG: COG3721;gbkey=CDS;gene=shuX;product=hypothetical protein;protein_id=YP_405016.1;transl_table=11
NC_007606.1	RefSeq	gene	3284506	3285843	.	-	.	ID=gene3488;Dbxref=GeneID:3796780;Name=shuW;Note=SDY3551%3B contains in-frame stop codon%3B original product:  oxygen independent coproporphyrinogen III oxidase;gbkey=Gene;gene=shuW;gene_biotype=pseudogene;locus_tag=SDY_3551;pseudo=true
NC_007606.1	RefSeq	gene	3285863	3286855	.	-	.	ID=gene3489;Dbxref=GeneID:3796781;Name=shuT;Note=SDY3552;gbkey=Gene;gene=shuT;gene_biotype=protein_coding;locus_tag=SDY_3552
NC_007606.1	RefSeq	CDS	3285863	3286855	.	-	0	ID=cds3095;Parent=gene3489;Dbxref=Genbank:YP_405017.1,GeneID:3796781;Name=YP_405017.1;Note=Code: P%3B COG: COG4558;gbkey=CDS;gene=shuT;product=periplasmic binding protein;protein_id=YP_405017.1;transl_table=11
NC_007606.1	RefSeq	gene	3286885	3287181	.	+	.	ID=gene3490;Dbxref=GeneID:3796782;Name=SDY_3553;Note=SDY3553;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3553
NC_007606.1	RefSeq	CDS	3286885	3287181	.	+	0	ID=cds3096;Parent=gene3490;Dbxref=Genbank:YP_405018.1,GeneID:3796782;Name=YP_405018.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405018.1;transl_table=11
NC_007606.1	RefSeq	gene	3287457	3289439	.	+	.	ID=gene3491;Dbxref=GeneID:3796783;Name=shuA;Note=SDY3554;gbkey=Gene;gene=shuA;gene_biotype=protein_coding;locus_tag=SDY_3554
NC_007606.1	RefSeq	CDS	3287457	3289439	.	+	0	ID=cds3097;Parent=gene3491;Dbxref=Genbank:YP_405019.1,GeneID:3796783;Name=YP_405019.1;Note=Code: P%3B COG: COG1629;gbkey=CDS;gene=shuA;product=outer membrane heme/hemoglobin receptor;protein_id=YP_405019.1;transl_table=11
NC_007606.1	RefSeq	gene	3289488	3290516	.	+	.	ID=gene3492;Dbxref=GeneID:3796784;Name=shuS;Note=SDY3555;gbkey=Gene;gene=shuS;gene_biotype=protein_coding;locus_tag=SDY_3555
NC_007606.1	RefSeq	CDS	3289488	3290516	.	+	0	ID=cds3098;Parent=gene3492;Dbxref=Genbank:YP_405020.1,GeneID:3796784;Name=YP_405020.1;Note=Code: P%3B COG: COG3720;gbkey=CDS;gene=shuS;product=heme/hemoglobin transport protein;protein_id=YP_405020.1;transl_table=11
NC_007606.1	RefSeq	gene	3290577	3291107	.	-	.	ID=gene3493;Dbxref=GeneID:3799940;Name=yhiF;Note=SDY3556;gbkey=Gene;gene=yhiF;gene_biotype=protein_coding;locus_tag=SDY_3556
NC_007606.1	RefSeq	CDS	3290577	3291107	.	-	0	ID=cds3099;Parent=gene3493;Dbxref=Genbank:YP_405021.1,GeneID:3799940;Name=YP_405021.1;Note=Code: K%3B COG: COG2771;gbkey=CDS;gene=yhiF;product=hypothetical protein;protein_id=YP_405021.1;transl_table=11
NC_007606.1	RefSeq	gene	3291263	3291862	.	-	.	ID=gene3494;Dbxref=GeneID:3799941;Name=slp;Note=SDY3557;gbkey=Gene;gene=slp;gene_biotype=protein_coding;locus_tag=SDY_3557
NC_007606.1	RefSeq	CDS	3291263	3291862	.	-	0	ID=cds3100;Parent=gene3494;Dbxref=Genbank:YP_405022.1,GeneID:3799941;Name=YP_405022.1;Note=Code: M%3B COG: COG3065;gbkey=CDS;gene=slp;product=hypothetical protein;protein_id=YP_405022.1;transl_table=11
NC_007606.1	RefSeq	region	3292160	3292932	.	+	.	ID=id544;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3292224	3292496	.	+	.	ID=gene3495;Dbxref=GeneID:18263143;Name=SDY_4757;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4757
NC_007606.1	RefSeq	CDS	3292224	3292496	.	+	0	ID=cds3101;Parent=gene3495;Dbxref=Genbank:YP_009000829.1,GeneID:18263143;Name=YP_009000829.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000829.1;transl_table=11
NC_007606.1	RefSeq	gene	3292523	3292918	.	+	.	ID=gene3496;Dbxref=GeneID:3799942;Name=SDY_3558;Note=SDY3558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3558
NC_007606.1	RefSeq	CDS	3292523	3292918	.	+	0	ID=cds3102;Parent=gene3496;Dbxref=Genbank:YP_405023.1,GeneID:3799942;Name=YP_405023.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405023.1;transl_table=11
NC_007606.1	RefSeq	gene	3293052	3293477	.	-	.	ID=gene3497;Dbxref=GeneID:3799943;Name=arsC;Note=SDY3559;gbkey=Gene;gene=arsC;gene_biotype=protein_coding;locus_tag=SDY_3559
NC_007606.1	RefSeq	CDS	3293052	3293477	.	-	0	ID=cds3103;Parent=gene3497;Dbxref=Genbank:YP_405024.1,GeneID:3799943;Name=YP_405024.1;Note=Code: P%3B COG: COG1393;gbkey=CDS;gene=arsC;product=arsenate reductase;protein_id=YP_405024.1;transl_table=11
NC_007606.1	RefSeq	gene	3293490	3294800	.	-	.	ID=gene3498;Dbxref=GeneID:3799944;Name=arsB;Note=SDY3560;gbkey=Gene;gene=arsB;gene_biotype=protein_coding;locus_tag=SDY_3560
NC_007606.1	RefSeq	CDS	3293490	3294800	.	-	0	ID=cds3104;Parent=gene3498;Dbxref=Genbank:YP_405025.1,GeneID:3799944;Name=YP_405025.1;Note=Code: P%3B COG: COG1055;gbkey=CDS;gene=arsB;product=arsenical pump membrane protein;protein_id=YP_405025.1;transl_table=11
NC_007606.1	RefSeq	gene	3294834	3295187	.	-	.	ID=gene3499;Dbxref=GeneID:3799945;Name=arsR;Note=SDY3561;gbkey=Gene;gene=arsR;gene_biotype=protein_coding;locus_tag=SDY_3561
NC_007606.1	RefSeq	CDS	3294834	3295187	.	-	0	ID=cds3105;Parent=gene3499;Dbxref=Genbank:YP_405026.1,GeneID:3799945;Name=YP_405026.1;Note=regulates the expression of of the arsRBC involved in resistance to arsenic;gbkey=CDS;gene=arsR;product=DNA-binding transcriptional repressor ArsR;protein_id=YP_405026.1;transl_table=11
NC_007606.1	RefSeq	gene	3296067	3297419	.	-	.	ID=gene3500;Dbxref=GeneID:3799946;Name=gor;Note=SDY3562;gbkey=Gene;gene=gor;gene_biotype=protein_coding;locus_tag=SDY_3562
NC_007606.1	RefSeq	CDS	3296067	3297419	.	-	0	ID=cds3106;Parent=gene3500;Dbxref=Genbank:YP_405027.1,GeneID:3799946;Name=YP_405027.1;Note=catalyzes the reduction of 2 glutathione to glutathione disulfide%3B maintains high levels of reduced glutathione in the cytosol%3B involved in redox regulation and oxidative defense;gbkey=CDS;gene=gor;product=glutathione reductase;protein_id=YP_405027.1;transl_table=11
NC_007606.1	RefSeq	gene	3297491	3298333	.	-	.	ID=gene3501;Dbxref=GeneID:3799947;Name=yhiR;Note=SDY3563;gbkey=Gene;gene=yhiR;gene_biotype=protein_coding;locus_tag=SDY_3563
NC_007606.1	RefSeq	CDS	3297491	3298333	.	-	0	ID=cds3107;Parent=gene3501;Dbxref=Genbank:YP_405028.1,GeneID:3799947;Name=YP_405028.1;Note=Code: R%3B COG: COG2961;gbkey=CDS;gene=yhiR;product=hypothetical protein;protein_id=YP_405028.1;transl_table=11
NC_007606.1	RefSeq	gene	3298536	3300578	.	+	.	ID=gene3502;Dbxref=GeneID:3799948;Name=prlC;Note=SDY3564;gbkey=Gene;gene=prlC;gene_biotype=protein_coding;locus_tag=SDY_3564
NC_007606.1	RefSeq	CDS	3298536	3300578	.	+	0	ID=cds3108;Parent=gene3502;Dbxref=Genbank:YP_405029.1,GeneID:3799948;Name=YP_405029.1;Note=Code: E%3B COG: COG0339;gbkey=CDS;gene=prlC;product=oligopeptidase A;protein_id=YP_405029.1;transl_table=11
NC_007606.1	RefSeq	gene	3300584	3301336	.	+	.	ID=gene3503;Dbxref=GeneID:3799949;Name=yhiQ;Note=SDY3565;gbkey=Gene;gene=yhiQ;gene_biotype=protein_coding;locus_tag=SDY_3565
NC_007606.1	RefSeq	CDS	3300584	3301336	.	+	0	ID=cds3109;Parent=gene3503;Dbxref=Genbank:YP_405030.1,GeneID:3799949;Name=YP_405030.1;Note=predicted SAM-dependent methyltransferase;gbkey=CDS;gene=yhiQ;product=methyltransferase;protein_id=YP_405030.1;transl_table=11
NC_007606.1	RefSeq	gene	3303167	3303601	.	-	.	ID=gene3504;Dbxref=GeneID:3799951;Name=uspA;Note=SDY3567;gbkey=Gene;gene=uspA;gene_biotype=protein_coding;locus_tag=SDY_3567
NC_007606.1	RefSeq	CDS	3303167	3303601	.	-	0	ID=cds3110;Parent=gene3504;Dbxref=Genbank:YP_405032.1,GeneID:3799951;Name=YP_405032.1;Note=Code: T%3B COG: COG0589;gbkey=CDS;gene=uspA;product=universal stress protein;protein_id=YP_405032.1;transl_table=11
NC_007606.1	RefSeq	gene	3303992	3304327	.	+	.	ID=gene3505;Dbxref=GeneID:3799952;Name=yhiO;Note=SDY3568;gbkey=Gene;gene=yhiO;gene_biotype=protein_coding;locus_tag=SDY_3568
NC_007606.1	RefSeq	CDS	3303992	3304327	.	+	0	ID=cds3111;Parent=gene3505;Dbxref=Genbank:YP_405033.1,GeneID:3799952;Name=YP_405033.1;Note=''ppGpp-dependent%2C membrane associated%2C stress protein produced under conditions of nutrient deprivation%2C osmotic shock and oxidative stress'';gbkey=CDS;gene=yhiO;product=universal stress protein UspB;protein_id=YP_405033.1;transl_table=11
NC_007606.1	RefSeq	gene	3304398	3305897	.	-	.	ID=gene3506;Dbxref=GeneID:3799953;Name=pitA;Note=SDY3569;gbkey=Gene;gene=pitA;gene_biotype=protein_coding;locus_tag=SDY_3569
NC_007606.1	RefSeq	CDS	3304398	3305897	.	-	0	ID=cds3112;Parent=gene3506;Dbxref=Genbank:YP_405034.1,GeneID:3799953;Name=YP_405034.1;Note=Code: P%3B COG: COG0306;gbkey=CDS;gene=pitA;product=low-affinity phosphate transport protein;protein_id=YP_405034.1;transl_table=11
NC_007606.1	RefSeq	gene	3306129	3307331	.	+	.	ID=gene3507;Dbxref=GeneID:3799954;Name=yhiN;Note=SDY3570;gbkey=Gene;gene=yhiN;gene_biotype=protein_coding;locus_tag=SDY_3570
NC_007606.1	RefSeq	CDS	3306129	3307331	.	+	0	ID=cds3113;Parent=gene3507;Dbxref=Genbank:YP_405035.1,GeneID:3799954;Name=YP_405035.1;Note=Code: R%3B COG: COG2081;gbkey=CDS;gene=yhiN;product=hypothetical protein;protein_id=YP_405035.1;transl_table=11
NC_007606.1	RefSeq	region	3307339	3308105	.	+	.	ID=id545;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3307396	3307668	.	+	.	ID=gene3508;Dbxref=GeneID:18263144;Name=SDY_4758;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4758
NC_007606.1	RefSeq	CDS	3307396	3307668	.	+	0	ID=cds3114;Parent=gene3508;Dbxref=Genbank:YP_009000830.1,GeneID:18263144;Name=YP_009000830.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000830.1;transl_table=11
NC_007606.1	RefSeq	gene	3308101	3308858	.	-	.	ID=gene3509;Dbxref=GeneID:3799956;Name=SDY_3572;Note=SDY3572;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3572;pseudo=true;pseudogene=allelic
NC_007606.1	RefSeq	gene	3308987	3311434	.	-	.	ID=gene3510;Dbxref=GeneID:3799958;Name=glgP;Note=SDY3574;gbkey=Gene;gene=glgP;gene_biotype=protein_coding;locus_tag=SDY_3574
NC_007606.1	RefSeq	CDS	3308987	3311434	.	-	0	ID=cds3115;Parent=gene3510;Dbxref=Genbank:YP_405039.1,GeneID:3799958;Name=YP_405039.1;Note=Code: G%3B COG: COG0058;gbkey=CDS;gene=glgP;product=glycogen phosphorylase;protein_id=YP_405039.1;transl_table=11
NC_007606.1	RefSeq	gene	3311453	3312886	.	-	.	ID=gene3511;Dbxref=GeneID:3799959;Name=glgA;Note=SDY3575;gbkey=Gene;gene=glgA;gene_biotype=protein_coding;locus_tag=SDY_3575
NC_007606.1	RefSeq	CDS	3311453	3312886	.	-	0	ID=cds3116;Parent=gene3511;Dbxref=Genbank:YP_405040.1,GeneID:3799959;Name=YP_405040.1;Note=''catalyzes the formation of alpha-1%2C4-glucan chains from ADP-glucose'';gbkey=CDS;gene=glgA;product=glycogen synthase;protein_id=YP_405040.1;transl_table=11
NC_007606.1	RefSeq	gene	3312886	3314181	.	-	.	ID=gene3512;Dbxref=GeneID:3798292;Name=glgC;Note=SDY3576;gbkey=Gene;gene=glgC;gene_biotype=protein_coding;locus_tag=SDY_3576
NC_007606.1	RefSeq	CDS	3312886	3314181	.	-	0	ID=cds3117;Parent=gene3512;Dbxref=Genbank:YP_405041.1,GeneID:3798292;Name=YP_405041.1;Note=catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate;gbkey=CDS;gene=glgC;product=glucose-1-phosphate adenylyltransferase;protein_id=YP_405041.1;transl_table=11
NC_007606.1	RefSeq	gene	3314199	3316172	.	-	.	ID=gene3513;Dbxref=GeneID:3798293;Name=glgX;Note=SDY3577;gbkey=Gene;gene=glgX;gene_biotype=protein_coding;locus_tag=SDY_3577
NC_007606.1	RefSeq	CDS	3314199	3316172	.	-	0	ID=cds3118;Parent=gene3513;Dbxref=Genbank:YP_405042.1,GeneID:3798293;Name=YP_405042.1;Note=''catalyzes the hydrolysis of the alpha-1%2C6-glucosidic linkages in partially depolymerized glycogen'';gbkey=CDS;gene=glgX;product=glycogen debranching protein;protein_id=YP_405042.1;transl_table=11
NC_007606.1	RefSeq	gene	3316169	3318355	.	-	.	ID=gene3514;Dbxref=GeneID:3798294;Name=glgB;Note=SDY3578;gbkey=Gene;gene=glgB;gene_biotype=protein_coding;locus_tag=SDY_3578
NC_007606.1	RefSeq	CDS	3316169	3318355	.	-	0	ID=cds3119;Parent=gene3514;Dbxref=Genbank:YP_405043.1,GeneID:3798294;Name=YP_405043.1;Note=''catalyzes the transfer of a segment of a 1%2C4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain'';gbkey=CDS;gene=glgB;product=glycogen branching protein;protein_id=YP_405043.1;transl_table=11
NC_007606.1	RefSeq	gene	3318628	3319731	.	-	.	ID=gene3515;Dbxref=GeneID:3798295;Name=asd;Note=SDY3579;gbkey=Gene;gene=asd;gene_biotype=protein_coding;locus_tag=SDY_3579
NC_007606.1	RefSeq	CDS	3318628	3319731	.	-	0	ID=cds3120;Parent=gene3515;Dbxref=Genbank:YP_405044.1,GeneID:3798295;Name=YP_405044.1;Note=catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde;gbkey=CDS;gene=asd;product=aspartate-semialdehyde dehydrogenase;protein_id=YP_405044.1;transl_table=11
NC_007606.1	RefSeq	gene	3319923	3320516	.	+	.	ID=gene3516;Dbxref=GeneID:3798296;Name=yhgN;Note=SDY3580;gbkey=Gene;gene=yhgN;gene_biotype=protein_coding;locus_tag=SDY_3580
NC_007606.1	RefSeq	CDS	3319923	3320516	.	+	0	ID=cds3121;Parent=gene3516;Dbxref=Genbank:YP_405045.1,GeneID:3798296;Name=YP_405045.1;Note=''YhgN%3B Ec0197%3B hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate%3B seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group%3B shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP%2C dCTP%2C dGTP%2C and dTTP)'';gbkey=CDS;gene=yhgN;product=dITP- and XTP- hydrolase;protein_id=YP_405045.1;transl_table=11
NC_007606.1	RefSeq	gene	3320562	3321857	.	-	.	ID=gene3517;Dbxref=GeneID:3798297;Name=SDY_3581;Note=SDY3581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3581
NC_007606.1	RefSeq	CDS	3320562	3321857	.	-	0	ID=cds3122;Parent=gene3517;Dbxref=Genbank:YP_405046.1,GeneID:3798297;Name=YP_405046.1;Note=Code: LU%3B COG: COG0758;gbkey=CDS;product=DNA processing protein;protein_id=YP_405046.1;transl_table=11
NC_007606.1	RefSeq	gene	3322235	3322723	.	-	.	ID=gene3518;Dbxref=GeneID:3798298;Name=SDY_3582;Note=SDY3582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3582
NC_007606.1	RefSeq	CDS	3322235	3322723	.	-	0	ID=cds3123;Parent=gene3518;Dbxref=Genbank:YP_405047.1,GeneID:3798298;Name=YP_405047.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405047.1;transl_table=11
NC_007606.1	RefSeq	region	3322646	3323411	.	+	.	ID=id546;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3322703	3322975	.	+	.	ID=gene3519;Dbxref=GeneID:18263145;Name=SDY_4759;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4759
NC_007606.1	RefSeq	CDS	3322703	3322975	.	+	0	ID=cds3124;Parent=gene3519;Dbxref=Genbank:YP_009000831.1,GeneID:18263145;Name=YP_009000831.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000831.1;transl_table=11
NC_007606.1	RefSeq	gene	3323002	3323397	.	+	.	ID=gene3520;Dbxref=GeneID:3798299;Name=SDY_3583;Note=SDY3583;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3583
NC_007606.1	RefSeq	CDS	3323002	3323397	.	+	0	ID=cds3125;Parent=gene3520;Dbxref=Genbank:YP_405048.1,GeneID:3798299;Name=YP_405048.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405048.1;transl_table=11
NC_007606.1	RefSeq	region	3323490	3324257	.	+	.	ID=id547;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3323545	3323820	.	+	.	ID=gene3521;Dbxref=GeneID:3798300;Name=insA;Note=SDY3584;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3584
NC_007606.1	RefSeq	CDS	3323545	3323820	.	+	0	ID=cds3126;Parent=gene3521;Dbxref=Genbank:YP_405049.1,GeneID:3798300;Name=YP_405049.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405049.1;transl_table=11
NC_007606.1	RefSeq	gene	3323865	3324242	.	+	.	ID=gene3522;Dbxref=GeneID:3798301;Name=insB;Note=SDY3585;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3585
NC_007606.1	RefSeq	CDS	3323865	3324242	.	+	0	ID=cds3127;Parent=gene3522;Dbxref=Genbank:YP_405050.1,GeneID:3798301;Name=YP_405050.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405050.1;transl_table=11
NC_007606.1	RefSeq	gene	3324253	3325410	.	-	.	ID=gene3523;Dbxref=GeneID:3798302;Name=SDY_3586;Note=SDY3586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3586
NC_007606.1	RefSeq	CDS	3324253	3325410	.	-	0	ID=cds3128;Parent=gene3523;Dbxref=Genbank:YP_405051.1,GeneID:3798302;Name=YP_405051.1;Note=Code: L%3B COG: COG0514;gbkey=CDS;product=hypothetical protein;protein_id=YP_405051.1;transl_table=11
NC_007606.1	RefSeq	gene	3325550	3326890	.	-	.	ID=gene3524;Dbxref=GeneID:3798303;Name=gntU;Note=SDY3587;gbkey=Gene;gene=gntU;gene_biotype=protein_coding;locus_tag=SDY_3587
NC_007606.1	RefSeq	CDS	3325550	3326890	.	-	0	ID=cds3129;Parent=gene3524;Dbxref=Genbank:YP_405052.1,GeneID:3798303;Name=YP_405052.1;Note=Code: GE%3B COG: COG2610;gbkey=CDS;gene=gntU;product=low affinity gluconate transporter;protein_id=YP_405052.1;transl_table=11
NC_007606.1	RefSeq	gene	3326894	3327421	.	-	.	ID=gene3525;Dbxref=GeneID:3798304;Name=gntK;Note=SDY3588;gbkey=Gene;gene=gntK;gene_biotype=protein_coding;locus_tag=SDY_3588
NC_007606.1	RefSeq	CDS	3326894	3327421	.	-	0	ID=cds3130;Parent=gene3525;Dbxref=Genbank:YP_405053.2,GeneID:3798304;Name=YP_405053.2;Note=thermoresistant%3B catalyzes the formation of 6-phospho-D-gluconate from gluconate;gbkey=CDS;gene=gntK;product=gluconate kinase;protein_id=YP_405053.2;transl_table=11
NC_007606.1	RefSeq	gene	3327560	3328498	.	-	.	ID=gene3526;Dbxref=GeneID:3798305;Name=gntR;Note=SDY3589;gbkey=Gene;gene=gntR;gene_biotype=protein_coding;locus_tag=SDY_3589
NC_007606.1	RefSeq	CDS	3327560	3328498	.	-	0	ID=cds3131;Parent=gene3526;Dbxref=Genbank:YP_405054.1,GeneID:3798305;Name=YP_405054.1;Note=Code: K%3B COG: COG1609;gbkey=CDS;gene=gntR;product=gluconate operon regulator;protein_id=YP_405054.1;transl_table=11
NC_007606.1	RefSeq	gene	3328681	3329466	.	-	.	ID=gene3527;Dbxref=GeneID:3798306;Name=yhhW;Note=SDY3590;gbkey=Gene;gene=yhhW;gene_biotype=protein_coding;locus_tag=SDY_3590
NC_007606.1	RefSeq	CDS	3328681	3329466	.	-	0	ID=cds3132;Parent=gene3527;Dbxref=Genbank:YP_405055.1,GeneID:3798306;Name=YP_405055.1;Note=Code: R%3B COG: COG1741;gbkey=CDS;gene=yhhW;product=hypothetical protein;protein_id=YP_405055.1;transl_table=11
NC_007606.1	RefSeq	gene	3329589	3330626	.	-	.	ID=gene3528;Dbxref=GeneID:3798307;Name=yhhX;Note=SDY3591;gbkey=Gene;gene=yhhX;gene_biotype=protein_coding;locus_tag=SDY_3591
NC_007606.1	RefSeq	CDS	3329589	3330626	.	-	0	ID=cds3133;Parent=gene3528;Dbxref=Genbank:YP_405056.1,GeneID:3798307;Name=YP_405056.1;Note=Code: R%3B COG: COG0673;gbkey=CDS;gene=yhhX;product=dehydrogenase;protein_id=YP_405056.1;transl_table=11
NC_007606.1	RefSeq	gene	3330950	3331312	.	+	.	ID=gene3529;Dbxref=GeneID:3798308;Name=yhhY;Note=''SDY3592%3B truncated%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yhhY;gene_biotype=pseudogene;locus_tag=SDY_3592;pseudo=true
NC_007606.1	RefSeq	region	3331312	3332076	.	+	.	ID=id548;gbkey=mobile_element;gene=yhhY
NC_007606.1	RefSeq	gene	3331369	3331641	.	+	.	ID=gene3530;Dbxref=GeneID:18263146;Name=SDY_4760;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4760
NC_007606.1	RefSeq	CDS	3331369	3331641	.	+	0	ID=cds3134;Parent=gene3530;Dbxref=Genbank:YP_009000832.1,GeneID:18263146;Name=YP_009000832.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000832.1;transl_table=11
NC_007606.1	RefSeq	gene	3332237	3333982	.	-	.	ID=gene3531;Dbxref=GeneID:3796650;Name=ggt;Note=SDY3595;gbkey=Gene;gene=ggt;gene_biotype=protein_coding;locus_tag=SDY_3595
NC_007606.1	RefSeq	CDS	3332237	3333982	.	-	0	ID=cds3135;Parent=gene3531;Dbxref=Genbank:YP_405059.1,GeneID:3796650;Name=YP_405059.1;Note=periplasmic enzyme%3B post-translationally processed into two subunits which are required for wild-type enzyme activity%3B cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides;gbkey=CDS;gene=ggt;product=gamma-glutamyltranspeptidase;protein_id=YP_405059.1;transl_table=11
NC_007606.1	RefSeq	gene	3334102	3334542	.	+	.	ID=gene3532;Dbxref=GeneID:3796651;Name=yhhA;Note=SDY3596;gbkey=Gene;gene=yhhA;gene_biotype=protein_coding;locus_tag=SDY_3596
NC_007606.1	RefSeq	CDS	3334102	3334542	.	+	0	ID=cds3136;Parent=gene3532;Dbxref=Genbank:YP_405060.1,GeneID:3796651;Name=YP_405060.1;gbkey=CDS;gene=yhhA;product=hypothetical protein;protein_id=YP_405060.1;transl_table=11
NC_007606.1	RefSeq	gene	3334529	3335261	.	-	.	ID=gene3533;Dbxref=GeneID:3796652;Name=ugpQ;Note=''SDY3597%3B frameshift%3B original product: glycerophosphodiester phosphodiesterase%2C cytosolic'';gbkey=Gene;gene=ugpQ;gene_biotype=pseudogene;locus_tag=SDY_3597;pseudo=true
NC_007606.1	RefSeq	gene	3335258	3336367	.	-	.	ID=gene3534;Dbxref=GeneID:3796653;Name=ugpC;Note=SDY3598%3B contains in-frame stop codon%3B original product: ATP-binding component of sn-glycerol 3-phosphate transport system;gbkey=Gene;gene=ugpC;gene_biotype=pseudogene;locus_tag=SDY_3598;pseudo=true
NC_007606.1	RefSeq	gene	3336330	3337175	.	-	.	ID=gene3535;Dbxref=GeneID:3796654;Name=ugpE;Note=SDY3599;gbkey=Gene;gene=ugpE;gene_biotype=protein_coding;locus_tag=SDY_3599
NC_007606.1	RefSeq	CDS	3336330	3337175	.	-	0	ID=cds3137;Parent=gene3535;Dbxref=Genbank:YP_405061.1,GeneID:3796654;Name=YP_405061.1;Note=with UgpABC is involved in uptake of glycerol-3-phosphate;gbkey=CDS;gene=ugpE;product=glycerol-3-phosphate ABC transporter permease;protein_id=YP_405061.1;transl_table=11
NC_007606.1	RefSeq	gene	3337172	3338059	.	-	.	ID=gene3536;Dbxref=GeneID:3796655;Name=ugpA;Note=SDY3600;gbkey=Gene;gene=ugpA;gene_biotype=protein_coding;locus_tag=SDY_3600
NC_007606.1	RefSeq	CDS	3337172	3338059	.	-	0	ID=cds3138;Parent=gene3536;Dbxref=Genbank:YP_405062.1,GeneID:3796655;Name=YP_405062.1;Note=with UgpEC is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;gene=ugpA;product=glycerol-3-phosphate ABC transporter permease;protein_id=YP_405062.1;transl_table=11
NC_007606.1	RefSeq	gene	3338157	3339473	.	-	.	ID=gene3537;Dbxref=GeneID:3796656;Name=ugpB;Note=SDY3601;gbkey=Gene;gene=ugpB;gene_biotype=protein_coding;locus_tag=SDY_3601
NC_007606.1	RefSeq	CDS	3338157	3339473	.	-	0	ID=cds3139;Parent=gene3537;Dbxref=Genbank:YP_405063.1,GeneID:3796656;Name=YP_405063.1;Note=with UgpACE is involved in the uptake of glycerol-3-phosphate;gbkey=CDS;gene=ugpB;product=glycerol-3-phosphate ABC transporter substrate-binding protein;protein_id=YP_405063.1;transl_table=11
NC_007606.1	RefSeq	gene	3339833	3340579	.	-	.	ID=gene3538;Dbxref=GeneID:3796657;Name=SDY_3602;Note=SDY3602;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3602
NC_007606.1	RefSeq	CDS	3339833	3340579	.	-	0	ID=cds3140;Parent=gene3538;Dbxref=Genbank:YP_405064.1,GeneID:3796657;Name=YP_405064.1;Note=Code: S%3B COG: COG4700;gbkey=CDS;product=hypothetical protein;protein_id=YP_405064.1;transl_table=11
NC_007606.1	RefSeq	gene	3340698	3341411	.	-	.	ID=gene3539;Dbxref=GeneID:3796658;Name=livF;Note=SDY3603;gbkey=Gene;gene=livF;gene_biotype=protein_coding;locus_tag=SDY_3603
NC_007606.1	RefSeq	CDS	3340698	3341411	.	-	0	ID=cds3141;Parent=gene3539;Dbxref=Genbank:YP_405065.2,GeneID:3796658;Name=YP_405065.2;Note=''with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine'';gbkey=CDS;gene=livF;product=leucine/isoleucine/valine ABC transporter ATP-binding protein;protein_id=YP_405065.2;transl_table=11
NC_007606.1	RefSeq	gene	3341413	3342180	.	-	.	ID=gene3540;Dbxref=GeneID:3796659;Name=livG;Note=SDY3604;gbkey=Gene;gene=livG;gene_biotype=protein_coding;locus_tag=SDY_3604
NC_007606.1	RefSeq	CDS	3341413	3342180	.	-	0	ID=cds3142;Parent=gene3540;Dbxref=Genbank:YP_405066.1,GeneID:3796659;Name=YP_405066.1;Note=''Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine'';gbkey=CDS;gene=livG;product=leucine/isoleucine/valine ABC transporter ATP-binding protein;protein_id=YP_405066.1;transl_table=11
NC_007606.1	RefSeq	gene	3342177	3343454	.	-	.	ID=gene3541;Dbxref=GeneID:3796660;Name=livM;Note=SDY3605;gbkey=Gene;gene=livM;gene_biotype=protein_coding;locus_tag=SDY_3605
NC_007606.1	RefSeq	CDS	3342177	3343454	.	-	0	ID=cds3143;Parent=gene3541;Dbxref=Genbank:YP_405067.1,GeneID:3796660;Name=YP_405067.1;Note=''Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids%3B LivFGHMK is specific for the transport of leucine%2C while LivFGHMJ is a transporter for leucine%2C isoleucine%2C and valine'';gbkey=CDS;gene=livM;product=leucine/isoleucine/valine ABC transporter permease;protein_id=YP_405067.1;transl_table=11
NC_007606.1	RefSeq	gene	3343451	3344299	.	-	.	ID=gene3542;Dbxref=GeneID:3796661;Name=livH;Note=SDY3606;gbkey=Gene;gene=livH;gene_biotype=protein_coding;locus_tag=SDY_3606
NC_007606.1	RefSeq	CDS	3343451	3344299	.	-	0	ID=cds3144;Parent=gene3542;Dbxref=Genbank:YP_405068.1,GeneID:3796661;Name=YP_405068.1;Note=Code: E%3B COG: COG0559;gbkey=CDS;gene=livH;product=high-affinity branched-chain amino acid transport system permease;protein_id=YP_405068.1;transl_table=11
NC_007606.1	RefSeq	gene	3344347	3345456	.	-	.	ID=gene3543;Dbxref=GeneID:3796662;Name=livK;Note=SDY3607;gbkey=Gene;gene=livK;gene_biotype=protein_coding;locus_tag=SDY_3607
NC_007606.1	RefSeq	CDS	3344347	3345456	.	-	0	ID=cds3145;Parent=gene3543;Dbxref=Genbank:YP_405069.1,GeneID:3796662;Name=YP_405069.1;Note=Code: E%3B COG: COG0683;gbkey=CDS;gene=livK;product=high-affinity leucine-specific transport system substrate-binding protein;protein_id=YP_405069.1;transl_table=11
NC_007606.1	RefSeq	region	3345510	3346277	.	-	.	ID=id549;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3345525	3345902	.	-	.	ID=gene3544;Dbxref=GeneID:3796663;Name=insB;Note=SDY3608;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3608
NC_007606.1	RefSeq	CDS	3345525	3345902	.	-	0	ID=cds3146;Parent=gene3544;Dbxref=Genbank:YP_405070.1,GeneID:3796663;Name=YP_405070.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405070.1;transl_table=11
NC_007606.1	RefSeq	gene	3345947	3346222	.	-	.	ID=gene3545;Dbxref=GeneID:3796664;Name=insA;Note=SDY3609;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3609
NC_007606.1	RefSeq	CDS	3345947	3346222	.	-	0	ID=cds3147;Parent=gene3545;Dbxref=Genbank:YP_405071.1,GeneID:3796664;Name=YP_405071.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405071.1;transl_table=11
NC_007606.1	RefSeq	gene	3346657	3347040	.	+	.	ID=gene3546;Dbxref=GeneID:3796665;Name=yhhK;Note=SDY3610;gbkey=Gene;gene=yhhK;gene_biotype=protein_coding;locus_tag=SDY_3610
NC_007606.1	RefSeq	CDS	3346657	3347040	.	+	0	ID=cds3148;Parent=gene3546;Dbxref=Genbank:YP_405072.1,GeneID:3796665;Name=YP_405072.1;gbkey=CDS;gene=yhhK;product=hypothetical protein;protein_id=YP_405072.1;transl_table=11
NC_007606.1	RefSeq	gene	3347240	3348400	.	-	.	ID=gene3547;Dbxref=GeneID:3796666;Name=livJ;Note=SDY3611;gbkey=Gene;gene=livJ;gene_biotype=protein_coding;locus_tag=SDY_3611
NC_007606.1	RefSeq	CDS	3347240	3348400	.	-	0	ID=cds3149;Parent=gene3547;Dbxref=Genbank:YP_405073.1,GeneID:3796666;Name=YP_405073.1;Note=Code: E%3B COG: COG0683;gbkey=CDS;gene=livJ;product=high-affinity amino acid transport system substrate-binding protein;protein_id=YP_405073.1;transl_table=11
NC_007606.1	RefSeq	gene	3348614	3349468	.	-	.	ID=gene3548;Dbxref=GeneID:3796667;Name=rpoH;Note=SDY3612;gbkey=Gene;gene=rpoH;gene_biotype=protein_coding;locus_tag=SDY_3612
NC_007606.1	RefSeq	CDS	3348614	3349468	.	-	0	ID=cds3150;Parent=gene3548;Dbxref=Genbank:YP_405074.1,GeneID:3796667;Name=YP_405074.1;Note=binds with the catalytic core of RNA polymerase to produce the holoenzyme%3B this sigma factor is responsible for the expression of heat shock promoters;gbkey=CDS;gene=rpoH;product=RNA polymerase factor sigma-32;protein_id=YP_405074.1;transl_table=11
NC_007606.1	RefSeq	gene	3349713	3350771	.	-	.	ID=gene3549;Dbxref=GeneID:3796668;Name=ftsX;Note=SDY3613;gbkey=Gene;gene=ftsX;gene_biotype=protein_coding;locus_tag=SDY_3613
NC_007606.1	RefSeq	CDS	3349713	3350771	.	-	0	ID=cds3151;Parent=gene3549;Dbxref=Genbank:YP_405075.1,GeneID:3796668;Name=YP_405075.1;Note=''ABC transporter%2C membrane protein'';gbkey=CDS;gene=ftsX;product=cell division protein FtsX;protein_id=YP_405075.1;transl_table=11
NC_007606.1	RefSeq	gene	3350764	3351432	.	-	.	ID=gene3550;Dbxref=GeneID:3796669;Name=ftsE;Note=SDY3614;gbkey=Gene;gene=ftsE;gene_biotype=protein_coding;locus_tag=SDY_3614
NC_007606.1	RefSeq	CDS	3350764	3351432	.	-	0	ID=cds3152;Parent=gene3550;Dbxref=Genbank:YP_405076.1,GeneID:3796669;Name=YP_405076.1;Note=''ATP-binding protein of an ATP-binding cassette transporter%3B when bound to FtsX%2C FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions'';gbkey=CDS;gene=ftsE;product=cell division protein FtsE;protein_id=YP_405076.1;transl_table=11
NC_007606.1	RefSeq	gene	3351435	3352931	.	-	.	ID=gene3551;Dbxref=GeneID:3797860;Name=ftsY;Note=SDY3615;gbkey=Gene;gene=ftsY;gene_biotype=protein_coding;locus_tag=SDY_3615
NC_007606.1	RefSeq	CDS	3351435	3352931	.	-	0	ID=cds3153;Parent=gene3551;Dbxref=Genbank:YP_405077.1,GeneID:3797860;Name=YP_405077.1;Note=signal recognition protein receptor%3B functions in the targeting and insertion of membrane proteins;gbkey=CDS;gene=ftsY;product=cell division protein FtsY;protein_id=YP_405077.1;transl_table=11
NC_007606.1	RefSeq	gene	3353081	3353677	.	+	.	ID=gene3552;Dbxref=GeneID:3797861;Name=rsmD;Note=SDY3616;gbkey=Gene;gene=rsmD;gene_biotype=protein_coding;locus_tag=SDY_3616
NC_007606.1	RefSeq	CDS	3353081	3353677	.	+	0	ID=cds3154;Parent=gene3552;Dbxref=Genbank:YP_405078.1,GeneID:3797861;Name=YP_405078.1;Note=catalyzes the methylation of 16S rRNA at position G966;gbkey=CDS;gene=rsmD;product=16S rRNA m(2)G966-methyltransferase;protein_id=YP_405078.1;transl_table=11
NC_007606.1	RefSeq	gene	3353667	3353936	.	+	.	ID=gene3553;Dbxref=GeneID:3797862;Name=yhhL;Note=SDY3617;gbkey=Gene;gene=yhhL;gene_biotype=protein_coding;locus_tag=SDY_3617
NC_007606.1	RefSeq	CDS	3353667	3353936	.	+	0	ID=cds3155;Parent=gene3553;Dbxref=Genbank:YP_405079.1,GeneID:3797862;Name=YP_405079.1;Note=Code: S%3B COG: COG3776;gbkey=CDS;gene=yhhL;product=hypothetical protein;protein_id=YP_405079.1;transl_table=11
NC_007606.1	RefSeq	gene	3353939	3354298	.	-	.	ID=gene3554;Dbxref=GeneID:3797863;Name=yhhM;Note=SDY3618;gbkey=Gene;gene=yhhM;gene_biotype=protein_coding;locus_tag=SDY_3618
NC_007606.1	RefSeq	CDS	3353939	3354298	.	-	0	ID=cds3156;Parent=gene3554;Dbxref=Genbank:YP_405080.1,GeneID:3797863;Name=YP_405080.1;gbkey=CDS;gene=yhhM;product=receptor;protein_id=YP_405080.1;transl_table=11
NC_007606.1	RefSeq	gene	3354439	3355065	.	+	.	ID=gene3555;Dbxref=GeneID:3797864;Name=yhhN;Note=SDY3619%3B contains in-frame stop codon%3B original product:  enzyme;gbkey=Gene;gene=yhhN;gene_biotype=pseudogene;locus_tag=SDY_3619;pseudo=true
NC_007606.1	RefSeq	gene	3355139	3357337	.	+	.	ID=gene3556;Dbxref=GeneID:3797865;Name=zntA;Note=SDY3620;gbkey=Gene;gene=zntA;gene_biotype=protein_coding;locus_tag=SDY_3620
NC_007606.1	RefSeq	CDS	3355139	3357337	.	+	0	ID=cds3157;Parent=gene3556;Dbxref=Genbank:YP_405081.1,GeneID:3797865;Name=YP_405081.1;Note=''P-type ATPase involved in the export of lead%2C cadmium%2C zinc and mercury'';gbkey=CDS;gene=zntA;product=zinc/cadmium/mercury/lead-transporting ATPase;protein_id=YP_405081.1;transl_table=11
NC_007606.1	RefSeq	gene	3357439	3357684	.	-	.	ID=gene3557;Dbxref=GeneID:3797866;Name=yhhP;Note=SDY3621;gbkey=Gene;gene=yhhP;gene_biotype=protein_coding;locus_tag=SDY_3621
NC_007606.1	RefSeq	CDS	3357439	3357684	.	-	0	ID=cds3158;Parent=gene3557;Dbxref=Genbank:YP_405082.1,GeneID:3797866;Name=YP_405082.1;Note=TusA%3B transfers sulfur to TusBCD complex%3B involved in thiouridation of U34 position of some tRNAs;gbkey=CDS;gene=yhhP;product=sulfur transfer protein SirA;protein_id=YP_405082.1;transl_table=11
NC_007606.1	RefSeq	gene	3357905	3358570	.	+	.	ID=gene3558;Dbxref=GeneID:3797867;Name=yhhQ;Note=SDY3622;gbkey=Gene;gene=yhhQ;gene_biotype=protein_coding;locus_tag=SDY_3622
NC_007606.1	RefSeq	CDS	3357905	3358570	.	+	0	ID=cds3159;Parent=gene3558;Dbxref=Genbank:YP_405083.1,GeneID:3797867;Name=YP_405083.1;Note=Code: S%3B COG: COG1738;gbkey=CDS;gene=yhhQ;product=hypothetical protein;protein_id=YP_405083.1;transl_table=11
NC_007606.1	RefSeq	gene	3358643	3359200	.	+	.	ID=gene3559;Dbxref=GeneID:3797868;Name=SDY_3623;Note=SDY3623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3623
NC_007606.1	RefSeq	CDS	3358643	3359200	.	+	0	ID=cds3160;Parent=gene3559;Dbxref=Genbank:YP_405084.2,GeneID:3797868;Name=YP_405084.2;gbkey=CDS;product=hypothetical protein;protein_id=YP_405084.2;transl_table=11
NC_007606.1	RefSeq	gene	3359204	3360422	.	-	.	ID=gene3560;Dbxref=GeneID:3797869;Name=yhhS;Note=SDY3624;gbkey=Gene;gene=yhhS;gene_biotype=pseudogene;locus_tag=SDY_3624;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	3360554	3361376	.	+	.	ID=gene3561;Dbxref=GeneID:3797870;Name=yhhT;Note='SDY3625%3B iso-IS1 insertion;gbkey=Gene;gene=yhhT;gene_biotype=pseudogene;locus_tag=SDY_3625;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	3361157	3361922	.	+	.	ID=id550;gbkey=mobile_element;gene=yhhT
NC_007606.1	RefSeq	gene	3361513	3361908	.	+	.	ID=gene3562;Dbxref=GeneID:3797871;Name=SDY_3626;Note=SDY3626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3626
NC_007606.1	RefSeq	CDS	3361513	3361908	.	+	0	ID=cds3161;Parent=gene3562;Dbxref=Genbank:YP_405086.1,GeneID:3797871;Name=YP_405086.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405086.1;transl_table=11
NC_007606.1	RefSeq	region	3362348	3363115	.	-	.	ID=id551;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3362363	3362740	.	-	.	ID=gene3563;Dbxref=GeneID:3797872;Name=insB;Note=SDY3627;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3627
NC_007606.1	RefSeq	CDS	3362363	3362740	.	-	0	ID=cds3162;Parent=gene3563;Dbxref=Genbank:YP_405087.1,GeneID:3797872;Name=YP_405087.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405087.1;transl_table=11
NC_007606.1	RefSeq	gene	3362785	3363060	.	-	.	ID=gene3564;Dbxref=GeneID:3797873;Name=insA;Note=SDY3628;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3628
NC_007606.1	RefSeq	CDS	3362785	3363060	.	-	0	ID=cds3163;Parent=gene3564;Dbxref=Genbank:YP_405088.1,GeneID:3797873;Name=YP_405088.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405088.1;transl_table=11
NC_007606.1	RefSeq	gene	3363131	3364360	.	+	.	ID=gene3565;Dbxref=GeneID:3797874;Name=SDY_3629;Note=SDY3629;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3629
NC_007606.1	RefSeq	CDS	3363131	3364360	.	+	0	ID=cds3164;Parent=gene3565;Dbxref=Genbank:YP_405089.1,GeneID:3797874;Name=YP_405089.1;Note=''FabB%3B beta-ketoacyl-ACP synthase I%2C KASI%3B catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP%3B required for the elongation of short-chain unsaturated acyl-ACP'';gbkey=CDS;product=3-oxoacyl-ACP synthase;protein_id=YP_405089.1;transl_table=11
NC_007606.1	RefSeq	gene	3364362	3364949	.	+	.	ID=gene3566;Dbxref=GeneID:3797875;Name=yhhU;Note=SDY3630;gbkey=Gene;gene=yhhU;gene_biotype=protein_coding;locus_tag=SDY_3630
NC_007606.1	RefSeq	CDS	3364362	3364949	.	+	0	ID=cds3165;Parent=gene3566;Dbxref=Genbank:YP_405090.1,GeneID:3797875;Name=YP_405090.1;Note=Code: H%3B COG: COG2091;gbkey=CDS;gene=yhhU;product=holo-(acyl carrier protein) synthase 2;protein_id=YP_405090.1;transl_table=11
NC_007606.1	RefSeq	gene	3365060	3366634	.	+	.	ID=gene3567;Dbxref=GeneID:3797876;Name=nikA;Note=SDY3631;gbkey=Gene;gene=nikA;gene_biotype=protein_coding;locus_tag=SDY_3631
NC_007606.1	RefSeq	CDS	3365060	3366634	.	+	0	ID=cds3166;Parent=gene3567;Dbxref=Genbank:YP_405091.1,GeneID:3797876;Name=YP_405091.1;Note=Code: E%3B COG: COG0747;gbkey=CDS;gene=nikA;product=nickel periplasmic binding protein;protein_id=YP_405091.1;transl_table=11
NC_007606.1	RefSeq	gene	3366634	3367578	.	+	.	ID=gene3568;Dbxref=GeneID:3797877;Name=nikB;Note=SDY3632;gbkey=Gene;gene=nikB;gene_biotype=protein_coding;locus_tag=SDY_3632
NC_007606.1	RefSeq	CDS	3366634	3367578	.	+	0	ID=cds3167;Parent=gene3568;Dbxref=Genbank:YP_405092.1,GeneID:3797877;Name=YP_405092.1;Note=with NikACDE is involved in nickel transport into the cell;gbkey=CDS;gene=nikB;product=nickel transporter permease NikB;protein_id=YP_405092.1;transl_table=11
NC_007606.1	RefSeq	gene	3367575	3368408	.	+	.	ID=gene3569;Dbxref=GeneID:3797878;Name=nikC;Note=SDY3633;gbkey=Gene;gene=nikC;gene_biotype=protein_coding;locus_tag=SDY_3633
NC_007606.1	RefSeq	CDS	3367575	3368408	.	+	0	ID=cds3168;Parent=gene3569;Dbxref=Genbank:YP_405093.1,GeneID:3797878;Name=YP_405093.1;Note=with NikABDE is involved in nickel transport into the cell;gbkey=CDS;gene=nikC;product=nickel transporter permease NikC;protein_id=YP_405093.1;transl_table=11
NC_007606.1	RefSeq	gene	3368408	3369172	.	+	.	ID=gene3570;Dbxref=GeneID:3797806;Name=nikD;Note=SDY3634;gbkey=Gene;gene=nikD;gene_biotype=protein_coding;locus_tag=SDY_3634
NC_007606.1	RefSeq	CDS	3368408	3369172	.	+	0	ID=cds3169;Parent=gene3570;Dbxref=Genbank:YP_405094.1,GeneID:3797806;Name=YP_405094.1;Note=with NikABCE is involved in nickel transport into the cell;gbkey=CDS;gene=nikD;product=nickel transporter ATP-binding protein NikD;protein_id=YP_405094.1;transl_table=11
NC_007606.1	RefSeq	gene	3369169	3369975	.	+	.	ID=gene3571;Dbxref=GeneID:3797807;Name=nikE;Note=SDY3635;gbkey=Gene;gene=nikE;gene_biotype=protein_coding;locus_tag=SDY_3635
NC_007606.1	RefSeq	CDS	3369169	3369975	.	+	0	ID=cds3170;Parent=gene3571;Dbxref=Genbank:YP_405095.1,GeneID:3797807;Name=YP_405095.1;Note=with NikABCD is involved with nickel transport into the cell;gbkey=CDS;gene=nikE;product=nickel transporter ATP-binding protein NikE;protein_id=YP_405095.1;transl_table=11
NC_007606.1	RefSeq	gene	3369981	3370382	.	+	.	ID=gene3572;Dbxref=GeneID:3797808;Name=yhhG;Note=SDY3636;gbkey=Gene;gene=yhhG;gene_biotype=protein_coding;locus_tag=SDY_3636
NC_007606.1	RefSeq	CDS	3369981	3370382	.	+	0	ID=cds3171;Parent=gene3572;Dbxref=Genbank:YP_405096.1,GeneID:3797808;Name=YP_405096.1;Note=Inhibits transcription at high concentrations of nickel;gbkey=CDS;gene=yhhG;product=nickel responsive regulator;protein_id=YP_405096.1;transl_table=11
NC_007606.1	RefSeq	region	3370815	3371580	.	+	.	ID=id552;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3370872	3371144	.	+	.	ID=gene3573;Dbxref=GeneID:18263147;Name=SDY_4761;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4761
NC_007606.1	RefSeq	CDS	3370872	3371144	.	+	0	ID=cds3172;Parent=gene3573;Dbxref=Genbank:YP_009000833.1,GeneID:18263147;Name=YP_009000833.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000833.1;transl_table=11
NC_007606.1	RefSeq	region	3372008	3372773	.	-	.	ID=id553;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3372022	3372417	.	-	.	ID=gene3574;Dbxref=GeneID:3797811;Name=SDY_3639;Note=SDY3639;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3639
NC_007606.1	RefSeq	CDS	3372022	3372417	.	-	0	ID=cds3173;Parent=gene3574;Dbxref=Genbank:YP_405098.2,GeneID:3797811;Name=YP_405098.2;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405098.2;transl_table=11
NC_007606.1	RefSeq	gene	3372444	3372716	.	-	.	ID=gene3575;Dbxref=GeneID:18263148;Name=SDY_4762;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4762
NC_007606.1	RefSeq	CDS	3372444	3372716	.	-	0	ID=cds3174;Parent=gene3575;Dbxref=Genbank:YP_009000834.1,GeneID:18263148;Name=YP_009000834.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000834.1;transl_table=11
NC_007606.1	RefSeq	gene	3372900	3373373	.	+	.	ID=gene3576;Dbxref=GeneID:3797813;Name=SDY_3641;Note=SDY3641;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3641
NC_007606.1	RefSeq	CDS	3372900	3373373	.	+	0	ID=cds3175;Parent=gene3576;Dbxref=Genbank:YP_405100.1,GeneID:3797813;Name=YP_405100.1;Note=Code: GT%3B COG: COG1762;gbkey=CDS;product=PTS system transporter subunit IIA;protein_id=YP_405100.1;transl_table=11
NC_007606.1	RefSeq	gene	3373370	3373651	.	+	.	ID=gene3577;Dbxref=GeneID:3797814;Name=SDY_3642;Note=SDY3642;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3642
NC_007606.1	RefSeq	CDS	3373370	3373651	.	+	0	ID=cds3176;Parent=gene3577;Dbxref=Genbank:YP_405101.1,GeneID:3797814;Name=YP_405101.1;Note=Code: G%3B COG: COG3414;gbkey=CDS;product=PTS system transporter subunit IIB;protein_id=YP_405101.1;transl_table=11
NC_007606.1	RefSeq	gene	3373728	3374111	.	+	.	ID=gene3578;Dbxref=GeneID:3797815;Name=SDY_3643;Note=SDY3643;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3643
NC_007606.1	RefSeq	CDS	3373728	3374111	.	+	0	ID=cds3177;Parent=gene3578;Dbxref=Genbank:YP_405102.1,GeneID:3797815;Name=YP_405102.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405102.1;transl_table=11
NC_007606.1	RefSeq	region	3374165	3374932	.	+	.	ID=id554;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3374220	3374495	.	+	.	ID=gene3579;Dbxref=GeneID:3797816;Name=insA;Note=SDY3644;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3644
NC_007606.1	RefSeq	CDS	3374220	3374495	.	+	0	ID=cds3178;Parent=gene3579;Dbxref=Genbank:YP_405103.1,GeneID:3797816;Name=YP_405103.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405103.1;transl_table=11
NC_007606.1	RefSeq	gene	3374540	3374917	.	+	.	ID=gene3580;Dbxref=GeneID:3797817;Name=insB;Note=SDY3645;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3645
NC_007606.1	RefSeq	CDS	3374540	3374917	.	+	0	ID=cds3179;Parent=gene3580;Dbxref=Genbank:YP_405104.1,GeneID:3797817;Name=YP_405104.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405104.1;transl_table=11
NC_007606.1	RefSeq	gene	3374999	3375532	.	+	.	ID=gene3581;Dbxref=GeneID:3797818;Name=SDY_3646;Note=SDY3646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3646
NC_007606.1	RefSeq	CDS	3374999	3375532	.	+	0	ID=cds3180;Parent=gene3581;Dbxref=Genbank:YP_405105.1,GeneID:3797818;Name=YP_405105.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405105.1;transl_table=11
NC_007606.1	RefSeq	gene	3375535	3376309	.	+	.	ID=gene3582;Dbxref=GeneID:3797819;Name=SDY_3647;Note=SDY3647;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3647;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	3376312	3376925	.	+	.	ID=gene3583;Dbxref=GeneID:3797820;Name=SDY_3648;Note=SDY3648;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3648;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	3377119	3378624	.	-	.	ID=gene3584;Dbxref=GeneID:3797821;Name=glpD;Note=SDY3649;gbkey=Gene;gene=glpD;gene_biotype=protein_coding;locus_tag=SDY_3649
NC_007606.1	RefSeq	CDS	3377119	3378624	.	-	0	ID=cds3181;Parent=gene3584;Dbxref=Genbank:YP_405108.1,GeneID:3797821;Name=YP_405108.1;Note=in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions%3B anaerobic expression is repressed by the arcAB system%3B converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8%3B associates with the cytoplasmic membrane;gbkey=CDS;gene=glpD;product=glycerol-3-phosphate dehydrogenase;protein_id=YP_405108.1;transl_table=11
NC_007606.1	RefSeq	gene	3378814	3379140	.	+	.	ID=gene3585;Dbxref=GeneID:3797822;Name=glpE;Note=SDY3650;gbkey=Gene;gene=glpE;gene_biotype=protein_coding;locus_tag=SDY_3650
NC_007606.1	RefSeq	CDS	3378814	3379140	.	+	0	ID=cds3182;Parent=gene3585;Dbxref=Genbank:YP_405109.1,GeneID:3797822;Name=YP_405109.1;Note=belongs to rhodanese family%3B thiosulfate thiotransferase%3B in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency%3B contains an active site cysteine;gbkey=CDS;gene=glpE;product=thiosulfate sulfurtransferase;protein_id=YP_405109.1;transl_table=11
NC_007606.1	RefSeq	gene	3379185	3380015	.	+	.	ID=gene3586;Dbxref=GeneID:3797823;Name=glpG;Note=SDY3651;gbkey=Gene;gene=glpG;gene_biotype=protein_coding;locus_tag=SDY_3651
NC_007606.1	RefSeq	CDS	3379185	3380015	.	+	0	ID=cds3183;Parent=gene3586;Dbxref=Genbank:YP_405110.1,GeneID:3797823;Name=YP_405110.1;Note=protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity;gbkey=CDS;gene=glpG;product=intramembrane serine protease GlpG;protein_id=YP_405110.1;transl_table=11
NC_007606.1	RefSeq	gene	3380032	3380790	.	+	.	ID=gene3587;Dbxref=GeneID:3797824;Name=glpR;Note=SDY3652;gbkey=Gene;gene=glpR;gene_biotype=protein_coding;locus_tag=SDY_3652
NC_007606.1	RefSeq	CDS	3380032	3380790	.	+	0	ID=cds3184;Parent=gene3587;Dbxref=Genbank:YP_405111.1,GeneID:3797824;Name=YP_405111.1;Note=''represses the glpD%2C glpFK%2C glpTQ%2C and glpACB operons involved in glycerol-3-phosphate metabolism'';gbkey=CDS;gene=glpR;product=DNA-binding transcriptional repressor GlpR;protein_id=YP_405111.1;transl_table=11
NC_007606.1	RefSeq	gene	3380772	3381245	.	-	.	ID=gene3588;Dbxref=GeneID:3796709;Name=rtcR;Note=SDY3654%3B truncated%3B original product:  2-component regulator;gbkey=Gene;gene=rtcR;gene_biotype=pseudogene;locus_tag=SDY_3654;pseudo=true
NC_007606.1	RefSeq	gene	3381227	3381781	.	+	.	ID=gene3589;Dbxref=GeneID:3797825;Name=rtcB;Note=''SDY3653%3B truncated%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=rtcB;gene_biotype=pseudogene;locus_tag=SDY_3653;pseudo=true
NC_007606.1	RefSeq	gene	3381782	3382813	.	+	.	ID=gene3590;Dbxref=GeneID:3796710;Name=yhgKJ;Note=SDY3655;gbkey=Gene;gene=yhgKJ;gene_biotype=protein_coding;locus_tag=SDY_3655
NC_007606.1	RefSeq	CDS	3381782	3382813	.	+	0	ID=cds3185;Parent=gene3590;Dbxref=Genbank:YP_405112.1,GeneID:3796710;Name=YP_405112.1;Note=''catalyzes the conversion of terminal3'-phosphate of RNA to the 2'%2C3'-cyclicphosphodiester'';gbkey=CDS;gene=yhgKJ;product=RNA 3'-terminal-phosphate cyclase;protein_id=YP_405112.1;transl_table=11
NC_007606.1	RefSeq	gene	3382863	3383348	.	-	.	ID=gene3591;Dbxref=GeneID:3796711;Name=SDY_3656;Note=SDY3656;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3656
NC_007606.1	RefSeq	CDS	3382863	3383348	.	-	0	ID=cds3186;Parent=gene3591;Dbxref=Genbank:YP_405113.1,GeneID:3796711;Name=YP_405113.1;Note=Code: KR%3B COG: COG0454;gbkey=CDS;product=hypothetical protein;protein_id=YP_405113.1;transl_table=11
NC_007606.1	RefSeq	gene	3383339	3383623	.	-	.	ID=gene3592;Dbxref=GeneID:3796712;Name=SDY_3657;Note=SDY3657;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3657
NC_007606.1	RefSeq	CDS	3383339	3383623	.	-	0	ID=cds3187;Parent=gene3592;Dbxref=Genbank:YP_405114.1,GeneID:3796712;Name=YP_405114.1;Note=Code: S%3B COG: COG4453;gbkey=CDS;product=hypothetical protein;protein_id=YP_405114.1;transl_table=11
NC_007606.1	RefSeq	gene	3383684	3386383	.	-	.	ID=gene3593;Dbxref=GeneID:3796713;Name=malT;Note=SDY3658;gbkey=Gene;gene=malT;gene_biotype=protein_coding;locus_tag=SDY_3658
NC_007606.1	RefSeq	CDS	3383684	3386383	.	-	0	ID=cds3188;Parent=gene3593;Dbxref=Genbank:YP_405115.1,GeneID:3796713;Name=YP_405115.1;Note=Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides;gbkey=CDS;gene=malT;product=transcriptional regulator MalT;protein_id=YP_405115.1;transl_table=11
NC_007606.1	RefSeq	gene	3386995	3389388	.	+	.	ID=gene3594;Dbxref=GeneID:3796714;Name=malP;Note=SDY3659;gbkey=Gene;gene=malP;gene_biotype=protein_coding;locus_tag=SDY_3659
NC_007606.1	RefSeq	CDS	3386995	3389388	.	+	0	ID=cds3189;Parent=gene3594;Dbxref=Genbank:YP_405116.1,GeneID:3796714;Name=YP_405116.1;Note=Code: G%3B COG: COG0058;gbkey=CDS;gene=malP;product=maltodextrin phosphorylase;protein_id=YP_405116.1;transl_table=11
NC_007606.1	RefSeq	gene	3389398	3391482	.	+	.	ID=gene3595;Dbxref=GeneID:3796715;Name=malQ;Note=SDY3660;gbkey=Gene;gene=malQ;gene_biotype=protein_coding;locus_tag=SDY_3660
NC_007606.1	RefSeq	CDS	3389398	3391482	.	+	0	ID=cds3190;Parent=gene3595;Dbxref=Genbank:YP_405117.1,GeneID:3796715;Name=YP_405117.1;Note=amylomaltase%3B acts to release glucose from maltodextrins;gbkey=CDS;gene=malQ;product=4-alpha-glucanotransferase;protein_id=YP_405117.1;transl_table=11
NC_007606.1	RefSeq	gene	3391527	3392843	.	-	.	ID=gene3596;Dbxref=GeneID:3796716;Name=gntT;Note=SDY3661;gbkey=Gene;gene=gntT;gene_biotype=protein_coding;locus_tag=SDY_3661
NC_007606.1	RefSeq	CDS	3391527	3392843	.	-	0	ID=cds3191;Parent=gene3596;Dbxref=Genbank:YP_405118.1,GeneID:3796716;Name=YP_405118.1;Note=Code: GE%3B COG: COG2610;gbkey=CDS;gene=gntT;product=high-affinity gluconate/gluconate transporter permease;protein_id=YP_405118.1;transl_table=11
NC_007606.1	RefSeq	gene	3393204	3393779	.	-	.	ID=gene3597;Dbxref=GeneID:3796717;Name=yhgI;Note=SDY3662;gbkey=Gene;gene=yhgI;gene_biotype=protein_coding;locus_tag=SDY_3662
NC_007606.1	RefSeq	CDS	3393204	3393779	.	-	0	ID=cds3192;Parent=gene3597;Dbxref=Genbank:YP_405119.1,GeneID:3796717;Name=YP_405119.1;Note=cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source;gbkey=CDS;gene=yhgI;product=DNA uptake protein;protein_id=YP_405119.1;transl_table=11
NC_007606.1	RefSeq	gene	3393838	3394555	.	-	.	ID=gene3598;Dbxref=GeneID:3796719;Name=yhgH;Note=''SDY3664%3B frameshift%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yhgH;gene_biotype=pseudogene;locus_tag=SDY_3664;pseudo=true
NC_007606.1	RefSeq	gene	3394545	3395315	.	+	.	ID=gene3599;Dbxref=GeneID:3796718;Name=bioH;Note=SDY3663;gbkey=Gene;gene=bioH;gene_biotype=protein_coding;locus_tag=SDY_3663
NC_007606.1	RefSeq	CDS	3394545	3395315	.	+	0	ID=cds3193;Parent=gene3599;Dbxref=Genbank:YP_405120.1,GeneID:3796718;Name=YP_405120.1;Note=Shows carboxylesterase activity with a preference for short chain fatty acid esters%3B involved in pimeloyl-CoA synthesis;gbkey=CDS;gene=bioH;product=carboxylesterase BioH;protein_id=YP_405120.1;transl_table=11
NC_007606.1	RefSeq	gene	3395342	3396220	.	-	.	ID=gene3600;Dbxref=GeneID:3796720;Name=yhgA;Note=SDY3665;gbkey=Gene;gene=yhgA;gene_biotype=protein_coding;locus_tag=SDY_3665
NC_007606.1	RefSeq	CDS	3395342	3396220	.	-	0	ID=cds3194;Parent=gene3600;Dbxref=Genbank:YP_405121.1,GeneID:3796720;Name=YP_405121.1;Note=Code: S%3B COG: COG5464;gbkey=CDS;gene=yhgA;product=hypothetical protein;protein_id=YP_405121.1;transl_table=11
NC_007606.1	RefSeq	gene	3396423	3396659	.	-	.	ID=gene3601;Dbxref=GeneID:3796721;Name=yhgG;Note=SDY3666;gbkey=Gene;gene=yhgG;gene_biotype=protein_coding;locus_tag=SDY_3666
NC_007606.1	RefSeq	CDS	3396423	3396659	.	-	0	ID=cds3195;Parent=gene3601;Dbxref=Genbank:YP_405122.1,GeneID:3796721;Name=YP_405122.1;gbkey=CDS;gene=yhgG;product=hypothetical protein;protein_id=YP_405122.1;transl_table=11
NC_007606.1	RefSeq	gene	3396659	3398980	.	-	.	ID=gene3602;Dbxref=GeneID:3796722;Name=feoB;Note=SDY3667;gbkey=Gene;gene=feoB;gene_biotype=protein_coding;locus_tag=SDY_3667
NC_007606.1	RefSeq	CDS	3396659	3398980	.	-	0	ID=cds3196;Parent=gene3602;Dbxref=Genbank:YP_405123.1,GeneID:3796722;Name=YP_405123.1;Note=cytoplasmic membrane ferrous uptake system permease%3B mutations disrupt the ability of Escherichia coli to take up ferrous iron%3B GTP-binding protein which requires GTP for efficient iron(II) uptake;gbkey=CDS;gene=feoB;product=ferrous iron transport protein B;protein_id=YP_405123.1;transl_table=11
NC_007606.1	RefSeq	gene	3398997	3399224	.	-	.	ID=gene3603;Dbxref=GeneID:3796723;Name=feoA;Note=SDY3668;gbkey=Gene;gene=feoA;gene_biotype=protein_coding;locus_tag=SDY_3668
NC_007606.1	RefSeq	CDS	3398997	3399224	.	-	0	ID=cds3197;Parent=gene3603;Dbxref=Genbank:YP_405124.1,GeneID:3796723;Name=YP_405124.1;Note=Code: P%3B COG: COG1918;gbkey=CDS;gene=feoA;product=ferrous iron transport protein A;protein_id=YP_405124.1;transl_table=11
NC_007606.1	RefSeq	gene	3399681	3401903	.	-	.	ID=gene3604;Dbxref=GeneID:3796724;Name=yhgF;Note=SDY3669;gbkey=Gene;gene=yhgF;gene_biotype=protein_coding;locus_tag=SDY_3669
NC_007606.1	RefSeq	CDS	3399681	3401903	.	-	0	ID=cds3198;Parent=gene3604;Dbxref=Genbank:YP_405125.1,GeneID:3796724;Name=YP_405125.1;Note=Code: K%3B COG: COG2183;gbkey=CDS;gene=yhgF;product=hypothetical protein;protein_id=YP_405125.1;transl_table=11
NC_007606.1	RefSeq	gene	3402099	3402575	.	-	.	ID=gene3605;Dbxref=GeneID:3796725;Name=greB;Note=SDY3670;gbkey=Gene;gene=greB;gene_biotype=protein_coding;locus_tag=SDY_3670
NC_007606.1	RefSeq	CDS	3402099	3402575	.	-	0	ID=cds3199;Parent=gene3605;Dbxref=Genbank:YP_405126.1,GeneID:3796725;Name=YP_405126.1;Note=''necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites%3B arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through%2C resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus'';gbkey=CDS;gene=greB;product=transcription elongation factor GreB;protein_id=YP_405126.1;transl_table=11
NC_007606.1	RefSeq	gene	3402803	3403522	.	+	.	ID=gene3606;Dbxref=GeneID:3796726;Name=ompR;Note=SDY3671;gbkey=Gene;gene=ompR;gene_biotype=protein_coding;locus_tag=SDY_3671
NC_007606.1	RefSeq	CDS	3402803	3403522	.	+	0	ID=cds3200;Parent=gene3606;Dbxref=Genbank:YP_405127.1,GeneID:3796726;Name=YP_405127.1;Note=part of two-component system EnvZ/OmpR%3B regulates transcription of outer membrane porin genes ompC/F%3B under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR%3B the result is increased expression of ompC and repression of ompF%3B also functions in regulation of other genes%3B forms dimers upon phosphorylation;gbkey=CDS;gene=ompR;product=osmolarity response regulator;protein_id=YP_405127.1;transl_table=11
NC_007606.1	RefSeq	gene	3403519	3404871	.	+	.	ID=gene3607;Dbxref=GeneID:3796727;Name=envZ;Note=SDY3672;gbkey=Gene;gene=envZ;gene_biotype=protein_coding;gene_synonym=ompB;locus_tag=SDY_3672
NC_007606.1	RefSeq	CDS	3403519	3404871	.	+	0	ID=cds3201;Parent=gene3607;Dbxref=Genbank:YP_405128.1,GeneID:3796727;Name=YP_405128.1;Note=membrane-localized osmosensor%3B histidine kinase%3B in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR;gbkey=CDS;gene=envZ;product=osmolarity sensor protein;protein_id=YP_405128.1;transl_table=11
NC_007606.1	RefSeq	gene	3404947	3406569	.	-	.	ID=gene3608;Dbxref=GeneID:3797748;Name=pckA;Note=SDY3673;gbkey=Gene;gene=pckA;gene_biotype=protein_coding;locus_tag=SDY_3673
NC_007606.1	RefSeq	CDS	3404947	3406569	.	-	0	ID=cds3202;Parent=gene3608;Dbxref=Genbank:YP_405129.1,GeneID:3797748;Name=YP_405129.1;Note=PEP carboxykinase%3B PEP carboxylase%3B PEPCK%3B catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP;gbkey=CDS;gene=pckA;product=phosphoenolpyruvate carboxykinase;protein_id=YP_405129.1;transl_table=11
NC_007606.1	RefSeq	gene	3406949	3408673	.	+	.	ID=gene3609;Dbxref=GeneID:3797749;Name=yhgE;Note=SDY3674;gbkey=Gene;gene=yhgE;gene_biotype=protein_coding;locus_tag=SDY_3674
NC_007606.1	RefSeq	CDS	3406949	3408673	.	+	0	ID=cds3203;Parent=gene3609;Dbxref=Genbank:YP_405130.1,GeneID:3797749;Name=YP_405130.1;gbkey=CDS;gene=yhgE;product=transporter;protein_id=YP_405130.1;transl_table=11
NC_007606.1	RefSeq	region	3408727	3409495	.	-	.	ID=id555;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3409164	3409436	.	-	.	ID=gene3610;Dbxref=GeneID:18263149;Name=SDY_4763;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4763
NC_007606.1	RefSeq	CDS	3409164	3409436	.	-	0	ID=cds3204;Parent=gene3610;Dbxref=Genbank:YP_009000835.1,GeneID:18263149;Name=YP_009000835.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000835.1;transl_table=11
NC_007606.1	RefSeq	gene	3409509	3410387	.	-	.	ID=gene3611;Dbxref=GeneID:3797752;Name=hslO;Note=SDY3677;gbkey=Gene;gene=hslO;gene_biotype=protein_coding;locus_tag=SDY_3677
NC_007606.1	RefSeq	CDS	3409509	3410387	.	-	0	ID=cds3205;Parent=gene3611;Dbxref=Genbank:YP_405133.2,GeneID:3797752;Name=YP_405133.2;Note=''becomes active under oxidative stress%3B four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive%3B oxidative stress results in oxidized cysteines%2C release of zinc%2C and binding of Hsp33 to aggregation-prone proteins%3B forms dimers and higher order oligomers'';gbkey=CDS;gene=hslO;product=heat shock protein 33;protein_id=YP_405133.2;transl_table=11
NC_007606.1	RefSeq	gene	3410412	3410813	.	-	.	ID=gene3612;Dbxref=GeneID:3797753;Name=yrfH;Note=SDY3678;gbkey=Gene;gene=yrfH;gene_biotype=protein_coding;locus_tag=SDY_3678
NC_007606.1	RefSeq	CDS	3410412	3410813	.	-	0	ID=cds3206;Parent=gene3612;Dbxref=Genbank:YP_405134.1,GeneID:3797753;Name=YP_405134.1;Note=Code: J%3B COG: COG1188;gbkey=CDS;gene=yrfH;product=ribosome-associated heat shock protein Hsp15;protein_id=YP_405134.1;transl_table=11
NC_007606.1	RefSeq	gene	3410824	3411537	.	-	.	ID=gene3613;Dbxref=GeneID:3797754;Name=yrfG;Note=SDY3679;gbkey=Gene;gene=yrfG;gene_biotype=protein_coding;locus_tag=SDY_3679
NC_007606.1	RefSeq	CDS	3410824	3411537	.	-	0	ID=cds3207;Parent=gene3613;Dbxref=Genbank:YP_405135.1,GeneID:3797754;Name=YP_405135.1;Note=Code: R%3B COG: COG1011;gbkey=CDS;gene=yrfG;product=phosphatase;protein_id=YP_405135.1;transl_table=11
NC_007606.1	RefSeq	gene	3411557	3413692	.	-	.	ID=gene3614;Dbxref=GeneID:3797755;Name=yrfF;Note=SDY3680;gbkey=Gene;gene=yrfF;gene_biotype=protein_coding;locus_tag=SDY_3680
NC_007606.1	RefSeq	CDS	3411557	3413692	.	-	0	ID=cds3208;Parent=gene3614;Dbxref=Genbank:YP_405136.1,GeneID:3797755;Name=YP_405136.1;gbkey=CDS;gene=yrfF;product=dehydrogenase;protein_id=YP_405136.1;transl_table=11
NC_007606.1	RefSeq	gene	3414012	3414572	.	+	.	ID=gene3615;Dbxref=GeneID:3797756;Name=nudE;Note=SDY3681;gbkey=Gene;gene=nudE;gene_biotype=protein_coding;locus_tag=SDY_3681
NC_007606.1	RefSeq	CDS	3414012	3414572	.	+	0	ID=cds3209;Parent=gene3615;Dbxref=Genbank:YP_405137.1,GeneID:3797756;Name=YP_405137.1;Note=ADP-sugar pyrophosphatase%3B catalyzes the formation of D-ribose 5-phosphate from ADP-ribose%3B can also act on ADP-mannose and ADP-glucose;gbkey=CDS;gene=nudE;product=ADP-ribose diphosphatase NudE;protein_id=YP_405137.1;transl_table=11
NC_007606.1	RefSeq	gene	3414737	3417289	.	-	.	ID=gene3616;Dbxref=GeneID:3797757;Name=mrcA;Note=SDY3682;gbkey=Gene;gene=mrcA;gene_biotype=protein_coding;locus_tag=SDY_3682
NC_007606.1	RefSeq	CDS	3414737	3417289	.	-	0	ID=cds3210;Parent=gene3616;Dbxref=Genbank:YP_405138.2,GeneID:3797757;Name=YP_405138.2;Note=bifunctional murein transglycosylase/murein transpeptidase%3B penicillin-binding protein 1A%3B involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation%3B penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits;gbkey=CDS;gene=mrcA;product=peptidoglycan synthetase;protein_id=YP_405138.2;transl_table=11
NC_007606.1	RefSeq	gene	3417409	3418188	.	+	.	ID=gene3617;Dbxref=GeneID:3797758;Name=SDY_3683;Note=SDY3683;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3683;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	3418188	3418727	.	+	.	ID=gene3618;Dbxref=GeneID:3797760;Name=yrfC;Note=SDY3685;gbkey=Gene;gene=yrfC;gene_biotype=protein_coding;locus_tag=SDY_3685;pseudogene=unknown
NC_007606.1	RefSeq	CDS	3418188	3418727	.	+	0	ID=cds3211;Parent=gene3618;Dbxref=Genbank:YP_405141.1,GeneID:3797760;Name=YP_405141.1;Note=Code: NU%3B COG: COG3166;gbkey=CDS;gene=yrfC;product=hypothetical protein;protein_id=YP_405141.1;transl_table=11
NC_007606.1	RefSeq	gene	3418711	3419091	.	+	.	ID=gene3619;Dbxref=GeneID:3797761;Name=yrfB;Note=SDY3686;gbkey=Gene;gene=yrfB;gene_biotype=protein_coding;locus_tag=SDY_3686
NC_007606.1	RefSeq	CDS	3418711	3419091	.	+	0	ID=cds3212;Parent=gene3619;Dbxref=Genbank:YP_405142.1,GeneID:3797761;Name=YP_405142.1;gbkey=CDS;gene=yrfB;product=hypothetical protein;protein_id=YP_405142.1;transl_table=11
NC_007606.1	RefSeq	gene	3419101	3419544	.	+	.	ID=gene3620;Dbxref=GeneID:3797762;Name=yrfA;Note=SDY3687;gbkey=Gene;gene=yrfA;gene_biotype=protein_coding;locus_tag=SDY_3687
NC_007606.1	RefSeq	CDS	3419101	3419544	.	+	0	ID=cds3213;Parent=gene3620;Dbxref=Genbank:YP_405143.1,GeneID:3797762;Name=YP_405143.1;gbkey=CDS;gene=yrfA;product=hypothetical protein;protein_id=YP_405143.1;transl_table=11
NC_007606.1	RefSeq	gene	3419456	3420694	.	+	.	ID=gene3621;Dbxref=GeneID:3797763;Name=hofQ;Note=SDY3688%3B contains in-frame stop codon%3B original product:  transport portein;gbkey=Gene;gene=hofQ;gene_biotype=pseudogene;locus_tag=SDY_3688;pseudo=true
NC_007606.1	RefSeq	gene	3421095	3421616	.	+	.	ID=gene3622;Dbxref=GeneID:3797764;Name=aroK;Note=SDY3689;gbkey=Gene;gene=aroK;gene_biotype=protein_coding;locus_tag=SDY_3689
NC_007606.1	RefSeq	CDS	3421095	3421616	.	+	0	ID=cds3214;Parent=gene3622;Dbxref=Genbank:YP_405144.1,GeneID:3797764;Name=YP_405144.1;Note=type I enzyme similar to type II but differentially regulated%3B major shikimate kinase in fully repressed cells%3B catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroK;product=shikimate kinase I;protein_id=YP_405144.1;transl_table=11
NC_007606.1	RefSeq	gene	3421673	3422761	.	+	.	ID=gene3623;Dbxref=GeneID:3797765;Name=aroB;Note=SDY3690;gbkey=Gene;gene=aroB;gene_biotype=protein_coding;locus_tag=SDY_3690
NC_007606.1	RefSeq	CDS	3421673	3422761	.	+	0	ID=cds3215;Parent=gene3623;Dbxref=Genbank:YP_405145.1,GeneID:3797765;Name=YP_405145.1;Note=catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate%3B functions in aromatic amino acid biosynthesis;gbkey=CDS;gene=aroB;product=3-dehydroquinate synthase;protein_id=YP_405145.1;transl_table=11
NC_007606.1	RefSeq	gene	3422853	3424130	.	+	.	ID=gene3624;Dbxref=GeneID:3797766;Name=damX;Note=SDY3691;gbkey=Gene;gene=damX;gene_biotype=protein_coding;locus_tag=SDY_3691
NC_007606.1	RefSeq	CDS	3422853	3424130	.	+	0	ID=cds3216;Parent=gene3624;Dbxref=Genbank:YP_405146.1,GeneID:3797766;Name=YP_405146.1;Note=Code: S%3B COG: COG3266;gbkey=CDS;gene=damX;product=hypothetical protein;protein_id=YP_405146.1;transl_table=11
NC_007606.1	RefSeq	gene	3424237	3425073	.	+	.	ID=gene3625;Dbxref=GeneID:3797767;Name=dam;Note=SDY3692;gbkey=Gene;gene=dam;gene_biotype=protein_coding;locus_tag=SDY_3692
NC_007606.1	RefSeq	CDS	3424237	3425073	.	+	0	ID=cds3217;Parent=gene3625;Dbxref=REBASE:M.SdySDamP,Genbank:YP_405147.1,GeneID:3797767;Name=YP_405147.1;Note=Code: L%3B COG: COG0338;gbkey=CDS;gene=dam;product=DNA adenine methylase;protein_id=YP_405147.1;transl_table=11
NC_007606.1	RefSeq	gene	3425091	3425768	.	+	.	ID=gene3626;Dbxref=GeneID:3798138;Name=rpe;Note=SDY3693;gbkey=Gene;gene=rpe;gene_biotype=protein_coding;locus_tag=SDY_3693
NC_007606.1	RefSeq	CDS	3425091	3425768	.	+	0	ID=cds3218;Parent=gene3626;Dbxref=Genbank:YP_405148.1,GeneID:3798138;Name=YP_405148.1;Note=catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate;gbkey=CDS;gene=rpe;product=ribulose-phosphate 3-epimerase;protein_id=YP_405148.1;transl_table=11
NC_007606.1	RefSeq	gene	3425761	3426519	.	+	.	ID=gene3627;Dbxref=GeneID:3798139;Name=gph;Note=SDY3694;gbkey=Gene;gene=gph;gene_biotype=protein_coding;locus_tag=SDY_3694
NC_007606.1	RefSeq	CDS	3425761	3426519	.	+	0	ID=cds3219;Parent=gene3627;Dbxref=Genbank:YP_405149.1,GeneID:3798139;Name=YP_405149.1;Note=catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate;gbkey=CDS;gene=gph;product=phosphoglycolate phosphatase;protein_id=YP_405149.1;transl_table=11
NC_007606.1	RefSeq	gene	3426512	3427516	.	+	.	ID=gene3628;Dbxref=GeneID:3798140;Name=trpS;Note=SDY3695;gbkey=Gene;gene=trpS;gene_biotype=protein_coding;locus_tag=SDY_3695
NC_007606.1	RefSeq	CDS	3426512	3427516	.	+	0	ID=cds3220;Parent=gene3628;Dbxref=Genbank:YP_405150.1,GeneID:3798140;Name=YP_405150.1;Note=''catalyzes a two-step reaction%2C first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP%2C followed by transfer of the aminoacyl-adenylate to its tRNA'';gbkey=CDS;gene=trpS;product=tryptophanyl-tRNA synthetase;protein_id=YP_405150.1;transl_table=11
NC_007606.1	RefSeq	gene	3427784	3428689	.	+	.	ID=gene3629;Dbxref=GeneID:3798141;Name=yhfZ;Note=SDY3696;gbkey=Gene;gene=yhfZ;gene_biotype=protein_coding;locus_tag=SDY_3696
NC_007606.1	RefSeq	CDS	3427784	3428689	.	+	0	ID=cds3221;Parent=gene3629;Dbxref=Genbank:YP_405151.2,GeneID:3798141;Name=YP_405151.2;gbkey=CDS;gene=yhfZ;product=hypothetical protein;protein_id=YP_405151.2;transl_table=11
NC_007606.1	RefSeq	gene	3428664	3430404	.	+	.	ID=gene3630;Dbxref=GeneID:3798142;Name=yhfY;Note=''SDY3697%3B contains IS2 insertion%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yhfY;gene_biotype=pseudogene;locus_tag=SDY_3697;pseudo=true
NC_007606.1	RefSeq	region	3428756	3430086	.	+	.	ID=id556;Dbxref=GeneID:3798142;gbkey=mobile_element;gene=yhfY
NC_007606.1	RefSeq	gene	3428847	3429212	.	+	.	ID=gene3631;Dbxref=GeneID:3798143;Name=SDY_3698;Note=SDY3698;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3698
NC_007606.1	RefSeq	CDS	3428847	3429212	.	+	0	ID=cds3222;Parent=gene3631;Dbxref=Genbank:YP_405152.1,GeneID:3798143;Name=YP_405152.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_405152.1;transl_table=11
NC_007606.1	RefSeq	gene	3429170	3430075	.	+	.	ID=gene3632;Dbxref=GeneID:3798144;Name=SDY_3699;Note=SDY3699;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3699
NC_007606.1	RefSeq	CDS	3429170	3430075	.	+	0	ID=cds3223;Parent=gene3632;Dbxref=Genbank:YP_405153.2,GeneID:3798144;Name=YP_405153.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_405153.2;transl_table=11
NC_007606.1	RefSeq	gene	3430488	3431514	.	+	.	ID=gene3633;Dbxref=GeneID:3798145;Name=yhfX;Note=''SDY3700%3B frameshift%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yhfX;gene_biotype=pseudogene;locus_tag=SDY_3700;pseudo=true
NC_007606.1	RefSeq	gene	3431652	3432878	.	+	.	ID=gene3634;Dbxref=GeneID:3798146;Name=yhfW;Note=SDY3701;gbkey=Gene;gene=yhfW;gene_biotype=protein_coding;locus_tag=SDY_3701
NC_007606.1	RefSeq	CDS	3431652	3432878	.	+	0	ID=cds3224;Parent=gene3634;Dbxref=Genbank:YP_405154.1,GeneID:3798146;Name=YP_405154.1;Note=Code: G%3B COG: COG1015;gbkey=CDS;gene=yhfW;product=mutase;protein_id=YP_405154.1;transl_table=11
NC_007606.1	RefSeq	gene	3432875	3433753	.	+	.	ID=gene3635;Dbxref=GeneID:3798147;Name=yhfV;Note=SDY3702;gbkey=Gene;gene=yhfV;gene_biotype=protein_coding;locus_tag=SDY_3702
NC_007606.1	RefSeq	CDS	3432875	3433753	.	+	0	ID=cds3225;Parent=gene3635;Dbxref=Genbank:YP_405155.1,GeneID:3798147;Name=YP_405155.1;Note=phosphotriesterase homology protein%3B PhP%3B YhfV%3B member of a family of proteins related to phosphotriesterase (PTE);gbkey=CDS;gene=yhfV;product=hydrolase;protein_id=YP_405155.1;transl_table=11
NC_007606.1	RefSeq	gene	3433725	3434116	.	+	.	ID=gene3636;Dbxref=GeneID:3798148;Name=yhfU;Note=''SDY3703%3B frameshift%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yhfU;gene_biotype=pseudogene;locus_tag=SDY_3703;pseudo=true
NC_007606.1	RefSeq	region	3434291	3435056	.	-	.	ID=id557;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3434305	3434700	.	-	.	ID=gene3637;Dbxref=GeneID:3798149;Name=SDY_3704;Note=SDY3704;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3704
NC_007606.1	RefSeq	CDS	3434305	3434700	.	-	0	ID=cds3226;Parent=gene3637;Dbxref=Genbank:YP_405156.1,GeneID:3798149;Name=YP_405156.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405156.1;transl_table=11
NC_007606.1	RefSeq	gene	3434727	3434999	.	-	.	ID=gene3638;Dbxref=GeneID:18263150;Name=SDY_4764;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4764
NC_007606.1	RefSeq	CDS	3434727	3434999	.	-	0	ID=cds3227;Parent=gene3638;Dbxref=Genbank:YP_009000836.1,GeneID:18263150;Name=YP_009000836.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000836.1;transl_table=11
NC_007606.1	RefSeq	gene	3434922	3435623	.	+	.	ID=gene3639;Dbxref=GeneID:3798150;Name=SDY_3705;Note=SDY3705;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3705
NC_007606.1	RefSeq	CDS	3434922	3435623	.	+	0	ID=cds3228;Parent=gene3639;Dbxref=Genbank:YP_405157.1,GeneID:3798150;Name=YP_405157.1;Note=Code: K%3B COG: COG2207;gbkey=CDS;product=transcriptional regulator;protein_id=YP_405157.1;transl_table=11
NC_007606.1	RefSeq	gene	3435867	3436340	.	+	.	ID=gene3640;Dbxref=GeneID:3798151;Name=yiaI;Note=SDY3706;gbkey=Gene;gene=yiaI;gene_biotype=protein_coding;locus_tag=SDY_3706
NC_007606.1	RefSeq	CDS	3435867	3436340	.	+	0	ID=cds3229;Parent=gene3640;Dbxref=Genbank:YP_405158.1,GeneID:3798151;Name=YP_405158.1;Note=Code: C%3B COG: COG1142;gbkey=CDS;gene=yiaI;product=hypothetical protein;protein_id=YP_405158.1;transl_table=11
NC_007606.1	RefSeq	gene	3436379	3437632	.	-	.	ID=gene3641;Dbxref=GeneID:3798152;Name=avtA;Note=SDY3707;gbkey=Gene;gene=avtA;gene_biotype=protein_coding;locus_tag=SDY_3707
NC_007606.1	RefSeq	CDS	3436379	3437632	.	-	0	ID=cds3230;Parent=gene3641;Dbxref=Genbank:YP_405159.1,GeneID:3798152;Name=YP_405159.1;Note=''transaminase C%3B catalyzes transamination of alanine%2C valine%2C and 2-aminobutyrate with their respective 2-keto acids%3B also catalyzes terminal step in valine biosynthesis'';gbkey=CDS;gene=avtA;product=valine--pyruvate transaminase;protein_id=YP_405159.1;transl_table=11
NC_007606.1	RefSeq	gene	3437810	3439840	.	-	.	ID=gene3642;Dbxref=GeneID:3798153;Name=malS;Note=SDY3708%3B contains in-frame stop codon%3B original product: alpha-amylase;gbkey=Gene;gene=malS;gene_biotype=pseudogene;locus_tag=SDY_3708;pseudo=true
NC_007606.1	RefSeq	gene	3440160	3440984	.	+	.	ID=gene3643;Dbxref=GeneID:3798154;Name=bax;Note=SDY3709;gbkey=Gene;gene=bax;gene_biotype=protein_coding;locus_tag=SDY_3709
NC_007606.1	RefSeq	CDS	3440160	3440984	.	+	0	ID=cds3231;Parent=gene3643;Dbxref=Genbank:YP_405160.1,GeneID:3798154;Name=YP_405160.1;Note=Code: R%3B COG: COG2992;gbkey=CDS;gene=bax;product=hypothetical protein;protein_id=YP_405160.1;transl_table=11
NC_007606.1	RefSeq	gene	3441092	3442270	.	-	.	ID=gene3644;Dbxref=GeneID:3798155;Name=xylR;Note=SDY3710;gbkey=Gene;gene=xylR;gene_biotype=protein_coding;locus_tag=SDY_3710
NC_007606.1	RefSeq	CDS	3441092	3442270	.	-	0	ID=cds3232;Parent=gene3644;Dbxref=Genbank:YP_405161.1,GeneID:3798155;Name=YP_405161.1;Note=Code: K%3B COG: COG1609;gbkey=CDS;gene=xylR;product=xyl operon regulator;protein_id=YP_405161.1;transl_table=11
NC_007606.1	RefSeq	region	3442340	3443106	.	-	.	ID=id558;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3442777	3443049	.	-	.	ID=gene3645;Dbxref=GeneID:18263151;Name=SDY_4765;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4765
NC_007606.1	RefSeq	CDS	3442777	3443049	.	-	0	ID=cds3233;Parent=gene3645;Dbxref=Genbank:YP_009000837.1,GeneID:18263151;Name=YP_009000837.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000837.1;transl_table=11
NC_007606.1	RefSeq	region	3443107	3443328	.	-	.	ID=id559;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	3443328	3444753	.	+	.	ID=id560;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3443413	3444739	.	+	.	ID=gene3646;Dbxref=GeneID:3797204;Name=SDY_3714;Note=SDY3714;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3714;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	3444784	3444902	.	-	.	ID=gene3647;Dbxref=GeneID:3797206;Name=rrfC;Note=SDY3716;gbkey=Gene;gene=rrfC;gene_biotype=rRNA;locus_tag=SDY_3716
NC_007606.1	RefSeq	rRNA	3444784	3444902	.	-	.	ID=rna69;Parent=gene3647;Dbxref=GeneID:3797206;gbkey=rRNA;gene=rrfC;product=5S ribosomal RNA
NC_007606.1	RefSeq	exon	3444784	3444902	.	-	.	ID=id561;Parent=rna69;Dbxref=GeneID:3797206;gbkey=rRNA;gene=rrfC;product=5S ribosomal RNA
NC_007606.1	RefSeq	gene	3444996	3447897	.	-	.	ID=gene3648;Dbxref=GeneID:3797207;Name=rrlC;Note=SDY3717;gbkey=Gene;gene=rrlC;gene_biotype=rRNA;locus_tag=SDY_3717
NC_007606.1	RefSeq	rRNA	3444996	3447897	.	-	.	ID=rna70;Parent=gene3648;Dbxref=GeneID:3797207;gbkey=rRNA;gene=rrlC;product=23S ribosomal RNA
NC_007606.1	RefSeq	exon	3444996	3447897	.	-	.	ID=id562;Parent=rna70;Dbxref=GeneID:3797207;gbkey=rRNA;gene=rrlC;product=23S ribosomal RNA
NC_007606.1	RefSeq	gene	3448082	3448157	.	-	.	ID=gene3649;Dbxref=GeneID:3797208;Name=SDY_3718;Note=SDY3718;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3718
NC_007606.1	RefSeq	tRNA	3448082	3448157	.	-	.	ID=rna71;Parent=gene3649;Dbxref=GeneID:3797208;codons=58;gbkey=tRNA;product=tRNA-Glu
NC_007606.1	RefSeq	exon	3448082	3448157	.	-	.	ID=id563;Parent=rna71;Dbxref=GeneID:3797208;codons=58;gbkey=tRNA;product=tRNA-Glu
NC_007606.1	RefSeq	gene	3448244	3449785	.	-	.	ID=gene3650;Dbxref=GeneID:3797209;Name=rrsC;Note=SDY3719;gbkey=Gene;gene=rrsC;gene_biotype=rRNA;locus_tag=SDY_3719
NC_007606.1	RefSeq	rRNA	3448244	3449785	.	-	.	ID=rna72;Parent=gene3650;Dbxref=GeneID:3797209;gbkey=rRNA;gene=rrsC;product=16S ribosomal RNA
NC_007606.1	RefSeq	exon	3448244	3449785	.	-	.	ID=id564;Parent=rna72;Dbxref=GeneID:3797209;gbkey=rRNA;gene=rrsC;product=16S ribosomal RNA
NC_007606.1	RefSeq	gene	3450399	3451988	.	+	.	ID=gene3651;Dbxref=GeneID:3797210;Name=purH;Note=SDY3720;gbkey=Gene;gene=purH;gene_biotype=protein_coding;locus_tag=SDY_3720
NC_007606.1	RefSeq	CDS	3450399	3451988	.	+	0	ID=cds3234;Parent=gene3651;Dbxref=Genbank:YP_405167.1,GeneID:3797210;Name=YP_405167.1;Note=involved in de novo purine biosynthesis;gbkey=CDS;gene=purH;product=bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase;protein_id=YP_405167.1;transl_table=11
NC_007606.1	RefSeq	gene	3452000	3453289	.	+	.	ID=gene3652;Dbxref=GeneID:3797211;Name=purD;Note=SDY3721;gbkey=Gene;gene=purD;gene_biotype=protein_coding;locus_tag=SDY_3721
NC_007606.1	RefSeq	CDS	3452000	3453289	.	+	0	ID=cds3235;Parent=gene3652;Dbxref=Genbank:YP_405168.1,GeneID:3797211;Name=YP_405168.1;Note=catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis;gbkey=CDS;gene=purD;product=phosphoribosylamine--glycine ligase;protein_id=YP_405168.1;transl_table=11
NC_007606.1	RefSeq	gene	3453286	3454611	.	-	.	ID=gene3653;Dbxref=GeneID:3797212;Name=hydG;Note=SDY3722;gbkey=Gene;gene=hydG;gene_biotype=protein_coding;locus_tag=SDY_3722
NC_007606.1	RefSeq	CDS	3453286	3454611	.	-	0	ID=cds3236;Parent=gene3653;Dbxref=Genbank:YP_405169.1,GeneID:3797212;Name=YP_405169.1;Note=DNA-binding response regulator in two-component regulatory system with ZraS%3B response regulator/sigma54 interaction protein;gbkey=CDS;gene=hydG;product=transcriptional regulator ZraR;protein_id=YP_405169.1;transl_table=11
NC_007606.1	RefSeq	gene	3454608	3455984	.	-	.	ID=gene3654;Dbxref=GeneID:3797213;Name=hydH;Note=SDY3723;gbkey=Gene;gene=hydH;gene_biotype=protein_coding;locus_tag=SDY_3723
NC_007606.1	RefSeq	CDS	3454608	3455984	.	-	0	ID=cds3237;Parent=gene3654;Dbxref=Genbank:YP_405170.1,GeneID:3797213;Name=YP_405170.1;Note=Code: T%3B COG: COG0642;gbkey=CDS;gene=hydH;product=sensor protein ZraS;protein_id=YP_405170.1;transl_table=11
NC_007606.1	RefSeq	gene	3456222	3456641	.	+	.	ID=gene3655;Dbxref=GeneID:3797214;Name=zraP;Note=SDY3724;gbkey=Gene;gene=zraP;gene_biotype=protein_coding;locus_tag=SDY_3724
NC_007606.1	RefSeq	CDS	3456222	3456641	.	+	0	ID=cds3238;Parent=gene3655;Dbxref=Genbank:YP_405171.2,GeneID:3797214;Name=YP_405171.2;Note=Code: UNTP%3B COG: COG3678;gbkey=CDS;gene=zraP;product=zinc resistance protein;protein_id=YP_405171.2;transl_table=11
NC_007606.1	RefSeq	gene	3456643	3457338	.	-	.	ID=gene3656;Dbxref=GeneID:3797215;Name=yjaH;Note=SDY3725;gbkey=Gene;gene=yjaH;gene_biotype=protein_coding;locus_tag=SDY_3725
NC_007606.1	RefSeq	CDS	3456643	3457338	.	-	0	ID=cds3239;Parent=gene3656;Dbxref=Genbank:YP_405172.1,GeneID:3797215;Name=YP_405172.1;gbkey=CDS;gene=yjaH;product=hypothetical protein;protein_id=YP_405172.1;transl_table=11
NC_007606.1	RefSeq	gene	3457351	3457623	.	-	.	ID=gene3657;Dbxref=GeneID:3797216;Name=hupA;Note=SDY3726;gbkey=Gene;gene=hupA;gene_biotype=protein_coding;locus_tag=SDY_3726
NC_007606.1	RefSeq	CDS	3457351	3457623	.	-	0	ID=cds3240;Parent=gene3657;Dbxref=Genbank:YP_405173.1,GeneID:3797216;Name=YP_405173.1;Note=histone-like DNA-binding protein;gbkey=CDS;gene=hupA;product=transcriptional regulator HU subunit alpha;protein_id=YP_405173.1;transl_table=11
NC_007606.1	RefSeq	gene	3457810	3458400	.	-	.	ID=gene3658;Dbxref=GeneID:3797217;Name=yjaG;Note=SDY3727;gbkey=Gene;gene=yjaG;gene_biotype=protein_coding;locus_tag=SDY_3727
NC_007606.1	RefSeq	CDS	3457810	3458400	.	-	0	ID=cds3241;Parent=gene3658;Dbxref=Genbank:YP_405174.1,GeneID:3797217;Name=YP_405174.1;Note=Code: S%3B COG: COG3068;gbkey=CDS;gene=yjaG;product=hypothetical protein;protein_id=YP_405174.1;transl_table=11
NC_007606.1	RefSeq	gene	3458443	3459114	.	-	.	ID=gene3659;Dbxref=GeneID:3798272;Name=nfi;Note=SDY3728;gbkey=Gene;gene=nfi;gene_biotype=protein_coding;locus_tag=SDY_3728
NC_007606.1	RefSeq	CDS	3458443	3459114	.	-	0	ID=cds3242;Parent=gene3659;Dbxref=Genbank:YP_405175.1,GeneID:3798272;Name=YP_405175.1;Note=''Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA%3B cleaves DNA containing urea residues%2C AP sites%2C base mismatches%2C insertion/deletion mismatches%2C flaps%2C and pseudo-Y structures'';gbkey=CDS;gene=nfi;product=endonuclease V;protein_id=YP_405175.1;transl_table=11
NC_007606.1	RefSeq	gene	3459124	3460188	.	-	.	ID=gene3660;Dbxref=GeneID:3798273;Name=hemE;Note=SDY3729;gbkey=Gene;gene=hemE;gene_biotype=protein_coding;locus_tag=SDY_3729
NC_007606.1	RefSeq	CDS	3459124	3460188	.	-	0	ID=cds3243;Parent=gene3660;Dbxref=Genbank:YP_405176.1,GeneID:3798273;Name=YP_405176.1;Note=catalyzes the formation of coproporphyrinogen from uroporphyrinogen III;gbkey=CDS;gene=hemE;product=uroporphyrinogen decarboxylase;protein_id=YP_405176.1;transl_table=11
NC_007606.1	RefSeq	gene	3460228	3461001	.	-	.	ID=gene3661;Dbxref=GeneID:3798274;Name=nudC;Note=SDY3730;gbkey=Gene;gene=nudC;gene_biotype=protein_coding;locus_tag=SDY_3730
NC_007606.1	RefSeq	CDS	3460228	3461001	.	-	0	ID=cds3244;Parent=gene3661;Dbxref=Genbank:YP_405177.1,GeneID:3798274;Name=YP_405177.1;Note=can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH%3B requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates;gbkey=CDS;gene=nudC;product=NADH pyrophosphatase;protein_id=YP_405177.1;transl_table=11
NC_007606.1	RefSeq	gene	3461096	3461572	.	+	.	ID=gene3662;Dbxref=GeneID:3798275;Name=yjaE;Note=SDY3731;gbkey=Gene;gene=yjaE;gene_biotype=protein_coding;locus_tag=SDY_3731
NC_007606.1	RefSeq	CDS	3461096	3461572	.	+	0	ID=cds3245;Parent=gene3662;Dbxref=Genbank:YP_405178.1,GeneID:3798275;Name=YP_405178.1;Note=binds specifically to the major sigma factor sigma 70%3B active in stationary phase;gbkey=CDS;gene=yjaE;product=anti-RNA polymerase sigma 70 factor;protein_id=YP_405178.1;transl_table=11
NC_007606.1	RefSeq	gene	3461806	3463701	.	+	.	ID=gene3663;Dbxref=GeneID:3798276;Name=thiC;Note=SDY3732;gbkey=Gene;gene=thiC;gene_biotype=protein_coding;locus_tag=SDY_3732
NC_007606.1	RefSeq	CDS	3461806	3463701	.	+	0	ID=cds3246;Parent=gene3663;Dbxref=Genbank:YP_405179.1,GeneID:3798276;Name=YP_405179.1;Note=required for the synthesis of the hydromethylpyrimidine moiety of thiamine;gbkey=CDS;gene=thiC;product=thiamine biosynthesis protein ThiC;protein_id=YP_405179.1;transl_table=11
NC_007606.1	RefSeq	gene	3463701	3464336	.	+	.	ID=gene3664;Dbxref=GeneID:3798277;Name=thiE;Note=SDY3733;gbkey=Gene;gene=thiE;gene_biotype=protein_coding;locus_tag=SDY_3733
NC_007606.1	RefSeq	CDS	3463701	3464336	.	+	0	ID=cds3247;Parent=gene3664;Dbxref=Genbank:YP_405180.1,GeneID:3798277;Name=YP_405180.1;Note=catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate;gbkey=CDS;gene=thiE;product=thiamine-phosphate pyrophosphorylase;protein_id=YP_405180.1;transl_table=11
NC_007606.1	RefSeq	gene	3464329	3465084	.	+	.	ID=gene3665;Dbxref=GeneID:3798278;Name=thiF;Note=SDY3734;gbkey=Gene;gene=thiF;gene_biotype=protein_coding;locus_tag=SDY_3734
NC_007606.1	RefSeq	CDS	3464329	3465084	.	+	0	ID=cds3248;Parent=gene3665;Dbxref=Genbank:YP_405181.2,GeneID:3798278;Name=YP_405181.2;Note=Code: H%3B COG: COG0476;gbkey=CDS;gene=thiF;product=thiazole biosynthesis adenylyltransferase ThiF;protein_id=YP_405181.2;transl_table=11
NC_007606.1	RefSeq	gene	3465068	3465268	.	+	.	ID=gene3666;Dbxref=GeneID:3798279;Name=thiS;Note=SDY3735;gbkey=Gene;gene=thiS;gene_biotype=protein_coding;locus_tag=SDY_3735
NC_007606.1	RefSeq	CDS	3465068	3465268	.	+	0	ID=cds3249;Parent=gene3666;Dbxref=Genbank:YP_405182.1,GeneID:3798279;Name=YP_405182.1;Note=''with ThiF%2C ThiG%2C and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate'';gbkey=CDS;gene=thiS;product=sulfur carrier protein ThiS;protein_id=YP_405182.1;transl_table=11
NC_007606.1	RefSeq	gene	3465270	3466040	.	+	.	ID=gene3667;Dbxref=GeneID:3798280;Name=thiG;Note=SDY3736;gbkey=Gene;gene=thiG;gene_biotype=protein_coding;locus_tag=SDY_3736
NC_007606.1	RefSeq	CDS	3465270	3466040	.	+	0	ID=cds3250;Parent=gene3667;Dbxref=Genbank:YP_405183.2,GeneID:3798280;Name=YP_405183.2;Note=functions in thiamine (vitamin B1) biosynthesis%3B in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate;gbkey=CDS;gene=thiG;product=thiazole synthase;protein_id=YP_405183.2;transl_table=11
NC_007606.1	RefSeq	gene	3466037	3467170	.	+	.	ID=gene3668;Dbxref=GeneID:3798281;Name=thiH;Note=SDY3737;gbkey=Gene;gene=thiH;gene_biotype=protein_coding;locus_tag=SDY_3737
NC_007606.1	RefSeq	CDS	3466037	3467170	.	+	0	ID=cds3251;Parent=gene3668;Dbxref=Genbank:YP_405184.1,GeneID:3798281;Name=YP_405184.1;Note=''in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS%3B with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine%2C cysteine and 1-deoxy-D-xylulose-5-phosphate%3B forms a complex with ThiG%3B contains an iron-sulfur center'';gbkey=CDS;gene=thiH;product=thiamine biosynthesis protein ThiH;protein_id=YP_405184.1;transl_table=11
NC_007606.1	RefSeq	gene	3467580	3468893	.	-	.	ID=gene3669;Dbxref=GeneID:3798283;Name=htrC;Note=SDY3739%3B contains iso-IS1 insertion%3B original product: heat shock protein htrC;gbkey=Gene;gene=htrC;gene_biotype=pseudogene;locus_tag=SDY_3739;pseudo=true
NC_007606.1	RefSeq	region	3467783	3468548	.	+	.	ID=id565;gbkey=mobile_element;gene=htrC
NC_007606.1	RefSeq	gene	3467840	3468112	.	+	.	ID=gene3670;Dbxref=GeneID:18263152;Name=SDY_4766;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4766
NC_007606.1	RefSeq	CDS	3467840	3468112	.	+	0	ID=cds3252;Parent=gene3670;Dbxref=Genbank:YP_009000838.1,GeneID:18263152;Name=YP_009000838.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000838.1;transl_table=11
NC_007606.1	RefSeq	gene	3468139	3468534	.	+	.	ID=gene3671;Dbxref=GeneID:3798282;Name=SDY_3738;Note=SDY3738;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3738
NC_007606.1	RefSeq	CDS	3468139	3468534	.	+	0	ID=cds3253;Parent=gene3671;Dbxref=Genbank:YP_405185.1,GeneID:3798282;Name=YP_405185.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405185.1;transl_table=11
NC_007606.1	RefSeq	gene	3469106	3473329	.	-	.	ID=gene3672;Dbxref=GeneID:3798284;Name=rpoC;Note=SDY3740;gbkey=Gene;gene=rpoC;gene_biotype=protein_coding;locus_tag=SDY_3740
NC_007606.1	RefSeq	CDS	3469106	3473329	.	-	0	ID=cds3254;Parent=gene3672;Dbxref=Genbank:YP_405186.1,GeneID:3798284;Name=YP_405186.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter;gbkey=CDS;gene=rpoC;product=DNA-directed RNA polymerase subunit beta';protein_id=YP_405186.1;transl_table=11
NC_007606.1	RefSeq	gene	3473406	3477434	.	-	.	ID=gene3673;Dbxref=GeneID:3798285;Name=rpoB;Note=SDY3741;gbkey=Gene;gene=rpoB;gene_biotype=protein_coding;locus_tag=SDY_3741
NC_007606.1	RefSeq	CDS	3473406	3477434	.	-	0	ID=cds3255;Parent=gene3673;Dbxref=Genbank:YP_405187.1,GeneID:3798285;Name=YP_405187.1;Note=DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates%3B beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme;gbkey=CDS;gene=rpoB;product=DNA-directed RNA polymerase subunit beta;protein_id=YP_405187.1;transl_table=11
NC_007606.1	RefSeq	gene	3477743	3478108	.	-	.	ID=gene3674;Dbxref=GeneID:3798286;Name=rplL;Note=SDY3742;gbkey=Gene;gene=rplL;gene_biotype=protein_coding;locus_tag=SDY_3742
NC_007606.1	RefSeq	CDS	3477743	3478108	.	-	0	ID=cds3256;Parent=gene3674;Dbxref=Genbank:YP_405188.1,GeneID:3798286;Name=YP_405188.1;Note=''present in two forms%3B L12 is normal%2C while L7 is aminoacylated at the N-terminal serine%3B the only multicopy ribosomal protein%3B 4:1 ratio of L7/L12 per ribosome%3B two L12 dimers bind L10%3B critically important for translation efficiency and fidelity%3B stimulates GTPase activity of translation factors'';gbkey=CDS;gene=rplL;product=50S ribosomal protein L7/L12;protein_id=YP_405188.1;transl_table=11
NC_007606.1	RefSeq	gene	3478175	3478672	.	-	.	ID=gene3675;Dbxref=GeneID:3798287;Name=rplJ;Note=SDY3743;gbkey=Gene;gene=rplJ;gene_biotype=protein_coding;locus_tag=SDY_3743
NC_007606.1	RefSeq	CDS	3478175	3478672	.	-	0	ID=cds3257;Parent=gene3675;Dbxref=Genbank:YP_405189.1,GeneID:3798287;Name=YP_405189.1;Note=binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit;gbkey=CDS;gene=rplJ;product=50S ribosomal protein L10;protein_id=YP_405189.1;transl_table=11
NC_007606.1	RefSeq	gene	3479085	3479789	.	-	.	ID=gene3676;Dbxref=GeneID:3798288;Name=rplA;Note=SDY3744;gbkey=Gene;gene=rplA;gene_biotype=protein_coding;locus_tag=SDY_3744
NC_007606.1	RefSeq	CDS	3479085	3479789	.	-	0	ID=cds3258;Parent=gene3676;Dbxref=Genbank:YP_405190.1,GeneID:3798288;Name=YP_405190.1;Note=''in Escherichia coli and Methanococcus%2C this protein autoregulates expression%3B the binding site in the mRNA mimics the binding site in the 23S rRNA'';gbkey=CDS;gene=rplA;product=50S ribosomal protein L1;protein_id=YP_405190.1;transl_table=11
NC_007606.1	RefSeq	gene	3479793	3480221	.	-	.	ID=gene3677;Dbxref=GeneID:3798289;Name=rplK;Note=SDY3745;gbkey=Gene;gene=rplK;gene_biotype=protein_coding;locus_tag=SDY_3745
NC_007606.1	RefSeq	CDS	3479793	3480221	.	-	0	ID=cds3259;Parent=gene3677;Dbxref=Genbank:YP_405191.1,GeneID:3798289;Name=YP_405191.1;Note=binds directly to 23S ribosomal RNA;gbkey=CDS;gene=rplK;product=50S ribosomal protein L11;protein_id=YP_405191.1;transl_table=11
NC_007606.1	RefSeq	gene	3480380	3480925	.	-	.	ID=gene3678;Dbxref=GeneID:3798290;Name=nusG;Note=SDY3746;gbkey=Gene;gene=nusG;gene_biotype=protein_coding;locus_tag=SDY_3746
NC_007606.1	RefSeq	CDS	3480380	3480925	.	-	0	ID=cds3260;Parent=gene3678;Dbxref=Genbank:YP_405192.1,GeneID:3798290;Name=YP_405192.1;Note=Modulates Rho-dependent transcription termination;gbkey=CDS;gene=nusG;product=transcription antitermination protein NusG;protein_id=YP_405192.1;transl_table=11
NC_007606.1	RefSeq	gene	3480927	3481310	.	-	.	ID=gene3679;Dbxref=GeneID:3798291;Name=secE;Note=SDY3747;gbkey=Gene;gene=secE;gene_biotype=protein_coding;locus_tag=SDY_3747
NC_007606.1	RefSeq	CDS	3480927	3481310	.	-	0	ID=cds3261;Parent=gene3679;Dbxref=Genbank:YP_405193.1,GeneID:3798291;Name=YP_405193.1;Note=''forms a complex with SecY and SecG%3B SecYEG forms a  protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane%2C a process driven by ATP and a proton-motive force'';gbkey=CDS;gene=secE;product=preprotein translocase subunit SecE;protein_id=YP_405193.1;transl_table=11
NC_007606.1	RefSeq	gene	3481540	3482724	.	-	.	ID=gene3680;Dbxref=GeneID:3797937;Name=tufB;Note=SDY3748;gbkey=Gene;gene=tufB;gene_biotype=protein_coding;gene_synonym=tuf;locus_tag=SDY_3748
NC_007606.1	RefSeq	CDS	3481540	3482724	.	-	0	ID=cds3262;Parent=gene3680;Dbxref=Genbank:YP_405194.1,GeneID:3797937;Name=YP_405194.1;Note=''EF-Tu%3B promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis%3B when the tRNA anticodon matches the mRNA codon%2C GTP hydrolysis results%3B the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts%3B many prokaryotes have two copies of the gene encoding EF-Tu'';gbkey=CDS;gene=tufB;product=elongation factor Tu;protein_id=YP_405194.1;transl_table=11
NC_007606.1	RefSeq	gene	3482839	3482914	.	-	.	ID=gene3681;Dbxref=GeneID:3797938;Name=SDY_3749;Note=SDY3749;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3749
NC_007606.1	RefSeq	tRNA	3482839	3482914	.	-	.	ID=rna73;Parent=gene3681;Dbxref=GeneID:3797938;codons=37;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	exon	3482839	3482914	.	-	.	ID=id566;Parent=rna73;Dbxref=GeneID:3797938;codons=37;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	gene	3482921	3482995	.	-	.	ID=gene3682;Dbxref=GeneID:3797939;Name=SDY_3750;Note=SDY3750;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3750
NC_007606.1	RefSeq	tRNA	3482921	3482995	.	-	.	ID=rna74;Parent=gene3682;Dbxref=GeneID:3797939;codons=62;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	exon	3482921	3482995	.	-	.	ID=id567;Parent=rna74;Dbxref=GeneID:3797939;codons=62;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	gene	3483112	3483196	.	-	.	ID=gene3683;Dbxref=GeneID:3797940;Name=SDY_3751;Note=SDY3751;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3751
NC_007606.1	RefSeq	tRNA	3483112	3483196	.	-	.	ID=rna75;Parent=gene3683;Dbxref=GeneID:3797940;codons=9;gbkey=tRNA;product=tRNA-Tyr
NC_007606.1	RefSeq	exon	3483112	3483196	.	-	.	ID=id568;Parent=rna75;Dbxref=GeneID:3797940;codons=9;gbkey=tRNA;product=tRNA-Tyr
NC_007606.1	RefSeq	gene	3483205	3483280	.	-	.	ID=gene3684;Dbxref=GeneID:3797941;Name=SDY_3752;Note=SDY3752;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3752
NC_007606.1	RefSeq	tRNA	3483205	3483280	.	-	.	ID=rna76;Parent=gene3684;Dbxref=GeneID:3797941;codons=38;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	exon	3483205	3483280	.	-	.	ID=id569;Parent=rna76;Dbxref=GeneID:3797941;codons=38;gbkey=tRNA;product=tRNA-Thr
NC_007606.1	RefSeq	gene	3483642	3484592	.	+	.	ID=gene3685;Dbxref=GeneID:3797943;Name=coaA;Note=SDY3754;gbkey=Gene;gene=coaA;gene_biotype=protein_coding;locus_tag=SDY_3754
NC_007606.1	RefSeq	CDS	3483642	3484592	.	+	0	ID=cds3263;Parent=gene3685;Dbxref=Genbank:YP_405196.1,GeneID:3797943;Name=YP_405196.1;Note=catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis;gbkey=CDS;gene=coaA;product=pantothenate kinase;protein_id=YP_405196.1;transl_table=11
NC_007606.1	RefSeq	gene	3484621	3485586	.	-	.	ID=gene3686;Dbxref=GeneID:3797944;Name=birA;Note=SDY3755;gbkey=Gene;gene=birA;gene_biotype=protein_coding;locus_tag=SDY_3755
NC_007606.1	RefSeq	CDS	3484621	3485586	.	-	0	ID=cds3264;Parent=gene3686;Dbxref=Genbank:YP_405197.1,GeneID:3797944;Name=YP_405197.1;Note=''catalyzes the formation of biotinyl-5'-AMP%2C also acts as a transcriptional repressor of the biotin operon'';gbkey=CDS;gene=birA;product=biotin--protein ligase;protein_id=YP_405197.1;transl_table=11
NC_007606.1	RefSeq	gene	3485583	3486611	.	-	.	ID=gene3687;Dbxref=GeneID:3797945;Name=murB;Note=SDY3756;gbkey=Gene;gene=murB;gene_biotype=protein_coding;locus_tag=SDY_3756
NC_007606.1	RefSeq	CDS	3485583	3486611	.	-	0	ID=cds3265;Parent=gene3687;Dbxref=Genbank:YP_405198.1,GeneID:3797945;Name=YP_405198.1;Note=catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis;gbkey=CDS;gene=murB;product=UDP-N-acetylenolpyruvoylglucosamine reductase;protein_id=YP_405198.1;transl_table=11
NC_007606.1	RefSeq	gene	3486746	3486864	.	-	.	ID=gene3688;Dbxref=GeneID:3797946;Name=rrfA;Note=SDY3757;gbkey=Gene;gene=rrfA;gene_biotype=rRNA;locus_tag=SDY_3757
NC_007606.1	RefSeq	rRNA	3486746	3486864	.	-	.	ID=rna77;Parent=gene3688;Dbxref=GeneID:3797946;gbkey=rRNA;gene=rrfA;product=5S ribosomal RNA
NC_007606.1	RefSeq	exon	3486746	3486864	.	-	.	ID=id570;Parent=rna77;Dbxref=GeneID:3797946;gbkey=rRNA;gene=rrfA;product=5S ribosomal RNA
NC_007606.1	RefSeq	gene	3486958	3489859	.	-	.	ID=gene3689;Dbxref=GeneID:3797947;Name=rrlA;Note=SDY3758;gbkey=Gene;gene=rrlA;gene_biotype=rRNA;locus_tag=SDY_3758
NC_007606.1	RefSeq	rRNA	3486958	3489859	.	-	.	ID=rna78;Parent=gene3689;Dbxref=GeneID:3797947;gbkey=rRNA;gene=rrlA;product=23S ribosomal RNA
NC_007606.1	RefSeq	exon	3486958	3489859	.	-	.	ID=id571;Parent=rna78;Dbxref=GeneID:3797947;gbkey=rRNA;gene=rrlA;product=23S ribosomal RNA
NC_007606.1	RefSeq	gene	3490044	3490119	.	-	.	ID=gene3690;Dbxref=GeneID:3797948;Name=SDY_3759;Note=SDY3759;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3759
NC_007606.1	RefSeq	tRNA	3490044	3490119	.	-	.	ID=rna79;Parent=gene3690;Dbxref=GeneID:3797948;codons=58;gbkey=tRNA;product=tRNA-Glu
NC_007606.1	RefSeq	exon	3490044	3490119	.	-	.	ID=id572;Parent=rna79;Dbxref=GeneID:3797948;codons=58;gbkey=tRNA;product=tRNA-Glu
NC_007606.1	RefSeq	gene	3490206	3491747	.	-	.	ID=gene3691;Dbxref=GeneID:3798618;Name=rrsA;Note=SDY3760;gbkey=Gene;gene=rrsA;gene_biotype=rRNA;locus_tag=SDY_3760
NC_007606.1	RefSeq	rRNA	3490206	3491747	.	-	.	ID=rna80;Parent=gene3691;Dbxref=GeneID:3798618;gbkey=rRNA;gene=rrsA;product=16S ribosomal RNA
NC_007606.1	RefSeq	exon	3490206	3491747	.	-	.	ID=id573;Parent=rna80;Dbxref=GeneID:3798618;gbkey=rRNA;gene=rrsA;product=16S ribosomal RNA
NC_007606.1	RefSeq	gene	3492121	3492978	.	-	.	ID=gene3692;Dbxref=GeneID:3798619;Name=murI;Note=SDY3761;gbkey=Gene;gene=murI;gene_biotype=protein_coding;locus_tag=SDY_3761
NC_007606.1	RefSeq	CDS	3492121	3492978	.	-	0	ID=cds3266;Parent=gene3692;Dbxref=Genbank:YP_405199.2,GeneID:3798619;Name=YP_405199.2;Note=''converts L-glutamate to D-glutamate%2C a component of peptidoglycan'';gbkey=CDS;gene=murI;product=glutamate racemase;protein_id=YP_405199.2;transl_table=11
NC_007606.1	RefSeq	gene	3492923	3494767	.	-	.	ID=gene3693;Dbxref=GeneID:3798620;Name=btuB;Note=SDY3762;gbkey=Gene;gene=btuB;gene_biotype=protein_coding;locus_tag=SDY_3762
NC_007606.1	RefSeq	CDS	3492923	3494767	.	-	0	ID=cds3267;Parent=gene3693;Dbxref=Genbank:YP_405200.1,GeneID:3798620;Name=YP_405200.1;Note=involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space;gbkey=CDS;gene=btuB;product=vitamin B12/cobalamin outer membrane transporter;protein_id=YP_405200.1;transl_table=11
NC_007606.1	RefSeq	gene	3495136	3496236	.	+	.	ID=gene3694;Dbxref=GeneID:3798621;Name=trmA;Note=SDY3763;gbkey=Gene;gene=trmA;gene_biotype=protein_coding;locus_tag=SDY_3763
NC_007606.1	RefSeq	CDS	3495136	3496236	.	+	0	ID=cds3268;Parent=gene3694;Dbxref=Genbank:YP_405201.1,GeneID:3798621;Name=YP_405201.1;Note=catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs;gbkey=CDS;gene=trmA;product=tRNA (uracil-5-)-methyltransferase;protein_id=YP_405201.1;transl_table=11
NC_007606.1	RefSeq	gene	3496276	3496635	.	-	.	ID=gene3695;Dbxref=GeneID:3798622;Name=yijD;Note=SDY3764;gbkey=Gene;gene=yijD;gene_biotype=protein_coding;locus_tag=SDY_3764
NC_007606.1	RefSeq	CDS	3496276	3496635	.	-	0	ID=cds3269;Parent=gene3695;Dbxref=Genbank:YP_405202.1,GeneID:3798622;Name=YP_405202.1;gbkey=CDS;gene=yijD;product=hypothetical protein;protein_id=YP_405202.1;transl_table=11
NC_007606.1	RefSeq	gene	3496635	3497339	.	-	.	ID=gene3696;Dbxref=GeneID:3798623;Name=yijC;Note=SDY3765;gbkey=Gene;gene=yijC;gene_biotype=protein_coding;locus_tag=SDY_3765
NC_007606.1	RefSeq	CDS	3496635	3497339	.	-	0	ID=cds3270;Parent=gene3696;Dbxref=Genbank:YP_405203.1,GeneID:3798623;Name=YP_405203.1;Note=''negatively controls the expression of fabA and fabB%2C genes involved in the unsaturated fatty acid biosynthesis'';gbkey=CDS;gene=yijC;product=DNA-binding transcriptional repressor FabR;protein_id=YP_405203.1;transl_table=11
NC_007606.1	RefSeq	region	3497924	3498692	.	+	.	ID=id574;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3498027	3498255	.	+	.	ID=gene3697;Dbxref=GeneID:3798624;Name=SDY_3766;Note=SDY3766;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3766;pseudo=true;pseudogene=allelic
NC_007606.1	RefSeq	gene	3498300	3498677	.	+	.	ID=gene3698;Dbxref=GeneID:3798625;Name=insB;Note=SDY3767;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3767
NC_007606.1	RefSeq	CDS	3498300	3498677	.	+	0	ID=cds3271;Parent=gene3698;Dbxref=Genbank:YP_405205.1,GeneID:3798625;Name=YP_405205.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405205.1;transl_table=11
NC_007606.1	RefSeq	gene	3499526	3500691	.	-	.	ID=gene3699;Dbxref=GeneID:3798627;Name=SDY_3769;Note=SDY3769;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3769;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	3500827	3501591	.	-	.	ID=id575;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3501678	3502286	.	-	.	ID=gene3700;Dbxref=GeneID:3798630;Name=yiiX;Note=SDY3772;gbkey=Gene;gene=yiiX;gene_biotype=protein_coding;locus_tag=SDY_3772
NC_007606.1	RefSeq	CDS	3501678	3502286	.	-	0	ID=cds3272;Parent=gene3700;Dbxref=Genbank:YP_405209.1,GeneID:3798630;Name=YP_405209.1;Note=member of the NlpC/P60 superfamily of peptidases;gbkey=CDS;gene=yiiX;product=peptidoglycan peptidase;protein_id=YP_405209.1;transl_table=11
NC_007606.1	RefSeq	gene	3502346	3502663	.	-	.	ID=gene3701;Dbxref=GeneID:3798631;Name=metJ;Note=SDY3773;gbkey=Gene;gene=metJ;gene_biotype=protein_coding;locus_tag=SDY_3773
NC_007606.1	RefSeq	CDS	3502346	3502663	.	-	0	ID=cds3273;Parent=gene3701;Dbxref=Genbank:YP_405210.1,GeneID:3798631;Name=YP_405210.1;Note=when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis;gbkey=CDS;gene=metJ;product=transcriptional repressor MetJ;protein_id=YP_405210.1;transl_table=11
NC_007606.1	RefSeq	gene	3502940	3504100	.	+	.	ID=gene3702;Dbxref=GeneID:3798632;Name=metB;Note=SDY3774;gbkey=Gene;gene=metB;gene_biotype=protein_coding;locus_tag=SDY_3774
NC_007606.1	RefSeq	CDS	3502940	3504100	.	+	0	ID=cds3274;Parent=gene3702;Dbxref=Genbank:YP_405211.1,GeneID:3798632;Name=YP_405211.1;Note=catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine;gbkey=CDS;gene=metB;product=cystathionine gamma-synthase;protein_id=YP_405211.1;transl_table=11
NC_007606.1	RefSeq	gene	3504103	3506535	.	+	.	ID=gene3703;Dbxref=GeneID:3798633;Name=metL;Note=SDY3775;gbkey=Gene;gene=metL;gene_biotype=protein_coding;gene_synonym=metM;locus_tag=SDY_3775
NC_007606.1	RefSeq	CDS	3504103	3506535	.	+	0	ID=cds3275;Parent=gene3703;Dbxref=Genbank:YP_405212.1,GeneID:3798633;Name=YP_405212.1;Note=multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine%3B functions in a number of amino acid biosynthetic pathways;gbkey=CDS;gene=metL;product=bifunctional aspartate kinase II/homoserine dehydrogenase II;protein_id=YP_405212.1;transl_table=11
NC_007606.1	RefSeq	gene	3506884	3507774	.	+	.	ID=gene3704;Dbxref=GeneID:3798634;Name=metF;Note=SDY3776;gbkey=Gene;gene=metF;gene_biotype=protein_coding;locus_tag=SDY_3776
NC_007606.1	RefSeq	CDS	3506884	3507774	.	+	0	ID=cds3276;Parent=gene3704;Dbxref=Genbank:YP_405213.1,GeneID:3798634;Name=YP_405213.1;Note=''MTHFR%3B catalyzes NADH-linked reduction of 5%2C10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor'';gbkey=CDS;gene=metF;product=5%2C10-methylenetetrahydrofolate reductase;protein_id=YP_405213.1;transl_table=11
NC_007606.1	RefSeq	gene	3508103	3510215	.	+	.	ID=gene3705;Dbxref=GeneID:3798635;Name=katG;Note=SDY3777%3B frameshift%3B original product: catalase%3B hydroperoxidase HPI(I);gbkey=Gene;gene=katG;gene_biotype=pseudogene;locus_tag=SDY_3777;pseudo=true
NC_007606.1	RefSeq	gene	3510276	3511214	.	+	.	ID=gene3706;Dbxref=GeneID:3798636;Name=yijE;Note=SDY3778;gbkey=Gene;gene=yijE;gene_biotype=protein_coding;locus_tag=SDY_3778
NC_007606.1	RefSeq	CDS	3510276	3511214	.	+	0	ID=cds3277;Parent=gene3706;Dbxref=Genbank:YP_405214.1,GeneID:3798636;Name=YP_405214.1;Note=Code: GER%3B COG: COG0697;gbkey=CDS;gene=yijE;product=hypothetical protein;protein_id=YP_405214.1;transl_table=11
NC_007606.1	RefSeq	gene	3511241	3511858	.	-	.	ID=gene3707;Dbxref=GeneID:3798505;Name=yijF;Note=SDY3779;gbkey=Gene;gene=yijF;gene_biotype=protein_coding;locus_tag=SDY_3779
NC_007606.1	RefSeq	CDS	3511241	3511858	.	-	0	ID=cds3278;Parent=gene3707;Dbxref=Genbank:YP_405215.1,GeneID:3798505;Name=YP_405215.1;Note=Code: S%3B COG: COG3738;gbkey=CDS;gene=yijF;product=hypothetical protein;protein_id=YP_405215.1;transl_table=11
NC_007606.1	RefSeq	gene	3512132	3513235	.	-	.	ID=gene3708;Dbxref=GeneID:3798506;Name=gldA;Note=SDY3780;gbkey=Gene;gene=gldA;gene_biotype=protein_coding;locus_tag=SDY_3780
NC_007606.1	RefSeq	CDS	3512132	3513235	.	-	0	ID=cds3279;Parent=gene3708;Dbxref=Genbank:YP_405216.2,GeneID:3798506;Name=YP_405216.2;Note=forms dimers and octamers%3B involved in conversion of glycerol to dihydroxy-acetone;gbkey=CDS;gene=gldA;product=glycerol dehydrogenase;protein_id=YP_405216.2;transl_table=11
NC_007606.1	RefSeq	gene	3513246	3513908	.	-	.	ID=gene3709;Dbxref=GeneID:3798507;Name=talC;Note=SDY3781;gbkey=Gene;gene=talC;gene_biotype=protein_coding;locus_tag=SDY_3781
NC_007606.1	RefSeq	CDS	3513246	3513908	.	-	0	ID=cds3280;Parent=gene3709;Dbxref=Genbank:YP_405217.1,GeneID:3798507;Name=YP_405217.1;Note=similar to transaldolase from Escherichia coli%3B many organisms have multiple copies;gbkey=CDS;gene=talC;product=fructose-6-phosphate aldolase;protein_id=YP_405217.1;transl_table=11
NC_007606.1	RefSeq	gene	3513920	3516055	.	-	.	ID=gene3710;Dbxref=GeneID:3798508;Name=ptsA;Note=SDY3782;gbkey=Gene;gene=ptsA;gene_biotype=protein_coding;locus_tag=SDY_3782
NC_007606.1	RefSeq	CDS	3513920	3516055	.	-	0	ID=cds3281;Parent=gene3710;Dbxref=Genbank:YP_405218.1,GeneID:3798508;Name=YP_405218.1;Note=Code: G%3B COG: COG1080;gbkey=CDS;gene=ptsA;product=PTS system transporter subunit I phosphoenolpyruvate-protein kinase /IIA;protein_id=YP_405218.1;transl_table=11
NC_007606.1	RefSeq	gene	3516730	3517809	.	+	.	ID=gene3711;Dbxref=GeneID:3798510;Name=frwC;Note=SDY3784;gbkey=Gene;gene=frwC;gene_biotype=protein_coding;locus_tag=SDY_3784
NC_007606.1	RefSeq	CDS	3516730	3517809	.	+	0	ID=cds3282;Parent=gene3711;Dbxref=Genbank:YP_405220.1,GeneID:3798510;Name=YP_405220.1;Note=''FrwC with FrwB%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B forms translocation channel and contains the specific substrate-binding site'';gbkey=CDS;gene=frwC;product=PTS system fructose-like transporter subunit IIC;protein_id=YP_405220.1;transl_table=11
NC_007606.1	RefSeq	gene	3517824	3518144	.	+	.	ID=gene3712;Dbxref=GeneID:3798511;Name=frwB;Note=SDY3785;gbkey=Gene;gene=frwB;gene_biotype=protein_coding;locus_tag=SDY_3785
NC_007606.1	RefSeq	CDS	3517824	3518144	.	+	0	ID=cds3283;Parent=gene3712;Dbxref=Genbank:YP_405221.1,GeneID:3798511;Name=YP_405221.1;Note=''FrwB with FrwC%2C FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell%3B cytoplasmic protein that interacts with complex EIIA%3B contains the second phosphorylation site of the PTS'';gbkey=CDS;gene=frwB;product=PTS system fructose-like transporter subunit IIB;protein_id=YP_405221.1;transl_table=11
NC_007606.1	RefSeq	gene	3518195	3520492	.	+	.	ID=gene3713;Dbxref=GeneID:3798512;Name=pflD;Note=SDY3786;gbkey=Gene;gene=pflD;gene_biotype=protein_coding;locus_tag=SDY_3786
NC_007606.1	RefSeq	CDS	3518195	3520492	.	+	0	ID=cds3284;Parent=gene3713;Dbxref=Genbank:YP_405222.1,GeneID:3798512;Name=YP_405222.1;Note=involved in production of D-lactate from glucose under microaerobic conditions%3B cytoplasmic protein;gbkey=CDS;gene=pflD;product=formate acetyltransferase 2;protein_id=YP_405222.1;transl_table=11
NC_007606.1	RefSeq	gene	3520458	3521336	.	+	.	ID=gene3714;Dbxref=GeneID:3798513;Name=pflC;Note=SDY3787;gbkey=Gene;gene=pflC;gene_biotype=protein_coding;locus_tag=SDY_3787
NC_007606.1	RefSeq	CDS	3520458	3521336	.	+	0	ID=cds3285;Parent=gene3714;Dbxref=Genbank:YP_405223.1,GeneID:3798513;Name=YP_405223.1;Note=Code: O%3B COG: COG1180;gbkey=CDS;gene=pflC;product=pyruvate formate lyase II activase;protein_id=YP_405223.1;transl_table=11
NC_007606.1	RefSeq	gene	3521338	3521679	.	+	.	ID=gene3715;Dbxref=GeneID:3798514;Name=frwD;Note=SDY3788;gbkey=Gene;gene=frwD;gene_biotype=protein_coding;locus_tag=SDY_3788
NC_007606.1	RefSeq	CDS	3521338	3521679	.	+	0	ID=cds3286;Parent=gene3715;Dbxref=Genbank:YP_405224.1,GeneID:3798514;Name=YP_405224.1;Note=''FrwD with FrwB%2C FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell%3B phosphorylated by EIIA%3B FrwB homolog'';gbkey=CDS;gene=frwD;product=PTS system fructose-like transporter subunit IIB;protein_id=YP_405224.1;transl_table=11
NC_007606.1	RefSeq	gene	3521666	3522517	.	-	.	ID=gene3716;Dbxref=GeneID:3798515;Name=yijO;Note=SDY3789;gbkey=Gene;gene=yijO;gene_biotype=protein_coding;locus_tag=SDY_3789
NC_007606.1	RefSeq	CDS	3521666	3522517	.	-	0	ID=cds3287;Parent=gene3716;Dbxref=Genbank:YP_405225.1,GeneID:3798515;Name=YP_405225.1;Note=Code: K%3B COG: COG2207;gbkey=CDS;gene=yijO;product=AraC family transcriptional regulator;protein_id=YP_405225.1;transl_table=11
NC_007606.1	RefSeq	gene	3522666	3524399	.	-	.	ID=gene3717;Dbxref=GeneID:3798516;Name=yijP;Note=SDY3790;gbkey=Gene;gene=yijP;gene_biotype=protein_coding;locus_tag=SDY_3790
NC_007606.1	RefSeq	CDS	3522666	3524399	.	-	0	ID=cds3288;Parent=gene3717;Dbxref=Genbank:YP_405226.1,GeneID:3798516;Name=YP_405226.1;Note=Code: R%3B COG: COG2194;gbkey=CDS;gene=yijP;product=hypothetical protein;protein_id=YP_405226.1;transl_table=11
NC_007606.1	RefSeq	gene	3524581	3527232	.	-	.	ID=gene3718;Dbxref=GeneID:3798517;Name=ppc;Note=SDY3791;gbkey=Gene;gene=ppc;gene_biotype=protein_coding;locus_tag=SDY_3791
NC_007606.1	RefSeq	CDS	3524581	3527232	.	-	0	ID=cds3289;Parent=gene3718;Dbxref=Genbank:YP_405227.1,GeneID:3798517;Name=YP_405227.1;Note=catalyzes the formation of oxaloacetate from phosphoenolpyruvate;gbkey=CDS;gene=ppc;product=phosphoenolpyruvate carboxylase;protein_id=YP_405227.1;transl_table=11
NC_007606.1	RefSeq	gene	3527707	3528858	.	-	.	ID=gene3719;Dbxref=GeneID:3798518;Name=argE;Note=SDY3792;gbkey=Gene;gene=argE;gene_biotype=protein_coding;locus_tag=SDY_3792
NC_007606.1	RefSeq	CDS	3527707	3528858	.	-	0	ID=cds3290;Parent=gene3719;Dbxref=Genbank:YP_405228.1,GeneID:3798518;Name=YP_405228.1;Note=catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis;gbkey=CDS;gene=argE;product=acetylornithine deacetylase;protein_id=YP_405228.1;transl_table=11
NC_007606.1	RefSeq	gene	3529012	3530016	.	+	.	ID=gene3720;Dbxref=GeneID:3798519;Name=argC;Note=SDY3793;gbkey=Gene;gene=argC;gene_biotype=protein_coding;locus_tag=SDY_3793
NC_007606.1	RefSeq	CDS	3529012	3530016	.	+	0	ID=cds3291;Parent=gene3720;Dbxref=Genbank:YP_405229.1,GeneID:3798519;Name=YP_405229.1;Note=''catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis%3B involved in both the arginine and lysine biosynthetic pathways%3B lysine is produced via the AAA pathway%2C lysine from alpha-aminoadipate'';gbkey=CDS;gene=argC;product=N-acetyl-gamma-glutamyl-phosphate reductase;protein_id=YP_405229.1;transl_table=11
NC_007606.1	RefSeq	gene	3530027	3530800	.	+	.	ID=gene3721;Dbxref=GeneID:3798520;Name=argB;Note=SDY3794;gbkey=Gene;gene=argB;gene_biotype=protein_coding;locus_tag=SDY_3794
NC_007606.1	RefSeq	CDS	3530027	3530800	.	+	0	ID=cds3292;Parent=gene3721;Dbxref=Genbank:YP_405230.2,GeneID:3798520;Name=YP_405230.2;Note=catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate;gbkey=CDS;gene=argB;product=acetylglutamate kinase;protein_id=YP_405230.2;transl_table=11
NC_007606.1	RefSeq	gene	3530861	3532234	.	+	.	ID=gene3722;Dbxref=GeneID:3798521;Name=argH;Note=SDY3795;gbkey=Gene;gene=argH;gene_biotype=protein_coding;locus_tag=SDY_3795
NC_007606.1	RefSeq	CDS	3530861	3532234	.	+	0	ID=cds3293;Parent=gene3722;Dbxref=Genbank:YP_405231.1,GeneID:3798521;Name=YP_405231.1;Note=catalyzes the formation of arginine from (N-L-arginino)succinate;gbkey=CDS;gene=argH;product=argininosuccinate lyase;protein_id=YP_405231.1;transl_table=11
NC_007606.1	RefSeq	gene	3532501	3533418	.	+	.	ID=gene3723;Dbxref=GeneID:3798522;Name=oxyR;Note=SDY3796;gbkey=Gene;gene=oxyR;gene_biotype=protein_coding;locus_tag=SDY_3796
NC_007606.1	RefSeq	CDS	3532501	3533418	.	+	0	ID=cds3294;Parent=gene3723;Dbxref=Genbank:YP_405232.1,GeneID:3798522;Name=YP_405232.1;Note=''Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG%2C gor%2C ahpC%2C ahpF%2C oxyS%2C dps%2C fur and grxA'';gbkey=CDS;gene=oxyR;product=DNA-binding transcriptional regulator OxyR;protein_id=YP_405232.1;transl_table=11
NC_007606.1	RefSeq	gene	3533401	3534801	.	-	.	ID=gene3724;Dbxref=GeneID:3798523;Name=udhA;Note=SDY3797;gbkey=Gene;gene=udhA;gene_biotype=protein_coding;locus_tag=SDY_3797
NC_007606.1	RefSeq	CDS	3533401	3534801	.	-	0	ID=cds3295;Parent=gene3724;Dbxref=Genbank:YP_405233.2,GeneID:3798523;Name=YP_405233.2;Note=catalyzes the conversion of NADPH to NADH;gbkey=CDS;gene=udhA;product=soluble pyridine nucleotide transhydrogenase;protein_id=YP_405233.2;transl_table=11
NC_007606.1	RefSeq	region	3535002	3535768	.	+	.	ID=id576;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3535059	3535331	.	+	.	ID=gene3725;Dbxref=GeneID:18263153;Name=SDY_4767;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4767
NC_007606.1	RefSeq	CDS	3535059	3535331	.	+	0	ID=cds3296;Parent=gene3725;Dbxref=Genbank:YP_009000839.1,GeneID:18263153;Name=YP_009000839.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000839.1;transl_table=11
NC_007606.1	RefSeq	gene	3535358	3535753	.	+	.	ID=gene3726;Dbxref=GeneID:3799864;Name=SDY_3799;Note=SDY3799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3799
NC_007606.1	RefSeq	CDS	3535358	3535753	.	+	0	ID=cds3297;Parent=gene3726;Dbxref=Genbank:YP_405235.1,GeneID:3799864;Name=YP_405235.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405235.1;transl_table=11
NC_007606.1	RefSeq	gene	3535728	3539369	.	-	.	ID=gene3727;Dbxref=GeneID:3799865;Name=rhsB;Note=SDY3800;gbkey=Gene;gene=rhsB;gene_biotype=protein_coding;locus_tag=SDY_3800
NC_007606.1	RefSeq	CDS	3535728	3539369	.	-	0	ID=cds3298;Parent=gene3727;Dbxref=Genbank:YP_405236.1,GeneID:3799865;Name=YP_405236.1;Note=Code: M%3B COG: COG3209;gbkey=CDS;gene=rhsB;product=rhs element protein RhsB;protein_id=YP_405236.1;transl_table=11
NC_007606.1	RefSeq	gene	3539529	3539741	.	-	.	ID=gene3728;Dbxref=GeneID:3799866;Name=rpmE;Note=SDY3801;gbkey=Gene;gene=rpmE;gene_biotype=protein_coding;locus_tag=SDY_3801
NC_007606.1	RefSeq	CDS	3539529	3539741	.	-	0	ID=cds3299;Parent=gene3728;Dbxref=Genbank:YP_405237.1,GeneID:3799866;Name=YP_405237.1;Note=''RpmE%3B there appears to be two types of ribosomal proteins L31 in bacterial genomes%3B some contain a CxxC motif while others do not%3B Bacillus subtilis has both types%3B the proteins in this cluster have the CXXC motif%3B RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth%3B expression of ytiA is controlled by a zinc-specific transcriptional repressor%3B RpmE contains one zinc ion and a CxxC motif is responsible for this binding%3B forms an RNP particle along with proteins L5%2C L18%2C and L25 and 5S rRNA%3B found crosslinked to L2 and L25 and EF-G%3B may be near the peptidyltransferase site of the 50S ribosome'';gbkey=CDS;gene=rpmE;product=50S ribosomal protein L31;protein_id=YP_405237.1;transl_table=11
NC_007606.1	RefSeq	gene	3539944	3542142	.	+	.	ID=gene3729;Dbxref=GeneID:3799867;Name=priA;Note=SDY3802;gbkey=Gene;gene=priA;gene_biotype=protein_coding;locus_tag=SDY_3802
NC_007606.1	RefSeq	CDS	3539944	3542142	.	+	0	ID=cds3300;Parent=gene3729;Dbxref=Genbank:YP_405238.1,GeneID:3799867;Name=YP_405238.1;Note=''binding of PriA to forked DNA starts the assembly of the primosome%2C also possesses 3'-5' helicase activity'';gbkey=CDS;gene=priA;product=primosome assembly protein PriA;protein_id=YP_405238.1;transl_table=11
NC_007606.1	RefSeq	gene	3542298	3543323	.	+	.	ID=gene3730;Dbxref=GeneID:3799868;Name=cytR;Note=SDY3803;gbkey=Gene;gene=cytR;gene_biotype=protein_coding;locus_tag=SDY_3803
NC_007606.1	RefSeq	CDS	3542298	3543323	.	+	0	ID=cds3301;Parent=gene3730;Dbxref=Genbank:YP_405239.1,GeneID:3799868;Name=YP_405239.1;Note=''negatively controls the transcription initiation of genes such as deoCABD%2C udp%2C and cdd encoding catabolizing enzymes and nupC%2C nupG%2C and tsx encoding transporting and pore-forming proteins'';gbkey=CDS;gene=cytR;product=DNA-binding transcriptional regulator CytR;protein_id=YP_405239.1;transl_table=11
NC_007606.1	RefSeq	gene	3543415	3544374	.	+	.	ID=gene3731;Dbxref=GeneID:3799869;Name=ftsN;Note=SDY3804;gbkey=Gene;gene=ftsN;gene_biotype=protein_coding;locus_tag=SDY_3804
NC_007606.1	RefSeq	CDS	3543415	3544374	.	+	0	ID=cds3302;Parent=gene3731;Dbxref=Genbank:YP_405240.1,GeneID:3799869;Name=YP_405240.1;Note=Code: D%3B COG: COG3087;gbkey=CDS;gene=ftsN;product=cell division protein FtsN;protein_id=YP_405240.1;transl_table=11
NC_007606.1	RefSeq	gene	3544467	3544997	.	+	.	ID=gene3732;Dbxref=GeneID:3799870;Name=hslV;Note=SDY3805;gbkey=Gene;gene=hslV;gene_biotype=protein_coding;locus_tag=SDY_3805
NC_007606.1	RefSeq	CDS	3544467	3544997	.	+	0	ID=cds3303;Parent=gene3732;Dbxref=Genbank:YP_405241.1,GeneID:3799870;Name=YP_405241.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslV;product=ATP-dependent protease peptidase subunit;protein_id=YP_405241.1;transl_table=11
NC_007606.1	RefSeq	gene	3545007	3546338	.	+	.	ID=gene3733;Dbxref=GeneID:3799871;Name=hslU;Note=SDY3806;gbkey=Gene;gene=hslU;gene_biotype=protein_coding;locus_tag=SDY_3806
NC_007606.1	RefSeq	CDS	3545007	3546338	.	+	0	ID=cds3304;Parent=gene3733;Dbxref=Genbank:YP_405242.1,GeneID:3799871;Name=YP_405242.1;Note=heat shock protein involved in degradation of misfolded proteins;gbkey=CDS;gene=hslU;product=ATP-dependent protease ATP-binding subunit HslU;protein_id=YP_405242.1;transl_table=11
NC_007606.1	RefSeq	gene	3546405	3547331	.	+	.	ID=gene3734;Dbxref=GeneID:3799872;Name=menA;Note=SDY3807;gbkey=Gene;gene=menA;gene_biotype=protein_coding;locus_tag=SDY_3807
NC_007606.1	RefSeq	CDS	3546405	3547331	.	+	0	ID=cds3305;Parent=gene3734;Dbxref=Genbank:YP_405243.1,GeneID:3799872;Name=YP_405243.1;Note=''catalyzes the formation of dimethylmenaquinone from 1%2C4-dihydroxy-2-naphthoate and octaprenyl diphosphate'';gbkey=CDS;gene=menA;product=1%2C4-dihydroxy-2-naphthoate octaprenyltransferase;protein_id=YP_405243.1;transl_table=11
NC_007606.1	RefSeq	gene	3547424	3547909	.	+	.	ID=gene3735;Dbxref=GeneID:3799873;Name=menG;Note=SDY3808;gbkey=Gene;gene=menG;gene_biotype=protein_coding;locus_tag=SDY_3808
NC_007606.1	RefSeq	CDS	3547424	3547909	.	+	0	ID=cds3306;Parent=gene3735;Dbxref=Genbank:YP_405244.1,GeneID:3799873;Name=YP_405244.1;Note=regulator of RNase E%3B increases half-life and abundance of RNAs%3B interacts with RNase E possibly inhibiting catalytic activity;gbkey=CDS;gene=menG;product=ribonuclease activity regulator protein RraA;protein_id=YP_405244.1;transl_table=11
NC_007606.1	RefSeq	region	3547952	3548715	.	-	.	ID=id577;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3547966	3548361	.	-	.	ID=gene3736;Dbxref=GeneID:3799874;Name=SDY_3809;Note=SDY3809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3809
NC_007606.1	RefSeq	CDS	3547966	3548361	.	-	0	ID=cds3307;Parent=gene3736;Dbxref=Genbank:YP_405245.1,GeneID:3799874;Name=YP_405245.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405245.1;transl_table=11
NC_007606.1	RefSeq	gene	3548388	3548660	.	-	.	ID=gene3737;Dbxref=GeneID:18263154;Name=SDY_4768;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4768
NC_007606.1	RefSeq	CDS	3548388	3548660	.	-	0	ID=cds3308;Parent=gene3737;Dbxref=Genbank:YP_009000840.1,GeneID:18263154;Name=YP_009000840.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000840.1;transl_table=11
NC_007606.1	RefSeq	gene	3548759	3549010	.	+	.	ID=gene3738;Dbxref=GeneID:3799875;Name=SDY_3810;Note=SDY3810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3810
NC_007606.1	RefSeq	CDS	3548759	3549010	.	+	0	ID=cds3309;Parent=gene3738;Dbxref=Genbank:YP_405246.1,GeneID:3799875;Name=YP_405246.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405246.1;transl_table=11
NC_007606.1	RefSeq	region	3549091	3549858	.	+	.	ID=id578;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3549146	3549421	.	+	.	ID=gene3739;Dbxref=GeneID:3799876;Name=insA;Note=SDY3811;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3811
NC_007606.1	RefSeq	CDS	3549146	3549421	.	+	0	ID=cds3310;Parent=gene3739;Dbxref=Genbank:YP_405247.1,GeneID:3799876;Name=YP_405247.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405247.1;transl_table=11
NC_007606.1	RefSeq	gene	3549466	3549843	.	+	.	ID=gene3740;Dbxref=GeneID:3799877;Name=insB;Note=SDY3812;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3812
NC_007606.1	RefSeq	CDS	3549466	3549843	.	+	0	ID=cds3311;Parent=gene3740;Dbxref=Genbank:YP_405248.1,GeneID:3799877;Name=YP_405248.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405248.1;transl_table=11
NC_007606.1	RefSeq	region	3550258	3551521	.	+	.	ID=id579;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3550322	3550624	.	+	.	ID=gene3741;Dbxref=GeneID:3799878;Name=SDY_3813;Note=SDY3813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3813
NC_007606.1	RefSeq	CDS	3550322	3550624	.	+	0	ID=cds3312;Parent=gene3741;Dbxref=Genbank:YP_405249.1,GeneID:3799878;Name=YP_405249.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_405249.1;transl_table=11
NC_007606.1	RefSeq	gene	3550765	3551539	.	+	.	ID=gene3742;Dbxref=GeneID:3799879;Name=SDY_3814;Note=SDY3814;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3814;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	3551506	3551802	.	+	.	ID=gene3743;Dbxref=GeneID:3799880;Name=SDY_3815;Note=SDY3815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3815
NC_007606.1	RefSeq	CDS	3551506	3551802	.	+	0	ID=cds3313;Parent=gene3743;Dbxref=Genbank:YP_405251.1,GeneID:3799880;Name=YP_405251.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405251.1;transl_table=11
NC_007606.1	RefSeq	gene	3551841	3552086	.	-	.	ID=gene3744;Dbxref=GeneID:3799881;Name=yiiU;Note=SDY3816;gbkey=Gene;gene=yiiU;gene_biotype=protein_coding;locus_tag=SDY_3816
NC_007606.1	RefSeq	CDS	3551841	3552086	.	-	0	ID=cds3314;Parent=gene3744;Dbxref=Genbank:YP_405252.1,GeneID:3799881;Name=YP_405252.1;Note=Code: S%3B COG: COG3074;gbkey=CDS;gene=yiiU;product=hypothetical protein;protein_id=YP_405252.1;transl_table=11
NC_007606.1	RefSeq	gene	3552512	3553357	.	+	.	ID=gene3745;Dbxref=GeneID:3799882;Name=glpF;Note=SDY3817;gbkey=Gene;gene=glpF;gene_biotype=protein_coding;locus_tag=SDY_3817
NC_007606.1	RefSeq	CDS	3552512	3553357	.	+	0	ID=cds3315;Parent=gene3745;Dbxref=Genbank:YP_405253.1,GeneID:3799882;Name=YP_405253.1;Note=Code: G%3B COG: COG0580;gbkey=CDS;gene=glpF;product=facilitated diffusion of glycerol;protein_id=YP_405253.1;transl_table=11
NC_007606.1	RefSeq	gene	3553380	3554888	.	+	.	ID=gene3746;Dbxref=GeneID:3799265;Name=glpK;Note=SDY3818;gbkey=Gene;gene=glpK;gene_biotype=protein_coding;locus_tag=SDY_3818
NC_007606.1	RefSeq	CDS	3553380	3554888	.	+	0	ID=cds3316;Parent=gene3746;Dbxref=Genbank:YP_405254.1,GeneID:3799265;Name=YP_405254.1;Note=Converts glycerol and ADP to glycerol-3-phosphate and ADP;gbkey=CDS;gene=glpK;product=glycerol kinase;protein_id=YP_405254.1;transl_table=11
NC_007606.1	RefSeq	gene	3555118	3556128	.	+	.	ID=gene3747;Dbxref=GeneID:3799266;Name=glpX;Note=SDY3819;gbkey=Gene;gene=glpX;gene_biotype=protein_coding;locus_tag=SDY_3819
NC_007606.1	RefSeq	CDS	3555118	3556128	.	+	0	ID=cds3317;Parent=gene3747;Dbxref=Genbank:YP_405255.1,GeneID:3799266;Name=YP_405255.1;Note=''type II fructose 1%2C6-bisphosphatae%3B in Escherichia coli this protein forms a dimer and binds manganese'';gbkey=CDS;gene=glpX;product=fructose 1%2C6-bisphosphatase II;protein_id=YP_405255.1;transl_table=11
NC_007606.1	RefSeq	gene	3556225	3556971	.	+	.	ID=gene3748;Dbxref=GeneID:3799267;Name=fpr;Note=SDY3820;gbkey=Gene;gene=fpr;gene_biotype=protein_coding;locus_tag=SDY_3820
NC_007606.1	RefSeq	CDS	3556225	3556971	.	+	0	ID=cds3318;Parent=gene3748;Dbxref=Genbank:YP_405256.1,GeneID:3799267;Name=YP_405256.1;Note=Code: C%3B COG: COG1018;gbkey=CDS;gene=fpr;product=ferredoxin-NADP reductase;protein_id=YP_405256.1;transl_table=11
NC_007606.1	RefSeq	gene	3556976	3557404	.	-	.	ID=gene3749;Dbxref=GeneID:3799268;Name=yiiT;Note=SDY3821;gbkey=Gene;gene=yiiT;gene_biotype=protein_coding;locus_tag=SDY_3821
NC_007606.1	RefSeq	CDS	3556976	3557404	.	-	0	ID=cds3319;Parent=gene3749;Dbxref=Genbank:YP_405257.1,GeneID:3799268;Name=YP_405257.1;Note=with UspC and Usp E is involved in resistance to UV radiation;gbkey=CDS;gene=yiiT;product=universal stress protein UspD;protein_id=YP_405257.1;transl_table=11
NC_007606.1	RefSeq	gene	3557407	3557730	.	-	.	ID=gene3750;Dbxref=GeneID:3799269;Name=yiiS;Note=SDY3822;gbkey=Gene;gene=yiiS;gene_biotype=protein_coding;locus_tag=SDY_3822
NC_007606.1	RefSeq	CDS	3557407	3557730	.	-	0	ID=cds3320;Parent=gene3750;Dbxref=Genbank:YP_405258.1,GeneID:3799269;Name=YP_405258.1;Note=Code: S%3B COG: COG3691;gbkey=CDS;gene=yiiS;product=hypothetical protein;protein_id=YP_405258.1;transl_table=11
NC_007606.1	RefSeq	region	3557977	3558742	.	-	.	ID=id580;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3557991	3558386	.	-	.	ID=gene3751;Dbxref=GeneID:3799270;Name=SDY_3823;Note=SDY3823;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3823
NC_007606.1	RefSeq	CDS	3557991	3558386	.	-	0	ID=cds3321;Parent=gene3751;Dbxref=Genbank:YP_405259.1,GeneID:3799270;Name=YP_405259.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405259.1;transl_table=11
NC_007606.1	RefSeq	gene	3558413	3558685	.	-	.	ID=gene3752;Dbxref=GeneID:18263155;Name=SDY_4769;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4769
NC_007606.1	RefSeq	CDS	3558413	3558685	.	-	0	ID=cds3322;Parent=gene3752;Dbxref=Genbank:YP_009000841.1,GeneID:18263155;Name=YP_009000841.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000841.1;transl_table=11
NC_007606.1	RefSeq	gene	3558725	3559156	.	-	.	ID=gene3753;Dbxref=GeneID:3799271;Name=yiiR;Note=SDY3824;gbkey=Gene;gene=yiiR;gene_biotype=protein_coding;locus_tag=SDY_3824
NC_007606.1	RefSeq	CDS	3558725	3559156	.	-	0	ID=cds3323;Parent=gene3753;Dbxref=Genbank:YP_405260.1,GeneID:3799271;Name=YP_405260.1;Note=Code: S%3B COG: COG3152;gbkey=CDS;gene=yiiR;product=hypothetical protein;protein_id=YP_405260.1;transl_table=11
NC_007606.1	RefSeq	gene	3559257	3559856	.	+	.	ID=gene3754;Dbxref=GeneID:3799272;Name=yiiQ;Note=SDY3825;gbkey=Gene;gene=yiiQ;gene_biotype=protein_coding;locus_tag=SDY_3825
NC_007606.1	RefSeq	CDS	3559257	3559856	.	+	0	ID=cds3324;Parent=gene3754;Dbxref=Genbank:YP_405261.1,GeneID:3799272;Name=YP_405261.1;gbkey=CDS;gene=yiiQ;product=hypothetical protein;protein_id=YP_405261.1;transl_table=11
NC_007606.1	RefSeq	gene	3559964	3560731	.	+	.	ID=gene3755;Dbxref=GeneID:3799273;Name=tpiA;Note=SDY3826;gbkey=Gene;gene=tpiA;gene_biotype=protein_coding;locus_tag=SDY_3826
NC_007606.1	RefSeq	CDS	3559964	3560731	.	+	0	ID=cds3325;Parent=gene3755;Dbxref=Genbank:YP_405262.1,GeneID:3799273;Name=YP_405262.1;Note=Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate;gbkey=CDS;gene=tpiA;product=triosephosphate isomerase;protein_id=YP_405262.1;transl_table=11
NC_007606.1	RefSeq	gene	3560786	3562318	.	-	.	ID=gene3756;Dbxref=GeneID:3799276;Name=cdh;Note=SDY3829%3B contains IS1 insertion%3B original product: CDP-diacylglycerol phosphotidylhydrolase;gbkey=Gene;gene=cdh;gene_biotype=pseudogene;locus_tag=SDY_3829;pseudo=true
NC_007606.1	RefSeq	region	3561283	3562050	.	-	.	ID=id581;Dbxref=GeneID:3799276;gbkey=mobile_element;gene=cdh
NC_007606.1	RefSeq	gene	3561298	3561675	.	-	.	ID=gene3757;Dbxref=GeneID:3799274;Name=insB;Note=SDY3827;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3827
NC_007606.1	RefSeq	CDS	3561298	3561675	.	-	0	ID=cds3326;Parent=gene3757;Dbxref=Genbank:YP_405263.1,GeneID:3799274;Name=YP_405263.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405263.1;transl_table=11
NC_007606.1	RefSeq	gene	3561720	3561995	.	-	.	ID=gene3758;Dbxref=GeneID:3799275;Name=insA;Note=SDY3828;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3828
NC_007606.1	RefSeq	CDS	3561720	3561995	.	-	0	ID=cds3327;Parent=gene3758;Dbxref=Genbank:YP_405264.1,GeneID:3799275;Name=YP_405264.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405264.1;transl_table=11
NC_007606.1	RefSeq	gene	3562425	3563414	.	-	.	ID=gene3759;Dbxref=GeneID:3799277;Name=sbp;Note=SDY3830;gbkey=Gene;gene=sbp;gene_biotype=protein_coding;locus_tag=SDY_3830
NC_007606.1	RefSeq	CDS	3562425	3563414	.	-	0	ID=cds3328;Parent=gene3759;Dbxref=Genbank:YP_405265.1,GeneID:3799277;Name=YP_405265.1;Note=Code: P%3B COG: COG1613;gbkey=CDS;gene=sbp;product=sulfate transporter subunit;protein_id=YP_405265.1;transl_table=11
NC_007606.1	RefSeq	gene	3563733	3564695	.	-	.	ID=gene3760;Dbxref=GeneID:3799278;Name=pfkA;Note=SDY3831;gbkey=Gene;gene=pfkA;gene_biotype=protein_coding;locus_tag=SDY_3831
NC_007606.1	RefSeq	CDS	3563733	3564695	.	-	0	ID=cds3329;Parent=gene3760;Dbxref=Genbank:YP_405266.1,GeneID:3799278;Name=YP_405266.1;Note=''catalyzes the formation of D-fructose 1%2C6-bisphosphate from D-fructose 6-phosphate in glycolysis'';gbkey=CDS;gene=pfkA;product=6-phosphofructokinase;protein_id=YP_405266.1;transl_table=11
NC_007606.1	RefSeq	gene	3564876	3565778	.	-	.	ID=gene3761;Dbxref=GeneID:3799279;Name=fieF;Note=SDY3832;gbkey=Gene;gene=fieF;gene_biotype=protein_coding;gene_synonym=yiiP;locus_tag=SDY_3832
NC_007606.1	RefSeq	CDS	3564876	3565778	.	-	0	ID=cds3330;Parent=gene3761;Dbxref=Genbank:YP_405267.1,GeneID:3799279;Name=YP_405267.1;Note=''member of cation diffusion facilitator family%3B CDF%3B membrane-bound%3B induced by both zinc and iron%2C but does not induce resistance to zinc%3B can transport zinc(II) in a proton-dependent manner%3B instead this protein induces iron resistance%3B forms dimers'';gbkey=CDS;gene=fieF;product=ferrous iron efflux protein F;protein_id=YP_405267.1;transl_table=11
NC_007606.1	RefSeq	gene	3565926	3566426	.	-	.	ID=gene3762;Dbxref=GeneID:3799280;Name=cpxP;Note=SDY3833;gbkey=Gene;gene=cpxP;gene_biotype=protein_coding;locus_tag=SDY_3833
NC_007606.1	RefSeq	CDS	3565926	3566426	.	-	0	ID=cds3331;Parent=gene3762;Dbxref=Genbank:YP_405268.2,GeneID:3799280;Name=YP_405268.2;Note=repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA%3B CpxP is degraded by DegP protease especially in the presence of misfolded substrates;gbkey=CDS;gene=cpxP;product=repressor CpxP;protein_id=YP_405268.2;transl_table=11
NC_007606.1	RefSeq	gene	3566576	3567274	.	+	.	ID=gene3763;Dbxref=GeneID:3799281;Name=cpxR;Note=SDY3834;gbkey=Gene;gene=cpxR;gene_biotype=protein_coding;locus_tag=SDY_3834
NC_007606.1	RefSeq	CDS	3566576	3567274	.	+	0	ID=cds3332;Parent=gene3763;Dbxref=Genbank:YP_405269.1,GeneID:3799281;Name=YP_405269.1;Note=response regulator in two-component regulatory system with CpxA%3B part of the envelope stress response system;gbkey=CDS;gene=cpxR;product=DNA-binding transcriptional regulator CpxR;protein_id=YP_405269.1;transl_table=11
NC_007606.1	RefSeq	gene	3567271	3568644	.	+	.	ID=gene3764;Dbxref=GeneID:3799282;Name=cpxA;Note=SDY3835;gbkey=Gene;gene=cpxA;gene_biotype=protein_coding;locus_tag=SDY_3835
NC_007606.1	RefSeq	CDS	3567271	3568644	.	+	0	ID=cds3333;Parent=gene3764;Dbxref=Genbank:YP_405270.1,GeneID:3799282;Name=YP_405270.1;Note=part of two-component CpxA/CpxR system%3B senses envelope stress%3B upregulates a number of periplasmic folding and trafficking factors;gbkey=CDS;gene=cpxA;product=two-component sensor protein;protein_id=YP_405270.1;transl_table=11
NC_007606.1	RefSeq	gene	3568712	3569386	.	-	.	ID=gene3765;Dbxref=GeneID:3799283;Name=yiiM;Note=SDY3836;gbkey=Gene;gene=yiiM;gene_biotype=protein_coding;locus_tag=SDY_3836
NC_007606.1	RefSeq	CDS	3568712	3569386	.	-	0	ID=cds3334;Parent=gene3765;Dbxref=Genbank:YP_405271.2,GeneID:3799283;Name=YP_405271.2;Note=Code: S%3B COG: COG2258;gbkey=CDS;gene=yiiM;product=hypothetical protein;protein_id=YP_405271.2;transl_table=11
NC_007606.1	RefSeq	gene	3569535	3570521	.	-	.	ID=gene3766;Dbxref=GeneID:3798466;Name=kdgT;Note=SDY3837;gbkey=Gene;gene=kdgT;gene_biotype=protein_coding;locus_tag=SDY_3837
NC_007606.1	RefSeq	CDS	3569535	3570521	.	-	0	ID=cds3335;Parent=gene3766;Dbxref=Genbank:YP_405272.2,GeneID:3798466;Name=YP_405272.2;Note=transports degraded pectin products into the bacterial cell;gbkey=CDS;gene=kdgT;product=2-keto-3-deoxygluconate permease;protein_id=YP_405272.2;transl_table=11
NC_007606.1	RefSeq	gene	3570781	3571401	.	-	.	ID=gene3767;Dbxref=GeneID:3798467;Name=sodA;Note=SDY3838;gbkey=Gene;gene=sodA;gene_biotype=protein_coding;locus_tag=SDY_3838
NC_007606.1	RefSeq	CDS	3570781	3571401	.	-	0	ID=cds3336;Parent=gene3767;Dbxref=Genbank:YP_405273.1,GeneID:3798467;Name=YP_405273.1;Note=SodA%3B manganese binding%3B only present under aerobic conditions%3B destroys free radicals;gbkey=CDS;gene=sodA;product=superoxide dismutase;protein_id=YP_405273.1;transl_table=11
NC_007606.1	RefSeq	gene	3571686	3572720	.	+	.	ID=gene3768;Dbxref=GeneID:3798468;Name=rhaT;Note=SDY3839;gbkey=Gene;gene=rhaT;gene_biotype=protein_coding;locus_tag=SDY_3839
NC_007606.1	RefSeq	CDS	3571686	3572720	.	+	0	ID=cds3337;Parent=gene3768;Dbxref=Genbank:YP_405274.1,GeneID:3798468;Name=YP_405274.1;Note=transports L-rhamnose and L-lyxose into the cell;gbkey=CDS;gene=rhaT;product=rhamnose-proton symporter;protein_id=YP_405274.1;transl_table=11
NC_007606.1	RefSeq	gene	3572717	3573655	.	-	.	ID=gene3769;Dbxref=GeneID:3798469;Name=rhaR;Note=SDY3840;gbkey=Gene;gene=rhaR;gene_biotype=protein_coding;locus_tag=SDY_3840
NC_007606.1	RefSeq	CDS	3572717	3573655	.	-	0	ID=cds3338;Parent=gene3769;Dbxref=Genbank:YP_405275.1,GeneID:3798469;Name=YP_405275.1;Note=activates the expression of rhaRS in response to L-rhamnose;gbkey=CDS;gene=rhaR;product=transcriptional activator RhaR;protein_id=YP_405275.1;transl_table=11
NC_007606.1	RefSeq	gene	3573639	3574475	.	-	.	ID=gene3770;Dbxref=GeneID:3798470;Name=rhaS;Note=SDY3841;gbkey=Gene;gene=rhaS;gene_biotype=protein_coding;locus_tag=SDY_3841
NC_007606.1	RefSeq	CDS	3573639	3574475	.	-	0	ID=cds3339;Parent=gene3770;Dbxref=Genbank:YP_405276.1,GeneID:3798470;Name=YP_405276.1;Note=activates the expression of the rhaBAD operon and rhaT gene;gbkey=CDS;gene=rhaS;product=transcriptional activator RhaS;protein_id=YP_405276.1;transl_table=11
NC_007606.1	RefSeq	gene	3574763	3575926	.	+	.	ID=gene3771;Dbxref=GeneID:3798471;Name=rhaB;Note=SDY3842;gbkey=Gene;gene=rhaB;gene_biotype=protein_coding;locus_tag=SDY_3842
NC_007606.1	RefSeq	CDS	3574763	3575926	.	+	0	ID=cds3340;Parent=gene3771;Dbxref=Genbank:YP_405277.1,GeneID:3798471;Name=YP_405277.1;Note=Code: G%3B COG: COG1070;gbkey=CDS;gene=rhaB;product=rhamnulokinase;protein_id=YP_405277.1;transl_table=11
NC_007606.1	RefSeq	gene	3575923	3577098	.	+	.	ID=gene3772;Dbxref=GeneID:3798472;Name=rhaA;Note=SDY3843%3B frameshift%3B original product: L-rhamnose isomerase;gbkey=Gene;gene=rhaA;gene_biotype=pseudogene;locus_tag=SDY_3843;pseudo=true
NC_007606.1	RefSeq	gene	3577181	3578005	.	+	.	ID=gene3773;Dbxref=GeneID:3798473;Name=rhaD;Note=SDY3844;gbkey=Gene;gene=rhaD;gene_biotype=protein_coding;locus_tag=SDY_3844
NC_007606.1	RefSeq	CDS	3577181	3578005	.	+	0	ID=cds3341;Parent=gene3773;Dbxref=Genbank:YP_405278.1,GeneID:3798473;Name=YP_405278.1;Note=Code: G%3B COG: COG0235;gbkey=CDS;gene=rhaD;product=rhamnulose-1-phosphate aldolase;protein_id=YP_405278.1;transl_table=11
NC_007606.1	RefSeq	gene	3578015	3578329	.	+	.	ID=gene3774;Dbxref=GeneID:3798474;Name=yiiL;Note=SDY3845;gbkey=Gene;gene=yiiL;gene_biotype=protein_coding;locus_tag=SDY_3845
NC_007606.1	RefSeq	CDS	3578015	3578329	.	+	0	ID=cds3342;Parent=gene3774;Dbxref=Genbank:YP_405279.1,GeneID:3798474;Name=YP_405279.1;Note=Code: S%3B COG: COG3254;gbkey=CDS;gene=yiiL;product=hypothetical protein;protein_id=YP_405279.1;transl_table=11
NC_007606.1	RefSeq	region	3578638	3579403	.	-	.	ID=id582;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3579074	3579346	.	-	.	ID=gene3775;Dbxref=GeneID:18263156;Name=SDY_4770;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4770
NC_007606.1	RefSeq	CDS	3579074	3579346	.	-	0	ID=cds3343;Parent=gene3775;Dbxref=Genbank:YP_009000842.1,GeneID:18263156;Name=YP_009000842.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000842.1;transl_table=11
NC_007606.1	RefSeq	gene	3579404	3580021	.	-	.	ID=gene3776;Dbxref=GeneID:3798476;Name=yiiG;Note=''SDY3847%3B truncated%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yiiG;gene_biotype=pseudogene;locus_tag=SDY_3847;pseudo=true
NC_007606.1	RefSeq	gene	3580174	3581007	.	-	.	ID=gene3777;Dbxref=GeneID:3798477;Name=fdhD;Note=SDY3848;gbkey=Gene;gene=fdhD;gene_biotype=protein_coding;locus_tag=SDY_3848
NC_007606.1	RefSeq	CDS	3580174	3581007	.	-	0	ID=cds3344;Parent=gene3777;Dbxref=Genbank:YP_405281.1,GeneID:3798477;Name=YP_405281.1;Note=involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth;gbkey=CDS;gene=fdhD;product=formate dehydrogenase accessory protein;protein_id=YP_405281.1;transl_table=11
NC_007606.1	RefSeq	gene	3581201	3584251	.	+	.	ID=gene3778;Dbxref=GeneID:3798478;Name=fdoG;Note=SDY3849;gbkey=Gene;gene=fdoG;gene_biotype=protein_coding;locus_tag=SDY_3849
NC_007606.1	RefSeq	CDS	3581201	3584251	.	+	0	ID=cds3345;Parent=gene3778;Dbxref=Genbank:YP_405282.1,GeneID:3798478;Name=YP_405282.1;Note=Code: C%3B COG: COG0243;gbkey=CDS;gene=fdoG;product=formate dehydrogenase-O%2C major subunit;protein_id=YP_405282.1;transl_except=(pos:3581786..3581788%2Caa:Sec);transl_table=11
NC_007606.1	RefSeq	gene	3584264	3585166	.	+	.	ID=gene3779;Dbxref=GeneID:3798479;Name=fdoH;Note=SDY3850;gbkey=Gene;gene=fdoH;gene_biotype=protein_coding;locus_tag=SDY_3850
NC_007606.1	RefSeq	CDS	3584264	3585166	.	+	0	ID=cds3346;Parent=gene3779;Dbxref=Genbank:YP_405283.1,GeneID:3798479;Name=YP_405283.1;Note=Code: C%3B COG: COG0437;gbkey=CDS;gene=fdoH;product=formate dehydrogenase-O%2C iron-sulfur subunit;protein_id=YP_405283.1;transl_table=11
NC_007606.1	RefSeq	gene	3585163	3585798	.	+	.	ID=gene3780;Dbxref=GeneID:3798480;Name=fdoI;Note=SDY3851;gbkey=Gene;gene=fdoI;gene_biotype=protein_coding;locus_tag=SDY_3851
NC_007606.1	RefSeq	CDS	3585163	3585798	.	+	0	ID=cds3347;Parent=gene3780;Dbxref=Genbank:YP_405284.1,GeneID:3798480;Name=YP_405284.1;Note=cytochrome b556(FDO) component%3B heme containing;gbkey=CDS;gene=fdoI;product=formate dehydrogenase-O subunit gamma;protein_id=YP_405284.1;transl_table=11
NC_007606.1	RefSeq	gene	3585795	3586724	.	+	.	ID=gene3781;Dbxref=GeneID:3798481;Name=fdhE;Note=SDY3852;gbkey=Gene;gene=fdhE;gene_biotype=protein_coding;locus_tag=SDY_3852
NC_007606.1	RefSeq	CDS	3585795	3586724	.	+	0	ID=cds3348;Parent=gene3781;Dbxref=Genbank:YP_405285.1,GeneID:3798481;Name=YP_405285.1;Note=required for the formation of active formate dehydrogenase;gbkey=CDS;gene=fdhE;product=formate dehydrogenase accessory protein FdhE;protein_id=YP_405285.1;transl_table=11
NC_007606.1	RefSeq	region	3587029	3587796	.	-	.	ID=id583;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3587044	3587421	.	-	.	ID=gene3782;Dbxref=GeneID:3798482;Name=insB;Note=SDY3853;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3853
NC_007606.1	RefSeq	CDS	3587044	3587421	.	-	0	ID=cds3349;Parent=gene3782;Dbxref=Genbank:YP_405286.1,GeneID:3798482;Name=YP_405286.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405286.1;transl_table=11
NC_007606.1	RefSeq	gene	3587466	3587741	.	-	.	ID=gene3783;Dbxref=GeneID:3798483;Name=insA;Note=SDY3854;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3854
NC_007606.1	RefSeq	CDS	3587466	3587741	.	-	0	ID=cds3350;Parent=gene3783;Dbxref=Genbank:YP_405287.1,GeneID:3798483;Name=YP_405287.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405287.1;transl_table=11
NC_007606.1	RefSeq	gene	3587919	3588908	.	-	.	ID=gene3784;Dbxref=GeneID:3798484;Name=yiiD;Note=SDY3855;gbkey=Gene;gene=yiiD;gene_biotype=protein_coding;locus_tag=SDY_3855
NC_007606.1	RefSeq	CDS	3587919	3588908	.	-	0	ID=cds3351;Parent=gene3784;Dbxref=Genbank:YP_405288.1,GeneID:3798484;Name=YP_405288.1;Note=Code: KR%3B COG: COG0454;gbkey=CDS;gene=yiiD;product=acetyltransferase;protein_id=YP_405288.1;transl_table=11
NC_007606.1	RefSeq	gene	3588905	3589342	.	-	.	ID=gene3785;Dbxref=GeneID:3798485;Name=yihZ;Note=SDY3856;gbkey=Gene;gene=yihZ;gene_biotype=protein_coding;locus_tag=SDY_3856
NC_007606.1	RefSeq	CDS	3588905	3589342	.	-	0	ID=cds3352;Parent=gene3785;Dbxref=Genbank:YP_405289.1,GeneID:3798485;Name=YP_405289.1;Note=hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)%3B possible defense mechanism against a harmful effect of D-tyrosine;gbkey=CDS;gene=yihZ;product=D-tyrosyl-tRNA(Tyr) deacylase;protein_id=YP_405289.1;transl_table=11
NC_007606.1	RefSeq	gene	3589339	3590211	.	-	.	ID=gene3786;Dbxref=GeneID:3797237;Name=rbn;Note=SDY3857;gbkey=Gene;gene=rbn;gene_biotype=protein_coding;locus_tag=SDY_3857
NC_007606.1	RefSeq	CDS	3589339	3590211	.	-	0	ID=cds3353;Parent=gene3786;Dbxref=Genbank:YP_405290.1,GeneID:3797237;Name=YP_405290.1;Note=RNase BN%3B required for 3' maturation of certain phage T4-encoded tRNAs%3B forms a dimer%3B specific for immature tRNA substrates containing incorrect residues within the universal CCA sequence%3B 3' to 5' exoribonuclease;gbkey=CDS;gene=rbn;product=ribonuclease BN;protein_id=YP_405290.1;transl_table=11
NC_007606.1	RefSeq	gene	3590205	3590804	.	-	.	ID=gene3787;Dbxref=GeneID:3797238;Name=yihX;Note=SDY3858;gbkey=Gene;gene=yihX;gene_biotype=protein_coding;locus_tag=SDY_3858
NC_007606.1	RefSeq	CDS	3590205	3590804	.	-	0	ID=cds3354;Parent=gene3787;Dbxref=Genbank:YP_405291.2,GeneID:3797238;Name=YP_405291.2;Note=Code: R%3B COG: COG1011;gbkey=CDS;gene=yihX;product=phosphatase;protein_id=YP_405291.2;transl_table=11
NC_007606.1	RefSeq	gene	3591043	3591973	.	-	.	ID=gene3788;Dbxref=GeneID:3797239;Name=SDY_3859;Note=SDY3859;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_3859;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	3591112	3592280	.	-	.	ID=id584;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	3592280	3593529	.	-	.	ID=id585;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3593155	3593457	.	-	.	ID=gene3789;Dbxref=GeneID:3797242;Name=SDY_3862;Note=SDY3862;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3862
NC_007606.1	RefSeq	CDS	3593155	3593457	.	-	0	ID=cds3355;Parent=gene3789;Dbxref=Genbank:YP_405295.1,GeneID:3797242;Name=YP_405295.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_405295.1;transl_table=11
NC_007606.1	RefSeq	gene	3593621	3594352	.	-	.	ID=gene3790;Dbxref=GeneID:3797243;Name=SDY_3863;Note=SDY3863;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3863
NC_007606.1	RefSeq	CDS	3593621	3594352	.	-	0	ID=cds3356;Parent=gene3790;Dbxref=Genbank:YP_405296.1,GeneID:3797243;Name=YP_405296.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405296.1;transl_table=11
NC_007606.1	RefSeq	region	3594566	3595330	.	+	.	ID=id586;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3594623	3594895	.	+	.	ID=gene3791;Dbxref=GeneID:18263157;Name=SDY_4771;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4771
NC_007606.1	RefSeq	CDS	3594623	3594895	.	+	0	ID=cds3357;Parent=gene3791;Dbxref=Genbank:YP_009000843.1,GeneID:18263157;Name=YP_009000843.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000843.1;transl_table=11
NC_007606.1	RefSeq	gene	3595326	3596030	.	-	.	ID=gene3792;Dbxref=GeneID:3797247;Name=SDY_3867;Note=SDY3867;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3867
NC_007606.1	RefSeq	CDS	3595326	3596030	.	-	0	ID=cds3358;Parent=gene3792;Dbxref=Genbank:YP_405300.1,GeneID:3797247;Name=YP_405300.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;product=shikimate transporter;protein_id=YP_405300.1;transl_table=11
NC_007606.1	RefSeq	region	3596123	3596890	.	+	.	ID=id587;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3596178	3596453	.	+	.	ID=gene3793;Dbxref=GeneID:3797248;Name=insA;Note=SDY3868;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3868
NC_007606.1	RefSeq	CDS	3596178	3596453	.	+	0	ID=cds3359;Parent=gene3793;Dbxref=Genbank:YP_405301.1,GeneID:3797248;Name=YP_405301.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405301.1;transl_table=11
NC_007606.1	RefSeq	gene	3596498	3596875	.	+	.	ID=gene3794;Dbxref=GeneID:3797249;Name=insB;Note=SDY3869;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3869
NC_007606.1	RefSeq	CDS	3596498	3596875	.	+	0	ID=cds3360;Parent=gene3794;Dbxref=Genbank:YP_405302.1,GeneID:3797249;Name=YP_405302.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405302.1;transl_table=11
NC_007606.1	RefSeq	gene	3596888	3597366	.	-	.	ID=gene3795;Dbxref=GeneID:3797250;Name=yihL;Note=SDY3870%3B truncated%3B original product:  transcriptional regulator;gbkey=Gene;gene=yihL;gene_biotype=pseudogene;locus_tag=SDY_3870;pseudo=true
NC_007606.1	RefSeq	region	3597555	3598980	.	-	.	ID=id588;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3597568	3598914	.	-	.	ID=gene3796;Dbxref=GeneID:3797251;Name=SDY_3871;Note=SDY3871;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3871
NC_007606.1	RefSeq	CDS	3597568	3598914	.	-	0	ID=cds3361;Parent=gene3796;Dbxref=Genbank:YP_405303.1,GeneID:3797251;Name=YP_405303.1;Note=Code: L%3B COG: COG3385;gbkey=CDS;product=insertion sequence element IS4 transposase InsG;protein_id=YP_405303.1;transl_table=11
NC_007606.1	RefSeq	gene	3599019	3600842	.	-	.	ID=gene3797;Dbxref=GeneID:3797252;Name=yihK;Note=SDY3872;gbkey=Gene;gene=yihK;gene_biotype=protein_coding;locus_tag=SDY_3872
NC_007606.1	RefSeq	CDS	3599019	3600842	.	-	0	ID=cds3362;Parent=gene3797;Dbxref=Genbank:YP_405304.1,GeneID:3797252;Name=YP_405304.1;Note=Code: T%3B COG: COG1217;gbkey=CDS;gene=yihK;product=GTP-binding protein;protein_id=YP_405304.1;transl_table=11
NC_007606.1	RefSeq	gene	3601215	3602624	.	+	.	ID=gene3798;Dbxref=GeneID:3797253;Name=glnA;Note=SDY3873;gbkey=Gene;gene=glnA;gene_biotype=protein_coding;locus_tag=SDY_3873
NC_007606.1	RefSeq	CDS	3601215	3602624	.	+	0	ID=cds3363;Parent=gene3798;Dbxref=Genbank:YP_405305.1,GeneID:3797253;Name=YP_405305.1;Note=forms a homododecamer%3B forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate%3B also functions in the assimilation of ammonia%3B highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues%3B addition of adenylyl groups results in inactivation of the enzyme;gbkey=CDS;gene=glnA;product=glutamine synthetase;protein_id=YP_405305.1;transl_table=11
NC_007606.1	RefSeq	gene	3602798	3603847	.	+	.	ID=gene3799;Dbxref=GeneID:3797254;Name=glnL;Note=SDY3874;gbkey=Gene;gene=glnL;gene_biotype=protein_coding;locus_tag=SDY_3874
NC_007606.1	RefSeq	CDS	3602798	3603847	.	+	0	ID=cds3364;Parent=gene3799;Dbxref=Genbank:YP_405306.1,GeneID:3797254;Name=YP_405306.1;Note=sensory histidine kinase in two-component regulatory system with GlnG%3B acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation;gbkey=CDS;gene=glnL;product=nitrogen regulation protein NR(II);protein_id=YP_405306.1;transl_table=11
NC_007606.1	RefSeq	gene	3603859	3605268	.	+	.	ID=gene3800;Dbxref=GeneID:3797255;Name=glnG;Note=SDY3875;gbkey=Gene;gene=glnG;gene_biotype=protein_coding;locus_tag=SDY_3875
NC_007606.1	RefSeq	CDS	3603859	3605268	.	+	0	ID=cds3365;Parent=gene3800;Dbxref=Genbank:YP_405307.1,GeneID:3797255;Name=YP_405307.1;Note=response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes%3B interacts with sigma-54;gbkey=CDS;gene=glnG;product=nitrogen regulation protein NR(I);protein_id=YP_405307.1;transl_table=11
NC_007606.1	RefSeq	gene	3605680	3607053	.	-	.	ID=gene3801;Dbxref=GeneID:3796992;Name=hemN;Note=SDY3876;gbkey=Gene;gene=hemN;gene_biotype=protein_coding;locus_tag=SDY_3876
NC_007606.1	RefSeq	CDS	3605680	3607053	.	-	0	ID=cds3366;Parent=gene3801;Dbxref=Genbank:YP_405308.2,GeneID:3796992;Name=YP_405308.2;Note=catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III;gbkey=CDS;gene=hemN;product=coproporphyrinogen III oxidase;protein_id=YP_405308.2;transl_table=11
NC_007606.1	RefSeq	gene	3607242	3607748	.	-	.	ID=gene3802;Dbxref=GeneID:3796993;Name=yihI;Note=SDY3877;gbkey=Gene;gene=yihI;gene_biotype=protein_coding;locus_tag=SDY_3877
NC_007606.1	RefSeq	CDS	3607242	3607748	.	-	0	ID=cds3367;Parent=gene3802;Dbxref=Genbank:YP_405309.1,GeneID:3796993;Name=YP_405309.1;Note=Code: S%3B COG: COG3078;gbkey=CDS;gene=yihI;product=hypothetical protein;protein_id=YP_405309.1;transl_table=11
NC_007606.1	RefSeq	gene	3608330	3608962	.	+	.	ID=gene3803;Dbxref=GeneID:3796994;Name=engB;Note=SDY3878;gbkey=Gene;gene=engB;gene_biotype=protein_coding;gene_synonym=ysxC;locus_tag=SDY_3878
NC_007606.1	RefSeq	CDS	3608330	3608962	.	+	0	ID=cds3368;Parent=gene3803;Dbxref=Genbank:YP_405310.2,GeneID:3796994;Name=YP_405310.2;Note=binds guanine nucleotides%3B in Escherichia coli depletion results in defective cell division and filamentation%3B in Bacillus subtilis this gene is essential;gbkey=CDS;gene=engB;product=ribosome biogenesis GTP-binding protein YsxC;protein_id=YP_405310.2;transl_table=11
NC_007606.1	RefSeq	gene	3609343	3612129	.	-	.	ID=gene3804;Dbxref=GeneID:3796995;Name=polA;Note=SDY3879;gbkey=Gene;gene=polA;gene_biotype=protein_coding;locus_tag=SDY_3879
NC_007606.1	RefSeq	CDS	3609343	3612129	.	-	0	ID=cds3369;Parent=gene3804;Dbxref=Genbank:YP_405311.1,GeneID:3796995;Name=YP_405311.1;Note=''has 3'-5' exonuclease%2C 5'-3' exonuclease and 5'-3'polymerase activities%2C primarily functions to fill gaps during DNA replication and repair'';gbkey=CDS;gene=polA;product=DNA polymerase I;protein_id=YP_405311.1;transl_table=11
NC_007606.1	RefSeq	gene	3612493	3613425	.	+	.	ID=gene3805;Dbxref=GeneID:3796996;Name=yihG;Note=SDY3880;gbkey=Gene;gene=yihG;gene_biotype=protein_coding;locus_tag=SDY_3880
NC_007606.1	RefSeq	CDS	3612493	3613425	.	+	0	ID=cds3370;Parent=gene3805;Dbxref=Genbank:YP_405312.1,GeneID:3796996;Name=YP_405312.1;Note=Code: I%3B COG: COG0204;gbkey=CDS;gene=yihG;product=acyltransferase;protein_id=YP_405312.1;transl_table=11
NC_007606.1	RefSeq	region	3614212	3614976	.	-	.	ID=id589;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3614226	3614441	.	-	.	ID=gene3806;Dbxref=GeneID:3796997;Name=SDY_3881;Note=SDY3881;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3881
NC_007606.1	RefSeq	CDS	3614226	3614441	.	-	0	ID=cds3371;Parent=gene3806;Dbxref=Genbank:YP_405313.1,GeneID:3796997;Name=YP_405313.1;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405313.1;transl_table=11
NC_007606.1	RefSeq	gene	3614647	3614919	.	-	.	ID=gene3807;Dbxref=GeneID:18263158;Name=SDY_4772;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4772
NC_007606.1	RefSeq	CDS	3614647	3614919	.	-	0	ID=cds3372;Parent=gene3807;Dbxref=Genbank:YP_009000844.1,GeneID:18263158;Name=YP_009000844.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000844.1;transl_table=11
NC_007606.1	RefSeq	gene	3614929	3615669	.	-	.	ID=gene3808;Dbxref=GeneID:3796998;Name=yihF;Note=SDY3882%3B contains iso-IS1 insertion%3B original product:  GTP-binding protein;gbkey=Gene;gene=yihF;gene_biotype=pseudogene;locus_tag=SDY_3882;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	3615669	3616436	.	-	.	ID=id590;gbkey=mobile_element;gene=yihF
NC_007606.1	RefSeq	gene	3615684	3616061	.	-	.	ID=gene3809;Dbxref=GeneID:3796999;Name=insB;Note=SDY3883;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3883
NC_007606.1	RefSeq	CDS	3615684	3616061	.	-	0	ID=cds3373;Parent=gene3809;Dbxref=Genbank:YP_405314.1,GeneID:3796999;Name=YP_405314.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405314.1;transl_table=11
NC_007606.1	RefSeq	gene	3616106	3616381	.	-	.	ID=gene3810;Dbxref=GeneID:3797000;Name=insA;Note=SDY3884;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3884
NC_007606.1	RefSeq	CDS	3616106	3616381	.	-	0	ID=cds3374;Parent=gene3810;Dbxref=Genbank:YP_405315.1,GeneID:3797000;Name=YP_405315.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405315.1;transl_table=11
NC_007606.1	RefSeq	gene	3616601	3617227	.	-	.	ID=gene3811;Dbxref=GeneID:3797001;Name=dsbA;Note=SDY3885;gbkey=Gene;gene=dsbA;gene_biotype=protein_coding;locus_tag=SDY_3885
NC_007606.1	RefSeq	CDS	3616601	3617227	.	-	0	ID=cds3375;Parent=gene3811;Dbxref=Genbank:YP_405316.1,GeneID:3797001;Name=YP_405316.1;Note=Code: OC%3B COG: COG0526;gbkey=CDS;gene=dsbA;product=protein disulfide isomerase;protein_id=YP_405316.1;transl_table=11
NC_007606.1	RefSeq	gene	3617244	3618230	.	-	.	ID=gene3812;Dbxref=GeneID:3797002;Name=yihE;Note=SDY3886;gbkey=Gene;gene=yihE;gene_biotype=protein_coding;locus_tag=SDY_3886
NC_007606.1	RefSeq	CDS	3617244	3618230	.	-	0	ID=cds3376;Parent=gene3812;Dbxref=Genbank:YP_405317.1,GeneID:3797002;Name=YP_405317.1;Note=catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro%3B specific substrate in vivo has not been identified yet%3B plays a role in long-term cell survival and expression of surface appendages;gbkey=CDS;gene=yihE;product=serine/threonine protein kinase;protein_id=YP_405317.1;transl_table=11
NC_007606.1	RefSeq	gene	3618307	3618576	.	-	.	ID=gene3813;Dbxref=GeneID:3797003;Name=yihD;Note=SDY3887;gbkey=Gene;gene=yihD;gene_biotype=protein_coding;locus_tag=SDY_3887
NC_007606.1	RefSeq	CDS	3618307	3618576	.	-	0	ID=cds3377;Parent=gene3813;Dbxref=Genbank:YP_405318.1,GeneID:3797003;Name=YP_405318.1;Note=Code: S%3B COG: COG3084;gbkey=CDS;gene=yihD;product=hypothetical protein;protein_id=YP_405318.1;transl_table=11
NC_007606.1	RefSeq	gene	3618646	3619230	.	+	.	ID=gene3814;Dbxref=GeneID:3797004;Name=mobA;Note=SDY3888;gbkey=Gene;gene=mobA;gene_biotype=protein_coding;locus_tag=SDY_3888
NC_007606.1	RefSeq	CDS	3618646	3619230	.	+	0	ID=cds3378;Parent=gene3814;Dbxref=Genbank:YP_405319.1,GeneID:3797004;Name=YP_405319.1;Note=Links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis;gbkey=CDS;gene=mobA;product=molybdopterin-guanine dinucleotide biosynthesis protein A;protein_id=YP_405319.1;transl_table=11
NC_007606.1	RefSeq	gene	3619227	3619739	.	+	.	ID=gene3815;Dbxref=GeneID:3797005;Name=mobB;Note=SDY3889;gbkey=Gene;gene=mobB;gene_biotype=protein_coding;locus_tag=SDY_3889
NC_007606.1	RefSeq	CDS	3619227	3619739	.	+	0	ID=cds3379;Parent=gene3815;Dbxref=Genbank:YP_405320.1,GeneID:3797005;Name=YP_405320.1;Note=Code: H%3B COG: COG1763;gbkey=CDS;gene=mobB;product=molybdopterin-guanine dinucleotide biosynthesis protein B;protein_id=YP_405320.1;transl_table=11
NC_007606.1	RefSeq	gene	3619839	3619957	.	-	.	ID=gene3816;Dbxref=GeneID:3797006;Name=rrfB;Note=SDY3890;gbkey=Gene;gene=rrfB;gene_biotype=rRNA;locus_tag=SDY_3890
NC_007606.1	RefSeq	rRNA	3619839	3619957	.	-	.	ID=rna81;Parent=gene3816;Dbxref=GeneID:3797006;gbkey=rRNA;gene=rrfB;product=5S ribosomal RNA
NC_007606.1	RefSeq	exon	3619839	3619957	.	-	.	ID=id591;Parent=rna81;Dbxref=GeneID:3797006;gbkey=rRNA;gene=rrfB;product=5S ribosomal RNA
NC_007606.1	RefSeq	gene	3620051	3622952	.	-	.	ID=gene3817;Dbxref=GeneID:3797007;Name=rrlB;Note=SDY3891;gbkey=Gene;gene=rrlB;gene_biotype=rRNA;locus_tag=SDY_3891
NC_007606.1	RefSeq	rRNA	3620051	3622952	.	-	.	ID=rna82;Parent=gene3817;Dbxref=GeneID:3797007;gbkey=rRNA;gene=rrlB;product=23S ribosomal RNA
NC_007606.1	RefSeq	exon	3620051	3622952	.	-	.	ID=id592;Parent=rna82;Dbxref=GeneID:3797007;gbkey=rRNA;gene=rrlB;product=23S ribosomal RNA
NC_007606.1	RefSeq	gene	3623127	3623202	.	-	.	ID=gene3818;Dbxref=GeneID:3797008;Name=SDY_3892;Note=SDY3892;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3892
NC_007606.1	RefSeq	tRNA	3623127	3623202	.	-	.	ID=rna83;Parent=gene3818;Dbxref=GeneID:3797008;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_007606.1	RefSeq	exon	3623127	3623202	.	-	.	ID=id593;Parent=rna83;Dbxref=GeneID:3797008;codons=54;gbkey=tRNA;product=tRNA-Ala
NC_007606.1	RefSeq	gene	3623245	3623321	.	-	.	ID=gene3819;Dbxref=GeneID:3797009;Name=SDY_3893;Note=SDY3893;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3893
NC_007606.1	RefSeq	tRNA	3623245	3623321	.	-	.	ID=rna84;Parent=gene3819;Dbxref=GeneID:3797009;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_007606.1	RefSeq	exon	3623245	3623321	.	-	.	ID=id594;Parent=rna84;Dbxref=GeneID:3797009;codons=33;gbkey=tRNA;product=tRNA-Ile
NC_007606.1	RefSeq	gene	3623390	3624931	.	-	.	ID=gene3820;Dbxref=GeneID:3797010;Name=rrsB;Note=SDY3894;gbkey=Gene;gene=rrsB;gene_biotype=rRNA;locus_tag=SDY_3894
NC_007606.1	RefSeq	rRNA	3623390	3624931	.	-	.	ID=rna85;Parent=gene3820;Dbxref=GeneID:3797010;gbkey=rRNA;gene=rrsB;product=16S ribosomal RNA
NC_007606.1	RefSeq	exon	3623390	3624931	.	-	.	ID=id595;Parent=rna85;Dbxref=GeneID:3797010;gbkey=rRNA;gene=rrsB;product=16S ribosomal RNA
NC_007606.1	RefSeq	gene	3625309	3625854	.	-	.	ID=gene3821;Dbxref=GeneID:3797011;Name=hemG;Note=SDY3895;gbkey=Gene;gene=hemG;gene_biotype=protein_coding;locus_tag=SDY_3895
NC_007606.1	RefSeq	CDS	3625309	3625854	.	-	0	ID=cds3380;Parent=gene3821;Dbxref=Genbank:YP_405321.1,GeneID:3797011;Name=YP_405321.1;Note=catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX;gbkey=CDS;gene=hemG;product=protoporphyrinogen oxidase;protein_id=YP_405321.1;transl_table=11
NC_007606.1	RefSeq	gene	3625866	3627317	.	-	.	ID=gene3822;Dbxref=GeneID:3797012;Name=trkH;Note=SDY3896;gbkey=Gene;gene=trkH;gene_biotype=protein_coding;locus_tag=SDY_3896
NC_007606.1	RefSeq	CDS	3625866	3627317	.	-	0	ID=cds3381;Parent=gene3822;Dbxref=Genbank:YP_405322.1,GeneID:3797012;Name=YP_405322.1;Note=Code: P%3B COG: COG0168;gbkey=CDS;gene=trkH;product=potassium transporter;protein_id=YP_405322.1;transl_table=11
NC_007606.1	RefSeq	gene	3627356	3627973	.	-	.	ID=gene3823;Dbxref=GeneID:3797013;Name=yigZ;Note=SDY3897;gbkey=Gene;gene=yigZ;gene_biotype=protein_coding;locus_tag=SDY_3897
NC_007606.1	RefSeq	CDS	3627356	3627973	.	-	0	ID=cds3382;Parent=gene3823;Dbxref=Genbank:YP_405323.1,GeneID:3797013;Name=YP_405323.1;Note=Code: S%3B COG: COG1739;gbkey=CDS;gene=yigZ;product=hypothetical protein;protein_id=YP_405323.1;transl_table=11
NC_007606.1	RefSeq	gene	3627970	3629301	.	-	.	ID=gene3824;Dbxref=GeneID:3797014;Name=pepQ;Note=SDY3898;gbkey=Gene;gene=pepQ;gene_biotype=protein_coding;locus_tag=SDY_3898
NC_007606.1	RefSeq	CDS	3627970	3629301	.	-	0	ID=cds3383;Parent=gene3824;Dbxref=Genbank:YP_405324.1,GeneID:3797014;Name=YP_405324.1;Note=catalyzes the hydrolysis of dipeptides with a proline at the C-terminal%3B also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters;gbkey=CDS;gene=pepQ;product=proline dipeptidase;protein_id=YP_405324.1;transl_table=11
NC_007606.1	RefSeq	gene	3629491	3631680	.	+	.	ID=gene3825;Dbxref=GeneID:3797015;Name=fadB;Note=SDY3899;gbkey=Gene;gene=fadB;gene_biotype=protein_coding;locus_tag=SDY_3899
NC_007606.1	RefSeq	CDS	3629491	3631680	.	+	0	ID=cds3384;Parent=gene3825;Dbxref=Genbank:YP_405325.1,GeneID:3797015;Name=YP_405325.1;Note=''includes enoyl-CoA hydratase%2C delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase%2C 3-hydroxyacyl-CoA dehydrogenase%2C and 3-hydroxybutyryl-CoA epimerase%3B catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA%3B also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities%3B forms a heterotetramer with FadA%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids'';gbkey=CDS;gene=fadB;product=multifunctional fatty acid oxidation complex subunit alpha;protein_id=YP_405325.1;transl_table=11
NC_007606.1	RefSeq	gene	3631690	3632853	.	+	.	ID=gene3826;Dbxref=GeneID:3797016;Name=fadA;Note=SDY3900;gbkey=Gene;gene=fadA;gene_biotype=protein_coding;locus_tag=SDY_3900
NC_007606.1	RefSeq	CDS	3631690	3632853	.	+	0	ID=cds3385;Parent=gene3826;Dbxref=Genbank:YP_405326.1,GeneID:3797016;Name=YP_405326.1;Note=FadA%3B fatty acid oxidation complex component beta%3B functions in a heterotetramer with FadB%3B similar to FadI2J2 complex%3B functions in beta-oxidation of fatty acids;gbkey=CDS;gene=fadA;product=3-ketoacyl-CoA thiolase;protein_id=YP_405326.1;transl_table=11
NC_007606.1	RefSeq	gene	3633046	3633747	.	-	.	ID=gene3827;Dbxref=GeneID:3797017;Name=fre;Note=SDY3901;gbkey=Gene;gene=fre;gene_biotype=protein_coding;gene_synonym=fadI,ubiB;locus_tag=SDY_3901
NC_007606.1	RefSeq	CDS	3633046	3633747	.	-	0	ID=cds3386;Parent=gene3827;Dbxref=Genbank:YP_405327.1,GeneID:3797017;Name=YP_405327.1;Note=NAD(P)H-flavin reductase%3B catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide%3B in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin;gbkey=CDS;gene=fre;product=FMN reductase;protein_id=YP_405327.1;transl_table=11
NC_007606.1	RefSeq	gene	3633793	3635286	.	-	.	ID=gene3828;Dbxref=GeneID:3797018;Name=yigC;Note=SDY3902;gbkey=Gene;gene=yigC;gene_biotype=protein_coding;locus_tag=SDY_3902
NC_007606.1	RefSeq	CDS	3633793	3635286	.	-	0	ID=cds3387;Parent=gene3828;Dbxref=Genbank:YP_405328.1,GeneID:3797018;Name=YP_405328.1;Note=catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol;gbkey=CDS;gene=yigC;product=3-octaprenyl-4-hydroxybenzoate carboxy-lyase;protein_id=YP_405328.1;transl_table=11
NC_007606.1	RefSeq	gene	3635453	3635941	.	+	.	ID=gene3829;Dbxref=GeneID:3797019;Name=rfaH;Note=SDY3903;gbkey=Gene;gene=rfaH;gene_biotype=protein_coding;locus_tag=SDY_3903
NC_007606.1	RefSeq	CDS	3635453	3635941	.	+	0	ID=cds3388;Parent=gene3829;Dbxref=Genbank:YP_405329.1,GeneID:3797019;Name=YP_405329.1;Note=Code: K%3B COG: COG0250;gbkey=CDS;gene=rfaH;product=transcriptional activator RfaH;protein_id=YP_405329.1;transl_table=11
NC_007606.1	RefSeq	gene	3635938	3636731	.	-	.	ID=gene3830;Dbxref=GeneID:3797020;Name=tatD;Note=SDY3904%3B frameshift%3B original product: Mg-dependent DNase;gbkey=Gene;gene=tatD;gene_biotype=pseudogene;locus_tag=SDY_3904;pseudo=true
NC_007606.1	RefSeq	gene	3636761	3637537	.	-	.	ID=gene3831;Dbxref=GeneID:3797021;Name=yigU;Note=SDY3905;gbkey=Gene;gene=yigU;gene_biotype=protein_coding;locus_tag=SDY_3905
NC_007606.1	RefSeq	CDS	3636761	3637537	.	-	0	ID=cds3389;Parent=gene3831;Dbxref=Genbank:YP_405330.1,GeneID:3797021;Name=YP_405330.1;Note=with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane;gbkey=CDS;gene=yigU;product=twin-arginine protein translocation system subunit TatC;protein_id=YP_405330.1;transl_table=11
NC_007606.1	RefSeq	gene	3637540	3638055	.	-	.	ID=gene3832;Dbxref=GeneID:3797022;Name=SDY_3906;Note=SDY3906;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3906
NC_007606.1	RefSeq	CDS	3637540	3638055	.	-	0	ID=cds3390;Parent=gene3832;Dbxref=Genbank:YP_405331.2,GeneID:3797022;Name=YP_405331.2;Note=mediates the export of protein precursors bearing twin-arginine signal peptides;gbkey=CDS;product=sec-independent translocase;protein_id=YP_405331.2;transl_table=11
NC_007606.1	RefSeq	gene	3638059	3638370	.	-	.	ID=gene3833;Dbxref=GeneID:3797023;Name=tatA;Note=SDY3907;gbkey=Gene;gene=tatA;gene_biotype=protein_coding;locus_tag=SDY_3907
NC_007606.1	RefSeq	CDS	3638059	3638370	.	-	0	ID=cds3391;Parent=gene3833;Dbxref=Genbank:YP_405332.1,GeneID:3797023;Name=YP_405332.1;Note=TatA%3B similar to TatE that is found in some proteobacteria%3B part of system that translocates proteins with a conserved twin arginine motif across the inner membrane%3B capable of translocating folded substrates typically those with bound cofactors%3B similar to a protein import system in thylakoid membranes;gbkey=CDS;gene=tatA;product=twin-arginine translocation protein TatA;protein_id=YP_405332.1;transl_table=11
NC_007606.1	RefSeq	gene	3638407	3640047	.	-	.	ID=gene3834;Dbxref=GeneID:3797024;Name=ubiB;Note=SDY3908;gbkey=Gene;gene=ubiB;gene_biotype=protein_coding;gene_synonym=aarF,yigQ,yigR;locus_tag=SDY_3908
NC_007606.1	RefSeq	CDS	3638407	3640047	.	-	0	ID=cds3392;Parent=gene3834;Dbxref=Genbank:YP_405333.1,GeneID:3797024;Name=YP_405333.1;Note=an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone%3B functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis%3B similar to eukaryotic proteins that exhibit kinase functions;gbkey=CDS;gene=ubiB;product=ubiquinone biosynthesis protein UbiB;protein_id=YP_405333.1;transl_table=11
NC_007606.1	RefSeq	gene	3640044	3640649	.	-	.	ID=gene3835;Dbxref=GeneID:3797025;Name=yigP;Note=SDY3909;gbkey=Gene;gene=yigP;gene_biotype=protein_coding;locus_tag=SDY_3909
NC_007606.1	RefSeq	CDS	3640044	3640649	.	-	0	ID=cds3393;Parent=gene3835;Dbxref=Genbank:YP_405334.1,GeneID:3797025;Name=YP_405334.1;Note=Code: S%3B COG: COG3165;gbkey=CDS;gene=yigP;product=hypothetical protein;protein_id=YP_405334.1;transl_table=11
NC_007606.1	RefSeq	gene	3640663	3641418	.	-	.	ID=gene3836;Dbxref=GeneID:3796597;Name=ubiE;Note=SDY3910;gbkey=Gene;gene=ubiE;gene_biotype=protein_coding;locus_tag=SDY_3910
NC_007606.1	RefSeq	CDS	3640663	3641418	.	-	0	ID=cds3394;Parent=gene3836;Dbxref=Genbank:YP_405335.1,GeneID:3796597;Name=YP_405335.1;Note=Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone;gbkey=CDS;gene=ubiE;product=ubiquinone/menaquinone biosynthesis methyltransferase;protein_id=YP_405335.1;transl_table=11
NC_007606.1	RefSeq	gene	3641513	3642940	.	-	.	ID=gene3837;Dbxref=GeneID:3796598;Name=yigN;Note=SDY3911;gbkey=Gene;gene=yigN;gene_biotype=protein_coding;locus_tag=SDY_3911
NC_007606.1	RefSeq	CDS	3641513	3642940	.	-	0	ID=cds3395;Parent=gene3837;Dbxref=Genbank:YP_405336.1,GeneID:3796598;Name=YP_405336.1;Note=YigN%3B nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence%3B transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner;gbkey=CDS;gene=yigN;product=DNA recombination protein RmuC;protein_id=YP_405336.1;transl_table=11
NC_007606.1	RefSeq	gene	3643081	3643842	.	-	.	ID=gene3838;Dbxref=GeneID:3796599;Name=udp;Note=SDY3912;gbkey=Gene;gene=udp;gene_biotype=protein_coding;locus_tag=SDY_3912
NC_007606.1	RefSeq	CDS	3643081	3643842	.	-	0	ID=cds3396;Parent=gene3838;Dbxref=Genbank:YP_405337.1,GeneID:3796599;Name=YP_405337.1;Note=catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate%3B involved in the pyrimidine salvage pathway;gbkey=CDS;gene=udp;product=uridine phosphorylase;protein_id=YP_405337.1;transl_table=11
NC_007606.1	RefSeq	gene	3644050	3644919	.	+	.	ID=gene3839;Dbxref=GeneID:3796600;Name=SDY_3913;Note=SDY3913;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3913
NC_007606.1	RefSeq	CDS	3644050	3644919	.	+	0	ID=cds3397;Parent=gene3839;Dbxref=Genbank:YP_405338.1,GeneID:3796600;Name=YP_405338.1;Note=Code: Q%3B COG: COG0412;gbkey=CDS;product=dienelactone hydrolase;protein_id=YP_405338.1;transl_table=11
NC_007606.1	RefSeq	gene	3644959	3647220	.	-	.	ID=gene3840;Dbxref=GeneID:3796601;Name=metE;Note=SDY3914;gbkey=Gene;gene=metE;gene_biotype=protein_coding;locus_tag=SDY_3914
NC_007606.1	RefSeq	CDS	3644959	3647220	.	-	0	ID=cds3398;Parent=gene3840;Dbxref=Genbank:YP_405339.1,GeneID:3796601;Name=YP_405339.1;Note=catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine;gbkey=CDS;gene=metE;product=5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase;protein_id=YP_405339.1;transl_table=11
NC_007606.1	RefSeq	gene	3647456	3648409	.	+	.	ID=gene3841;Dbxref=GeneID:3796602;Name=metR;Note=SDY3915;gbkey=Gene;gene=metR;gene_biotype=protein_coding;locus_tag=SDY_3915
NC_007606.1	RefSeq	CDS	3647456	3648409	.	+	0	ID=cds3399;Parent=gene3841;Dbxref=Genbank:YP_405340.1,GeneID:3796602;Name=YP_405340.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=metR;product=metE and metH regulator;protein_id=YP_405340.1;transl_table=11
NC_007606.1	RefSeq	gene	3648297	3649196	.	-	.	ID=gene3842;Dbxref=GeneID:3796603;Name=yigM;Note=SDY3916;gbkey=Gene;gene=yigM;gene_biotype=protein_coding;locus_tag=SDY_3916
NC_007606.1	RefSeq	CDS	3648297	3649196	.	-	0	ID=cds3400;Parent=gene3842;Dbxref=Genbank:YP_405341.1,GeneID:3796603;Name=YP_405341.1;Note=Code: GER%3B COG: COG0697;gbkey=CDS;gene=yigM;product=hypothetical protein;protein_id=YP_405341.1;transl_table=11
NC_007606.1	RefSeq	gene	3649272	3650072	.	-	.	ID=gene3843;Dbxref=GeneID:3796604;Name=SDY_3917;Note=SDY3917;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3917
NC_007606.1	RefSeq	CDS	3649272	3650072	.	-	0	ID=cds3401;Parent=gene3843;Dbxref=Genbank:YP_405342.1,GeneID:3796604;Name=YP_405342.1;Note=''purine and pyrimidine nucleotides are secondary substrates%3B yigL expression is regulated by heat shock%2C osmotic shock and starvation of glucose%2C phosphate or ammonium'';gbkey=CDS;product=sugar phosphatase;protein_id=YP_405342.1;transl_table=11
NC_007606.1	RefSeq	gene	3650080	3651102	.	-	.	ID=gene3844;Dbxref=GeneID:3796605;Name=pldB;Note=SDY3918;gbkey=Gene;gene=pldB;gene_biotype=protein_coding;locus_tag=SDY_3918
NC_007606.1	RefSeq	CDS	3650080	3651102	.	-	0	ID=cds3402;Parent=gene3844;Dbxref=Genbank:YP_405343.1,GeneID:3796605;Name=YP_405343.1;Note=lecithinase B%3B catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine%3B can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates;gbkey=CDS;gene=pldB;product=lysophospholipase L2;protein_id=YP_405343.1;transl_table=11
NC_007606.1	RefSeq	gene	3651213	3651833	.	+	.	ID=gene3845;Dbxref=GeneID:3796606;Name=yigK;Note=SDY3919;gbkey=Gene;gene=yigK;gene_biotype=protein_coding;locus_tag=SDY_3919
NC_007606.1	RefSeq	CDS	3651213	3651833	.	+	0	ID=cds3403;Parent=gene3845;Dbxref=Genbank:YP_405344.2,GeneID:3796606;Name=YP_405344.2;Note=Code: E%3B COG: COG1280;gbkey=CDS;gene=yigK;product=hypothetical protein;protein_id=YP_405344.2;transl_table=11
NC_007606.1	RefSeq	gene	3651895	3652515	.	-	.	ID=gene3846;Dbxref=GeneID:3796607;Name=yigJ;Note=SDY3920;gbkey=Gene;gene=yigJ;gene_biotype=protein_coding;locus_tag=SDY_3920
NC_007606.1	RefSeq	CDS	3651895	3652515	.	-	0	ID=cds3404;Parent=gene3846;Dbxref=Genbank:YP_405345.2,GeneID:3796607;Name=YP_405345.2;Note=Code: E%3B COG: COG1280;gbkey=CDS;gene=yigJ;product=hypothetical protein;protein_id=YP_405345.2;transl_table=11
NC_007606.1	RefSeq	gene	3652579	3654414	.	-	.	ID=gene3847;Dbxref=GeneID:3796608;Name=recQ;Note=SDY3921;gbkey=Gene;gene=recQ;gene_biotype=protein_coding;locus_tag=SDY_3921
NC_007606.1	RefSeq	CDS	3652579	3654414	.	-	0	ID=cds3405;Parent=gene3847;Dbxref=Genbank:YP_405346.1,GeneID:3796608;Name=YP_405346.1;Note=''functions in blocking illegitimate recombination%2C enhancing topoisomerase activity%2C initiating SOS signaling and clearing blocked replication forks%3B component of the RecF recombinational pathway'';gbkey=CDS;gene=recQ;product=ATP-dependent DNA helicase RecQ;protein_id=YP_405346.1;transl_table=11
NC_007606.1	RefSeq	gene	3654541	3655410	.	-	.	ID=gene3848;Dbxref=GeneID:3796609;Name=pldA;Note=SDY3922;gbkey=Gene;gene=pldA;gene_biotype=protein_coding;locus_tag=SDY_3922
NC_007606.1	RefSeq	CDS	3654541	3655410	.	-	0	ID=cds3406;Parent=gene3848;Dbxref=Genbank:YP_405347.1,GeneID:3796609;Name=YP_405347.1;Note=catalyzes the hydrolysis of phosphatidylcholine;gbkey=CDS;gene=pldA;product=phospholipase A;protein_id=YP_405347.1;transl_table=11
NC_007606.1	RefSeq	gene	3655575	3656042	.	+	.	ID=gene3849;Dbxref=GeneID:3796610;Name=yigI;Note=SDY3923;gbkey=Gene;gene=yigI;gene_biotype=protein_coding;locus_tag=SDY_3923
NC_007606.1	RefSeq	CDS	3655575	3656042	.	+	0	ID=cds3407;Parent=gene3849;Dbxref=Genbank:YP_405348.2,GeneID:3796610;Name=YP_405348.2;Note=Code: Q%3B COG: COG2050;gbkey=CDS;gene=yigI;product=hypothetical protein;protein_id=YP_405348.2;transl_table=11
NC_007606.1	RefSeq	gene	3656094	3656987	.	+	.	ID=gene3850;Dbxref=GeneID:3796611;Name=rarD;Note=SDY3924;gbkey=Gene;gene=rarD;gene_biotype=protein_coding;locus_tag=SDY_3924
NC_007606.1	RefSeq	CDS	3656094	3656987	.	+	0	ID=cds3408;Parent=gene3850;Dbxref=Genbank:YP_405349.1,GeneID:3796611;Name=YP_405349.1;Note=Code: R%3B COG: COG2962;gbkey=CDS;gene=rarD;product=hypothetical protein;protein_id=YP_405349.1;transl_table=11
NC_007606.1	RefSeq	region	3657052	3657819	.	+	.	ID=id596;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3657107	3657382	.	+	.	ID=gene3851;Dbxref=GeneID:3796612;Name=insA;Note=SDY3925;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3925
NC_007606.1	RefSeq	CDS	3657107	3657382	.	+	0	ID=cds3409;Parent=gene3851;Dbxref=Genbank:YP_405350.1,GeneID:3796612;Name=YP_405350.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405350.1;transl_table=11
NC_007606.1	RefSeq	gene	3657427	3657804	.	+	.	ID=gene3852;Dbxref=GeneID:3796613;Name=insB;Note=SDY3926;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3926
NC_007606.1	RefSeq	CDS	3657427	3657804	.	+	0	ID=cds3410;Parent=gene3852;Dbxref=Genbank:YP_405351.1,GeneID:3796613;Name=YP_405351.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405351.1;transl_table=11
NC_007606.1	RefSeq	region	3658247	3659014	.	-	.	ID=id597;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3658262	3658639	.	-	.	ID=gene3853;Dbxref=GeneID:3796614;Name=insB;Note=SDY3927;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_3927
NC_007606.1	RefSeq	CDS	3658262	3658639	.	-	0	ID=cds3411;Parent=gene3853;Dbxref=Genbank:YP_405352.1,GeneID:3796614;Name=YP_405352.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405352.1;transl_table=11
NC_007606.1	RefSeq	gene	3658684	3658959	.	-	.	ID=gene3854;Dbxref=GeneID:3796615;Name=insA;Note=SDY3928;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_3928
NC_007606.1	RefSeq	CDS	3658684	3658959	.	-	0	ID=cds3412;Parent=gene3854;Dbxref=Genbank:YP_405353.1,GeneID:3796615;Name=YP_405353.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405353.1;transl_table=11
NC_007606.1	RefSeq	gene	3659193	3660143	.	-	.	ID=gene3855;Dbxref=GeneID:3796616;Name=corA;Note=SDY3929;gbkey=Gene;gene=corA;gene_biotype=protein_coding;locus_tag=SDY_3929
NC_007606.1	RefSeq	CDS	3659193	3660143	.	-	0	ID=cds3413;Parent=gene3855;Dbxref=Genbank:YP_405354.1,GeneID:3796616;Name=YP_405354.1;Note=responsible for the influx of magnesium ions;gbkey=CDS;gene=corA;product=magnesium/nickel/cobalt transporter CorA;protein_id=YP_405354.1;transl_table=11
NC_007606.1	RefSeq	gene	3660513	3661277	.	+	.	ID=gene3856;Dbxref=GeneID:3797768;Name=yigE;Note=SDY3930;gbkey=Gene;gene=yigE;gene_biotype=protein_coding;locus_tag=SDY_3930
NC_007606.1	RefSeq	CDS	3660513	3661277	.	+	0	ID=cds3414;Parent=gene3856;Dbxref=Genbank:YP_405355.1,GeneID:3797768;Name=YP_405355.1;Note=Code: S%3B COG: COG3698;gbkey=CDS;gene=yigE;product=hypothetical protein;protein_id=YP_405355.1;transl_table=11
NC_007606.1	RefSeq	gene	3661360	3662262	.	+	.	ID=gene3857;Dbxref=GeneID:3797769;Name=SDY_3931;Note=SDY3931;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3931
NC_007606.1	RefSeq	CDS	3661360	3662262	.	+	0	ID=cds3415;Parent=gene3857;Dbxref=Genbank:YP_405356.1,GeneID:3797769;Name=YP_405356.1;Note=Code: S%3B COG: COG1912;gbkey=CDS;product=hypothetical protein;protein_id=YP_405356.1;transl_table=11
NC_007606.1	RefSeq	gene	3662317	3664479	.	-	.	ID=gene3858;Dbxref=GeneID:3797770;Name=uvrD;Note=SDY3932;gbkey=Gene;gene=uvrD;gene_biotype=protein_coding;locus_tag=SDY_3932
NC_007606.1	RefSeq	CDS	3662317	3664479	.	-	0	ID=cds3416;Parent=gene3858;Dbxref=Genbank:YP_405357.1,GeneID:3797770;Name=YP_405357.1;Note=unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present%3B involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.;gbkey=CDS;gene=uvrD;product=DNA-dependent helicase II;protein_id=YP_405357.1;transl_table=11
NC_007606.1	RefSeq	gene	3664563	3665279	.	-	.	ID=gene3859;Dbxref=GeneID:3797771;Name=yigB;Note=SDY3933;gbkey=Gene;gene=yigB;gene_biotype=protein_coding;locus_tag=SDY_3933
NC_007606.1	RefSeq	CDS	3664563	3665279	.	-	0	ID=cds3417;Parent=gene3859;Dbxref=Genbank:YP_405358.1,GeneID:3797771;Name=YP_405358.1;Note=YigB%3B member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein%3B unknown function;gbkey=CDS;gene=yigB;product=flavin mononucleotide phosphatase;protein_id=YP_405358.1;transl_table=11
NC_007606.1	RefSeq	gene	3665279	3666175	.	-	.	ID=gene3860;Dbxref=GeneID:3797772;Name=xerC;Note=SDY3934;gbkey=Gene;gene=xerC;gene_biotype=protein_coding;locus_tag=SDY_3934
NC_007606.1	RefSeq	CDS	3665279	3666175	.	-	0	ID=cds3418;Parent=gene3860;Dbxref=Genbank:YP_405359.1,GeneID:3797772;Name=YP_405359.1;Note=site-specific tyrosine recombinase which cuts and rejoins DNA molecules%3B binds cooperatively to specific DNA consensus sites%3B forms a heterotetrameric complex with XerC%3B XerCD exhibit similar sequences%3B essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation%3B cell division protein FtsK may regulate the XerCD complex%3B enzyme from Streptococcus group has unusual active site motifs;gbkey=CDS;gene=xerC;product=site-specific tyrosine recombinase XerC;protein_id=YP_405359.1;transl_table=11
NC_007606.1	RefSeq	gene	3666172	3666879	.	-	.	ID=gene3861;Dbxref=GeneID:3797773;Name=yigA;Note=SDY3935;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;locus_tag=SDY_3935
NC_007606.1	RefSeq	CDS	3666172	3666879	.	-	0	ID=cds3419;Parent=gene3861;Dbxref=Genbank:YP_405360.1,GeneID:3797773;Name=YP_405360.1;Note=Code: S%3B COG: COG3159;gbkey=CDS;gene=yigA;product=hypothetical protein;protein_id=YP_405360.1;transl_table=11
NC_007606.1	RefSeq	gene	3666876	3667700	.	-	.	ID=gene3862;Dbxref=GeneID:3797774;Name=dapF;Note=SDY3936;gbkey=Gene;gene=dapF;gene_biotype=protein_coding;locus_tag=SDY_3936
NC_007606.1	RefSeq	CDS	3666876	3667700	.	-	0	ID=cds3420;Parent=gene3862;Dbxref=Genbank:YP_405361.2,GeneID:3797774;Name=YP_405361.2;Note=involved in lysine biosynthesis%3B DAP epimerase%3B produces DL-diaminopimelate from LL-diaminopimelate;gbkey=CDS;gene=dapF;product=diaminopimelate epimerase;protein_id=YP_405361.2;transl_table=11
NC_007606.1	RefSeq	gene	3667737	3667940	.	-	.	ID=gene3863;Dbxref=GeneID:3797775;Name=yifL;Note=SDY3937;gbkey=Gene;gene=yifL;gene_biotype=protein_coding;locus_tag=SDY_3937
NC_007606.1	RefSeq	CDS	3667737	3667940	.	-	0	ID=cds3421;Parent=gene3863;Dbxref=Genbank:YP_405362.1,GeneID:3797775;Name=YP_405362.1;Note=Code: N%3B COG: COG5567;gbkey=CDS;gene=yifL;product=hypothetical protein;protein_id=YP_405362.1;transl_table=11
NC_007606.1	RefSeq	gene	3668127	3668612	.	-	.	ID=gene3864;Dbxref=GeneID:3797777;Name=SDY_3939;Note=SDY3939;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3939
NC_007606.1	RefSeq	CDS	3668127	3668612	.	-	0	ID=cds3422;Parent=gene3864;Dbxref=Genbank:YP_405363.1,GeneID:3797777;Name=YP_405363.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405363.1;transl_table=11
NC_007606.1	RefSeq	gene	3668403	3668723	.	+	.	ID=gene3865;Dbxref=GeneID:3797776;Name=cyaY;Note=SDY3938;gbkey=Gene;gene=cyaY;gene_biotype=protein_coding;locus_tag=SDY_3938
NC_007606.1	RefSeq	CDS	3668403	3668723	.	+	0	ID=cds3423;Parent=gene3865;Dbxref=Genbank:YP_405364.1,GeneID:3797776;Name=YP_405364.1;Note=defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease%3B based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly;gbkey=CDS;gene=cyaY;product=frataxin-like protein;protein_id=YP_405364.1;transl_table=11
NC_007606.1	RefSeq	gene	3668763	3671309	.	-	.	ID=gene3866;Dbxref=GeneID:3797778;Name=cyaA;Note=SDY3940;gbkey=Gene;gene=cyaA;gene_biotype=protein_coding;locus_tag=SDY_3940
NC_007606.1	RefSeq	CDS	3668763	3671309	.	-	0	ID=cds3424;Parent=gene3866;Dbxref=Genbank:YP_405365.1,GeneID:3797778;Name=YP_405365.1;Note=catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP;gbkey=CDS;gene=cyaA;product=adenylate cyclase;protein_id=YP_405365.1;transl_table=11
NC_007606.1	RefSeq	gene	3671675	3672637	.	+	.	ID=gene3867;Dbxref=GeneID:3797779;Name=hemC;Note=SDY3941;gbkey=Gene;gene=hemC;gene_biotype=protein_coding;locus_tag=SDY_3941
NC_007606.1	RefSeq	CDS	3671675	3672637	.	+	0	ID=cds3425;Parent=gene3867;Dbxref=Genbank:YP_405366.1,GeneID:3797779;Name=YP_405366.1;Note=transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis;gbkey=CDS;gene=hemC;product=porphobilinogen deaminase;protein_id=YP_405366.1;transl_table=11
NC_007606.1	RefSeq	gene	3672634	3673374	.	+	.	ID=gene3868;Dbxref=GeneID:3797780;Name=hemD;Note=SDY3942;gbkey=Gene;gene=hemD;gene_biotype=protein_coding;locus_tag=SDY_3942
NC_007606.1	RefSeq	CDS	3672634	3673374	.	+	0	ID=cds3426;Parent=gene3868;Dbxref=Genbank:YP_405367.1,GeneID:3797780;Name=YP_405367.1;Note=catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane%3B functions in tetrapyrrole and heme biosynthesis;gbkey=CDS;gene=hemD;product=uroporphyrinogen-III synthase;protein_id=YP_405367.1;transl_table=11
NC_007606.1	RefSeq	gene	3673396	3674577	.	+	.	ID=gene3869;Dbxref=GeneID:3797781;Name=hemX;Note=SDY3943;gbkey=Gene;gene=hemX;gene_biotype=protein_coding;locus_tag=SDY_3943
NC_007606.1	RefSeq	CDS	3673396	3674577	.	+	0	ID=cds3427;Parent=gene3869;Dbxref=Genbank:YP_405368.1,GeneID:3797781;Name=YP_405368.1;Note=Code: H%3B COG: COG2959;gbkey=CDS;gene=hemX;product=uroporphyrinogen III C-methyltransferase;protein_id=YP_405368.1;transl_table=11
NC_007606.1	RefSeq	gene	3674580	3675776	.	+	.	ID=gene3870;Dbxref=GeneID:3797782;Name=hemY;Note=SDY3944;gbkey=Gene;gene=hemY;gene_biotype=protein_coding;locus_tag=SDY_3944
NC_007606.1	RefSeq	CDS	3674580	3675776	.	+	0	ID=cds3428;Parent=gene3870;Dbxref=Genbank:YP_405369.1,GeneID:3797782;Name=YP_405369.1;Note=Code: H%3B COG: COG3071;gbkey=CDS;gene=hemY;product=protoheme IX biogenesis protein;protein_id=YP_405369.1;transl_table=11
NC_007606.1	RefSeq	gene	3676454	3678109	.	+	.	ID=gene3871;Dbxref=GeneID:3797783;Name=aslA;Note=SDY3945;gbkey=Gene;gene=aslA;gene_biotype=protein_coding;locus_tag=SDY_3945
NC_007606.1	RefSeq	CDS	3676454	3678109	.	+	0	ID=cds3429;Parent=gene3871;Dbxref=Genbank:YP_405370.1,GeneID:3797783;Name=YP_405370.1;Note=Code: P%3B COG: COG3119;gbkey=CDS;gene=aslA;product=arylsulfatase;protein_id=YP_405370.1;transl_table=11
NC_007606.1	RefSeq	gene	3678277	3680286	.	-	.	ID=gene3872;Dbxref=GeneID:3797785;Name=aslB;Note=SDY3947%3B contains iso-IS1 insertion%3B original product:  arylsulfatase regulator;gbkey=Gene;gene=aslB;gene_biotype=pseudogene;locus_tag=SDY_3947;pseudo=true
NC_007606.1	RefSeq	region	3678958	3679723	.	+	.	ID=id598;gbkey=mobile_element;gene=aslB
NC_007606.1	RefSeq	gene	3679015	3679287	.	+	.	ID=gene3873;Dbxref=GeneID:18263159;Name=SDY_4773;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4773
NC_007606.1	RefSeq	CDS	3679015	3679287	.	+	0	ID=cds3430;Parent=gene3873;Dbxref=Genbank:YP_009000845.1,GeneID:18263159;Name=YP_009000845.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000845.1;transl_table=11
NC_007606.1	RefSeq	gene	3679314	3679709	.	+	.	ID=gene3874;Dbxref=GeneID:3797784;Name=SDY_3946;Note=SDY3946;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3946
NC_007606.1	RefSeq	CDS	3679314	3679709	.	+	0	ID=cds3431;Parent=gene3874;Dbxref=Genbank:YP_405371.1,GeneID:3797784;Name=YP_405371.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405371.1;transl_table=11
NC_007606.1	RefSeq	gene	3680433	3680509	.	-	.	ID=gene3875;Dbxref=GeneID:3797786;Name=SDY_3948;Note=SDY3948;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3948
NC_007606.1	RefSeq	tRNA	3680433	3680509	.	-	.	ID=rna86;Parent=gene3875;Dbxref=GeneID:3797786;codons=22;gbkey=tRNA;product=tRNA-Pro
NC_007606.1	RefSeq	exon	3680433	3680509	.	-	.	ID=id599;Parent=rna86;Dbxref=GeneID:3797786;codons=22;gbkey=tRNA;product=tRNA-Pro
NC_007606.1	RefSeq	gene	3680552	3680638	.	-	.	ID=gene3876;Dbxref=GeneID:3797446;Name=SDY_3949;Note=SDY3949;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3949
NC_007606.1	RefSeq	tRNA	3680552	3680638	.	-	.	ID=rna87;Parent=gene3876;Dbxref=GeneID:3797446;codons=19;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	exon	3680552	3680638	.	-	.	ID=id600;Parent=rna87;Dbxref=GeneID:3797446;codons=19;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	gene	3680659	3680734	.	-	.	ID=gene3877;Dbxref=GeneID:3797447;Name=SDY_3950;Note=SDY3950;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3950
NC_007606.1	RefSeq	tRNA	3680659	3680734	.	-	.	ID=rna88;Parent=gene3877;Dbxref=GeneID:3797447;codons=25;gbkey=tRNA;product=tRNA-His
NC_007606.1	RefSeq	exon	3680659	3680734	.	-	.	ID=id601;Parent=rna88;Dbxref=GeneID:3797447;codons=25;gbkey=tRNA;product=tRNA-His
NC_007606.1	RefSeq	gene	3680793	3680869	.	-	.	ID=gene3878;Dbxref=GeneID:3797448;Name=SDY_3951;Note=SDY3951;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3951
NC_007606.1	RefSeq	tRNA	3680793	3680869	.	-	.	ID=rna89;Parent=gene3878;Dbxref=GeneID:3797448;codons=31;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	exon	3680793	3680869	.	-	.	ID=id602;Parent=rna89;Dbxref=GeneID:3797448;codons=31;gbkey=tRNA;product=tRNA-Arg
NC_007606.1	RefSeq	gene	3680972	3682357	.	-	.	ID=gene3879;Dbxref=GeneID:3797449;Name=yifK;Note=SDY3952;gbkey=Gene;gene=yifK;gene_biotype=protein_coding;locus_tag=SDY_3952
NC_007606.1	RefSeq	CDS	3680972	3682357	.	-	0	ID=cds3432;Parent=gene3879;Dbxref=Genbank:YP_405372.1,GeneID:3797449;Name=YP_405372.1;Note=uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters%3B unknown function;gbkey=CDS;gene=yifK;product=transport protein YifK;protein_id=YP_405372.1;transl_table=11
NC_007606.1	RefSeq	gene	3682548	3683288	.	-	.	ID=gene3880;Dbxref=GeneID:3797450;Name=wecG;Note=SDY3953;gbkey=Gene;gene=wecG;gene_biotype=protein_coding;locus_tag=SDY_3953
NC_007606.1	RefSeq	CDS	3682548	3683288	.	-	0	ID=cds3433;Parent=gene3880;Dbxref=Genbank:YP_405373.1,GeneID:3797450;Name=YP_405373.1;Note=Code: M%3B COG: COG1922;gbkey=CDS;gene=wecG;product=UDP-N-acetyl-D-mannosaminuronic acid transferase;protein_id=YP_405373.1;transl_table=11
NC_007606.1	RefSeq	gene	3683291	3684643	.	-	.	ID=gene3881;Dbxref=GeneID:3797451;Name=wecF;Note=SDY3954;gbkey=Gene;gene=wecF;gene_biotype=protein_coding;locus_tag=SDY_3954
NC_007606.1	RefSeq	CDS	3683291	3684643	.	-	0	ID=cds3434;Parent=gene3881;Dbxref=Genbank:YP_405374.1,GeneID:3797451;Name=YP_405374.1;Note=enterobacterial common antigen polymerase;gbkey=CDS;gene=wecF;product=common antigen polymerase;protein_id=YP_405374.1;transl_table=11
NC_007606.1	RefSeq	gene	3684640	3685719	.	-	.	ID=gene3882;Dbxref=GeneID:3797452;Name=yifM;Note=SDY3955;gbkey=Gene;gene=yifM;gene_biotype=protein_coding;locus_tag=SDY_3955
NC_007606.1	RefSeq	CDS	3684640	3685719	.	-	0	ID=cds3435;Parent=gene3882;Dbxref=Genbank:YP_405375.1,GeneID:3797452;Name=YP_405375.1;Note=catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis;gbkey=CDS;gene=yifM;product=4-alpha-L-fucosyltransferase;protein_id=YP_405375.1;transl_table=11
NC_007606.1	RefSeq	gene	3685716	3686966	.	-	.	ID=gene3883;Dbxref=GeneID:3797453;Name=wzxE;Note=SDY3956;gbkey=Gene;gene=wzxE;gene_biotype=protein_coding;locus_tag=SDY_3956
NC_007606.1	RefSeq	CDS	3685716	3686966	.	-	0	ID=cds3436;Parent=gene3883;Dbxref=Genbank:YP_405376.1,GeneID:3797453;Name=YP_405376.1;Note=Code: R%3B COG: COG2244;gbkey=CDS;gene=wzxE;product=cytochrome;protein_id=YP_405376.1;transl_table=11
NC_007606.1	RefSeq	gene	3686968	3688098	.	-	.	ID=gene3884;Dbxref=GeneID:3797454;Name=wecE;Note=SDY3957;gbkey=Gene;gene=wecE;gene_biotype=protein_coding;locus_tag=SDY_3957
NC_007606.1	RefSeq	CDS	3686968	3688098	.	-	0	ID=cds3437;Parent=gene3884;Dbxref=Genbank:YP_405377.1,GeneID:3797454;Name=YP_405377.1;Note=catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis;gbkey=CDS;gene=wecE;product=TDP-4-oxo-6-deoxy-D-glucose transaminase;protein_id=YP_405377.1;transl_table=11
NC_007606.1	RefSeq	gene	3688103	3688648	.	-	.	ID=gene3885;Dbxref=GeneID:3797455;Name=wecD;Note=SDY3958;gbkey=Gene;gene=wecD;gene_biotype=protein_coding;locus_tag=SDY_3958
NC_007606.1	RefSeq	CDS	3688103	3688648	.	-	0	ID=cds3438;Parent=gene3885;Dbxref=Genbank:YP_405378.1,GeneID:3797455;Name=YP_405378.1;Note=Code: KR%3B COG: COG0454;gbkey=CDS;gene=wecD;product=TDP-fucosamine acetyltransferase;protein_id=YP_405378.1;transl_table=11
NC_007606.1	RefSeq	gene	3688755	3689636	.	-	.	ID=gene3886;Dbxref=GeneID:3797456;Name=rffH;Note=SDY3959;gbkey=Gene;gene=rffH;gene_biotype=protein_coding;locus_tag=SDY_3959
NC_007606.1	RefSeq	CDS	3688755	3689636	.	-	0	ID=cds3439;Parent=gene3886;Dbxref=Genbank:YP_405379.1,GeneID:3797456;Name=YP_405379.1;Note=Code: M%3B COG: COG1209;gbkey=CDS;gene=rffH;product=glucose-1-phosphate thymidylyltransferase;protein_id=YP_405379.1;transl_table=11
NC_007606.1	RefSeq	gene	3689655	3690630	.	-	.	ID=gene3887;Dbxref=GeneID:3797457;Name=rffG;Note=''SDY3960%3B frameshift%3B original product: dTDP-glucose 4%2C6-dehydratase'';gbkey=Gene;gene=rffG;gene_biotype=pseudogene;locus_tag=SDY_3960;pseudo=true
NC_007606.1	RefSeq	gene	3690630	3691892	.	-	.	ID=gene3888;Dbxref=GeneID:3797458;Name=wecC;Note=SDY3961;gbkey=Gene;gene=wecC;gene_biotype=protein_coding;locus_tag=SDY_3961
NC_007606.1	RefSeq	CDS	3690630	3691892	.	-	0	ID=cds3440;Parent=gene3888;Dbxref=Genbank:YP_405380.1,GeneID:3797458;Name=YP_405380.1;Note=catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid;gbkey=CDS;gene=wecC;product=UDP-N-acetyl-D-mannosamine dehydrogenase;protein_id=YP_405380.1;transl_table=11
NC_007606.1	RefSeq	gene	3691889	3693061	.	-	.	ID=gene3889;Dbxref=GeneID:3797459;Name=wecB;Note=SDY3962;gbkey=Gene;gene=wecB;gene_biotype=protein_coding;locus_tag=SDY_3962
NC_007606.1	RefSeq	CDS	3691889	3693061	.	-	0	ID=cds3441;Parent=gene3889;Dbxref=Genbank:YP_405381.1,GeneID:3797459;Name=YP_405381.1;Note=Code: M%3B COG: COG0381;gbkey=CDS;gene=wecB;product=UDP-N-acetyl glucosamine -2-epimerase;protein_id=YP_405381.1;transl_table=11
NC_007606.1	RefSeq	gene	3693075	3694124	.	-	.	ID=gene3890;Dbxref=GeneID:3797460;Name=wzzE;Note=SDY3963;gbkey=Gene;gene=wzzE;gene_biotype=protein_coding;locus_tag=SDY_3963
NC_007606.1	RefSeq	CDS	3693075	3694124	.	-	0	ID=cds3442;Parent=gene3890;Dbxref=Genbank:YP_405382.1,GeneID:3797460;Name=YP_405382.1;Note=Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein;gbkey=CDS;gene=wzzE;product=lipopolysaccharide biosynthesis protein WzzE;protein_id=YP_405382.1;transl_table=11
NC_007606.1	RefSeq	gene	3694133	3695236	.	-	.	ID=gene3891;Dbxref=GeneID:3797709;Name=rfe;Note=SDY3964;gbkey=Gene;gene=rfe;gene_biotype=protein_coding;locus_tag=SDY_3964
NC_007606.1	RefSeq	CDS	3694133	3695236	.	-	0	ID=cds3443;Parent=gene3891;Dbxref=Genbank:YP_405383.1,GeneID:3797709;Name=YP_405383.1;Note=Code: M%3B COG: COG0472;gbkey=CDS;gene=rfe;product=UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase;protein_id=YP_405383.1;transl_table=11
NC_007606.1	RefSeq	gene	3695248	3695466	.	-	.	ID=gene3892;Dbxref=GeneID:3797710;Name=SDY_3965;Note=SDY3965;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3965
NC_007606.1	RefSeq	CDS	3695248	3695466	.	-	0	ID=cds3444;Parent=gene3892;Dbxref=Genbank:YP_405384.1,GeneID:3797710;Name=YP_405384.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405384.1;transl_table=11
NC_007606.1	RefSeq	gene	3695476	3696735	.	-	.	ID=gene3893;Dbxref=GeneID:3797711;Name=rho;Note=SDY3966;gbkey=Gene;gene=rho;gene_biotype=protein_coding;locus_tag=SDY_3966
NC_007606.1	RefSeq	CDS	3695476	3696735	.	-	0	ID=cds3445;Parent=gene3893;Dbxref=Genbank:YP_405385.1,GeneID:3797711;Name=YP_405385.1;Note=An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes;gbkey=CDS;gene=rho;product=transcription termination factor Rho;protein_id=YP_405385.1;transl_table=11
NC_007606.1	RefSeq	gene	3696820	3696921	.	-	.	ID=gene3894;Dbxref=GeneID:3797712;Name=rhoL;Note=SDY3967;gbkey=Gene;gene=rhoL;gene_biotype=protein_coding;locus_tag=SDY_3967
NC_007606.1	RefSeq	CDS	3696820	3696921	.	-	0	ID=cds3446;Parent=gene3894;Dbxref=Genbank:YP_405386.1,GeneID:3797712;Name=YP_405386.1;gbkey=CDS;gene=rhoL;product=rho operon leader peptide;protein_id=YP_405386.1;transl_table=11
NC_007606.1	RefSeq	gene	3697062	3697445	.	-	.	ID=gene3895;Dbxref=GeneID:3797713;Name=trxA;Note=SDY3968;gbkey=Gene;gene=trxA;gene_biotype=protein_coding;locus_tag=SDY_3968
NC_007606.1	RefSeq	CDS	3697062	3697445	.	-	0	ID=cds3447;Parent=gene3895;Dbxref=Genbank:YP_405387.1,GeneID:3797713;Name=YP_405387.1;Note=Code: OC%3B COG: COG0526;gbkey=CDS;gene=trxA;product=thioredoxin;protein_id=YP_405387.1;transl_table=11
NC_007606.1	RefSeq	gene	3697522	3698787	.	+	.	ID=gene3896;Dbxref=GeneID:3797714;Name=rhlB;Note=SDY3969;gbkey=Gene;gene=rhlB;gene_biotype=protein_coding;locus_tag=SDY_3969
NC_007606.1	RefSeq	CDS	3697522	3698787	.	+	0	ID=cds3448;Parent=gene3896;Dbxref=Genbank:YP_405388.1,GeneID:3797714;Name=YP_405388.1;Note=''enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome%2C a multi-enzyme complex important in RNA processing and messenger RNA degradation'';gbkey=CDS;gene=rhlB;product=ATP-dependent RNA helicase RhlB;protein_id=YP_405388.1;transl_table=11
NC_007606.1	RefSeq	gene	3698921	3700405	.	+	.	ID=gene3897;Dbxref=GeneID:3797715;Name=gppA;Note=SDY3970;gbkey=Gene;gene=gppA;gene_biotype=protein_coding;locus_tag=SDY_3970
NC_007606.1	RefSeq	CDS	3698921	3700405	.	+	0	ID=cds3449;Parent=gene3897;Dbxref=Genbank:YP_405389.1,GeneID:3797715;Name=YP_405389.1;Note=''catalyzes the conversion of guanosine 5'-triphosphate%2C3'-diphosphate (pppGpp) to guanosine 5'-diphosphate%2C3'-diphosphate (ppGpp)%3B pppGpp and ppGpp control the stringent response during amino acid starvation'';gbkey=CDS;gene=gppA;product=guanosine pentaphosphate phosphohydrolase;protein_id=YP_405389.1;transl_table=11
NC_007606.1	RefSeq	gene	3700452	3702473	.	-	.	ID=gene3898;Dbxref=GeneID:3797716;Name=rep;Note=SDY3971;gbkey=Gene;gene=rep;gene_biotype=protein_coding;locus_tag=SDY_3971
NC_007606.1	RefSeq	CDS	3700452	3702473	.	-	0	ID=cds3450;Parent=gene3898;Dbxref=Genbank:YP_405390.1,GeneID:3797716;Name=YP_405390.1;Note=single-stranded DNA-dependent ATPase%3B initiates unwinding at a nick in the DNA%3B involved in DNA replication;gbkey=CDS;gene=rep;product=ATP-dependent DNA helicase Rep;protein_id=YP_405390.1;transl_table=11
NC_007606.1	RefSeq	region	3702838	3704169	.	+	.	ID=id603;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3703253	3704158	.	+	.	ID=gene3899;Dbxref=GeneID:3797717;Name=SDY_3972;Note=SDY3972;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3972
NC_007606.1	RefSeq	CDS	3703253	3704158	.	+	0	ID=cds3451;Parent=gene3899;Dbxref=Genbank:YP_405391.2,GeneID:3797717;Name=YP_405391.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_405391.2;transl_table=11
NC_007606.1	RefSeq	gene	3704165	3704476	.	+	.	ID=gene3900;Dbxref=GeneID:18263160;Name=SDY_3972a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3972a
NC_007606.1	RefSeq	CDS	3704165	3704476	.	+	0	ID=cds3452;Parent=gene3900;Dbxref=Genbank:YP_009000846.1,GeneID:18263160;Name=YP_009000846.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_009000846.1;transl_table=11
NC_007606.1	RefSeq	gene	3704675	3704956	.	+	.	ID=gene3901;Dbxref=GeneID:3797718;Name=ppiC;Note=SDY3973;gbkey=Gene;gene=ppiC;gene_biotype=protein_coding;locus_tag=SDY_3973
NC_007606.1	RefSeq	CDS	3704675	3704956	.	+	0	ID=cds3453;Parent=gene3901;Dbxref=Genbank:YP_405392.1,GeneID:3797718;Name=YP_405392.1;Note=Code: O%3B COG: COG0760;gbkey=CDS;gene=ppiC;product=peptidyl-prolyl cis-trans isomerase C;protein_id=YP_405392.1;transl_table=11
NC_007606.1	RefSeq	gene	3705002	3706477	.	-	.	ID=gene3902;Dbxref=GeneID:3797719;Name=ilvC;Note=SDY3974;gbkey=Gene;gene=ilvC;gene_biotype=protein_coding;locus_tag=SDY_3974
NC_007606.1	RefSeq	CDS	3705002	3706477	.	-	0	ID=cds3454;Parent=gene3902;Dbxref=Genbank:YP_405393.1,GeneID:3797719;Name=YP_405393.1;Note=''catalyzes the formation of (R)-2%2C3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis'';gbkey=CDS;gene=ilvC;product=ketol-acid reductoisomerase;protein_id=YP_405393.1;transl_table=11
NC_007606.1	RefSeq	gene	3706627	3707517	.	+	.	ID=gene3903;Dbxref=GeneID:3797720;Name=ilvY;Note=SDY3975;gbkey=Gene;gene=ilvY;gene_biotype=protein_coding;locus_tag=SDY_3975
NC_007606.1	RefSeq	CDS	3706627	3707517	.	+	0	ID=cds3455;Parent=gene3903;Dbxref=Genbank:YP_405394.2,GeneID:3797720;Name=YP_405394.2;Note=participates in controlling several genes involved in isoleucine and valine biosynthesis%3B activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate;gbkey=CDS;gene=ilvY;product=DNA-binding transcriptional regulator IlvY;protein_id=YP_405394.2;transl_table=11
NC_007606.1	RefSeq	gene	3707514	3709058	.	-	.	ID=gene3904;Dbxref=GeneID:3797721;Name=ilvA;Note=SDY3976;gbkey=Gene;gene=ilvA;gene_biotype=protein_coding;locus_tag=SDY_3976
NC_007606.1	RefSeq	CDS	3707514	3709058	.	-	0	ID=cds3456;Parent=gene3904;Dbxref=Genbank:YP_405395.1,GeneID:3797721;Name=YP_405395.1;Note=''threonine deaminase%3B threonine dehydratase%3B in Escherichia coli%2C IlvA is part of the isoleucine biosynthetic pathway'';gbkey=CDS;gene=ilvA;product=threonine dehydratase;protein_id=YP_405395.1;transl_table=11
NC_007606.1	RefSeq	gene	3709061	3710911	.	-	.	ID=gene3905;Dbxref=GeneID:3797722;Name=ilvD;Note=SDY3977;gbkey=Gene;gene=ilvD;gene_biotype=protein_coding;locus_tag=SDY_3977
NC_007606.1	RefSeq	CDS	3709061	3710911	.	-	0	ID=cds3457;Parent=gene3905;Dbxref=Genbank:YP_405396.1,GeneID:3797722;Name=YP_405396.1;Note=''catalyzes the dehydration of 2%2C3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis'';gbkey=CDS;gene=ilvD;product=dihydroxy-acid dehydratase;protein_id=YP_405396.1;transl_table=11
NC_007606.1	RefSeq	gene	3710976	3711905	.	-	.	ID=gene3906;Dbxref=GeneID:3797723;Name=ilvE;Note=SDY3978;gbkey=Gene;gene=ilvE;gene_biotype=protein_coding;locus_tag=SDY_3978
NC_007606.1	RefSeq	CDS	3710976	3711905	.	-	0	ID=cds3458;Parent=gene3906;Dbxref=Genbank:YP_405397.1,GeneID:3797723;Name=YP_405397.1;Note=catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids;gbkey=CDS;gene=ilvE;product=branched-chain amino acid aminotransferase;protein_id=YP_405397.1;transl_table=11
NC_007606.1	RefSeq	gene	3711925	3712188	.	-	.	ID=gene3907;Dbxref=GeneID:3797724;Name=ilvM;Note=SDY3979;gbkey=Gene;gene=ilvM;gene_biotype=protein_coding;locus_tag=SDY_3979
NC_007606.1	RefSeq	CDS	3711925	3712188	.	-	0	ID=cds3459;Parent=gene3907;Dbxref=Genbank:YP_405398.1,GeneID:3797724;Name=YP_405398.1;Note=Code: S%3B COG: COG3978;gbkey=CDS;gene=ilvM;product=acetolactate synthase 2 regulatory subunit;protein_id=YP_405398.1;transl_table=11
NC_007606.1	RefSeq	gene	3712185	3713831	.	-	.	ID=gene3908;Dbxref=GeneID:3797725;Name=ilvG;Note=SDY3980;gbkey=Gene;gene=ilvG;gene_biotype=protein_coding;locus_tag=SDY_3980
NC_007606.1	RefSeq	CDS	3712185	3713831	.	-	0	ID=cds3460;Parent=gene3908;Dbxref=Genbank:YP_405399.1,GeneID:3797725;Name=YP_405399.1;Note=catalyzes the formation of 2-acetolactate from pyruvate%3B also known as acetolactate synthase large subunit;gbkey=CDS;gene=ilvG;product=acetolactate synthase 2 catalytic subunit;protein_id=YP_405399.1;transl_table=11
NC_007606.1	RefSeq	gene	3713971	3714069	.	-	.	ID=gene3909;Dbxref=GeneID:3797726;Name=ilvL;Note=SDY3981;gbkey=Gene;gene=ilvL;gene_biotype=protein_coding;locus_tag=SDY_3981
NC_007606.1	RefSeq	CDS	3713971	3714069	.	-	0	ID=cds3461;Parent=gene3909;Dbxref=Genbank:YP_405400.1,GeneID:3797726;Name=YP_405400.1;gbkey=CDS;gene=ilvL;product=ilvG operon leader peptide;protein_id=YP_405400.1;transl_table=11
NC_007606.1	RefSeq	gene	3714392	3717379	.	+	.	ID=gene3910;Dbxref=GeneID:3797727;Name=yifB;Note=SDY3982%3B contains ISSfl2 insertion%3B original product:  2-component regulator;gbkey=Gene;gene=yifB;gene_biotype=pseudogene;locus_tag=SDY_3982;pseudo=true
NC_007606.1	RefSeq	region	3715656	3717028	.	-	.	ID=id604;gbkey=mobile_element;gene=yifB
NC_007606.1	RefSeq	gene	3715802	3716998	.	+	.	ID=gene3911;Dbxref=GeneID:3797728;Name=SDY_3983;Note=SDY3983;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3983
NC_007606.1	RefSeq	CDS	3715802	3716998	.	+	0	ID=cds3462;Parent=gene3911;Dbxref=Genbank:YP_405401.1,GeneID:3797728;Name=YP_405401.1;Note=Code: L%3B COG: COG3547;gbkey=CDS;product=insertion element IS110 transposase;protein_id=YP_405401.1;transl_table=11
NC_007606.1	RefSeq	gene	3717404	3717742	.	-	.	ID=gene3912;Dbxref=GeneID:3798008;Name=yifE;Note=SDY3984;gbkey=Gene;gene=yifE;gene_biotype=protein_coding;locus_tag=SDY_3984
NC_007606.1	RefSeq	CDS	3717404	3717742	.	-	0	ID=cds3463;Parent=gene3912;Dbxref=Genbank:YP_405402.1,GeneID:3798008;Name=YP_405402.1;Note=Code: S%3B COG: COG3085;gbkey=CDS;gene=yifE;product=hypothetical protein;protein_id=YP_405402.1;transl_table=11
NC_007606.1	RefSeq	gene	3717861	3718700	.	+	.	ID=gene3913;Dbxref=GeneID:3798009;Name=yifDA;Note=SDY3985;gbkey=Gene;gene=yifDA;gene_biotype=protein_coding;locus_tag=SDY_3985
NC_007606.1	RefSeq	CDS	3717861	3718700	.	+	0	ID=cds3464;Parent=gene3913;Dbxref=Genbank:YP_405403.1,GeneID:3798009;Name=YP_405403.1;Note=Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon;gbkey=CDS;gene=yifDA;product=transcriptional regulator HdfR;protein_id=YP_405403.1;transl_table=11
NC_007606.1	RefSeq	gene	3718795	3718870	.	-	.	ID=gene3914;Dbxref=GeneID:3798010;Name=SDY_3986;Note=SDY3986;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3986
NC_007606.1	RefSeq	tRNA	3718795	3718870	.	-	.	ID=rna90;Parent=gene3914;Dbxref=GeneID:3798010;codons=15;gbkey=tRNA;product=tRNA-Trp
NC_007606.1	RefSeq	exon	3718795	3718870	.	-	.	ID=id605;Parent=rna90;Dbxref=GeneID:3798010;codons=15;gbkey=tRNA;product=tRNA-Trp
NC_007606.1	RefSeq	gene	3718879	3718955	.	-	.	ID=gene3915;Dbxref=GeneID:3798011;Name=SDY_3987;Note=SDY3987;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3987
NC_007606.1	RefSeq	tRNA	3718879	3718955	.	-	.	ID=rna91;Parent=gene3915;Dbxref=GeneID:3798011;codons=57;gbkey=tRNA;product=tRNA-Asp
NC_007606.1	RefSeq	exon	3718879	3718955	.	-	.	ID=id606;Parent=rna91;Dbxref=GeneID:3798011;codons=57;gbkey=tRNA;product=tRNA-Asp
NC_007606.1	RefSeq	gene	3719008	3719126	.	-	.	ID=gene3916;Dbxref=GeneID:3798012;Name=rrfE;Note=SDY3988;gbkey=Gene;gene=rrfE;gene_biotype=rRNA;locus_tag=SDY_3988
NC_007606.1	RefSeq	rRNA	3719008	3719126	.	-	.	ID=rna92;Parent=gene3916;Dbxref=GeneID:3798012;gbkey=rRNA;gene=rrfE;product=5S ribosomal RNA
NC_007606.1	RefSeq	exon	3719008	3719126	.	-	.	ID=id607;Parent=rna92;Dbxref=GeneID:3798012;gbkey=rRNA;gene=rrfE;product=5S ribosomal RNA
NC_007606.1	RefSeq	gene	3719220	3722121	.	-	.	ID=gene3917;Dbxref=GeneID:3798013;Name=rrlE;Note=SDY3989;gbkey=Gene;gene=rrlE;gene_biotype=rRNA;locus_tag=SDY_3989
NC_007606.1	RefSeq	rRNA	3719220	3722121	.	-	.	ID=rna93;Parent=gene3917;Dbxref=GeneID:3798013;gbkey=rRNA;gene=rrlE;product=23S ribosomal RNA
NC_007606.1	RefSeq	exon	3719220	3722121	.	-	.	ID=id608;Parent=rna93;Dbxref=GeneID:3798013;gbkey=rRNA;gene=rrlE;product=23S ribosomal RNA
NC_007606.1	RefSeq	gene	3722306	3722381	.	-	.	ID=gene3918;Dbxref=GeneID:3798014;Name=SDY_3990;Note=SDY3990;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_3990
NC_007606.1	RefSeq	tRNA	3722306	3722381	.	-	.	ID=rna94;Parent=gene3918;Dbxref=GeneID:3798014;codons=58;gbkey=tRNA;product=tRNA-Glu
NC_007606.1	RefSeq	exon	3722306	3722381	.	-	.	ID=id609;Parent=rna94;Dbxref=GeneID:3798014;codons=58;gbkey=tRNA;product=tRNA-Glu
NC_007606.1	RefSeq	gene	3722468	3724009	.	-	.	ID=gene3919;Dbxref=GeneID:3798015;Name=rrsE;Note=SDY3991;gbkey=Gene;gene=rrsE;gene_biotype=rRNA;locus_tag=SDY_3991
NC_007606.1	RefSeq	rRNA	3722468	3724009	.	-	.	ID=rna95;Parent=gene3919;Dbxref=GeneID:3798015;gbkey=rRNA;gene=rrsE;product=16S ribosomal RNA
NC_007606.1	RefSeq	exon	3722468	3724009	.	-	.	ID=id610;Parent=rna95;Dbxref=GeneID:3798015;gbkey=rRNA;gene=rrsE;product=16S ribosomal RNA
NC_007606.1	RefSeq	gene	3724491	3725183	.	+	.	ID=gene3920;Dbxref=GeneID:3798016;Name=yieP;Note=SDY3992;gbkey=Gene;gene=yieP;gene_biotype=protein_coding;locus_tag=SDY_3992
NC_007606.1	RefSeq	CDS	3724491	3725183	.	+	0	ID=cds3465;Parent=gene3920;Dbxref=Genbank:YP_405404.1,GeneID:3798016;Name=YP_405404.1;Note=Code: K%3B COG: COG2186;gbkey=CDS;gene=yieP;product=hypothetical protein;protein_id=YP_405404.1;transl_table=11
NC_007606.1	RefSeq	gene	3725206	3726633	.	+	.	ID=gene3921;Dbxref=GeneID:3798017;Name=yieO;Note=SDY3993;gbkey=Gene;gene=yieO;gene_biotype=protein_coding;locus_tag=SDY_3993
NC_007606.1	RefSeq	CDS	3725206	3726633	.	+	0	ID=cds3466;Parent=gene3921;Dbxref=Genbank:YP_405405.1,GeneID:3798017;Name=YP_405405.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=yieO;product=transport protein;protein_id=YP_405405.1;transl_table=11
NC_007606.1	RefSeq	gene	3726641	3727591	.	-	.	ID=gene3922;Dbxref=GeneID:3798018;Name=rbsR;Note=SDY3994;gbkey=Gene;gene=rbsR;gene_biotype=protein_coding;locus_tag=SDY_3994
NC_007606.1	RefSeq	CDS	3726641	3727591	.	-	0	ID=cds3467;Parent=gene3922;Dbxref=Genbank:YP_405406.1,GeneID:3798018;Name=YP_405406.1;Note=DNA-binding transcriptional repressor of ribose metabolism;gbkey=CDS;gene=rbsR;product=transcriptional repressor RbsR;protein_id=YP_405406.1;transl_table=11
NC_007606.1	RefSeq	gene	3727595	3728524	.	-	.	ID=gene3923;Dbxref=GeneID:3798019;Name=rbsK;Note=SDY3995;gbkey=Gene;gene=rbsK;gene_biotype=protein_coding;locus_tag=SDY_3995
NC_007606.1	RefSeq	CDS	3727595	3728524	.	-	0	ID=cds3468;Parent=gene3923;Dbxref=Genbank:YP_405407.1,GeneID:3798019;Name=YP_405407.1;Note=catalyzes the formation of D-ribose 5-phosphate from ribose;gbkey=CDS;gene=rbsK;product=ribokinase;protein_id=YP_405407.1;transl_table=11
NC_007606.1	RefSeq	gene	3728650	3729536	.	-	.	ID=gene3924;Dbxref=GeneID:3798020;Name=rbsB;Note=SDY3996%3B frameshift%3B original product: D-ribose periplasmic binding protein;gbkey=Gene;gene=rbsB;gene_biotype=pseudogene;locus_tag=SDY_3996;pseudo=true
NC_007606.1	RefSeq	gene	3729561	3730526	.	-	.	ID=gene3925;Dbxref=GeneID:3797670;Name=rbsC;Note=SDY3997;gbkey=Gene;gene=rbsC;gene_biotype=protein_coding;locus_tag=SDY_3997
NC_007606.1	RefSeq	CDS	3729561	3730526	.	-	0	ID=cds3469;Parent=gene3925;Dbxref=Genbank:YP_405408.1,GeneID:3797670;Name=YP_405408.1;Note=functions to transport ribose at high affinity%3B forms a complex with RbsA2C2B;gbkey=CDS;gene=rbsC;product=ribose ABC transporter permease;protein_id=YP_405408.1;transl_table=11
NC_007606.1	RefSeq	region	3730620	3731379	.	-	.	ID=id611;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3730634	3731029	.	-	.	ID=gene3926;Dbxref=GeneID:3797671;Name=SDY_3998;Note=SDY3998;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_3998
NC_007606.1	RefSeq	CDS	3730634	3731029	.	-	0	ID=cds3470;Parent=gene3926;Dbxref=Genbank:YP_405409.1,GeneID:3797671;Name=YP_405409.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405409.1;transl_table=11
NC_007606.1	RefSeq	gene	3731056	3731328	.	-	.	ID=gene3927;Dbxref=GeneID:18263161;Name=SDY_4774;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4774
NC_007606.1	RefSeq	CDS	3731056	3731328	.	-	0	ID=cds3471;Parent=gene3927;Dbxref=Genbank:YP_009000847.1,GeneID:18263161;Name=YP_009000847.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000847.1;transl_table=11
NC_007606.1	RefSeq	gene	3731368	3732810	.	-	.	ID=gene3928;Dbxref=GeneID:3797672;Name=rbsA;Note=SDY3999%3B contains in-frame stop codon%3B original product: ATP-binding component of D-ribose high-affinity transport system;gbkey=Gene;gene=rbsA;gene_biotype=pseudogene;locus_tag=SDY_3999;pseudo=true
NC_007606.1	RefSeq	gene	3732818	3733249	.	-	.	ID=gene3929;Dbxref=GeneID:3797673;Name=rbsD;Note=SDY4000%3B contains in-frame stop codon%3B original product: D-ribose high-affinity transport system%3B membrane-associated protein;gbkey=Gene;gene=rbsD;gene_biotype=pseudogene;locus_tag=SDY_4000;pseudo=true
NC_007606.1	RefSeq	gene	3733404	3735278	.	-	.	ID=gene3930;Dbxref=GeneID:3797674;Name=trkD;Note=SDY4001;gbkey=Gene;gene=trkD;gene_biotype=protein_coding;locus_tag=SDY_4001
NC_007606.1	RefSeq	CDS	3733404	3735278	.	-	0	ID=cds3472;Parent=gene3930;Dbxref=Genbank:YP_405410.1,GeneID:3797674;Name=YP_405410.1;Note=Responsible for the low-affinity transport of potassium into the cell%3B involved in potassium ion uptake under hyper-osmotic stress at a low pH;gbkey=CDS;gene=trkD;product=potassium transport protein Kup;protein_id=YP_405410.1;transl_table=11
NC_007606.1	RefSeq	gene	3735501	3736997	.	+	.	ID=gene3931;Dbxref=GeneID:3797675;Name=yieN;Note=SDY4002;gbkey=Gene;gene=yieN;gene_biotype=protein_coding;locus_tag=SDY_4002
NC_007606.1	RefSeq	CDS	3735501	3736997	.	+	0	ID=cds3473;Parent=gene3931;Dbxref=Genbank:YP_405411.2,GeneID:3797675;Name=YP_405411.2;Note=''interacts with LdcI%2C lysine decarboxylase%3B may be active in late log/ early stationary phase'';gbkey=CDS;gene=yieN;product=regulatory ATPase RavA;protein_id=YP_405411.2;transl_table=11
NC_007606.1	RefSeq	gene	3736991	3738442	.	+	.	ID=gene3932;Dbxref=GeneID:3797676;Name=yieM;Note=SDY4003;gbkey=Gene;gene=yieM;gene_biotype=protein_coding;locus_tag=SDY_4003
NC_007606.1	RefSeq	CDS	3736991	3738442	.	+	0	ID=cds3474;Parent=gene3932;Dbxref=Genbank:YP_405412.1,GeneID:3797676;Name=YP_405412.1;Note=contains a von Willibrand factor type A domain%3B stimulates the ATPase activity of RavA;gbkey=CDS;gene=yieM;product=hypothetical protein;protein_id=YP_405412.1;transl_table=11
NC_007606.1	RefSeq	gene	3738447	3739439	.	-	.	ID=gene3933;Dbxref=GeneID:3797677;Name=asnA;Note=SDY4004;gbkey=Gene;gene=asnA;gene_biotype=protein_coding;locus_tag=SDY_4004
NC_007606.1	RefSeq	CDS	3738447	3739439	.	-	0	ID=cds3475;Parent=gene3933;Dbxref=Genbank:YP_405413.1,GeneID:3797677;Name=YP_405413.1;Note=catalyzes the formation of asparagine from aspartate and ammonia;gbkey=CDS;gene=asnA;product=asparagine synthetase AsnA;protein_id=YP_405413.1;transl_table=11
NC_007606.1	RefSeq	gene	3739591	3740049	.	+	.	ID=gene3934;Dbxref=GeneID:3797678;Name=asnC;Note=SDY4005;gbkey=Gene;gene=asnC;gene_biotype=protein_coding;locus_tag=SDY_4005
NC_007606.1	RefSeq	CDS	3739591	3740049	.	+	0	ID=cds3476;Parent=gene3934;Dbxref=Genbank:YP_405414.1,GeneID:3797678;Name=YP_405414.1;Note=transcriptional repressor of asnA which codes for aspartate-ammonia ligase;gbkey=CDS;gene=asnC;product=DNA-binding transcriptional regulator AsnC;protein_id=YP_405414.1;transl_table=11
NC_007606.1	RefSeq	gene	3740139	3740582	.	+	.	ID=gene3935;Dbxref=GeneID:3797679;Name=mioC;Note=SDY4006;gbkey=Gene;gene=mioC;gene_biotype=protein_coding;locus_tag=SDY_4006
NC_007606.1	RefSeq	CDS	3740139	3740582	.	+	0	ID=cds3477;Parent=gene3935;Dbxref=Genbank:YP_405415.1,GeneID:3797679;Name=YP_405415.1;Note=''An electron-transfer protein%3B flavodoxin binds one FMN molecule%2C which serves as a redox-active prosthetic group'';gbkey=CDS;gene=mioC;product=flavodoxin;protein_id=YP_405415.1;transl_table=11
NC_007606.1	RefSeq	gene	3740961	3742850	.	+	.	ID=gene3936;Dbxref=GeneID:3797680;Name=gidA;Note=SDY4007;gbkey=Gene;gene=gidA;gene_biotype=protein_coding;locus_tag=SDY_4007
NC_007606.1	RefSeq	CDS	3740961	3742850	.	+	0	ID=cds3478;Parent=gene3936;Dbxref=Genbank:YP_405416.1,GeneID:3797680;Name=YP_405416.1;Note=GidA%3B glucose-inhibited cell division protein A%3B involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs;gbkey=CDS;gene=gidA;product=tRNA uridine 5-carboxymethylaminomethyl modification protein GidA;protein_id=YP_405416.1;transl_table=11
NC_007606.1	RefSeq	gene	3742914	3743537	.	+	.	ID=gene3937;Dbxref=GeneID:3797681;Name=gidB;Note=SDY4008;gbkey=Gene;gene=gidB;gene_biotype=protein_coding;locus_tag=SDY_4008
NC_007606.1	RefSeq	CDS	3742914	3743537	.	+	0	ID=cds3479;Parent=gene3937;Dbxref=Genbank:YP_405417.1,GeneID:3797681;Name=YP_405417.1;Note=glucose-inhibited division protein B%3B SAM-dependent methyltransferase%3B methylates the N7 position of guanosine in position 527 of 16S rRNA;gbkey=CDS;gene=gidB;product=16S rRNA methyltransferase GidB;protein_id=YP_405417.1;transl_table=11
NC_007606.1	RefSeq	gene	3744154	3744534	.	+	.	ID=gene3938;Dbxref=GeneID:3797682;Name=atpI;Note=SDY4009;gbkey=Gene;gene=atpI;gene_biotype=protein_coding;locus_tag=SDY_4009
NC_007606.1	RefSeq	CDS	3744154	3744534	.	+	0	ID=cds3480;Parent=gene3938;Dbxref=Genbank:YP_405418.2,GeneID:3797682;Name=YP_405418.2;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation;gbkey=CDS;gene=atpI;product=F0F1 ATP synthase subunit I;protein_id=YP_405418.2;transl_table=11
NC_007606.1	RefSeq	gene	3744543	3745358	.	+	.	ID=gene3939;Dbxref=GeneID:3797683;Name=atpB;Note=SDY4010;gbkey=Gene;gene=atpB;gene_biotype=protein_coding;locus_tag=SDY_4010
NC_007606.1	RefSeq	CDS	3744543	3745358	.	+	0	ID=cds3481;Parent=gene3939;Dbxref=Genbank:YP_405419.1,GeneID:3797683;Name=YP_405419.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0;gbkey=CDS;gene=atpB;product=ATP synthase F0F1 subunit A;protein_id=YP_405419.1;transl_table=11
NC_007606.1	RefSeq	gene	3745405	3745644	.	+	.	ID=gene3940;Dbxref=GeneID:3797684;Name=atpE;Note=SDY4011;gbkey=Gene;gene=atpE;gene_biotype=protein_coding;locus_tag=SDY_4011
NC_007606.1	RefSeq	CDS	3745405	3745644	.	+	0	ID=cds3482;Parent=gene3940;Dbxref=Genbank:YP_405420.1,GeneID:3797684;Name=YP_405420.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0;gbkey=CDS;gene=atpE;product=ATP synthase F0F1 subunit C;protein_id=YP_405420.1;transl_table=11
NC_007606.1	RefSeq	gene	3745706	3746176	.	+	.	ID=gene3941;Dbxref=GeneID:3797685;Name=atpF;Note=SDY4012;gbkey=Gene;gene=atpF;gene_biotype=protein_coding;locus_tag=SDY_4012
NC_007606.1	RefSeq	CDS	3745706	3746176	.	+	0	ID=cds3483;Parent=gene3941;Dbxref=Genbank:YP_405421.1,GeneID:3797685;Name=YP_405421.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.;gbkey=CDS;gene=atpF;product=ATP synthase F0F1 subunit B;protein_id=YP_405421.1;transl_table=11
NC_007606.1	RefSeq	gene	3746191	3746724	.	+	.	ID=gene3942;Dbxref=GeneID:3797686;Name=atpH;Note=SDY4013;gbkey=Gene;gene=atpH;gene_biotype=protein_coding;locus_tag=SDY_4013
NC_007606.1	RefSeq	CDS	3746191	3746724	.	+	0	ID=cds3484;Parent=gene3942;Dbxref=Genbank:YP_405422.1,GeneID:3797686;Name=YP_405422.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane%3B the delta subunit is part of the catalytic core of the ATP synthase complex;gbkey=CDS;gene=atpH;product=ATP synthase F0F1 subunit delta;protein_id=YP_405422.1;transl_table=11
NC_007606.1	RefSeq	gene	3746737	3748278	.	+	.	ID=gene3943;Dbxref=GeneID:3797687;Name=atpA;Note=SDY4014;gbkey=Gene;gene=atpA;gene_biotype=protein_coding;locus_tag=SDY_4014
NC_007606.1	RefSeq	CDS	3746737	3748278	.	+	0	ID=cds3485;Parent=gene3943;Dbxref=Genbank:YP_405423.1,GeneID:3797687;Name=YP_405423.1;Note=produces ATP from ADP in the presence of a proton gradient across the membrane%3B the alpha chain is a catalytic subunit;gbkey=CDS;gene=atpA;product=ATP synthase F0F1 subunit alpha;protein_id=YP_405423.1;transl_table=11
NC_007606.1	RefSeq	gene	3748329	3749192	.	+	.	ID=gene3944;Dbxref=GeneID:3797688;Name=atpG;Note=SDY4015;gbkey=Gene;gene=atpG;gene_biotype=protein_coding;locus_tag=SDY_4015
NC_007606.1	RefSeq	CDS	3748329	3749192	.	+	0	ID=cds3486;Parent=gene3944;Dbxref=Genbank:YP_405424.1,GeneID:3797688;Name=YP_405424.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit;gbkey=CDS;gene=atpG;product=ATP synthase F0F1 subunit gamma;protein_id=YP_405424.1;transl_table=11
NC_007606.1	RefSeq	gene	3749219	3750601	.	+	.	ID=gene3945;Dbxref=GeneID:3797689;Name=atpD;Note=SDY4016;gbkey=Gene;gene=atpD;gene_biotype=protein_coding;locus_tag=SDY_4016
NC_007606.1	RefSeq	CDS	3749219	3750601	.	+	0	ID=cds3487;Parent=gene3945;Dbxref=Genbank:YP_405425.1,GeneID:3797689;Name=YP_405425.1;Note=Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit;gbkey=CDS;gene=atpD;product=ATP synthase F0F1 subunit beta;protein_id=YP_405425.1;transl_table=11
NC_007606.1	RefSeq	gene	3750622	3751041	.	+	.	ID=gene3946;Dbxref=GeneID:3796862;Name=atpC;Note=SDY4017;gbkey=Gene;gene=atpC;gene_biotype=protein_coding;locus_tag=SDY_4017
NC_007606.1	RefSeq	CDS	3750622	3751041	.	+	0	ID=cds3488;Parent=gene3946;Dbxref=Genbank:YP_405426.1,GeneID:3796862;Name=YP_405426.1;Note=part of catalytic core of ATP synthase%3B alpha(3)beta(3)gamma(1)delta(1)epsilon(1)%3B involved in producing ATP from ADP in the presence of the proton motive force across the membrane;gbkey=CDS;gene=atpC;product=ATP synthase F0F1 subunit epsilon;protein_id=YP_405426.1;transl_table=11
NC_007606.1	RefSeq	gene	3751393	3752763	.	+	.	ID=gene3947;Dbxref=GeneID:3796863;Name=glmU;Note=SDY4018;gbkey=Gene;gene=glmU;gene_biotype=protein_coding;locus_tag=SDY_4018
NC_007606.1	RefSeq	CDS	3751393	3752763	.	+	0	ID=cds3489;Parent=gene3947;Dbxref=Genbank:YP_405427.1,GeneID:3796863;Name=YP_405427.1;Note=forms a homotrimer%3B catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc%3B function in cell wall synthesis;gbkey=CDS;gene=glmU;product=bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase;protein_id=YP_405427.1;transl_table=11
NC_007606.1	RefSeq	gene	3752925	3754754	.	+	.	ID=gene3948;Dbxref=GeneID:3796864;Name=glmS;Note=SDY4019;gbkey=Gene;gene=glmS;gene_biotype=protein_coding;locus_tag=SDY_4019
NC_007606.1	RefSeq	CDS	3752925	3754754	.	+	0	ID=cds3490;Parent=gene3948;Dbxref=Genbank:YP_405428.1,GeneID:3796864;Name=YP_405428.1;Note=''Catalyzes the first step in hexosamine metabolism%2C converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source'';gbkey=CDS;gene=glmS;product=glucosamine--fructose-6-phosphate aminotransferase;protein_id=YP_405428.1;transl_table=11
NC_007606.1	RefSeq	region	3754984	3756336	.	-	.	ID=id612;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3755155	3756363	.	-	.	ID=gene3949;Dbxref=GeneID:3796865;Name=SDY_4020;Note=SDY4020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4020
NC_007606.1	RefSeq	CDS	3755155	3756363	.	-	0	ID=cds3491;Parent=gene3949;Dbxref=Genbank:YP_405429.1,GeneID:3796865;Name=YP_405429.1;gbkey=CDS;product=insertion sequence element IS1294 transposase;protein_id=YP_405429.1;transl_table=11
NC_007606.1	RefSeq	gene	3756344	3756616	.	-	.	ID=gene3950;Dbxref=GeneID:3796866;Name=SDY_4021;Note=SDY4021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4021
NC_007606.1	RefSeq	CDS	3756344	3756616	.	-	0	ID=cds3492;Parent=gene3950;Dbxref=Genbank:YP_405430.1,GeneID:3796866;Name=YP_405430.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405430.1;transl_table=11
NC_007606.1	RefSeq	gene	3756878	3757918	.	+	.	ID=gene3951;Dbxref=GeneID:3796867;Name=pstS;Note=SDY4022;gbkey=Gene;gene=pstS;gene_biotype=protein_coding;locus_tag=SDY_4022
NC_007606.1	RefSeq	CDS	3756878	3757918	.	+	0	ID=cds3493;Parent=gene3951;Dbxref=Genbank:YP_405431.1,GeneID:3796867;Name=YP_405431.1;Note=Code: P%3B COG: COG0226;gbkey=CDS;gene=pstS;product=phosphate ABC transporter substrate-binding protein;protein_id=YP_405431.1;transl_table=11
NC_007606.1	RefSeq	gene	3758004	3759005	.	+	.	ID=gene3952;Dbxref=GeneID:3796868;Name=pstC;Note=SDY4023;gbkey=Gene;gene=pstC;gene_biotype=protein_coding;locus_tag=SDY_4023
NC_007606.1	RefSeq	CDS	3758004	3759005	.	+	0	ID=cds3494;Parent=gene3952;Dbxref=Genbank:YP_405432.1,GeneID:3796868;Name=YP_405432.1;Note=part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstC;product=phosphate transporter permease PstC;protein_id=YP_405432.1;transl_table=11
NC_007606.1	RefSeq	gene	3759005	3759895	.	+	.	ID=gene3953;Dbxref=GeneID:3796869;Name=pstA;Note=SDY4024;gbkey=Gene;gene=pstA;gene_biotype=protein_coding;locus_tag=SDY_4024
NC_007606.1	RefSeq	CDS	3759005	3759895	.	+	0	ID=cds3495;Parent=gene3953;Dbxref=Genbank:YP_405433.1,GeneID:3796869;Name=YP_405433.1;Note=Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions;gbkey=CDS;gene=pstA;product=phosphate transporter permease PtsA;protein_id=YP_405433.1;transl_table=11
NC_007606.1	RefSeq	gene	3760078	3760851	.	+	.	ID=gene3954;Dbxref=GeneID:3796870;Name=pstB;Note=SDY4025;gbkey=Gene;gene=pstB;gene_biotype=protein_coding;locus_tag=SDY_4025
NC_007606.1	RefSeq	CDS	3760078	3760851	.	+	0	ID=cds3496;Parent=gene3954;Dbxref=Genbank:YP_405434.1,GeneID:3796870;Name=YP_405434.1;Note=Code: P%3B COG: COG1117;gbkey=CDS;gene=pstB;product=phosphate transporter subunit;protein_id=YP_405434.1;transl_table=11
NC_007606.1	RefSeq	gene	3760866	3761591	.	+	.	ID=gene3955;Dbxref=GeneID:3796871;Name=phoU;Note=SDY4026;gbkey=Gene;gene=phoU;gene_biotype=protein_coding;locus_tag=SDY_4026
NC_007606.1	RefSeq	CDS	3760866	3761591	.	+	0	ID=cds3497;Parent=gene3955;Dbxref=Genbank:YP_405435.1,GeneID:3796871;Name=YP_405435.1;Note=regulates several genes involved in high affinity phosphate uptake%3B under conditions of high phosphate concentrations downregulates the PHO regulon;gbkey=CDS;gene=phoU;product=transcriptional regulator PhoU;protein_id=YP_405435.1;transl_table=11
NC_007606.1	RefSeq	gene	3762014	3763675	.	+	.	ID=gene3956;Dbxref=GeneID:3796872;Name=SDY_4027;Note=SDY4027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4027
NC_007606.1	RefSeq	CDS	3762014	3763675	.	+	0	ID=cds3498;Parent=gene3956;Dbxref=Genbank:YP_405436.1,GeneID:3796872;Name=YP_405436.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405436.1;transl_table=11
NC_007606.1	RefSeq	gene	3763990	3764493	.	+	.	ID=gene3957;Dbxref=GeneID:3796873;Name=SDY_4028;Note=SDY4028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4028
NC_007606.1	RefSeq	CDS	3763990	3764493	.	+	0	ID=cds3499;Parent=gene3957;Dbxref=Genbank:YP_405437.1,GeneID:3796873;Name=YP_405437.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405437.1;transl_table=11
NC_007606.1	RefSeq	region	3764681	3765448	.	+	.	ID=id613;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3764736	3765011	.	+	.	ID=gene3958;Dbxref=GeneID:3796874;Name=insA;Note=SDY4029;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4029
NC_007606.1	RefSeq	CDS	3764736	3765011	.	+	0	ID=cds3500;Parent=gene3958;Dbxref=Genbank:YP_405438.1,GeneID:3796874;Name=YP_405438.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405438.1;transl_table=11
NC_007606.1	RefSeq	gene	3765056	3765433	.	+	.	ID=gene3959;Dbxref=GeneID:3796875;Name=insB;Note=SDY4030;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4030
NC_007606.1	RefSeq	CDS	3765056	3765433	.	+	0	ID=cds3501;Parent=gene3959;Dbxref=Genbank:YP_405439.1,GeneID:3796875;Name=YP_405439.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405439.1;transl_table=11
NC_007606.1	RefSeq	region	3766189	3766954	.	+	.	ID=id614;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3766246	3766518	.	+	.	ID=gene3960;Dbxref=GeneID:18263162;Name=SDY_4775;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4775
NC_007606.1	RefSeq	CDS	3766246	3766518	.	+	0	ID=cds3502;Parent=gene3960;Dbxref=Genbank:YP_009000848.1,GeneID:18263162;Name=YP_009000848.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000848.1;transl_table=11
NC_007606.1	RefSeq	gene	3766929	3767534	.	+	.	ID=gene3961;Dbxref=GeneID:3796877;Name=SDY_4032;Note=SDY4032;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4032;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	3767585	3768784	.	+	.	ID=gene3962;Dbxref=GeneID:3796878;Name=SDY_4033;Note=SDY4033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4033
NC_007606.1	RefSeq	CDS	3767585	3768784	.	+	0	ID=cds3503;Parent=gene3962;Dbxref=Genbank:YP_405442.1,GeneID:3796878;Name=YP_405442.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405442.1;transl_table=11
NC_007606.1	RefSeq	gene	3769333	3771840	.	+	.	ID=gene3963;Dbxref=GeneID:3796879;Name=SDY_4034;Note=SDY4034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4034
NC_007606.1	RefSeq	CDS	3769333	3771840	.	+	0	ID=cds3504;Parent=gene3963;Dbxref=Genbank:YP_405443.1,GeneID:3796879;Name=YP_405443.1;Note=Code: UW%3B COG: COG5295;gbkey=CDS;product=hypothetical protein;protein_id=YP_405443.1;transl_table=11
NC_007606.1	RefSeq	gene	3771929	3772765	.	+	.	ID=gene3964;Dbxref=GeneID:3796880;Name=SDY_4035;Note=SDY4035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4035
NC_007606.1	RefSeq	CDS	3771929	3772765	.	+	0	ID=cds3505;Parent=gene3964;Dbxref=Genbank:YP_405444.1,GeneID:3796880;Name=YP_405444.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405444.1;transl_table=11
NC_007606.1	RefSeq	gene	3773192	3774847	.	+	.	ID=gene3965;Dbxref=GeneID:3795518;Name=lldP;Note=SDY4036;gbkey=Gene;gene=lldP;gene_biotype=protein_coding;locus_tag=SDY_4036
NC_007606.1	RefSeq	CDS	3773192	3774847	.	+	0	ID=cds3506;Parent=gene3965;Dbxref=Genbank:YP_405445.1,GeneID:3795518;Name=YP_405445.1;Note=Code: C%3B COG: COG1620;gbkey=CDS;gene=lldP;product=L-lactate permease;protein_id=YP_405445.1;transl_table=11
NC_007606.1	RefSeq	gene	3774847	3775623	.	+	.	ID=gene3966;Dbxref=GeneID:3795519;Name=lldR;Note=SDY4037;gbkey=Gene;gene=lldR;gene_biotype=protein_coding;locus_tag=SDY_4037
NC_007606.1	RefSeq	CDS	3774847	3775623	.	+	0	ID=cds3507;Parent=gene3966;Dbxref=Genbank:YP_405446.1,GeneID:3795519;Name=YP_405446.1;Note=represses the lctPRD operon;gbkey=CDS;gene=lldR;product=DNA-binding transcriptional repressor LldR;protein_id=YP_405446.1;transl_table=11
NC_007606.1	RefSeq	gene	3775620	3776810	.	+	.	ID=gene3967;Dbxref=GeneID:3795520;Name=lldD;Note=SDY4038;gbkey=Gene;gene=lldD;gene_biotype=protein_coding;locus_tag=SDY_4038
NC_007606.1	RefSeq	CDS	3775620	3776810	.	+	0	ID=cds3508;Parent=gene3967;Dbxref=Genbank:YP_405447.1,GeneID:3795520;Name=YP_405447.1;Note=flavin mononucleotide-dependent dehydrogenase%3B functions in aerobic respiration and also has a role in anaerobic nitrate respiration;gbkey=CDS;gene=lldD;product=L-lactate dehydrogenase;protein_id=YP_405447.1;transl_table=11
NC_007606.1	RefSeq	gene	3776996	3777469	.	+	.	ID=gene3968;Dbxref=GeneID:3795521;Name=yibK;Note=SDY4039;gbkey=Gene;gene=yibK;gene_biotype=protein_coding;locus_tag=SDY_4039
NC_007606.1	RefSeq	CDS	3776996	3777469	.	+	0	ID=cds3509;Parent=gene3968;Dbxref=Genbank:YP_405448.1,GeneID:3795521;Name=YP_405448.1;Note=member of the SPOUT superfamily of RNA methyltransferases%3B no methyltransferase activity observed with certain tRNA substrates;gbkey=CDS;gene=yibK;product=tRNA/rRNA methyltransferase YibK;protein_id=YP_405448.1;transl_table=11
NC_007606.1	RefSeq	gene	3777522	3778343	.	-	.	ID=gene3969;Dbxref=GeneID:3795522;Name=cysE;Note=SDY4040;gbkey=Gene;gene=cysE;gene_biotype=protein_coding;locus_tag=SDY_4040
NC_007606.1	RefSeq	CDS	3777522	3778343	.	-	0	ID=cds3510;Parent=gene3969;Dbxref=Genbank:YP_405449.1,GeneID:3795522;Name=YP_405449.1;Note=catalyzes the O-acetylation of serine;gbkey=CDS;gene=cysE;product=serine acetyltransferase;protein_id=YP_405449.1;transl_table=11
NC_007606.1	RefSeq	gene	3778423	3779442	.	-	.	ID=gene3970;Dbxref=GeneID:3795523;Name=gpsA;Note=SDY4041;gbkey=Gene;gene=gpsA;gene_biotype=protein_coding;locus_tag=SDY_4041
NC_007606.1	RefSeq	CDS	3778423	3779442	.	-	0	ID=cds3511;Parent=gene3970;Dbxref=Genbank:YP_405450.1,GeneID:3795523;Name=YP_405450.1;Note=catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate;gbkey=CDS;gene=gpsA;product=NAD(P)H-dependent glycerol-3-phosphate dehydrogenase;protein_id=YP_405450.1;transl_table=11
NC_007606.1	RefSeq	gene	3779442	3779909	.	-	.	ID=gene3971;Dbxref=GeneID:3795524;Name=secB;Note=SDY4042;gbkey=Gene;gene=secB;gene_biotype=protein_coding;locus_tag=SDY_4042
NC_007606.1	RefSeq	CDS	3779442	3779909	.	-	0	ID=cds3512;Parent=gene3971;Dbxref=Genbank:YP_405451.1,GeneID:3795524;Name=YP_405451.1;Note=molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm%3B in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA;gbkey=CDS;gene=secB;product=preprotein translocase subunit SecB;protein_id=YP_405451.1;transl_table=11
NC_007606.1	RefSeq	gene	3779972	3780223	.	-	.	ID=gene3972;Dbxref=GeneID:3795525;Name=grxC;Note=SDY4043;gbkey=Gene;gene=grxC;gene_biotype=protein_coding;locus_tag=SDY_4043
NC_007606.1	RefSeq	CDS	3779972	3780223	.	-	0	ID=cds3513;Parent=gene3972;Dbxref=Genbank:YP_405452.1,GeneID:3795525;Name=YP_405452.1;Note=Code: O%3B COG: COG0695;gbkey=CDS;gene=grxC;product=glutaredoxin 3;protein_id=YP_405452.1;transl_table=11
NC_007606.1	RefSeq	gene	3780365	3780796	.	-	.	ID=gene3973;Dbxref=GeneID:3795526;Name=yibN;Note=SDY4044;gbkey=Gene;gene=yibN;gene_biotype=protein_coding;locus_tag=SDY_4044
NC_007606.1	RefSeq	CDS	3780365	3780796	.	-	0	ID=cds3514;Parent=gene3973;Dbxref=Genbank:YP_405453.1,GeneID:3795526;Name=YP_405453.1;Note=Code: P%3B COG: COG0607;gbkey=CDS;gene=yibN;product=hypothetical protein;protein_id=YP_405453.1;transl_table=11
NC_007606.1	RefSeq	gene	3781041	3782585	.	+	.	ID=gene3974;Dbxref=GeneID:3795527;Name=yibO;Note=SDY4045;gbkey=Gene;gene=yibO;gene_biotype=protein_coding;locus_tag=SDY_4045
NC_007606.1	RefSeq	CDS	3781041	3782585	.	+	0	ID=cds3515;Parent=gene3974;Dbxref=Genbank:YP_405454.1,GeneID:3795527;Name=YP_405454.1;Note=catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate;gbkey=CDS;gene=yibO;product=phosphoglyceromutase;protein_id=YP_405454.1;transl_table=11
NC_007606.1	RefSeq	gene	3782595	3783878	.	+	.	ID=gene3975;Dbxref=GeneID:3795528;Name=yibP;Note=SDY4046;gbkey=Gene;gene=yibP;gene_biotype=protein_coding;locus_tag=SDY_4046
NC_007606.1	RefSeq	CDS	3782595	3783878	.	+	0	ID=cds3516;Parent=gene3975;Dbxref=Genbank:YP_405455.1,GeneID:3795528;Name=YP_405455.1;Note=Code: D%3B COG: COG4942;gbkey=CDS;gene=yibP;product=hypothetical protein;protein_id=YP_405455.1;transl_table=11
NC_007606.1	RefSeq	gene	3784008	3784841	.	+	.	ID=gene3976;Dbxref=GeneID:3795529;Name=yibQ;Note=SDY4047;gbkey=Gene;gene=yibQ;gene_biotype=protein_coding;locus_tag=SDY_4047
NC_007606.1	RefSeq	CDS	3784008	3784841	.	+	0	ID=cds3517;Parent=gene3976;Dbxref=Genbank:YP_405456.1,GeneID:3795529;Name=YP_405456.1;Note=Code: S%3B COG: COG2861;gbkey=CDS;gene=yibQ;product=hypothetical protein;protein_id=YP_405456.1;transl_table=11
NC_007606.1	RefSeq	gene	3784847	3785851	.	-	.	ID=gene3977;Dbxref=GeneID:3795530;Name=yibD;Note=SDY4048;gbkey=Gene;gene=yibD;gene_biotype=protein_coding;locus_tag=SDY_4048
NC_007606.1	RefSeq	CDS	3784847	3785851	.	-	0	ID=cds3518;Parent=gene3977;Dbxref=Genbank:YP_405457.1,GeneID:3795530;Name=YP_405457.1;Note=Code: M%3B COG: COG0463;gbkey=CDS;gene=yibD;product=glycosyl transferase;protein_id=YP_405457.1;transl_table=11
NC_007606.1	RefSeq	gene	3786090	3787115	.	-	.	ID=gene3978;Dbxref=GeneID:3795531;Name=tdh;Note=SDY4049;gbkey=Gene;gene=tdh;gene_biotype=protein_coding;locus_tag=SDY_4049
NC_007606.1	RefSeq	CDS	3786090	3787115	.	-	0	ID=cds3519;Parent=gene3978;Dbxref=Genbank:YP_405458.1,GeneID:3795531;Name=YP_405458.1;Note=''converts threonine and NAD to 1%2C2-amino-3-oxobutanoate and NADH%3B functions in threonine catabolism'';gbkey=CDS;gene=tdh;product=L-threonine 3-dehydrogenase;protein_id=YP_405458.1;transl_table=11
NC_007606.1	RefSeq	gene	3787125	3788321	.	-	.	ID=gene3979;Dbxref=GeneID:3795532;Name=kbl;Note=SDY4050;gbkey=Gene;gene=kbl;gene_biotype=protein_coding;locus_tag=SDY_4050
NC_007606.1	RefSeq	CDS	3787125	3788321	.	-	0	ID=cds3520;Parent=gene3979;Dbxref=Genbank:YP_405459.1,GeneID:3795532;Name=YP_405459.1;Note=catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine;gbkey=CDS;gene=kbl;product=2-amino-3-ketobutyrate CoA ligase;protein_id=YP_405459.1;transl_table=11
NC_007606.1	RefSeq	gene	3788535	3789467	.	+	.	ID=gene3980;Dbxref=GeneID:3795533;Name=rfaD;Note=SDY4051;gbkey=Gene;gene=rfaD;gene_biotype=protein_coding;locus_tag=SDY_4051
NC_007606.1	RefSeq	CDS	3788535	3789467	.	+	0	ID=cds3521;Parent=gene3980;Dbxref=Genbank:YP_405460.1,GeneID:3795533;Name=YP_405460.1;Note=catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose;gbkey=CDS;gene=rfaD;product=ADP-L-glycero-D-manno-heptose-6-epimerase;protein_id=YP_405460.1;transl_table=11
NC_007606.1	RefSeq	gene	3789477	3790523	.	+	.	ID=gene3981;Dbxref=GeneID:3795534;Name=rfaF;Note=SDY4052;gbkey=Gene;gene=rfaF;gene_biotype=protein_coding;locus_tag=SDY_4052
NC_007606.1	RefSeq	CDS	3789477	3790523	.	+	0	ID=cds3522;Parent=gene3981;Dbxref=Genbank:YP_405461.1,GeneID:3795534;Name=YP_405461.1;Note=catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core;gbkey=CDS;gene=rfaF;product=ADP-heptose--LPS heptosyltransferase;protein_id=YP_405461.1;transl_table=11
NC_007606.1	RefSeq	gene	3790527	3791486	.	+	.	ID=gene3982;Dbxref=GeneID:3795535;Name=rfaC;Note=SDY4053;gbkey=Gene;gene=rfaC;gene_biotype=protein_coding;locus_tag=SDY_4053
NC_007606.1	RefSeq	CDS	3790527	3791486	.	+	0	ID=cds3523;Parent=gene3982;Dbxref=Genbank:YP_405462.1,GeneID:3795535;Name=YP_405462.1;Note=Code: M%3B COG: COG0859;gbkey=CDS;gene=rfaC;product=ADP-heptose--LPS heptosyltransferase;protein_id=YP_405462.1;transl_table=11
NC_007606.1	RefSeq	gene	3791534	3792787	.	-	.	ID=gene3983;Dbxref=GeneID:3795536;Name=waaL;Note=SDY4054;gbkey=Gene;gene=waaL;gene_biotype=protein_coding;locus_tag=SDY_4054
NC_007606.1	RefSeq	CDS	3791534	3792787	.	-	0	ID=cds3524;Parent=gene3983;Dbxref=Genbank:YP_405463.1,GeneID:3795536;Name=YP_405463.1;gbkey=CDS;gene=waaL;product=lipid A-core:surface polymer ligase WaaL;protein_id=YP_405463.1;transl_table=11
NC_007606.1	RefSeq	gene	3792822	3793595	.	-	.	ID=gene3984;Dbxref=GeneID:3795537;Name=waaX;Note=SDY4055;gbkey=Gene;gene=waaX;gene_biotype=protein_coding;locus_tag=SDY_4055
NC_007606.1	RefSeq	CDS	3792822	3793595	.	-	0	ID=cds3525;Parent=gene3984;Dbxref=Genbank:YP_405464.1,GeneID:3795537;Name=YP_405464.1;Note=Code: M%3B COG: COG3306;gbkey=CDS;gene=waaX;product=beta 1%2C4-galactosyltransferase WaaX;protein_id=YP_405464.1;transl_table=11
NC_007606.1	RefSeq	gene	3793627	3794655	.	-	.	ID=gene3985;Dbxref=GeneID:3795828;Name=waaW;Note=SDY4056;gbkey=Gene;gene=waaW;gene_biotype=protein_coding;locus_tag=SDY_4056
NC_007606.1	RefSeq	CDS	3793627	3794655	.	-	0	ID=cds3526;Parent=gene3985;Dbxref=Genbank:YP_405465.1,GeneID:3795828;Name=YP_405465.1;Note=Code: M%3B COG: COG1442;gbkey=CDS;gene=waaW;product=UDP-galactose:(galactosyl) LPS alpha1%2C2-galactosyltransferase;protein_id=YP_405465.1;transl_table=11
NC_007606.1	RefSeq	gene	3794681	3795373	.	-	.	ID=gene3986;Dbxref=GeneID:3795829;Name=rfaY;Note=SDY4057;gbkey=Gene;gene=rfaY;gene_biotype=protein_coding;locus_tag=SDY_4057
NC_007606.1	RefSeq	CDS	3794681	3795373	.	-	0	ID=cds3527;Parent=gene3986;Dbxref=Genbank:YP_405466.1,GeneID:3795829;Name=YP_405466.1;gbkey=CDS;gene=rfaY;product=lipopolysaccharide core biosynthesis protein;protein_id=YP_405466.1;transl_table=11
NC_007606.1	RefSeq	gene	3795383	3796378	.	-	.	ID=gene3987;Dbxref=GeneID:3795830;Name=rfaJ;Note=SDY4058;gbkey=Gene;gene=rfaJ;gene_biotype=protein_coding;locus_tag=SDY_4058
NC_007606.1	RefSeq	CDS	3795383	3796378	.	-	0	ID=cds3528;Parent=gene3987;Dbxref=Genbank:YP_405467.1,GeneID:3795830;Name=YP_405467.1;Note=Code: M%3B COG: COG1442;gbkey=CDS;gene=rfaJ;product=lipopolysaccharide 1%2C2-glucosyltransferase;protein_id=YP_405467.1;transl_table=11
NC_007606.1	RefSeq	gene	3796395	3797411	.	-	.	ID=gene3988;Dbxref=GeneID:3795831;Name=rfaI;Note=SDY4059;gbkey=Gene;gene=rfaI;gene_biotype=protein_coding;locus_tag=SDY_4059
NC_007606.1	RefSeq	CDS	3796395	3797411	.	-	0	ID=cds3529;Parent=gene3988;Dbxref=Genbank:YP_405468.1,GeneID:3795831;Name=YP_405468.1;Note=Code: M%3B COG: COG1442;gbkey=CDS;gene=rfaI;product=lipopolysaccharide 1%2C3-galactosyltransferase;protein_id=YP_405468.1;transl_table=11
NC_007606.1	RefSeq	gene	3797427	3798233	.	-	.	ID=gene3989;Dbxref=GeneID:3795832;Name=waaP;Note=SDY4060;gbkey=Gene;gene=waaP;gene_biotype=protein_coding;locus_tag=SDY_4060
NC_007606.1	RefSeq	CDS	3797427	3798233	.	-	0	ID=cds3530;Parent=gene3989;Dbxref=Genbank:YP_405469.1,GeneID:3795832;Name=YP_405469.1;gbkey=CDS;gene=waaP;product=LPS biosynthesis protein;protein_id=YP_405469.1;transl_table=11
NC_007606.1	RefSeq	gene	3798217	3799341	.	-	.	ID=gene3990;Dbxref=GeneID:3795833;Name=rfaG;Note=SDY4061;gbkey=Gene;gene=rfaG;gene_biotype=protein_coding;locus_tag=SDY_4061
NC_007606.1	RefSeq	CDS	3798217	3799341	.	-	0	ID=cds3531;Parent=gene3990;Dbxref=Genbank:YP_405470.1,GeneID:3795833;Name=YP_405470.1;Note=Code: M%3B COG: COG0438;gbkey=CDS;gene=rfaG;product=glucosyltransferase I;protein_id=YP_405470.1;transl_table=11
NC_007606.1	RefSeq	gene	3799338	3800396	.	-	.	ID=gene3991;Dbxref=GeneID:3795834;Name=waaQ;Note=SDY4062;gbkey=Gene;gene=waaQ;gene_biotype=protein_coding;locus_tag=SDY_4062
NC_007606.1	RefSeq	CDS	3799338	3800396	.	-	0	ID=cds3532;Parent=gene3991;Dbxref=Genbank:YP_405471.1,GeneID:3795834;Name=YP_405471.1;Note=Code: M%3B COG: COG0859;gbkey=CDS;gene=waaQ;product=lipopolysaccharide core biosynthesis protein;protein_id=YP_405471.1;transl_table=11
NC_007606.1	RefSeq	gene	3800809	3802086	.	+	.	ID=gene3992;Dbxref=GeneID:3795835;Name=kdtA;Note=SDY4063;gbkey=Gene;gene=kdtA;gene_biotype=protein_coding;locus_tag=SDY_4063
NC_007606.1	RefSeq	CDS	3800809	3802086	.	+	0	ID=cds3533;Parent=gene3992;Dbxref=Genbank:YP_405472.1,GeneID:3795835;Name=YP_405472.1;Note=catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A;gbkey=CDS;gene=kdtA;product=3-deoxy-D-manno-octulosonic-acid transferase;protein_id=YP_405472.1;transl_table=11
NC_007606.1	RefSeq	gene	3802094	3802573	.	+	.	ID=gene3993;Dbxref=GeneID:3795836;Name=coaD;Note=SDY4064;gbkey=Gene;gene=coaD;gene_biotype=protein_coding;locus_tag=SDY_4064
NC_007606.1	RefSeq	CDS	3802094	3802573	.	+	0	ID=cds3534;Parent=gene3993;Dbxref=Genbank:YP_405473.1,GeneID:3795836;Name=YP_405473.1;Note=Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA;gbkey=CDS;gene=coaD;product=phosphopantetheine adenylyltransferase;protein_id=YP_405473.1;transl_table=11
NC_007606.1	RefSeq	gene	3802612	3803421	.	-	.	ID=gene3994;Dbxref=GeneID:3795837;Name=mutM;Note=SDY4065;gbkey=Gene;gene=mutM;gene_biotype=protein_coding;locus_tag=SDY_4065
NC_007606.1	RefSeq	CDS	3802612	3803421	.	-	0	ID=cds3535;Parent=gene3994;Dbxref=Genbank:YP_405474.1,GeneID:3795837;Name=YP_405474.1;Note=Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases;gbkey=CDS;gene=mutM;product=formamidopyrimidine-DNA glycosylase;protein_id=YP_405474.1;transl_table=11
NC_007606.1	RefSeq	gene	3803519	3803686	.	-	.	ID=gene3995;Dbxref=GeneID:3795838;Name=rpmG;Note=SDY4066;gbkey=Gene;gene=rpmG;gene_biotype=protein_coding;locus_tag=SDY_4066
NC_007606.1	RefSeq	CDS	3803519	3803686	.	-	0	ID=cds3536;Parent=gene3995;Dbxref=Genbank:YP_405475.1,GeneID:3795838;Name=YP_405475.1;Note=''in Escherichia coli BM108%2C a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function%3B there are paralogous genes in several bacterial genomes%2C and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31%3B the proteins in this group lack the CXXC motif'';gbkey=CDS;gene=rpmG;product=50S ribosomal protein L33;protein_id=YP_405475.1;transl_table=11
NC_007606.1	RefSeq	gene	3803707	3803943	.	-	.	ID=gene3996;Dbxref=GeneID:3795839;Name=rpmB;Note=SDY4067;gbkey=Gene;gene=rpmB;gene_biotype=protein_coding;locus_tag=SDY_4067
NC_007606.1	RefSeq	CDS	3803707	3803943	.	-	0	ID=cds3537;Parent=gene3996;Dbxref=Genbank:YP_405476.1,GeneID:3795839;Name=YP_405476.1;Note=required for 70S ribosome assembly;gbkey=CDS;gene=rpmB;product=50S ribosomal protein L28;protein_id=YP_405476.1;transl_table=11
NC_007606.1	RefSeq	gene	3804160	3804834	.	-	.	ID=gene3997;Dbxref=GeneID:3795840;Name=radC;Note=SDY4068;gbkey=Gene;gene=radC;gene_biotype=protein_coding;locus_tag=SDY_4068
NC_007606.1	RefSeq	CDS	3804160	3804834	.	-	0	ID=cds3538;Parent=gene3997;Dbxref=Genbank:YP_405477.1,GeneID:3795840;Name=YP_405477.1;Note=Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase;gbkey=CDS;gene=radC;product=DNA repair protein RadC;protein_id=YP_405477.1;transl_table=11
NC_007606.1	RefSeq	gene	3805000	3806220	.	+	.	ID=gene3998;Dbxref=GeneID:3795841;Name=dfp;Note=SDY4069;gbkey=Gene;gene=dfp;gene_biotype=protein_coding;locus_tag=SDY_4069
NC_007606.1	RefSeq	CDS	3805000	3806220	.	+	0	ID=cds3539;Parent=gene3998;Dbxref=Genbank:YP_405478.2,GeneID:3795841;Name=YP_405478.2;Note=''catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine%2C which is then decarboxylated to form 4'-phosphopantotheine'';gbkey=CDS;gene=dfp;product=bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase;protein_id=YP_405478.2;transl_table=11
NC_007606.1	RefSeq	gene	3806201	3806656	.	+	.	ID=gene3999;Dbxref=GeneID:3795842;Name=dut;Note=SDY4070;gbkey=Gene;gene=dut;gene_biotype=protein_coding;locus_tag=SDY_4070
NC_007606.1	RefSeq	CDS	3806201	3806656	.	+	0	ID=cds3540;Parent=gene3999;Dbxref=Genbank:YP_405479.1,GeneID:3795842;Name=YP_405479.1;Note=catalyzes the formation of dUMP from dUTP;gbkey=CDS;gene=dut;product=deoxyuridine 5'-triphosphate nucleotidohydrolase;protein_id=YP_405479.1;transl_table=11
NC_007606.1	RefSeq	gene	3806763	3807359	.	+	.	ID=gene4000;Dbxref=GeneID:3795843;Name=slmA;Note=SDY4071;gbkey=Gene;gene=slmA;gene_biotype=protein_coding;gene_synonym=ttk;locus_tag=SDY_4071
NC_007606.1	RefSeq	CDS	3806763	3807359	.	+	0	ID=cds3541;Parent=gene4000;Dbxref=Genbank:YP_405480.2,GeneID:3795843;Name=YP_405480.2;Note=FtsZ binding protein%3B synthetically lethal with a defect in the Min system%3B this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly;gbkey=CDS;gene=slmA;product=nucleoid occlusion protein;protein_id=YP_405480.2;transl_table=11
NC_007606.1	RefSeq	gene	3807405	3808353	.	-	.	ID=gene4001;Dbxref=GeneID:3795844;Name=SDY_4072;Note=SDY4072;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4072;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	3808651	3809292	.	-	.	ID=gene4002;Dbxref=GeneID:3795845;Name=pyrE;Note=SDY4073;gbkey=Gene;gene=pyrE;gene_biotype=protein_coding;locus_tag=SDY_4073
NC_007606.1	RefSeq	CDS	3808651	3809292	.	-	0	ID=cds3542;Parent=gene4002;Dbxref=Genbank:YP_405482.1,GeneID:3795845;Name=YP_405482.1;Note=involved in fifth step of pyrimidine biosynthesis%3B converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate;gbkey=CDS;gene=pyrE;product=orotate phosphoribosyltransferase;protein_id=YP_405482.1;transl_table=11
NC_007606.1	RefSeq	gene	3809358	3810074	.	-	.	ID=gene4003;Dbxref=GeneID:3795846;Name=rph;Note=SDY4074;gbkey=Gene;gene=rph;gene_biotype=protein_coding;locus_tag=SDY_4074
NC_007606.1	RefSeq	CDS	3809358	3810074	.	-	0	ID=cds3543;Parent=gene4003;Dbxref=Genbank:YP_405483.1,GeneID:3795846;Name=YP_405483.1;Note=RNase PH%3B tRNA nucleotidyltransferase%3B forms hexamers in Bacillus subtilis%3B phosphoroltic 3'-5' exoribonuclease%3B involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs;gbkey=CDS;gene=rph;product=ribonuclease PH;protein_id=YP_405483.1;transl_table=11
NC_007606.1	RefSeq	gene	3810201	3811064	.	+	.	ID=gene4004;Dbxref=GeneID:3795749;Name=yicC;Note=SDY4075;gbkey=Gene;gene=yicC;gene_biotype=protein_coding;locus_tag=SDY_4075
NC_007606.1	RefSeq	CDS	3810201	3811064	.	+	0	ID=cds3544;Parent=gene4004;Dbxref=Genbank:YP_405484.1,GeneID:3795749;Name=YP_405484.1;Note=Code: S%3B COG: COG1561;gbkey=CDS;gene=yicC;product=hypothetical protein;protein_id=YP_405484.1;transl_table=11
NC_007606.1	RefSeq	gene	3811284	3812108	.	+	.	ID=gene4005;Dbxref=GeneID:3795750;Name=dinD;Note=SDY4076;gbkey=Gene;gene=dinD;gene_biotype=protein_coding;locus_tag=SDY_4076
NC_007606.1	RefSeq	CDS	3811284	3812108	.	+	0	ID=cds3545;Parent=gene4005;Dbxref=Genbank:YP_405485.2,GeneID:3795750;Name=YP_405485.2;gbkey=CDS;gene=dinD;product=DNA-damage-inducible protein D;protein_id=YP_405485.2;transl_table=11
NC_007606.1	RefSeq	gene	3812346	3813017	.	+	.	ID=gene4006;Dbxref=GeneID:3795751;Name=yicG;Note=SDY4077;gbkey=Gene;gene=yicG;gene_biotype=protein_coding;locus_tag=SDY_4077
NC_007606.1	RefSeq	CDS	3812346	3813017	.	+	0	ID=cds3546;Parent=gene4006;Dbxref=Genbank:YP_405486.1,GeneID:3795751;Name=YP_405486.1;Note=Code: S%3B COG: COG2860;gbkey=CDS;gene=yicG;product=hypothetical protein;protein_id=YP_405486.1;transl_table=11
NC_007606.1	RefSeq	gene	3813014	3814531	.	-	.	ID=gene4007;Dbxref=GeneID:3795752;Name=yicF;Note=SDY4078%3B contains in-frame stop codon%3B original product:  enzyme;gbkey=Gene;gene=yicF;gene_biotype=pseudogene;locus_tag=SDY_4078;pseudo=true
NC_007606.1	RefSeq	gene	3814950	3815573	.	+	.	ID=gene4008;Dbxref=GeneID:3795754;Name=gmk;Note=SDY4080;gbkey=Gene;gene=gmk;gene_biotype=protein_coding;locus_tag=SDY_4080
NC_007606.1	RefSeq	CDS	3814950	3815573	.	+	0	ID=cds3547;Parent=gene4008;Dbxref=Genbank:YP_405488.1,GeneID:3795754;Name=YP_405488.1;Note=''Essential for recycling GMP and indirectly%2C cGMP'';gbkey=CDS;gene=gmk;product=guanylate kinase;protein_id=YP_405488.1;transl_table=11
NC_007606.1	RefSeq	gene	3815628	3815903	.	+	.	ID=gene4009;Dbxref=GeneID:3795755;Name=rpoZ;Note=SDY4081;gbkey=Gene;gene=rpoZ;gene_biotype=protein_coding;locus_tag=SDY_4081
NC_007606.1	RefSeq	CDS	3815628	3815903	.	+	0	ID=cds3548;Parent=gene4009;Dbxref=Genbank:YP_405489.1,GeneID:3795755;Name=YP_405489.1;Note=promotes RNA polymerase assembly or stability%3B latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits;gbkey=CDS;gene=rpoZ;product=DNA-directed RNA polymerase subunit omega;protein_id=YP_405489.1;transl_table=11
NC_007606.1	RefSeq	gene	3815922	3818030	.	+	.	ID=gene4010;Dbxref=GeneID:3795756;Name=spoT;Note=SDY4082;gbkey=Gene;gene=spoT;gene_biotype=protein_coding;locus_tag=SDY_4082
NC_007606.1	RefSeq	CDS	3815922	3818030	.	+	0	ID=cds3549;Parent=gene4010;Dbxref=Genbank:YP_405490.1,GeneID:3795756;Name=YP_405490.1;Note=Code: TK%3B COG: COG0317;gbkey=CDS;gene=spoT;product=bifunctional (p)ppGpp synthetase II/ guanosine-3'%2C5'-bis pyrophosphate 3'-pyrophosphohydrolase;protein_id=YP_405490.1;transl_table=11
NC_007606.1	RefSeq	gene	3818037	3818726	.	+	.	ID=gene4011;Dbxref=GeneID:3795757;Name=spoU;Note=SDY4083;gbkey=Gene;gene=spoU;gene_biotype=protein_coding;locus_tag=SDY_4083
NC_007606.1	RefSeq	CDS	3818037	3818726	.	+	0	ID=cds3550;Parent=gene4011;Dbxref=Genbank:YP_405491.1,GeneID:3795757;Name=YP_405491.1;Note=specifically modifies tRNA at position G18;gbkey=CDS;gene=spoU;product=tRNA guanosine-2'-O-methyltransferase;protein_id=YP_405491.1;transl_table=11
NC_007606.1	RefSeq	gene	3818732	3820813	.	+	.	ID=gene4012;Dbxref=GeneID:3795758;Name=recG;Note=SDY4084;gbkey=Gene;gene=recG;gene_biotype=protein_coding;locus_tag=SDY_4084
NC_007606.1	RefSeq	CDS	3818732	3820813	.	+	0	ID=cds3551;Parent=gene4012;Dbxref=Genbank:YP_405492.1,GeneID:3795758;Name=YP_405492.1;Note=catalyzes branch migration in Holliday junction intermediates;gbkey=CDS;gene=recG;product=ATP-dependent DNA helicase RecG;protein_id=YP_405492.1;transl_table=11
NC_007606.1	RefSeq	gene	3820989	3822194	.	-	.	ID=gene4013;Dbxref=GeneID:3795759;Name=gltS;Note=SDY4085;gbkey=Gene;gene=gltS;gene_biotype=protein_coding;locus_tag=SDY_4085
NC_007606.1	RefSeq	CDS	3820989	3822194	.	-	0	ID=cds3552;Parent=gene4013;Dbxref=Genbank:YP_405493.1,GeneID:3795759;Name=YP_405493.1;Note=Code: E%3B COG: COG0786;gbkey=CDS;gene=gltS;product=glutamate transport;protein_id=YP_405493.1;transl_table=11
NC_007606.1	RefSeq	gene	3822473	3823864	.	+	.	ID=gene4014;Dbxref=GeneID:3795760;Name=yicE;Note=SDY4086;gbkey=Gene;gene=yicE;gene_biotype=protein_coding;locus_tag=SDY_4086
NC_007606.1	RefSeq	CDS	3822473	3823864	.	+	0	ID=cds3553;Parent=gene4014;Dbxref=Genbank:YP_405494.1,GeneID:3795760;Name=YP_405494.1;Note=Code: F%3B COG: COG2233;gbkey=CDS;gene=yicE;product=transport protein;protein_id=YP_405494.1;transl_table=11
NC_007606.1	RefSeq	gene	3823985	3825694	.	+	.	ID=gene4015;Dbxref=GeneID:3795761;Name=yicH;Note=SDY4087;gbkey=Gene;gene=yicH;gene_biotype=protein_coding;locus_tag=SDY_4087
NC_007606.1	RefSeq	CDS	3823985	3825694	.	+	0	ID=cds3554;Parent=gene4015;Dbxref=Genbank:YP_405495.1,GeneID:3795761;Name=YP_405495.1;gbkey=CDS;gene=yicH;product=hypothetical protein;protein_id=YP_405495.1;transl_table=11
NC_007606.1	RefSeq	gene	3825747	3826178	.	-	.	ID=gene4016;Dbxref=GeneID:3795762;Name=yicI;Note=''SDY4088%3B truncated%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yicI;gene_biotype=pseudogene;locus_tag=SDY_4088;pseudo=true
NC_007606.1	RefSeq	region	3826153	3827416	.	+	.	ID=id615;gbkey=mobile_element;gene=yicI
NC_007606.1	RefSeq	gene	3826217	3826519	.	+	.	ID=gene4017;Dbxref=GeneID:3795763;Name=SDY_4089;Note=SDY4089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4089
NC_007606.1	RefSeq	CDS	3826217	3826519	.	+	0	ID=cds3555;Parent=gene4017;Dbxref=Genbank:YP_405496.1,GeneID:3795763;Name=YP_405496.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_405496.1;transl_table=11
NC_007606.1	RefSeq	gene	3827414	3828049	.	-	.	ID=gene4018;Dbxref=GeneID:3795765;Name=melB;Note=SDY4091%3B truncated%3B original product: melibiose permease II;gbkey=Gene;gene=melB;gene_biotype=pseudogene;locus_tag=SDY_4091;pseudo=true
NC_007606.1	RefSeq	gene	3828164	3829519	.	-	.	ID=gene4019;Dbxref=GeneID:3795766;Name=melA;Note=SDY4092;gbkey=Gene;gene=melA;gene_biotype=protein_coding;locus_tag=SDY_4092
NC_007606.1	RefSeq	CDS	3828164	3829519	.	-	0	ID=cds3556;Parent=gene4019;Dbxref=Genbank:YP_405498.1,GeneID:3795766;Name=YP_405498.1;Note=Code: G%3B COG: COG1486;gbkey=CDS;gene=melA;product=alpha-galactosidase;protein_id=YP_405498.1;transl_table=11
NC_007606.1	RefSeq	gene	3829802	3830594	.	+	.	ID=gene4020;Dbxref=GeneID:3795767;Name=melR;Note=SDY4093%3B frameshift%3B original product: regulator of melibiose operon;gbkey=Gene;gene=melR;gene_biotype=pseudogene;locus_tag=SDY_4093;pseudo=true
NC_007606.1	RefSeq	gene	3830790	3833060	.	+	.	ID=gene4021;Dbxref=GeneID:3795768;Name=adiA;Note=SDY4094;gbkey=Gene;gene=adiA;gene_biotype=protein_coding;locus_tag=SDY_4094
NC_007606.1	RefSeq	CDS	3830790	3833060	.	+	0	ID=cds3557;Parent=gene4021;Dbxref=Genbank:YP_405499.1,GeneID:3795768;Name=YP_405499.1;Note=Code: E%3B COG: COG1982;gbkey=CDS;gene=adiA;product=biodegradative arginine decarboxylase;protein_id=YP_405499.1;transl_table=11
NC_007606.1	RefSeq	region	3833125	3833892	.	+	.	ID=id616;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3833180	3833455	.	+	.	ID=gene4022;Dbxref=GeneID:3799421;Name=insA;Note=SDY4095;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4095
NC_007606.1	RefSeq	CDS	3833180	3833455	.	+	0	ID=cds3558;Parent=gene4022;Dbxref=Genbank:YP_405500.1,GeneID:3799421;Name=YP_405500.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405500.1;transl_table=11
NC_007606.1	RefSeq	gene	3833500	3833877	.	+	.	ID=gene4023;Dbxref=GeneID:3799422;Name=insB;Note=SDY4096;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4096
NC_007606.1	RefSeq	CDS	3833500	3833877	.	+	0	ID=cds3559;Parent=gene4023;Dbxref=Genbank:YP_405501.1,GeneID:3799422;Name=YP_405501.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion sequence element IS1 transposase;protein_id=YP_405501.1;transl_table=11
NC_007606.1	RefSeq	gene	3834162	3834923	.	+	.	ID=gene4024;Dbxref=GeneID:3799423;Name=adiY;Note=SDY4097;gbkey=Gene;gene=adiY;gene_biotype=protein_coding;locus_tag=SDY_4097
NC_007606.1	RefSeq	CDS	3834162	3834923	.	+	0	ID=cds3560;Parent=gene4024;Dbxref=Genbank:YP_405502.1,GeneID:3799423;Name=YP_405502.1;Note=Code: K%3B COG: COG2207;gbkey=CDS;gene=adiY;product=AraC family transcriptional regulator;protein_id=YP_405502.1;transl_table=11
NC_007606.1	RefSeq	gene	3835060	3836397	.	+	.	ID=gene4025;Dbxref=GeneID:3799424;Name=yjdE;Note=SDY4098;gbkey=Gene;gene=yjdE;gene_biotype=protein_coding;locus_tag=SDY_4098
NC_007606.1	RefSeq	CDS	3835060	3836397	.	+	0	ID=cds3561;Parent=gene4025;Dbxref=Genbank:YP_405503.1,GeneID:3799424;Name=YP_405503.1;Note=Code: E%3B COG: COG0531;gbkey=CDS;gene=yjdE;product=arginine:agmatin antiporter;protein_id=YP_405503.1;transl_table=11
NC_007606.1	RefSeq	gene	3836456	3838144	.	+	.	ID=gene4026;Dbxref=GeneID:3799425;Name=yjdB;Note=SDY4099;gbkey=Gene;gene=yjdB;gene_biotype=protein_coding;locus_tag=SDY_4099
NC_007606.1	RefSeq	CDS	3836456	3838144	.	+	0	ID=cds3562;Parent=gene4026;Dbxref=Genbank:YP_405504.1,GeneID:3799425;Name=YP_405504.1;Note=with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division;gbkey=CDS;gene=yjdB;product=cell division protein;protein_id=YP_405504.1;transl_table=11
NC_007606.1	RefSeq	gene	3838141	3838789	.	+	.	ID=gene4027;Dbxref=GeneID:3799426;Name=basR;Note=''SDY4100%3B frameshift%3B original product: transcriptional regulatory protein%2C member of 2-component regulatory system'';gbkey=Gene;gene=basR;gene_biotype=pseudogene;locus_tag=SDY_4100;pseudo=true
NC_007606.1	RefSeq	gene	3838799	3839890	.	+	.	ID=gene4028;Dbxref=GeneID:3799427;Name=basS;Note=SDY4101;gbkey=Gene;gene=basS;gene_biotype=protein_coding;locus_tag=SDY_4101
NC_007606.1	RefSeq	CDS	3838799	3839890	.	+	0	ID=cds3563;Parent=gene4028;Dbxref=Genbank:YP_405505.1,GeneID:3799427;Name=YP_405505.1;Note=Code: T%3B COG: COG0642;gbkey=CDS;gene=basS;product=sensor protein BasS/PmrB;protein_id=YP_405505.1;transl_table=11
NC_007606.1	RefSeq	gene	3840067	3841569	.	-	.	ID=gene4029;Dbxref=GeneID:3799428;Name=proP;Note=SDY4102;gbkey=Gene;gene=proP;gene_biotype=protein_coding;locus_tag=SDY_4102
NC_007606.1	RefSeq	CDS	3840067	3841569	.	-	0	ID=cds3564;Parent=gene4029;Dbxref=Genbank:YP_405506.1,GeneID:3799428;Name=YP_405506.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=proP;product=proline/glycine betaine transporter;protein_id=YP_405506.1;transl_table=11
NC_007606.1	RefSeq	gene	3841833	3842678	.	-	.	ID=gene4030;Dbxref=GeneID:3799429;Name=yjcZ;Note=SDY4103;gbkey=Gene;gene=yjcZ;gene_biotype=protein_coding;locus_tag=SDY_4103
NC_007606.1	RefSeq	CDS	3841833	3842678	.	-	0	ID=cds3565;Parent=gene4030;Dbxref=Genbank:YP_405507.1,GeneID:3799429;Name=YP_405507.1;gbkey=CDS;gene=yjcZ;product=hypothetical protein;protein_id=YP_405507.1;transl_table=11
NC_007606.1	RefSeq	gene	3842708	3845713	.	-	.	ID=gene4031;Dbxref=GeneID:3799432;Name=yjdA;Note=SDY4106%3B contains IS1 insertion%3B original product:  vimentin;gbkey=Gene;gene=yjdA;gene_biotype=pseudogene;locus_tag=SDY_4106;pseudo=true
NC_007606.1	RefSeq	region	3844458	3845225	.	+	.	ID=id617;gbkey=mobile_element;gene=yjdA
NC_007606.1	RefSeq	gene	3844513	3844788	.	+	.	ID=gene4032;Dbxref=GeneID:3799430;Name=insA;Note=SDY4104;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4104
NC_007606.1	RefSeq	CDS	3844513	3844788	.	+	0	ID=cds3566;Parent=gene4032;Dbxref=Genbank:YP_405508.1,GeneID:3799430;Name=YP_405508.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405508.1;transl_table=11
NC_007606.1	RefSeq	gene	3844833	3845210	.	+	.	ID=gene4033;Dbxref=GeneID:3799431;Name=insB;Note=SDY4105;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4105
NC_007606.1	RefSeq	CDS	3844833	3845210	.	+	0	ID=cds3567;Parent=gene4033;Dbxref=Genbank:YP_405509.1,GeneID:3799431;Name=YP_405509.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405509.1;transl_table=11
NC_007606.1	RefSeq	region	3845783	3846550	.	-	.	ID=id618;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3845798	3846175	.	-	.	ID=gene4034;Dbxref=GeneID:3799433;Name=insB;Note=SDY4107;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4107
NC_007606.1	RefSeq	CDS	3845798	3846175	.	-	0	ID=cds3568;Parent=gene4034;Dbxref=Genbank:YP_405510.1,GeneID:3799433;Name=YP_405510.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405510.1;transl_table=11
NC_007606.1	RefSeq	gene	3846220	3846495	.	-	.	ID=gene4035;Dbxref=GeneID:3799434;Name=insA;Note=SDY4108;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4108
NC_007606.1	RefSeq	CDS	3846220	3846495	.	-	0	ID=cds3569;Parent=gene4035;Dbxref=Genbank:YP_405511.1,GeneID:3799434;Name=YP_405511.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405511.1;transl_table=11
NC_007606.1	RefSeq	gene	3846892	3847227	.	+	.	ID=gene4036;Dbxref=GeneID:3799435;Name=phnA;Note=SDY4109;gbkey=Gene;gene=phnA;gene_biotype=protein_coding;locus_tag=SDY_4109
NC_007606.1	RefSeq	CDS	3846892	3847227	.	+	0	ID=cds3570;Parent=gene4036;Dbxref=Genbank:YP_405512.1,GeneID:3799435;Name=YP_405512.1;Note=Code: P%3B COG: COG2824;gbkey=CDS;gene=phnA;product=hypothetical protein;protein_id=YP_405512.1;transl_table=11
NC_007606.1	RefSeq	gene	3847387	3847830	.	+	.	ID=gene4037;Dbxref=GeneID:3799436;Name=phnB;Note=''SDY4110%3B contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=phnB;gene_biotype=pseudogene;locus_tag=SDY_4110;pseudo=true
NC_007606.1	RefSeq	gene	3847963	3848751	.	+	.	ID=gene4038;Dbxref=GeneID:3799437;Name=phnC;Note=SDY4111;gbkey=Gene;gene=phnC;gene_biotype=protein_coding;locus_tag=SDY_4111
NC_007606.1	RefSeq	CDS	3847963	3848751	.	+	0	ID=cds3571;Parent=gene4038;Dbxref=Genbank:YP_405513.1,GeneID:3799437;Name=YP_405513.1;Note=Code: P%3B COG: COG3638;gbkey=CDS;gene=phnC;product=phosphonate/organophosphate ester ABC transporter ATP-binding protein;protein_id=YP_405513.1;transl_table=11
NC_007606.1	RefSeq	gene	3848776	3849792	.	+	.	ID=gene4039;Dbxref=GeneID:3799438;Name=phnD;Note=SDY4112;gbkey=Gene;gene=phnD;gene_biotype=protein_coding;locus_tag=SDY_4112
NC_007606.1	RefSeq	CDS	3848776	3849792	.	+	0	ID=cds3572;Parent=gene4039;Dbxref=Genbank:YP_405514.1,GeneID:3799438;Name=YP_405514.1;Note=Code: P%3B COG: COG3221;gbkey=CDS;gene=phnD;product=phosphonate/organophosphate ester ABC transporter substrate-binding protein;protein_id=YP_405514.1;transl_table=11
NC_007606.1	RefSeq	gene	3849847	3850677	.	+	.	ID=gene4040;Dbxref=GeneID:3799439;Name=phnE;Note=SDY4113;gbkey=Gene;gene=phnE;gene_biotype=protein_coding;locus_tag=SDY_4113
NC_007606.1	RefSeq	CDS	3849847	3850677	.	+	0	ID=cds3573;Parent=gene4040;Dbxref=Genbank:YP_405515.1,GeneID:3799439;Name=YP_405515.1;Note=Code: P%3B COG: COG3639;gbkey=CDS;gene=phnE;product=phosphonate/organophosphate ester ABC transporter permease;protein_id=YP_405515.1;transl_table=11
NC_007606.1	RefSeq	gene	3850698	3851423	.	+	.	ID=gene4041;Dbxref=GeneID:3798881;Name=phnF;Note=SDY4114;gbkey=Gene;gene=phnF;gene_biotype=protein_coding;locus_tag=SDY_4114
NC_007606.1	RefSeq	CDS	3850698	3851423	.	+	0	ID=cds3574;Parent=gene4041;Dbxref=Genbank:YP_405516.1,GeneID:3798881;Name=YP_405516.1;Note=may be involved in phosphonate uptake and biodegradation;gbkey=CDS;gene=phnF;product=phosphonate metabolism transcriptional regulator PhnF;protein_id=YP_405516.1;transl_table=11
NC_007606.1	RefSeq	gene	3851424	3851863	.	+	.	ID=gene4042;Dbxref=GeneID:3798882;Name=phnG;Note=SDY4115%3B frameshift%3B original product: phosphonate metabolism;gbkey=Gene;gene=phnG;gene_biotype=pseudogene;locus_tag=SDY_4115;pseudo=true
NC_007606.1	RefSeq	gene	3851860	3852444	.	+	.	ID=gene4043;Dbxref=GeneID:3798883;Name=phnH;Note=SDY4116;gbkey=Gene;gene=phnH;gene_biotype=protein_coding;locus_tag=SDY_4116
NC_007606.1	RefSeq	CDS	3851860	3852444	.	+	0	ID=cds3575;Parent=gene4043;Dbxref=Genbank:YP_405517.1,GeneID:3798883;Name=YP_405517.1;Note=Code: P%3B COG: COG3625;gbkey=CDS;gene=phnH;product=carbon-phosphorus lyase complex subunit;protein_id=YP_405517.1;transl_table=11
NC_007606.1	RefSeq	gene	3852444	3853508	.	+	.	ID=gene4044;Dbxref=GeneID:3798884;Name=phnI;Note=SDY4117;gbkey=Gene;gene=phnI;gene_biotype=protein_coding;locus_tag=SDY_4117
NC_007606.1	RefSeq	CDS	3852444	3853508	.	+	0	ID=cds3576;Parent=gene4044;Dbxref=Genbank:YP_405518.1,GeneID:3798884;Name=YP_405518.1;Note=Code: P%3B COG: COG3626;gbkey=CDS;gene=phnI;product=phosphonate metabolism protein;protein_id=YP_405518.1;transl_table=11
NC_007606.1	RefSeq	gene	3853501	3854346	.	+	.	ID=gene4045;Dbxref=GeneID:3798885;Name=phnJ;Note=SDY4118;gbkey=Gene;gene=phnJ;gene_biotype=protein_coding;locus_tag=SDY_4118
NC_007606.1	RefSeq	CDS	3853501	3854346	.	+	0	ID=cds3577;Parent=gene4045;Dbxref=Genbank:YP_405519.1,GeneID:3798885;Name=YP_405519.1;Note=Code: P%3B COG: COG3627;gbkey=CDS;gene=phnJ;product=phosphonate metabolism protein;protein_id=YP_405519.1;transl_table=11
NC_007606.1	RefSeq	gene	3854343	3855101	.	+	.	ID=gene4046;Dbxref=GeneID:3798886;Name=phnK;Note=SDY4119;gbkey=Gene;gene=phnK;gene_biotype=protein_coding;locus_tag=SDY_4119
NC_007606.1	RefSeq	CDS	3854343	3855101	.	+	0	ID=cds3578;Parent=gene4046;Dbxref=Genbank:YP_405520.1,GeneID:3798886;Name=YP_405520.1;Note=Code: P%3B COG: COG4107;gbkey=CDS;gene=phnK;product=phosphonate C-P lyase system protein PhnK;protein_id=YP_405520.1;transl_table=11
NC_007606.1	RefSeq	gene	3855212	3855892	.	+	.	ID=gene4047;Dbxref=GeneID:3798887;Name=phnL;Note=SDY4120;gbkey=Gene;gene=phnL;gene_biotype=protein_coding;locus_tag=SDY_4120
NC_007606.1	RefSeq	CDS	3855212	3855892	.	+	0	ID=cds3579;Parent=gene4047;Dbxref=Genbank:YP_405521.1,GeneID:3798887;Name=YP_405521.1;Note=Code: P%3B COG: COG4778;gbkey=CDS;gene=phnL;product=phosphonate ABC transporter ATP-binding protein;protein_id=YP_405521.1;transl_table=11
NC_007606.1	RefSeq	gene	3855889	3856941	.	+	.	ID=gene4048;Dbxref=GeneID:3798888;Name=phnM;Note=SDY4121;gbkey=Gene;gene=phnM;gene_biotype=protein_coding;locus_tag=SDY_4121
NC_007606.1	RefSeq	CDS	3855889	3856941	.	+	0	ID=cds3580;Parent=gene4048;Dbxref=Genbank:YP_405522.1,GeneID:3798888;Name=YP_405522.1;Note=Code: P%3B COG: COG3454;gbkey=CDS;gene=phnM;product=phosphonate metabolism protein;protein_id=YP_405522.1;transl_table=11
NC_007606.1	RefSeq	gene	3856941	3857498	.	+	.	ID=gene4049;Dbxref=GeneID:3798889;Name=phnN;Note=SDY4122;gbkey=Gene;gene=phnN;gene_biotype=protein_coding;locus_tag=SDY_4122
NC_007606.1	RefSeq	CDS	3856941	3857498	.	+	0	ID=cds3581;Parent=gene4049;Dbxref=Genbank:YP_405523.1,GeneID:3798889;Name=YP_405523.1;Note=Code: P%3B COG: COG3709;gbkey=CDS;gene=phnN;product=ribose 1%2C5-bisphosphokinase;protein_id=YP_405523.1;transl_table=11
NC_007606.1	RefSeq	gene	3857485	3857919	.	+	.	ID=gene4050;Dbxref=GeneID:3798890;Name=phnO;Note=SDY4123;gbkey=Gene;gene=phnO;gene_biotype=protein_coding;locus_tag=SDY_4123
NC_007606.1	RefSeq	CDS	3857485	3857919	.	+	0	ID=cds3582;Parent=gene4050;Dbxref=Genbank:YP_405524.1,GeneID:3798890;Name=YP_405524.1;Note=PhnO in Salmonella enterica catalyzes the acetylation of a range of aminoalkylphosphonic acids%3B part of the biochemical pathway that enables the cell to use phosphonates as a phosphorus source%3B Escherichia coli uses a different mechanism of phosphonate catabolism where PhnO is not essential and seems to play a regulatory role;gbkey=CDS;gene=phnO;product=aminoalkylphosphonic acid N-acetyltransferase;protein_id=YP_405524.1;transl_table=11
NC_007606.1	RefSeq	gene	3857921	3858679	.	+	.	ID=gene4051;Dbxref=GeneID:3798891;Name=phnP;Note=SDY4124;gbkey=Gene;gene=phnP;gene_biotype=protein_coding;locus_tag=SDY_4124
NC_007606.1	RefSeq	CDS	3857921	3858679	.	+	0	ID=cds3583;Parent=gene4051;Dbxref=Genbank:YP_405525.1,GeneID:3798891;Name=YP_405525.1;Note=required for the use of phosphonates and phosphite as phosphorus sources;gbkey=CDS;gene=phnP;product=carbon-phosphorus lyase complex accessory protein;protein_id=YP_405525.1;transl_table=11
NC_007606.1	RefSeq	gene	3858756	3859085	.	-	.	ID=gene4052;Dbxref=GeneID:3798892;Name=SDY_4125;Note=SDY4125;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4125
NC_007606.1	RefSeq	CDS	3858756	3859085	.	-	0	ID=cds3584;Parent=gene4052;Dbxref=Genbank:YP_405526.1,GeneID:3798892;Name=YP_405526.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405526.1;transl_table=11
NC_007606.1	RefSeq	gene	3859154	3859909	.	-	.	ID=gene4053;Dbxref=GeneID:3798893;Name=SDY_4126;Note=SDY4126;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4126
NC_007606.1	RefSeq	CDS	3859154	3859909	.	-	0	ID=cds3585;Parent=gene4053;Dbxref=Genbank:YP_405527.1,GeneID:3798893;Name=YP_405527.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405527.1;transl_table=11
NC_007606.1	RefSeq	gene	3859899	3862163	.	-	.	ID=gene4054;Dbxref=GeneID:3798894;Name=SDY_4127;Note=SDY4127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4127
NC_007606.1	RefSeq	CDS	3859899	3862163	.	-	0	ID=cds3586;Parent=gene4054;Dbxref=Genbank:YP_405528.1,GeneID:3798894;Name=YP_405528.1;Note=Code: T%3B COG: COG0642;gbkey=CDS;product=histidine kinase;protein_id=YP_405528.1;transl_table=11
NC_007606.1	RefSeq	gene	3862277	3863764	.	+	.	ID=gene4055;Dbxref=GeneID:3798895;Name=SDY_4128;Note=SDY4128;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4128
NC_007606.1	RefSeq	CDS	3862277	3863764	.	+	0	ID=cds3587;Parent=gene4055;Dbxref=Genbank:YP_405529.1,GeneID:3798895;Name=YP_405529.1;Note=Code: G%3B COG: COG1129;gbkey=CDS;product=ribose ABC transporter ATP-binding protein;protein_id=YP_405529.1;transl_table=11
NC_007606.1	RefSeq	gene	3863776	3864750	.	+	.	ID=gene4056;Dbxref=GeneID:3798896;Name=SDY_4129;Note=SDY4129;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4129;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	3864769	3865710	.	+	.	ID=gene4057;Dbxref=GeneID:3798897;Name=SDY_4130;Note=SDY4130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4130
NC_007606.1	RefSeq	CDS	3864769	3865710	.	+	0	ID=cds3588;Parent=gene4057;Dbxref=Genbank:YP_405531.1,GeneID:3798897;Name=YP_405531.1;Note=Code: G%3B COG: COG1879;gbkey=CDS;product=ribose ABC transporter substrate-binding protein;protein_id=YP_405531.1;transl_table=11
NC_007606.1	RefSeq	gene	3865765	3866448	.	+	.	ID=gene4058;Dbxref=GeneID:3798898;Name=SDY_4131;Note=SDY4131;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4131
NC_007606.1	RefSeq	CDS	3865765	3866448	.	+	0	ID=cds3589;Parent=gene4058;Dbxref=Genbank:YP_405532.1,GeneID:3798898;Name=YP_405532.1;Note=Code: R%3B COG: COG3822;gbkey=CDS;product=hypothetical protein;protein_id=YP_405532.1;transl_table=11
NC_007606.1	RefSeq	gene	3866463	3867323	.	+	.	ID=gene4059;Dbxref=GeneID:3798899;Name=SDY_4132;Note=SDY4132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4132
NC_007606.1	RefSeq	CDS	3866463	3867323	.	+	0	ID=cds3590;Parent=gene4059;Dbxref=Genbank:YP_405533.1,GeneID:3798899;Name=YP_405533.1;Note=Code: G%3B COG: COG0191;gbkey=CDS;product=hypothetical protein;protein_id=YP_405533.1;transl_table=11
NC_007606.1	RefSeq	gene	3867320	3868321	.	+	.	ID=gene4060;Dbxref=GeneID:3798900;Name=SDY_4133;Note=SDY4133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4133
NC_007606.1	RefSeq	CDS	3867320	3868321	.	+	0	ID=cds3591;Parent=gene4060;Dbxref=Genbank:YP_405534.1,GeneID:3798900;Name=YP_405534.1;Note=Code: G%3B COG: COG0524;gbkey=CDS;product=kinase;protein_id=YP_405534.1;transl_table=11
NC_007606.1	RefSeq	gene	3868318	3869043	.	-	.	ID=gene4061;Dbxref=GeneID:3797218;Name=SDY_4134;Note=SDY4134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4134
NC_007606.1	RefSeq	CDS	3868318	3869043	.	-	0	ID=cds3592;Parent=gene4061;Dbxref=Genbank:YP_405535.1,GeneID:3797218;Name=YP_405535.1;Note=Code: TK%3B COG: COG0745;gbkey=CDS;product=transcriptional regulator;protein_id=YP_405535.1;transl_table=11
NC_007606.1	RefSeq	region	3869053	3869818	.	-	.	ID=id619;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3869067	3869462	.	-	.	ID=gene4062;Dbxref=GeneID:3797219;Name=SDY_4135;Note=SDY4135;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4135
NC_007606.1	RefSeq	CDS	3869067	3869462	.	-	0	ID=cds3593;Parent=gene4062;Dbxref=Genbank:YP_405536.1,GeneID:3797219;Name=YP_405536.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405536.1;transl_table=11
NC_007606.1	RefSeq	gene	3869489	3869761	.	-	.	ID=gene4063;Dbxref=GeneID:18263163;Name=SDY_4776;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4776
NC_007606.1	RefSeq	CDS	3869489	3869761	.	-	0	ID=cds3594;Parent=gene4063;Dbxref=Genbank:YP_009000849.1,GeneID:18263163;Name=YP_009000849.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000849.1;transl_table=11
NC_007606.1	RefSeq	gene	3869814	3870608	.	-	.	ID=gene4064;Dbxref=GeneID:3797220;Name=SDY_4136;Note=SDY4136;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4136
NC_007606.1	RefSeq	CDS	3869814	3870608	.	-	0	ID=cds3595;Parent=gene4064;Dbxref=Genbank:YP_405537.1,GeneID:3797220;Name=YP_405537.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405537.1;transl_table=11
NC_007606.1	RefSeq	gene	3870707	3872221	.	-	.	ID=gene4065;Dbxref=GeneID:3797221;Name=SDY_4137;Note=SDY4137;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4137
NC_007606.1	RefSeq	CDS	3870707	3872221	.	-	0	ID=cds3596;Parent=gene4065;Dbxref=Genbank:YP_405538.1,GeneID:3797221;Name=YP_405538.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405538.1;transl_table=11
NC_007606.1	RefSeq	gene	3872408	3872890	.	-	.	ID=gene4066;Dbxref=GeneID:3797222;Name=SDY_4138;Note=SDY4138;gbkey=Gene;gene_biotype=other;locus_tag=SDY_4138
NC_007606.1	RefSeq	region	3872912	3873679	.	+	.	ID=id620;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3872967	3873242	.	+	.	ID=gene4067;Dbxref=GeneID:3797223;Name=insA;Note=SDY4139;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4139
NC_007606.1	RefSeq	CDS	3872967	3873242	.	+	0	ID=cds3597;Parent=gene4067;Dbxref=Genbank:YP_405540.1,GeneID:3797223;Name=YP_405540.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405540.1;transl_table=11
NC_007606.1	RefSeq	gene	3873287	3873664	.	+	.	ID=gene4068;Dbxref=GeneID:3797224;Name=insB;Note=SDY4140;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4140
NC_007606.1	RefSeq	CDS	3873287	3873664	.	+	0	ID=cds3598;Parent=gene4068;Dbxref=Genbank:YP_405541.1,GeneID:3797224;Name=YP_405541.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405541.1;transl_table=11
NC_007606.1	RefSeq	gene	3873880	3875064	.	-	.	ID=gene4069;Dbxref=GeneID:3797225;Name=yicM;Note=SDY4141;gbkey=Gene;gene=yicM;gene_biotype=protein_coding;locus_tag=SDY_4141
NC_007606.1	RefSeq	CDS	3873880	3875064	.	-	0	ID=cds3599;Parent=gene4069;Dbxref=Genbank:YP_405542.2,GeneID:3797225;Name=YP_405542.2;Note=Code: G%3B COG: COG2814;gbkey=CDS;gene=yicM;product=transport protein;protein_id=YP_405542.2;transl_table=11
NC_007606.1	RefSeq	gene	3875292	3875651	.	+	.	ID=gene4070;Dbxref=GeneID:3797226;Name=SDY_4142;Note=SDY4142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4142
NC_007606.1	RefSeq	CDS	3875292	3875651	.	+	0	ID=cds3600;Parent=gene4070;Dbxref=Genbank:YP_405543.1,GeneID:3797226;Name=YP_405543.1;Note=Code: S%3B COG: COG4737;gbkey=CDS;product=hypothetical protein;protein_id=YP_405543.1;transl_table=11
NC_007606.1	RefSeq	gene	3875635	3875958	.	+	.	ID=gene4071;Dbxref=GeneID:3797227;Name=SDY_4143;Note=SDY4143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4143
NC_007606.1	RefSeq	CDS	3875635	3875958	.	+	0	ID=cds3601;Parent=gene4071;Dbxref=Genbank:YP_405544.1,GeneID:3797227;Name=YP_405544.1;Note=Code: K%3B COG: COG2944;gbkey=CDS;product=DNA-binding protein;protein_id=YP_405544.1;transl_table=11
NC_007606.1	RefSeq	gene	3876073	3876552	.	-	.	ID=gene4072;Dbxref=GeneID:3797228;Name=yicN;Note=SDY4144;gbkey=Gene;gene=yicN;gene_biotype=protein_coding;locus_tag=SDY_4144
NC_007606.1	RefSeq	CDS	3876073	3876552	.	-	0	ID=cds3602;Parent=gene4072;Dbxref=Genbank:YP_405545.1,GeneID:3797228;Name=YP_405545.1;gbkey=CDS;gene=yicN;product=hypothetical protein;protein_id=YP_405545.1;transl_table=11
NC_007606.1	RefSeq	gene	3876578	3877961	.	-	.	ID=gene4073;Dbxref=GeneID:3797229;Name=yicO;Note=''SDY4145%3B frameshift%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yicO;gene_biotype=pseudogene;locus_tag=SDY_4145;pseudo=true
NC_007606.1	RefSeq	gene	3878058	3879812	.	+	.	ID=gene4074;Dbxref=GeneID:3797230;Name=yicP;Note=SDY4146;gbkey=Gene;gene=yicP;gene_biotype=protein_coding;locus_tag=SDY_4146
NC_007606.1	RefSeq	CDS	3878058	3879812	.	+	0	ID=cds3603;Parent=gene4074;Dbxref=Genbank:YP_405546.1,GeneID:3797230;Name=YP_405546.1;Note=catalyzes the formation of hypoxanthine from adenine%3B in E. coli this activity has been detected in mutant strains but not in wild type;gbkey=CDS;gene=yicP;product=cryptic adenine deaminase;protein_id=YP_405546.1;transl_table=11
NC_007606.1	RefSeq	gene	3879856	3881247	.	-	.	ID=gene4075;Dbxref=GeneID:3797231;Name=uhpT;Note=SDY4147;gbkey=Gene;gene=uhpT;gene_biotype=protein_coding;locus_tag=SDY_4147
NC_007606.1	RefSeq	CDS	3879856	3881247	.	-	0	ID=cds3604;Parent=gene4075;Dbxref=Genbank:YP_405547.1,GeneID:3797231;Name=YP_405547.1;Note=cytoplasmic membrane protein that functions as a monomer%3B catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate;gbkey=CDS;gene=uhpT;product=sugar phosphate antiporter;protein_id=YP_405547.1;transl_table=11
NC_007606.1	RefSeq	gene	3881385	3882707	.	-	.	ID=gene4076;Dbxref=GeneID:3797232;Name=uhpC;Note=SDY4148;gbkey=Gene;gene=uhpC;gene_biotype=protein_coding;locus_tag=SDY_4148
NC_007606.1	RefSeq	CDS	3881385	3882707	.	-	0	ID=cds3605;Parent=gene4076;Dbxref=Genbank:YP_405548.1,GeneID:3797232;Name=YP_405548.1;Note=membrane protein regulates uhpT expression;gbkey=CDS;gene=uhpC;product=regulatory protein UhpC;protein_id=YP_405548.1;transl_table=11
NC_007606.1	RefSeq	gene	3882714	3884219	.	-	.	ID=gene4077;Dbxref=GeneID:3797233;Name=uhpB;Note=SDY4149;gbkey=Gene;gene=uhpB;gene_biotype=protein_coding;locus_tag=SDY_4149
NC_007606.1	RefSeq	CDS	3882714	3884219	.	-	0	ID=cds3606;Parent=gene4077;Dbxref=Genbank:YP_405549.1,GeneID:3797233;Name=YP_405549.1;Note=Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph;gbkey=CDS;gene=uhpB;product=sensory histidine kinase UhpB;protein_id=YP_405549.1;transl_table=11
NC_007606.1	RefSeq	gene	3884216	3884806	.	-	.	ID=gene4078;Dbxref=GeneID:3797234;Name=uhpA;Note=SDY4150;gbkey=Gene;gene=uhpA;gene_biotype=protein_coding;locus_tag=SDY_4150
NC_007606.1	RefSeq	CDS	3884216	3884806	.	-	0	ID=cds3607;Parent=gene4078;Dbxref=Genbank:YP_405550.1,GeneID:3797234;Name=YP_405550.1;Note=''response regulator in two-component regulatory system wtih UhpB%3B phosphorylated UhpA is a positive activator uhpT%2C a hexose phosphates transporter'';gbkey=CDS;gene=uhpA;product=DNA-binding transcriptional activator UhpA;protein_id=YP_405550.1;transl_table=11
NC_007606.1	RefSeq	region	3885144	3885910	.	+	.	ID=id621;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3885501	3885896	.	+	.	ID=gene4079;Dbxref=GeneID:3797235;Name=SDY_4151;Note=SDY4151;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4151
NC_007606.1	RefSeq	CDS	3885501	3885896	.	+	0	ID=cds3608;Parent=gene4079;Dbxref=Genbank:YP_405551.1,GeneID:3797235;Name=YP_405551.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405551.1;transl_table=11
NC_007606.1	RefSeq	region	3886729	3887494	.	-	.	ID=id622;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3886743	3887138	.	-	.	ID=gene4080;Dbxref=GeneID:3797236;Name=SDY_4152;Note=SDY4152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4152
NC_007606.1	RefSeq	CDS	3886743	3887138	.	-	0	ID=cds3609;Parent=gene4080;Dbxref=Genbank:YP_405552.1,GeneID:3797236;Name=YP_405552.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405552.1;transl_table=11
NC_007606.1	RefSeq	gene	3887165	3887437	.	-	.	ID=gene4081;Dbxref=GeneID:18263164;Name=SDY_4777;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4777
NC_007606.1	RefSeq	CDS	3887165	3887437	.	-	0	ID=cds3610;Parent=gene4081;Dbxref=Genbank:YP_009000850.1,GeneID:18263164;Name=YP_009000850.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000850.1;transl_table=11
NC_007606.1	RefSeq	gene	3888603	3888893	.	-	.	ID=gene4082;Dbxref=GeneID:3799171;Name=ilvN;Note=SDY4154;gbkey=Gene;gene=ilvN;gene_biotype=protein_coding;locus_tag=SDY_4154
NC_007606.1	RefSeq	CDS	3888603	3888893	.	-	0	ID=cds3611;Parent=gene4082;Dbxref=Genbank:YP_405554.1,GeneID:3799171;Name=YP_405554.1;Note=''with IlvB catalyzes the formation of 2-acetolactate from pyruvate%2C the small subunit is required for full activity and valine sensitivity%3B E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates%2C valine sensitivity and affinity for cofactors%3B also known as acetolactate synthase small subunit'';gbkey=CDS;gene=ilvN;product=acetolactate synthase 1 regulatory subunit;protein_id=YP_405554.1;transl_table=11
NC_007606.1	RefSeq	gene	3888897	3890585	.	-	.	ID=gene4083;Dbxref=GeneID:3799172;Name=ilvB;Note=SDY4155;gbkey=Gene;gene=ilvB;gene_biotype=protein_coding;locus_tag=SDY_4155
NC_007606.1	RefSeq	CDS	3888897	3890585	.	-	0	ID=cds3612;Parent=gene4083;Dbxref=Genbank:YP_405555.1,GeneID:3799172;Name=YP_405555.1;Note=Code: EH%3B COG: COG0028;gbkey=CDS;gene=ilvB;product=acetolactate synthase catalytic subunit;protein_id=YP_405555.1;transl_table=11
NC_007606.1	RefSeq	gene	3890691	3890789	.	-	.	ID=gene4084;Dbxref=GeneID:3799173;Name=ivbL;Note=SDY4156;gbkey=Gene;gene=ivbL;gene_biotype=protein_coding;locus_tag=SDY_4156
NC_007606.1	RefSeq	CDS	3890691	3890789	.	-	0	ID=cds3613;Parent=gene4084;Dbxref=Genbank:YP_405556.1,GeneID:3799173;Name=YP_405556.1;gbkey=CDS;gene=ivbL;product=ilvB operon leader peptide;protein_id=YP_405556.1;transl_table=11
NC_007606.1	RefSeq	gene	3891717	3892907	.	+	.	ID=gene4085;Dbxref=GeneID:3799174;Name=emrD;Note=SDY4157;gbkey=Gene;gene=emrD;gene_biotype=protein_coding;locus_tag=SDY_4157
NC_007606.1	RefSeq	CDS	3891717	3892907	.	+	0	ID=cds3614;Parent=gene4085;Dbxref=Genbank:YP_405557.1,GeneID:3799174;Name=YP_405557.1;Note=multidrug efflux protein involved in adaptation to low energy shock;gbkey=CDS;gene=emrD;product=multidrug resistance protein D;protein_id=YP_405557.1;transl_table=11
NC_007606.1	RefSeq	gene	3892915	3893412	.	-	.	ID=gene4086;Dbxref=GeneID:3799175;Name=yidF;Note=SDY4158;gbkey=Gene;gene=yidF;gene_biotype=protein_coding;locus_tag=SDY_4158
NC_007606.1	RefSeq	CDS	3892915	3893412	.	-	0	ID=cds3615;Parent=gene4086;Dbxref=Genbank:YP_405558.1,GeneID:3799175;Name=YP_405558.1;Note=Code: R%3B COG: COG0641;gbkey=CDS;gene=yidF;product=transcriptional regulator;protein_id=YP_405558.1;transl_table=11
NC_007606.1	RefSeq	gene	3893409	3893771	.	-	.	ID=gene4087;Dbxref=GeneID:3799176;Name=yidG;Note=SDY4159;gbkey=Gene;gene=yidG;gene_biotype=protein_coding;locus_tag=SDY_4159
NC_007606.1	RefSeq	CDS	3893409	3893771	.	-	0	ID=cds3616;Parent=gene4087;Dbxref=Genbank:YP_405559.1,GeneID:3799176;Name=YP_405559.1;gbkey=CDS;gene=yidG;product=hypothetical protein;protein_id=YP_405559.1;transl_table=11
NC_007606.1	RefSeq	gene	3893761	3894108	.	-	.	ID=gene4088;Dbxref=GeneID:3799177;Name=yidH;Note=SDY4160;gbkey=Gene;gene=yidH;gene_biotype=protein_coding;locus_tag=SDY_4160
NC_007606.1	RefSeq	CDS	3893761	3894108	.	-	0	ID=cds3617;Parent=gene4088;Dbxref=Genbank:YP_405560.1,GeneID:3799177;Name=YP_405560.1;Note=Code: S%3B COG: COG2149;gbkey=CDS;gene=yidH;product=hypothetical protein;protein_id=YP_405560.1;transl_table=11
NC_007606.1	RefSeq	gene	3894218	3894667	.	+	.	ID=gene4089;Dbxref=GeneID:3799178;Name=yidI;Note=SDY4161;gbkey=Gene;gene=yidI;gene_biotype=protein_coding;locus_tag=SDY_4161
NC_007606.1	RefSeq	CDS	3894218	3894667	.	+	0	ID=cds3618;Parent=gene4089;Dbxref=Genbank:YP_405561.1,GeneID:3799178;Name=YP_405561.1;gbkey=CDS;gene=yidI;product=hypothetical protein;protein_id=YP_405561.1;transl_table=11
NC_007606.1	RefSeq	gene	3894714	3896207	.	-	.	ID=gene4090;Dbxref=GeneID:3799179;Name=yidJ;Note=SDY4162;gbkey=Gene;gene=yidJ;gene_biotype=protein_coding;locus_tag=SDY_4162
NC_007606.1	RefSeq	CDS	3894714	3896207	.	-	0	ID=cds3619;Parent=gene4090;Dbxref=Genbank:YP_405562.1,GeneID:3799179;Name=YP_405562.1;Note=Code: P%3B COG: COG3119;gbkey=CDS;gene=yidJ;product=sulfatase;protein_id=YP_405562.1;transl_table=11
NC_007606.1	RefSeq	region	3897156	3897923	.	-	.	ID=id623;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3897171	3897548	.	-	.	ID=gene4091;Dbxref=GeneID:3799180;Name=insB;Note=SDY4163;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4163
NC_007606.1	RefSeq	CDS	3897171	3897548	.	-	0	ID=cds3620;Parent=gene4091;Dbxref=Genbank:YP_405563.1,GeneID:3799180;Name=YP_405563.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion sequence element IS1 transposase;protein_id=YP_405563.1;transl_table=11
NC_007606.1	RefSeq	gene	3897593	3897868	.	-	.	ID=gene4092;Dbxref=GeneID:3799181;Name=insA;Note=SDY4164;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4164
NC_007606.1	RefSeq	CDS	3897593	3897868	.	-	0	ID=cds3621;Parent=gene4092;Dbxref=Genbank:YP_405564.1,GeneID:3799181;Name=YP_405564.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405564.1;transl_table=11
NC_007606.1	RefSeq	region	3899371	3900143	.	+	.	ID=id624;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3899435	3899707	.	+	.	ID=gene4093;Dbxref=GeneID:18263165;Name=SDY_4778;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4778
NC_007606.1	RefSeq	CDS	3899435	3899707	.	+	0	ID=cds3622;Parent=gene4093;Dbxref=Genbank:YP_009000851.1,GeneID:18263165;Name=YP_009000851.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000851.1;transl_table=11
NC_007606.1	RefSeq	gene	3899734	3900129	.	+	.	ID=gene4094;Dbxref=GeneID:3799184;Name=SDY_4167;Note=SDY4167;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4167
NC_007606.1	RefSeq	CDS	3899734	3900129	.	+	0	ID=cds3623;Parent=gene4094;Dbxref=Genbank:YP_405565.1,GeneID:3799184;Name=YP_405565.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405565.1;transl_table=11
NC_007606.1	RefSeq	gene	3900527	3901849	.	-	.	ID=gene4095;Dbxref=GeneID:3799185;Name=SDY_4168;Note=SDY4168;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4168
NC_007606.1	RefSeq	CDS	3900527	3901849	.	-	0	ID=cds3624;Parent=gene4095;Dbxref=Genbank:YP_405566.1,GeneID:3799185;Name=YP_405566.1;Note=Code: G%3B COG: COG1486;gbkey=CDS;product=6-phospho-beta-glucosidase;protein_id=YP_405566.1;transl_table=11
NC_007606.1	RefSeq	gene	3901849	3903726	.	-	.	ID=gene4096;Dbxref=GeneID:3799186;Name=glvC;Note=SDY4169%3B contains in-frame stop codon%3B original product: Phosphotransferase system IIBC component;gbkey=Gene;gene=glvC;gene_biotype=pseudogene;locus_tag=SDY_4169;pseudo=true
NC_007606.1	RefSeq	gene	3903761	3904477	.	+	.	ID=gene4097;Dbxref=GeneID:3799187;Name=yidP;Note=SDY4170;gbkey=Gene;gene=yidP;gene_biotype=protein_coding;locus_tag=SDY_4170
NC_007606.1	RefSeq	CDS	3903761	3904477	.	+	0	ID=cds3625;Parent=gene4097;Dbxref=Genbank:YP_405567.1,GeneID:3799187;Name=YP_405567.1;Note=Code: K%3B COG: COG2188;gbkey=CDS;gene=yidP;product=transcriptional regulator;protein_id=YP_405567.1;transl_table=11
NC_007606.1	RefSeq	gene	3904474	3906135	.	-	.	ID=gene4098;Dbxref=GeneID:3799188;Name=yidE;Note=SDY4171;gbkey=Gene;gene=yidE;gene_biotype=protein_coding;locus_tag=SDY_4171
NC_007606.1	RefSeq	CDS	3904474	3906135	.	-	0	ID=cds3626;Parent=gene4098;Dbxref=Genbank:YP_405568.2,GeneID:3799188;Name=YP_405568.2;Note=Code: R%3B COG: COG2985;gbkey=CDS;gene=yidE;product=hypothetical protein;protein_id=YP_405568.2;transl_table=11
NC_007606.1	RefSeq	gene	3906331	3906759	.	-	.	ID=gene4099;Dbxref=GeneID:3799189;Name=ibpB;Note=SDY4172;gbkey=Gene;gene=ibpB;gene_biotype=protein_coding;locus_tag=SDY_4172
NC_007606.1	RefSeq	CDS	3906331	3906759	.	-	0	ID=cds3627;Parent=gene4099;Dbxref=Genbank:YP_405569.2,GeneID:3799189;Name=YP_405569.2;Note=''16 kDa heat shock protein B%3B associates with aggregated proteins%2C together with ibpA%2C to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress%3B ATP-independent'';gbkey=CDS;gene=ibpB;product=heat shock chaperone IbpB;protein_id=YP_405569.2;transl_table=11
NC_007606.1	RefSeq	gene	3906871	3907284	.	-	.	ID=gene4100;Dbxref=GeneID:3799825;Name=ibpA;Note=SDY4173;gbkey=Gene;gene=ibpA;gene_biotype=protein_coding;locus_tag=SDY_4173
NC_007606.1	RefSeq	CDS	3906871	3907284	.	-	0	ID=cds3628;Parent=gene4100;Dbxref=Genbank:YP_405570.1,GeneID:3799825;Name=YP_405570.1;Note=with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress;gbkey=CDS;gene=ibpA;product=heat shock protein IbpA;protein_id=YP_405570.1;transl_table=11
NC_007606.1	RefSeq	gene	3907590	3907922	.	+	.	ID=gene4101;Dbxref=GeneID:3799826;Name=yidQ;Note=SDY4174;gbkey=Gene;gene=yidQ;gene_biotype=protein_coding;locus_tag=SDY_4174
NC_007606.1	RefSeq	CDS	3907590	3907922	.	+	0	ID=cds3629;Parent=gene4101;Dbxref=Genbank:YP_405571.2,GeneID:3799826;Name=YP_405571.2;Note=Code: R%3B COG: COG5645;gbkey=CDS;gene=yidQ;product=hypothetical protein;protein_id=YP_405571.2;transl_table=11
NC_007606.1	RefSeq	gene	3907924	3909168	.	-	.	ID=gene4102;Dbxref=GeneID:3799827;Name=yidR;Note=SDY4175;gbkey=Gene;gene=yidR;gene_biotype=protein_coding;locus_tag=SDY_4175
NC_007606.1	RefSeq	CDS	3907924	3909168	.	-	0	ID=cds3630;Parent=gene4102;Dbxref=Genbank:YP_405572.1,GeneID:3799827;Name=YP_405572.1;gbkey=CDS;gene=yidR;product=hypothetical protein;protein_id=YP_405572.1;transl_table=11
NC_007606.1	RefSeq	gene	3909233	3910297	.	+	.	ID=gene4103;Dbxref=GeneID:3799828;Name=yidS;Note=SDY4176;gbkey=Gene;gene=yidS;gene_biotype=protein_coding;locus_tag=SDY_4176
NC_007606.1	RefSeq	CDS	3909233	3910297	.	+	0	ID=cds3631;Parent=gene4103;Dbxref=Genbank:YP_405573.2,GeneID:3799828;Name=YP_405573.2;Note=FAD/NAD(P)-binding domain;gbkey=CDS;gene=yidS;product=oxidoreductase;protein_id=YP_405573.2;transl_table=11
NC_007606.1	RefSeq	gene	3910600	3911037	.	+	.	ID=gene4104;Dbxref=GeneID:3799829;Name=yidX;Note=SDY4177%3B truncated%3B original product:  replicase EC 2.7.-;gbkey=Gene;gene=yidX;gene_biotype=pseudogene;locus_tag=SDY_4177;pseudo=true
NC_007606.1	RefSeq	region	3911034	3911800	.	+	.	ID=id625;gbkey=mobile_element;gene=yidX
NC_007606.1	RefSeq	gene	3911091	3911363	.	+	.	ID=gene4105;Dbxref=GeneID:18263166;Name=SDY_4779;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4779
NC_007606.1	RefSeq	CDS	3911091	3911363	.	+	0	ID=cds3632;Parent=gene4105;Dbxref=Genbank:YP_009000852.1,GeneID:18263166;Name=YP_009000852.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000852.1;transl_table=11
NC_007606.1	RefSeq	gene	3912019	3912831	.	-	.	ID=gene4106;Dbxref=GeneID:3799831;Name=yidA;Note=SDY4179;gbkey=Gene;gene=yidA;gene_biotype=protein_coding;locus_tag=SDY_4179
NC_007606.1	RefSeq	CDS	3912019	3912831	.	-	0	ID=cds3633;Parent=gene4106;Dbxref=Genbank:YP_405575.1,GeneID:3799831;Name=YP_405575.1;Note=''YidA%3B catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate)%2C mannose 1-phosphate and p-nitrophenyl phosphate%3B hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form%3B member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins'';gbkey=CDS;gene=yidA;product=sugar phosphatase;protein_id=YP_405575.1;transl_table=11
NC_007606.1	RefSeq	gene	3912946	3913344	.	-	.	ID=gene4107;Dbxref=GeneID:3799832;Name=yidB;Note=SDY4180;gbkey=Gene;gene=yidB;gene_biotype=protein_coding;locus_tag=SDY_4180
NC_007606.1	RefSeq	CDS	3912946	3913344	.	-	0	ID=cds3634;Parent=gene4107;Dbxref=Genbank:YP_405576.1,GeneID:3799832;Name=YP_405576.1;Note=Code: S%3B COG: COG3753;gbkey=CDS;gene=yidB;product=hypothetical protein;protein_id=YP_405576.1;transl_table=11
NC_007606.1	RefSeq	gene	3913584	3915998	.	-	.	ID=gene4108;Dbxref=GeneID:3799833;Name=gyrB;Note=SDY4181;gbkey=Gene;gene=gyrB;gene_biotype=protein_coding;locus_tag=SDY_4181
NC_007606.1	RefSeq	CDS	3913584	3915998	.	-	0	ID=cds3635;Parent=gene4108;Dbxref=Genbank:YP_405577.1,GeneID:3799833;Name=YP_405577.1;Note=negatively supercoils closed circular double-stranded DNA;gbkey=CDS;gene=gyrB;product=DNA gyrase subunit B;protein_id=YP_405577.1;transl_table=11
NC_007606.1	RefSeq	gene	3916027	3917100	.	-	.	ID=gene4109;Dbxref=GeneID:3799834;Name=recF;Note=SDY4182;gbkey=Gene;gene=recF;gene_biotype=protein_coding;locus_tag=SDY_4182
NC_007606.1	RefSeq	CDS	3916027	3917100	.	-	0	ID=cds3636;Parent=gene4109;Dbxref=Genbank:YP_405578.1,GeneID:3799834;Name=YP_405578.1;Note=''Required for DNA replication%3B binds preferentially to single-stranded%2C linear DNA'';gbkey=CDS;gene=recF;product=recombination protein F;protein_id=YP_405578.1;transl_table=11
NC_007606.1	RefSeq	gene	3917100	3918200	.	-	.	ID=gene4110;Dbxref=GeneID:3799835;Name=dnaN;Note=SDY4183;gbkey=Gene;gene=dnaN;gene_biotype=protein_coding;locus_tag=SDY_4183
NC_007606.1	RefSeq	CDS	3917100	3918200	.	-	0	ID=cds3637;Parent=gene4110;Dbxref=Genbank:YP_405579.1,GeneID:3799835;Name=YP_405579.1;Note=binds the polymerase to DNA and acts as a sliding clamp;gbkey=CDS;gene=dnaN;product=DNA polymerase III subunit beta;protein_id=YP_405579.1;transl_table=11
NC_007606.1	RefSeq	gene	3918205	3919608	.	-	.	ID=gene4111;Dbxref=GeneID:3799836;Name=dnaA;Note=SDY4184;gbkey=Gene;gene=dnaA;gene_biotype=protein_coding;locus_tag=SDY_4184
NC_007606.1	RefSeq	CDS	3918205	3919608	.	-	0	ID=cds3638;Parent=gene4111;Dbxref=Genbank:YP_405580.1,GeneID:3799836;Name=YP_405580.1;Note=binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication%3B can also affect transcription of multiple genes including itself.;gbkey=CDS;gene=dnaA;product=chromosome replication initiator DnaA;protein_id=YP_405580.1;transl_table=11
NC_007606.1	RefSeq	gene	3920215	3920355	.	+	.	ID=gene4112;Dbxref=GeneID:3799837;Name=rpmH;Note=SDY4185;gbkey=Gene;gene=rpmH;gene_biotype=protein_coding;locus_tag=SDY_4185
NC_007606.1	RefSeq	CDS	3920215	3920355	.	+	0	ID=cds3639;Parent=gene4112;Dbxref=Genbank:YP_405581.1,GeneID:3799837;Name=YP_405581.1;Note=in Escherichia coli transcription of this gene is enhanced by polyamines;gbkey=CDS;gene=rpmH;product=50S ribosomal protein L34;protein_id=YP_405581.1;transl_table=11
NC_007606.1	RefSeq	gene	3920372	3920731	.	+	.	ID=gene4113;Dbxref=GeneID:3799838;Name=rnpA;Note=SDY4186;gbkey=Gene;gene=rnpA;gene_biotype=protein_coding;locus_tag=SDY_4186
NC_007606.1	RefSeq	CDS	3920372	3920731	.	+	0	ID=cds3640;Parent=gene4113;Dbxref=Genbank:YP_405582.1,GeneID:3799838;Name=YP_405582.1;Note=protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus%3B this enzyme also cleaves other RNA substrates;gbkey=CDS;gene=rnpA;product=ribonuclease P;protein_id=YP_405582.1;transl_table=11
NC_007606.1	RefSeq	gene	3920695	3920952	.	+	.	ID=gene4114;Dbxref=GeneID:3799839;Name=yidD;Note=SDY4187;gbkey=Gene;gene=yidD;gene_biotype=protein_coding;locus_tag=SDY_4187
NC_007606.1	RefSeq	CDS	3920695	3920952	.	+	0	ID=cds3641;Parent=gene4114;Dbxref=Genbank:YP_405583.1,GeneID:3799839;Name=YP_405583.1;Note=Code: S%3B COG: COG0759;gbkey=CDS;gene=yidD;product=hypothetical protein;protein_id=YP_405583.1;transl_table=11
NC_007606.1	RefSeq	gene	3920955	3922601	.	+	.	ID=gene4115;Dbxref=GeneID:3799840;Name=yidC;Note=SDY4188;gbkey=Gene;gene=yidC;gene_biotype=protein_coding;locus_tag=SDY_4188
NC_007606.1	RefSeq	CDS	3920955	3922601	.	+	0	ID=cds3642;Parent=gene4115;Dbxref=Genbank:YP_405584.1,GeneID:3799840;Name=YP_405584.1;Note=functions to insert inner membrane proteins into the IM in Escherichia coli%3B interacts with transmembrane segments%3B functions in both Sec-dependent and -independent membrane insertion%3B similar to Oxa1p in mitochondria;gbkey=CDS;gene=yidC;product=inner membrane protein translocase component YidC;protein_id=YP_405584.1;transl_table=11
NC_007606.1	RefSeq	gene	3922707	3924071	.	+	.	ID=gene4116;Dbxref=GeneID:3799841;Name=trmE;Note=SDY4189;gbkey=Gene;gene=trmE;gene_biotype=protein_coding;gene_synonym=mnmE,thdF;locus_tag=SDY_4189
NC_007606.1	RefSeq	CDS	3922707	3924071	.	+	0	ID=cds3643;Parent=gene4116;Dbxref=Genbank:YP_405585.1,GeneID:3799841;Name=YP_405585.1;Note=''in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine%2C which is found in the wobble position of some tRNAs and affects ribosomal frameshifting%3B shows potassium-dependent dimerization and GTP hydrolysis%3B also involved in regulation of glutamate-dependent acid resistance and activation of gadE'';gbkey=CDS;gene=trmE;product=tRNA modification GTPase TrmE;protein_id=YP_405585.1;transl_table=11
NC_007606.1	RefSeq	region	3924303	3925068	.	-	.	ID=id626;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3924317	3924712	.	-	.	ID=gene4117;Dbxref=GeneID:3799842;Name=SDY_4190;Note=SDY4190;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4190
NC_007606.1	RefSeq	CDS	3924317	3924712	.	-	0	ID=cds3644;Parent=gene4117;Dbxref=Genbank:YP_405586.1,GeneID:3799842;Name=YP_405586.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405586.1;transl_table=11
NC_007606.1	RefSeq	gene	3924739	3925011	.	-	.	ID=gene4118;Dbxref=GeneID:18263167;Name=SDY_4780;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4780
NC_007606.1	RefSeq	CDS	3924739	3925011	.	-	0	ID=cds3645;Parent=gene4118;Dbxref=Genbank:YP_009000853.1,GeneID:18263167;Name=YP_009000853.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000853.1;transl_table=11
NC_007606.1	RefSeq	gene	3925047	3925649	.	-	.	ID=gene4119;Dbxref=GeneID:3799843;Name=SDY_4191;Note=SDY4191;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4191;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	3925667	3926406	.	-	.	ID=id627;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3925682	3926059	.	-	.	ID=gene4120;Dbxref=GeneID:3798021;Name=insB;Note=SDY4192;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4192
NC_007606.1	RefSeq	CDS	3925682	3926059	.	-	0	ID=cds3646;Parent=gene4120;Dbxref=Genbank:YP_405588.1,GeneID:3798021;Name=YP_405588.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405588.1;transl_table=11
NC_007606.1	RefSeq	gene	3926104	3926379	.	-	.	ID=gene4121;Dbxref=GeneID:3798022;Name=insA;Note=SDY4193;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4193
NC_007606.1	RefSeq	CDS	3926104	3926379	.	-	0	ID=cds3647;Parent=gene4121;Dbxref=Genbank:YP_405589.1,GeneID:3798022;Name=YP_405589.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405589.1;transl_table=11
NC_007606.1	RefSeq	gene	3926401	3927163	.	-	.	ID=gene4122;Dbxref=GeneID:3798023;Name=SDY_4194;Note=SDY4194;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4194;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	3926407	3927645	.	-	.	ID=id628;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3927304	3927606	.	-	.	ID=gene4123;Dbxref=GeneID:3798024;Name=SDY_4195;Note=SDY4195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4195
NC_007606.1	RefSeq	CDS	3927304	3927606	.	-	0	ID=cds3648;Parent=gene4123;Dbxref=Genbank:YP_405591.1,GeneID:3798024;Name=YP_405591.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_405591.1;transl_table=11
NC_007606.1	RefSeq	region	3927645	3928413	.	+	.	ID=id629;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3927700	3927975	.	+	.	ID=gene4124;Dbxref=GeneID:3798025;Name=insA;Note=SDY4196;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4196
NC_007606.1	RefSeq	CDS	3927700	3927975	.	+	0	ID=cds3649;Parent=gene4124;Dbxref=Genbank:YP_405592.1,GeneID:3798025;Name=YP_405592.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element iso-IS1d protein InsA;protein_id=YP_405592.1;transl_table=11
NC_007606.1	RefSeq	gene	3928020	3928397	.	+	.	ID=gene4125;Dbxref=GeneID:3798026;Name=insB;Note=SDY4197;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4197
NC_007606.1	RefSeq	CDS	3928020	3928397	.	+	0	ID=cds3650;Parent=gene4125;Dbxref=Genbank:YP_405593.1,GeneID:3798026;Name=YP_405593.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405593.1;transl_table=11
NC_007606.1	RefSeq	gene	3928581	3929246	.	-	.	ID=gene4126;Dbxref=GeneID:3798027;Name=yieH;Note=SDY4198;gbkey=Gene;gene=yieH;gene_biotype=protein_coding;locus_tag=SDY_4198
NC_007606.1	RefSeq	CDS	3928581	3929246	.	-	0	ID=cds3651;Parent=gene4126;Dbxref=Genbank:YP_405594.1,GeneID:3798027;Name=YP_405594.1;Note=''YieH%3B catalyzes the dephosphorylation of phosphoenolpyruvate%2C AMP and p-nitrophenyl phosphate%3B purine and pyrimidine nucleotides are secondary substrates%3B member of the haloacid dehalogenase-like hydrolases superfamily'';gbkey=CDS;gene=yieH;product=6-phosphogluconate phosphatase;protein_id=YP_405594.1;transl_table=11
NC_007606.1	RefSeq	gene	3929413	3930750	.	+	.	ID=gene4127;Dbxref=GeneID:3798028;Name=yieG;Note=SDY4199;gbkey=Gene;gene=yieG;gene_biotype=protein_coding;locus_tag=SDY_4199
NC_007606.1	RefSeq	CDS	3929413	3930750	.	+	0	ID=cds3652;Parent=gene4127;Dbxref=Genbank:YP_405595.1,GeneID:3798028;Name=YP_405595.1;Note=Code: R%3B COG: COG2252;gbkey=CDS;gene=yieG;product=membrane/transport protein;protein_id=YP_405595.1;transl_table=11
NC_007606.1	RefSeq	gene	3930804	3931370	.	-	.	ID=gene4128;Dbxref=GeneID:3798029;Name=yieF;Note=''SDY4200%3B contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yieF;gene_biotype=pseudogene;locus_tag=SDY_4200;pseudo=true
NC_007606.1	RefSeq	gene	3931392	3932153	.	-	.	ID=gene4129;Dbxref=GeneID:3798030;Name=yieE;Note=SDY4201;gbkey=Gene;gene=yieE;gene_biotype=protein_coding;locus_tag=SDY_4201
NC_007606.1	RefSeq	CDS	3931392	3932153	.	-	0	ID=cds3653;Parent=gene4129;Dbxref=Genbank:YP_405596.1,GeneID:3798030;Name=YP_405596.1;Note=Code: H%3B COG: COG2091;gbkey=CDS;gene=yieE;product=hypothetical protein;protein_id=YP_405596.1;transl_table=11
NC_007606.1	RefSeq	gene	3932298	3933257	.	-	.	ID=gene4130;Dbxref=GeneID:3798031;Name=yidZ;Note=SDY4202;gbkey=Gene;gene=yidZ;gene_biotype=protein_coding;locus_tag=SDY_4202
NC_007606.1	RefSeq	CDS	3932298	3933257	.	-	0	ID=cds3654;Parent=gene4130;Dbxref=Genbank:YP_405597.1,GeneID:3798031;Name=YP_405597.1;Note=Involved in anaerobic NO protection;gbkey=CDS;gene=yidZ;product=DNA-binding transcriptional regulator YidZ;protein_id=YP_405597.1;transl_table=11
NC_007606.1	RefSeq	gene	3933232	3934407	.	-	.	ID=gene4131;Dbxref=GeneID:3798032;Name=yidY;Note=SDY4203;gbkey=Gene;gene=yidY;gene_biotype=protein_coding;locus_tag=SDY_4203
NC_007606.1	RefSeq	CDS	3933232	3934407	.	-	0	ID=cds3655;Parent=gene4131;Dbxref=Genbank:YP_405598.1,GeneID:3798032;Name=YP_405598.1;Note=Confers resistance to chloramphenicol;gbkey=CDS;gene=yidY;product=multidrug efflux system protein MdtL;protein_id=YP_405598.1;transl_table=11
NC_007606.1	RefSeq	gene	3934539	3935726	.	-	.	ID=gene4132;Dbxref=GeneID:3798033;Name=tnaB;Note=SDY4204;gbkey=Gene;gene=tnaB;gene_biotype=protein_coding;locus_tag=SDY_4204
NC_007606.1	RefSeq	CDS	3934539	3935726	.	-	0	ID=cds3656;Parent=gene4132;Dbxref=Genbank:YP_405599.1,GeneID:3798033;Name=YP_405599.1;Note=Code: E%3B COG: COG0814;gbkey=CDS;gene=tnaB;product=low affinity tryptophan permease;protein_id=YP_405599.1;transl_table=11
NC_007606.1	RefSeq	region	3935690	3937020	.	-	.	ID=id630;gbkey=mobile_element;gene=tnaB
NC_007606.1	RefSeq	gene	3935701	3936606	.	-	.	ID=gene4133;Dbxref=GeneID:3798034;Name=SDY_4205;Note=SDY4205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4205
NC_007606.1	RefSeq	CDS	3935701	3936606	.	-	0	ID=cds3657;Parent=gene4133;Dbxref=Genbank:YP_405600.2,GeneID:3798034;Name=YP_405600.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_405600.2;transl_table=11
NC_007606.1	RefSeq	gene	3936564	3936929	.	-	.	ID=gene4134;Dbxref=GeneID:3798036;Name=SDY_4207;Note=SDY4207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4207
NC_007606.1	RefSeq	CDS	3936564	3936929	.	-	0	ID=cds3658;Parent=gene4134;Dbxref=Genbank:YP_405601.1,GeneID:3798036;Name=YP_405601.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_405601.1;transl_table=11
NC_007606.1	RefSeq	region	3937133	3937899	.	+	.	ID=id631;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3937190	3937462	.	+	.	ID=gene4135;Dbxref=GeneID:18263168;Name=SDY_4781;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4781
NC_007606.1	RefSeq	CDS	3937190	3937462	.	+	0	ID=cds3659;Parent=gene4135;Dbxref=Genbank:YP_009000854.1,GeneID:18263168;Name=YP_009000854.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000854.1;transl_table=11
NC_007606.1	RefSeq	gene	3937489	3937884	.	+	.	ID=gene4136;Dbxref=GeneID:3798038;Name=SDY_4209;Note=SDY4209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4209
NC_007606.1	RefSeq	CDS	3937489	3937884	.	+	0	ID=cds3660;Parent=gene4136;Dbxref=Genbank:YP_405604.1,GeneID:3798038;Name=YP_405604.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1d protein InsB;protein_id=YP_405604.1;transl_table=11
NC_007606.1	RefSeq	gene	3937859	3941500	.	-	.	ID=gene4137;Dbxref=GeneID:3798039;Name=rhsA;Note=SDY4210;gbkey=Gene;gene=rhsA;gene_biotype=protein_coding;locus_tag=SDY_4210
NC_007606.1	RefSeq	CDS	3937859	3941500	.	-	0	ID=cds3661;Parent=gene4137;Dbxref=Genbank:YP_405605.1,GeneID:3798039;Name=YP_405605.1;Note=Code: M%3B COG: COG3209;gbkey=CDS;gene=rhsA;product=rhs element protein RhsA;protein_id=YP_405605.1;transl_table=11
NC_007606.1	RefSeq	gene	3941729	3942337	.	+	.	ID=gene4138;Dbxref=GeneID:3798040;Name=yibF;Note=SDY4211;gbkey=Gene;gene=yibF;gene_biotype=protein_coding;locus_tag=SDY_4211
NC_007606.1	RefSeq	CDS	3941729	3942337	.	+	0	ID=cds3662;Parent=gene4138;Dbxref=Genbank:YP_405606.1,GeneID:3798040;Name=YP_405606.1;Note=Code: O%3B COG: COG0625;gbkey=CDS;gene=yibF;product=glutathione S-transferase;protein_id=YP_405606.1;transl_table=11
NC_007606.1	RefSeq	gene	3942435	3943826	.	+	.	ID=gene4139;Dbxref=GeneID:3797256;Name=selA;Note=SDY4212;gbkey=Gene;gene=selA;gene_biotype=protein_coding;locus_tag=SDY_4212
NC_007606.1	RefSeq	CDS	3942435	3943826	.	+	0	ID=cds3663;Parent=gene4139;Dbxref=Genbank:YP_405607.1,GeneID:3797256;Name=YP_405607.1;Note=catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis;gbkey=CDS;gene=selA;product=selenocysteine synthase;protein_id=YP_405607.1;transl_table=11
NC_007606.1	RefSeq	gene	3943823	3945667	.	+	.	ID=gene4140;Dbxref=GeneID:3797257;Name=selB;Note=SDY4213;gbkey=Gene;gene=selB;gene_biotype=protein_coding;locus_tag=SDY_4213
NC_007606.1	RefSeq	CDS	3943823	3945667	.	+	0	ID=cds3664;Parent=gene4140;Dbxref=Genbank:YP_405608.1,GeneID:3797257;Name=YP_405608.1;Note=Code: J%3B COG: COG3276;gbkey=CDS;gene=selB;product=selenocysteinyl-tRNA-specific translation factor;protein_id=YP_405608.1;transl_table=11
NC_007606.1	RefSeq	region	3945708	3946477	.	+	.	ID=id632;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3945769	3946041	.	+	.	ID=gene4141;Dbxref=GeneID:18263169;Name=SDY_4782;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4782
NC_007606.1	RefSeq	CDS	3945769	3946041	.	+	0	ID=cds3665;Parent=gene4141;Dbxref=Genbank:YP_009000855.1,GeneID:18263169;Name=YP_009000855.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000855.1;transl_table=11
NC_007606.1	RefSeq	region	3947306	3948073	.	+	.	ID=id633;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3947361	3947636	.	+	.	ID=gene4142;Dbxref=GeneID:3797259;Name=insA;Note=SDY4215;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4215
NC_007606.1	RefSeq	CDS	3947361	3947636	.	+	0	ID=cds3666;Parent=gene4142;Dbxref=Genbank:YP_405610.1,GeneID:3797259;Name=YP_405610.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405610.1;transl_table=11
NC_007606.1	RefSeq	gene	3947681	3948058	.	+	.	ID=gene4143;Dbxref=GeneID:3797260;Name=insB;Note=SDY4216;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4216
NC_007606.1	RefSeq	CDS	3947681	3948058	.	+	0	ID=cds3667;Parent=gene4143;Dbxref=Genbank:YP_405611.1,GeneID:3797260;Name=YP_405611.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405611.1;transl_table=11
NC_007606.1	RefSeq	gene	3948665	3950139	.	+	.	ID=gene4144;Dbxref=GeneID:3797261;Name=xylE;Note=SDY4217%3B contains in-frame stop codon%3B original product: xylose-proton symport;gbkey=Gene;gene=xylE;gene_biotype=pseudogene;locus_tag=SDY_4217;pseudo=true
NC_007606.1	RefSeq	gene	3950183	3950593	.	-	.	ID=gene4145;Dbxref=GeneID:3797262;Name=yjbA;Note=SDY4218;gbkey=Gene;gene=yjbA;gene_biotype=protein_coding;locus_tag=SDY_4218
NC_007606.1	RefSeq	CDS	3950183	3950593	.	-	0	ID=cds3668;Parent=gene4145;Dbxref=Genbank:YP_405612.1,GeneID:3797262;Name=YP_405612.1;Note=Code: S%3B COG: COG3223;gbkey=CDS;gene=yjbA;product=phosphate-starvation-inducible protein PsiE;protein_id=YP_405612.1;transl_table=11
NC_007606.1	RefSeq	gene	3951187	3953184	.	-	.	ID=gene4146;Dbxref=GeneID:3797263;Name=yjbH;Note=''SDY4219%3B frameshift%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yjbH;gene_biotype=pseudogene;locus_tag=SDY_4219;pseudo=true
NC_007606.1	RefSeq	gene	3953184	3953921	.	-	.	ID=gene4147;Dbxref=GeneID:3797264;Name=yjbG;Note=SDY4220;gbkey=Gene;gene=yjbG;gene_biotype=protein_coding;locus_tag=SDY_4220
NC_007606.1	RefSeq	CDS	3953184	3953921	.	-	0	ID=cds3669;Parent=gene4147;Dbxref=Genbank:YP_405613.1,GeneID:3797264;Name=YP_405613.1;gbkey=CDS;gene=yjbG;product=hypothetical protein;protein_id=YP_405613.1;transl_table=11
NC_007606.1	RefSeq	gene	3953918	3954586	.	-	.	ID=gene4148;Dbxref=GeneID:3797265;Name=yjbF;Note=SDY4221;gbkey=Gene;gene=yjbF;gene_biotype=protein_coding;locus_tag=SDY_4221
NC_007606.1	RefSeq	CDS	3953918	3954586	.	-	0	ID=cds3670;Parent=gene4148;Dbxref=Genbank:YP_405614.1,GeneID:3797265;Name=YP_405614.1;gbkey=CDS;gene=yjbF;product=hypothetical protein;protein_id=YP_405614.1;transl_table=11
NC_007606.1	RefSeq	gene	3954670	3954912	.	-	.	ID=gene4149;Dbxref=GeneID:3797266;Name=yjbE;Note=SDY4222;gbkey=Gene;gene=yjbE;gene_biotype=protein_coding;locus_tag=SDY_4222
NC_007606.1	RefSeq	CDS	3954670	3954912	.	-	0	ID=cds3671;Parent=gene4149;Dbxref=Genbank:YP_405615.1,GeneID:3797266;Name=YP_405615.1;gbkey=CDS;gene=yjbE;product=hypothetical protein;protein_id=YP_405615.1;transl_table=11
NC_007606.1	RefSeq	region	3955281	3956047	.	-	.	ID=id634;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3955296	3955691	.	-	.	ID=gene4150;Dbxref=GeneID:3797267;Name=SDY_4223;Note=SDY4223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4223
NC_007606.1	RefSeq	CDS	3955296	3955691	.	-	0	ID=cds3672;Parent=gene4150;Dbxref=Genbank:YP_405616.1,GeneID:3797267;Name=YP_405616.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405616.1;transl_table=11
NC_007606.1	RefSeq	gene	3955718	3955990	.	-	.	ID=gene4151;Dbxref=GeneID:18263170;Name=SDY_4783;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4783
NC_007606.1	RefSeq	CDS	3955718	3955990	.	-	0	ID=cds3673;Parent=gene4151;Dbxref=Genbank:YP_009000856.1,GeneID:18263170;Name=YP_009000856.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000856.1;transl_table=11
NC_007606.1	RefSeq	gene	3956304	3957512	.	+	.	ID=gene4152;Dbxref=GeneID:3797269;Name=SDY_4225;Note=SDY4225;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4225
NC_007606.1	RefSeq	CDS	3956304	3957512	.	+	0	ID=cds3674;Parent=gene4152;Dbxref=Genbank:YP_405618.1,GeneID:3797269;Name=YP_405618.1;gbkey=CDS;product=insertion sequence element IS1294 transposase;protein_id=YP_405618.1;transl_table=11
NC_007606.1	RefSeq	region	3956331	3957683	.	+	.	ID=id635;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3957906	3959555	.	-	.	ID=gene4153;Dbxref=GeneID:3797270;Name=pgi;Note=SDY4226;gbkey=Gene;gene=pgi;gene_biotype=protein_coding;locus_tag=SDY_4226
NC_007606.1	RefSeq	CDS	3957906	3959555	.	-	0	ID=cds3675;Parent=gene4153;Dbxref=Genbank:YP_405619.1,GeneID:3797270;Name=YP_405619.1;Note=functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis%3B catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate%3B member of PGI family;gbkey=CDS;gene=pgi;product=glucose-6-phosphate isomerase;protein_id=YP_405619.1;transl_table=11
NC_007606.1	RefSeq	gene	3960080	3961429	.	+	.	ID=gene4154;Dbxref=GeneID:3797271;Name=lysC;Note=SDY4227;gbkey=Gene;gene=lysC;gene_biotype=protein_coding;locus_tag=SDY_4227
NC_007606.1	RefSeq	CDS	3960080	3961429	.	+	0	ID=cds3676;Parent=gene4154;Dbxref=Genbank:YP_405620.1,GeneID:3797271;Name=YP_405620.1;Note=catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP%3B functions in amino acid biosynthesis%3B lysine sensitive;gbkey=CDS;gene=lysC;product=aspartate kinase;protein_id=YP_405620.1;transl_table=11
NC_007606.1	RefSeq	region	3961495	3962825	.	-	.	ID=id636;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3961506	3962411	.	-	.	ID=gene4155;Dbxref=GeneID:3797272;Name=SDY_4228;Note=SDY4228;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4228
NC_007606.1	RefSeq	CDS	3961506	3962411	.	-	0	ID=cds3677;Parent=gene4155;Dbxref=Genbank:YP_405621.2,GeneID:3797272;Name=YP_405621.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_405621.2;transl_table=11
NC_007606.1	RefSeq	gene	3962369	3962734	.	-	.	ID=gene4156;Dbxref=GeneID:3797273;Name=SDY_4229;Note=SDY4229;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4229
NC_007606.1	RefSeq	CDS	3962369	3962734	.	-	0	ID=cds3678;Parent=gene4156;Dbxref=Genbank:YP_405622.1,GeneID:3797273;Name=YP_405622.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_405622.1;transl_table=11
NC_007606.1	RefSeq	gene	3963269	3963775	.	-	.	ID=gene4157;Dbxref=GeneID:3797274;Name=yjdF;Note=''SDY4230%3B contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yjdF;gene_biotype=pseudogene;locus_tag=SDY_4230;pseudo=true
NC_007606.1	RefSeq	gene	3963868	3965514	.	-	.	ID=gene4158;Dbxref=GeneID:3795671;Name=fumB;Note=SDY4231;gbkey=Gene;gene=fumB;gene_biotype=protein_coding;locus_tag=SDY_4231
NC_007606.1	RefSeq	CDS	3963868	3965514	.	-	0	ID=cds3679;Parent=gene4158;Dbxref=Genbank:YP_405623.1,GeneID:3795671;Name=YP_405623.1;Note=Code: C%3B COG: COG1951;gbkey=CDS;gene=fumB;product=fumarase B;protein_id=YP_405623.1;transl_table=11
NC_007606.1	RefSeq	gene	3965592	3966779	.	-	.	ID=gene4159;Dbxref=GeneID:3795672;Name=dcuB;Note=SDY4232;gbkey=Gene;gene=dcuB;gene_biotype=protein_coding;locus_tag=SDY_4232
NC_007606.1	RefSeq	CDS	3965592	3966779	.	-	0	ID=cds3680;Parent=gene4159;Dbxref=Genbank:YP_405624.1,GeneID:3795672;Name=YP_405624.1;Note=''functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to DcuA%3B DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate%2C malate%2C fumarate and succinate) transporters'';gbkey=CDS;gene=dcuB;product=anaerobic C4-dicarboxylate transporter;protein_id=YP_405624.1;transl_table=11
NC_007606.1	RefSeq	region	3966899	3967666	.	-	.	ID=id637;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3966914	3967291	.	-	.	ID=gene4160;Dbxref=GeneID:3795673;Name=insB;Note=SDY4233;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4233
NC_007606.1	RefSeq	CDS	3966914	3967291	.	-	0	ID=cds3681;Parent=gene4160;Dbxref=Genbank:YP_405625.1,GeneID:3795673;Name=YP_405625.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405625.1;transl_table=11
NC_007606.1	RefSeq	gene	3967336	3967611	.	-	.	ID=gene4161;Dbxref=GeneID:3795674;Name=insA;Note=SDY4234;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4234
NC_007606.1	RefSeq	CDS	3967336	3967611	.	-	0	ID=cds3682;Parent=gene4161;Dbxref=Genbank:YP_405626.1,GeneID:3795674;Name=YP_405626.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405626.1;transl_table=11
NC_007606.1	RefSeq	region	3968216	3968984	.	-	.	ID=id638;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3968233	3968628	.	-	.	ID=gene4162;Dbxref=GeneID:3795675;Name=SDY_4235;Note=SDY4235;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4235
NC_007606.1	RefSeq	CDS	3968233	3968628	.	-	0	ID=cds3683;Parent=gene4162;Dbxref=Genbank:YP_405627.1,GeneID:3795675;Name=YP_405627.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405627.1;transl_table=11
NC_007606.1	RefSeq	gene	3968655	3968927	.	-	.	ID=gene4163;Dbxref=GeneID:18263171;Name=SDY_4784;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4784
NC_007606.1	RefSeq	CDS	3968655	3968927	.	-	0	ID=cds3684;Parent=gene4163;Dbxref=Genbank:YP_009000857.1,GeneID:18263171;Name=YP_009000857.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000857.1;transl_table=11
NC_007606.1	RefSeq	gene	3969054	3969773	.	-	.	ID=gene4164;Dbxref=GeneID:3795677;Name=yjdG;Note=SDY4237;gbkey=Gene;gene=yjdG;gene_biotype=protein_coding;locus_tag=SDY_4237
NC_007606.1	RefSeq	CDS	3969054	3969773	.	-	0	ID=cds3685;Parent=gene4164;Dbxref=Genbank:YP_405629.1,GeneID:3795677;Name=YP_405629.1;Note=response regulator in two-component regulatory system with DcuS%3B phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration;gbkey=CDS;gene=yjdG;product=DNA-binding transcriptional activator DcuR;protein_id=YP_405629.1;transl_table=11
NC_007606.1	RefSeq	gene	3969770	3971401	.	-	.	ID=gene4165;Dbxref=GeneID:3795678;Name=yjdH;Note=SDY4238;gbkey=Gene;gene=yjdH;gene_biotype=protein_coding;locus_tag=SDY_4238
NC_007606.1	RefSeq	CDS	3969770	3971401	.	-	0	ID=cds3686;Parent=gene4165;Dbxref=Genbank:YP_405630.1,GeneID:3795678;Name=YP_405630.1;Note=C4-dicarboxylate-sensing histidine kinase%3B part of two-component regulatory system with DcuR%3B regulates anaerobic fumarate respiration;gbkey=CDS;gene=yjdH;product=sensory histidine kinase DcuS;protein_id=YP_405630.1;transl_table=11
NC_007606.1	RefSeq	gene	3971582	3971812	.	+	.	ID=gene4166;Dbxref=GeneID:3795679;Name=yjdI;Note=SDY4239;gbkey=Gene;gene=yjdI;gene_biotype=protein_coding;locus_tag=SDY_4239
NC_007606.1	RefSeq	CDS	3971582	3971812	.	+	0	ID=cds3687;Parent=gene4166;Dbxref=Genbank:YP_405631.1,GeneID:3795679;Name=YP_405631.1;Note=Code: S%3B COG: COG3592;gbkey=CDS;gene=yjdI;product=hypothetical protein;protein_id=YP_405631.1;transl_table=11
NC_007606.1	RefSeq	gene	3971824	3972096	.	+	.	ID=gene4167;Dbxref=GeneID:3795680;Name=yjdJ;Note=SDY4240;gbkey=Gene;gene=yjdJ;gene_biotype=protein_coding;locus_tag=SDY_4240
NC_007606.1	RefSeq	CDS	3971824	3972096	.	+	0	ID=cds3688;Parent=gene4167;Dbxref=Genbank:YP_405632.1,GeneID:3795680;Name=YP_405632.1;Note=Code: R%3B COG: COG2388;gbkey=CDS;gene=yjdJ;product=hypothetical protein;protein_id=YP_405632.1;transl_table=11
NC_007606.1	RefSeq	region	3972432	3973197	.	-	.	ID=id639;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3972446	3972841	.	-	.	ID=gene4168;Dbxref=GeneID:3795681;Name=SDY_4241;Note=SDY4241;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4241
NC_007606.1	RefSeq	CDS	3972446	3972841	.	-	0	ID=cds3689;Parent=gene4168;Dbxref=Genbank:YP_405633.1,GeneID:3795681;Name=YP_405633.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405633.1;transl_table=11
NC_007606.1	RefSeq	gene	3972868	3973140	.	-	.	ID=gene4169;Dbxref=GeneID:18263172;Name=SDY_4785;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4785
NC_007606.1	RefSeq	CDS	3972868	3973140	.	-	0	ID=cds3690;Parent=gene4169;Dbxref=Genbank:YP_009000858.1,GeneID:18263172;Name=YP_009000858.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000858.1;transl_table=11
NC_007606.1	RefSeq	region	3973411	3974178	.	+	.	ID=id640;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3973786	3974163	.	+	.	ID=gene4170;Dbxref=GeneID:3795682;Name=insB;Note=SDY4242;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4242
NC_007606.1	RefSeq	CDS	3973786	3974163	.	+	0	ID=cds3691;Parent=gene4170;Dbxref=Genbank:YP_405634.1,GeneID:3795682;Name=YP_405634.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405634.1;transl_table=11
NC_007606.1	RefSeq	region	3974302	3975067	.	-	.	ID=id641;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3974316	3974711	.	-	.	ID=gene4171;Dbxref=GeneID:3795683;Name=SDY_4243;Note=SDY4243;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4243
NC_007606.1	RefSeq	CDS	3974316	3974711	.	-	0	ID=cds3692;Parent=gene4171;Dbxref=Genbank:YP_405635.1,GeneID:3795683;Name=YP_405635.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405635.1;transl_table=11
NC_007606.1	RefSeq	gene	3974738	3975010	.	-	.	ID=gene4172;Dbxref=GeneID:18263173;Name=SDY_4786;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4786
NC_007606.1	RefSeq	CDS	3974738	3975010	.	-	0	ID=cds3693;Parent=gene4172;Dbxref=Genbank:YP_009000859.1,GeneID:18263173;Name=YP_009000859.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000859.1;transl_table=11
NC_007606.1	RefSeq	region	3975109	3975876	.	+	.	ID=id642;gbkey=mobile_element
NC_007606.1	RefSeq	gene	3975164	3975439	.	+	.	ID=gene4173;Dbxref=GeneID:3795685;Name=insA;Note=SDY4245;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4245
NC_007606.1	RefSeq	CDS	3975164	3975439	.	+	0	ID=cds3694;Parent=gene4173;Dbxref=Genbank:YP_405637.1,GeneID:3795685;Name=YP_405637.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405637.1;transl_table=11
NC_007606.1	RefSeq	gene	3975484	3975861	.	+	.	ID=gene4174;Dbxref=GeneID:3795686;Name=insB;Note=SDY4246;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4246
NC_007606.1	RefSeq	CDS	3975484	3975861	.	+	0	ID=cds3695;Parent=gene4174;Dbxref=Genbank:YP_405638.1,GeneID:3795686;Name=YP_405638.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405638.1;transl_table=11
NC_007606.1	RefSeq	gene	3976254	3977756	.	+	.	ID=gene4175;Dbxref=GeneID:3795687;Name=ytfR;Note=SDY4247;gbkey=Gene;gene=ytfR;gene_biotype=protein_coding;locus_tag=SDY_4247
NC_007606.1	RefSeq	CDS	3976254	3977756	.	+	0	ID=cds3696;Parent=gene4175;Dbxref=Genbank:YP_405639.1,GeneID:3795687;Name=YP_405639.1;Note=Code: G%3B COG: COG1129;gbkey=CDS;gene=ytfR;product=ATPase;protein_id=YP_405639.1;transl_table=11
NC_007606.1	RefSeq	gene	3977767	3978696	.	+	.	ID=gene4176;Dbxref=GeneID:3795688;Name=ytfT;Note=SDY4248;gbkey=Gene;gene=ytfT;gene_biotype=protein_coding;locus_tag=SDY_4248
NC_007606.1	RefSeq	CDS	3977767	3978696	.	+	0	ID=cds3697;Parent=gene4176;Dbxref=Genbank:YP_405640.1,GeneID:3795688;Name=YP_405640.1;Note=Code: G%3B COG: COG1172;gbkey=CDS;gene=ytfT;product=transport system permease;protein_id=YP_405640.1;transl_table=11
NC_007606.1	RefSeq	gene	3978803	3979774	.	+	.	ID=gene4177;Dbxref=GeneID:3795689;Name=yjfF;Note=SDY4249;gbkey=Gene;gene=yjfF;gene_biotype=protein_coding;locus_tag=SDY_4249
NC_007606.1	RefSeq	CDS	3978803	3979774	.	+	0	ID=cds3698;Parent=gene4177;Dbxref=Genbank:YP_405641.1,GeneID:3795689;Name=YP_405641.1;Note=membrane component of a  sugar ABC transporter system;gbkey=CDS;gene=yjfF;product=ABC transporter permease;protein_id=YP_405641.1;transl_table=11
NC_007606.1	RefSeq	gene	3979807	3980805	.	-	.	ID=gene4178;Dbxref=GeneID:3795690;Name=fbp;Note=SDY4250;gbkey=Gene;gene=fbp;gene_biotype=protein_coding;locus_tag=SDY_4250
NC_007606.1	RefSeq	CDS	3979807	3980805	.	-	0	ID=cds3699;Parent=gene4178;Dbxref=Genbank:YP_405642.1,GeneID:3795690;Name=YP_405642.1;Note=''catalyzes the formation of D-fructose 6-phosphate from fructose-1%2C6-bisphosphate'';gbkey=CDS;gene=fbp;product=fructose-1%2C6-bisphosphatase;protein_id=YP_405642.1;transl_table=11
NC_007606.1	RefSeq	gene	3980981	3982354	.	+	.	ID=gene4179;Dbxref=GeneID:3799112;Name=yjfG;Note=SDY4251;gbkey=Gene;gene=yjfG;gene_biotype=protein_coding;locus_tag=SDY_4251
NC_007606.1	RefSeq	CDS	3980981	3982354	.	+	0	ID=cds3700;Parent=gene4179;Dbxref=Genbank:YP_405643.1,GeneID:3799112;Name=YP_405643.1;Note=Code: M%3B COG: COG0773;gbkey=CDS;gene=yjfG;product=ligase;protein_id=YP_405643.1;transl_table=11
NC_007606.1	RefSeq	gene	3982437	3982982	.	-	.	ID=gene4180;Dbxref=GeneID:3799113;Name=yjgA;Note=SDY4252;gbkey=Gene;gene=yjgA;gene_biotype=protein_coding;locus_tag=SDY_4252
NC_007606.1	RefSeq	CDS	3982437	3982982	.	-	0	ID=cds3701;Parent=gene4180;Dbxref=Genbank:YP_405644.1,GeneID:3799113;Name=YP_405644.1;Note=Code: S%3B COG: COG3028;gbkey=CDS;gene=yjgA;product=hypothetical protein;protein_id=YP_405644.1;transl_table=11
NC_007606.1	RefSeq	gene	3983076	3984428	.	+	.	ID=gene4181;Dbxref=GeneID:3799114;Name=pmbA;Note=SDY4253;gbkey=Gene;gene=pmbA;gene_biotype=protein_coding;gene_synonym=tldE;locus_tag=SDY_4253
NC_007606.1	RefSeq	CDS	3983076	3984428	.	+	0	ID=cds3702;Parent=gene4181;Dbxref=Genbank:YP_405645.1,GeneID:3799114;Name=YP_405645.1;Note=protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD;gbkey=CDS;gene=pmbA;product=peptidase PmbA;protein_id=YP_405645.1;transl_table=11
NC_007606.1	RefSeq	gene	3984612	3984998	.	+	.	ID=gene4182;Dbxref=GeneID:18263174;Name=SDY_4255a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4255a
NC_007606.1	RefSeq	CDS	3984612	3984998	.	+	0	ID=cds3703;Parent=gene4182;Dbxref=Genbank:YP_009000860.1,GeneID:18263174;Name=YP_009000860.1;gbkey=CDS;product=cytochrome b562;protein_id=YP_009000860.1;transl_table=11
NC_007606.1	RefSeq	gene	3985189	3985428	.	+	.	ID=gene4183;Dbxref=GeneID:3799116;Name=relB;Note=SDY4255;gbkey=Gene;gene=relB;gene_biotype=protein_coding;locus_tag=SDY_4255
NC_007606.1	RefSeq	CDS	3985189	3985428	.	+	0	ID=cds3704;Parent=gene4183;Dbxref=Genbank:YP_405647.1,GeneID:3799116;Name=YP_405647.1;Note=Qin prophage%3B bifunctional antitoxin of the RelE-RelB toxin-antitoxin system/transcriptional repressor;gbkey=CDS;gene=relB;product=bifunctional antitoxin/transcriptional repressor RelB;protein_id=YP_405647.1;transl_table=11
NC_007606.1	RefSeq	gene	3985429	3985893	.	-	.	ID=gene4184;Dbxref=GeneID:3799117;Name=nrdG;Note=SDY4256;gbkey=Gene;gene=nrdG;gene_biotype=protein_coding;locus_tag=SDY_4256
NC_007606.1	RefSeq	CDS	3985429	3985893	.	-	0	ID=cds3705;Parent=gene4184;Dbxref=Genbank:YP_405648.1,GeneID:3799117;Name=YP_405648.1;Note=activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions;gbkey=CDS;gene=nrdG;product=anaerobic ribonucleotide reductase-activating protein;protein_id=YP_405648.1;transl_table=11
NC_007606.1	RefSeq	gene	3986083	3988221	.	-	.	ID=gene4185;Dbxref=GeneID:3799118;Name=nrdD;Note=SDY4257;gbkey=Gene;gene=nrdD;gene_biotype=protein_coding;locus_tag=SDY_4257
NC_007606.1	RefSeq	CDS	3986083	3988221	.	-	0	ID=cds3706;Parent=gene4185;Dbxref=Genbank:YP_405649.1,GeneID:3799118;Name=YP_405649.1;Note=Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates;gbkey=CDS;gene=nrdD;product=anaerobic ribonucleoside triphosphate reductase;protein_id=YP_405649.1;transl_table=11
NC_007606.1	RefSeq	gene	3988615	3990270	.	-	.	ID=gene4186;Dbxref=GeneID:3799119;Name=treC;Note=SDY4258;gbkey=Gene;gene=treC;gene_biotype=protein_coding;locus_tag=SDY_4258
NC_007606.1	RefSeq	CDS	3988615	3990270	.	-	0	ID=cds3707;Parent=gene4186;Dbxref=Genbank:YP_405650.1,GeneID:3799119;Name=YP_405650.1;Note=Code: G%3B COG: COG0366;gbkey=CDS;gene=treC;product=trehalose-6-phosphate hydrolase;protein_id=YP_405650.1;transl_table=11
NC_007606.1	RefSeq	gene	3990320	3991741	.	-	.	ID=gene4187;Dbxref=GeneID:3799120;Name=treB;Note=SDY4259;gbkey=Gene;gene=treB;gene_biotype=protein_coding;locus_tag=SDY_4259
NC_007606.1	RefSeq	CDS	3990320	3991741	.	-	0	ID=cds3708;Parent=gene4187;Dbxref=Genbank:YP_405651.1,GeneID:3799120;Name=YP_405651.1;Note=phosphoenolpyruvate-dependent sugar phosphotransferase system%3B catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane%3B IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar%3B IIC forms the translocation channel;gbkey=CDS;gene=treB;product=PTS system trehalose(maltose)-specific transporter subunit IIBC;protein_id=YP_405651.1;transl_table=11
NC_007606.1	RefSeq	gene	3991860	3992807	.	-	.	ID=gene4188;Dbxref=GeneID:3799121;Name=treR;Note=SDY4260;gbkey=Gene;gene=treR;gene_biotype=protein_coding;locus_tag=SDY_4260
NC_007606.1	RefSeq	CDS	3991860	3992807	.	-	0	ID=cds3709;Parent=gene4188;Dbxref=Genbank:YP_405652.1,GeneID:3799121;Name=YP_405652.1;Note=regulates genes involved in trehalose metabolism%3B binds the intermediate trehalose-6-phosphate%3B binds a dimer%3B regulates treBC operon;gbkey=CDS;gene=treR;product=trehalose repressor;protein_id=YP_405652.1;transl_table=11
NC_007606.1	RefSeq	gene	3993186	3995882	.	+	.	ID=gene4189;Dbxref=GeneID:3799122;Name=mgtA;Note=SDY4261;gbkey=Gene;gene=mgtA;gene_biotype=protein_coding;locus_tag=SDY_4261
NC_007606.1	RefSeq	CDS	3993186	3995882	.	+	0	ID=cds3710;Parent=gene4189;Dbxref=Genbank:YP_405653.1,GeneID:3799122;Name=YP_405653.1;Note=P-type ATPase involved in magnesium influx;gbkey=CDS;gene=mgtA;product=magnesium-transporting ATPase MgtA;protein_id=YP_405653.1;transl_table=11
NC_007606.1	RefSeq	gene	3996088	3996513	.	-	.	ID=gene4190;Dbxref=GeneID:3799123;Name=yjgF;Note=SDY4262;gbkey=Gene;gene=yjgF;gene_biotype=protein_coding;locus_tag=SDY_4262
NC_007606.1	RefSeq	CDS	3996088	3996513	.	-	0	ID=cds3711;Parent=gene4190;Dbxref=Genbank:YP_405654.1,GeneID:3799123;Name=YP_405654.1;Note=Code: J%3B COG: COG0251;gbkey=CDS;gene=yjgF;product=hypothetical protein;protein_id=YP_405654.1;transl_table=11
NC_007606.1	RefSeq	gene	3996547	3997008	.	-	.	ID=gene4191;Dbxref=GeneID:3799124;Name=pyrI;Note=SDY4263;gbkey=Gene;gene=pyrI;gene_biotype=protein_coding;locus_tag=SDY_4263
NC_007606.1	RefSeq	CDS	3996547	3997008	.	-	0	ID=cds3712;Parent=gene4191;Dbxref=Genbank:YP_405655.1,GeneID:3799124;Name=YP_405655.1;Note=involved in the allosteric regulation of aspartate carbamoyltransferase;gbkey=CDS;gene=pyrI;product=aspartate carbamoyltransferase;protein_id=YP_405655.1;transl_table=11
NC_007606.1	RefSeq	gene	3997021	3997956	.	-	.	ID=gene4192;Dbxref=GeneID:3799125;Name=pyrB;Note=SDY4264;gbkey=Gene;gene=pyrB;gene_biotype=protein_coding;locus_tag=SDY_4264
NC_007606.1	RefSeq	CDS	3997021	3997956	.	-	0	ID=cds3713;Parent=gene4192;Dbxref=Genbank:YP_405656.1,GeneID:3799125;Name=YP_405656.1;Note=catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis;gbkey=CDS;gene=pyrB;product=aspartate carbamoyltransferase;protein_id=YP_405656.1;transl_table=11
NC_007606.1	RefSeq	gene	3997960	3998094	.	-	.	ID=gene4193;Dbxref=GeneID:3799126;Name=pyrL;Note=SDY4265;gbkey=Gene;gene=pyrL;gene_biotype=protein_coding;locus_tag=SDY_4265
NC_007606.1	RefSeq	CDS	3997960	3998094	.	-	0	ID=cds3714;Parent=gene4193;Dbxref=Genbank:YP_405657.1,GeneID:3799126;Name=YP_405657.1;gbkey=CDS;gene=pyrL;product=pyrBI operon leader peptide;protein_id=YP_405657.1;transl_table=11
NC_007606.1	RefSeq	gene	3998374	3998769	.	-	.	ID=gene4194;Dbxref=GeneID:3799127;Name=yjgH;Note=SDY4266;gbkey=Gene;gene=yjgH;gene_biotype=protein_coding;locus_tag=SDY_4266
NC_007606.1	RefSeq	CDS	3998374	3998769	.	-	0	ID=cds3715;Parent=gene4194;Dbxref=Genbank:YP_405658.1,GeneID:3799127;Name=YP_405658.1;Note=Code: J%3B COG: COG0251;gbkey=CDS;gene=yjgH;product=hypothetical protein;protein_id=YP_405658.1;transl_table=11
NC_007606.1	RefSeq	gene	3998900	3999613	.	-	.	ID=gene4195;Dbxref=GeneID:3799128;Name=yjgI;Note=SDY4267;gbkey=Gene;gene=yjgI;gene_biotype=protein_coding;locus_tag=SDY_4267
NC_007606.1	RefSeq	CDS	3998900	3999613	.	-	0	ID=cds3716;Parent=gene4195;Dbxref=Genbank:YP_405659.1,GeneID:3799128;Name=YP_405659.1;Note=Code: IQR%3B COG: COG1028;gbkey=CDS;gene=yjgI;product=oxidoreductase;protein_id=YP_405659.1;transl_table=11
NC_007606.1	RefSeq	gene	3999684	4000277	.	+	.	ID=gene4196;Dbxref=GeneID:3799130;Name=yjgJ;Note=SDY4269;gbkey=Gene;gene=yjgJ;gene_biotype=protein_coding;locus_tag=SDY_4269
NC_007606.1	RefSeq	CDS	3999684	4000277	.	+	0	ID=cds3717;Parent=gene4196;Dbxref=Genbank:YP_405661.2,GeneID:3799130;Name=YP_405661.2;gbkey=CDS;gene=yjgJ;product=hypothetical protein;protein_id=YP_405661.2;transl_table=11
NC_007606.1	RefSeq	gene	3999787	3999951	.	+	.	ID=gene4197;Dbxref=GeneID:3799129;Name=SDY_4268;Note=SDY4268;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4268
NC_007606.1	RefSeq	CDS	3999787	3999951	.	+	0	ID=cds3718;Parent=gene4197;Dbxref=Genbank:YP_405660.1,GeneID:3799129;Name=YP_405660.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405660.1;transl_table=11
NC_007606.1	RefSeq	gene	4000413	4000874	.	+	.	ID=gene4198;Dbxref=GeneID:3796938;Name=yjgK;Note=SDY4270;gbkey=Gene;gene=yjgK;gene_biotype=protein_coding;locus_tag=SDY_4270
NC_007606.1	RefSeq	CDS	4000413	4000874	.	+	0	ID=cds3719;Parent=gene4198;Dbxref=Genbank:YP_405662.1,GeneID:3796938;Name=YP_405662.1;Note=Code: G%3B COG: COG2731;gbkey=CDS;gene=yjgK;product=hypothetical protein;protein_id=YP_405662.1;transl_table=11
NC_007606.1	RefSeq	region	4000979	4001744	.	+	.	ID=id643;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4001036	4001308	.	+	.	ID=gene4199;Dbxref=GeneID:18263175;Name=SDY_4787;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4787
NC_007606.1	RefSeq	CDS	4001036	4001308	.	+	0	ID=cds3720;Parent=gene4199;Dbxref=Genbank:YP_009000861.1,GeneID:18263175;Name=YP_009000861.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000861.1;transl_table=11
NC_007606.1	RefSeq	region	4001883	4002650	.	+	.	ID=id644;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4001938	4002213	.	+	.	ID=gene4200;Dbxref=GeneID:3796940;Name=insA;Note=SDY4272;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4272
NC_007606.1	RefSeq	CDS	4001938	4002213	.	+	0	ID=cds3721;Parent=gene4200;Dbxref=Genbank:YP_405664.1,GeneID:3796940;Name=YP_405664.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405664.1;transl_table=11
NC_007606.1	RefSeq	gene	4002258	4002635	.	+	.	ID=gene4201;Dbxref=GeneID:3796941;Name=insB;Note=SDY4273;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4273
NC_007606.1	RefSeq	CDS	4002258	4002635	.	+	0	ID=cds3722;Parent=gene4201;Dbxref=Genbank:YP_405665.1,GeneID:3796941;Name=YP_405665.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405665.1;transl_table=11
NC_007606.1	RefSeq	region	4002651	4003974	.	+	.	ID=id645;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4002735	4003100	.	+	.	ID=gene4202;Dbxref=GeneID:3796942;Name=SDY_4274;Note=SDY4274;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4274
NC_007606.1	RefSeq	CDS	4002735	4003100	.	+	0	ID=cds3723;Parent=gene4202;Dbxref=Genbank:YP_405666.1,GeneID:3796942;Name=YP_405666.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_405666.1;transl_table=11
NC_007606.1	RefSeq	gene	4003058	4003963	.	+	.	ID=gene4203;Dbxref=GeneID:3796943;Name=SDY_4275;Note=SDY4275;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4275
NC_007606.1	RefSeq	CDS	4003058	4003963	.	+	0	ID=cds3724;Parent=gene4203;Dbxref=Genbank:YP_405667.2,GeneID:3796943;Name=YP_405667.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_405667.2;transl_table=11
NC_007606.1	RefSeq	gene	4004057	4005061	.	-	.	ID=gene4204;Dbxref=GeneID:3796944;Name=argI;Note=SDY4276;gbkey=Gene;gene=argI;gene_biotype=protein_coding;locus_tag=SDY_4276
NC_007606.1	RefSeq	CDS	4004057	4005061	.	-	0	ID=cds3725;Parent=gene4204;Dbxref=Genbank:YP_405668.1,GeneID:3796944;Name=YP_405668.1;Note=''catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation%3B E. coli K12 has two genes%2C argF and argI%2C capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell%2C the two gene products form a family of four hybrid trimeric isoenzymes designated%2C FFF%2C FFI%2C FII%2C and III.'';gbkey=CDS;gene=argI;product=ornithine carbamoyltransferase subunit I;protein_id=YP_405668.1;transl_table=11
NC_007606.1	RefSeq	gene	4005223	4005639	.	+	.	ID=gene4205;Dbxref=GeneID:3796945;Name=yjgD;Note=SDY4277;gbkey=Gene;gene=yjgD;gene_biotype=protein_coding;locus_tag=SDY_4277
NC_007606.1	RefSeq	CDS	4005223	4005639	.	+	0	ID=cds3726;Parent=gene4205;Dbxref=Genbank:YP_405669.1,GeneID:3796945;Name=YP_405669.1;Note=Code: S%3B COG: COG3076;gbkey=CDS;gene=yjgD;product=hypothetical protein;protein_id=YP_405669.1;transl_table=11
NC_007606.1	RefSeq	gene	4005684	4006187	.	-	.	ID=gene4206;Dbxref=GeneID:3796946;Name=SDY_4278;Note=SDY4278;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4278
NC_007606.1	RefSeq	CDS	4005684	4006187	.	-	0	ID=cds3727;Parent=gene4206;Dbxref=Genbank:YP_405670.2,GeneID:3796946;Name=YP_405670.2;Note=Code: KR%3B COG: COG0454;gbkey=CDS;product=hypothetical protein;protein_id=YP_405670.2;transl_table=11
NC_007606.1	RefSeq	region	4006213	4006976	.	-	.	ID=id646;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4006225	4006620	.	-	.	ID=gene4207;Dbxref=GeneID:3796947;Name=SDY_4279;Note=SDY4279;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4279
NC_007606.1	RefSeq	CDS	4006225	4006620	.	-	0	ID=cds3728;Parent=gene4207;Dbxref=Genbank:YP_405671.1,GeneID:3796947;Name=YP_405671.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405671.1;transl_table=11
NC_007606.1	RefSeq	gene	4006647	4006919	.	-	.	ID=gene4208;Dbxref=GeneID:18263176;Name=SDY_4788;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4788
NC_007606.1	RefSeq	CDS	4006647	4006919	.	-	0	ID=cds3729;Parent=gene4208;Dbxref=Genbank:YP_009000862.1,GeneID:18263176;Name=YP_009000862.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000862.1;transl_table=11
NC_007606.1	RefSeq	gene	4007154	4007756	.	+	.	ID=gene4209;Dbxref=GeneID:3796948;Name=yjgN;Note=''SDY4280%3B contains iso-IS1 insertion%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yjgN;gene_biotype=pseudogene;locus_tag=SDY_4280;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	4007735	4008501	.	+	.	ID=id647;gbkey=mobile_element;gene=yjgN
NC_007606.1	RefSeq	gene	4007792	4008064	.	+	.	ID=gene4210;Dbxref=GeneID:18263177;Name=SDY_4789;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4789
NC_007606.1	RefSeq	CDS	4007792	4008064	.	+	0	ID=cds3730;Parent=gene4210;Dbxref=Genbank:YP_009000863.1,GeneID:18263177;Name=YP_009000863.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000863.1;transl_table=11
NC_007606.1	RefSeq	gene	4008091	4008486	.	+	.	ID=gene4211;Dbxref=GeneID:3796949;Name=SDY_4281;Note=SDY4281;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4281
NC_007606.1	RefSeq	CDS	4008091	4008486	.	+	0	ID=cds3731;Parent=gene4211;Dbxref=Genbank:YP_405672.1,GeneID:3796949;Name=YP_405672.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405672.1;transl_table=11
NC_007606.1	RefSeq	gene	4009180	4012035	.	-	.	ID=gene4212;Dbxref=GeneID:3796950;Name=valS;Note=SDY4282;gbkey=Gene;gene=valS;gene_biotype=protein_coding;locus_tag=SDY_4282
NC_007606.1	RefSeq	CDS	4009180	4012035	.	-	0	ID=cds3732;Parent=gene4212;Dbxref=Genbank:YP_405673.1,GeneID:3796950;Name=YP_405673.1;Note=valine--tRNA ligase%3B ValRS%3B converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val)%3B class-I aminoacyl-tRNA synthetase type 1 subfamily%3B has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain;gbkey=CDS;gene=valS;product=valyl-tRNA synthetase;protein_id=YP_405673.1;transl_table=11
NC_007606.1	RefSeq	gene	4012035	4012478	.	-	.	ID=gene4213;Dbxref=GeneID:3796951;Name=holC;Note=SDY4283;gbkey=Gene;gene=holC;gene_biotype=protein_coding;locus_tag=SDY_4283
NC_007606.1	RefSeq	CDS	4012035	4012478	.	-	0	ID=cds3733;Parent=gene4213;Dbxref=Genbank:YP_405674.1,GeneID:3796951;Name=YP_405674.1;Note=binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;gene=holC;product=DNA polymerase III subunit chi;protein_id=YP_405674.1;transl_table=11
NC_007606.1	RefSeq	gene	4012736	4014247	.	-	.	ID=gene4214;Dbxref=GeneID:3796952;Name=pepA;Note=SDY4284;gbkey=Gene;gene=pepA;gene_biotype=protein_coding;locus_tag=SDY_4284
NC_007606.1	RefSeq	CDS	4012736	4014247	.	-	0	ID=cds3734;Parent=gene4214;Dbxref=Genbank:YP_405675.1,GeneID:3796952;Name=YP_405675.1;Note=catalyzes the removal of N-terminal amino acids preferably leucine from various peptides;gbkey=CDS;gene=pepA;product=leucyl aminopeptidase;protein_id=YP_405675.1;transl_table=11
NC_007606.1	RefSeq	gene	4014514	4015614	.	+	.	ID=gene4215;Dbxref=GeneID:3796953;Name=yjgP;Note=SDY4285;gbkey=Gene;gene=yjgP;gene_biotype=protein_coding;locus_tag=SDY_4285
NC_007606.1	RefSeq	CDS	4014514	4015614	.	+	0	ID=cds3735;Parent=gene4215;Dbxref=Genbank:YP_405676.1,GeneID:3796953;Name=YP_405676.1;Note=Code: R%3B COG: COG0795;gbkey=CDS;gene=yjgP;product=hypothetical protein;protein_id=YP_405676.1;transl_table=11
NC_007606.1	RefSeq	gene	4015611	4016696	.	+	.	ID=gene4216;Dbxref=GeneID:3796954;Name=yjgQ;Note=SDY4286;gbkey=Gene;gene=yjgQ;gene_biotype=protein_coding;locus_tag=SDY_4286
NC_007606.1	RefSeq	CDS	4015611	4016696	.	+	0	ID=cds3736;Parent=gene4216;Dbxref=Genbank:YP_405677.1,GeneID:3796954;Name=YP_405677.1;Note=Code: R%3B COG: COG0795;gbkey=CDS;gene=yjgQ;product=hypothetical protein;protein_id=YP_405677.1;transl_table=11
NC_007606.1	RefSeq	gene	4016857	4018359	.	-	.	ID=gene4217;Dbxref=GeneID:3796955;Name=yjgR;Note=SDY4287;gbkey=Gene;gene=yjgR;gene_biotype=protein_coding;locus_tag=SDY_4287
NC_007606.1	RefSeq	CDS	4016857	4018359	.	-	0	ID=cds3737;Parent=gene4217;Dbxref=Genbank:YP_405678.1,GeneID:3796955;Name=YP_405678.1;Note=Code: R%3B COG: COG0433;gbkey=CDS;gene=yjgR;product=hypothetical protein;protein_id=YP_405678.1;transl_table=11
NC_007606.1	RefSeq	gene	4018489	4019550	.	-	.	ID=gene4218;Dbxref=GeneID:3796956;Name=yjgB;Note=SDY4288;gbkey=Gene;gene=yjgB;gene_biotype=protein_coding;locus_tag=SDY_4288
NC_007606.1	RefSeq	CDS	4018489	4019550	.	-	0	ID=cds3738;Parent=gene4218;Dbxref=Genbank:YP_405679.1,GeneID:3796956;Name=YP_405679.1;Note=Code: R%3B COG: COG1064;gbkey=CDS;gene=yjgB;product=oxidoreductase;protein_id=YP_405679.1;transl_table=11
NC_007606.1	RefSeq	gene	4019704	4019788	.	+	.	ID=gene4219;Dbxref=GeneID:3796957;Name=SDY_4289;Note=SDY4289;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_4289
NC_007606.1	RefSeq	tRNA	4019704	4019788	.	+	.	ID=rna96;Parent=gene4219;Dbxref=GeneID:3796957;codons=3;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	exon	4019704	4019788	.	+	.	ID=id648;Parent=rna96;Dbxref=GeneID:3796957;codons=3;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	gene	4019987	4020163	.	+	.	ID=gene4220;Dbxref=GeneID:3799247;Name=SDY_4290;Note=SDY4290%3B truncated%3B original product:  P4-type integrase;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4290;pseudo=true
NC_007606.1	RefSeq	region	4020163	4021412	.	-	.	ID=id649;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4020171	4021011	.	-	.	ID=gene4221;Dbxref=GeneID:3799248;Name=SDY_4291;Note=SDY4291;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4291;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	4021038	4021340	.	-	.	ID=gene4222;Dbxref=GeneID:3799249;Name=SDY_4292;Note=SDY4292;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4292
NC_007606.1	RefSeq	CDS	4021038	4021340	.	-	0	ID=cds3739;Parent=gene4222;Dbxref=Genbank:YP_405681.1,GeneID:3799249;Name=YP_405681.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_405681.1;transl_table=11
NC_007606.1	RefSeq	gene	4022300	4023067	.	-	.	ID=gene4223;Dbxref=GeneID:3799250;Name=fecE;Note=SDY4293;gbkey=Gene;gene=fecE;gene_biotype=protein_coding;locus_tag=SDY_4293
NC_007606.1	RefSeq	CDS	4022300	4023067	.	-	0	ID=cds3740;Parent=gene4223;Dbxref=Genbank:YP_405682.1,GeneID:3799250;Name=YP_405682.1;Note=Part of the FecBCDE citrate-dependent iron (III) transport system;gbkey=CDS;gene=fecE;product=iron-dicitrate ABC transporter ATP-binding protein;protein_id=YP_405682.1;transl_table=11
NC_007606.1	RefSeq	gene	4023068	4024024	.	-	.	ID=gene4224;Dbxref=GeneID:3799251;Name=fecD;Note=SDY4294;gbkey=Gene;gene=fecD;gene_biotype=protein_coding;locus_tag=SDY_4294
NC_007606.1	RefSeq	CDS	4023068	4024024	.	-	0	ID=cds3741;Parent=gene4224;Dbxref=Genbank:YP_405683.1,GeneID:3799251;Name=YP_405683.1;Note=''Ferric citrate binds FecA and is transported across the outer membrane while transmits a signal across the cytoplasmic membrane protein FecR. FecR transmits a signal across the membrane and activates the cytoplasmic FecI that directs the RNA polymerase to express the fecABCDE operon (which encodes the ferric citrate outer membrane receptor and the ferric citrate ABC transporter)%2C as well as fecIR. FecD is one of two (along with FecC) integral membrane protein components of the iron dicitrate ABC transporter.'';gbkey=CDS;gene=fecD;product=iron-dicitrate transporter subunit FecD;protein_id=YP_405683.1;transl_table=11
NC_007606.1	RefSeq	gene	4024021	4025016	.	-	.	ID=gene4225;Dbxref=GeneID:3799252;Name=fecC;Note=SDY4295;gbkey=Gene;gene=fecC;gene_biotype=protein_coding;locus_tag=SDY_4295
NC_007606.1	RefSeq	CDS	4024021	4025016	.	-	0	ID=cds3742;Parent=gene4225;Dbxref=Genbank:YP_405684.1,GeneID:3799252;Name=YP_405684.1;Note=part of the FecBCDE citrate-dependent iron (III) transport system;gbkey=CDS;gene=fecC;product=iron-dicitrate ABC transporter permease;protein_id=YP_405684.1;transl_table=11
NC_007606.1	RefSeq	gene	4025013	4025920	.	-	.	ID=gene4226;Dbxref=GeneID:3799253;Name=fecB;Note=''SDY4296%3B frameshift%3B original product: citrate-dependent iron transport%2C periplasmic protein'';gbkey=Gene;gene=fecB;gene_biotype=pseudogene;locus_tag=SDY_4296;pseudo=true
NC_007606.1	RefSeq	gene	4025959	4028283	.	-	.	ID=gene4227;Dbxref=GeneID:3799254;Name=fecA;Note=SDY4297;gbkey=Gene;gene=fecA;gene_biotype=protein_coding;locus_tag=SDY_4297
NC_007606.1	RefSeq	CDS	4025959	4028283	.	-	0	ID=cds3743;Parent=gene4227;Dbxref=Genbank:YP_405685.1,GeneID:3799254;Name=YP_405685.1;Note=Code: P%3B COG: COG4772;gbkey=CDS;gene=fecA;product=citrate-dependent iron transport%2C outer membrane receptor;protein_id=YP_405685.1;transl_table=11
NC_007606.1	RefSeq	gene	4028370	4029323	.	-	.	ID=gene4228;Dbxref=GeneID:3799255;Name=fecR;Note=''SDY4298%3B contains in-frame stop codon%3B original product: regulator for fec operon%2C periplasmic'';gbkey=Gene;gene=fecR;gene_biotype=pseudogene;locus_tag=SDY_4298;pseudo=true
NC_007606.1	RefSeq	gene	4029320	4029841	.	-	.	ID=gene4229;Dbxref=GeneID:3799256;Name=fecI;Note=SDY4299;gbkey=Gene;gene=fecI;gene_biotype=protein_coding;locus_tag=SDY_4299
NC_007606.1	RefSeq	CDS	4029320	4029841	.	-	0	ID=cds3744;Parent=gene4229;Dbxref=Genbank:YP_405686.1,GeneID:3799256;Name=YP_405686.1;Note=Member of the extracytoplasmic function sigma factors which are active under specific conditions%3B binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription%3B this sigma factor regulates the genes for iron dicitrate transport;gbkey=CDS;gene=fecI;product=RNA polymerase sigma factor FecI;protein_id=YP_405686.1;transl_table=11
NC_007606.1	RefSeq	region	4029938	4030704	.	+	.	ID=id650;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4029995	4030267	.	+	.	ID=gene4230;Dbxref=GeneID:18263178;Name=SDY_4790;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4790
NC_007606.1	RefSeq	CDS	4029995	4030267	.	+	0	ID=cds3745;Parent=gene4230;Dbxref=Genbank:YP_009000864.1,GeneID:18263178;Name=YP_009000864.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000864.1;transl_table=11
NC_007606.1	RefSeq	gene	4030294	4030689	.	+	.	ID=gene4231;Dbxref=GeneID:3799258;Name=SDY_4301;Note=SDY4301;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4301
NC_007606.1	RefSeq	CDS	4030294	4030689	.	+	0	ID=cds3746;Parent=gene4231;Dbxref=Genbank:YP_405688.1,GeneID:3799258;Name=YP_405688.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405688.1;transl_table=11
NC_007606.1	RefSeq	region	4030852	4031619	.	+	.	ID=id651;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4030907	4031182	.	+	.	ID=gene4232;Dbxref=GeneID:3799259;Name=insA;Note=SDY4302;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4302
NC_007606.1	RefSeq	CDS	4030907	4031182	.	+	0	ID=cds3747;Parent=gene4232;Dbxref=Genbank:YP_405689.1,GeneID:3799259;Name=YP_405689.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 7 protein InsA;protein_id=YP_405689.1;transl_table=11
NC_007606.1	RefSeq	region	4031690	4031924	.	+	.	ID=id652;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	4032918	4033088	.	-	.	ID=id653;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4033358	4034731	.	+	.	ID=gene4233;Dbxref=GeneID:3799261;Name=SDY_4304;Note=SDY4304;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4304
NC_007606.1	RefSeq	CDS	4033358	4034731	.	+	0	ID=cds3748;Parent=gene4233;Dbxref=Genbank:YP_405691.1,GeneID:3799261;Name=YP_405691.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405691.1;transl_table=11
NC_007606.1	RefSeq	region	4034933	4035155	.	-	.	ID=id654;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	4035206	4035784	.	-	.	ID=id655;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4036046	4036480	.	-	.	ID=gene4234;Dbxref=GeneID:3799263;Name=SDY_4306;Note=SDY4306;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4306
NC_007606.1	RefSeq	CDS	4036046	4036480	.	-	0	ID=cds3749;Parent=gene4234;Dbxref=Genbank:YP_405693.1,GeneID:3799263;Name=YP_405693.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405693.1;transl_table=11
NC_007606.1	RefSeq	region	4036676	4036866	.	-	.	ID=id656;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	4036953	4038283	.	-	.	ID=id657;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4036964	4037869	.	-	.	ID=gene4235;Dbxref=GeneID:3799264;Name=SDY_4307;Note=SDY4307;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4307
NC_007606.1	RefSeq	CDS	4036964	4037869	.	-	0	ID=cds3750;Parent=gene4235;Dbxref=Genbank:YP_405694.2,GeneID:3799264;Name=YP_405694.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_405694.2;transl_table=11
NC_007606.1	RefSeq	gene	4037827	4038192	.	-	.	ID=gene4236;Dbxref=GeneID:3796481;Name=SDY_4308;Note=SDY4308;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4308
NC_007606.1	RefSeq	CDS	4037827	4038192	.	-	0	ID=cds3751;Parent=gene4236;Dbxref=Genbank:YP_405695.1,GeneID:3796481;Name=YP_405695.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_405695.1;transl_table=11
NC_007606.1	RefSeq	gene	4038476	4038748	.	+	.	ID=gene4237;Dbxref=GeneID:3796482;Name=yjbD;Note=SDY4309;gbkey=Gene;gene=yjbD;gene_biotype=protein_coding;locus_tag=SDY_4309
NC_007606.1	RefSeq	CDS	4038476	4038748	.	+	0	ID=cds3752;Parent=gene4237;Dbxref=Genbank:YP_405696.1,GeneID:3796482;Name=YP_405696.1;gbkey=CDS;gene=yjbD;product=hypothetical protein;protein_id=YP_405696.1;transl_table=11
NC_007606.1	RefSeq	gene	4038749	4039621	.	-	.	ID=gene4238;Dbxref=GeneID:3796483;Name=yjbC;Note=SDY4310;gbkey=Gene;gene=yjbC;gene_biotype=protein_coding;locus_tag=SDY_4310
NC_007606.1	RefSeq	CDS	4038749	4039621	.	-	0	ID=cds3753;Parent=gene4238;Dbxref=Genbank:YP_405697.1,GeneID:3796483;Name=YP_405697.1;Note=catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA;gbkey=CDS;gene=yjbC;product=23S rRNA pseudouridine synthase F;protein_id=YP_405697.1;transl_table=11
NC_007606.1	RefSeq	gene	4039969	4040916	.	+	.	ID=gene4239;Dbxref=GeneID:3796484;Name=SDY_4311;Note=SDY4311;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4311
NC_007606.1	RefSeq	CDS	4039969	4040916	.	+	0	ID=cds3754;Parent=gene4239;Dbxref=Genbank:YP_405698.1,GeneID:3796484;Name=YP_405698.1;Note=Code: K%3B COG: COG2390;gbkey=CDS;product=sorbose uptake and utilization genes transcriptional regulator;protein_id=YP_405698.1;transl_table=11
NC_007606.1	RefSeq	region	4041062	4041826	.	-	.	ID=id658;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4041835	4042056	.	+	.	ID=gene4240;Dbxref=GeneID:3796487;Name=SDY_4314;Note=SDY4314%3B truncated%3B original product:  sorbose PTS component;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4314;pseudo=true
NC_007606.1	RefSeq	gene	4042122	4042919	.	+	.	ID=gene4241;Dbxref=GeneID:3796488;Name=SDY_4315;Note=SDY4315;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4315
NC_007606.1	RefSeq	CDS	4042122	4042919	.	+	0	ID=cds3755;Parent=gene4241;Dbxref=Genbank:YP_405701.1,GeneID:3796488;Name=YP_405701.1;Note=Code: G%3B COG: COG3715;gbkey=CDS;product=PTS system sorbose transporter subunit IIC;protein_id=YP_405701.1;transl_table=11
NC_007606.1	RefSeq	gene	4042930	4043753	.	+	.	ID=gene4242;Dbxref=GeneID:3796489;Name=SDY_4316;Note=SDY4316;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4316;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	4043805	4045034	.	+	.	ID=gene4243;Dbxref=GeneID:3796490;Name=SDY_4317;Note=SDY4317;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4317
NC_007606.1	RefSeq	CDS	4043805	4045034	.	+	0	ID=cds3756;Parent=gene4243;Dbxref=Genbank:YP_405703.1,GeneID:3796490;Name=YP_405703.1;Note=Code: ER%3B COG: COG1063;gbkey=CDS;product=L-sorbose 1-phosphate dehydrogenase;protein_id=YP_405703.1;transl_table=11
NC_007606.1	RefSeq	gene	4045415	4046104	.	+	.	ID=gene4244;Dbxref=GeneID:3796491;Name=pepE;Note=''SDY4318%3B contains in-frame stop codon%3B original product: peptidase E%2C a dipeptidase where amino-terminal residue is aspartate'';gbkey=Gene;gene=pepE;gene_biotype=pseudogene;locus_tag=SDY_4318;pseudo=true
NC_007606.1	RefSeq	gene	4046194	4047750	.	-	.	ID=gene4245;Dbxref=GeneID:3796492;Name=yjbB;Note=SDY4319;gbkey=Gene;gene=yjbB;gene_biotype=protein_coding;locus_tag=SDY_4319
NC_007606.1	RefSeq	CDS	4046194	4047750	.	-	0	ID=cds3757;Parent=gene4245;Dbxref=Genbank:YP_405704.1,GeneID:3796492;Name=YP_405704.1;Note=Code: P%3B COG: COG1283;gbkey=CDS;gene=yjbB;product=alpha helix protein;protein_id=YP_405704.1;transl_table=11
NC_007606.1	RefSeq	region	4048066	4048833	.	-	.	ID=id659;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4048081	4048458	.	-	.	ID=gene4246;Dbxref=GeneID:3796493;Name=insB;Note=SDY4320;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4320
NC_007606.1	RefSeq	CDS	4048081	4048458	.	-	0	ID=cds3758;Parent=gene4246;Dbxref=Genbank:YP_405705.1,GeneID:3796493;Name=YP_405705.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405705.1;transl_table=11
NC_007606.1	RefSeq	gene	4048503	4048778	.	-	.	ID=gene4247;Dbxref=GeneID:3796494;Name=insA;Note=SDY4321;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4321
NC_007606.1	RefSeq	CDS	4048503	4048778	.	-	0	ID=cds3759;Parent=gene4247;Dbxref=Genbank:YP_405706.1,GeneID:3796494;Name=YP_405706.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405706.1;transl_table=11
NC_007606.1	RefSeq	gene	4048807	4052505	.	-	.	ID=gene4248;Dbxref=GeneID:3796495;Name=metH;Note=SDY4322;gbkey=Gene;gene=metH;gene_biotype=protein_coding;locus_tag=SDY_4322
NC_007606.1	RefSeq	CDS	4048807	4052505	.	-	0	ID=cds3760;Parent=gene4248;Dbxref=Genbank:YP_405707.1,GeneID:3796495;Name=YP_405707.1;Note=one of two methionine synthases in Escherichia coli%3B MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine%3B requires zinc for activity;gbkey=CDS;gene=metH;product=B12-dependent methionine synthase;protein_id=YP_405707.1;transl_table=11
NC_007606.1	RefSeq	gene	4052705	4053529	.	+	.	ID=gene4249;Dbxref=GeneID:3796496;Name=iclR;Note=SDY4323;gbkey=Gene;gene=iclR;gene_biotype=protein_coding;locus_tag=SDY_4323
NC_007606.1	RefSeq	CDS	4052705	4053529	.	+	0	ID=cds3761;Parent=gene4249;Dbxref=Genbank:YP_405708.2,GeneID:3796496;Name=YP_405708.2;Note=''regulates the glyoxylate bypass operon (aceBAK)%2C which encodes isocitrate lyase%2C malate synthase and isocitrate dehydrogenase kinase/phosphorylase'';gbkey=CDS;gene=iclR;product=IclR family transcriptional regulator;protein_id=YP_405708.2;transl_table=11
NC_007606.1	RefSeq	gene	4053847	4055277	.	+	.	ID=gene4250;Dbxref=GeneID:3796497;Name=arp;Note=SDY4324%3B contains in-frame stop codon%3B original product: regulator of acetyl CoA synthetase;gbkey=Gene;gene=arp;gene_biotype=pseudogene;locus_tag=SDY_4324;pseudo=true
NC_007606.1	RefSeq	region	4055274	4056039	.	-	.	ID=id660;gbkey=mobile_element;gene=arp
NC_007606.1	RefSeq	gene	4055288	4055683	.	-	.	ID=gene4251;Dbxref=GeneID:3796498;Name=SDY_4325;Note=SDY4325;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4325
NC_007606.1	RefSeq	CDS	4055288	4055683	.	-	0	ID=cds3762;Parent=gene4251;Dbxref=Genbank:YP_405709.1,GeneID:3796498;Name=YP_405709.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405709.1;transl_table=11
NC_007606.1	RefSeq	gene	4055710	4055982	.	-	.	ID=gene4252;Dbxref=GeneID:18263179;Name=SDY_4791;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4791
NC_007606.1	RefSeq	CDS	4055710	4055982	.	-	0	ID=cds3763;Parent=gene4252;Dbxref=Genbank:YP_009000865.1,GeneID:18263179;Name=YP_009000865.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000865.1;transl_table=11
NC_007606.1	RefSeq	gene	4056062	4057798	.	-	.	ID=gene4253;Dbxref=GeneID:3796500;Name=aceK;Note=SDY4327;gbkey=Gene;gene=aceK;gene_biotype=protein_coding;locus_tag=SDY_4327
NC_007606.1	RefSeq	CDS	4056062	4057798	.	-	0	ID=cds3764;Parent=gene4253;Dbxref=Genbank:YP_405711.1,GeneID:3796500;Name=YP_405711.1;Note=catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity%3B unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol;gbkey=CDS;gene=aceK;product=bifunctional isocitrate dehydrogenase kinase/phosphatase;protein_id=YP_405711.1;transl_table=11
NC_007606.1	RefSeq	gene	4057982	4059286	.	-	.	ID=gene4254;Dbxref=GeneID:3797899;Name=aceA;Note=SDY4328;gbkey=Gene;gene=aceA;gene_biotype=protein_coding;locus_tag=SDY_4328
NC_007606.1	RefSeq	CDS	4057982	4059286	.	-	0	ID=cds3765;Parent=gene4254;Dbxref=Genbank:YP_405712.1,GeneID:3797899;Name=YP_405712.1;Note=Code: C%3B COG: COG2224;gbkey=CDS;gene=aceA;product=isocitrate lyase;protein_id=YP_405712.1;transl_table=11
NC_007606.1	RefSeq	gene	4059316	4060894	.	-	.	ID=gene4255;Dbxref=GeneID:3797900;Name=aceB;Note=SDY4329%3B contains in-frame stop codon%3B original product: malate synthase A;gbkey=Gene;gene=aceB;gene_biotype=pseudogene;locus_tag=SDY_4329;pseudo=true
NC_007606.1	RefSeq	gene	4061145	4062074	.	-	.	ID=gene4256;Dbxref=GeneID:3797901;Name=metA;Note=SDY4330;gbkey=Gene;gene=metA;gene_biotype=protein_coding;locus_tag=SDY_4330
NC_007606.1	RefSeq	CDS	4061145	4062074	.	-	0	ID=cds3766;Parent=gene4256;Dbxref=Genbank:YP_405713.1,GeneID:3797901;Name=YP_405713.1;Note=catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis;gbkey=CDS;gene=metA;product=homoserine O-succinyltransferase;protein_id=YP_405713.1;transl_table=11
NC_007606.1	RefSeq	region	4062193	4062960	.	-	.	ID=id661;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4062208	4062585	.	-	.	ID=gene4257;Dbxref=GeneID:3797902;Name=insB;Note=SDY4331;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4331
NC_007606.1	RefSeq	CDS	4062208	4062585	.	-	0	ID=cds3767;Parent=gene4257;Dbxref=Genbank:YP_405714.1,GeneID:3797902;Name=YP_405714.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion sequence element IS1 transposase;protein_id=YP_405714.1;transl_table=11
NC_007606.1	RefSeq	gene	4062630	4062905	.	-	.	ID=gene4258;Dbxref=GeneID:3797903;Name=insA;Note=SDY4332;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4332
NC_007606.1	RefSeq	CDS	4062630	4062905	.	-	0	ID=cds3768;Parent=gene4258;Dbxref=Genbank:YP_405715.1,GeneID:3797903;Name=YP_405715.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405715.1;transl_table=11
NC_007606.1	RefSeq	gene	4063007	4063450	.	+	.	ID=gene4259;Dbxref=GeneID:3797904;Name=yjaB;Note=SDY4333;gbkey=Gene;gene=yjaB;gene_biotype=protein_coding;locus_tag=SDY_4333
NC_007606.1	RefSeq	CDS	4063007	4063450	.	+	0	ID=cds3769;Parent=gene4259;Dbxref=Genbank:YP_405716.1,GeneID:3797904;Name=YP_405716.1;Note=Code: KR%3B COG: COG0454;gbkey=CDS;gene=yjaB;product=hypothetical protein;protein_id=YP_405716.1;transl_table=11
NC_007606.1	RefSeq	gene	4063514	4063897	.	-	.	ID=gene4260;Dbxref=GeneID:3797905;Name=yjaA;Note=SDY4334;gbkey=Gene;gene=yjaA;gene_biotype=protein_coding;locus_tag=SDY_4334
NC_007606.1	RefSeq	CDS	4063514	4063897	.	-	0	ID=cds3770;Parent=gene4260;Dbxref=Genbank:YP_405717.1,GeneID:3797905;Name=YP_405717.1;gbkey=CDS;gene=yjaA;product=hypothetical protein;protein_id=YP_405717.1;transl_table=11
NC_007606.1	RefSeq	region	4063955	4065381	.	+	.	ID=id662;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4064021	4065367	.	+	.	ID=gene4261;Dbxref=GeneID:3797906;Name=SDY_4335;Note=SDY4335;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4335
NC_007606.1	RefSeq	CDS	4064021	4065367	.	+	0	ID=cds3771;Parent=gene4261;Dbxref=Genbank:YP_405718.1,GeneID:3797906;Name=YP_405718.1;Note=Code: L%3B COG: COG3385;gbkey=CDS;product=insertion sequence element IS4 transposase InsG;protein_id=YP_405718.1;transl_table=11
NC_007606.1	RefSeq	gene	4065431	4065745	.	-	.	ID=gene4262;Dbxref=GeneID:3797907;Name=xylF;Note=SDY4336%3B truncated%3B original product: xylose binding protein transport system;gbkey=Gene;gene=xylF;gene_biotype=pseudogene;locus_tag=SDY_4336;pseudo=true
NC_007606.1	RefSeq	region	4065837	4066518	.	+	.	ID=id663;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4065894	4066166	.	+	.	ID=gene4263;Dbxref=GeneID:18263180;Name=SDY_4792;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4792
NC_007606.1	RefSeq	CDS	4065894	4066166	.	+	0	ID=cds3772;Parent=gene4263;Dbxref=Genbank:YP_009000866.1,GeneID:18263180;Name=YP_009000866.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000866.1;transl_table=11
NC_007606.1	RefSeq	gene	4066193	4066540	.	+	.	ID=gene4264;Dbxref=GeneID:3797908;Name=SDY_4337;Note=SDY4337;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4337
NC_007606.1	RefSeq	CDS	4066193	4066540	.	+	0	ID=cds3773;Parent=gene4264;Dbxref=Genbank:YP_405719.1,GeneID:3797908;Name=YP_405719.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405719.1;transl_table=11
NC_007606.1	RefSeq	region	4066519	4067286	.	+	.	ID=id664;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4066574	4066849	.	+	.	ID=gene4265;Dbxref=GeneID:3797909;Name=insA;Note=SDY4338;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4338
NC_007606.1	RefSeq	CDS	4066574	4066849	.	+	0	ID=cds3774;Parent=gene4265;Dbxref=Genbank:YP_405720.1,GeneID:3797909;Name=YP_405720.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405720.1;transl_table=11
NC_007606.1	RefSeq	gene	4066894	4067271	.	+	.	ID=gene4266;Dbxref=GeneID:3797910;Name=insB;Note=SDY4339;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4339
NC_007606.1	RefSeq	CDS	4066894	4067271	.	+	0	ID=cds3775;Parent=gene4266;Dbxref=Genbank:YP_405721.1,GeneID:3797910;Name=YP_405721.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405721.1;transl_table=11
NC_007606.1	RefSeq	gene	4067282	4068280	.	-	.	ID=gene4267;Dbxref=GeneID:3797911;Name=yiaH;Note=SDY4340;gbkey=Gene;gene=yiaH;gene_biotype=protein_coding;locus_tag=SDY_4340
NC_007606.1	RefSeq	CDS	4067282	4068280	.	-	0	ID=cds3776;Parent=gene4267;Dbxref=Genbank:YP_405722.1,GeneID:3797911;Name=YP_405722.1;Note=Code: S%3B COG: COG3274;gbkey=CDS;gene=yiaH;product=hypothetical protein;protein_id=YP_405722.1;transl_table=11
NC_007606.1	RefSeq	region	4068354	4069619	.	+	.	ID=id665;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4068418	4068720	.	+	.	ID=gene4268;Dbxref=GeneID:3797912;Name=SDY_4341;Note=SDY4341;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4341
NC_007606.1	RefSeq	CDS	4068418	4068720	.	+	0	ID=cds3777;Parent=gene4268;Dbxref=Genbank:YP_405723.1,GeneID:3797912;Name=YP_405723.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_405723.1;transl_table=11
NC_007606.1	RefSeq	gene	4068861	4069691	.	+	.	ID=gene4269;Dbxref=GeneID:3797913;Name=SDY_4342;Note=SDY4342;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4342
NC_007606.1	RefSeq	CDS	4068861	4069691	.	+	0	ID=cds3778;Parent=gene4269;Dbxref=Genbank:YP_405724.1,GeneID:3797913;Name=YP_405724.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_405724.1;transl_table=11
NC_007606.1	RefSeq	gene	4069724	4070023	.	+	.	ID=gene4270;Dbxref=GeneID:3797914;Name=SDY_4343;Note=SDY4343;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4343
NC_007606.1	RefSeq	CDS	4069724	4070023	.	+	0	ID=cds3779;Parent=gene4270;Dbxref=Genbank:YP_405725.1,GeneID:3797914;Name=YP_405725.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405725.1;transl_table=11
NC_007606.1	RefSeq	gene	4070118	4071029	.	+	.	ID=gene4271;Dbxref=GeneID:3797915;Name=glyQ;Note=SDY4344;gbkey=Gene;gene=glyQ;gene_biotype=protein_coding;locus_tag=SDY_4344
NC_007606.1	RefSeq	CDS	4070118	4071029	.	+	0	ID=cds3780;Parent=gene4271;Dbxref=Genbank:YP_405726.1,GeneID:3797915;Name=YP_405726.1;Note=glycine--tRNA ligase alpha chain%3B GlyRS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyQ;product=glycyl-tRNA synthetase subunit alpha;protein_id=YP_405726.1;transl_table=11
NC_007606.1	RefSeq	gene	4071039	4073108	.	+	.	ID=gene4272;Dbxref=GeneID:3797916;Name=glyS;Note=SDY4345;gbkey=Gene;gene=glyS;gene_biotype=protein_coding;locus_tag=SDY_4345
NC_007606.1	RefSeq	CDS	4071039	4073108	.	+	0	ID=cds3781;Parent=gene4272;Dbxref=Genbank:YP_405727.1,GeneID:3797916;Name=YP_405727.1;Note=glycine--tRNA ligase beta chain%3B glyS%3B class II aminoacyl tRNA synthetase%3B tetramer of alpha(2)beta(2)%3B catalyzes a two-step reaction%3B first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=glyS;product=glycyl-tRNA synthetase subunit beta;protein_id=YP_405727.1;transl_table=11
NC_007606.1	RefSeq	gene	4073431	4073583	.	+	.	ID=gene4273;Dbxref=GeneID:3797917;Name=yiaZ;Note=SDY4346;gbkey=Gene;gene=yiaZ;gene_biotype=protein_coding;locus_tag=SDY_4346
NC_007606.1	RefSeq	CDS	4073431	4073583	.	+	0	ID=cds3782;Parent=gene4273;Dbxref=Genbank:YP_405728.1,GeneID:3797917;Name=YP_405728.1;gbkey=CDS;gene=yiaZ;product=small toxic polypeptide;protein_id=YP_405728.1;transl_table=11
NC_007606.1	RefSeq	gene	4073771	4073983	.	-	.	ID=gene4274;Dbxref=GeneID:3798157;Name=cspA;Note=SDY4347;gbkey=Gene;gene=cspA;gene_biotype=protein_coding;locus_tag=SDY_4347
NC_007606.1	RefSeq	CDS	4073771	4073983	.	-	0	ID=cds3783;Parent=gene4274;Dbxref=Genbank:YP_405729.1,GeneID:3798157;Name=YP_405729.1;Note=Code: K%3B COG: COG1278;gbkey=CDS;gene=cspA;product=cold-shock protein;protein_id=YP_405729.1;transl_table=11
NC_007606.1	RefSeq	gene	4074264	4074554	.	-	.	ID=gene4275;Dbxref=GeneID:3798158;Name=yiaG;Note=SDY4348;gbkey=Gene;gene=yiaG;gene_biotype=protein_coding;locus_tag=SDY_4348
NC_007606.1	RefSeq	CDS	4074264	4074554	.	-	0	ID=cds3784;Parent=gene4275;Dbxref=Genbank:YP_405730.1,GeneID:3798158;Name=YP_405730.1;Note=Code: K%3B COG: COG2944;gbkey=CDS;gene=yiaG;product=transcriptional regulator;protein_id=YP_405730.1;transl_table=11
NC_007606.1	RefSeq	gene	4074812	4075642	.	+	.	ID=gene4276;Dbxref=GeneID:3798159;Name=yiaF;Note=SDY4349;gbkey=Gene;gene=yiaF;gene_biotype=protein_coding;locus_tag=SDY_4349
NC_007606.1	RefSeq	CDS	4074812	4075642	.	+	0	ID=cds3785;Parent=gene4276;Dbxref=Genbank:YP_405731.1,GeneID:3798159;Name=YP_405731.1;gbkey=CDS;gene=yiaF;product=hypothetical protein;protein_id=YP_405731.1;transl_table=11
NC_007606.1	RefSeq	gene	4075692	4076666	.	-	.	ID=gene4277;Dbxref=GeneID:3798160;Name=yiaE;Note=SDY4350;gbkey=Gene;gene=yiaE;gene_biotype=protein_coding;locus_tag=SDY_4350
NC_007606.1	RefSeq	CDS	4075692	4076666	.	-	0	ID=cds3786;Parent=gene4277;Dbxref=Genbank:YP_405732.2,GeneID:3798160;Name=YP_405732.2;Note=Code: CHR%3B COG: COG1052;gbkey=CDS;gene=yiaE;product=dehydrogenase;protein_id=YP_405732.2;transl_table=11
NC_007606.1	RefSeq	gene	4076770	4077213	.	-	.	ID=gene4278;Dbxref=GeneID:3798161;Name=yiaD;Note=SDY4351%3B truncated%3B original product:  outer membrane protein;gbkey=Gene;gene=yiaD;gene_biotype=pseudogene;locus_tag=SDY_4351;pseudo=true
NC_007606.1	RefSeq	gene	4077283	4079502	.	+	.	ID=gene4279;Dbxref=GeneID:3798162;Name=bisC;Note=SDY4352;gbkey=Gene;gene=bisC;gene_biotype=protein_coding;locus_tag=SDY_4352
NC_007606.1	RefSeq	CDS	4077283	4079502	.	+	0	ID=cds3787;Parent=gene4279;Dbxref=Genbank:YP_405733.1,GeneID:3798162;Name=YP_405733.1;Note=Code: C%3B COG: COG0243;gbkey=CDS;gene=bisC;product=biotin sulfoxide reductase;protein_id=YP_405733.1;transl_table=11
NC_007606.1	RefSeq	gene	4079908	4080471	.	-	.	ID=gene4280;Dbxref=GeneID:3798163;Name=tag;Note=SDY4353;gbkey=Gene;gene=tag;gene_biotype=protein_coding;locus_tag=SDY_4353
NC_007606.1	RefSeq	CDS	4079908	4080471	.	-	0	ID=cds3788;Parent=gene4280;Dbxref=Genbank:YP_405734.1,GeneID:3798163;Name=YP_405734.1;Note=''constitutive%2C catalyzes the hydrolysis of alkylated DNA%2C releasing 3-methyladenine'';gbkey=CDS;gene=tag;product=3-methyladenine DNA glycosylase;protein_id=YP_405734.1;transl_table=11
NC_007606.1	RefSeq	gene	4080623	4081327	.	+	.	ID=gene4281;Dbxref=GeneID:3798164;Name=yhjY;Note=SDY4354%3B contains in-frame stop codon%3B original product:  lipase;gbkey=Gene;gene=yhjY;gene_biotype=pseudogene;locus_tag=SDY_4354;pseudo=true
NC_007606.1	RefSeq	gene	4081556	4082758	.	+	.	ID=gene4282;Dbxref=GeneID:3798165;Name=SDY_4355;Note=SDY4355;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4355;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	4082774	4083539	.	+	.	ID=id666;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4082831	4083103	.	+	.	ID=gene4283;Dbxref=GeneID:18263181;Name=SDY_4793;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4793
NC_007606.1	RefSeq	CDS	4082831	4083103	.	+	0	ID=cds3789;Parent=gene4283;Dbxref=Genbank:YP_009000867.1,GeneID:18263181;Name=YP_009000867.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000867.1;transl_table=11
NC_007606.1	RefSeq	gene	4083130	4083525	.	+	.	ID=gene4284;Dbxref=GeneID:3798166;Name=SDY_4356;Note=SDY4356;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4356
NC_007606.1	RefSeq	CDS	4083130	4083525	.	+	0	ID=cds3790;Parent=gene4284;Dbxref=Genbank:YP_405736.1,GeneID:3798166;Name=YP_405736.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405736.1;transl_table=11
NC_007606.1	RefSeq	gene	4083607	4083909	.	-	.	ID=gene4285;Dbxref=GeneID:3798167;Name=yjfN;Note=SDY4357;gbkey=Gene;gene=yjfN;gene_biotype=protein_coding;locus_tag=SDY_4357
NC_007606.1	RefSeq	CDS	4083607	4083909	.	-	0	ID=cds3791;Parent=gene4285;Dbxref=Genbank:YP_405737.1,GeneID:3798167;Name=YP_405737.1;gbkey=CDS;gene=yjfN;product=hypothetical protein;protein_id=YP_405737.1;transl_table=11
NC_007606.1	RefSeq	gene	4084031	4084360	.	-	.	ID=gene4286;Dbxref=GeneID:3798168;Name=yjfO;Note=SDY4358;gbkey=Gene;gene=yjfO;gene_biotype=protein_coding;locus_tag=SDY_4358
NC_007606.1	RefSeq	CDS	4084031	4084360	.	-	0	ID=cds3792;Parent=gene4286;Dbxref=Genbank:YP_405738.2,GeneID:3798168;Name=YP_405738.2;gbkey=CDS;gene=yjfO;product=hypothetical protein;protein_id=YP_405738.2;transl_table=11
NC_007606.1	RefSeq	gene	4084542	4085291	.	+	.	ID=gene4287;Dbxref=GeneID:3798169;Name=yjfP;Note=SDY4359;gbkey=Gene;gene=yjfP;gene_biotype=protein_coding;locus_tag=SDY_4359
NC_007606.1	RefSeq	CDS	4084542	4085291	.	+	0	ID=cds3793;Parent=gene4287;Dbxref=Genbank:YP_405739.1,GeneID:3798169;Name=YP_405739.1;Note=YjfP%3B esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro%3B unknown function and substrate in vivo;gbkey=CDS;gene=yjfP;product=esterase;protein_id=YP_405739.1;transl_table=11
NC_007606.1	RefSeq	gene	4085288	4086043	.	-	.	ID=gene4288;Dbxref=GeneID:3798170;Name=yjfQ;Note=SDY4360;gbkey=Gene;gene=yjfQ;gene_biotype=protein_coding;locus_tag=SDY_4360
NC_007606.1	RefSeq	CDS	4085288	4086043	.	-	0	ID=cds3794;Parent=gene4288;Dbxref=Genbank:YP_405740.1,GeneID:3798170;Name=YP_405740.1;Note=negative regulator of ulaG and ulaABCDEF;gbkey=CDS;gene=yjfQ;product=transcriptional repressor UlaR;protein_id=YP_405740.1;transl_table=11
NC_007606.1	RefSeq	gene	4086151	4087215	.	-	.	ID=gene4289;Dbxref=GeneID:3798171;Name=yjfR;Note=SDY4361;gbkey=Gene;gene=yjfR;gene_biotype=pseudogene;locus_tag=SDY_4361;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	4087560	4088957	.	+	.	ID=gene4290;Dbxref=GeneID:3798172;Name=ulaA;Note=SDY4362;gbkey=Gene;gene=ulaA;gene_biotype=protein_coding;gene_synonym=sgaT;locus_tag=SDY_4362
NC_007606.1	RefSeq	CDS	4087560	4088957	.	+	0	ID=cds3795;Parent=gene4290;Dbxref=Genbank:YP_405742.2,GeneID:3798172;Name=YP_405742.2;Note=membrane component%3B functions with enzymes IIB (sgaB%3B ulaB) and IIA (sgaA%3B ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate%3B sgaTBA are regulated by yifQ as well as Crp and Fnr;gbkey=CDS;gene=ulaA;product=PTS system ascorbate-specific transporter subunit IIC;protein_id=YP_405742.2;transl_table=11
NC_007606.1	RefSeq	gene	4088973	4089278	.	+	.	ID=gene4291;Dbxref=GeneID:3798173;Name=sgaB;Note=SDY4363;gbkey=Gene;gene=sgaB;gene_biotype=protein_coding;locus_tag=SDY_4363
NC_007606.1	RefSeq	CDS	4088973	4089278	.	+	0	ID=cds3796;Parent=gene4291;Dbxref=Genbank:YP_405743.1,GeneID:3798173;Name=YP_405743.1;Note=Code: G%3B COG: COG3414;gbkey=CDS;gene=sgaB;product=PTS system L-ascorbate-specific transporter subunit IIB;protein_id=YP_405743.1;transl_table=11
NC_007606.1	RefSeq	gene	4089288	4089752	.	+	.	ID=gene4292;Dbxref=GeneID:3798174;Name=ptxA;Note=SDY4364;gbkey=Gene;gene=ptxA;gene_biotype=protein_coding;locus_tag=SDY_4364
NC_007606.1	RefSeq	CDS	4089288	4089752	.	+	0	ID=cds3797;Parent=gene4292;Dbxref=Genbank:YP_405744.1,GeneID:3798174;Name=YP_405744.1;Note=Code: GT%3B COG: COG1762;gbkey=CDS;gene=ptxA;product=PTS system L-ascorbate-specific transporter subunit IIA;protein_id=YP_405744.1;transl_table=11
NC_007606.1	RefSeq	gene	4089766	4090416	.	+	.	ID=gene4293;Dbxref=GeneID:3798175;Name=ulaD;Note=SDY4365;gbkey=Gene;gene=ulaD;gene_biotype=protein_coding;locus_tag=SDY_4365
NC_007606.1	RefSeq	CDS	4089766	4090416	.	+	0	ID=cds3798;Parent=gene4293;Dbxref=Genbank:YP_405745.1,GeneID:3798175;Name=YP_405745.1;Note=catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization;gbkey=CDS;gene=ulaD;product=3-keto-L-gulonate-6-phosphate decarboxylase;protein_id=YP_405745.1;transl_table=11
NC_007606.1	RefSeq	gene	4090426	4091280	.	+	.	ID=gene4294;Dbxref=GeneID:3798176;Name=sgaU;Note=SDY4366%3B contains in-frame stop codon%3B original product:  hexulose-6-phosphate isomerase;gbkey=Gene;gene=sgaU;gene_biotype=pseudogene;locus_tag=SDY_4366;pseudo=true
NC_007606.1	RefSeq	gene	4091280	4091966	.	+	.	ID=gene4295;Dbxref=GeneID:3797690;Name=sgaE;Note=SDY4367;gbkey=Gene;gene=sgaE;gene_biotype=protein_coding;gene_synonym=ulaF;locus_tag=SDY_4367
NC_007606.1	RefSeq	CDS	4091280	4091966	.	+	0	ID=cds3799;Parent=gene4295;Dbxref=Genbank:YP_405746.1,GeneID:3797690;Name=YP_405746.1;Note=catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate%3B links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source;gbkey=CDS;gene=sgaE;product=L-ribulose-5-phosphate 4-epimerase;protein_id=YP_405746.1;transl_table=11
NC_007606.1	RefSeq	gene	4092095	4092370	.	-	.	ID=gene4296;Dbxref=GeneID:3797691;Name=yjfY;Note=''SDY4368%3B contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yjfY;gene_biotype=pseudogene;locus_tag=SDY_4368;pseudo=true
NC_007606.1	RefSeq	gene	4092697	4093092	.	+	.	ID=gene4297;Dbxref=GeneID:3797692;Name=rpsF;Note=SDY4369;gbkey=Gene;gene=rpsF;gene_biotype=protein_coding;locus_tag=SDY_4369
NC_007606.1	RefSeq	CDS	4092697	4093092	.	+	0	ID=cds3800;Parent=gene4297;Dbxref=Genbank:YP_405747.1,GeneID:3797692;Name=YP_405747.1;Note=''binds cooperatively with S18 to the S15-16S complex%2C allowing platform assembly to continue with S11 and S21'';gbkey=CDS;gene=rpsF;product=30S ribosomal protein S6;protein_id=YP_405747.1;transl_table=11
NC_007606.1	RefSeq	gene	4093099	4093413	.	+	.	ID=gene4298;Dbxref=GeneID:3797693;Name=priB;Note=SDY4370;gbkey=Gene;gene=priB;gene_biotype=protein_coding;locus_tag=SDY_4370
NC_007606.1	RefSeq	CDS	4093099	4093413	.	+	0	ID=cds3801;Parent=gene4298;Dbxref=Genbank:YP_405748.1,GeneID:3797693;Name=YP_405748.1;Note=binds single-stranded DNA at the primosome assembly site;gbkey=CDS;gene=priB;product=primosomal replication protein N;protein_id=YP_405748.1;transl_table=11
NC_007606.1	RefSeq	gene	4093418	4093645	.	+	.	ID=gene4299;Dbxref=GeneID:3797694;Name=rpsR;Note=SDY4371;gbkey=Gene;gene=rpsR;gene_biotype=protein_coding;locus_tag=SDY_4371
NC_007606.1	RefSeq	CDS	4093418	4093645	.	+	0	ID=cds3802;Parent=gene4299;Dbxref=Genbank:YP_405749.1,GeneID:3797694;Name=YP_405749.1;Note=binds as a heterodimer with protein S6 to the central domain of the 16S rRNA%3B helps stabilize the platform of the 30S subunit;gbkey=CDS;gene=rpsR;product=30S ribosomal protein S18;protein_id=YP_405749.1;transl_table=11
NC_007606.1	RefSeq	gene	4093687	4094136	.	+	.	ID=gene4300;Dbxref=GeneID:3797695;Name=rplI;Note=SDY4372;gbkey=Gene;gene=rplI;gene_biotype=protein_coding;locus_tag=SDY_4372
NC_007606.1	RefSeq	CDS	4093687	4094136	.	+	0	ID=cds3803;Parent=gene4300;Dbxref=Genbank:YP_405750.1,GeneID:3797695;Name=YP_405750.1;Note=in Escherichia coli this protein is wrapped around the base of the L1 stalk;gbkey=CDS;gene=rplI;product=50S ribosomal protein L9;protein_id=YP_405750.1;transl_table=11
NC_007606.1	RefSeq	region	4094990	4095758	.	-	.	ID=id667;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4095003	4095398	.	-	.	ID=gene4301;Dbxref=GeneID:3797696;Name=SDY_4373;Note=SDY4373;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4373
NC_007606.1	RefSeq	CDS	4095003	4095398	.	-	0	ID=cds3804;Parent=gene4301;Dbxref=Genbank:YP_405751.1,GeneID:3797696;Name=YP_405751.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405751.1;transl_table=11
NC_007606.1	RefSeq	gene	4095425	4095697	.	-	.	ID=gene4302;Dbxref=GeneID:18263182;Name=SDY_4794;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4794
NC_007606.1	RefSeq	CDS	4095425	4095697	.	-	0	ID=cds3805;Parent=gene4302;Dbxref=Genbank:YP_009000868.1,GeneID:18263182;Name=YP_009000868.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000868.1;transl_table=11
NC_007606.1	RefSeq	region	4095779	4096546	.	+	.	ID=id668;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4095834	4096109	.	+	.	ID=gene4303;Dbxref=GeneID:3797697;Name=insA;Note=SDY4374;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4374
NC_007606.1	RefSeq	CDS	4095834	4096109	.	+	0	ID=cds3806;Parent=gene4303;Dbxref=Genbank:YP_405752.1,GeneID:3797697;Name=YP_405752.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405752.1;transl_table=11
NC_007606.1	RefSeq	gene	4096154	4096531	.	+	.	ID=gene4304;Dbxref=GeneID:3797698;Name=insB;Note=SDY4375;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4375
NC_007606.1	RefSeq	CDS	4096154	4096531	.	+	0	ID=cds3807;Parent=gene4304;Dbxref=Genbank:YP_405753.1,GeneID:3797698;Name=YP_405753.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405753.1;transl_table=11
NC_007606.1	RefSeq	gene	4096641	4097315	.	-	.	ID=gene4305;Dbxref=GeneID:3797699;Name=ytfB;Note=SDY4376;gbkey=Gene;gene=ytfB;gene_biotype=protein_coding;locus_tag=SDY_4376
NC_007606.1	RefSeq	CDS	4096641	4097315	.	-	0	ID=cds3808;Parent=gene4305;Dbxref=Genbank:YP_405754.1,GeneID:3797699;Name=YP_405754.1;Note=Code: M%3B COG: COG3061;gbkey=CDS;gene=ytfB;product=hypothetical protein;protein_id=YP_405754.1;transl_table=11
NC_007606.1	RefSeq	gene	4097497	4098117	.	+	.	ID=gene4306;Dbxref=GeneID:3797700;Name=fklB;Note=SDY4377;gbkey=Gene;gene=fklB;gene_biotype=protein_coding;locus_tag=SDY_4377
NC_007606.1	RefSeq	CDS	4097497	4098117	.	+	0	ID=cds3809;Parent=gene4306;Dbxref=Genbank:YP_405755.2,GeneID:3797700;Name=YP_405755.2;Note=FKBP-type%3B rotamase%3B catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides;gbkey=CDS;gene=fklB;product=peptidyl-prolyl cis-trans isomerase;protein_id=YP_405755.2;transl_table=11
NC_007606.1	RefSeq	gene	4098426	4099838	.	+	.	ID=gene4307;Dbxref=GeneID:3797701;Name=cycA;Note=SDY4378;gbkey=Gene;gene=cycA;gene_biotype=protein_coding;locus_tag=SDY_4378
NC_007606.1	RefSeq	CDS	4098426	4099838	.	+	0	ID=cds3810;Parent=gene4307;Dbxref=Genbank:YP_405756.1,GeneID:3797701;Name=YP_405756.1;Note=''involved in the transport across the cytoplasmic membrane of D-alanine%2C D-serine and glycine'';gbkey=CDS;gene=cycA;product=D-alanine/D-serine/glycine permease;protein_id=YP_405756.1;transl_table=11
NC_007606.1	RefSeq	gene	4099883	4100545	.	-	.	ID=gene4308;Dbxref=GeneID:3797702;Name=ytfE;Note=SDY4379;gbkey=Gene;gene=ytfE;gene_biotype=protein_coding;locus_tag=SDY_4379
NC_007606.1	RefSeq	CDS	4099883	4100545	.	-	0	ID=cds3811;Parent=gene4308;Dbxref=Genbank:YP_405757.1,GeneID:3797702;Name=YP_405757.1;Note=Involved in anaerobic NO protection and iron metabolism;gbkey=CDS;gene=ytfE;product=iron-sulfur cluster repair di-iron protein;protein_id=YP_405757.1;transl_table=11
NC_007606.1	RefSeq	gene	4100648	4101622	.	-	.	ID=gene4309;Dbxref=GeneID:3797703;Name=ytfF;Note=SDY4380;gbkey=Gene;gene=ytfF;gene_biotype=protein_coding;locus_tag=SDY_4380
NC_007606.1	RefSeq	CDS	4100648	4101622	.	-	0	ID=cds3812;Parent=gene4309;Dbxref=Genbank:YP_405758.1,GeneID:3797703;Name=YP_405758.1;Note=Code: GER%3B COG: COG0697;gbkey=CDS;gene=ytfF;product=transmembrane subunit;protein_id=YP_405758.1;transl_table=11
NC_007606.1	RefSeq	gene	4101721	4102581	.	-	.	ID=gene4310;Dbxref=GeneID:3797705;Name=ytfG;Note=SDY4382;gbkey=Gene;gene=ytfG;gene_biotype=protein_coding;locus_tag=SDY_4382
NC_007606.1	RefSeq	CDS	4101721	4102581	.	-	0	ID=cds3813;Parent=gene4310;Dbxref=Genbank:YP_405759.1,GeneID:3797705;Name=YP_405759.1;Note=Code: MG%3B COG: COG0702;gbkey=CDS;gene=ytfG;product=oxidoreductase;protein_id=YP_405759.1;transl_table=11
NC_007606.1	RefSeq	gene	4102580	4103050	.	+	.	ID=gene4311;Dbxref=GeneID:3797704;Name=ytfH;Note=SDY4381;gbkey=Gene;gene=ytfH;gene_biotype=protein_coding;locus_tag=SDY_4381
NC_007606.1	RefSeq	CDS	4102580	4103050	.	+	0	ID=cds3814;Parent=gene4311;Dbxref=Genbank:YP_405760.1,GeneID:3797704;Name=YP_405760.1;Note=Code: K%3B COG: COG1733;gbkey=CDS;gene=ytfH;product=hypothetical protein;protein_id=YP_405760.1;transl_table=11
NC_007606.1	RefSeq	gene	4103167	4105116	.	-	.	ID=gene4312;Dbxref=GeneID:3797706;Name=cpdB;Note=SDY4383;gbkey=Gene;gene=cpdB;gene_biotype=protein_coding;locus_tag=SDY_4383
NC_007606.1	RefSeq	CDS	4103167	4105116	.	-	0	ID=cds3815;Parent=gene4312;Dbxref=Genbank:YP_405761.1,GeneID:3797706;Name=YP_405761.1;Note=''periplasmic enzyme%3B functions during ribonucleic acid degradation%3B 2'%2C3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate'';gbkey=CDS;gene=cpdB;product=bifunctional 2'%2C3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein;protein_id=YP_405761.1;transl_table=11
NC_007606.1	RefSeq	region	4105100	4105868	.	-	.	ID=id669;gbkey=mobile_element;gene=cpdB
NC_007606.1	RefSeq	gene	4105117	4105512	.	-	.	ID=gene4313;Dbxref=GeneID:3797707;Name=SDY_4384;Note=SDY4384;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4384
NC_007606.1	RefSeq	CDS	4105117	4105512	.	-	0	ID=cds3816;Parent=gene4313;Dbxref=Genbank:YP_405762.1,GeneID:3797707;Name=YP_405762.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405762.1;transl_table=11
NC_007606.1	RefSeq	gene	4105539	4105811	.	-	.	ID=gene4314;Dbxref=GeneID:18263183;Name=SDY_4795;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4795
NC_007606.1	RefSeq	CDS	4105539	4105811	.	-	0	ID=cds3817;Parent=gene4314;Dbxref=Genbank:YP_009000869.1,GeneID:18263183;Name=YP_009000869.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000869.1;transl_table=11
NC_007606.1	RefSeq	gene	4106074	4106814	.	+	.	ID=gene4315;Dbxref=GeneID:3797708;Name=cysQ;Note=SDY4385;gbkey=Gene;gene=cysQ;gene_biotype=protein_coding;locus_tag=SDY_4385
NC_007606.1	RefSeq	CDS	4106074	4106814	.	+	0	ID=cds3818;Parent=gene4315;Dbxref=Genbank:YP_405763.1,GeneID:3797708;Name=YP_405763.1;Note=''catalyzes the formation of AMP from adenosine-3'%2C5'-bisphosphate'';gbkey=CDS;gene=cysQ;product=adenosine-3'(2')%2C5'-bisphosphate nucleotidase;protein_id=YP_405763.1;transl_table=11
NC_007606.1	RefSeq	region	4106986	4107753	.	-	.	ID=id670;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4107001	4107378	.	-	.	ID=gene4316;Dbxref=GeneID:3798197;Name=insB;Note=SDY4386;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4386
NC_007606.1	RefSeq	CDS	4107001	4107378	.	-	0	ID=cds3819;Parent=gene4316;Dbxref=Genbank:YP_405764.1,GeneID:3798197;Name=YP_405764.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405764.1;transl_table=11
NC_007606.1	RefSeq	gene	4107423	4107698	.	-	.	ID=gene4317;Dbxref=GeneID:3798198;Name=insA;Note=SDY4387;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4387
NC_007606.1	RefSeq	CDS	4107423	4107698	.	-	0	ID=cds3820;Parent=gene4317;Dbxref=Genbank:YP_405765.1,GeneID:3798198;Name=YP_405765.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405765.1;transl_table=11
NC_007606.1	RefSeq	region	4107754	4108520	.	-	.	ID=id671;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4107769	4108164	.	-	.	ID=gene4318;Dbxref=GeneID:3798199;Name=SDY_4388;Note=SDY4388;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4388
NC_007606.1	RefSeq	CDS	4107769	4108164	.	-	0	ID=cds3821;Parent=gene4318;Dbxref=Genbank:YP_405766.1,GeneID:3798199;Name=YP_405766.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405766.1;transl_table=11
NC_007606.1	RefSeq	gene	4108191	4108463	.	-	.	ID=gene4319;Dbxref=GeneID:18263184;Name=SDY_4796;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4796
NC_007606.1	RefSeq	CDS	4108191	4108463	.	-	0	ID=cds3822;Parent=gene4319;Dbxref=Genbank:YP_009000870.1,GeneID:18263184;Name=YP_009000870.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000870.1;transl_table=11
NC_007606.1	RefSeq	gene	4108569	4109597	.	-	.	ID=gene4320;Dbxref=GeneID:3798200;Name=yjeK;Note=SDY4389;gbkey=Gene;gene=yjeK;gene_biotype=protein_coding;locus_tag=SDY_4389
NC_007606.1	RefSeq	CDS	4108569	4109597	.	-	0	ID=cds3823;Parent=gene4320;Dbxref=Genbank:YP_405767.1,GeneID:3798200;Name=YP_405767.1;Note=Code: E%3B COG: COG1509;gbkey=CDS;gene=yjeK;product=hypothetical protein;protein_id=YP_405767.1;transl_table=11
NC_007606.1	RefSeq	gene	4109639	4110205	.	+	.	ID=gene4321;Dbxref=GeneID:3798201;Name=efp;Note=SDY4390;gbkey=Gene;gene=efp;gene_biotype=protein_coding;locus_tag=SDY_4390
NC_007606.1	RefSeq	CDS	4109639	4110205	.	+	0	ID=cds3824;Parent=gene4321;Dbxref=Genbank:YP_405768.1,GeneID:3798201;Name=YP_405768.1;Note=Involved in peptide bond synthesis%3B alters the affinity of the ribosome for aminoacyl-tRNA;gbkey=CDS;gene=efp;product=elongation factor P;protein_id=YP_405768.1;transl_table=11
NC_007606.1	RefSeq	gene	4110257	4110382	.	+	.	ID=gene4322;Dbxref=GeneID:3798202;Name=SDY_4391;Note=SDY4391;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4391
NC_007606.1	RefSeq	CDS	4110257	4110382	.	+	0	ID=cds3825;Parent=gene4322;Dbxref=Genbank:YP_405769.1,GeneID:3798202;Name=YP_405769.1;Note=acts as and antidote to the bacteriolytic entericidin B in the EcnAB toxin-antitoxin complex;gbkey=CDS;product=entericidin A;protein_id=YP_405769.1;transl_table=11
NC_007606.1	RefSeq	gene	4110815	4111132	.	+	.	ID=gene4323;Dbxref=GeneID:3798203;Name=sugE;Note=SDY4392;gbkey=Gene;gene=sugE;gene_biotype=protein_coding;locus_tag=SDY_4392
NC_007606.1	RefSeq	CDS	4110815	4111132	.	+	0	ID=cds3826;Parent=gene4323;Dbxref=Genbank:YP_405770.2,GeneID:3798203;Name=YP_405770.2;Note=Code: P%3B COG: COG2076;gbkey=CDS;gene=sugE;product=SugE protein;protein_id=YP_405770.2;transl_table=11
NC_007606.1	RefSeq	gene	4111129	4111662	.	-	.	ID=gene4324;Dbxref=GeneID:3798204;Name=blc;Note=SDY4393;gbkey=Gene;gene=blc;gene_biotype=protein_coding;locus_tag=SDY_4393
NC_007606.1	RefSeq	CDS	4111129	4111662	.	-	0	ID=cds3827;Parent=gene4324;Dbxref=Genbank:YP_405771.1,GeneID:3798204;Name=YP_405771.1;Note=lipocalin%3B globomycin-sensitive outer membrane lipoprotein;gbkey=CDS;gene=blc;product=outer membrane lipoprotein Blc;protein_id=YP_405771.1;transl_table=11
NC_007606.1	RefSeq	gene	4111751	4112884	.	-	.	ID=gene4325;Dbxref=GeneID:3798205;Name=ampC;Note=SDY4394;gbkey=Gene;gene=ampC;gene_biotype=protein_coding;locus_tag=SDY_4394
NC_007606.1	RefSeq	CDS	4111751	4112884	.	-	0	ID=cds3828;Parent=gene4325;Dbxref=Genbank:YP_405772.1,GeneID:3798205;Name=YP_405772.1;Note=Code: V%3B COG: COG1680;gbkey=CDS;gene=ampC;product=beta-lactamase;protein_id=YP_405772.1;transl_table=11
NC_007606.1	RefSeq	gene	4112947	4113306	.	-	.	ID=gene4326;Dbxref=GeneID:3798206;Name=frdD;Note=SDY4395;gbkey=Gene;gene=frdD;gene_biotype=protein_coding;locus_tag=SDY_4395
NC_007606.1	RefSeq	CDS	4112947	4113306	.	-	0	ID=cds3829;Parent=gene4326;Dbxref=Genbank:YP_405773.1,GeneID:3798206;Name=YP_405773.1;Note=in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane;gbkey=CDS;gene=frdD;product=fumarate reductase subunit D;protein_id=YP_405773.1;transl_table=11
NC_007606.1	RefSeq	gene	4113317	4113712	.	-	.	ID=gene4327;Dbxref=GeneID:3798207;Name=frdC;Note=SDY4396;gbkey=Gene;gene=frdC;gene_biotype=protein_coding;locus_tag=SDY_4396
NC_007606.1	RefSeq	CDS	4113317	4113712	.	-	0	ID=cds3830;Parent=gene4327;Dbxref=Genbank:YP_405774.1,GeneID:3798207;Name=YP_405774.1;Note=''part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB'';gbkey=CDS;gene=frdC;product=fumarate reductase subunit C;protein_id=YP_405774.1;transl_table=11
NC_007606.1	RefSeq	gene	4113723	4114457	.	-	.	ID=gene4328;Dbxref=GeneID:3798208;Name=frdB;Note=SDY4397;gbkey=Gene;gene=frdB;gene_biotype=protein_coding;locus_tag=SDY_4397
NC_007606.1	RefSeq	CDS	4113723	4114457	.	-	0	ID=cds3831;Parent=gene4328;Dbxref=Genbank:YP_405775.1,GeneID:3798208;Name=YP_405775.1;Note=''part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB'';gbkey=CDS;gene=frdB;product=fumarate reductase iron-sulfur subunit;protein_id=YP_405775.1;transl_table=11
NC_007606.1	RefSeq	gene	4114450	4116258	.	-	.	ID=gene4329;Dbxref=GeneID:3798209;Name=frdA;Note=SDY4398;gbkey=Gene;gene=frdA;gene_biotype=protein_coding;locus_tag=SDY_4398
NC_007606.1	RefSeq	CDS	4114450	4116258	.	-	0	ID=cds3832;Parent=gene4329;Dbxref=Genbank:YP_405776.1,GeneID:3798209;Name=YP_405776.1;Note=''part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration%3B FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit%2C respectively%3B FrdCD are the membrane components which interact with quinone and are involved in electron transfer%3B the catalytic subunits are similar to succinate dehydrogenase SdhAB'';gbkey=CDS;gene=frdA;product=fumarate reductase flavoprotein subunit;protein_id=YP_405776.1;transl_table=11
NC_007606.1	RefSeq	gene	4116583	4117560	.	+	.	ID=gene4330;Dbxref=GeneID:3798210;Name=yjeA;Note=SDY4399;gbkey=Gene;gene=yjeA;gene_biotype=protein_coding;locus_tag=SDY_4399
NC_007606.1	RefSeq	CDS	4116583	4117560	.	+	0	ID=cds3833;Parent=gene4330;Dbxref=Genbank:YP_405777.2,GeneID:3798210;Name=YP_405777.2;Note=lysine--tRNA ligase beta chain%3B poxA%3B class II aminoacyl tRNA synthetase%3B catalyzes a two-step reaction%3B first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP%3B second by transfer of the aminoacyl-adenylate to its tRNA;gbkey=CDS;gene=yjeA;product=lysyl-tRNA synthetase;protein_id=YP_405777.2;transl_table=11
NC_007606.1	RefSeq	region	4117802	4118568	.	-	.	ID=id672;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4118239	4118511	.	-	.	ID=gene4331;Dbxref=GeneID:18263185;Name=SDY_4797;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4797
NC_007606.1	RefSeq	CDS	4118239	4118511	.	-	0	ID=cds3834;Parent=gene4331;Dbxref=Genbank:YP_009000871.1,GeneID:18263185;Name=YP_009000871.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000871.1;transl_table=11
NC_007606.1	RefSeq	gene	4118639	4119277	.	+	.	ID=gene4332;Dbxref=GeneID:3798213;Name=yjfM;Note=SDY4402;gbkey=Gene;gene=yjfM;gene_biotype=protein_coding;locus_tag=SDY_4402
NC_007606.1	RefSeq	CDS	4118639	4119277	.	+	0	ID=cds3835;Parent=gene4332;Dbxref=Genbank:YP_405780.1,GeneID:3798213;Name=YP_405780.1;Note=Code: S%3B COG: COG5463;gbkey=CDS;gene=yjfM;product=hypothetical protein;protein_id=YP_405780.1;transl_table=11
NC_007606.1	RefSeq	gene	4119280	4120443	.	+	.	ID=gene4333;Dbxref=GeneID:3798214;Name=yjfC;Note=SDY4403;gbkey=Gene;gene=yjfC;gene_biotype=protein_coding;locus_tag=SDY_4403
NC_007606.1	RefSeq	CDS	4119280	4120443	.	+	0	ID=cds3836;Parent=gene4333;Dbxref=Genbank:YP_405781.1,GeneID:3798214;Name=YP_405781.1;Note=Code: E%3B COG: COG0754;gbkey=CDS;gene=yjfC;product=synthetase/amidase;protein_id=YP_405781.1;transl_table=11
NC_007606.1	RefSeq	gene	4120512	4122140	.	+	.	ID=gene4334;Dbxref=GeneID:3798215;Name=aidB;Note=SDY4404;gbkey=Gene;gene=aidB;gene_biotype=protein_coding;locus_tag=SDY_4404
NC_007606.1	RefSeq	CDS	4120512	4122140	.	+	0	ID=cds3837;Parent=gene4334;Dbxref=Genbank:YP_405782.1,GeneID:3798215;Name=YP_405782.1;Note=catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA;gbkey=CDS;gene=aidB;product=isovaleryl CoA dehydrogenase;protein_id=YP_405782.1;transl_table=11
NC_007606.1	RefSeq	region	4122198	4122963	.	+	.	ID=id673;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4122255	4122527	.	+	.	ID=gene4335;Dbxref=GeneID:18263186;Name=SDY_4798;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4798
NC_007606.1	RefSeq	CDS	4122255	4122527	.	+	0	ID=cds3838;Parent=gene4335;Dbxref=Genbank:YP_009000872.1,GeneID:18263186;Name=YP_009000872.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000872.1;transl_table=11
NC_007606.1	RefSeq	gene	4122554	4122949	.	+	.	ID=gene4336;Dbxref=GeneID:3797368;Name=SDY_4406;Note=SDY4406;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4406
NC_007606.1	RefSeq	CDS	4122554	4122949	.	+	0	ID=cds3839;Parent=gene4336;Dbxref=Genbank:YP_405784.1,GeneID:3797368;Name=YP_405784.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405784.1;transl_table=11
NC_007606.1	RefSeq	region	4123003	4123770	.	+	.	ID=id674;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4123058	4123333	.	+	.	ID=gene4337;Dbxref=GeneID:3797369;Name=insA;Note=SDY4407;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4407
NC_007606.1	RefSeq	CDS	4123058	4123333	.	+	0	ID=cds3840;Parent=gene4337;Dbxref=Genbank:YP_405785.1,GeneID:3797369;Name=YP_405785.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405785.1;transl_table=11
NC_007606.1	RefSeq	gene	4123378	4123755	.	+	.	ID=gene4338;Dbxref=GeneID:3797370;Name=insB;Note=SDY4408;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4408
NC_007606.1	RefSeq	CDS	4123378	4123755	.	+	0	ID=cds3841;Parent=gene4338;Dbxref=Genbank:YP_405786.1,GeneID:3797370;Name=YP_405786.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405786.1;transl_table=11
NC_007606.1	RefSeq	gene	4123832	4124563	.	-	.	ID=gene4339;Dbxref=GeneID:3797371;Name=yjfH;Note=SDY4409;gbkey=Gene;gene=yjfH;gene_biotype=protein_coding;locus_tag=SDY_4409
NC_007606.1	RefSeq	CDS	4123832	4124563	.	-	0	ID=cds3842;Parent=gene4339;Dbxref=Genbank:YP_405787.1,GeneID:3797371;Name=YP_405787.1;Note=Specifically methylates the ribose of guanosine 2251 in 23S rRNA;gbkey=CDS;gene=yjfH;product=23S rRNA (guanosine-2'-O-)-methyltransferase;protein_id=YP_405787.1;transl_table=11
NC_007606.1	RefSeq	gene	4124744	4127173	.	-	.	ID=gene4340;Dbxref=GeneID:3797372;Name=vacB;Note=SDY4410;gbkey=Gene;gene=vacB;gene_biotype=protein_coding;locus_tag=SDY_4410
NC_007606.1	RefSeq	CDS	4124744	4127173	.	-	0	ID=cds3843;Parent=gene4340;Dbxref=Genbank:YP_405788.2,GeneID:3797372;Name=YP_405788.2;Note=''3'-5'exoribonuclease that acts nonspecifically on poly(A)%2C poly(U) and ribosomal RNAs'';gbkey=CDS;gene=vacB;product=exoribonuclease R;protein_id=YP_405788.2;transl_table=11
NC_007606.1	RefSeq	gene	4127212	4127637	.	-	.	ID=gene4341;Dbxref=GeneID:3797373;Name=yjeB;Note=SDY4411;gbkey=Gene;gene=yjeB;gene_biotype=protein_coding;locus_tag=SDY_4411
NC_007606.1	RefSeq	CDS	4127212	4127637	.	-	0	ID=cds3844;Parent=gene4341;Dbxref=Genbank:YP_405789.1,GeneID:3797373;Name=YP_405789.1;Note=negatively regulates the transcription of genes upregulated by nitrosative stress;gbkey=CDS;gene=yjeB;product=transcriptional repressor NsrR;protein_id=YP_405789.1;transl_table=11
NC_007606.1	RefSeq	gene	4127842	4129140	.	-	.	ID=gene4342;Dbxref=GeneID:3797374;Name=purA;Note=SDY4412;gbkey=Gene;gene=purA;gene_biotype=protein_coding;locus_tag=SDY_4412
NC_007606.1	RefSeq	CDS	4127842	4129140	.	-	0	ID=cds3845;Parent=gene4342;Dbxref=Genbank:YP_405790.1,GeneID:3797374;Name=YP_405790.1;Note=''catalyzes the formation of N6-(1%2C2%2C-dicarboxyethyl)-AMP from L-aspartate%2C inosine monophosphate and GTP in AMP biosynthesis'';gbkey=CDS;gene=purA;product=adenylosuccinate synthetase;protein_id=YP_405790.1;transl_table=11
NC_007606.1	RefSeq	gene	4129244	4129441	.	-	.	ID=gene4343;Dbxref=GeneID:3797375;Name=yjeT;Note=SDY4413;gbkey=Gene;gene=yjeT;gene_biotype=protein_coding;locus_tag=SDY_4413
NC_007606.1	RefSeq	CDS	4129244	4129441	.	-	0	ID=cds3846;Parent=gene4343;Dbxref=Genbank:YP_405791.1,GeneID:3797375;Name=YP_405791.1;Note=Code: S%3B COG: COG3242;gbkey=CDS;gene=yjeT;product=hypothetical protein;protein_id=YP_405791.1;transl_table=11
NC_007606.1	RefSeq	gene	4129523	4130527	.	-	.	ID=gene4344;Dbxref=GeneID:3797376;Name=hflC;Note=SDY4414;gbkey=Gene;gene=hflC;gene_biotype=protein_coding;locus_tag=SDY_4414
NC_007606.1	RefSeq	CDS	4129523	4130527	.	-	0	ID=cds3847;Parent=gene4344;Dbxref=Genbank:YP_405792.1,GeneID:3797376;Name=YP_405792.1;Note=with HflK inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;gene=hflC;product=FtsH protease regulator HflC;protein_id=YP_405792.1;transl_table=11
NC_007606.1	RefSeq	gene	4130530	4131789	.	-	.	ID=gene4345;Dbxref=GeneID:3797377;Name=hflK;Note=SDY4415;gbkey=Gene;gene=hflK;gene_biotype=protein_coding;locus_tag=SDY_4415
NC_007606.1	RefSeq	CDS	4130530	4131789	.	-	0	ID=cds3848;Parent=gene4345;Dbxref=Genbank:YP_405793.1,GeneID:3797377;Name=YP_405793.1;Note=with HflC inhibits proteolysis of lambda cII protein by FtsH;gbkey=CDS;gene=hflK;product=FtsH protease regulator HflK;protein_id=YP_405793.1;transl_table=11
NC_007606.1	RefSeq	gene	4131875	4133155	.	-	.	ID=gene4346;Dbxref=GeneID:3797378;Name=hflX;Note=SDY4416;gbkey=Gene;gene=hflX;gene_biotype=protein_coding;locus_tag=SDY_4416
NC_007606.1	RefSeq	CDS	4131875	4133155	.	-	0	ID=cds3849;Parent=gene4346;Dbxref=Genbank:YP_405794.1,GeneID:3797378;Name=YP_405794.1;Note=involved in modulation of proteins HflK and HflC%3B part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein;gbkey=CDS;gene=hflX;product=GTPase HflX;protein_id=YP_405794.1;transl_table=11
NC_007606.1	RefSeq	gene	4133231	4133539	.	-	.	ID=gene4347;Dbxref=GeneID:3797379;Name=hfq;Note=SDY4417;gbkey=Gene;gene=hfq;gene_biotype=protein_coding;locus_tag=SDY_4417
NC_007606.1	RefSeq	CDS	4133231	4133539	.	-	0	ID=cds3850;Parent=gene4347;Dbxref=Genbank:YP_405795.1,GeneID:3797379;Name=YP_405795.1;Note=Stimulates the elongation of poly(A) tails;gbkey=CDS;gene=hfq;product=RNA-binding protein Hfq;protein_id=YP_405795.1;transl_table=11
NC_007606.1	RefSeq	gene	4133625	4134575	.	-	.	ID=gene4348;Dbxref=GeneID:3797380;Name=miaA;Note=SDY4418;gbkey=Gene;gene=miaA;gene_biotype=protein_coding;locus_tag=SDY_4418
NC_007606.1	RefSeq	CDS	4133625	4134575	.	-	0	ID=cds3851;Parent=gene4348;Dbxref=Genbank:YP_405796.1,GeneID:3797380;Name=YP_405796.1;Note=IPP transferase%3B isopentenyltransferase%3B involved in tRNA modification%3B in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil%3B further tRNA modifications may occur%3B mutations in miaA result in defects in translation efficiency and fidelity;gbkey=CDS;gene=miaA;product=tRNA delta(2)-isopentenylpyrophosphate transferase;protein_id=YP_405796.1;transl_table=11
NC_007606.1	RefSeq	gene	4134568	4136415	.	-	.	ID=gene4349;Dbxref=GeneID:3797381;Name=mutL;Note=SDY4419;gbkey=Gene;gene=mutL;gene_biotype=protein_coding;locus_tag=SDY_4419
NC_007606.1	RefSeq	CDS	4134568	4136415	.	-	0	ID=cds3852;Parent=gene4349;Dbxref=Genbank:YP_405797.1,GeneID:3797381;Name=YP_405797.1;Note=This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex;gbkey=CDS;gene=mutL;product=DNA mismatch repair protein;protein_id=YP_405797.1;transl_table=11
NC_007606.1	RefSeq	gene	4136425	4137762	.	-	.	ID=gene4350;Dbxref=GeneID:3797382;Name=amiB;Note=SDY4420;gbkey=Gene;gene=amiB;gene_biotype=protein_coding;locus_tag=SDY_4420
NC_007606.1	RefSeq	CDS	4136425	4137762	.	-	0	ID=cds3853;Parent=gene4350;Dbxref=Genbank:YP_405798.1,GeneID:3797382;Name=YP_405798.1;Note=Code: M%3B COG: COG0860;gbkey=CDS;gene=amiB;product=N-acetylmuramoyl-L-alanine amidase;protein_id=YP_405798.1;transl_table=11
NC_007606.1	RefSeq	gene	4137781	4138242	.	-	.	ID=gene4351;Dbxref=GeneID:3797383;Name=yjeE;Note=SDY4421;gbkey=Gene;gene=yjeE;gene_biotype=protein_coding;locus_tag=SDY_4421
NC_007606.1	RefSeq	CDS	4137781	4138242	.	-	0	ID=cds3854;Parent=gene4351;Dbxref=Genbank:YP_405799.1,GeneID:3797383;Name=YP_405799.1;Note=possibly involved in cell wall synthesis;gbkey=CDS;gene=yjeE;product=ATPase;protein_id=YP_405799.1;transl_table=11
NC_007606.1	RefSeq	gene	4138214	4139338	.	-	.	ID=gene4352;Dbxref=GeneID:3797354;Name=yjeF;Note=''SDY4426%3B contains 2 iso-IS1 insertions%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yjeF;gene_biotype=pseudogene;locus_tag=SDY_4426;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	4139405	4140170	.	-	.	ID=id675;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4139419	4139814	.	-	.	ID=gene4353;Dbxref=GeneID:3797384;Name=SDY_4422;Note=SDY4422;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4422
NC_007606.1	RefSeq	CDS	4139419	4139814	.	-	0	ID=cds3855;Parent=gene4353;Dbxref=Genbank:YP_405800.1,GeneID:3797384;Name=YP_405800.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405800.1;transl_table=11
NC_007606.1	RefSeq	gene	4139841	4140113	.	-	.	ID=gene4354;Dbxref=GeneID:18263187;Name=SDY_4799;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4799
NC_007606.1	RefSeq	CDS	4139841	4140113	.	-	0	ID=cds3856;Parent=gene4354;Dbxref=Genbank:YP_009000873.1,GeneID:18263187;Name=YP_009000873.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000873.1;transl_table=11
NC_007606.1	RefSeq	region	4140178	4140944	.	-	.	ID=id676;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4140193	4140588	.	-	.	ID=gene4355;Dbxref=GeneID:3797386;Name=SDY_4424;Note=SDY4424;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4424
NC_007606.1	RefSeq	CDS	4140193	4140588	.	-	0	ID=cds3857;Parent=gene4355;Dbxref=Genbank:YP_405802.1,GeneID:3797386;Name=YP_405802.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405802.1;transl_table=11
NC_007606.1	RefSeq	gene	4140615	4140887	.	-	.	ID=gene4356;Dbxref=GeneID:18263188;Name=SDY_4800;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4800
NC_007606.1	RefSeq	CDS	4140615	4140887	.	-	0	ID=cds3858;Parent=gene4356;Dbxref=Genbank:YP_009000874.1,GeneID:18263188;Name=YP_009000874.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000874.1;transl_table=11
NC_007606.1	RefSeq	gene	4141308	4142447	.	+	.	ID=gene4357;Dbxref=GeneID:3797353;Name=yjeS;Note=SDY4425;gbkey=Gene;gene=yjeS;gene_biotype=protein_coding;locus_tag=SDY_4425
NC_007606.1	RefSeq	CDS	4141308	4142447	.	+	0	ID=cds3859;Parent=gene4357;Dbxref=Genbank:YP_405803.1,GeneID:3797353;Name=YP_405803.1;Note=Code: C%3B COG: COG1600;gbkey=CDS;gene=yjeS;product=hypothetical protein;protein_id=YP_405803.1;transl_table=11
NC_007606.1	RefSeq	gene	4142716	4142791	.	-	.	ID=gene4358;Dbxref=GeneID:3797355;Name=SDY_4427;Note=SDY4427;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_4427
NC_007606.1	RefSeq	tRNA	4142716	4142791	.	-	.	ID=rna97;Parent=gene4358;Dbxref=GeneID:3797355;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	exon	4142716	4142791	.	-	.	ID=id677;Parent=rna97;Dbxref=GeneID:3797355;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	gene	4142827	4142902	.	-	.	ID=gene4359;Dbxref=GeneID:3797356;Name=SDY_4428;Note=SDY4428;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_4428
NC_007606.1	RefSeq	tRNA	4142827	4142902	.	-	.	ID=rna98;Parent=gene4359;Dbxref=GeneID:3797356;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	exon	4142827	4142902	.	-	.	ID=id678;Parent=rna98;Dbxref=GeneID:3797356;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	gene	4142939	4143014	.	-	.	ID=gene4360;Dbxref=GeneID:3797357;Name=SDY_4429;Note=SDY4429;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_4429
NC_007606.1	RefSeq	tRNA	4142939	4143014	.	-	.	ID=rna99;Parent=gene4360;Dbxref=GeneID:3797357;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	exon	4142939	4143014	.	-	.	ID=id679;Parent=rna99;Dbxref=GeneID:3797357;codons=61;gbkey=tRNA;product=tRNA-Gly
NC_007606.1	RefSeq	gene	4143225	4143770	.	-	.	ID=gene4361;Dbxref=GeneID:3797358;Name=yjeR;Note=SDY4430;gbkey=Gene;gene=yjeR;gene_biotype=protein_coding;locus_tag=SDY_4430
NC_007606.1	RefSeq	CDS	4143225	4143770	.	-	0	ID=cds3860;Parent=gene4361;Dbxref=Genbank:YP_405804.2,GeneID:3797358;Name=YP_405804.2;Note=3'-5' exoribonuclease specific for small oligoribonuclotides;gbkey=CDS;gene=yjeR;product=oligoribonuclease;protein_id=YP_405804.2;transl_table=11
NC_007606.1	RefSeq	gene	4143865	4144917	.	+	.	ID=gene4362;Dbxref=GeneID:3797359;Name=yjeQ;Note=SDY4431;gbkey=Gene;gene=yjeQ;gene_biotype=protein_coding;locus_tag=SDY_4431
NC_007606.1	RefSeq	CDS	4143865	4144917	.	+	0	ID=cds3861;Parent=gene4362;Dbxref=Genbank:YP_405805.2,GeneID:3797359;Name=YP_405805.2;Note=EngC%3B RsgA%3B CpgA%3B circularly permuted GTPase%3B ribosome small subunit-dependent GTPase A%3B has the pattern G4-G1-G3 as opposed to other GTPases%3B interacts strongly with 30S ribosome which stimulates GTPase activity;gbkey=CDS;gene=yjeQ;product=ribosome-associated GTPase;protein_id=YP_405805.2;transl_table=11
NC_007606.1	RefSeq	gene	4145014	4145982	.	+	.	ID=gene4363;Dbxref=GeneID:3797360;Name=psd;Note=SDY4432;gbkey=Gene;gene=psd;gene_biotype=protein_coding;locus_tag=SDY_4432
NC_007606.1	RefSeq	CDS	4145014	4145982	.	+	0	ID=cds3862;Parent=gene4363;Dbxref=Genbank:YP_405806.1,GeneID:3797360;Name=YP_405806.1;Note=catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine;gbkey=CDS;gene=psd;product=phosphatidylserine decarboxylase;protein_id=YP_405806.1;transl_table=11
NC_007606.1	RefSeq	gene	4146004	4149327	.	+	.	ID=gene4364;Dbxref=GeneID:3797361;Name=yjeP;Note=SDY4433;gbkey=Gene;gene=yjeP;gene_biotype=protein_coding;locus_tag=SDY_4433
NC_007606.1	RefSeq	CDS	4146004	4149327	.	+	0	ID=cds3863;Parent=gene4364;Dbxref=Genbank:YP_405807.1,GeneID:3797361;Name=YP_405807.1;Note=Code: M%3B COG: COG3264;gbkey=CDS;gene=yjeP;product=hypothetical protein;protein_id=YP_405807.1;transl_table=11
NC_007606.1	RefSeq	gene	4149478	4150959	.	-	.	ID=gene4365;Dbxref=GeneID:3797362;Name=yjeM;Note=SDY4434;gbkey=Gene;gene=yjeM;gene_biotype=protein_coding;locus_tag=SDY_4434
NC_007606.1	RefSeq	CDS	4149478	4150959	.	-	0	ID=cds3864;Parent=gene4365;Dbxref=Genbank:YP_405808.1,GeneID:3797362;Name=YP_405808.1;Note=Code: E%3B COG: COG0531;gbkey=CDS;gene=yjeM;product=transporter;protein_id=YP_405808.1;transl_table=11
NC_007606.1	RefSeq	region	4150966	4151731	.	-	.	ID=id680;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4150980	4151375	.	-	.	ID=gene4366;Dbxref=GeneID:3797363;Name=SDY_4435;Note=SDY4435;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4435
NC_007606.1	RefSeq	CDS	4150980	4151375	.	-	0	ID=cds3865;Parent=gene4366;Dbxref=Genbank:YP_405809.1,GeneID:3797363;Name=YP_405809.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405809.1;transl_table=11
NC_007606.1	RefSeq	gene	4151402	4151674	.	-	.	ID=gene4367;Dbxref=GeneID:18263189;Name=SDY_4801;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4801
NC_007606.1	RefSeq	CDS	4151402	4151674	.	-	0	ID=cds3866;Parent=gene4367;Dbxref=Genbank:YP_009000875.1,GeneID:18263189;Name=YP_009000875.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000875.1;transl_table=11
NC_007606.1	RefSeq	region	4151903	4152670	.	-	.	ID=id681;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4151918	4152295	.	-	.	ID=gene4368;Dbxref=GeneID:3797365;Name=insB;Note=SDY4437;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4437
NC_007606.1	RefSeq	CDS	4151918	4152295	.	-	0	ID=cds3867;Parent=gene4368;Dbxref=Genbank:YP_405811.1,GeneID:3797365;Name=YP_405811.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405811.1;transl_table=11
NC_007606.1	RefSeq	gene	4152340	4152615	.	-	.	ID=gene4369;Dbxref=GeneID:3797366;Name=insA;Note=SDY4438;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4438
NC_007606.1	RefSeq	CDS	4152340	4152615	.	-	0	ID=cds3868;Parent=gene4369;Dbxref=Genbank:YP_405812.1,GeneID:3797366;Name=YP_405812.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405812.1;transl_table=11
NC_007606.1	RefSeq	gene	4153366	4153441	.	-	.	ID=gene4370;Dbxref=GeneID:3797367;Name=SDY_4439;Note=SDY4439;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_4439
NC_007606.1	RefSeq	tRNA	4153366	4153441	.	-	.	ID=rna100;Parent=gene4370;Dbxref=GeneID:3797367;codons=1;gbkey=tRNA;product=tRNA-Phe
NC_007606.1	RefSeq	exon	4153366	4153441	.	-	.	ID=id682;Parent=rna100;Dbxref=GeneID:3797367;codons=1;gbkey=tRNA;product=tRNA-Phe
NC_007606.1	RefSeq	gene	4153548	4154123	.	-	.	ID=gene4371;Dbxref=GeneID:3798331;Name=SDY_4440;Note=SDY4440;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4440;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	4154160	4155857	.	-	.	ID=gene4372;Dbxref=GeneID:3798332;Name=dipZ;Note=SDY4441;gbkey=Gene;gene=dipZ;gene_biotype=protein_coding;locus_tag=SDY_4441
NC_007606.1	RefSeq	CDS	4154160	4155857	.	-	0	ID=cds3869;Parent=gene4372;Dbxref=Genbank:YP_405814.1,GeneID:3798332;Name=YP_405814.1;Note=two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm%3B DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm;gbkey=CDS;gene=dipZ;product=thiol:disulfide interchange protein;protein_id=YP_405814.1;transl_table=11
NC_007606.1	RefSeq	gene	4155833	4156171	.	-	.	ID=gene4373;Dbxref=GeneID:3798333;Name=cutA;Note=SDY4442;gbkey=Gene;gene=cutA;gene_biotype=protein_coding;locus_tag=SDY_4442
NC_007606.1	RefSeq	CDS	4155833	4156171	.	-	0	ID=cds3870;Parent=gene4373;Dbxref=Genbank:YP_405815.1,GeneID:3798333;Name=YP_405815.1;Note=copper binding protein required for copper tolerance%3B involved in resistance toward heavy metals;gbkey=CDS;gene=cutA;product=divalent-cation tolerance protein CutA;protein_id=YP_405815.1;transl_table=11
NC_007606.1	RefSeq	gene	4156287	4157588	.	-	.	ID=gene4374;Dbxref=GeneID:3798334;Name=dcuA;Note=SDY4443;gbkey=Gene;gene=dcuA;gene_biotype=protein_coding;locus_tag=SDY_4443
NC_007606.1	RefSeq	CDS	4156287	4157588	.	-	0	ID=cds3871;Parent=gene4374;Dbxref=Genbank:YP_405816.1,GeneID:3798334;Name=YP_405816.1;Note=functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate%3B similar to dcuB;gbkey=CDS;gene=dcuA;product=anaerobic C4-dicarboxylate transporter;protein_id=YP_405816.1;transl_table=11
NC_007606.1	RefSeq	gene	4157706	4159187	.	-	.	ID=gene4375;Dbxref=GeneID:3798335;Name=aspA;Note=SDY4444;gbkey=Gene;gene=aspA;gene_biotype=protein_coding;locus_tag=SDY_4444
NC_007606.1	RefSeq	CDS	4157706	4159187	.	-	0	ID=cds3872;Parent=gene4375;Dbxref=Genbank:YP_405817.1,GeneID:3798335;Name=YP_405817.1;Note=catalyzes the formation of fumarate from aspartate;gbkey=CDS;gene=aspA;product=aspartate ammonia-lyase;protein_id=YP_405817.1;transl_table=11
NC_007606.1	RefSeq	gene	4159478	4159954	.	+	.	ID=gene4376;Dbxref=GeneID:3798336;Name=fxsA;Note=SDY4445;gbkey=Gene;gene=fxsA;gene_biotype=protein_coding;locus_tag=SDY_4445
NC_007606.1	RefSeq	CDS	4159478	4159954	.	+	0	ID=cds3873;Parent=gene4376;Dbxref=Genbank:YP_405818.1,GeneID:3798336;Name=YP_405818.1;Note=F exclusion of bacteriophage T7%3B overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7%3B interacts with the F plasmid-encoded PifA protein%3B inner membrane protein;gbkey=CDS;gene=fxsA;product=FxsA protein;protein_id=YP_405818.1;transl_table=11
NC_007606.1	RefSeq	region	4160009	4160774	.	-	.	ID=id683;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4160023	4160418	.	-	.	ID=gene4377;Dbxref=GeneID:3798337;Name=SDY_4446;Note=SDY4446;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4446
NC_007606.1	RefSeq	CDS	4160023	4160418	.	-	0	ID=cds3874;Parent=gene4377;Dbxref=Genbank:YP_405819.1,GeneID:3798337;Name=YP_405819.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405819.1;transl_table=11
NC_007606.1	RefSeq	gene	4160445	4160717	.	-	.	ID=gene4378;Dbxref=GeneID:18263190;Name=SDY_4802;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4802
NC_007606.1	RefSeq	CDS	4160445	4160717	.	-	0	ID=cds3875;Parent=gene4378;Dbxref=Genbank:YP_009000876.1,GeneID:18263190;Name=YP_009000876.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000876.1;transl_table=11
NC_007606.1	RefSeq	gene	4160753	4162000	.	-	.	ID=gene4379;Dbxref=GeneID:3798338;Name=yjeH;Note=SDY4447;gbkey=Gene;gene=yjeH;gene_biotype=protein_coding;locus_tag=SDY_4447
NC_007606.1	RefSeq	CDS	4160753	4162000	.	-	0	ID=cds3876;Parent=gene4379;Dbxref=Genbank:YP_405820.1,GeneID:3798338;Name=YP_405820.1;Note=uncharacterized member of the APC superfamily of amino acid transporters%3B unknown function;gbkey=CDS;gene=yjeH;product=hypothetical protein;protein_id=YP_405820.1;transl_table=11
NC_007606.1	RefSeq	gene	4162276	4162569	.	+	.	ID=gene4380;Dbxref=GeneID:3798339;Name=groES;Note=SDY4448;gbkey=Gene;gene=groES;gene_biotype=protein_coding;locus_tag=SDY_4448
NC_007606.1	RefSeq	CDS	4162276	4162569	.	+	0	ID=cds3877;Parent=gene4380;Dbxref=Genbank:YP_405821.1,GeneID:3798339;Name=YP_405821.1;Note=10 kDa chaperonin%3B Cpn10%3B GroES%3B forms homoheptameric ring%3B binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it%3B folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES%3B release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring;gbkey=CDS;gene=groES;product=co-chaperonin GroES;protein_id=YP_405821.1;transl_table=11
NC_007606.1	RefSeq	gene	4162613	4164259	.	+	.	ID=gene4381;Dbxref=GeneID:3798340;Name=groEL;Note=SDY4449;gbkey=Gene;gene=groEL;gene_biotype=protein_coding;locus_tag=SDY_4449
NC_007606.1	RefSeq	CDS	4162613	4164259	.	+	0	ID=cds3878;Parent=gene4381;Dbxref=Genbank:YP_405822.1,GeneID:3798340;Name=YP_405822.1;Note=''60 kDa chaperone family%3B promotes refolding of misfolded polypeptides especially under stressful conditions%3B forms two stacked rings of heptamers to form a barrel-shaped 14mer%3B ends can be capped by GroES%3B misfolded proteins enter the barrel where they are refolded when GroES binds%3B many bacteria have multiple copies of the groEL gene which are active under different environmental conditions%3B the B.japonicum protein in this cluster is expressed constitutively%3B in Rhodobacter%2C Corynebacterium and Rhizobium this protein is essential for growth'';gbkey=CDS;gene=groEL;product=molecular chaperone GroEL;protein_id=YP_405822.1;transl_table=11
NC_007606.1	RefSeq	gene	4164364	4164750	.	+	.	ID=gene4382;Dbxref=GeneID:3798341;Name=yjeI;Note=SDY4450;gbkey=Gene;gene=yjeI;gene_biotype=protein_coding;locus_tag=SDY_4450
NC_007606.1	RefSeq	CDS	4164364	4164750	.	+	0	ID=cds3879;Parent=gene4382;Dbxref=Genbank:YP_405823.1,GeneID:3798341;Name=YP_405823.1;gbkey=CDS;gene=yjeI;product=hypothetical protein;protein_id=YP_405823.1;transl_table=11
NC_007606.1	RefSeq	gene	4164800	4165099	.	-	.	ID=gene4383;Dbxref=GeneID:3798342;Name=yjeJ;Note=''SDY4451%3B truncated%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yjeJ;gene_biotype=pseudogene;locus_tag=SDY_4451;pseudo=true
NC_007606.1	RefSeq	region	4165117	4165882	.	+	.	ID=id684;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4165174	4165446	.	+	.	ID=gene4384;Dbxref=GeneID:18263191;Name=SDY_4803;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4803
NC_007606.1	RefSeq	CDS	4165174	4165446	.	+	0	ID=cds3880;Parent=gene4384;Dbxref=Genbank:YP_009000877.1,GeneID:18263191;Name=YP_009000877.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000877.1;transl_table=11
NC_007606.1	RefSeq	gene	4165473	4165868	.	+	.	ID=gene4385;Dbxref=GeneID:3798343;Name=SDY_4452;Note=SDY4452;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4452
NC_007606.1	RefSeq	CDS	4165473	4165868	.	+	0	ID=cds3881;Parent=gene4385;Dbxref=Genbank:YP_405824.1,GeneID:3798343;Name=YP_405824.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405824.1;transl_table=11
NC_007606.1	RefSeq	gene	4166304	4166858	.	-	.	ID=gene4386;Dbxref=GeneID:3798344;Name=ytfJ;Note=SDY4453;gbkey=Gene;gene=ytfJ;gene_biotype=protein_coding;locus_tag=SDY_4453
NC_007606.1	RefSeq	CDS	4166304	4166858	.	-	0	ID=cds3882;Parent=gene4386;Dbxref=Genbank:YP_405825.1,GeneID:3798344;Name=YP_405825.1;Note=Code: R%3B COG: COG3054;gbkey=CDS;gene=ytfJ;product=hypothetical protein;protein_id=YP_405825.1;transl_table=11
NC_007606.1	RefSeq	gene	4167144	4167389	.	+	.	ID=gene4387;Dbxref=GeneID:3798345;Name=ytfK;Note=SDY4454;gbkey=Gene;gene=ytfK;gene_biotype=protein_coding;locus_tag=SDY_4454
NC_007606.1	RefSeq	CDS	4167144	4167389	.	+	0	ID=cds3883;Parent=gene4387;Dbxref=Genbank:YP_405826.1,GeneID:3798345;Name=YP_405826.1;gbkey=CDS;gene=ytfK;product=hypothetical protein;protein_id=YP_405826.1;transl_table=11
NC_007606.1	RefSeq	gene	4167468	4168811	.	-	.	ID=gene4388;Dbxref=GeneID:3798346;Name=ytfL;Note=SDY4455;gbkey=Gene;gene=ytfL;gene_biotype=protein_coding;locus_tag=SDY_4455
NC_007606.1	RefSeq	CDS	4167468	4168811	.	-	0	ID=cds3884;Parent=gene4388;Dbxref=Genbank:YP_405827.1,GeneID:3798346;Name=YP_405827.1;Note=Code: R%3B COG: COG1253;gbkey=CDS;gene=ytfL;product=transport protein;protein_id=YP_405827.1;transl_table=11
NC_007606.1	RefSeq	gene	4169134	4169772	.	-	.	ID=gene4389;Dbxref=GeneID:3798347;Name=msrA;Note=SDY4456;gbkey=Gene;gene=msrA;gene_biotype=protein_coding;locus_tag=SDY_4456
NC_007606.1	RefSeq	CDS	4169134	4169772	.	-	0	ID=cds3885;Parent=gene4389;Dbxref=Genbank:YP_405828.1,GeneID:3798347;Name=YP_405828.1;Note=this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form%3B provides protection against oxidative stress;gbkey=CDS;gene=msrA;product=methionine sulfoxide reductase A;protein_id=YP_405828.1;transl_table=11
NC_007606.1	RefSeq	gene	4169978	4171711	.	+	.	ID=gene4390;Dbxref=GeneID:3798348;Name=ytfM;Note=SDY4457;gbkey=Gene;gene=ytfM;gene_biotype=protein_coding;locus_tag=SDY_4457
NC_007606.1	RefSeq	CDS	4169978	4171711	.	+	0	ID=cds3886;Parent=gene4390;Dbxref=Genbank:YP_405829.1,GeneID:3798348;Name=YP_405829.1;Note=Code: M%3B COG: COG0729;gbkey=CDS;gene=ytfM;product=hypothetical protein;protein_id=YP_405829.1;transl_table=11
NC_007606.1	RefSeq	gene	4171708	4175487	.	+	.	ID=gene4391;Dbxref=GeneID:3797519;Name=ytfN;Note=SDY4458;gbkey=Gene;gene=ytfN;gene_biotype=protein_coding;locus_tag=SDY_4458
NC_007606.1	RefSeq	CDS	4171708	4175487	.	+	0	ID=cds3887;Parent=gene4391;Dbxref=Genbank:YP_405830.1,GeneID:3797519;Name=YP_405830.1;Note=Code: S%3B COG: COG2911;gbkey=CDS;gene=ytfN;product=hypothetical protein;protein_id=YP_405830.1;transl_table=11
NC_007606.1	RefSeq	gene	4175490	4175831	.	+	.	ID=gene4392;Dbxref=GeneID:3797520;Name=ytfP;Note=SDY4459;gbkey=Gene;gene=ytfP;gene_biotype=protein_coding;locus_tag=SDY_4459
NC_007606.1	RefSeq	CDS	4175490	4175831	.	+	0	ID=cds3888;Parent=gene4392;Dbxref=Genbank:YP_405831.1,GeneID:3797520;Name=YP_405831.1;Note=Code: S%3B COG: COG2105;gbkey=CDS;gene=ytfP;product=hypothetical protein;protein_id=YP_405831.1;transl_table=11
NC_007606.1	RefSeq	gene	4176037	4176294	.	+	.	ID=gene4393;Dbxref=GeneID:3797521;Name=chpS;Note=SDY4460;gbkey=Gene;gene=chpS;gene_biotype=protein_coding;locus_tag=SDY_4460
NC_007606.1	RefSeq	CDS	4176037	4176294	.	+	0	ID=cds3889;Parent=gene4393;Dbxref=Genbank:YP_405832.1,GeneID:3797521;Name=YP_405832.1;Note=part of the toxin-antitoxin ChpB-ChpS system;gbkey=CDS;gene=chpS;product=antitoxin ChpS;protein_id=YP_405832.1;transl_table=11
NC_007606.1	RefSeq	gene	4176288	4176638	.	+	.	ID=gene4394;Dbxref=GeneID:3797522;Name=chpB;Note=SDY4461;gbkey=Gene;gene=chpB;gene_biotype=protein_coding;locus_tag=SDY_4461
NC_007606.1	RefSeq	CDS	4176288	4176638	.	+	0	ID=cds3890;Parent=gene4394;Dbxref=Genbank:YP_405833.1,GeneID:3797522;Name=YP_405833.1;Note=toxin of the ChpB-ChpS toxin-antitoxin system;gbkey=CDS;gene=chpB;product=toxin ChpB;protein_id=YP_405833.1;transl_table=11
NC_007606.1	RefSeq	gene	4176715	4177245	.	-	.	ID=gene4395;Dbxref=GeneID:3797523;Name=ppa;Note=SDY4462;gbkey=Gene;gene=ppa;gene_biotype=protein_coding;locus_tag=SDY_4462
NC_007606.1	RefSeq	CDS	4176715	4177245	.	-	0	ID=cds3891;Parent=gene4395;Dbxref=Genbank:YP_405834.1,GeneID:3797523;Name=YP_405834.1;Note=catalyzes the hydrolysis of pyrophosphate to phosphate;gbkey=CDS;gene=ppa;product=inorganic pyrophosphatase;protein_id=YP_405834.1;transl_table=11
NC_007606.1	RefSeq	gene	4177555	4178058	.	+	.	ID=gene4396;Dbxref=GeneID:3797524;Name=ytfQ;Note=SDY4463%3B truncated%3B original product:  LACI-type transcriptional regulator;gbkey=Gene;gene=ytfQ;gene_biotype=pseudogene;locus_tag=SDY_4463;pseudo=true
NC_007606.1	RefSeq	region	4178055	4178821	.	-	.	ID=id685;gbkey=mobile_element;gene=ytfQ
NC_007606.1	RefSeq	gene	4178069	4178464	.	-	.	ID=gene4397;Dbxref=GeneID:3797525;Name=SDY_4464;Note=SDY4464;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4464
NC_007606.1	RefSeq	CDS	4178069	4178464	.	-	0	ID=cds3892;Parent=gene4397;Dbxref=Genbank:YP_405835.1,GeneID:3797525;Name=YP_405835.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405835.1;transl_table=11
NC_007606.1	RefSeq	gene	4178491	4178763	.	-	.	ID=gene4398;Dbxref=GeneID:18263192;Name=SDY_4804;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4804
NC_007606.1	RefSeq	CDS	4178491	4178763	.	-	0	ID=cds3893;Parent=gene4398;Dbxref=Genbank:YP_009000878.1,GeneID:18263192;Name=YP_009000878.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000878.1;transl_table=11
NC_007606.1	RefSeq	gene	4178981	4179907	.	+	.	ID=gene4399;Dbxref=GeneID:3797526;Name=cadB;Note=SDY4465%3B truncated%3B original product: transport of lysine/cadaverine;gbkey=Gene;gene=cadB;gene_biotype=pseudogene;locus_tag=SDY_4465;pseudo=true
NC_007606.1	RefSeq	gene	4179987	4182129	.	+	.	ID=gene4400;Dbxref=GeneID:3797527;Name=cadA;Note=SDY4466%3B frameshift%3B original product: lysine decarboxylase 1;gbkey=Gene;gene=cadA;gene_biotype=pseudogene;locus_tag=SDY_4466;pseudo=true
NC_007606.1	RefSeq	gene	4182188	4183645	.	+	.	ID=gene4401;Dbxref=GeneID:3797528;Name=yjdL;Note=SDY4467;gbkey=Gene;gene=yjdL;gene_biotype=protein_coding;locus_tag=SDY_4467
NC_007606.1	RefSeq	CDS	4182188	4183645	.	+	0	ID=cds3894;Parent=gene4401;Dbxref=Genbank:YP_405836.1,GeneID:3797528;Name=YP_405836.1;Note=Code: E%3B COG: COG3104;gbkey=CDS;gene=yjdL;product=peptide transporter;protein_id=YP_405836.1;transl_table=11
NC_007606.1	RefSeq	gene	4183882	4184058	.	+	.	ID=gene4402;Dbxref=GeneID:3797529;Name=lysU;Note=''SDY4468%3B truncated%3B original product: lysine tRNA synthetase%2C inducible%3B heat shock protein'';gbkey=Gene;gene=lysU;gene_biotype=pseudogene;locus_tag=SDY_4468;pseudo=true
NC_007606.1	RefSeq	region	4184055	4185318	.	-	.	ID=id686;gbkey=mobile_element;gene=lysU
NC_007606.1	RefSeq	gene	4184098	4184811	.	-	.	ID=gene4403;Dbxref=GeneID:3797530;Name=SDY_4469;Note=SDY4469;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4469
NC_007606.1	RefSeq	CDS	4184098	4184811	.	-	0	ID=cds3895;Parent=gene4403;Dbxref=Genbank:YP_405837.1,GeneID:3797530;Name=YP_405837.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_405837.1;transl_table=11
NC_007606.1	RefSeq	gene	4185270	4186106	.	+	.	ID=gene4404;Dbxref=GeneID:3797531;Name=SDY_4470;Note=SDY4470;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4470
NC_007606.1	RefSeq	CDS	4185270	4186106	.	+	0	ID=cds3896;Parent=gene4404;Dbxref=Genbank:YP_405838.1,GeneID:3797531;Name=YP_405838.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS911 integrase core domain-containing protein;protein_id=YP_405838.1;transl_table=11
NC_007606.1	RefSeq	region	4185319	4186111	.	+	.	ID=id687;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4186256	4186326	.	+	.	ID=gene4405;Dbxref=GeneID:3797532;Name=SDY_4471;Note=SDY4471;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_4471;pseudo=true
NC_007606.1	RefSeq	tRNA	4186256	4186326	.	+	.	ID=rna101;Parent=gene4405;Dbxref=GeneID:3797532;codons=3;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	exon	4186256	4186326	.	+	.	ID=id688;Parent=rna101;Dbxref=GeneID:3797532;codons=3;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	gene	4187169	4187550	.	+	.	ID=gene4406;Dbxref=GeneID:3797533;Name=SDY_4472;Note=SDY4472;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4472;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	4187967	4188732	.	+	.	ID=id689;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4188024	4188296	.	+	.	ID=gene4407;Dbxref=GeneID:18263193;Name=SDY_4805;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4805
NC_007606.1	RefSeq	CDS	4188024	4188296	.	+	0	ID=cds3897;Parent=gene4407;Dbxref=Genbank:YP_009000879.1,GeneID:18263193;Name=YP_009000879.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000879.1;transl_table=11
NC_007606.1	RefSeq	gene	4188323	4188718	.	+	.	ID=gene4408;Dbxref=GeneID:3797534;Name=SDY_4473;Note=SDY4473;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4473
NC_007606.1	RefSeq	CDS	4188323	4188718	.	+	0	ID=cds3898;Parent=gene4408;Dbxref=Genbank:YP_405840.1,GeneID:3797534;Name=YP_405840.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405840.1;transl_table=11
NC_007606.1	RefSeq	gene	4188742	4189452	.	+	.	ID=gene4409;Dbxref=GeneID:3797535;Name=SDY_4474;Note=SDY4474;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4474
NC_007606.1	RefSeq	CDS	4188742	4189452	.	+	0	ID=cds3899;Parent=gene4409;Dbxref=Genbank:YP_405841.1,GeneID:3797535;Name=YP_405841.1;Note=Code: L%3B COG: COG3328;gbkey=CDS;product=transposase;protein_id=YP_405841.1;transl_table=11
NC_007606.1	RefSeq	region	4189629	4189799	.	+	.	ID=id690;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	4190163	4190928	.	+	.	ID=id691;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4190220	4190492	.	+	.	ID=gene4410;Dbxref=GeneID:18263194;Name=SDY_4806;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4806
NC_007606.1	RefSeq	CDS	4190220	4190492	.	+	0	ID=cds3900;Parent=gene4410;Dbxref=Genbank:YP_009000880.1,GeneID:18263194;Name=YP_009000880.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000880.1;transl_table=11
NC_007606.1	RefSeq	gene	4190519	4190914	.	+	.	ID=gene4411;Dbxref=GeneID:3797537;Name=SDY_4476;Note=SDY4476;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4476
NC_007606.1	RefSeq	CDS	4190519	4190914	.	+	0	ID=cds3901;Parent=gene4411;Dbxref=Genbank:YP_405843.1,GeneID:3797537;Name=YP_405843.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405843.1;transl_table=11
NC_007606.1	RefSeq	region	4190984	4191126	.	+	.	ID=id692;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	region	4191120	4191247	.	-	.	ID=id693;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4191566	4192180	.	+	.	ID=gene4412;Dbxref=GeneID:3798599;Name=evgA;Note=SDY4477;gbkey=Gene;gene=evgA;gene_biotype=protein_coding;locus_tag=SDY_4477
NC_007606.1	RefSeq	CDS	4191566	4192180	.	+	0	ID=cds3902;Parent=gene4412;Dbxref=Genbank:YP_405844.1,GeneID:3798599;Name=YP_405844.1;Note=''response regulator in two-component regulatory system with EvgS%3B phosphorylated EvgA activates ompC%2C emrKY%2C gadABC%2C hdeAB and others genes%3B involved in acid resistance%2C osmotic adaption%2C and drug resistance'';gbkey=CDS;gene=evgA;product=DNA-binding transcriptional activator EvgA;protein_id=YP_405844.1;transl_table=11
NC_007606.1	RefSeq	gene	4192185	4195778	.	+	.	ID=gene4413;Dbxref=GeneID:3798600;Name=evgS;Note=SDY4478;gbkey=Gene;gene=evgS;gene_biotype=protein_coding;locus_tag=SDY_4478
NC_007606.1	RefSeq	CDS	4192185	4195778	.	+	0	ID=cds3903;Parent=gene4413;Dbxref=Genbank:YP_405845.1,GeneID:3798600;Name=YP_405845.1;Note=Code: ET%3B COG: COG0834;gbkey=CDS;gene=evgS;product=hybrid sensory histidine kinase in two-component regulatory system with EvgA;protein_id=YP_405845.1;transl_table=11
NC_007606.1	RefSeq	region	4195901	4198167	.	-	.	ID=id694;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4195938	4197476	.	-	.	ID=gene4414;Dbxref=GeneID:3798601;Name=SDY_4479;Note=SDY4479;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4479
NC_007606.1	RefSeq	CDS	4195938	4197476	.	-	0	ID=cds3904;Parent=gene4414;Dbxref=Genbank:YP_405846.1,GeneID:3798601;Name=YP_405846.1;Note=Code: L%3B COG: COG3436;gbkey=CDS;product=insertion sequence element ISSfl4 transposase;protein_id=YP_405846.1;transl_table=11
NC_007606.1	RefSeq	gene	4197526	4197873	.	-	.	ID=gene4415;Dbxref=GeneID:3798602;Name=SDY_4480;Note=SDY4480;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4480
NC_007606.1	RefSeq	CDS	4197526	4197873	.	-	0	ID=cds3905;Parent=gene4415;Dbxref=Genbank:YP_405847.1,GeneID:3798602;Name=YP_405847.1;Note=Code: L%3B COG: COG3436;gbkey=CDS;product=insertion sequence element ISSfl4 ORF2;protein_id=YP_405847.1;transl_table=11
NC_007606.1	RefSeq	region	4198167	4199305	.	-	.	ID=id695;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4198920	4199255	.	+	.	ID=gene4416;Dbxref=GeneID:3798603;Name=SDY_4481;Note=SDY4481;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4481
NC_007606.1	RefSeq	CDS	4198920	4199255	.	+	0	ID=cds3906;Parent=gene4416;Dbxref=Genbank:YP_405848.1,GeneID:3798603;Name=YP_405848.1;Note=Code: L%3B COG: COG3436;gbkey=CDS;product=insertion sequence element ISSfl4 ORF2;protein_id=YP_405848.1;transl_table=11
NC_007606.1	RefSeq	gene	4199275	4199685	.	+	.	ID=gene4417;Dbxref=GeneID:3798604;Name=SDY_4482;Note=SDY4482;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4482
NC_007606.1	RefSeq	CDS	4199275	4199685	.	+	0	ID=cds3907;Parent=gene4417;Dbxref=Genbank:YP_405849.1,GeneID:3798604;Name=YP_405849.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405849.1;transl_table=11
NC_007606.1	RefSeq	region	4199762	4200529	.	+	.	ID=id696;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4199817	4200092	.	+	.	ID=gene4418;Dbxref=GeneID:3798605;Name=insA;Note=SDY4483;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4483
NC_007606.1	RefSeq	CDS	4199817	4200092	.	+	0	ID=cds3908;Parent=gene4418;Dbxref=Genbank:YP_405850.1,GeneID:3798605;Name=YP_405850.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405850.1;transl_table=11
NC_007606.1	RefSeq	gene	4200137	4200514	.	+	.	ID=gene4419;Dbxref=GeneID:3798606;Name=insB;Note=SDY4484;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4484
NC_007606.1	RefSeq	CDS	4200137	4200514	.	+	0	ID=cds3909;Parent=gene4419;Dbxref=Genbank:YP_405851.1,GeneID:3798606;Name=YP_405851.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405851.1;transl_table=11
NC_007606.1	RefSeq	region	4200530	4201465	.	+	.	ID=id697;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4200709	4201422	.	+	.	ID=gene4420;Dbxref=GeneID:3798607;Name=SDY_4485;Note=SDY4485;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4485
NC_007606.1	RefSeq	CDS	4200709	4201422	.	+	0	ID=cds3910;Parent=gene4420;Dbxref=Genbank:YP_405852.1,GeneID:3798607;Name=YP_405852.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_405852.1;transl_table=11
NC_007606.1	RefSeq	gene	4201419	4201622	.	-	.	ID=gene4421;Dbxref=GeneID:3798608;Name=SDY_4486;Note=SDY4486;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4486
NC_007606.1	RefSeq	CDS	4201419	4201622	.	-	0	ID=cds3911;Parent=gene4421;Dbxref=Genbank:YP_405853.1,GeneID:3798608;Name=YP_405853.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405853.1;transl_table=11
NC_007606.1	RefSeq	region	4202117	4202882	.	+	.	ID=id698;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4202174	4202446	.	+	.	ID=gene4422;Dbxref=GeneID:18263195;Name=SDY_4807;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4807
NC_007606.1	RefSeq	CDS	4202174	4202446	.	+	0	ID=cds3912;Parent=gene4422;Dbxref=Genbank:YP_009000881.1,GeneID:18263195;Name=YP_009000881.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000881.1;transl_table=11
NC_007606.1	RefSeq	gene	4202473	4202868	.	+	.	ID=gene4423;Dbxref=GeneID:3798609;Name=SDY_4487;Note=SDY4487;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4487
NC_007606.1	RefSeq	CDS	4202473	4202868	.	+	0	ID=cds3913;Parent=gene4423;Dbxref=Genbank:YP_405854.1,GeneID:3798609;Name=YP_405854.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405854.1;transl_table=11
NC_007606.1	RefSeq	gene	4202980	4203927	.	-	.	ID=gene4424;Dbxref=GeneID:3798610;Name=SDY_4488;Note=SDY4488;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4488
NC_007606.1	RefSeq	CDS	4202980	4203927	.	-	0	ID=cds3914;Parent=gene4424;Dbxref=Genbank:YP_405855.1,GeneID:3798610;Name=YP_405855.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405855.1;transl_table=11
NC_007606.1	RefSeq	region	4204160	4204925	.	-	.	ID=id699;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4204174	4204569	.	-	.	ID=gene4425;Dbxref=GeneID:3798611;Name=SDY_4489;Note=SDY4489;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4489
NC_007606.1	RefSeq	CDS	4204174	4204569	.	-	0	ID=cds3915;Parent=gene4425;Dbxref=Genbank:YP_405856.1,GeneID:3798611;Name=YP_405856.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405856.1;transl_table=11
NC_007606.1	RefSeq	gene	4204596	4204868	.	-	.	ID=gene4426;Dbxref=GeneID:18263196;Name=SDY_4808;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4808
NC_007606.1	RefSeq	CDS	4204596	4204868	.	-	0	ID=cds3916;Parent=gene4426;Dbxref=Genbank:YP_009000882.1,GeneID:18263196;Name=YP_009000882.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000882.1;transl_table=11
NC_007606.1	RefSeq	gene	4205317	4206093	.	-	.	ID=gene4427;Dbxref=GeneID:3798612;Name=SDY_4490;Note=SDY4490;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4490
NC_007606.1	RefSeq	CDS	4205317	4206093	.	-	0	ID=cds3917;Parent=gene4427;Dbxref=Genbank:YP_405857.1,GeneID:3798612;Name=YP_405857.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_405857.1;transl_table=11
NC_007606.1	RefSeq	region	4205335	4206600	.	-	.	ID=id700;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4206234	4206536	.	-	.	ID=gene4428;Dbxref=GeneID:3798613;Name=SDY_4491;Note=SDY4491;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4491
NC_007606.1	RefSeq	CDS	4206234	4206536	.	-	0	ID=cds3918;Parent=gene4428;Dbxref=Genbank:YP_405858.1,GeneID:3798613;Name=YP_405858.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_405858.1;transl_table=11
NC_007606.1	RefSeq	gene	4206637	4206981	.	+	.	ID=gene4429;Dbxref=GeneID:3798614;Name=SDY_4492;Note=SDY4492;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4492
NC_007606.1	RefSeq	CDS	4206637	4206981	.	+	0	ID=cds3919;Parent=gene4429;Dbxref=Genbank:YP_405859.1,GeneID:3798614;Name=YP_405859.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405859.1;transl_table=11
NC_007606.1	RefSeq	region	4206979	4208197	.	-	.	ID=id701;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4207854	4208156	.	-	.	ID=gene4430;Dbxref=GeneID:3798617;Name=SDY_4495;Note=SDY4495;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4495
NC_007606.1	RefSeq	CDS	4207854	4208156	.	-	0	ID=cds3920;Parent=gene4430;Dbxref=Genbank:YP_405862.1,GeneID:3798617;Name=YP_405862.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS911 transposase InsN;protein_id=YP_405862.1;transl_table=11
NC_007606.1	RefSeq	region	4208198	4208964	.	+	.	ID=id702;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4208255	4208527	.	+	.	ID=gene4431;Dbxref=GeneID:18263197;Name=SDY_4809;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4809
NC_007606.1	RefSeq	CDS	4208255	4208527	.	+	0	ID=cds3921;Parent=gene4431;Dbxref=Genbank:YP_009000883.1,GeneID:18263197;Name=YP_009000883.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000883.1;transl_table=11
NC_007606.1	RefSeq	gene	4208554	4208949	.	+	.	ID=gene4432;Dbxref=GeneID:3798637;Name=SDY_4496;Note=SDY4496;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4496
NC_007606.1	RefSeq	CDS	4208554	4208949	.	+	0	ID=cds3922;Parent=gene4432;Dbxref=Genbank:YP_405863.1,GeneID:3798637;Name=YP_405863.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405863.1;transl_table=11
NC_007606.1	RefSeq	gene	4209070	4210200	.	+	.	ID=gene4433;Dbxref=GeneID:3798638;Name=yicK;Note=SDY4497%3B contains in-frame stop codon%3B original product: two-module transport protein;gbkey=Gene;gene=yicK;gene_biotype=pseudogene;locus_tag=SDY_4497;pseudo=true
NC_007606.1	RefSeq	gene	4210361	4211284	.	+	.	ID=gene4434;Dbxref=GeneID:3798639;Name=yicL;Note=SDY4498;gbkey=Gene;gene=yicL;gene_biotype=protein_coding;locus_tag=SDY_4498
NC_007606.1	RefSeq	CDS	4210361	4211284	.	+	0	ID=cds3923;Parent=gene4434;Dbxref=Genbank:YP_405864.1,GeneID:3798639;Name=YP_405864.1;Note=Code: GER%3B COG: COG0697;gbkey=CDS;gene=yicL;product=permease;protein_id=YP_405864.1;transl_table=11
NC_007606.1	RefSeq	gene	4211288	4212106	.	-	.	ID=gene4435;Dbxref=GeneID:3798640;Name=nlpA;Note=SDY4499;gbkey=Gene;gene=nlpA;gene_biotype=protein_coding;locus_tag=SDY_4499
NC_007606.1	RefSeq	CDS	4211288	4212106	.	-	0	ID=cds3924;Parent=gene4435;Dbxref=Genbank:YP_405865.1,GeneID:3798640;Name=YP_405865.1;Note=Code: P%3B COG: COG1464;gbkey=CDS;gene=nlpA;product=hypothetical protein;protein_id=YP_405865.1;transl_table=11
NC_007606.1	RefSeq	region	4212174	4212941	.	-	.	ID=id703;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4212189	4212566	.	-	.	ID=gene4436;Dbxref=GeneID:3798641;Name=insB;Note=SDY4500;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4500
NC_007606.1	RefSeq	CDS	4212189	4212566	.	-	0	ID=cds3925;Parent=gene4436;Dbxref=Genbank:YP_405866.1,GeneID:3798641;Name=YP_405866.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405866.1;transl_table=11
NC_007606.1	RefSeq	gene	4212611	4212886	.	-	.	ID=gene4437;Dbxref=GeneID:3798642;Name=insA;Note=SDY4501;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4501
NC_007606.1	RefSeq	CDS	4212611	4212886	.	-	0	ID=cds3926;Parent=gene4437;Dbxref=Genbank:YP_405867.1,GeneID:3798642;Name=YP_405867.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405867.1;transl_table=11
NC_007606.1	RefSeq	gene	4213119	4214768	.	-	.	ID=gene4438;Dbxref=GeneID:3798643;Name=yjcE;Note=SDY4502;gbkey=Gene;gene=yjcE;gene_biotype=protein_coding;locus_tag=SDY_4502
NC_007606.1	RefSeq	CDS	4213119	4214768	.	-	0	ID=cds3927;Parent=gene4438;Dbxref=Genbank:YP_405868.1,GeneID:3798643;Name=YP_405868.1;Note=Code: P%3B COG: COG0025;gbkey=CDS;gene=yjcE;product=hypothetical protein;protein_id=YP_405868.1;transl_table=11
NC_007606.1	RefSeq	gene	4214919	4216268	.	-	.	ID=gene4439;Dbxref=GeneID:3798644;Name=yjcD;Note=SDY4503;gbkey=Gene;gene=yjcD;gene_biotype=protein_coding;locus_tag=SDY_4503
NC_007606.1	RefSeq	CDS	4214919	4216268	.	-	0	ID=cds3928;Parent=gene4439;Dbxref=Genbank:YP_405869.1,GeneID:3798644;Name=YP_405869.1;Note=Code: R%3B COG: COG2252;gbkey=CDS;gene=yjcD;product=hypothetical protein;protein_id=YP_405869.1;transl_table=11
NC_007606.1	RefSeq	gene	4216815	4217279	.	-	.	ID=gene4440;Dbxref=GeneID:3798645;Name=soxR;Note=SDY4504;gbkey=Gene;gene=soxR;gene_biotype=protein_coding;locus_tag=SDY_4504
NC_007606.1	RefSeq	CDS	4216815	4217279	.	-	0	ID=cds3929;Parent=gene4440;Dbxref=Genbank:YP_405870.1,GeneID:3798645;Name=YP_405870.1;Note=Code: K%3B COG: COG0789;gbkey=CDS;gene=soxR;product=redox-sensing activator of soxS;protein_id=YP_405870.1;transl_table=11
NC_007606.1	RefSeq	gene	4217365	4217688	.	+	.	ID=gene4441;Dbxref=GeneID:3798646;Name=soxS;Note=SDY4505;gbkey=Gene;gene=soxS;gene_biotype=protein_coding;locus_tag=SDY_4505
NC_007606.1	RefSeq	CDS	4217365	4217688	.	+	0	ID=cds3930;Parent=gene4441;Dbxref=Genbank:YP_405871.1,GeneID:3798646;Name=YP_405871.1;Note=regulates genes involved in response to oxidative stress;gbkey=CDS;gene=soxS;product=DNA-binding transcriptional regulator SoxS;protein_id=YP_405871.1;transl_table=11
NC_007606.1	RefSeq	region	4217897	4218665	.	+	.	ID=id704;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4217957	4218229	.	+	.	ID=gene4442;Dbxref=GeneID:18263198;Name=SDY_4810;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4810
NC_007606.1	RefSeq	CDS	4217957	4218229	.	+	0	ID=cds3931;Parent=gene4442;Dbxref=Genbank:YP_009000884.1,GeneID:18263198;Name=YP_009000884.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000884.1;transl_table=11
NC_007606.1	RefSeq	gene	4218256	4218651	.	+	.	ID=gene4443;Dbxref=GeneID:3798647;Name=SDY_4506;Note=SDY4506;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4506
NC_007606.1	RefSeq	CDS	4218256	4218651	.	+	0	ID=cds3932;Parent=gene4443;Dbxref=Genbank:YP_405872.1,GeneID:3798647;Name=YP_405872.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405872.1;transl_table=11
NC_007606.1	RefSeq	gene	4219013	4219294	.	+	.	ID=gene4444;Dbxref=GeneID:3798648;Name=yjcB;Note=SDY4507;gbkey=Gene;gene=yjcB;gene_biotype=protein_coding;locus_tag=SDY_4507
NC_007606.1	RefSeq	CDS	4219013	4219294	.	+	0	ID=cds3933;Parent=gene4444;Dbxref=Genbank:YP_405873.2,GeneID:3798648;Name=YP_405873.2;gbkey=CDS;gene=yjcB;product=hypothetical protein;protein_id=YP_405873.2;transl_table=11
NC_007606.1	RefSeq	gene	4219393	4219929	.	-	.	ID=gene4445;Dbxref=GeneID:3798649;Name=ssb;Note=SDY4508;gbkey=Gene;gene=ssb;gene_biotype=protein_coding;locus_tag=SDY_4508
NC_007606.1	RefSeq	CDS	4219393	4219929	.	-	0	ID=cds3934;Parent=gene4445;Dbxref=Genbank:YP_405874.1,GeneID:3798649;Name=YP_405874.1;Note=binds to single stranded DNA and PriA helcase facilitate replication restart;gbkey=CDS;gene=ssb;product=single-stranded DNA-binding protein;protein_id=YP_405874.1;transl_table=11
NC_007606.1	RefSeq	gene	4220183	4223005	.	+	.	ID=gene4446;Dbxref=GeneID:3798650;Name=uvrA;Note=SDY4509;gbkey=Gene;gene=uvrA;gene_biotype=protein_coding;locus_tag=SDY_4509
NC_007606.1	RefSeq	CDS	4220183	4223005	.	+	0	ID=cds3935;Parent=gene4446;Dbxref=Genbank:YP_405875.1,GeneID:3798650;Name=YP_405875.1;Note=''The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB%2C the uvrA molecules dissociate'';gbkey=CDS;gene=uvrA;product=excinuclease ABC subunit A;protein_id=YP_405875.1;transl_table=11
NC_007606.1	RefSeq	gene	4223040	4223396	.	-	.	ID=gene4447;Dbxref=GeneID:3798651;Name=yjbR;Note=SDY4510;gbkey=Gene;gene=yjbR;gene_biotype=protein_coding;locus_tag=SDY_4510
NC_007606.1	RefSeq	CDS	4223040	4223396	.	-	0	ID=cds3936;Parent=gene4447;Dbxref=Genbank:YP_405876.1,GeneID:3798651;Name=YP_405876.1;Note=Code: S%3B COG: COG2315;gbkey=CDS;gene=yjbR;product=hypothetical protein;protein_id=YP_405876.1;transl_table=11
NC_007606.1	RefSeq	gene	4223400	4223816	.	-	.	ID=gene4448;Dbxref=GeneID:3798652;Name=yjbQ;Note=SDY4511;gbkey=Gene;gene=yjbQ;gene_biotype=protein_coding;locus_tag=SDY_4511
NC_007606.1	RefSeq	CDS	4223400	4223816	.	-	0	ID=cds3937;Parent=gene4448;Dbxref=Genbank:YP_405877.1,GeneID:3798652;Name=YP_405877.1;Note=Code: S%3B COG: COG0432;gbkey=CDS;gene=yjbQ;product=hypothetical protein;protein_id=YP_405877.1;transl_table=11
NC_007606.1	RefSeq	gene	4223927	4225412	.	-	.	ID=gene4449;Dbxref=GeneID:3798655;Name=aphA;Note=SDY4514%3B contains IS1 insertion%3B original product: diadenosine tetraphosphatase;gbkey=Gene;gene=aphA;gene_biotype=pseudogene;locus_tag=SDY_4514;pseudo=true
NC_007606.1	RefSeq	region	4224125	4224892	.	-	.	ID=id705;Dbxref=GeneID:3798655;gbkey=mobile_element;gene=aphA
NC_007606.1	RefSeq	gene	4224140	4224517	.	-	.	ID=gene4450;Dbxref=GeneID:3798653;Name=insB;Note=SDY4512;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4512
NC_007606.1	RefSeq	CDS	4224140	4224517	.	-	0	ID=cds3938;Parent=gene4450;Dbxref=Genbank:YP_405878.1,GeneID:3798653;Name=YP_405878.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405878.1;transl_table=11
NC_007606.1	RefSeq	gene	4224562	4224837	.	-	.	ID=gene4451;Dbxref=GeneID:3798654;Name=insA;Note=SDY4513;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4513
NC_007606.1	RefSeq	CDS	4224562	4224837	.	-	0	ID=cds3939;Parent=gene4451;Dbxref=Genbank:YP_405879.1,GeneID:3798654;Name=YP_405879.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405879.1;transl_table=11
NC_007606.1	RefSeq	region	4225576	4226354	.	+	.	ID=id706;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4225640	4225912	.	+	.	ID=gene4452;Dbxref=GeneID:18263199;Name=SDY_4811;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4811
NC_007606.1	RefSeq	CDS	4225640	4225912	.	+	0	ID=cds3940;Parent=gene4452;Dbxref=Genbank:YP_009000885.1,GeneID:18263199;Name=YP_009000885.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000885.1;transl_table=11
NC_007606.1	RefSeq	gene	4226602	4227087	.	+	.	ID=gene4453;Dbxref=GeneID:3795712;Name=SDY_4517;Note=SDY4517;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4517
NC_007606.1	RefSeq	CDS	4226602	4227087	.	+	0	ID=cds3941;Parent=gene4453;Dbxref=Genbank:YP_405882.1,GeneID:3795712;Name=YP_405882.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405882.1;transl_table=11
NC_007606.1	RefSeq	region	4227175	4227951	.	-	.	ID=id707;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4227190	4227702	.	-	.	ID=gene4454;Dbxref=GeneID:3795713;Name=SDY_4518;Note=SDY4518;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4518;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	4228095	4229288	.	-	.	ID=gene4455;Dbxref=GeneID:3795715;Name=tyrB;Note=SDY4520;gbkey=Gene;gene=tyrB;gene_biotype=protein_coding;locus_tag=SDY_4520
NC_007606.1	RefSeq	CDS	4228095	4229288	.	-	0	ID=cds3942;Parent=gene4455;Dbxref=Genbank:YP_405885.1,GeneID:3795715;Name=YP_405885.1;Note=catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate;gbkey=CDS;gene=tyrB;product=aromatic amino acid aminotransferase;protein_id=YP_405885.1;transl_table=11
NC_007606.1	RefSeq	gene	4229531	4230610	.	-	.	ID=gene4456;Dbxref=GeneID:3795716;Name=alr;Note=SDY4521;gbkey=Gene;gene=alr;gene_biotype=protein_coding;locus_tag=SDY_4521
NC_007606.1	RefSeq	CDS	4229531	4230610	.	-	0	ID=cds3943;Parent=gene4456;Dbxref=Genbank:YP_405886.1,GeneID:3795716;Name=YP_405886.1;Note=converts L-alanine to D-alanine which is used in cell wall biosynthesis%3B binds one pyridoxal phosphate per monomer%3B forms a homodimer;gbkey=CDS;gene=alr;product=alanine racemase;protein_id=YP_405886.1;transl_table=11
NC_007606.1	RefSeq	gene	4230663	4232078	.	-	.	ID=gene4457;Dbxref=GeneID:3795717;Name=dnaB;Note=SDY4522;gbkey=Gene;gene=dnaB;gene_biotype=protein_coding;locus_tag=SDY_4522
NC_007606.1	RefSeq	CDS	4230663	4232078	.	-	0	ID=cds3944;Parent=gene4457;Dbxref=Genbank:YP_405887.1,GeneID:3795717;Name=YP_405887.1;Note=unwinds double stranded DNA;gbkey=CDS;gene=dnaB;product=replicative DNA helicase;protein_id=YP_405887.1;transl_table=11
NC_007606.1	RefSeq	gene	4232161	4233144	.	+	.	ID=gene4458;Dbxref=GeneID:3795718;Name=qor;Note=SDY4523;gbkey=Gene;gene=qor;gene_biotype=protein_coding;locus_tag=SDY_4523
NC_007606.1	RefSeq	CDS	4232161	4233144	.	+	0	ID=cds3945;Parent=gene4458;Dbxref=Genbank:YP_405888.1,GeneID:3795718;Name=YP_405888.1;Note=Code: CR%3B COG: COG0604;gbkey=CDS;gene=qor;product=quinone oxidoreductase;protein_id=YP_405888.1;transl_table=11
NC_007606.1	RefSeq	gene	4233310	4233552	.	-	.	ID=gene4459;Dbxref=GeneID:3795719;Name=pspG;Note=SDY4524;gbkey=Gene;gene=pspG;gene_biotype=protein_coding;locus_tag=SDY_4524
NC_007606.1	RefSeq	CDS	4233310	4233552	.	-	0	ID=cds3946;Parent=gene4459;Dbxref=Genbank:YP_405889.2,GeneID:3795719;Name=YP_405889.2;Note=coordinately regulated along with pspA%3B PspF-dependent induction in response to secretin overexpression in Yersinia;gbkey=CDS;gene=pspG;product=phage shock protein G;protein_id=YP_405889.2;transl_table=11
NC_007606.1	RefSeq	gene	4233686	4234723	.	-	.	ID=gene4460;Dbxref=GeneID:3795720;Name=yjbN;Note=SDY4525;gbkey=Gene;gene=yjbN;gene_biotype=protein_coding;locus_tag=SDY_4525
NC_007606.1	RefSeq	CDS	4233686	4234723	.	-	0	ID=cds3947;Parent=gene4460;Dbxref=Genbank:YP_405890.1,GeneID:3795720;Name=YP_405890.1;Note=Code: J%3B COG: COG0042;gbkey=CDS;gene=yjbN;product=tRNA-dihydrouridine synthase A;protein_id=YP_405890.1;transl_table=11
NC_007606.1	RefSeq	region	4235020	4235388	.	-	.	ID=id708;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4235281	4235607	.	+	.	ID=gene4461;Dbxref=GeneID:3795722;Name=SDY_4527;Note=SDY4527;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4527
NC_007606.1	RefSeq	CDS	4235281	4235607	.	+	0	ID=cds3948;Parent=gene4461;Dbxref=Genbank:YP_405892.1,GeneID:3795722;Name=YP_405892.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405892.1;transl_table=11
NC_007606.1	RefSeq	region	4235379	4235586	.	-	.	ID=id709;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4235569	4235859	.	-	.	ID=gene4462;Dbxref=GeneID:18263200;Name=SDY_4527a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4527a
NC_007606.1	RefSeq	CDS	4235569	4235859	.	-	0	ID=cds3949;Parent=gene4462;Dbxref=Genbank:YP_009000886.1,GeneID:18263200;Name=YP_009000886.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_009000886.1;transl_table=11
NC_007606.1	RefSeq	gene	4236178	4236693	.	+	.	ID=gene4463;Dbxref=GeneID:3795723;Name=yjbK;Note=SDY4528;gbkey=Gene;gene=yjbK;gene_biotype=protein_coding;locus_tag=SDY_4528
NC_007606.1	RefSeq	CDS	4236178	4236693	.	+	0	ID=cds3950;Parent=gene4463;Dbxref=Genbank:YP_405893.2,GeneID:3795723;Name=YP_405893.2;Note=''Acts as a negative controlling element%2C employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB'';gbkey=CDS;gene=yjbK;product=zinc uptake transcriptional repressor;protein_id=YP_405893.2;transl_table=11
NC_007606.1	RefSeq	gene	4236735	4236944	.	-	.	ID=gene4464;Dbxref=GeneID:3795724;Name=yjbJ;Note=SDY4529;gbkey=Gene;gene=yjbJ;gene_biotype=protein_coding;locus_tag=SDY_4529
NC_007606.1	RefSeq	CDS	4236735	4236944	.	-	0	ID=cds3951;Parent=gene4464;Dbxref=Genbank:YP_405894.1,GeneID:3795724;Name=YP_405894.1;Note=unknown function%3B highly abundant protein in vivo%3B overexpressed under high NaCl concentrations%3B part of the sigma S regulon%3B non-essential;gbkey=CDS;gene=yjbJ;product=stress-response protein;protein_id=YP_405894.1;transl_table=11
NC_007606.1	RefSeq	gene	4237060	4238385	.	-	.	ID=gene4465;Dbxref=GeneID:3795725;Name=dinF;Note=SDY4530;gbkey=Gene;gene=dinF;gene_biotype=protein_coding;locus_tag=SDY_4530
NC_007606.1	RefSeq	CDS	4237060	4238385	.	-	0	ID=cds3952;Parent=gene4465;Dbxref=Genbank:YP_405895.2,GeneID:3795725;Name=YP_405895.2;Note=Code: V%3B COG: COG0534;gbkey=CDS;gene=dinF;product=DNA-damage-inducible SOS response protein;protein_id=YP_405895.2;transl_table=11
NC_007606.1	RefSeq	gene	4238458	4239066	.	-	.	ID=gene4466;Dbxref=GeneID:3795726;Name=lexA;Note=SDY4531;gbkey=Gene;gene=lexA;gene_biotype=protein_coding;locus_tag=SDY_4531
NC_007606.1	RefSeq	CDS	4238458	4239066	.	-	0	ID=cds3953;Parent=gene4466;Dbxref=Genbank:YP_405896.1,GeneID:3795726;Name=YP_405896.1;Note=Represses a number of genes involved in the response to DNA damage;gbkey=CDS;gene=lexA;product=LexA repressor;protein_id=YP_405896.1;transl_table=11
NC_007606.1	RefSeq	gene	4239176	4239544	.	-	.	ID=gene4467;Dbxref=GeneID:3795727;Name=dgkA;Note=SDY4532;gbkey=Gene;gene=dgkA;gene_biotype=protein_coding;locus_tag=SDY_4532
NC_007606.1	RefSeq	CDS	4239176	4239544	.	-	0	ID=cds3954;Parent=gene4467;Dbxref=Genbank:YP_405897.1,GeneID:3795727;Name=YP_405897.1;Note=Code: M%3B COG: COG0818;gbkey=CDS;gene=dgkA;product=diacylglycerol kinase;protein_id=YP_405897.1;transl_table=11
NC_007606.1	RefSeq	gene	4239715	4242138	.	+	.	ID=gene4468;Dbxref=GeneID:3795728;Name=plsB;Note=SDY4533;gbkey=Gene;gene=plsB;gene_biotype=protein_coding;locus_tag=SDY_4533
NC_007606.1	RefSeq	CDS	4239715	4242138	.	+	0	ID=cds3955;Parent=gene4468;Dbxref=Genbank:YP_405898.2,GeneID:3795728;Name=YP_405898.2;Note=PlsB%3B catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA;gbkey=CDS;gene=plsB;product=glycerol-3-phosphate acyltransferase;protein_id=YP_405898.2;transl_table=11
NC_007606.1	RefSeq	gene	4242293	4243165	.	-	.	ID=gene4469;Dbxref=GeneID:3795729;Name=ubiA;Note=SDY4534;gbkey=Gene;gene=ubiA;gene_biotype=protein_coding;locus_tag=SDY_4534
NC_007606.1	RefSeq	CDS	4242293	4243165	.	-	0	ID=cds3956;Parent=gene4469;Dbxref=Genbank:YP_405899.1,GeneID:3795729;Name=YP_405899.1;Note=''catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate%2C as part of the ubiquinone biosynthesis pathway'';gbkey=CDS;gene=ubiA;product=4-hydroxybenzoate octaprenyltransferase;protein_id=YP_405899.1;transl_table=11
NC_007606.1	RefSeq	gene	4243178	4243675	.	-	.	ID=gene4470;Dbxref=GeneID:3795538;Name=ubiC;Note=SDY4535;gbkey=Gene;gene=ubiC;gene_biotype=protein_coding;locus_tag=SDY_4535
NC_007606.1	RefSeq	CDS	4243178	4243675	.	-	0	ID=cds3957;Parent=gene4470;Dbxref=Genbank:YP_405900.2,GeneID:3795538;Name=YP_405900.2;Note=catalyzes the formation of 4-hydroxybenzoate from chorismate;gbkey=CDS;gene=ubiC;product=chorismate pyruvate lyase;protein_id=YP_405900.2;transl_table=11
NC_007606.1	RefSeq	region	4244167	4244934	.	+	.	ID=id710;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4244222	4244497	.	+	.	ID=gene4471;Dbxref=GeneID:3795539;Name=insA;Note=SDY4536;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_4536
NC_007606.1	RefSeq	CDS	4244222	4244497	.	+	0	ID=cds3958;Parent=gene4471;Dbxref=Genbank:YP_405901.1,GeneID:3795539;Name=YP_405901.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;gene=insA;product=insertion element IS1 protein InsA;protein_id=YP_405901.1;transl_table=11
NC_007606.1	RefSeq	gene	4244542	4244919	.	+	.	ID=gene4472;Dbxref=GeneID:3795540;Name=insB;Note=SDY4537;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_4537
NC_007606.1	RefSeq	CDS	4244542	4244919	.	+	0	ID=cds3959;Parent=gene4472;Dbxref=Genbank:YP_405902.1,GeneID:3795540;Name=YP_405902.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;gene=insB;product=insertion element iso-IS1d protein InsB;protein_id=YP_405902.1;transl_table=11
NC_007606.1	RefSeq	gene	4244947	4245561	.	+	.	ID=gene4473;Dbxref=GeneID:3795541;Name=yiaV;Note=SDY4538%3B truncated%3B original product:  membrane protein;gbkey=Gene;gene=yiaV;gene_biotype=pseudogene;locus_tag=SDY_4538;pseudo=true
NC_007606.1	RefSeq	gene	4245585	4246145	.	-	.	ID=gene4474;Dbxref=GeneID:3795542;Name=yiaU;Note=SDY4539%3B truncated%3B original product:  transcriptional regulator LYSR-type;gbkey=Gene;gene=yiaU;gene_biotype=pseudogene;locus_tag=SDY_4539;pseudo=true
NC_007606.1	RefSeq	region	4246146	4246912	.	+	.	ID=id711;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4246204	4246476	.	+	.	ID=gene4475;Dbxref=GeneID:18263201;Name=SDY_4812;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4812
NC_007606.1	RefSeq	CDS	4246204	4246476	.	+	0	ID=cds3960;Parent=gene4475;Dbxref=Genbank:YP_009000887.1,GeneID:18263201;Name=YP_009000887.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000887.1;transl_table=11
NC_007606.1	RefSeq	gene	4246503	4246898	.	+	.	ID=gene4476;Dbxref=GeneID:3795543;Name=SDY_4540;Note=SDY4540;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4540
NC_007606.1	RefSeq	CDS	4246503	4246898	.	+	0	ID=cds3961;Parent=gene4476;Dbxref=Genbank:YP_405903.1,GeneID:3795543;Name=YP_405903.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405903.1;transl_table=11
NC_007606.1	RefSeq	gene	4247198	4248073	.	+	.	ID=gene4477;Dbxref=GeneID:3795544;Name=yhjC;Note=SDY4541;gbkey=Gene;gene=yhjC;gene_biotype=protein_coding;locus_tag=SDY_4541
NC_007606.1	RefSeq	CDS	4247198	4248073	.	+	0	ID=cds3962;Parent=gene4477;Dbxref=Genbank:YP_405904.1,GeneID:3795544;Name=YP_405904.1;Note=Code: K%3B COG: COG0583;gbkey=CDS;gene=yhjC;product=LysR family transcriptional regulator;protein_id=YP_405904.1;transl_table=11
NC_007606.1	RefSeq	gene	4248122	4249135	.	+	.	ID=gene4478;Dbxref=GeneID:3795545;Name=yhjD;Note=SDY4542;gbkey=Gene;gene=yhjD;gene_biotype=protein_coding;locus_tag=SDY_4542
NC_007606.1	RefSeq	CDS	4248122	4249135	.	+	0	ID=cds3963;Parent=gene4478;Dbxref=Genbank:YP_405905.1,GeneID:3795545;Name=YP_405905.1;Note=Code: S%3B COG: COG1295;gbkey=CDS;gene=yhjD;product=hypothetical protein;protein_id=YP_405905.1;transl_table=11
NC_007606.1	RefSeq	gene	4249527	4250849	.	+	.	ID=gene4479;Dbxref=GeneID:3795546;Name=yhjE;Note=SDY4543;gbkey=Gene;gene=yhjE;gene_biotype=protein_coding;locus_tag=SDY_4543
NC_007606.1	RefSeq	CDS	4249527	4250849	.	+	0	ID=cds3964;Parent=gene4479;Dbxref=Genbank:YP_405906.1,GeneID:3795546;Name=YP_405906.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=yhjE;product=transport protein;protein_id=YP_405906.1;transl_table=11
NC_007606.1	RefSeq	gene	4251031	4253106	.	-	.	ID=gene4480;Dbxref=GeneID:3795547;Name=yhjG;Note=SDY4544;gbkey=Gene;gene=yhjG;gene_biotype=protein_coding;locus_tag=SDY_4544
NC_007606.1	RefSeq	CDS	4251031	4253106	.	-	0	ID=cds3965;Parent=gene4480;Dbxref=Genbank:YP_405907.1,GeneID:3795547;Name=YP_405907.1;Note=Code: M%3B COG: COG2982;gbkey=CDS;gene=yhjG;product=hypothetical protein;protein_id=YP_405907.1;transl_table=11
NC_007606.1	RefSeq	gene	4253161	4253931	.	-	.	ID=gene4481;Dbxref=GeneID:3795548;Name=yhjH;Note=SDY4545;gbkey=Gene;gene=yhjH;gene_biotype=protein_coding;locus_tag=SDY_4545
NC_007606.1	RefSeq	CDS	4253161	4253931	.	-	0	ID=cds3966;Parent=gene4481;Dbxref=Genbank:YP_405908.1,GeneID:3795548;Name=YP_405908.1;Note=in Escherichia coli this protein is involved in flagellar function;gbkey=CDS;gene=yhjH;product=diguanylate phosphodiesterase;protein_id=YP_405908.1;transl_table=11
NC_007606.1	RefSeq	gene	4254160	4255089	.	+	.	ID=gene4482;Dbxref=GeneID:3795549;Name=SDY_4546;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4546
NC_007606.1	RefSeq	CDS	4254160	4255089	.	+	0	ID=cds3967;Parent=gene4482;Dbxref=Genbank:YP_009000888.1,GeneID:3795549;Name=YP_009000888.1;gbkey=CDS;product=ketodeoxygluconokinase;protein_id=YP_009000888.1;transl_table=11
NC_007606.1	RefSeq	gene	4255185	4256681	.	-	.	ID=gene4483;Dbxref=GeneID:3795550;Name=yhjJ;Note=SDY4547;gbkey=Gene;gene=yhjJ;gene_biotype=protein_coding;locus_tag=SDY_4547
NC_007606.1	RefSeq	CDS	4255185	4256681	.	-	0	ID=cds3968;Parent=gene4483;Dbxref=Genbank:YP_405909.1,GeneID:3795550;Name=YP_405909.1;Note=Code: R%3B COG: COG0612;gbkey=CDS;gene=yhjJ;product=hypothetical protein;protein_id=YP_405909.1;transl_table=11
NC_007606.1	RefSeq	gene	4256902	4258188	.	-	.	ID=gene4484;Dbxref=GeneID:3795551;Name=dctA;Note=SDY4548;gbkey=Gene;gene=dctA;gene_biotype=protein_coding;locus_tag=SDY_4548
NC_007606.1	RefSeq	CDS	4256902	4258188	.	-	0	ID=cds3969;Parent=gene4484;Dbxref=Genbank:YP_405910.1,GeneID:3795551;Name=YP_405910.1;Note=involved in the transport of C4-dicarboxylates across the membrane;gbkey=CDS;gene=dctA;product=C4-dicarboxylate transporter DctA;protein_id=YP_405910.1;transl_table=11
NC_007606.1	RefSeq	gene	4258371	4260326	.	-	.	ID=gene4485;Dbxref=GeneID:3795552;Name=yhjK;Note=SDY4549;gbkey=Gene;gene=yhjK;gene_biotype=protein_coding;locus_tag=SDY_4549
NC_007606.1	RefSeq	CDS	4258371	4260326	.	-	0	ID=cds3970;Parent=gene4485;Dbxref=Genbank:YP_405911.1,GeneID:3795552;Name=YP_405911.1;Note=HmsP in Yersinia pestis plays a role in invasion of epithelial cells%3B the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation%3B inner membrane protein%3B similar to a  phosphodiesterase from E. coli;gbkey=CDS;gene=yhjK;product=phosphodiesterase;protein_id=YP_405911.1;transl_table=11
NC_007606.1	RefSeq	gene	4260441	4263914	.	-	.	ID=gene4486;Dbxref=GeneID:3795553;Name=yhjL;Note=SDY4550%3B contains in-frame stop codon%3B original product:  oxidoreductase subunit;gbkey=Gene;gene=yhjL;gene_biotype=pseudogene;locus_tag=SDY_4550;pseudo=true
NC_007606.1	RefSeq	gene	4263974	4265002	.	-	.	ID=gene4487;Dbxref=GeneID:3795554;Name=yhjM;Note=SDY4551%3B contains in-frame stop codon%3B original product:  endoglucanase;gbkey=Gene;gene=yhjM;gene_biotype=pseudogene;locus_tag=SDY_4551;pseudo=true
NC_007606.1	RefSeq	gene	4265009	4267348	.	-	.	ID=gene4488;Dbxref=GeneID:3795555;Name=yhjN;Note=SDY4552;gbkey=Gene;gene=yhjN;gene_biotype=protein_coding;locus_tag=SDY_4552
NC_007606.1	RefSeq	CDS	4265009	4267348	.	-	0	ID=cds3971;Parent=gene4488;Dbxref=Genbank:YP_405912.1,GeneID:3795555;Name=YP_405912.1;Note=''binds the cellulose synthase activator%2C bis-(3'-5') cyclic diguanylic acid (c-di-GMP)'';gbkey=CDS;gene=yhjN;product=cellulose synthase regulator protein;protein_id=YP_405912.1;transl_table=11
NC_007606.1	RefSeq	gene	4267359	4269977	.	-	.	ID=gene4489;Dbxref=GeneID:3795556;Name=bcsA;Note=SDY4553;gbkey=Gene;gene=bcsA;gene_biotype=protein_coding;locus_tag=SDY_4553
NC_007606.1	RefSeq	CDS	4267359	4269977	.	-	0	ID=cds3972;Parent=gene4489;Dbxref=Genbank:YP_405913.2,GeneID:3795556;Name=YP_405913.2;Note=''polymerizes uridine 5'-diphosphate glucose to cellulose%3B acts with BcsB%2C BcsZ and BcsC in cellulose biosynthesis'';gbkey=CDS;gene=bcsA;product=cellulose synthase catalytic subunit;protein_id=YP_405913.2;transl_table=11
NC_007606.1	RefSeq	gene	4269974	4270726	.	-	.	ID=gene4490;Dbxref=GeneID:3795557;Name=yhjQ;Note=''SDY4554%3B contains in-frame stop codon%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yhjQ;gene_biotype=pseudogene;locus_tag=SDY_4554;pseudo=true
NC_007606.1	RefSeq	gene	4270738	4270926	.	-	.	ID=gene4491;Dbxref=GeneID:3795653;Name=yhjR;Note=SDY4555;gbkey=Gene;gene=yhjR;gene_biotype=protein_coding;locus_tag=SDY_4555
NC_007606.1	RefSeq	CDS	4270738	4270926	.	-	0	ID=cds3973;Parent=gene4491;Dbxref=Genbank:YP_405914.1,GeneID:3795653;Name=YP_405914.1;gbkey=CDS;gene=yhjR;product=hypothetical protein;protein_id=YP_405914.1;transl_table=11
NC_007606.1	RefSeq	region	4271643	4272410	.	-	.	ID=id712;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4271658	4272035	.	-	.	ID=gene4492;Dbxref=GeneID:3795308;Name=SDY_4557;Note=SDY4557;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4557
NC_007606.1	RefSeq	CDS	4271658	4272035	.	-	0	ID=cds3974;Parent=gene4492;Dbxref=Genbank:YP_405915.1,GeneID:3795308;Name=YP_405915.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405915.1;transl_table=11
NC_007606.1	RefSeq	gene	4272080	4272355	.	-	.	ID=gene4493;Dbxref=GeneID:3795309;Name=SDY_4558;Note=SDY4558;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4558
NC_007606.1	RefSeq	CDS	4272080	4272355	.	-	0	ID=cds3975;Parent=gene4493;Dbxref=Genbank:YP_405916.1,GeneID:3795309;Name=YP_405916.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;product=insertion element IS1 protein InsA;protein_id=YP_405916.1;transl_table=11
NC_007606.1	RefSeq	region	4272450	4273215	.	-	.	ID=id713;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4272464	4272859	.	-	.	ID=gene4494;Dbxref=GeneID:3795655;Name=SDY_4559;Note=SDY4559;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4559
NC_007606.1	RefSeq	CDS	4272464	4272859	.	-	0	ID=cds3976;Parent=gene4494;Dbxref=Genbank:YP_405917.1,GeneID:3795655;Name=YP_405917.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405917.1;transl_table=11
NC_007606.1	RefSeq	gene	4272938	4274304	.	+	.	ID=gene4495;Dbxref=GeneID:3795654;Name=yhjS;Note=SDY4556;gbkey=Gene;gene=yhjS;gene_biotype=pseudogene;locus_tag=SDY_4556;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	4274489	4276167	.	+	.	ID=gene4496;Dbxref=GeneID:3795657;Name=yhjU;Note=''SDY4561%3B frameshift%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yhjU;gene_biotype=pseudogene;locus_tag=SDY_4561;pseudo=true
NC_007606.1	RefSeq	gene	4276254	4276451	.	-	.	ID=gene4497;Dbxref=GeneID:3795656;Name=SDY_4560;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4560
NC_007606.1	RefSeq	CDS	4276254	4276451	.	-	0	ID=cds3977;Parent=gene4497;Dbxref=Genbank:YP_009000889.1,GeneID:3795656;Name=YP_009000889.1;gbkey=CDS;product=small toxic polypeptide;protein_id=YP_009000889.1;transl_table=11
NC_007606.1	RefSeq	gene	4276837	4278108	.	+	.	ID=gene4498;Dbxref=GeneID:3795658;Name=yhjV;Note=SDY4562;gbkey=Gene;gene=yhjV;gene_biotype=protein_coding;locus_tag=SDY_4562
NC_007606.1	RefSeq	CDS	4276837	4278108	.	+	0	ID=cds3978;Parent=gene4498;Dbxref=Genbank:YP_405919.1,GeneID:3795658;Name=YP_405919.1;Note=Code: E%3B COG: COG0814;gbkey=CDS;gene=yhjV;product=transporter protein;protein_id=YP_405919.1;transl_table=11
NC_007606.1	RefSeq	gene	4278138	4279142	.	-	.	ID=gene4499;Dbxref=GeneID:3795659;Name=dppF;Note=SDY4563;gbkey=Gene;gene=dppF;gene_biotype=protein_coding;locus_tag=SDY_4563
NC_007606.1	RefSeq	CDS	4278138	4279142	.	-	0	ID=cds3979;Parent=gene4499;Dbxref=Genbank:YP_405920.1,GeneID:3795659;Name=YP_405920.1;Note=Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides;gbkey=CDS;gene=dppF;product=dipeptide ABC transporter ATP-binding protein;protein_id=YP_405920.1;transl_table=11
NC_007606.1	RefSeq	gene	4279139	4280122	.	-	.	ID=gene4500;Dbxref=GeneID:3795660;Name=dppD;Note=SDY4564;gbkey=Gene;gene=dppD;gene_biotype=protein_coding;locus_tag=SDY_4564
NC_007606.1	RefSeq	CDS	4279139	4280122	.	-	0	ID=cds3980;Parent=gene4500;Dbxref=Genbank:YP_405921.1,GeneID:3795660;Name=YP_405921.1;Note=DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF;gbkey=CDS;gene=dppD;product=dipeptide ABC transporter ATP-binding protein;protein_id=YP_405921.1;transl_table=11
NC_007606.1	RefSeq	gene	4280133	4281035	.	-	.	ID=gene4501;Dbxref=GeneID:3795661;Name=dppC;Note=SDY4565;gbkey=Gene;gene=dppC;gene_biotype=protein_coding;locus_tag=SDY_4565
NC_007606.1	RefSeq	CDS	4280133	4281035	.	-	0	ID=cds3981;Parent=gene4501;Dbxref=Genbank:YP_405922.1,GeneID:3795661;Name=YP_405922.1;Note=Code: EP%3B COG: COG1173;gbkey=CDS;gene=dppC;product=dipeptide transporter;protein_id=YP_405922.1;transl_table=11
NC_007606.1	RefSeq	gene	4281045	4282064	.	-	.	ID=gene4502;Dbxref=GeneID:3795662;Name=dppB;Note=SDY4566;gbkey=Gene;gene=dppB;gene_biotype=protein_coding;locus_tag=SDY_4566
NC_007606.1	RefSeq	CDS	4281045	4282064	.	-	0	ID=cds3982;Parent=gene4502;Dbxref=Genbank:YP_405923.1,GeneID:3795662;Name=YP_405923.1;Note=transports peptides consisting of two or three amino acids;gbkey=CDS;gene=dppB;product=dipeptide transporter permease DppB;protein_id=YP_405923.1;transl_table=11
NC_007606.1	RefSeq	gene	4282215	4283822	.	-	.	ID=gene4503;Dbxref=GeneID:3795663;Name=dppA;Note=SDY4567;gbkey=Gene;gene=dppA;gene_biotype=protein_coding;locus_tag=SDY_4567
NC_007606.1	RefSeq	CDS	4282215	4283822	.	-	0	ID=cds3983;Parent=gene4503;Dbxref=Genbank:YP_405924.1,GeneID:3795663;Name=YP_405924.1;Note=Code: E%3B COG: COG0747;gbkey=CDS;gene=dppA;product=dipeptide transport protein;protein_id=YP_405924.1;transl_table=11
NC_007606.1	RefSeq	gene	4284566	4284642	.	-	.	ID=gene4504;Dbxref=GeneID:3795664;Name=SDY_4568;Note=SDY4568;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_4568
NC_007606.1	RefSeq	tRNA	4284566	4284642	.	-	.	ID=rna102;Parent=gene4504;Dbxref=GeneID:3795664;codons=23;gbkey=tRNA;product=tRNA-Pro
NC_007606.1	RefSeq	exon	4284566	4284642	.	-	.	ID=id714;Parent=rna102;Dbxref=GeneID:3795664;codons=23;gbkey=tRNA;product=tRNA-Pro
NC_007606.1	RefSeq	gene	4284734	4285312	.	-	.	ID=gene4505;Dbxref=GeneID:3795665;Name=yhjW;Note=''SDY4569%3B truncated%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yhjW;gene_biotype=pseudogene;locus_tag=SDY_4569;pseudo=true
NC_007606.1	RefSeq	region	4285351	4285579	.	+	.	ID=id715;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4285579	4286790	.	-	.	ID=gene4506;Dbxref=GeneID:3795666;Name=SDY_4570;Note=SDY4570;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4570
NC_007606.1	RefSeq	CDS	4285579	4286790	.	-	0	ID=cds3984;Parent=gene4506;Dbxref=Genbank:YP_405925.1,GeneID:3795666;Name=YP_405925.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405925.1;transl_table=11
NC_007606.1	RefSeq	region	4286791	4288121	.	-	.	ID=id716;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4286802	4287707	.	-	.	ID=gene4507;Dbxref=GeneID:3795667;Name=SDY_4571;Note=SDY4571;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4571
NC_007606.1	RefSeq	CDS	4286802	4287707	.	-	0	ID=cds3985;Parent=gene4507;Dbxref=Genbank:YP_405926.2,GeneID:3795667;Name=YP_405926.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_405926.2;transl_table=11
NC_007606.1	RefSeq	gene	4287665	4288030	.	-	.	ID=gene4508;Dbxref=GeneID:3795668;Name=SDY_4572;Note=SDY4572;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4572
NC_007606.1	RefSeq	CDS	4287665	4288030	.	-	0	ID=cds3986;Parent=gene4508;Dbxref=Genbank:YP_405927.1,GeneID:3795668;Name=YP_405927.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_405927.1;transl_table=11
NC_007606.1	RefSeq	region	4288125	4289205	.	+	.	ID=id717;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4288450	4289163	.	+	.	ID=gene4509;Dbxref=GeneID:3795670;Name=SDY_4574;Note=SDY4574;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4574
NC_007606.1	RefSeq	CDS	4288450	4289163	.	+	0	ID=cds3987;Parent=gene4509;Dbxref=Genbank:YP_405929.1,GeneID:3795670;Name=YP_405929.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_405929.1;transl_table=11
NC_007606.1	RefSeq	gene	4289201	4290844	.	-	.	ID=gene4510;Dbxref=GeneID:3795577;Name=SDY_4575;Note=''SDY4575%3B truncated%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4575;pseudo=true
NC_007606.1	RefSeq	gene	4290854	4292059	.	-	.	ID=gene4511;Dbxref=GeneID:3795580;Name=yicJ;Note=SDY4578;gbkey=Gene;gene=yicJ;gene_biotype=pseudogene;locus_tag=SDY_4578;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	4292062	4292832	.	-	.	ID=id718;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4292076	4292471	.	-	.	ID=gene4512;Dbxref=GeneID:3795578;Name=SDY_4576;Note=SDY4576;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4576
NC_007606.1	RefSeq	CDS	4292076	4292471	.	-	0	ID=cds3988;Parent=gene4512;Dbxref=Genbank:YP_405930.1,GeneID:3795578;Name=YP_405930.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405930.1;transl_table=11
NC_007606.1	RefSeq	gene	4292498	4292770	.	-	.	ID=gene4513;Dbxref=GeneID:18263202;Name=SDY_4813;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4813
NC_007606.1	RefSeq	CDS	4292498	4292770	.	-	0	ID=cds3989;Parent=gene4513;Dbxref=Genbank:YP_009000890.1,GeneID:18263202;Name=YP_009000890.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000890.1;transl_table=11
NC_007606.1	RefSeq	gene	4293303	4293397	.	+	.	ID=gene4514;Dbxref=GeneID:3795581;Name=SDY_4579;Note=SDY4579;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_4579
NC_007606.1	RefSeq	tRNA	4293303	4293397	.	+	.	ID=rna103;Parent=gene4514;Dbxref=GeneID:3795581;codons=14;gbkey=tRNA;product=tRNA-Sec
NC_007606.1	RefSeq	exon	4293303	4293397	.	+	.	ID=id719;Parent=rna103;Dbxref=GeneID:3795581;codons=14;gbkey=tRNA;product=tRNA-Sec
NC_007606.1	RefSeq	gene	4293697	4294050	.	+	.	ID=gene4515;Dbxref=GeneID:3795582;Name=SDY_4580;Note=SDY4580;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4580
NC_007606.1	RefSeq	CDS	4293697	4294050	.	+	0	ID=cds3990;Parent=gene4515;Dbxref=Genbank:YP_405932.1,GeneID:3795582;Name=YP_405932.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405932.1;transl_table=11
NC_007606.1	RefSeq	region	4294064	4294831	.	+	.	ID=id720;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4294119	4294394	.	+	.	ID=gene4516;Dbxref=GeneID:3795310;Name=SDY_4581;Note=SDY4581;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4581
NC_007606.1	RefSeq	CDS	4294119	4294394	.	+	0	ID=cds3991;Parent=gene4516;Dbxref=Genbank:YP_405933.1,GeneID:3795310;Name=YP_405933.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;product=insertion element iso-IS1d protein InsA;protein_id=YP_405933.1;transl_table=11
NC_007606.1	RefSeq	gene	4294439	4294816	.	+	.	ID=gene4517;Dbxref=GeneID:3795311;Name=SDY_4582;Note=SDY4582;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4582
NC_007606.1	RefSeq	CDS	4294439	4294816	.	+	0	ID=cds3992;Parent=gene4517;Dbxref=Genbank:YP_405934.1,GeneID:3795311;Name=YP_405934.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1d protein InsB;protein_id=YP_405934.1;transl_table=11
NC_007606.1	RefSeq	region	4294883	4296213	.	+	.	ID=id721;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4294974	4295339	.	+	.	ID=gene4518;Dbxref=GeneID:3795584;Name=SDY_4584;Note=SDY4584;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4584
NC_007606.1	RefSeq	CDS	4294974	4295339	.	+	0	ID=cds3993;Parent=gene4518;Dbxref=Genbank:YP_405936.1,GeneID:3795584;Name=YP_405936.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence element IS2 repressor TnpA;protein_id=YP_405936.1;transl_table=11
NC_007606.1	RefSeq	gene	4295297	4296202	.	+	.	ID=gene4519;Dbxref=GeneID:3795585;Name=SDY_4585;Note=SDY4585;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4585
NC_007606.1	RefSeq	CDS	4295297	4296202	.	+	0	ID=cds3994;Parent=gene4519;Dbxref=Genbank:YP_405937.2,GeneID:3795585;Name=YP_405937.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_405937.2;transl_table=11
NC_007606.1	RefSeq	region	4296214	4297060	.	+	.	ID=id722;Note=fragment;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4296302	4297066	.	+	.	ID=gene4520;Dbxref=GeneID:3795586;Name=SDY_4586;Note=SDY4586;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4586
NC_007606.1	RefSeq	CDS	4296302	4297066	.	+	0	ID=cds3995;Parent=gene4520;Dbxref=Genbank:YP_405938.1,GeneID:3795586;Name=YP_405938.1;Note=Code: L%3B COG: COG2801;gbkey=CDS;product=insertion sequence element IS600 integrase core domain-containing protein;protein_id=YP_405938.1;transl_table=11
NC_007606.1	RefSeq	gene	4297123	4298583	.	+	.	ID=gene4521;Dbxref=GeneID:3795587;Name=flu;Note=''SDY4587%3B truncated or new adhesin%3B original product: outer membrane fluffing protein%2C similar to adhesin'';gbkey=Gene;gene=flu;gene_biotype=pseudogene;locus_tag=SDY_4587;pseudo=true
NC_007606.1	RefSeq	gene	4298967	4299787	.	+	.	ID=gene4522;Dbxref=GeneID:3795588;Name=SDY_4588;Note=SDY4588;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4588;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	4300128	4300601	.	+	.	ID=gene4523;Dbxref=GeneID:3795589;Name=SDY_4589;Note=SDY4589;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4589
NC_007606.1	RefSeq	CDS	4300128	4300601	.	+	0	ID=cds3996;Parent=gene4523;Dbxref=Genbank:YP_405940.1,GeneID:3795589;Name=YP_405940.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405940.1;transl_table=11
NC_007606.1	RefSeq	gene	4300617	4301093	.	+	.	ID=gene4524;Dbxref=GeneID:3795590;Name=SDY_4590;Note=SDY4590;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4590
NC_007606.1	RefSeq	CDS	4300617	4301093	.	+	0	ID=cds3997;Parent=gene4524;Dbxref=Genbank:YP_405941.1,GeneID:3795590;Name=YP_405941.1;Note=Code: L%3B COG: COG2003;gbkey=CDS;product=DNA repair protein;protein_id=YP_405941.1;transl_table=11
NC_007606.1	RefSeq	gene	4301162	4301383	.	+	.	ID=gene4525;Dbxref=GeneID:3795591;Name=SDY_4591;Note=SDY4591;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4591
NC_007606.1	RefSeq	CDS	4301162	4301383	.	+	0	ID=cds3998;Parent=gene4525;Dbxref=Genbank:YP_405942.1,GeneID:3795591;Name=YP_405942.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405942.1;transl_table=11
NC_007606.1	RefSeq	gene	4301546	4301914	.	+	.	ID=gene4526;Dbxref=GeneID:18263203;Name=SDY_4591a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4591a
NC_007606.1	RefSeq	CDS	4301546	4301914	.	+	0	ID=cds3999;Parent=gene4526;Dbxref=Genbank:YP_009000891.1,GeneID:18263203;Name=YP_009000891.1;gbkey=CDS;product=cytoskeleton bundling-enhancing factor A;protein_id=YP_009000891.1;transl_table=11
NC_007606.1	RefSeq	gene	4302375	4302866	.	+	.	ID=gene4527;Dbxref=GeneID:3795592;Name=SDY_4592;Note=SDY4592;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4592
NC_007606.1	RefSeq	CDS	4302375	4302866	.	+	0	ID=cds4000;Parent=gene4527;Dbxref=Genbank:YP_405943.1,GeneID:3795592;Name=YP_405943.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405943.1;transl_table=11
NC_007606.1	RefSeq	region	4303933	4304697	.	+	.	ID=id723;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4303990	4304262	.	+	.	ID=gene4528;Dbxref=GeneID:18263204;Name=SDY_4814;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4814
NC_007606.1	RefSeq	CDS	4303990	4304262	.	+	0	ID=cds4001;Parent=gene4528;Dbxref=Genbank:YP_009000892.1,GeneID:18263204;Name=YP_009000892.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000892.1;transl_table=11
NC_007606.1	RefSeq	gene	4304805	4305062	.	-	.	ID=gene4529;Dbxref=GeneID:3795595;Name=SDY_4595;Note=SDY4595;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4595
NC_007606.1	RefSeq	CDS	4304805	4305062	.	-	0	ID=cds4002;Parent=gene4529;Dbxref=Genbank:YP_405946.1,GeneID:3795595;Name=YP_405946.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_405946.1;transl_table=11
NC_007606.1	RefSeq	gene	4305059	4305832	.	-	.	ID=gene4530;Dbxref=GeneID:3795314;Name=yjiL;Note=SDY4596;gbkey=Gene;gene=yjiL;gene_biotype=protein_coding;locus_tag=SDY_4596
NC_007606.1	RefSeq	CDS	4305059	4305832	.	-	0	ID=cds4003;Parent=gene4530;Dbxref=Genbank:YP_405947.1,GeneID:3795314;Name=YP_405947.1;Note=activator of (R)-hydroxyglutaryl-CoA dehydratase;gbkey=CDS;gene=yjiL;product=ATPase;protein_id=YP_405947.1;transl_table=11
NC_007606.1	RefSeq	gene	4305836	4306988	.	-	.	ID=gene4531;Dbxref=GeneID:3795315;Name=SDY_4597;Note=''SDY4597%3B frameshift%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4597;pseudo=true
NC_007606.1	RefSeq	gene	4307104	4308383	.	-	.	ID=gene4532;Dbxref=GeneID:3795316;Name=yjiN;Note=''SDY4598%3B frameshift%3B original product: orf%2C hypothetical protein%3B orf'';gbkey=Gene;gene=yjiN;gene_biotype=pseudogene;locus_tag=SDY_4598;pseudo=true
NC_007606.1	RefSeq	gene	4308424	4309656	.	-	.	ID=gene4533;Dbxref=GeneID:3795317;Name=yjiO;Note=SDY4599;gbkey=Gene;gene=yjiO;gene_biotype=protein_coding;locus_tag=SDY_4599
NC_007606.1	RefSeq	CDS	4308424	4309656	.	-	0	ID=cds4004;Parent=gene4533;Dbxref=Genbank:YP_405948.1,GeneID:3795317;Name=YP_405948.1;Note=Code: GEPR%3B COG: COG0477;gbkey=CDS;gene=yjiO;product=transport protein;protein_id=YP_405948.1;transl_table=11
NC_007606.1	RefSeq	gene	4310123	4311067	.	+	.	ID=gene4534;Dbxref=GeneID:3795318;Name=SDY_4600;Note=SDY4600;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4600
NC_007606.1	RefSeq	CDS	4310123	4311067	.	+	0	ID=cds4005;Parent=gene4534;Dbxref=Genbank:YP_405949.1,GeneID:3795318;Name=YP_405949.1;Note=Code: S%3B COG: COG5464;gbkey=CDS;product=hypothetical protein;protein_id=YP_405949.1;transl_table=11
NC_007606.1	RefSeq	gene	4311310	4312722	.	-	.	ID=gene4535;Dbxref=GeneID:3795319;Name=yjiR;Note=SDY4601;gbkey=Gene;gene=yjiR;gene_biotype=protein_coding;locus_tag=SDY_4601
NC_007606.1	RefSeq	CDS	4311310	4312722	.	-	0	ID=cds4006;Parent=gene4535;Dbxref=Genbank:YP_405950.1,GeneID:3795319;Name=YP_405950.1;Note=Code: KE%3B COG: COG1167;gbkey=CDS;gene=yjiR;product=regulator;protein_id=YP_405950.1;transl_table=11
NC_007606.1	RefSeq	gene	4312899	4313063	.	+	.	ID=gene4536;Dbxref=GeneID:3795320;Name=yjiS;Note=SDY4602;gbkey=Gene;gene=yjiS;gene_biotype=protein_coding;locus_tag=SDY_4602
NC_007606.1	RefSeq	CDS	4312899	4313063	.	+	0	ID=cds4007;Parent=gene4536;Dbxref=Genbank:YP_405951.1,GeneID:3795320;Name=YP_405951.1;Note=Code: S%3B COG: COG5457;gbkey=CDS;gene=yjiS;product=hypothetical protein;protein_id=YP_405951.1;transl_table=11
NC_007606.1	RefSeq	region	4313351	4314116	.	-	.	ID=id724;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4313365	4313760	.	-	.	ID=gene4537;Dbxref=GeneID:3795322;Name=SDY_4604;Note=SDY4604;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4604
NC_007606.1	RefSeq	CDS	4313365	4313760	.	-	0	ID=cds4008;Parent=gene4537;Dbxref=Genbank:YP_405953.1,GeneID:3795322;Name=YP_405953.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405953.1;transl_table=11
NC_007606.1	RefSeq	gene	4313787	4314059	.	-	.	ID=gene4538;Dbxref=GeneID:18263205;Name=SDY_4815;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4815
NC_007606.1	RefSeq	CDS	4313787	4314059	.	-	0	ID=cds4009;Parent=gene4538;Dbxref=Genbank:YP_009000893.1,GeneID:18263205;Name=YP_009000893.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000893.1;transl_table=11
NC_007606.1	RefSeq	gene	4314122	4314976	.	-	.	ID=gene4539;Dbxref=GeneID:3795323;Name=yjiA;Note=SDY4605;gbkey=Gene;gene=yjiA;gene_biotype=protein_coding;locus_tag=SDY_4605
NC_007606.1	RefSeq	CDS	4314122	4314976	.	-	0	ID=cds4010;Parent=gene4539;Dbxref=Genbank:YP_405954.1,GeneID:3795323;Name=YP_405954.1;Note=Code: R%3B COG: COG0523;gbkey=CDS;gene=yjiA;product=GTP-binding protein YjiA;protein_id=YP_405954.1;transl_table=11
NC_007606.1	RefSeq	gene	4315089	4315292	.	-	.	ID=gene4540;Dbxref=GeneID:3795324;Name=yjiX;Note=SDY4606;gbkey=Gene;gene=yjiX;gene_biotype=protein_coding;locus_tag=SDY_4606
NC_007606.1	RefSeq	CDS	4315089	4315292	.	-	0	ID=cds4011;Parent=gene4540;Dbxref=Genbank:YP_405955.1,GeneID:3795324;Name=YP_405955.1;Note=Code: S%3B COG: COG2879;gbkey=CDS;gene=yjiX;product=hypothetical protein;protein_id=YP_405955.1;transl_table=11
NC_007606.1	RefSeq	gene	4315423	4317588	.	-	.	ID=gene4541;Dbxref=GeneID:3795325;Name=yjiY;Note=SDY4607;gbkey=Gene;gene=yjiY;gene_biotype=protein_coding;locus_tag=SDY_4607
NC_007606.1	RefSeq	CDS	4315423	4317588	.	-	0	ID=cds4012;Parent=gene4541;Dbxref=Genbank:YP_405956.1,GeneID:3795325;Name=YP_405956.1;Note=Code: T%3B COG: COG1966;gbkey=CDS;gene=yjiY;product=carbon starvation protein;protein_id=YP_405956.1;transl_table=11
NC_007606.1	RefSeq	gene	4317950	4319604	.	+	.	ID=gene4542;Dbxref=GeneID:3795326;Name=tsr;Note=''SDY4608%3B frameshift%3B original product: methyl-accepting chemotaxis protein I%2C serine sensor receptor'';gbkey=Gene;gene=tsr;gene_biotype=pseudogene;locus_tag=SDY_4608;pseudo=true
NC_007606.1	RefSeq	region	4319996	4321259	.	+	.	ID=id725;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4320060	4320362	.	+	.	ID=gene4543;Dbxref=GeneID:3795327;Name=SDY_4609;Note=SDY4609;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4609
NC_007606.1	RefSeq	CDS	4320060	4320362	.	+	0	ID=cds4013;Parent=gene4543;Dbxref=Genbank:YP_405957.1,GeneID:3795327;Name=YP_405957.1;Note=Code: L%3B COG: COG2963;gbkey=CDS;product=insertion sequence element IS600 transposase;protein_id=YP_405957.1;transl_table=11
NC_007606.1	RefSeq	gene	4320503	4321340	.	+	.	ID=gene4544;Dbxref=GeneID:3795328;Name=SDY_4610;Note=SDY4610;gbkey=Gene;gene_biotype=pseudogene;locus_tag=SDY_4610;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	gene	4321723	4322118	.	+	.	ID=gene4545;Dbxref=GeneID:3795330;Name=yjjN;Note=SDY4612%3B truncated%3B original product:  oxidoreductase;gbkey=Gene;gene=yjjN;gene_biotype=pseudogene;locus_tag=SDY_4612;pseudo=true
NC_007606.1	RefSeq	gene	4322255	4324546	.	-	.	ID=gene4546;Dbxref=GeneID:3795331;Name=mdoB;Note=SDY4613;gbkey=Gene;gene=mdoB;gene_biotype=protein_coding;locus_tag=SDY_4613
NC_007606.1	RefSeq	CDS	4322255	4324546	.	-	0	ID=cds4014;Parent=gene4546;Dbxref=Genbank:YP_405959.2,GeneID:3795331;Name=YP_405959.2;Note=catalyzes the transfer of phosphoglycerol to the glucan backbone;gbkey=CDS;gene=mdoB;product=phosphoglycerol transferase I;protein_id=YP_405959.2;transl_table=11
NC_007606.1	RefSeq	gene	4324800	4325297	.	-	.	ID=gene4547;Dbxref=GeneID:3795332;Name=yjjA;Note=SDY4614;gbkey=Gene;gene=yjjA;gene_biotype=protein_coding;locus_tag=SDY_4614
NC_007606.1	RefSeq	CDS	4324800	4325297	.	-	0	ID=cds4015;Parent=gene4547;Dbxref=Genbank:YP_405960.1,GeneID:3795332;Name=YP_405960.1;gbkey=CDS;gene=yjjA;product=hypothetical protein;protein_id=YP_405960.1;transl_table=11
NC_007606.1	RefSeq	gene	4325343	4326080	.	-	.	ID=gene4548;Dbxref=GeneID:3795372;Name=dnaC;Note=SDY4615;gbkey=Gene;gene=dnaC;gene_biotype=protein_coding;locus_tag=SDY_4615
NC_007606.1	RefSeq	CDS	4325343	4326080	.	-	0	ID=cds4016;Parent=gene4548;Dbxref=Genbank:YP_405961.1,GeneID:3795372;Name=YP_405961.1;Note=acts to load the DnaB helicase onto the initiation site during DNA replication;gbkey=CDS;gene=dnaC;product=DNA replication protein DnaC;protein_id=YP_405961.1;transl_table=11
NC_007606.1	RefSeq	gene	4326083	4326622	.	-	.	ID=gene4549;Dbxref=GeneID:3795373;Name=dnaT;Note=SDY4616;gbkey=Gene;gene=dnaT;gene_biotype=protein_coding;locus_tag=SDY_4616
NC_007606.1	RefSeq	CDS	4326083	4326622	.	-	0	ID=cds4017;Parent=gene4549;Dbxref=Genbank:YP_405962.1,GeneID:3795373;Name=YP_405962.1;Note=''This protein is required for primosome-dependent normal DNA replication%3B it is also involved in inducing stable DNA replication during SOS response. It forms%2C in concert with dnaB protein and other prepriming proteins dnaC%2C N%2C N'%2C N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N''';gbkey=CDS;gene=dnaT;product=primosomal protein DnaI;protein_id=YP_405962.1;transl_table=11
NC_007606.1	RefSeq	gene	4326729	4327202	.	-	.	ID=gene4550;Dbxref=GeneID:3795374;Name=yjjB;Note=SDY4617;gbkey=Gene;gene=yjjB;gene_biotype=protein_coding;locus_tag=SDY_4617
NC_007606.1	RefSeq	CDS	4326729	4327202	.	-	0	ID=cds4018;Parent=gene4550;Dbxref=Genbank:YP_405963.2,GeneID:3795374;Name=YP_405963.2;Note=Code: S%3B COG: COG3610;gbkey=CDS;gene=yjjB;product=hypothetical protein;protein_id=YP_405963.2;transl_table=11
NC_007606.1	RefSeq	gene	4327193	4328903	.	-	.	ID=gene4551;Dbxref=GeneID:3795375;Name=yjjP;Note=SDY4620;gbkey=Gene;gene=yjjP;gene_biotype=pseudogene;locus_tag=SDY_4620;pseudo=true;pseudogene=unknown
NC_007606.1	RefSeq	region	4327954	4328721	.	+	.	ID=id726;gbkey=mobile_element;gene=yjjP
NC_007606.1	RefSeq	gene	4328009	4328284	.	+	.	ID=gene4552;Dbxref=GeneID:3795312;Name=SDY_4618;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4618;pseudogene=unknown
NC_007606.1	RefSeq	CDS	4328009	4328284	.	+	0	ID=cds4019;Parent=gene4552;Dbxref=Genbank:YP_405964.1,GeneID:3795312;Name=YP_405964.1;Note=Code: L%3B COG: COG3677;gbkey=CDS;product=insertion element IS1 protein InsA;protein_id=YP_405964.1;transl_table=11
NC_007606.1	RefSeq	gene	4328329	4328706	.	+	.	ID=gene4553;Dbxref=GeneID:3795313;Name=SDY_4619;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4619;pseudogene=unknown
NC_007606.1	RefSeq	CDS	4328329	4328706	.	+	0	ID=cds4020;Parent=gene4553;Dbxref=Genbank:YP_405965.1,GeneID:3795313;Name=YP_405965.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1d protein InsB;protein_id=YP_405965.1;transl_table=11
NC_007606.1	RefSeq	region	4329054	4329822	.	-	.	ID=id727;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4329068	4329463	.	-	.	ID=gene4554;Dbxref=GeneID:3795376;Name=SDY_4621;Note=SDY4621;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4621
NC_007606.1	RefSeq	CDS	4329068	4329463	.	-	0	ID=cds4021;Parent=gene4554;Dbxref=Genbank:YP_405966.1,GeneID:3795376;Name=YP_405966.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405966.1;transl_table=11
NC_007606.1	RefSeq	gene	4329490	4329762	.	-	.	ID=gene4555;Dbxref=GeneID:18263206;Name=SDY_4816;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4816
NC_007606.1	RefSeq	CDS	4329490	4329762	.	-	0	ID=cds4022;Parent=gene4555;Dbxref=Genbank:YP_009000894.1,GeneID:18263206;Name=YP_009000894.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000894.1;transl_table=11
NC_007606.1	RefSeq	region	4330382	4331147	.	+	.	ID=id728;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4330439	4330735	.	+	.	ID=gene4556;Dbxref=GeneID:18263207;Name=SDY_4817;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4817
NC_007606.1	RefSeq	CDS	4330439	4330735	.	+	0	ID=cds4023;Parent=gene4556;Dbxref=Genbank:YP_009000895.1,GeneID:18263207;Name=YP_009000895.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000895.1;transl_table=11
NC_007606.1	RefSeq	gene	4330737	4331132	.	+	.	ID=gene4557;Dbxref=GeneID:3795378;Name=SDY_4623;Note=SDY4623;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4623
NC_007606.1	RefSeq	CDS	4330737	4331132	.	+	0	ID=cds4024;Parent=gene4557;Dbxref=Genbank:YP_405967.1,GeneID:3795378;Name=YP_405967.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405967.1;transl_table=11
NC_007606.1	RefSeq	gene	4331589	4332266	.	+	.	ID=gene4558;Dbxref=GeneID:3795379;Name=bglJ;Note=SDY4624%3B contains in-frame stop codon%3B original product: 2-component transcriptional regulator;gbkey=Gene;gene=bglJ;gene_biotype=pseudogene;locus_tag=SDY_4624;pseudo=true
NC_007606.1	RefSeq	gene	4332304	4333092	.	-	.	ID=gene4559;Dbxref=GeneID:3795380;Name=fhuF;Note=SDY4625;gbkey=Gene;gene=fhuF;gene_biotype=protein_coding;locus_tag=SDY_4625
NC_007606.1	RefSeq	CDS	4332304	4333092	.	-	0	ID=cds4025;Parent=gene4559;Dbxref=Genbank:YP_405968.1,GeneID:3795380;Name=YP_405968.1;Note=Code: R%3B COG: COG4114;gbkey=CDS;gene=fhuF;product=ferric hydroximate transport ferric iron reductase;protein_id=YP_405968.1;transl_table=11
NC_007606.1	RefSeq	gene	4333233	4333469	.	+	.	ID=gene4560;Dbxref=GeneID:3795381;Name=SDY_4626;Note=SDY4626;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4626
NC_007606.1	RefSeq	CDS	4333233	4333469	.	+	0	ID=cds4026;Parent=gene4560;Dbxref=Genbank:YP_405969.2,GeneID:3795381;Name=YP_405969.2;gbkey=CDS;product=hypothetical protein;protein_id=YP_405969.2;transl_table=11
NC_007606.1	RefSeq	gene	4333508	4333594	.	-	.	ID=gene4561;Dbxref=GeneID:3795382;Name=SDY_4627;Note=SDY4627;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_4627
NC_007606.1	RefSeq	tRNA	4333508	4333594	.	-	.	ID=rna104;Parent=gene4561;Dbxref=GeneID:3795382;codons=19;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	exon	4333508	4333594	.	-	.	ID=id729;Parent=rna104;Dbxref=GeneID:3795382;codons=19;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	gene	4333629	4333716	.	-	.	ID=gene4562;Dbxref=GeneID:3795383;Name=SDY_4628;Note=SDY4628;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_4628
NC_007606.1	RefSeq	tRNA	4333629	4333716	.	-	.	ID=rna105;Parent=gene4562;Dbxref=GeneID:3795383;codons=19;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	exon	4333629	4333716	.	-	.	ID=id730;Parent=rna105;Dbxref=GeneID:3795383;codons=19;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	gene	4333745	4333831	.	-	.	ID=gene4563;Dbxref=GeneID:3795384;Name=SDY_4629;Note=SDY4629;gbkey=Gene;gene_biotype=tRNA;locus_tag=SDY_4629
NC_007606.1	RefSeq	tRNA	4333745	4333831	.	-	.	ID=rna106;Parent=gene4563;Dbxref=GeneID:3795384;codons=19;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	exon	4333745	4333831	.	-	.	ID=id731;Parent=rna106;Dbxref=GeneID:3795384;codons=19;gbkey=tRNA;product=tRNA-Leu
NC_007606.1	RefSeq	gene	4334031	4335062	.	-	.	ID=gene4564;Dbxref=GeneID:3795385;Name=rsmC;Note=SDY4630;gbkey=Gene;gene=rsmC;gene_biotype=protein_coding;locus_tag=SDY_4630
NC_007606.1	RefSeq	CDS	4334031	4335062	.	-	0	ID=cds4027;Parent=gene4564;Dbxref=Genbank:YP_405970.1,GeneID:3795385;Name=YP_405970.1;Note=16S rRNA M2G1207 methyltransferase%3B one of many enzymes that modify bases of the ribosomal RNA%3B this enzyme methylates the G at position 1207 of the small ribosomal subunit;gbkey=CDS;gene=rsmC;product=16S ribosomal RNA m2G1207 methyltransferase;protein_id=YP_405970.1;transl_table=11
NC_007606.1	RefSeq	gene	4335165	4335578	.	+	.	ID=gene4565;Dbxref=GeneID:3795386;Name=holD;Note=SDY4631;gbkey=Gene;gene=holD;gene_biotype=protein_coding;locus_tag=SDY_4631
NC_007606.1	RefSeq	CDS	4335165	4335578	.	+	0	ID=cds4028;Parent=gene4565;Dbxref=Genbank:YP_405971.1,GeneID:3795386;Name=YP_405971.1;Note=with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB;gbkey=CDS;gene=holD;product=DNA polymerase III subunit psi;protein_id=YP_405971.1;transl_table=11
NC_007606.1	RefSeq	gene	4335547	4335993	.	+	.	ID=gene4566;Dbxref=GeneID:3795387;Name=rimI;Note=SDY4632;gbkey=Gene;gene=rimI;gene_biotype=protein_coding;locus_tag=SDY_4632
NC_007606.1	RefSeq	CDS	4335547	4335993	.	+	0	ID=cds4029;Parent=gene4566;Dbxref=Genbank:YP_405972.1,GeneID:3795387;Name=YP_405972.1;Note=alanine acetyltransferase that specifically acetylates ribosomal protein S18;gbkey=CDS;gene=rimI;product=ribosomal-protein-alanine N-acetyltransferase;protein_id=YP_405972.1;transl_table=11
NC_007606.1	RefSeq	gene	4336008	4336685	.	+	.	ID=gene4567;Dbxref=GeneID:3795333;Name=yjjG;Note=SDY4633;gbkey=Gene;gene=yjjG;gene_biotype=protein_coding;locus_tag=SDY_4633
NC_007606.1	RefSeq	CDS	4336008	4336685	.	+	0	ID=cds4030;Parent=gene4567;Dbxref=Genbank:YP_405973.1,GeneID:3795333;Name=YP_405973.1;Note=''manganese-dependent 5'-nucleotidase%3B specific for 5'-UMP%2C 5'-dUMP%2C and 5'-dTMP%3B member of haloacid dehalogenase (HAD)-like hydrolase superfamily'';gbkey=CDS;gene=yjjG;product=nucleotidase;protein_id=YP_405973.1;transl_table=11
NC_007606.1	RefSeq	gene	4336776	4338365	.	+	.	ID=gene4568;Dbxref=GeneID:3795334;Name=prfC;Note=SDY4634;gbkey=Gene;gene=prfC;gene_biotype=protein_coding;locus_tag=SDY_4634
NC_007606.1	RefSeq	CDS	4336776	4338365	.	+	0	ID=cds4031;Parent=gene4568;Dbxref=Genbank:YP_405974.1,GeneID:3795334;Name=YP_405974.1;Note=stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred%3B GDP/GTP-binding protein;gbkey=CDS;gene=prfC;product=peptide chain release factor 3;protein_id=YP_405974.1;transl_table=11
NC_007606.1	RefSeq	region	4338427	4339192	.	+	.	ID=id732;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4338484	4338756	.	+	.	ID=gene4569;Dbxref=GeneID:18263208;Name=SDY_4818;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4818
NC_007606.1	RefSeq	CDS	4338484	4338756	.	+	0	ID=cds4032;Parent=gene4569;Dbxref=Genbank:YP_009000896.1,GeneID:18263208;Name=YP_009000896.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000896.1;transl_table=11
NC_007606.1	RefSeq	gene	4338783	4339178	.	+	.	ID=gene4570;Dbxref=GeneID:3795335;Name=SDY_4635;Note=SDY4635;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4635
NC_007606.1	RefSeq	CDS	4338783	4339178	.	+	0	ID=cds4033;Parent=gene4570;Dbxref=Genbank:YP_405975.1,GeneID:3795335;Name=YP_405975.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element iso-IS1n protein InsB;protein_id=YP_405975.1;transl_table=11
NC_007606.1	RefSeq	gene	4339532	4340137	.	+	.	ID=gene4571;Dbxref=GeneID:3795336;Name=osmY;Note=SDY4636;gbkey=Gene;gene=osmY;gene_biotype=protein_coding;locus_tag=SDY_4636
NC_007606.1	RefSeq	CDS	4339532	4340137	.	+	0	ID=cds4034;Parent=gene4571;Dbxref=Genbank:YP_405976.1,GeneID:3795336;Name=YP_405976.1;Note=Code: R%3B COG: COG2823;gbkey=CDS;gene=osmY;product=hypothetical protein;protein_id=YP_405976.1;transl_table=11
NC_007606.1	RefSeq	gene	4340264	4340425	.	+	.	ID=gene4572;Dbxref=GeneID:18263209;Name=SDY_4636a;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4636a
NC_007606.1	RefSeq	CDS	4340264	4340425	.	+	0	ID=cds4035;Parent=gene4572;Dbxref=Genbank:YP_009000897.1,GeneID:18263209;Name=YP_009000897.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_009000897.1;transl_table=11
NC_007606.1	RefSeq	gene	4340547	4341620	.	+	.	ID=gene4573;Dbxref=GeneID:3795337;Name=yjjU;Note=SDY4637;gbkey=Gene;gene=yjjU;gene_biotype=protein_coding;locus_tag=SDY_4637
NC_007606.1	RefSeq	CDS	4340547	4341620	.	+	0	ID=cds4036;Parent=gene4573;Dbxref=Genbank:YP_405977.1,GeneID:3795337;Name=YP_405977.1;Note=Code: R%3B COG: COG4667;gbkey=CDS;gene=yjjU;product=hypothetical protein;protein_id=YP_405977.1;transl_table=11
NC_007606.1	RefSeq	gene	4341617	4342399	.	+	.	ID=gene4574;Dbxref=GeneID:3795338;Name=yjjV;Note=SDY4638;gbkey=Gene;gene=yjjV;gene_biotype=protein_coding;locus_tag=SDY_4638
NC_007606.1	RefSeq	CDS	4341617	4342399	.	+	0	ID=cds4037;Parent=gene4574;Dbxref=Genbank:YP_405978.1,GeneID:3795338;Name=YP_405978.1;Note=Code: L%3B COG: COG0084;gbkey=CDS;gene=yjjV;product=deoxyribonuclease YjjV;protein_id=YP_405978.1;transl_table=11
NC_007606.1	RefSeq	gene	4342612	4343475	.	-	.	ID=gene4575;Dbxref=GeneID:3795339;Name=yjjW;Note=SDY4639;gbkey=Gene;gene=yjjW;gene_biotype=protein_coding;locus_tag=SDY_4639
NC_007606.1	RefSeq	CDS	4342612	4343475	.	-	0	ID=cds4038;Parent=gene4575;Dbxref=Genbank:YP_405979.1,GeneID:3795339;Name=YP_405979.1;Note=Code: O%3B COG: COG1180;gbkey=CDS;gene=yjjW;product=activating enzyme;protein_id=YP_405979.1;transl_table=11
NC_007606.1	RefSeq	gene	4343447	4344997	.	-	.	ID=gene4576;Dbxref=GeneID:3795340;Name=yjjI;Note=SDY4640;gbkey=Gene;gene=yjjI;gene_biotype=protein_coding;locus_tag=SDY_4640
NC_007606.1	RefSeq	CDS	4343447	4344997	.	-	0	ID=cds4039;Parent=gene4576;Dbxref=Genbank:YP_405980.1,GeneID:3795340;Name=YP_405980.1;gbkey=CDS;gene=yjjI;product=hypothetical protein;protein_id=YP_405980.1;transl_table=11
NC_007606.1	RefSeq	gene	4345255	4346034	.	+	.	ID=gene4577;Dbxref=GeneID:3795341;Name=deoC;Note=SDY4641;gbkey=Gene;gene=deoC;gene_biotype=protein_coding;locus_tag=SDY_4641
NC_007606.1	RefSeq	CDS	4345255	4346034	.	+	0	ID=cds4040;Parent=gene4577;Dbxref=Genbank:YP_405981.1,GeneID:3795341;Name=YP_405981.1;Note=catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate;gbkey=CDS;gene=deoC;product=deoxyribose-phosphate aldolase;protein_id=YP_405981.1;transl_table=11
NC_007606.1	RefSeq	gene	4346161	4347483	.	+	.	ID=gene4578;Dbxref=GeneID:3795342;Name=deoA;Note=SDY4642;gbkey=Gene;gene=deoA;gene_biotype=protein_coding;locus_tag=SDY_4642
NC_007606.1	RefSeq	CDS	4346161	4347483	.	+	0	ID=cds4041;Parent=gene4578;Dbxref=Genbank:YP_405982.1,GeneID:3795342;Name=YP_405982.1;Note=''Catalyzes the reversible phosphorolysis of thymidine%2C deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate'';gbkey=CDS;gene=deoA;product=thymidine phosphorylase;protein_id=YP_405982.1;transl_table=11
NC_007606.1	RefSeq	gene	4347535	4348758	.	+	.	ID=gene4579;Dbxref=GeneID:3795343;Name=deoB;Note=SDY4643;gbkey=Gene;gene=deoB;gene_biotype=protein_coding;locus_tag=SDY_4643
NC_007606.1	RefSeq	CDS	4347535	4348758	.	+	0	ID=cds4042;Parent=gene4579;Dbxref=Genbank:YP_405983.1,GeneID:3795343;Name=YP_405983.1;Note=catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose;gbkey=CDS;gene=deoB;product=phosphopentomutase;protein_id=YP_405983.1;transl_table=11
NC_007606.1	RefSeq	gene	4348838	4349557	.	+	.	ID=gene4580;Dbxref=GeneID:3795344;Name=deoD;Note=SDY4644;gbkey=Gene;gene=deoD;gene_biotype=protein_coding;locus_tag=SDY_4644
NC_007606.1	RefSeq	CDS	4348838	4349557	.	+	0	ID=cds4043;Parent=gene4580;Dbxref=Genbank:YP_405984.1,GeneID:3795344;Name=YP_405984.1;Note=catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate;gbkey=CDS;gene=deoD;product=purine nucleoside phosphorylase;protein_id=YP_405984.1;transl_table=11
NC_007606.1	RefSeq	region	4349703	4350468	.	+	.	ID=id733;gbkey=mobile_element
NC_007606.1	RefSeq	gene	4349760	4350032	.	+	.	ID=gene4581;Dbxref=GeneID:18263210;Name=SDY_4819;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4819
NC_007606.1	RefSeq	CDS	4349760	4350032	.	+	0	ID=cds4044;Parent=gene4581;Dbxref=Genbank:YP_009000898.1,GeneID:18263210;Name=YP_009000898.1;gbkey=CDS;product=insertion element iso-IS1N protein InsA;protein_id=YP_009000898.1;transl_table=11
NC_007606.1	RefSeq	gene	4350059	4350454	.	+	.	ID=gene4582;Dbxref=GeneID:3795345;Name=SDY_4645;Note=SDY4645;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4645
NC_007606.1	RefSeq	CDS	4350059	4350454	.	+	0	ID=cds4045;Parent=gene4582;Dbxref=Genbank:YP_405985.1,GeneID:3795345;Name=YP_405985.1;Note=Code: L%3B COG: COG1662;gbkey=CDS;product=insertion element IS1 protein InsB;protein_id=YP_405985.1;transl_table=11
NC_007606.1	RefSeq	gene	4350492	4350755	.	-	.	ID=gene4583;Dbxref=GeneID:3795346;Name=SDY_4646;Note=SDY4646;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_4646
NC_007606.1	RefSeq	CDS	4350492	4350755	.	-	0	ID=cds4046;Parent=gene4583;Dbxref=Genbank:YP_405986.1,GeneID:3795346;Name=YP_405986.1;Note=Code: K%3B COG: COG1396;gbkey=CDS;product=hypothetical protein;protein_id=YP_405986.1;transl_table=11
NC_007606.1	RefSeq	gene	4350787	4351803	.	-	.	ID=gene4584;Dbxref=GeneID:3795347;Name=lplA;Note=SDY4647;gbkey=Gene;gene=lplA;gene_biotype=protein_coding;locus_tag=SDY_4647
NC_007606.1	RefSeq	CDS	4350787	4351803	.	-	0	ID=cds4047;Parent=gene4584;Dbxref=Genbank:YP_405987.1,GeneID:3795347;Name=YP_405987.1;Note=Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins;gbkey=CDS;gene=lplA;product=lipoate-protein ligase A;protein_id=YP_405987.1;transl_table=11
NC_007606.1	RefSeq	gene	4351831	4352475	.	-	.	ID=gene4585;Dbxref=GeneID:3795348;Name=smp;Note=SDY4648;gbkey=Gene;gene=smp;gene_biotype=protein_coding;locus_tag=SDY_4648
NC_007606.1	RefSeq	CDS	4351831	4352475	.	-	0	ID=cds4048;Parent=gene4585;Dbxref=Genbank:YP_405988.1,GeneID:3795348;Name=YP_405988.1;Note=Code: R%3B COG: COG3726;gbkey=CDS;gene=smp;product=hypothetical protein;protein_id=YP_405988.1;transl_table=11
NC_007606.1	RefSeq	gene	4352581	4353549	.	+	.	ID=gene4586;Dbxref=GeneID:3795349;Name=serB;Note=SDY4649;gbkey=Gene;gene=serB;gene_biotype=protein_coding;locus_tag=SDY_4649
NC_007606.1	RefSeq	CDS	4352581	4353549	.	+	0	ID=cds4049;Parent=gene4586;Dbxref=Genbank:YP_405989.1,GeneID:3795349;Name=YP_405989.1;Note=catalyzes the formation of serine from O-phosphoserine;gbkey=CDS;gene=serB;product=phosphoserine phosphatase;protein_id=YP_405989.1;transl_table=11
NC_007606.1	RefSeq	gene	4353598	4354980	.	+	.	ID=gene4587;Dbxref=GeneID:3795350;Name=sms;Note=SDY4650;gbkey=Gene;gene=sms;gene_biotype=protein_coding;locus_tag=SDY_4650
NC_007606.1	RefSeq	CDS	4353598	4354980	.	+	0	ID=cds4050;Parent=gene4587;Dbxref=Genbank:YP_405990.1,GeneID:3795350;Name=YP_405990.1;Note=Sms%3B stabilizes the strand-invasion intermediate during the DNA repair%3B involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents;gbkey=CDS;gene=sms;product=DNA repair protein RadA;protein_id=YP_405990.1;transl_table=11
NC_007606.1	RefSeq	gene	4355001	4356233	.	+	.	ID=gene4588;Dbxref=GeneID:3795351;Name=nadR;Note=SDY4651;gbkey=Gene;gene=nadR;gene_biotype=protein_coding;locus_tag=SDY_4651
NC_007606.1	RefSeq	CDS	4355001	4356233	.	+	0	ID=cds4051;Parent=gene4588;Dbxref=Genbank:YP_405991.2,GeneID:3795351;Name=YP_405991.2;Note=catalyzes the formation of NAD(+) from nicotinamide ribonucleotide;gbkey=CDS;gene=nadR;product=nicotinamide-nucleotide adenylyltransferase;protein_id=YP_405991.2;transl_table=11
NC_007606.1	RefSeq	gene	4356540	4358207	.	-	.	ID=gene4589;Dbxref=GeneID:3795352;Name=yjjK;Note=SDY4652;gbkey=Gene;gene=yjjK;gene_biotype=protein_coding;locus_tag=SDY_4652
NC_007606.1	RefSeq	CDS	4356540	4358207	.	-	0	ID=cds4052;Parent=gene4589;Dbxref=Genbank:YP_405992.1,GeneID:3795352;Name=YP_405992.1;Note=''ChvD%3B in Agrobacterium tumefaciens%2C mutations in both Walker boxes were found to affect virulence'';gbkey=CDS;gene=yjjK;product=ABC transporter ATP-binding protein;protein_id=YP_405992.1;transl_table=11
NC_007606.1	RefSeq	gene	4358418	4360355	.	+	.	ID=gene4590;Dbxref=GeneID:3795296;Name=slt;Note=SDY4653;gbkey=Gene;gene=slt;gene_biotype=protein_coding;locus_tag=SDY_4653
NC_007606.1	RefSeq	CDS	4358418	4360355	.	+	0	ID=cds4053;Parent=gene4590;Dbxref=Genbank:YP_405993.2,GeneID:3795296;Name=YP_405993.2;Note=catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan;gbkey=CDS;gene=slt;product=lytic murein transglycosylase;protein_id=YP_405993.2;transl_table=11
NC_007606.1	RefSeq	gene	4360445	4360771	.	+	.	ID=gene4591;Dbxref=GeneID:3795297;Name=trpR;Note=SDY4654;gbkey=Gene;gene=trpR;gene_biotype=protein_coding;locus_tag=SDY_4654
NC_007606.1	RefSeq	CDS	4360445	4360771	.	+	0	ID=cds4054;Parent=gene4591;Dbxref=Genbank:YP_405994.1,GeneID:3795297;Name=YP_405994.1;Note=When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription;gbkey=CDS;gene=trpR;product=Trp operon repressor;protein_id=YP_405994.1;transl_table=11
NC_007606.1	RefSeq	gene	4360814	4361326	.	-	.	ID=gene4592;Dbxref=GeneID:3795298;Name=yjjX;Note=SDY4655;gbkey=Gene;gene=yjjX;gene_biotype=protein_coding;locus_tag=SDY_4655
NC_007606.1	RefSeq	CDS	4360814	4361326	.	-	0	ID=cds4055;Parent=gene4592;Dbxref=Genbank:YP_405995.2,GeneID:3795298;Name=YP_405995.2;Note=pyrophosphatase%3B has activity against dUTP and dITP%3B the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226%3B in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms%3B in Escherichia coli overexpression of this gene leads to resistance to an HMP analog;gbkey=CDS;gene=yjjX;product=NTPase;protein_id=YP_405995.2;transl_table=11
NC_007606.1	RefSeq	gene	4361378	4362025	.	+	.	ID=gene4593;Dbxref=GeneID:3795299;Name=gpmB;Note=SDY4656;gbkey=Gene;gene=gpmB;gene_biotype=protein_coding;locus_tag=SDY_4656
NC_007606.1	RefSeq	CDS	4361378	4362025	.	+	0	ID=cds4056;Parent=gene4593;Dbxref=Genbank:YP_405996.1,GeneID:3795299;Name=YP_405996.1;Note=catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate;gbkey=CDS;gene=gpmB;product=phosphoglycerate mutase;protein_id=YP_405996.1;transl_table=11
NC_007606.1	RefSeq	gene	4362022	4362891	.	-	.	ID=gene4594;Dbxref=GeneID:3795300;Name=rob;Note=SDY4657;gbkey=Gene;gene=rob;gene_biotype=protein_coding;locus_tag=SDY_4657
NC_007606.1	RefSeq	CDS	4362022	4362891	.	-	0	ID=cds4057;Parent=gene4594;Dbxref=Genbank:YP_405997.1,GeneID:3795300;Name=YP_405997.1;Note=Code: K%3B COG: COG2207;gbkey=CDS;gene=rob;product=right origin-binding protein;protein_id=YP_405997.1;transl_table=11
NC_007606.1	RefSeq	gene	4363102	4363575	.	+	.	ID=gene4595;Dbxref=GeneID:3795301;Name=creA;Note=SDY4658;gbkey=Gene;gene=creA;gene_biotype=protein_coding;locus_tag=SDY_4658
NC_007606.1	RefSeq	CDS	4363102	4363575	.	+	0	ID=cds4058;Parent=gene4595;Dbxref=Genbank:YP_405998.1,GeneID:3795301;Name=YP_405998.1;Note=Code: S%3B COG: COG3045;gbkey=CDS;gene=creA;product=hypothetical protein;protein_id=YP_405998.1;transl_table=11
NC_007606.1	RefSeq	gene	4363588	4364277	.	+	.	ID=gene4596;Dbxref=GeneID:3795302;Name=creB;Note=SDY4659;gbkey=Gene;gene=creB;gene_biotype=protein_coding;locus_tag=SDY_4659
NC_007606.1	RefSeq	CDS	4363588	4364277	.	+	0	ID=cds4059;Parent=gene4596;Dbxref=Genbank:YP_405999.1,GeneID:3795302;Name=YP_405999.1;Note=response regulator in two-component regulatory system with CreC%3B CreB protein is phosphorylated by sensor protein phospho-CreC%3B involved in catabolic regulation;gbkey=CDS;gene=creB;product=DNA-binding response regulator CreB;protein_id=YP_405999.1;transl_table=11
NC_007606.1	RefSeq	gene	4364277	4365701	.	+	.	ID=gene4597;Dbxref=GeneID:3795303;Name=creC;Note=SDY4660%3B contains in-frame stop codon%3B original product: catabolite repression sensor kinase for PhoB%3B alternative sensor for pho regulon;gbkey=Gene;gene=creC;gene_biotype=pseudogene;locus_tag=SDY_4660;pseudo=true
NC_007606.1	RefSeq	gene	4365759	4367110	.	+	.	ID=gene4598;Dbxref=GeneID:3795304;Name=creD;Note=SDY4661%3B frameshift%3B original product: tolerance to colicin E2;gbkey=Gene;gene=creD;gene_biotype=pseudogene;locus_tag=SDY_4661;pseudo=true
NC_007606.1	RefSeq	gene	4367170	4367886	.	-	.	ID=gene4599;Dbxref=GeneID:3795305;Name=arcA;Note=SDY4662;gbkey=Gene;gene=arcA;gene_biotype=protein_coding;locus_tag=SDY_4662
NC_007606.1	RefSeq	CDS	4367170	4367886	.	-	0	ID=cds4060;Parent=gene4599;Dbxref=Genbank:YP_406000.1,GeneID:3795305;Name=YP_406000.1;Note=Code: TK%3B COG: COG0745;gbkey=CDS;gene=arcA;product=two-component response regulator;protein_id=YP_406000.1;transl_table=11
NC_007606.1	RefSeq	gene	4367982	4368122	.	+	.	ID=gene4600;Dbxref=GeneID:3795306;Name=yjjY;Note=SDY4663;gbkey=Gene;gene=yjjY;gene_biotype=protein_coding;locus_tag=SDY_4663
NC_007606.1	RefSeq	CDS	4367982	4368122	.	+	0	ID=cds4061;Parent=gene4600;Dbxref=Genbank:YP_406001.1,GeneID:3795306;Name=YP_406001.1;gbkey=CDS;gene=yjjY;product=hypothetical protein;protein_id=YP_406001.1;transl_table=11
NC_007606.1	RefSeq	gene	4368522	4369208	.	+	.	ID=gene4601;Dbxref=GeneID:3795307;Name=lasT;Note=SDY4664;gbkey=Gene;gene=lasT;gene_biotype=protein_coding;locus_tag=SDY_4664
NC_007606.1	RefSeq	CDS	4368522	4369208	.	+	0	ID=cds4062;Parent=gene4601;Dbxref=Genbank:YP_406002.1,GeneID:3795307;Name=YP_406002.1;Note=member of the SPOUT superfamily of methyltransferases;gbkey=CDS;gene=lasT;product=RNA methyltransferase;protein_id=YP_406002.1;transl_table=11
##sequence-region NC_009344.1 1 8953
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=300267
NC_009344.1	RefSeq	region	1	8953	.	+	.	ID=id734;Dbxref=taxon:300267;Is_circular=true;Name=pSD197_spA;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pSD197_spA;serotype=1;strain=Sd197
NC_009344.1	RefSeq	gene	741	1697	.	+	.	ID=gene4602;Dbxref=GeneID:4991496;Name=repA;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=SDY_PA01
NC_009344.1	RefSeq	CDS	741	1697	.	+	0	ID=cds4063;Parent=gene4602;Dbxref=Genbank:YP_001139944.1,GeneID:4991496;Name=YP_001139944.1;gbkey=CDS;gene=repA;product=hypothetical protein;protein_id=YP_001139944.1;transl_table=11
NC_009344.1	RefSeq	gene	2073	2348	.	+	.	ID=gene4603;Dbxref=GeneID:4991497;Name=insA;gbkey=Gene;gene=insA;gene_biotype=protein_coding;locus_tag=SDY_PA02
NC_009344.1	RefSeq	CDS	2073	2348	.	+	0	ID=cds4064;Parent=gene4603;Dbxref=Genbank:YP_001139945.1,GeneID:4991497;Name=YP_001139945.1;gbkey=CDS;gene=insA;product=hypothetical protein;protein_id=YP_001139945.1;transl_table=11
NC_009344.1	RefSeq	gene	2393	2770	.	+	.	ID=gene4604;Dbxref=GeneID:4991498;Name=insB;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_PA03
NC_009344.1	RefSeq	CDS	2393	2770	.	+	0	ID=cds4065;Parent=gene4604;Dbxref=Genbank:YP_001139946.1,GeneID:4991498;Name=YP_001139946.1;gbkey=CDS;gene=insB;product=hypothetical protein;protein_id=YP_001139946.1;transl_table=11
NC_009344.1	RefSeq	gene	2979	4112	.	-	.	ID=gene4605;Dbxref=GeneID:4991499;Name=rfpB;gbkey=Gene;gene=rfpB;gene_biotype=protein_coding;locus_tag=SDY_PA04
NC_009344.1	RefSeq	CDS	2979	4112	.	-	0	ID=cds4066;Parent=gene4605;Dbxref=Genbank:YP_001139947.1,GeneID:4991499;Name=YP_001139947.1;gbkey=CDS;gene=rfpB;product=RfpB;protein_id=YP_001139947.1;transl_table=11
NC_009344.1	RefSeq	gene	4330	4920	.	-	.	ID=gene4606;Dbxref=GeneID:4991500;Name=rfpA;gbkey=Gene;gene=rfpA;gene_biotype=protein_coding;locus_tag=SDY_PA05
NC_009344.1	RefSeq	CDS	4330	4920	.	-	0	ID=cds4067;Parent=gene4606;Dbxref=Genbank:YP_001139948.1,GeneID:4991500;Name=YP_001139948.1;gbkey=CDS;gene=rfpA;product=RfpA;protein_id=YP_001139948.1;transl_table=11
NC_009344.1	RefSeq	gene	5327	6097	.	-	.	ID=gene4607;Dbxref=GeneID:4991501;Name=SDY_PA06;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_PA06
NC_009344.1	RefSeq	CDS	5327	6097	.	-	0	ID=cds4068;Parent=gene4607;Dbxref=Genbank:YP_001139949.1,GeneID:4991501;Name=YP_001139949.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_001139949.1;transl_table=11
NC_009344.1	RefSeq	gene	7225	7497	.	+	.	ID=gene4608;Dbxref=GeneID:4991502;Name=SDY_PA07;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_PA07
NC_009344.1	RefSeq	CDS	7225	7497	.	+	0	ID=cds4069;Parent=gene4608;Dbxref=Genbank:YP_001139950.1,GeneID:4991502;Name=YP_001139950.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_001139950.1;transl_table=11
NC_009344.1	RefSeq	gene	7478	8686	.	+	.	ID=gene4609;Dbxref=GeneID:4991503;Name=SDY_PA08;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_PA08
NC_009344.1	RefSeq	CDS	7478	8686	.	+	0	ID=cds4070;Parent=gene4609;Dbxref=Genbank:YP_001139951.1,GeneID:4991503;Name=YP_001139951.1;gbkey=CDS;product=IS1294 transposase;protein_id=YP_001139951.1;transl_table=11
##sequence-region NC_007607.1 1 182726
##species http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=300267
NC_007607.1	RefSeq	region	1	182726	.	+	.	ID=id735;Dbxref=taxon:300267;Is_circular=true;Name=pSD1_197;gbkey=Src;genome=plasmid;mol_type=genomic DNA;plasmid-name=pSD1_197;serotype=1;strain=Sd197
NC_007607.1	RefSeq	gene	191	367	.	-	.	ID=gene4610;Dbxref=GeneID:3776545;Name=SDY_P002;Note=SDYP002;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P002
NC_007607.1	RefSeq	CDS	191	367	.	-	0	ID=cds4071;Parent=gene4610;Dbxref=Genbank:YP_406003.1,GeneID:3776545;Name=YP_406003.1;gbkey=CDS;product=IS2 ORF2;protein_id=YP_406003.1;transl_table=11
NC_007607.1	RefSeq	region	246	438	.	-	.	ID=id736;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	359	823	.	+	.	ID=gene4611;Dbxref=GeneID:3776544;Name=SDY_P001;Note=SDYP001;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P001
NC_007607.1	RefSeq	CDS	359	823	.	+	0	ID=cds4072;Parent=gene4611;Dbxref=Genbank:YP_406004.1,GeneID:3776544;Name=YP_406004.1;gbkey=CDS;product=putative resolvase%2C fragment;protein_id=YP_406004.1;transl_table=11
NC_007607.1	RefSeq	gene	1233	1916	.	+	.	ID=gene4612;Dbxref=GeneID:3776546;Name=ospB;Note=SDYP003;gbkey=Gene;gene=ospB;gene_biotype=protein_coding;locus_tag=SDY_P003
NC_007607.1	RefSeq	CDS	1233	1916	.	+	0	ID=cds4073;Parent=gene4612;Dbxref=Genbank:YP_406005.1,GeneID:3776546;Name=YP_406005.1;gbkey=CDS;gene=ospB;product=OspB;protein_id=YP_406005.1;transl_table=11
NC_007607.1	RefSeq	gene	2244	2984	.	+	.	ID=gene4613;Dbxref=GeneID:3776547;Name=phoN2/apy;Note=SDYP004;gbkey=Gene;gene=phoN2/apy;gene_biotype=protein_coding;locus_tag=SDY_P004
NC_007607.1	RefSeq	CDS	2244	2984	.	+	0	ID=cds4074;Parent=gene4613;Dbxref=Genbank:YP_406006.1,GeneID:3776547;Name=YP_406006.1;gbkey=CDS;gene=phoN2/apy;product=PhoN2/Apy;protein_id=YP_406006.1;transl_table=11
NC_007607.1	RefSeq	region	3079	3208	.	+	.	ID=id737;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	3363	5147	.	-	.	ID=gene4614;Dbxref=GeneID:3776549;Name=ospC4;Note=SDYP006%3B contains iso-IS1 insertion%3B original product: OspC4%2C probably secreted by the Mxi-Spa secretion machinery;gbkey=Gene;gene=ospC4;gene_biotype=pseudogene;locus_tag=SDY_P006;pseudo=true
NC_007607.1	RefSeq	region	4303	5072	.	+	.	ID=id738;gbkey=mobile_element;gene=ospC4
NC_007607.1	RefSeq	gene	4663	5058	.	+	.	ID=gene4615;Dbxref=GeneID:3776548;Name=SDY_P005;Note=SDYP005;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P005
NC_007607.1	RefSeq	CDS	4663	5058	.	+	0	ID=cds4075;Parent=gene4615;Dbxref=Genbank:YP_406007.1,GeneID:3776548;Name=YP_406007.1;gbkey=CDS;product=iso-IS1 ORF2;protein_id=YP_406007.1;transl_table=11
NC_007607.1	RefSeq	gene	5493	5894	.	-	.	ID=gene4616;Dbxref=GeneID:3776550;Name=SDY_P007;Note=SDYP007;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P007
NC_007607.1	RefSeq	CDS	5493	5894	.	-	0	ID=cds4076;Parent=gene4616;Dbxref=Genbank:YP_406008.1,GeneID:3776550;Name=YP_406008.1;gbkey=CDS;product=ISEc8 orf%2C fragment;protein_id=YP_406008.1;transl_table=11
NC_007607.1	RefSeq	region	5589	5720	.	+	.	ID=id739;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	5974	6396	.	-	.	ID=gene4617;Dbxref=GeneID:3776551;Name=SDY_P008;Note=SDYP008;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P008
NC_007607.1	RefSeq	CDS	5974	6396	.	-	0	ID=cds4077;Parent=gene4617;Dbxref=Genbank:YP_406009.1,GeneID:3776551;Name=YP_406009.1;gbkey=CDS;product=IS600 ORF2;protein_id=YP_406009.1;transl_table=11
NC_007607.1	RefSeq	region	6056	6798	.	-	.	ID=id740;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	6432	6734	.	-	.	ID=gene4618;Dbxref=GeneID:3776552;Name=SDY_P009;Note=SDYP009;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P009
NC_007607.1	RefSeq	CDS	6432	6734	.	-	0	ID=cds4078;Parent=gene4618;Dbxref=Genbank:YP_406010.1,GeneID:3776552;Name=YP_406010.1;gbkey=CDS;product=IS600 ORF1;protein_id=YP_406010.1;transl_table=11
NC_007607.1	RefSeq	gene	7424	9142	.	-	.	ID=gene4619;Dbxref=GeneID:3776553;Name=ospD2;Note=SDYP010;gbkey=Gene;gene=ospD2;gene_biotype=protein_coding;locus_tag=SDY_P010
NC_007607.1	RefSeq	CDS	7424	9142	.	-	0	ID=cds4079;Parent=gene4619;Dbxref=Genbank:YP_406011.1,GeneID:3776553;Name=YP_406011.1;gbkey=CDS;gene=ospD2;product=OspD2;protein_id=YP_406011.1;transl_table=11
NC_007607.1	RefSeq	region	9488	10817	.	-	.	ID=id741;gbkey=mobile_element
NC_007607.1	RefSeq	gene	9498	10403	.	-	.	ID=gene4620;Dbxref=GeneID:3776554;Name=SDY_P011;Note=SDYP011;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P011
NC_007607.1	RefSeq	CDS	9498	10403	.	-	0	ID=cds4080;Parent=gene4620;Dbxref=Genbank:YP_406012.2,GeneID:3776554;Name=YP_406012.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_406012.2;transl_table=11
NC_007607.1	RefSeq	gene	10361	10726	.	-	.	ID=gene4621;Dbxref=GeneID:3776555;Name=SDY_P012;Note=SDYP012;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P012
NC_007607.1	RefSeq	CDS	10361	10726	.	-	0	ID=cds4081;Parent=gene4621;Dbxref=Genbank:YP_406013.1,GeneID:3776555;Name=YP_406013.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence 2 OrfA protein;protein_id=YP_406013.1;transl_table=11
NC_007607.1	RefSeq	gene	10901	11620	.	-	.	ID=gene4622;Dbxref=GeneID:3776469;Name=ospF;Note=SDYP013;gbkey=Gene;gene=ospF;gene_biotype=protein_coding;locus_tag=SDY_P013
NC_007607.1	RefSeq	CDS	10901	11620	.	-	0	ID=cds4082;Parent=gene4622;Dbxref=Genbank:YP_406014.1,GeneID:3776469;Name=YP_406014.1;Note=secreted by the Mxi-Spa secretion machinery;gbkey=CDS;gene=ospF;product=OspF;protein_id=YP_406014.1;transl_table=11
NC_007607.1	RefSeq	gene	11826	12203	.	-	.	ID=gene4623;Dbxref=GeneID:3776470;Name=SDY_P014;Note=SDYP014;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P014
NC_007607.1	RefSeq	CDS	11826	12203	.	-	0	ID=cds4083;Parent=gene4623;Dbxref=Genbank:YP_406015.1,GeneID:3776470;Name=YP_406015.1;gbkey=CDS;product=putative transposase;protein_id=YP_406015.1;transl_table=11
NC_007607.1	RefSeq	gene	12740	13318	.	-	.	ID=gene4624;Dbxref=GeneID:3776471;Name=SDY_P015;Note=SDYP015;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P015
NC_007607.1	RefSeq	CDS	12740	13318	.	-	0	ID=cds4084;Parent=gene4624;Dbxref=Genbank:YP_406016.1,GeneID:3776471;Name=YP_406016.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406016.1;transl_table=11
NC_007607.1	RefSeq	region	13364	13588	.	-	.	ID=id742;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	13547	13666	.	-	.	ID=gene4625;Dbxref=GeneID:3776472;Name=SDY_P016;Note=SDYP016;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P016
NC_007607.1	RefSeq	CDS	13547	13666	.	-	0	ID=cds4085;Parent=gene4625;Dbxref=Genbank:YP_406017.1,GeneID:3776472;Name=YP_406017.1;gbkey=CDS;product=IS3 orf2%2C fragment;protein_id=YP_406017.1;transl_table=11
NC_007607.1	RefSeq	region	13717	13980	.	-	.	ID=id743;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	region	13980	14579	.	-	.	ID=id744;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	14289	14690	.	-	.	ID=gene4626;Dbxref=GeneID:3776474;Name=SDY_P018;Note=SDYP018;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P018
NC_007607.1	RefSeq	CDS	14289	14690	.	-	0	ID=cds4086;Parent=gene4626;Dbxref=Genbank:YP_406018.1,GeneID:3776474;Name=YP_406018.1;gbkey=CDS;product=IS91 orf;protein_id=YP_406018.1;transl_table=11
NC_007607.1	RefSeq	region	14576	14908	.	-	.	ID=id745;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	14675	14962	.	+	.	ID=gene4627;Dbxref=GeneID:3776473;Name=SDY_P017;Note=SDYP017;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P017
NC_007607.1	RefSeq	CDS	14675	14962	.	+	0	ID=cds4087;Parent=gene4627;Dbxref=Genbank:YP_406019.1,GeneID:3776473;Name=YP_406019.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406019.1;transl_table=11
NC_007607.1	RefSeq	gene	15233	15640	.	+	.	ID=gene4628;Dbxref=GeneID:3776475;Name=SDY_P019;Note=SDYP019;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P019
NC_007607.1	RefSeq	CDS	15233	15640	.	+	0	ID=cds4088;Parent=gene4628;Dbxref=Genbank:YP_406020.1,GeneID:3776475;Name=YP_406020.1;gbkey=CDS;product=putative IS orf%2C fragment;protein_id=YP_406020.1;transl_table=11
NC_007607.1	RefSeq	gene	15640	15987	.	+	.	ID=gene4629;Dbxref=GeneID:3776476;Name=SDY_P020;Note=SDYP020;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P020
NC_007607.1	RefSeq	CDS	15640	15987	.	+	0	ID=cds4089;Parent=gene4629;Dbxref=Genbank:YP_406021.1,GeneID:3776476;Name=YP_406021.1;gbkey=CDS;product=ISSfl4 ORF2;protein_id=YP_406021.1;transl_table=11
NC_007607.1	RefSeq	region	15685	15992	.	-	.	ID=id746;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	16115	17314	.	+	.	ID=gene4630;Dbxref=GeneID:3776477;Name=SDY_P021;Note=SDYP021;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P021
NC_007607.1	RefSeq	CDS	16115	17314	.	+	0	ID=cds4090;Parent=gene4630;Dbxref=Genbank:YP_406022.1,GeneID:3776477;Name=YP_406022.1;gbkey=CDS;product=putative IS orf%2C fragment;protein_id=YP_406022.1;transl_table=11
NC_007607.1	RefSeq	region	16442	16678	.	-	.	ID=id747;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	region	16762	17064	.	+	.	ID=id748;Dbxref=GeneID:3776477;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	region	17238	17435	.	+	.	ID=id749;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	18083	18289	.	+	.	ID=gene4631;Dbxref=GeneID:3776478;Name=SDY_P022;Note=SDYP022;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P022
NC_007607.1	RefSeq	CDS	18083	18289	.	+	0	ID=cds4091;Parent=gene4631;Dbxref=Genbank:YP_406023.1,GeneID:3776478;Name=YP_406023.1;gbkey=CDS;product=putative transposase%2C fragment;protein_id=YP_406023.1;transl_table=11
NC_007607.1	RefSeq	region	18371	18529	.	+	.	ID=id750;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	18877	19554	.	+	.	ID=gene4632;Dbxref=GeneID:3776479;Name=ospD1;Note=SDYP023;gbkey=Gene;gene=ospD1;gene_biotype=protein_coding;locus_tag=SDY_P023
NC_007607.1	RefSeq	CDS	18877	19554	.	+	0	ID=cds4092;Parent=gene4632;Dbxref=Genbank:YP_406024.1,GeneID:3776479;Name=YP_406024.1;gbkey=CDS;gene=ospD1;product=OspD1;protein_id=YP_406024.1;transl_table=11
NC_007607.1	RefSeq	region	19890	20018	.	+	.	ID=id751;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	20036	20260	.	-	.	ID=gene4633;Dbxref=GeneID:3776480;Name=SDY_P024;Note=SDYP024;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P024
NC_007607.1	RefSeq	CDS	20036	20260	.	-	0	ID=cds4093;Parent=gene4633;Dbxref=Genbank:YP_406025.1,GeneID:3776480;Name=YP_406025.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406025.1;transl_table=11
NC_007607.1	RefSeq	gene	20653	21228	.	+	.	ID=gene4634;Dbxref=GeneID:3776481;Name=ipgB2;Note=SDYP025;gbkey=Gene;gene=ipgB2;gene_biotype=protein_coding;locus_tag=SDY_P025
NC_007607.1	RefSeq	CDS	20653	21228	.	+	0	ID=cds4094;Parent=gene4634;Dbxref=Genbank:YP_406026.1,GeneID:3776481;Name=YP_406026.1;gbkey=CDS;gene=ipgB2;product=IpgB2;protein_id=YP_406026.1;transl_table=11
NC_007607.1	RefSeq	region	21735	22995	.	+	.	ID=id752;gbkey=mobile_element
NC_007607.1	RefSeq	gene	21800	22099	.	+	.	ID=gene4635;Dbxref=GeneID:3776482;Name=SDY_P026;Note=SDYP026;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P026
NC_007607.1	RefSeq	CDS	21800	22099	.	+	0	ID=cds4095;Parent=gene4635;Dbxref=Genbank:YP_406027.1,GeneID:3776482;Name=YP_406027.1;gbkey=CDS;product=IS3 ORF1;protein_id=YP_406027.1;transl_table=11
NC_007607.1	RefSeq	gene	22096	22965	.	+	.	ID=gene4636;Dbxref=GeneID:3776483;Name=SDY_P027;Note=SDYP027;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P027
NC_007607.1	RefSeq	CDS	22096	22965	.	+	0	ID=cds4096;Parent=gene4636;Dbxref=Genbank:YP_406028.1,GeneID:3776483;Name=YP_406028.1;gbkey=CDS;product=IS3 ORF2;protein_id=YP_406028.1;transl_table=11
NC_007607.1	RefSeq	region	23253	23668	.	+	.	ID=id753;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	23305	23577	.	+	.	ID=gene4637;Dbxref=GeneID:3776484;Name=SDY_P028;Note=SDYP028;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P028
NC_007607.1	RefSeq	CDS	23305	23577	.	+	0	ID=cds4097;Parent=gene4637;Dbxref=Genbank:YP_406029.1,GeneID:3776484;Name=YP_406029.1;gbkey=CDS;product=iso-IS1 ORF1;protein_id=YP_406029.1;transl_table=11
NC_007607.1	RefSeq	region	23667	25608	.	+	.	ID=id754;gbkey=mobile_element
NC_007607.1	RefSeq	gene	23820	24908	.	+	.	ID=gene4638;Dbxref=GeneID:3776485;Name=SDY_P029;Note=SDYP029;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P029
NC_007607.1	RefSeq	CDS	23820	24908	.	+	0	ID=cds4098;Parent=gene4638;Dbxref=Genbank:YP_406030.1,GeneID:3776485;Name=YP_406030.1;gbkey=CDS;product=IS100 ORF1;protein_id=YP_406030.1;transl_table=11
NC_007607.1	RefSeq	gene	24880	25521	.	+	.	ID=gene4639;Dbxref=GeneID:3776486;Name=SDY_P030;Note=SDYP030;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P030
NC_007607.1	RefSeq	CDS	24880	25521	.	+	0	ID=cds4099;Parent=gene4639;Dbxref=Genbank:YP_406031.1,GeneID:3776486;Name=YP_406031.1;gbkey=CDS;product=transposase/IS protein;protein_id=YP_406031.1;transl_table=11
NC_007607.1	RefSeq	region	25608	25955	.	+	.	ID=id755;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	region	25960	26095	.	+	.	ID=id756;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	26268	27467	.	+	.	ID=gene4640;Dbxref=GeneID:3776487;Name=parA;Note=SDYP031;gbkey=Gene;gene=parA;gene_biotype=protein_coding;locus_tag=SDY_P031
NC_007607.1	RefSeq	CDS	26268	27467	.	+	0	ID=cds4100;Parent=gene4640;Dbxref=Genbank:YP_406032.1,GeneID:3776487;Name=YP_406032.1;gbkey=CDS;gene=parA;product=plasmid segregation protein;protein_id=YP_406032.1;transl_table=11
NC_007607.1	RefSeq	gene	27467	28447	.	+	.	ID=gene4641;Dbxref=GeneID:3776631;Name=parB;Note=SDYP032;gbkey=Gene;gene=parB;gene_biotype=protein_coding;locus_tag=SDY_P032
NC_007607.1	RefSeq	CDS	27467	28447	.	+	0	ID=cds4101;Parent=gene4641;Dbxref=Genbank:YP_406033.1,GeneID:3776631;Name=YP_406033.1;gbkey=CDS;gene=parB;product=plasmid segregation protein;protein_id=YP_406033.1;transl_table=11
NC_007607.1	RefSeq	gene	28703	29188	.	+	.	ID=gene4642;Dbxref=GeneID:3776632;Name=SDY_P033;Note=SDYP033;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P033
NC_007607.1	RefSeq	CDS	28703	29188	.	+	0	ID=cds4102;Parent=gene4642;Dbxref=Genbank:YP_406034.1,GeneID:3776632;Name=YP_406034.1;gbkey=CDS;product=putative transposase%2C fragment;protein_id=YP_406034.1;transl_table=11
NC_007607.1	RefSeq	gene	29477	30604	.	-	.	ID=gene4643;Dbxref=GeneID:3776633;Name=SDY_P034;Note=SDYP034;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P034
NC_007607.1	RefSeq	CDS	29477	30604	.	-	0	ID=cds4103;Parent=gene4643;Dbxref=Genbank:YP_406035.1,GeneID:3776633;Name=YP_406035.1;gbkey=CDS;product=putative reverse transcriptase;protein_id=YP_406035.1;transl_table=11
NC_007607.1	RefSeq	region	31354	32659	.	-	.	ID=id757;gbkey=mobile_element
NC_007607.1	RefSeq	gene	31384	32007	.	-	.	ID=gene4644;Dbxref=GeneID:3776634;Name=SDY_P035;Note=SDYP035;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P035
NC_007607.1	RefSeq	CDS	31384	32007	.	-	0	ID=cds4104;Parent=gene4644;Dbxref=Genbank:YP_406036.1,GeneID:3776634;Name=YP_406036.1;gbkey=CDS;product=IS629 ORF2;protein_id=YP_406036.1;transl_table=11
NC_007607.1	RefSeq	gene	32204	32524	.	+	.	ID=gene4645;Dbxref=GeneID:3776635;Name=SDY_P036;Note=SDYP036;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P036
NC_007607.1	RefSeq	CDS	32204	32524	.	+	0	ID=cds4105;Parent=gene4645;Dbxref=Genbank:YP_406037.1,GeneID:3776635;Name=YP_406037.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406037.1;transl_table=11
NC_007607.1	RefSeq	gene	32657	34381	.	-	.	ID=gene4646;Dbxref=GeneID:3776636;Name=ipaH4.5;Note=SDYP037;gbkey=Gene;gene=ipaH4.5;gene_biotype=protein_coding;locus_tag=SDY_P037
NC_007607.1	RefSeq	CDS	32657	34381	.	-	0	ID=cds4106;Parent=gene4646;Dbxref=Genbank:YP_406038.1,GeneID:3776636;Name=YP_406038.1;gbkey=CDS;gene=ipaH4.5;product=invasion plasmid antigen;protein_id=YP_406038.1;transl_table=11
NC_007607.1	RefSeq	gene	34809	36506	.	-	.	ID=gene4647;Dbxref=GeneID:3776637;Name=ipaH7.8;Note=SDYP038;gbkey=Gene;gene=ipaH7.8;gene_biotype=protein_coding;locus_tag=SDY_P038
NC_007607.1	RefSeq	CDS	34809	36506	.	-	0	ID=cds4107;Parent=gene4647;Dbxref=Genbank:YP_406039.1,GeneID:3776637;Name=YP_406039.1;gbkey=CDS;gene=ipaH7.8;product=invasion plasmid antigen;protein_id=YP_406039.1;transl_table=11
NC_007607.1	RefSeq	region	36896	37008	.	-	.	ID=id758;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	region	37022	37246	.	-	.	ID=id759;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	region	37283	38220	.	-	.	ID=id760;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	37326	37700	.	-	.	ID=gene4648;Dbxref=GeneID:3776638;Name=SDY_P039;Note=SDYP039;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P039
NC_007607.1	RefSeq	CDS	37326	37700	.	-	0	ID=cds4108;Parent=gene4648;Dbxref=Genbank:YP_406040.1,GeneID:3776638;Name=YP_406040.1;gbkey=CDS;product=IS600 ORF2;protein_id=YP_406040.1;transl_table=11
NC_007607.1	RefSeq	gene	37678	38133	.	-	.	ID=gene4649;Dbxref=GeneID:3776639;Name=SDY_P040;Note=SDYP040;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P040
NC_007607.1	RefSeq	CDS	37678	38133	.	-	0	ID=cds4109;Parent=gene4649;Dbxref=Genbank:YP_406041.1,GeneID:3776639;Name=YP_406041.1;gbkey=CDS;product=IS600 ORF2;protein_id=YP_406041.1;transl_table=11
NC_007607.1	RefSeq	region	38221	38988	.	-	.	ID=id761;gbkey=mobile_element
NC_007607.1	RefSeq	gene	38236	38613	.	-	.	ID=gene4650;Dbxref=GeneID:3776640;Name=insB;Note=SDYP041;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_P041
NC_007607.1	RefSeq	CDS	38236	38613	.	-	0	ID=cds4110;Parent=gene4650;Dbxref=Genbank:YP_406042.1,GeneID:3776640;Name=YP_406042.1;gbkey=CDS;gene=insB;product=IS1 ORF2;protein_id=YP_406042.1;transl_table=11
NC_007607.1	RefSeq	region	39183	40104	.	-	.	ID=id762;gbkey=mobile_element
NC_007607.1	RefSeq	gene	39246	39695	.	+	.	ID=gene4651;Dbxref=GeneID:3776641;Name=SDY_P042;Note=SDYP042;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P042
NC_007607.1	RefSeq	CDS	39246	39695	.	+	0	ID=cds4111;Parent=gene4651;Dbxref=Genbank:YP_406043.1,GeneID:3776641;Name=YP_406043.1;gbkey=CDS;product=ISSfl1 ORF1;protein_id=YP_406043.1;transl_table=11
NC_007607.1	RefSeq	gene	39701	40090	.	+	.	ID=gene4652;Dbxref=GeneID:3776642;Name=SDY_P043;Note=SDYP043;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P043
NC_007607.1	RefSeq	CDS	39701	40090	.	+	0	ID=cds4112;Parent=gene4652;Dbxref=Genbank:YP_406044.1,GeneID:3776642;Name=YP_406044.1;gbkey=CDS;product=ISSfl1 ORF2;protein_id=YP_406044.1;transl_table=11
NC_007607.1	RefSeq	gene	40229	40396	.	+	.	ID=gene4653;Dbxref=GeneID:3776643;Name=SDY_P044;Note=SDYP044;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P044
NC_007607.1	RefSeq	CDS	40229	40396	.	+	0	ID=cds4113;Parent=gene4653;Dbxref=Genbank:YP_406045.1,GeneID:3776643;Name=YP_406045.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406045.1;transl_table=11
NC_007607.1	RefSeq	gene	40414	42162	.	-	.	ID=gene4654;Dbxref=GeneID:3776644;Name=ipaH1.4;Note=SDYP045;gbkey=Gene;gene=ipaH1.4;gene_biotype=protein_coding;locus_tag=SDY_P045
NC_007607.1	RefSeq	CDS	40414	42162	.	-	0	ID=cds4114;Parent=gene4654;Dbxref=Genbank:YP_406046.1,GeneID:3776644;Name=YP_406046.1;gbkey=CDS;gene=ipaH1.4;product=invasion plasmid antigen;protein_id=YP_406046.1;transl_table=11
NC_007607.1	RefSeq	gene	42529	42795	.	-	.	ID=gene4655;Dbxref=GeneID:3776645;Name=ospE1;Note=SDYP046;gbkey=Gene;gene=ospE1;gene_biotype=protein_coding;locus_tag=SDY_P046
NC_007607.1	RefSeq	CDS	42529	42795	.	-	0	ID=cds4115;Parent=gene4655;Dbxref=Genbank:YP_406047.1,GeneID:3776645;Name=YP_406047.1;gbkey=CDS;gene=ospE1;product=OspE1;protein_id=YP_406047.1;transl_table=11
NC_007607.1	RefSeq	gene	42851	43135	.	-	.	ID=gene4656;Dbxref=GeneID:3776646;Name=SDY_P047;Note=SDYP047;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P047
NC_007607.1	RefSeq	CDS	42851	43135	.	-	0	ID=cds4116;Parent=gene4656;Dbxref=Genbank:YP_406048.1,GeneID:3776646;Name=YP_406048.1;gbkey=CDS;product=IS1 ORF%2C fragment;protein_id=YP_406048.1;transl_table=11
NC_007607.1	RefSeq	region	42895	43032	.	-	.	ID=id763;Dbxref=GeneID:3776646;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	region	43461	43568	.	-	.	ID=id764;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	region	43569	44069	.	+	.	ID=id765;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	43633	43935	.	+	.	ID=gene4657;Dbxref=GeneID:3776647;Name=SDY_P048;Note=SDYP048;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P048
NC_007607.1	RefSeq	CDS	43633	43935	.	+	0	ID=cds4117;Parent=gene4657;Dbxref=Genbank:YP_406049.1,GeneID:3776647;Name=YP_406049.1;gbkey=CDS;product=IS600 ORF1;protein_id=YP_406049.1;transl_table=11
NC_007607.1	RefSeq	region	44070	44835	.	-	.	ID=id766;gbkey=mobile_element
NC_007607.1	RefSeq	gene	44084	44479	.	-	.	ID=gene4658;Dbxref=GeneID:3776466;Name=SDY_P049;Note=SDYP049;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P049
NC_007607.1	RefSeq	CDS	44084	44479	.	-	0	ID=cds4118;Parent=gene4658;Dbxref=Genbank:YP_406050.1,GeneID:3776466;Name=YP_406050.1;gbkey=CDS;product=iso-IS1 ORF2;protein_id=YP_406050.1;transl_table=11
NC_007607.1	RefSeq	gene	44506	44778	.	-	.	ID=gene4659;Dbxref=GeneID:3776467;Name=SDY_P050;Note=SDYP050;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P050
NC_007607.1	RefSeq	CDS	44506	44778	.	-	0	ID=cds4119;Parent=gene4659;Dbxref=Genbank:YP_406051.1,GeneID:3776467;Name=YP_406051.1;gbkey=CDS;product=iso-IS1 ORF1;protein_id=YP_406051.1;transl_table=11
NC_007607.1	RefSeq	region	44931	46236	.	-	.	ID=id767;gbkey=mobile_element
NC_007607.1	RefSeq	gene	44973	45620	.	-	.	ID=gene4660;Dbxref=GeneID:3776468;Name=SDY_P051;Note=SDYP051;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P051
NC_007607.1	RefSeq	CDS	44973	45620	.	-	0	ID=cds4120;Parent=gene4660;Dbxref=Genbank:YP_406052.1,GeneID:3776468;Name=YP_406052.1;gbkey=CDS;product=IS629 ORF2;protein_id=YP_406052.1;transl_table=11
NC_007607.1	RefSeq	gene	45781	46101	.	+	.	ID=gene4661;Dbxref=GeneID:3776556;Name=SDY_P052;Note=SDYP052;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P052
NC_007607.1	RefSeq	CDS	45781	46101	.	+	0	ID=cds4121;Parent=gene4661;Dbxref=Genbank:YP_406053.1,GeneID:3776556;Name=YP_406053.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406053.1;transl_table=11
NC_007607.1	RefSeq	gene	46208	46537	.	-	.	ID=gene4662;Dbxref=GeneID:3776648;Name=SDY_P053;Note=SDYP053;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P053
NC_007607.1	RefSeq	CDS	46208	46537	.	-	0	ID=cds4122;Parent=gene4662;Dbxref=Genbank:YP_406054.1,GeneID:3776648;Name=YP_406054.1;gbkey=CDS;product=putative transposase;protein_id=YP_406054.1;transl_table=11
NC_007607.1	RefSeq	gene	46613	46786	.	-	.	ID=gene4663;Dbxref=GeneID:3776649;Name=SDY_P054;Note=SDYP054;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P054
NC_007607.1	RefSeq	CDS	46613	46786	.	-	0	ID=cds4123;Parent=gene4663;Dbxref=Genbank:YP_406055.1,GeneID:3776649;Name=YP_406055.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406055.1;transl_table=11
NC_007607.1	RefSeq	gene	47797	49209	.	+	.	ID=gene4664;Dbxref=GeneID:3776650;Name=ospC1;Note=SDYP055;gbkey=Gene;gene=ospC1;gene_biotype=protein_coding;locus_tag=SDY_P055
NC_007607.1	RefSeq	CDS	47797	49209	.	+	0	ID=cds4124;Parent=gene4664;Dbxref=Genbank:YP_406056.1,GeneID:3776650;Name=YP_406056.1;gbkey=CDS;gene=ospC1;product=OspC1;protein_id=YP_406056.1;transl_table=11
NC_007607.1	RefSeq	gene	49566	51215	.	+	.	ID=gene4665;Dbxref=GeneID:3776651;Name=ospD3;Note=SDYP056;gbkey=Gene;gene=ospD3;gene_biotype=protein_coding;locus_tag=SDY_P056
NC_007607.1	RefSeq	CDS	49566	51215	.	+	0	ID=cds4125;Parent=gene4665;Dbxref=Genbank:YP_406057.1,GeneID:3776651;Name=YP_406057.1;gbkey=CDS;gene=ospD3;product=OspD3;protein_id=YP_406057.1;transl_table=11
NC_007607.1	RefSeq	region	51498	52263	.	-	.	ID=id768;gbkey=mobile_element
NC_007607.1	RefSeq	gene	51512	51907	.	-	.	ID=gene4666;Dbxref=GeneID:3776652;Name=SDY_P057;Note=SDYP057;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P057
NC_007607.1	RefSeq	CDS	51512	51907	.	-	0	ID=cds4126;Parent=gene4666;Dbxref=Genbank:YP_406058.1,GeneID:3776652;Name=YP_406058.1;gbkey=CDS;product=iso-IS1 ORF2;protein_id=YP_406058.1;transl_table=11
NC_007607.1	RefSeq	gene	51934	52206	.	-	.	ID=gene4667;Dbxref=GeneID:3776653;Name=SDY_P058;Note=SDYP058;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P058
NC_007607.1	RefSeq	CDS	51934	52206	.	-	0	ID=cds4127;Parent=gene4667;Dbxref=Genbank:YP_406059.1,GeneID:3776653;Name=YP_406059.1;gbkey=CDS;product=iso-IS1 ORF1;protein_id=YP_406059.1;transl_table=11
NC_007607.1	RefSeq	gene	52421	52549	.	+	.	ID=gene4668;Dbxref=GeneID:3776654;Name=SDY_P059;Note=SDYP059;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P059
NC_007607.1	RefSeq	CDS	52421	52549	.	+	0	ID=cds4128;Parent=gene4668;Dbxref=Genbank:YP_406060.1,GeneID:3776654;Name=YP_406060.1;gbkey=CDS;product=putative transposase%2C fragment;protein_id=YP_406060.1;transl_table=11
NC_007607.1	RefSeq	gene	52645	53223	.	+	.	ID=gene4669;Dbxref=GeneID:3776655;Name=SDY_P060;Note=SDYP060;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P060
NC_007607.1	RefSeq	CDS	52645	53223	.	+	0	ID=cds4129;Parent=gene4669;Dbxref=Genbank:YP_406061.1,GeneID:3776655;Name=YP_406061.1;gbkey=CDS;product=putative transposase;protein_id=YP_406061.1;transl_table=11
NC_007607.1	RefSeq	gene	53208	53498	.	+	.	ID=gene4670;Dbxref=GeneID:3776656;Name=SDY_P061;Note=SDYP061;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P061
NC_007607.1	RefSeq	CDS	53208	53498	.	+	0	ID=cds4130;Parent=gene4670;Dbxref=Genbank:YP_406062.1,GeneID:3776656;Name=YP_406062.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406062.1;transl_table=11
NC_007607.1	RefSeq	region	53667	54976	.	+	.	ID=id769;gbkey=mobile_element
NC_007607.1	RefSeq	gene	53802	54053	.	-	.	ID=gene4671;Dbxref=GeneID:3776658;Name=SDY_P063;Note=SDYP063;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P063
NC_007607.1	RefSeq	CDS	53802	54053	.	-	0	ID=cds4131;Parent=gene4671;Dbxref=Genbank:YP_406063.1,GeneID:3776658;Name=YP_406063.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406063.1;transl_table=11
NC_007607.1	RefSeq	gene	54044	54934	.	+	.	ID=gene4672;Dbxref=GeneID:3776657;Name=SDY_P062;Note=SDYP062;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P062
NC_007607.1	RefSeq	CDS	54044	54934	.	+	0	ID=cds4132;Parent=gene4672;Dbxref=Genbank:YP_406064.1,GeneID:3776657;Name=YP_406064.1;gbkey=CDS;product=IS629 ORF2;protein_id=YP_406064.1;transl_table=11
NC_007607.1	RefSeq	gene	55224	56927	.	+	.	ID=gene4673;Dbxref=GeneID:3776659;Name=ushA;Note=SDYP064;gbkey=Gene;gene=ushA;gene_biotype=protein_coding;locus_tag=SDY_P064
NC_007607.1	RefSeq	CDS	55224	56927	.	+	0	ID=cds4133;Parent=gene4673;Dbxref=Genbank:YP_406065.1,GeneID:3776659;Name=YP_406065.1;Note=catalyzes the degradation of periplasmic UDP-glucose to uridine%2C glucose-1-phosphate and inorganic phosphate%3B specific for uridine nucleotides;gbkey=CDS;gene=ushA;product=bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor;protein_id=YP_406065.1;transl_table=11
NC_007607.1	RefSeq	region	56939	57704	.	+	.	ID=id770;gbkey=mobile_element
NC_007607.1	RefSeq	gene	56996	57268	.	+	.	ID=gene4674;Dbxref=GeneID:3776660;Name=SDY_P065;Note=SDYP065;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P065
NC_007607.1	RefSeq	CDS	56996	57268	.	+	0	ID=cds4134;Parent=gene4674;Dbxref=Genbank:YP_406066.1,GeneID:3776660;Name=YP_406066.1;gbkey=CDS;product=iso-IS1 ORF1;protein_id=YP_406066.1;transl_table=11
NC_007607.1	RefSeq	gene	57295	57690	.	+	.	ID=gene4675;Dbxref=GeneID:3776661;Name=SDY_P066;Note=SDYP066;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P066
NC_007607.1	RefSeq	CDS	57295	57690	.	+	0	ID=cds4135;Parent=gene4675;Dbxref=Genbank:YP_406067.1,GeneID:3776661;Name=YP_406067.1;gbkey=CDS;product=iso-IS1 ORF2;protein_id=YP_406067.1;transl_table=11
NC_007607.1	RefSeq	gene	58105	58854	.	+	.	ID=gene4676;Dbxref=GeneID:3776662;Name=phoN1;Note=SDYP067;gbkey=Gene;gene=phoN1;gene_biotype=protein_coding;locus_tag=SDY_P067
NC_007607.1	RefSeq	CDS	58105	58854	.	+	0	ID=cds4136;Parent=gene4676;Dbxref=Genbank:YP_406068.1,GeneID:3776662;Name=YP_406068.1;gbkey=CDS;gene=phoN1;product=PhoN1;protein_id=YP_406068.1;transl_table=11
NC_007607.1	RefSeq	region	58896	59010	.	-	.	ID=id771;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	region	59009	59930	.	+	.	ID=id772;gbkey=mobile_element
NC_007607.1	RefSeq	gene	59024	59413	.	-	.	ID=gene4677;Dbxref=GeneID:3776663;Name=SDY_P068;Note=SDYP068;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P068
NC_007607.1	RefSeq	CDS	59024	59413	.	-	0	ID=cds4137;Parent=gene4677;Dbxref=Genbank:YP_406069.1,GeneID:3776663;Name=YP_406069.1;gbkey=CDS;product=ISSfl1 ORF2;protein_id=YP_406069.1;transl_table=11
NC_007607.1	RefSeq	gene	59419	59643	.	-	.	ID=gene4678;Dbxref=GeneID:3776664;Name=SDY_P069;Note=SDYP069;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P069
NC_007607.1	RefSeq	CDS	59419	59643	.	-	0	ID=cds4138;Parent=gene4678;Dbxref=Genbank:YP_406070.1,GeneID:3776664;Name=YP_406070.1;gbkey=CDS;product=ISSfl1 ORF1;protein_id=YP_406070.1;transl_table=11
NC_007607.1	RefSeq	gene	60293	61747	.	+	.	ID=gene4679;Dbxref=GeneID:3776665;Name=ospC2;Note=SDYP070;gbkey=Gene;gene=ospC2;gene_biotype=protein_coding;locus_tag=SDY_P070
NC_007607.1	RefSeq	CDS	60293	61747	.	+	0	ID=cds4139;Parent=gene4679;Dbxref=Genbank:YP_406071.1,GeneID:3776665;Name=YP_406071.1;gbkey=CDS;gene=ospC2;product=OspC2;protein_id=YP_406071.1;transl_table=11
NC_007607.1	RefSeq	region	61882	62804	.	+	.	ID=id773;gbkey=mobile_element
NC_007607.1	RefSeq	gene	61897	62286	.	-	.	ID=gene4680;Dbxref=GeneID:3776573;Name=SDY_P071;Note=SDYP071;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P071
NC_007607.1	RefSeq	CDS	61897	62286	.	-	0	ID=cds4140;Parent=gene4680;Dbxref=Genbank:YP_406072.1,GeneID:3776573;Name=YP_406072.1;gbkey=CDS;product=ISSfl1 ORF2;protein_id=YP_406072.1;transl_table=11
NC_007607.1	RefSeq	gene	62292	62741	.	-	.	ID=gene4681;Dbxref=GeneID:3776574;Name=SDY_P072;Note=SDYP072;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P072
NC_007607.1	RefSeq	CDS	62292	62741	.	-	0	ID=cds4141;Parent=gene4681;Dbxref=Genbank:YP_406073.1,GeneID:3776574;Name=YP_406073.1;gbkey=CDS;product=ISSfl1 ORF1;protein_id=YP_406073.1;transl_table=11
NC_007607.1	RefSeq	gene	62787	63161	.	-	.	ID=gene4682;Dbxref=GeneID:3776575;Name=SDY_P073;Note=SDYP073;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P073
NC_007607.1	RefSeq	CDS	62787	63161	.	-	0	ID=cds4142;Parent=gene4682;Dbxref=Genbank:YP_406074.1,GeneID:3776575;Name=YP_406074.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406074.1;transl_table=11
NC_007607.1	RefSeq	gene	63347	63742	.	-	.	ID=gene4683;Dbxref=GeneID:3776576;Name=stbB;Note=SDYP074;gbkey=Gene;gene=stbB;gene_biotype=protein_coding;locus_tag=SDY_P074
NC_007607.1	RefSeq	CDS	63347	63742	.	-	0	ID=cds4143;Parent=gene4683;Dbxref=Genbank:YP_406075.1,GeneID:3776576;Name=YP_406075.1;gbkey=CDS;gene=stbB;product=plasmid stable inheritance protein;protein_id=YP_406075.1;transl_table=11
NC_007607.1	RefSeq	gene	63742	64701	.	-	.	ID=gene4684;Dbxref=GeneID:3776577;Name=stbA;Note=SDYP075;gbkey=Gene;gene=stbA;gene_biotype=protein_coding;locus_tag=SDY_P075
NC_007607.1	RefSeq	CDS	63742	64701	.	-	0	ID=cds4144;Parent=gene4684;Dbxref=Genbank:YP_406076.1,GeneID:3776577;Name=YP_406076.1;gbkey=CDS;gene=stbA;product=plasmid stable inheritance protein;protein_id=YP_406076.1;transl_table=11
NC_007607.1	RefSeq	gene	65116	65511	.	+	.	ID=gene4685;Dbxref=GeneID:3776578;Name=SDY_P076;Note=SDYP076;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P076
NC_007607.1	RefSeq	CDS	65116	65511	.	+	0	ID=cds4145;Parent=gene4685;Dbxref=Genbank:YP_406077.1,GeneID:3776578;Name=YP_406077.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406077.1;transl_table=11
NC_007607.1	RefSeq	region	65465	66272	.	-	.	ID=id774;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	65508	66221	.	-	.	ID=gene4686;Dbxref=GeneID:3776579;Name=SDY_P077;Note=SDYP077;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P077
NC_007607.1	RefSeq	CDS	65508	66221	.	-	0	ID=cds4146;Parent=gene4686;Dbxref=Genbank:YP_406078.1,GeneID:3776579;Name=YP_406078.1;gbkey=CDS;product=IS600 ORF2;protein_id=YP_406078.1;transl_table=11
NC_007607.1	RefSeq	region	66273	67040	.	-	.	ID=id775;gbkey=mobile_element
NC_007607.1	RefSeq	gene	66288	66665	.	-	.	ID=gene4687;Dbxref=GeneID:3776580;Name=insB;Note=SDYP078;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_P078
NC_007607.1	RefSeq	CDS	66288	66665	.	-	0	ID=cds4147;Parent=gene4687;Dbxref=Genbank:YP_406079.1,GeneID:3776580;Name=YP_406079.1;gbkey=CDS;gene=insB;product=IS1 ORF2;protein_id=YP_406079.1;transl_table=11
NC_007607.1	RefSeq	region	67040	67505	.	-	.	ID=id776;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	67139	67441	.	-	.	ID=gene4688;Dbxref=GeneID:3776581;Name=SDY_P079;Note=SDYP079;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P079
NC_007607.1	RefSeq	CDS	67139	67441	.	-	0	ID=cds4148;Parent=gene4688;Dbxref=Genbank:YP_406080.1,GeneID:3776581;Name=YP_406080.1;gbkey=CDS;product=IS600 ORF1;protein_id=YP_406080.1;transl_table=11
NC_007607.1	RefSeq	region	67505	67692	.	-	.	ID=id777;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	67698	67853	.	-	.	ID=gene4689;Dbxref=GeneID:3776582;Name=SDY_P080;Note=SDYP080;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P080
NC_007607.1	RefSeq	CDS	67698	67853	.	-	0	ID=cds4149;Parent=gene4689;Dbxref=Genbank:YP_406081.1,GeneID:3776582;Name=YP_406081.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406081.1;transl_table=11
NC_007607.1	RefSeq	region	67922	68186	.	-	.	ID=id778;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	68076	68294	.	-	.	ID=gene4690;Dbxref=GeneID:3776583;Name=SDY_P081;Note=SDYP081;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P081
NC_007607.1	RefSeq	CDS	68076	68294	.	-	0	ID=cds4150;Parent=gene4690;Dbxref=Genbank:YP_406082.1,GeneID:3776583;Name=YP_406082.1;gbkey=CDS;product=IS2 orf1%2C fragment;protein_id=YP_406082.1;transl_table=11
NC_007607.1	RefSeq	gene	68349	68987	.	-	.	ID=gene4691;Dbxref=GeneID:3776584;Name=SDY_P082;Note=SDYP082;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P082
NC_007607.1	RefSeq	CDS	68349	68987	.	-	0	ID=cds4151;Parent=gene4691;Dbxref=Genbank:YP_406083.1,GeneID:3776584;Name=YP_406083.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406083.1;transl_table=11
NC_007607.1	RefSeq	region	69146	69507	.	-	.	ID=id779;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	69343	69615	.	-	.	ID=gene4692;Dbxref=GeneID:3776585;Name=SDY_P083;Note=SDYP083;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P083
NC_007607.1	RefSeq	CDS	69343	69615	.	-	0	ID=cds4152;Parent=gene4692;Dbxref=Genbank:YP_406084.1,GeneID:3776585;Name=YP_406084.1;gbkey=CDS;product=iso-IS1 ORF1;protein_id=YP_406084.1;transl_table=11
NC_007607.1	RefSeq	region	69937	70147	.	+	.	ID=id780;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	69951	70184	.	+	.	ID=gene4693;Dbxref=GeneID:3776586;Name=SDY_P084;Note=SDYP084;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P084
NC_007607.1	RefSeq	CDS	69951	70184	.	+	0	ID=cds4153;Parent=gene4693;Dbxref=Genbank:YP_406085.1,GeneID:3776586;Name=YP_406085.1;gbkey=CDS;product=IS100 ORF2;protein_id=YP_406085.1;transl_table=11
NC_007607.1	RefSeq	gene	70236	70526	.	-	.	ID=gene4694;Dbxref=GeneID:3776587;Name=SDY_P085;Note=SDYP085;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P085
NC_007607.1	RefSeq	CDS	70236	70526	.	-	0	ID=cds4154;Parent=gene4694;Dbxref=Genbank:YP_406086.1,GeneID:3776587;Name=YP_406086.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406086.1;transl_table=11
NC_007607.1	RefSeq	gene	70533	70745	.	-	.	ID=gene4695;Dbxref=GeneID:3776588;Name=SDY_P086;Note=SDYP086;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P086
NC_007607.1	RefSeq	CDS	70533	70745	.	-	0	ID=cds4155;Parent=gene4695;Dbxref=Genbank:YP_406087.1,GeneID:3776588;Name=YP_406087.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406087.1;transl_table=11
NC_007607.1	RefSeq	gene	71197	71481	.	+	.	ID=gene4696;Dbxref=GeneID:3776589;Name=SDY_P087;Note=SDYP087;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P087
NC_007607.1	RefSeq	CDS	71197	71481	.	+	0	ID=cds4156;Parent=gene4696;Dbxref=Genbank:YP_406088.1,GeneID:3776589;Name=YP_406088.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406088.1;transl_table=11
NC_007607.1	RefSeq	gene	71481	71756	.	+	.	ID=gene4697;Dbxref=GeneID:3776590;Name=SDY_P088;Note=SDYP088;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P088
NC_007607.1	RefSeq	CDS	71481	71756	.	+	0	ID=cds4157;Parent=gene4697;Dbxref=Genbank:YP_406089.1,GeneID:3776590;Name=YP_406089.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406089.1;transl_table=11
NC_007607.1	RefSeq	gene	71809	71982	.	+	.	ID=gene4698;Dbxref=GeneID:3776591;Name=SDY_P089;Note=SDYP089;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P089
NC_007607.1	RefSeq	CDS	71809	71982	.	+	0	ID=cds4158;Parent=gene4698;Dbxref=Genbank:YP_406090.1,GeneID:3776591;Name=YP_406090.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406090.1;transl_table=11
NC_007607.1	RefSeq	gene	72117	72482	.	-	.	ID=gene4699;Dbxref=GeneID:3776592;Name=SDY_P090;Note=SDYP090;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P090
NC_007607.1	RefSeq	CDS	72117	72482	.	-	0	ID=cds4159;Parent=gene4699;Dbxref=Genbank:YP_406091.1,GeneID:3776592;Name=YP_406091.1;gbkey=CDS;product=plasmid stable inheritance protein;protein_id=YP_406091.1;transl_table=11
NC_007607.1	RefSeq	gene	72514	73011	.	-	.	ID=gene4700;Dbxref=GeneID:3776594;Name=SDY_P092;Note=SDYP092;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P092
NC_007607.1	RefSeq	CDS	72514	73011	.	-	0	ID=cds4160;Parent=gene4700;Dbxref=Genbank:YP_406092.1,GeneID:3776594;Name=YP_406092.1;gbkey=CDS;product=putative plasmid stable inheritance protein;protein_id=YP_406092.1;transl_table=11
NC_007607.1	RefSeq	gene	73010	73771	.	+	.	ID=gene4701;Dbxref=GeneID:3776593;Name=SDY_P091;Note=SDYP091;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P091
NC_007607.1	RefSeq	CDS	73010	73771	.	+	0	ID=cds4161;Parent=gene4701;Dbxref=Genbank:YP_406093.1,GeneID:3776593;Name=YP_406093.1;gbkey=CDS;product=putative IS orf%2C fragment;protein_id=YP_406093.1;transl_table=11
NC_007607.1	RefSeq	gene	73771	74151	.	+	.	ID=gene4702;Dbxref=GeneID:3776595;Name=SDY_P093;Note=SDYP093;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P093
NC_007607.1	RefSeq	CDS	73771	74151	.	+	0	ID=cds4162;Parent=gene4702;Dbxref=Genbank:YP_406094.1,GeneID:3776595;Name=YP_406094.1;gbkey=CDS;product=putative IS orf%2C fragment;protein_id=YP_406094.1;transl_table=11
NC_007607.1	RefSeq	region	74513	75277	.	-	.	ID=id781;gbkey=mobile_element
NC_007607.1	RefSeq	gene	74527	74742	.	-	.	ID=gene4703;Dbxref=GeneID:3776596;Name=SDY_P094;Note=SDYP094;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P094
NC_007607.1	RefSeq	CDS	74527	74742	.	-	0	ID=cds4163;Parent=gene4703;Dbxref=Genbank:YP_406095.1,GeneID:3776596;Name=YP_406095.1;gbkey=CDS;product=iso-IS1 ORF2;protein_id=YP_406095.1;transl_table=11
NC_007607.1	RefSeq	gene	74948	75220	.	-	.	ID=gene4704;Dbxref=GeneID:3776597;Name=SDY_P095;Note=SDYP095;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P095
NC_007607.1	RefSeq	CDS	74948	75220	.	-	0	ID=cds4164;Parent=gene4704;Dbxref=Genbank:YP_406096.1,GeneID:3776597;Name=YP_406096.1;gbkey=CDS;product=iso-IS1 ORF1;protein_id=YP_406096.1;transl_table=11
NC_007607.1	RefSeq	gene	75460	75678	.	+	.	ID=gene4705;Dbxref=GeneID:3776598;Name=ccdA;Note=SDYP096;gbkey=Gene;gene=ccdA;gene_biotype=protein_coding;locus_tag=SDY_P096
NC_007607.1	RefSeq	CDS	75460	75678	.	+	0	ID=cds4165;Parent=gene4705;Dbxref=Genbank:YP_406097.1,GeneID:3776598;Name=YP_406097.1;gbkey=CDS;gene=ccdA;product=plasmid maintenance protein CcdA;protein_id=YP_406097.1;transl_table=11
NC_007607.1	RefSeq	gene	75680	75985	.	+	.	ID=gene4706;Dbxref=GeneID:3776599;Name=ccdB;Note=SDYP097;gbkey=Gene;gene=ccdB;gene_biotype=protein_coding;locus_tag=SDY_P097
NC_007607.1	RefSeq	CDS	75680	75985	.	+	0	ID=cds4166;Parent=gene4706;Dbxref=Genbank:YP_406098.1,GeneID:3776599;Name=YP_406098.1;Note=controlled cell death protein%3B post-segregation toxin%3B toxin addiction system;gbkey=CDS;gene=ccdB;product=plasmid maintenance protein CcdB;protein_id=YP_406098.1;transl_table=11
NC_007607.1	RefSeq	region	76187	76952	.	+	.	ID=id782;gbkey=mobile_element
NC_007607.1	RefSeq	gene	76543	76938	.	+	.	ID=gene4707;Dbxref=GeneID:3776600;Name=SDY_P098;Note=SDYP098;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P098
NC_007607.1	RefSeq	CDS	76543	76938	.	+	0	ID=cds4167;Parent=gene4707;Dbxref=Genbank:YP_406099.1,GeneID:3776600;Name=YP_406099.1;gbkey=CDS;product=iso-IS1 ORF2;protein_id=YP_406099.1;transl_table=11
NC_007607.1	RefSeq	gene	77122	78789	.	+	.	ID=gene4708;Dbxref=GeneID:3776601;Name=ipaH9.8;Note=SDYP099;gbkey=Gene;gene=ipaH9.8;gene_biotype=protein_coding;locus_tag=SDY_P099
NC_007607.1	RefSeq	CDS	77122	78789	.	+	0	ID=cds4168;Parent=gene4708;Dbxref=Genbank:YP_406100.1,GeneID:3776601;Name=YP_406100.1;gbkey=CDS;gene=ipaH9.8;product=invasion plasmid antigen;protein_id=YP_406100.1;transl_table=11
NC_007607.1	RefSeq	gene	78997	79266	.	+	.	ID=gene4709;Dbxref=GeneID:3776602;Name=yacA;Note=SDYP100;gbkey=Gene;gene=yacA;gene_biotype=protein_coding;locus_tag=SDY_P100
NC_007607.1	RefSeq	CDS	78997	79266	.	+	0	ID=cds4169;Parent=gene4709;Dbxref=Genbank:YP_406101.1,GeneID:3776602;Name=YP_406101.1;gbkey=CDS;gene=yacA;product=hypothetical protein;protein_id=YP_406101.1;transl_table=11
NC_007607.1	RefSeq	gene	79518	80108	.	+	.	ID=gene4710;Dbxref=GeneID:3776603;Name=ospG;Note=SDYP101;gbkey=Gene;gene=ospG;gene_biotype=protein_coding;locus_tag=SDY_P101
NC_007607.1	RefSeq	CDS	79518	80108	.	+	0	ID=cds4170;Parent=gene4710;Dbxref=Genbank:YP_406102.1,GeneID:3776603;Name=YP_406102.1;gbkey=CDS;gene=ospG;product=OspG;protein_id=YP_406102.1;transl_table=11
NC_007607.1	RefSeq	gene	80513	80755	.	+	.	ID=gene4711;Dbxref=GeneID:3776604;Name=SDY_P102;Note=SDYP102;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P102
NC_007607.1	RefSeq	CDS	80513	80755	.	+	0	ID=cds4171;Parent=gene4711;Dbxref=Genbank:YP_406103.1,GeneID:3776604;Name=YP_406103.1;gbkey=CDS;product=putative IS orf;protein_id=YP_406103.1;transl_table=11
NC_007607.1	RefSeq	region	80728	82153	.	+	.	ID=id783;gbkey=mobile_element
NC_007607.1	RefSeq	gene	80794	82140	.	+	.	ID=gene4712;Dbxref=GeneID:3776605;Name=SDY_P103;Note=SDYP103;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P103
NC_007607.1	RefSeq	CDS	80794	82140	.	+	0	ID=cds4172;Parent=gene4712;Dbxref=Genbank:YP_406104.1,GeneID:3776605;Name=YP_406104.1;gbkey=CDS;product=IS4 orf;protein_id=YP_406104.1;transl_table=11
NC_007607.1	RefSeq	gene	82151	82393	.	-	.	ID=gene4713;Dbxref=GeneID:3776606;Name=SDY_P104;Note=SDYP104;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P104
NC_007607.1	RefSeq	CDS	82151	82393	.	-	0	ID=cds4173;Parent=gene4713;Dbxref=Genbank:YP_406105.1,GeneID:3776606;Name=YP_406105.1;gbkey=CDS;product=putative IS orf;protein_id=YP_406105.1;transl_table=11
NC_007607.1	RefSeq	region	82340	82668	.	+	.	ID=id784;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	82491	82709	.	+	.	ID=gene4714;Dbxref=GeneID:3776607;Name=SDY_P105;Note=SDYP105;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P105
NC_007607.1	RefSeq	CDS	82491	82709	.	+	0	ID=cds4174;Parent=gene4714;Dbxref=Genbank:YP_406106.1,GeneID:3776607;Name=YP_406106.1;gbkey=CDS;product=IS3 ORF2;protein_id=YP_406106.1;transl_table=11
NC_007607.1	RefSeq	gene	82697	85546	.	-	.	ID=gene4715;Dbxref=GeneID:3776608;Name=SDY_P106;Note=SDYP106;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P106
NC_007607.1	RefSeq	CDS	82697	85546	.	-	0	ID=cds4175;Parent=gene4715;Dbxref=Genbank:YP_406107.1,GeneID:3776608;Name=YP_406107.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406107.1;transl_table=11
NC_007607.1	RefSeq	region	85796	85898	.	-	.	ID=id785;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	86143	86934	.	+	.	ID=gene4716;Dbxref=GeneID:3776609;Name=shf;Note=SDYP107;gbkey=Gene;gene=shf;gene_biotype=protein_coding;locus_tag=SDY_P107
NC_007607.1	RefSeq	CDS	86143	86934	.	+	0	ID=cds4176;Parent=gene4716;Dbxref=Genbank:YP_406108.1,GeneID:3776609;Name=YP_406108.1;gbkey=CDS;gene=shf;product=putative carbohydrate transport protein;protein_id=YP_406108.1;transl_table=11
NC_007607.1	RefSeq	gene	87084	88025	.	+	.	ID=gene4717;Dbxref=GeneID:3776610;Name=rfbU;Note=SDYP108;gbkey=Gene;gene=rfbU;gene_biotype=protein_coding;locus_tag=SDY_P108
NC_007607.1	RefSeq	CDS	87084	88025	.	+	0	ID=cds4177;Parent=gene4717;Dbxref=Genbank:YP_406109.1,GeneID:3776610;Name=YP_406109.1;gbkey=CDS;gene=rfbU;product=UDP-sugar hydrolase;protein_id=YP_406109.1;transl_table=11
NC_007607.1	RefSeq	gene	88030	88980	.	+	.	ID=gene4718;Dbxref=GeneID:3776611;Name=virK;Note=SDYP109;gbkey=Gene;gene=virK;gene_biotype=protein_coding;locus_tag=SDY_P109
NC_007607.1	RefSeq	CDS	88030	88980	.	+	0	ID=cds4178;Parent=gene4718;Dbxref=Genbank:YP_406110.1,GeneID:3776611;Name=YP_406110.1;gbkey=CDS;gene=virK;product=VirK;protein_id=YP_406110.1;transl_table=11
NC_007607.1	RefSeq	gene	89045	89989	.	+	.	ID=gene4719;Dbxref=GeneID:3776666;Name=msbB2;Note=SDYP110;gbkey=Gene;gene=msbB2;gene_biotype=protein_coding;locus_tag=SDY_P110
NC_007607.1	RefSeq	CDS	89045	89989	.	+	0	ID=cds4179;Parent=gene4719;Dbxref=Genbank:YP_406111.1,GeneID:3776666;Name=YP_406111.1;Note=Transfers myristate or laurate%2C activated on ACP%2C to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA;gbkey=CDS;gene=msbB2;product=lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase;protein_id=YP_406111.1;transl_table=11
NC_007607.1	RefSeq	gene	90163	90831	.	+	.	ID=gene4720;Dbxref=GeneID:3776667;Name=SDY_P111;Note=SDYP111;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P111
NC_007607.1	RefSeq	CDS	90163	90831	.	+	0	ID=cds4180;Parent=gene4720;Dbxref=Genbank:YP_406112.1,GeneID:3776667;Name=YP_406112.1;gbkey=CDS;product=putative transposase;protein_id=YP_406112.1;transl_table=11
NC_007607.1	RefSeq	gene	90973	91281	.	-	.	ID=gene4721;Dbxref=GeneID:3776668;Name=SDY_P112;Note=SDYP112;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P112
NC_007607.1	RefSeq	CDS	90973	91281	.	-	0	ID=cds4181;Parent=gene4721;Dbxref=Genbank:YP_406113.1,GeneID:3776668;Name=YP_406113.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406113.1;transl_table=11
NC_007607.1	RefSeq	gene	91342	91545	.	-	.	ID=gene4722;Dbxref=GeneID:3776669;Name=SDY_P113;Note=SDYP113;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P113
NC_007607.1	RefSeq	CDS	91342	91545	.	-	0	ID=cds4182;Parent=gene4722;Dbxref=Genbank:YP_406114.1,GeneID:3776669;Name=YP_406114.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406114.1;transl_table=11
NC_007607.1	RefSeq	region	91569	92326	.	+	.	ID=id786;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	91637	92329	.	+	.	ID=gene4723;Dbxref=GeneID:3776670;Name=SDY_P114;Note=SDYP114;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P114
NC_007607.1	RefSeq	CDS	91637	92329	.	+	0	ID=cds4183;Parent=gene4723;Dbxref=Genbank:YP_406115.1,GeneID:3776670;Name=YP_406115.1;gbkey=CDS;product=IS186 ORF1;protein_id=YP_406115.1;transl_table=11
NC_007607.1	RefSeq	region	92327	93590	.	-	.	ID=id787;gbkey=mobile_element
NC_007607.1	RefSeq	gene	92370	93083	.	-	.	ID=gene4724;Dbxref=GeneID:3776671;Name=SDY_P115;Note=SDYP115;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P115
NC_007607.1	RefSeq	CDS	92370	93083	.	-	0	ID=cds4184;Parent=gene4724;Dbxref=Genbank:YP_406116.1,GeneID:3776671;Name=YP_406116.1;gbkey=CDS;product=IS600 ORF2;protein_id=YP_406116.1;transl_table=11
NC_007607.1	RefSeq	gene	93224	93526	.	-	.	ID=gene4725;Dbxref=GeneID:3776672;Name=SDY_P116;Note=SDYP116;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P116
NC_007607.1	RefSeq	CDS	93224	93526	.	-	0	ID=cds4185;Parent=gene4725;Dbxref=Genbank:YP_406117.1,GeneID:3776672;Name=YP_406117.1;gbkey=CDS;product=IS600 ORF1;protein_id=YP_406117.1;transl_table=11
NC_007607.1	RefSeq	gene	93565	95079	.	+	.	ID=gene4726;Dbxref=GeneID:3776673;Name=traD;Note=SDYP117;gbkey=Gene;gene=traD;gene_biotype=protein_coding;locus_tag=SDY_P117
NC_007607.1	RefSeq	CDS	93565	95079	.	+	0	ID=cds4186;Parent=gene4726;Dbxref=Genbank:YP_406118.1,GeneID:3776673;Name=YP_406118.1;gbkey=CDS;gene=traD;product=hypothetical protein;protein_id=YP_406118.1;transl_table=11
NC_007607.1	RefSeq	gene	94961	95374	.	+	.	ID=gene4727;Dbxref=GeneID:3776674;Name=SDY_P118;Note=SDYP118;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P118
NC_007607.1	RefSeq	CDS	94961	95374	.	+	0	ID=cds4187;Parent=gene4727;Dbxref=Genbank:YP_406119.1,GeneID:3776674;Name=YP_406119.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406119.1;transl_table=11
NC_007607.1	RefSeq	gene	95374	96093	.	+	.	ID=gene4728;Dbxref=GeneID:3776675;Name=trbH;Note=SDYP119;gbkey=Gene;gene=trbH;gene_biotype=protein_coding;locus_tag=SDY_P119
NC_007607.1	RefSeq	CDS	95374	96093	.	+	0	ID=cds4188;Parent=gene4728;Dbxref=Genbank:YP_406120.1,GeneID:3776675;Name=YP_406120.1;gbkey=CDS;gene=trbH;product=TrbH;protein_id=YP_406120.1;transl_table=11
NC_007607.1	RefSeq	gene	95781	96008	.	-	.	ID=gene4729;Dbxref=GeneID:3776676;Name=mvpT;Note=SDYP120;gbkey=Gene;gene=mvpT;gene_biotype=protein_coding;locus_tag=SDY_P120
NC_007607.1	RefSeq	CDS	95781	96008	.	-	0	ID=cds4189;Parent=gene4729;Dbxref=Genbank:YP_406121.1,GeneID:3776676;Name=YP_406121.1;gbkey=CDS;gene=mvpT;product=plasmid maintenance protein;protein_id=YP_406121.1;transl_table=11
NC_007607.1	RefSeq	gene	96090	96509	.	+	.	ID=gene4730;Dbxref=GeneID:3776677;Name=SDY_P121;Note=SDYP121;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P121
NC_007607.1	RefSeq	CDS	96090	96509	.	+	0	ID=cds4190;Parent=gene4730;Dbxref=Genbank:YP_406122.1,GeneID:3776677;Name=YP_406122.1;gbkey=CDS;product=oriT nicking and unwinding protein%2C fragment;protein_id=YP_406122.1;transl_table=11
NC_007607.1	RefSeq	gene	96517	100710	.	+	.	ID=gene4731;Dbxref=GeneID:3776678;Name=SDY_P122;Note=SDYP122;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P122
NC_007607.1	RefSeq	CDS	96517	100710	.	+	0	ID=cds4191;Parent=gene4731;Dbxref=Genbank:YP_406123.1,GeneID:3776678;Name=YP_406123.1;Note=cleaves origin of transfer and unwinds%3B oriT relaxase;gbkey=CDS;product=conjugal transfer nickase/helicase TraI;protein_id=YP_406123.1;transl_table=11
NC_007607.1	RefSeq	gene	100659	101351	.	+	.	ID=gene4732;Dbxref=GeneID:3776679;Name=SDY_P123;Note=SDYP123;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P123
NC_007607.1	RefSeq	CDS	100659	101351	.	+	0	ID=cds4192;Parent=gene4732;Dbxref=Genbank:YP_406124.1,GeneID:3776679;Name=YP_406124.1;gbkey=CDS;product=putative DNA helicase I%2C fragment;protein_id=YP_406124.1;transl_table=11
NC_007607.1	RefSeq	gene	101371	102117	.	+	.	ID=gene4733;Dbxref=GeneID:3776680;Name=traX;Note=SDYP124;gbkey=Gene;gene=traX;gene_biotype=protein_coding;locus_tag=SDY_P124
NC_007607.1	RefSeq	CDS	101371	102117	.	+	0	ID=cds4193;Parent=gene4733;Dbxref=Genbank:YP_406125.1,GeneID:3776680;Name=YP_406125.1;gbkey=CDS;gene=traX;product=conjugal transfer pilus acetylation protein TraX;protein_id=YP_406125.1;transl_table=11
NC_007607.1	RefSeq	gene	102172	102732	.	+	.	ID=gene4734;Dbxref=GeneID:3776681;Name=finO;Note=SDYP125;gbkey=Gene;gene=finO;gene_biotype=protein_coding;locus_tag=SDY_P125
NC_007607.1	RefSeq	CDS	102172	102732	.	+	0	ID=cds4194;Parent=gene4734;Dbxref=Genbank:YP_406126.1,GeneID:3776681;Name=YP_406126.1;gbkey=CDS;gene=finO;product=conjugal transfer fertility inhibition protein FinO;protein_id=YP_406126.1;transl_table=11
NC_007607.1	RefSeq	gene	102863	103075	.	+	.	ID=gene4735;Dbxref=GeneID:3776682;Name=yigA;Note=SDYP126;gbkey=Gene;gene=yigA;gene_biotype=protein_coding;locus_tag=SDY_P126
NC_007607.1	RefSeq	CDS	102863	103075	.	+	0	ID=cds4195;Parent=gene4735;Dbxref=Genbank:YP_406127.1,GeneID:3776682;Name=YP_406127.1;gbkey=CDS;gene=yigA;product=hypothetical protein;protein_id=YP_406127.1;transl_table=11
NC_007607.1	RefSeq	gene	103259	103561	.	+	.	ID=gene4736;Dbxref=GeneID:3776683;Name=SDY_P127;Note=SDYP127;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P127
NC_007607.1	RefSeq	CDS	103259	103561	.	+	0	ID=cds4196;Parent=gene4736;Dbxref=Genbank:YP_406128.1,GeneID:3776683;Name=YP_406128.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406128.1;transl_table=11
NC_007607.1	RefSeq	region	103481	104247	.	-	.	ID=id788;gbkey=mobile_element
NC_007607.1	RefSeq	gene	103496	103741	.	-	.	ID=gene4737;Dbxref=GeneID:3776684;Name=insB;Note=SDYP128;gbkey=Gene;gene=insB;gene_biotype=protein_coding;locus_tag=SDY_P128
NC_007607.1	RefSeq	CDS	103496	103741	.	-	0	ID=cds4197;Parent=gene4737;Dbxref=Genbank:YP_406129.1,GeneID:3776684;Name=YP_406129.1;gbkey=CDS;gene=insB;product=IS1 ORF2;protein_id=YP_406129.1;transl_table=11
NC_007607.1	RefSeq	gene	104009	104221	.	-	.	ID=gene4738;Dbxref=GeneID:3776685;Name=SDY_P129;Note=SDYP129;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P129
NC_007607.1	RefSeq	CDS	104009	104221	.	-	0	ID=cds4198;Parent=gene4738;Dbxref=Genbank:YP_406130.1,GeneID:3776685;Name=YP_406130.1;gbkey=CDS;product=putative iso-IS1 orf;protein_id=YP_406130.1;transl_table=11
NC_007607.1	RefSeq	gene	104290	104520	.	+	.	ID=gene4739;Dbxref=GeneID:3776612;Name=SDY_P130;Note=SDYP130;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P130
NC_007607.1	RefSeq	CDS	104290	104520	.	+	0	ID=cds4199;Parent=gene4739;Dbxref=Genbank:YP_406131.1,GeneID:3776612;Name=YP_406131.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406131.1;transl_table=11
NC_007607.1	RefSeq	gene	104623	104811	.	+	.	ID=gene4740;Dbxref=GeneID:3776613;Name=hmo;Note=SDYP131;gbkey=Gene;gene=hmo;gene_biotype=protein_coding;locus_tag=SDY_P131
NC_007607.1	RefSeq	CDS	104623	104811	.	+	0	ID=cds4200;Parent=gene4740;Dbxref=Genbank:YP_406132.1,GeneID:3776613;Name=YP_406132.1;gbkey=CDS;gene=hmo;product=putative regulator;protein_id=YP_406132.1;transl_table=11
NC_007607.1	RefSeq	gene	104850	104963	.	+	.	ID=gene4741;Dbxref=GeneID:3776614;Name=SDY_P132;Note=SDYP132;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P132
NC_007607.1	RefSeq	CDS	104850	104963	.	+	0	ID=cds4201;Parent=gene4741;Dbxref=Genbank:YP_406133.1,GeneID:3776614;Name=YP_406133.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406133.1;transl_table=11
NC_007607.1	RefSeq	region	104946	105711	.	-	.	ID=id789;gbkey=mobile_element
NC_007607.1	RefSeq	gene	104960	105355	.	-	.	ID=gene4742;Dbxref=GeneID:3776615;Name=SDY_P133;Note=SDYP133;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P133
NC_007607.1	RefSeq	CDS	104960	105355	.	-	0	ID=cds4202;Parent=gene4742;Dbxref=Genbank:YP_406134.1,GeneID:3776615;Name=YP_406134.1;gbkey=CDS;product=iso-IS1 ORF2;protein_id=YP_406134.1;transl_table=11
NC_007607.1	RefSeq	gene	105382	105654	.	-	.	ID=gene4743;Dbxref=GeneID:3776616;Name=SDY_P134;Note=SDYP134;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P134
NC_007607.1	RefSeq	CDS	105382	105654	.	-	0	ID=cds4203;Parent=gene4743;Dbxref=Genbank:YP_406135.1,GeneID:3776616;Name=YP_406135.1;gbkey=CDS;product=iso-IS1 ORF1;protein_id=YP_406135.1;transl_table=11
NC_007607.1	RefSeq	gene	105714	106214	.	+	.	ID=gene4744;Dbxref=GeneID:3776617;Name=yihA;Note=SDYP135;gbkey=Gene;gene=yihA;gene_biotype=protein_coding;locus_tag=SDY_P135
NC_007607.1	RefSeq	CDS	105714	106214	.	+	0	ID=cds4204;Parent=gene4744;Dbxref=Genbank:YP_406136.1,GeneID:3776617;Name=YP_406136.1;gbkey=CDS;gene=yihA;product=hypothetical protein;protein_id=YP_406136.1;transl_table=11
NC_007607.1	RefSeq	gene	106454	106714	.	+	.	ID=gene4745;Dbxref=GeneID:3776618;Name=repB;Note=SDYP136;gbkey=Gene;gene=repB;gene_biotype=protein_coding;locus_tag=SDY_P136
NC_007607.1	RefSeq	CDS	106454	106714	.	+	0	ID=cds4205;Parent=gene4745;Dbxref=Genbank:YP_406137.1,GeneID:3776618;Name=YP_406137.1;gbkey=CDS;gene=repB;product=replication protein;protein_id=YP_406137.1;transl_table=11
NC_007607.1	RefSeq	gene	107005	107862	.	+	.	ID=gene4746;Dbxref=GeneID:3776619;Name=repA;Note=SDYP137;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=SDY_P137
NC_007607.1	RefSeq	CDS	107005	107862	.	+	0	ID=cds4206;Parent=gene4746;Dbxref=Genbank:YP_406138.1,GeneID:3776619;Name=YP_406138.1;Note=RepA;gbkey=CDS;gene=repA;product=replication protein;protein_id=YP_406138.1;transl_table=11
NC_007607.1	RefSeq	gene	108605	108700	.	+	.	ID=gene4747;Dbxref=GeneID:3776620;Name=SDY_P138;Note=SDYP138;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P138
NC_007607.1	RefSeq	CDS	108605	108700	.	+	0	ID=cds4207;Parent=gene4747;Dbxref=Genbank:YP_406139.1,GeneID:3776620;Name=YP_406139.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406139.1;transl_table=11
NC_007607.1	RefSeq	region	108801	110153	.	-	.	ID=id790;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	108972	110180	.	-	.	ID=gene4748;Dbxref=GeneID:3776621;Name=SDY_P139;Note=SDYP139;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P139
NC_007607.1	RefSeq	CDS	108972	110180	.	-	0	ID=cds4208;Parent=gene4748;Dbxref=Genbank:YP_406140.1,GeneID:3776621;Name=YP_406140.1;gbkey=CDS;product=IS1294 transposase;protein_id=YP_406140.1;transl_table=11
NC_007607.1	RefSeq	gene	110161	110433	.	-	.	ID=gene4749;Dbxref=GeneID:3776623;Name=SDY_P141;Note=SDYP141;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P141
NC_007607.1	RefSeq	CDS	110161	110433	.	-	0	ID=cds4209;Parent=gene4749;Dbxref=Genbank:YP_406141.1,GeneID:3776623;Name=YP_406141.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406141.1;transl_table=11
NC_007607.1	RefSeq	gene	110427	111971	.	+	.	ID=gene4750;Dbxref=GeneID:3776622;Name=ipaH;Note=SDYP140;gbkey=Gene;gene=ipaH;gene_biotype=protein_coding;locus_tag=SDY_P140
NC_007607.1	RefSeq	CDS	110427	111971	.	+	0	ID=cds4210;Parent=gene4750;Dbxref=Genbank:YP_406142.1,GeneID:3776622;Name=YP_406142.1;gbkey=CDS;gene=ipaH;product=invasion plasmid antigen%2C fragment;protein_id=YP_406142.1;transl_table=11
NC_007607.1	RefSeq	region	111297	112013	.	+	.	ID=id791;Note=fragment;gbkey=mobile_element;gene=ipaH
NC_007607.1	RefSeq	gene	112011	112199	.	-	.	ID=gene4751;Dbxref=GeneID:3776624;Name=SDY_P142;Note=SDYP142;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P142
NC_007607.1	RefSeq	CDS	112011	112199	.	-	0	ID=cds4211;Parent=gene4751;Dbxref=Genbank:YP_406143.1,GeneID:3776624;Name=YP_406143.1;gbkey=CDS;product=IS600 ORF2;protein_id=YP_406143.1;transl_table=11
NC_007607.1	RefSeq	region	112014	112601	.	-	.	ID=id792;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	112235	112537	.	-	.	ID=gene4752;Dbxref=GeneID:3776625;Name=SDY_P143;Note=SDYP143;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P143
NC_007607.1	RefSeq	CDS	112235	112537	.	-	0	ID=cds4212;Parent=gene4752;Dbxref=Genbank:YP_406144.1,GeneID:3776625;Name=YP_406144.1;gbkey=CDS;product=IS600 ORF1;protein_id=YP_406144.1;transl_table=11
NC_007607.1	RefSeq	gene	112605	113087	.	-	.	ID=gene4753;Dbxref=GeneID:3776626;Name=SDY_P144;Note=SDYP144;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P144
NC_007607.1	RefSeq	CDS	112605	113087	.	-	0	ID=cds4213;Parent=gene4753;Dbxref=Genbank:YP_406145.1,GeneID:3776626;Name=YP_406145.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406145.1;transl_table=11
NC_007607.1	RefSeq	gene	113078	113368	.	-	.	ID=gene4754;Dbxref=GeneID:3776627;Name=SDY_P145;Note=SDYP145;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P145
NC_007607.1	RefSeq	CDS	113078	113368	.	-	0	ID=cds4214;Parent=gene4754;Dbxref=Genbank:YP_406146.1,GeneID:3776627;Name=YP_406146.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406146.1;transl_table=11
NC_007607.1	RefSeq	region	113728	114509	.	-	.	ID=id793;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	113794	114456	.	-	.	ID=gene4755;Dbxref=GeneID:3776628;Name=SDY_P146;Note=SDYP146;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P146
NC_007607.1	RefSeq	CDS	113794	114456	.	-	0	ID=cds4215;Parent=gene4755;Dbxref=Genbank:YP_406147.1,GeneID:3776628;Name=YP_406147.1;gbkey=CDS;product=transposase/IS protein;protein_id=YP_406147.1;transl_table=11
NC_007607.1	RefSeq	gene	114511	115803	.	-	.	ID=gene4756;Dbxref=GeneID:3776629;Name=SDY_P147;Note=SDYP147;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P147
NC_007607.1	RefSeq	CDS	114511	115803	.	-	0	ID=cds4216;Parent=gene4756;Dbxref=Genbank:YP_406148.1,GeneID:3776629;Name=YP_406148.1;gbkey=CDS;product=IS1294 transposase;protein_id=YP_406148.1;transl_table=11
NC_007607.1	RefSeq	region	114660	115776	.	-	.	ID=id794;Dbxref=GeneID:3776629;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	115784	116056	.	-	.	ID=gene4757;Dbxref=GeneID:3776630;Name=SDY_P148;Note=SDYP148;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P148
NC_007607.1	RefSeq	CDS	115784	116056	.	-	0	ID=cds4217;Parent=gene4757;Dbxref=Genbank:YP_406149.1,GeneID:3776630;Name=YP_406149.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406149.1;transl_table=11
NC_007607.1	RefSeq	gene	116076	116663	.	-	.	ID=gene4758;Dbxref=GeneID:3776686;Name=SDY_P149;Note=SDYP149;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P149
NC_007607.1	RefSeq	CDS	116076	116663	.	-	0	ID=cds4218;Parent=gene4758;Dbxref=Genbank:YP_406150.1,GeneID:3776686;Name=YP_406150.1;gbkey=CDS;product=ISSfl4 ORF1;protein_id=YP_406150.1;transl_table=11
NC_007607.1	RefSeq	region	116137	116745	.	+	.	ID=id795;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	116800	116973	.	-	.	ID=gene4759;Dbxref=GeneID:3776687;Name=SDY_P150;Note=SDYP150;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P150
NC_007607.1	RefSeq	CDS	116800	116973	.	-	0	ID=cds4219;Parent=gene4759;Dbxref=Genbank:YP_406151.1,GeneID:3776687;Name=YP_406151.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406151.1;transl_table=11
NC_007607.1	RefSeq	gene	117314	118768	.	+	.	ID=gene4760;Dbxref=GeneID:3776688;Name=ospC3;Note=SDYP151;gbkey=Gene;gene=ospC3;gene_biotype=protein_coding;locus_tag=SDY_P151
NC_007607.1	RefSeq	CDS	117314	118768	.	+	0	ID=cds4220;Parent=gene4760;Dbxref=Genbank:YP_406152.1,GeneID:3776688;Name=YP_406152.1;gbkey=CDS;gene=ospC3;product=OspC3;protein_id=YP_406152.1;transl_table=11
NC_007607.1	RefSeq	region	119043	120306	.	+	.	ID=id796;gbkey=mobile_element
NC_007607.1	RefSeq	gene	119107	119409	.	+	.	ID=gene4761;Dbxref=GeneID:3776689;Name=SDY_P152;Note=SDYP152;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P152
NC_007607.1	RefSeq	CDS	119107	119409	.	+	0	ID=cds4221;Parent=gene4761;Dbxref=Genbank:YP_406153.1,GeneID:3776689;Name=YP_406153.1;gbkey=CDS;product=IS600 ORF1;protein_id=YP_406153.1;transl_table=11
NC_007607.1	RefSeq	gene	119550	120263	.	+	.	ID=gene4762;Dbxref=GeneID:3776557;Name=SDY_P153;Note=SDYP153;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P153
NC_007607.1	RefSeq	CDS	119550	120263	.	+	0	ID=cds4222;Parent=gene4762;Dbxref=Genbank:YP_406154.1,GeneID:3776557;Name=YP_406154.1;gbkey=CDS;product=IS600 ORF2;protein_id=YP_406154.1;transl_table=11
NC_007607.1	RefSeq	gene	120388	120630	.	+	.	ID=gene4763;Dbxref=GeneID:3776558;Name=SDY_P154;Note=SDYP154;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P154
NC_007607.1	RefSeq	CDS	120388	120630	.	+	0	ID=cds4223;Parent=gene4763;Dbxref=Genbank:YP_406155.1,GeneID:3776558;Name=YP_406155.1;gbkey=CDS;product=IS1353 transposase;protein_id=YP_406155.1;transl_table=11
NC_007607.1	RefSeq	gene	120685	121038	.	+	.	ID=gene4764;Dbxref=GeneID:3776559;Name=SDY_P155;Note=SDYP155;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P155
NC_007607.1	RefSeq	CDS	120685	121038	.	+	0	ID=cds4224;Parent=gene4764;Dbxref=Genbank:YP_406156.1,GeneID:3776559;Name=YP_406156.1;gbkey=CDS;product=IS1353 transposase;protein_id=YP_406156.1;transl_table=11
NC_007607.1	RefSeq	region	121221	121555	.	+	.	ID=id797;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	121228	122343	.	+	.	ID=gene4765;Dbxref=GeneID:3776560;Name=SDY_P156;Note=SDYP156;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P156
NC_007607.1	RefSeq	CDS	121228	122343	.	+	0	ID=cds4225;Parent=gene4765;Dbxref=Genbank:YP_406157.1,GeneID:3776560;Name=YP_406157.1;gbkey=CDS;product=putative transposase;protein_id=YP_406157.1;transl_table=11
NC_007607.1	RefSeq	region	122402	123774	.	+	.	ID=id798;gbkey=mobile_element
NC_007607.1	RefSeq	gene	122432	123628	.	-	.	ID=gene4766;Dbxref=GeneID:3776562;Name=SDY_P158;Note=SDYP158;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P158
NC_007607.1	RefSeq	CDS	122432	123628	.	-	0	ID=cds4226;Parent=gene4766;Dbxref=Genbank:YP_406159.1,GeneID:3776562;Name=YP_406159.1;gbkey=CDS;product=ISSfl2 ORF;protein_id=YP_406159.1;transl_table=11
NC_007607.1	RefSeq	gene	123820	124746	.	-	.	ID=gene4767;Dbxref=GeneID:3776563;Name=SDY_P159;Note=SDYP159;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P159
NC_007607.1	RefSeq	CDS	123820	124746	.	-	0	ID=cds4227;Parent=gene4767;Dbxref=Genbank:YP_406160.1,GeneID:3776563;Name=YP_406160.1;gbkey=CDS;product=IS100 ORF1;protein_id=YP_406160.1;transl_table=11
NC_007607.1	RefSeq	region	123860	124900	.	-	.	ID=id799;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	126261	126944	.	+	.	ID=gene4768;Dbxref=GeneID:3776564;Name=ipaJ;Note=SDYP160;gbkey=Gene;gene=ipaJ;gene_biotype=protein_coding;locus_tag=SDY_P160
NC_007607.1	RefSeq	CDS	126261	126944	.	+	0	ID=cds4228;Parent=gene4768;Dbxref=Genbank:YP_406161.1,GeneID:3776564;Name=YP_406161.1;gbkey=CDS;gene=ipaJ;product=IpaJ;protein_id=YP_406161.1;transl_table=11
NC_007607.1	RefSeq	gene	127894	128823	.	-	.	ID=gene4769;Dbxref=GeneID:3776565;Name=virB;Note=SDYP161;gbkey=Gene;gene=virB;gene_biotype=protein_coding;locus_tag=SDY_P161
NC_007607.1	RefSeq	CDS	127894	128823	.	-	0	ID=cds4229;Parent=gene4769;Dbxref=Genbank:YP_406162.1,GeneID:3776565;Name=YP_406162.1;gbkey=CDS;gene=virB;product=VirB;protein_id=YP_406162.1;transl_table=11
NC_007607.1	RefSeq	gene	129030	129266	.	-	.	ID=gene4770;Dbxref=GeneID:3776566;Name=acp;Note=SDYP162;gbkey=Gene;gene=acp;gene_biotype=protein_coding;locus_tag=SDY_P162
NC_007607.1	RefSeq	CDS	129030	129266	.	-	0	ID=cds4230;Parent=gene4770;Dbxref=Genbank:YP_406163.1,GeneID:3776566;Name=YP_406163.1;gbkey=CDS;gene=acp;product=Acp;protein_id=YP_406163.1;transl_table=11
NC_007607.1	RefSeq	gene	129270	131171	.	-	.	ID=gene4771;Dbxref=GeneID:3776567;Name=ipaA;Note=SDYP163;gbkey=Gene;gene=ipaA;gene_biotype=protein_coding;locus_tag=SDY_P163
NC_007607.1	RefSeq	CDS	129270	131171	.	-	0	ID=cds4231;Parent=gene4771;Dbxref=Genbank:YP_406164.1,GeneID:3776567;Name=YP_406164.1;gbkey=CDS;gene=ipaA;product=IpaA;protein_id=YP_406164.1;transl_table=11
NC_007607.1	RefSeq	gene	131180	132178	.	-	.	ID=gene4772;Dbxref=GeneID:3776568;Name=ipaD;Note=SDYP164;gbkey=Gene;gene=ipaD;gene_biotype=protein_coding;locus_tag=SDY_P164
NC_007607.1	RefSeq	CDS	131180	132178	.	-	0	ID=cds4232;Parent=gene4772;Dbxref=Genbank:YP_406165.1,GeneID:3776568;Name=YP_406165.1;gbkey=CDS;gene=ipaD;product=IpaD;protein_id=YP_406165.1;transl_table=11
NC_007607.1	RefSeq	gene	132229	133320	.	-	.	ID=gene4773;Dbxref=GeneID:3776569;Name=ipaC;Note=SDYP165;gbkey=Gene;gene=ipaC;gene_biotype=protein_coding;locus_tag=SDY_P165
NC_007607.1	RefSeq	CDS	132229	133320	.	-	0	ID=cds4233;Parent=gene4773;Dbxref=Genbank:YP_406166.1,GeneID:3776569;Name=YP_406166.1;gbkey=CDS;gene=ipaC;product=IpaC;protein_id=YP_406166.1;transl_table=11
NC_007607.1	RefSeq	gene	133340	135082	.	-	.	ID=gene4774;Dbxref=GeneID:3776570;Name=ipaB;Note=SDYP166;gbkey=Gene;gene=ipaB;gene_biotype=protein_coding;locus_tag=SDY_P166
NC_007607.1	RefSeq	CDS	133340	135082	.	-	0	ID=cds4234;Parent=gene4774;Dbxref=Genbank:YP_406167.1,GeneID:3776570;Name=YP_406167.1;gbkey=CDS;gene=ipaB;product=IpaB;protein_id=YP_406167.1;transl_table=11
NC_007607.1	RefSeq	gene	135088	135555	.	-	.	ID=gene4775;Dbxref=GeneID:3776571;Name=ipgC;Note=SDYP167;gbkey=Gene;gene=ipgC;gene_biotype=protein_coding;locus_tag=SDY_P167
NC_007607.1	RefSeq	CDS	135088	135555	.	-	0	ID=cds4235;Parent=gene4775;Dbxref=Genbank:YP_406168.1,GeneID:3776571;Name=YP_406168.1;gbkey=CDS;gene=ipgC;product=IpgC;protein_id=YP_406168.1;transl_table=11
NC_007607.1	RefSeq	gene	135613	136239	.	-	.	ID=gene4776;Dbxref=GeneID:3776572;Name=ipgB1;Note=SDYP168;gbkey=Gene;gene=ipgB1;gene_biotype=protein_coding;locus_tag=SDY_P168
NC_007607.1	RefSeq	CDS	135613	136239	.	-	0	ID=cds4236;Parent=gene4776;Dbxref=Genbank:YP_406169.1,GeneID:3776572;Name=YP_406169.1;gbkey=CDS;gene=ipgB1;product=IpgB1;protein_id=YP_406169.1;transl_table=11
NC_007607.1	RefSeq	gene	136255	136644	.	-	.	ID=gene4777;Dbxref=GeneID:3776525;Name=ipgA;Note=SDYP169;gbkey=Gene;gene=ipgA;gene_biotype=protein_coding;locus_tag=SDY_P169
NC_007607.1	RefSeq	CDS	136255	136644	.	-	0	ID=cds4237;Parent=gene4777;Dbxref=Genbank:YP_406170.1,GeneID:3776525;Name=YP_406170.1;gbkey=CDS;gene=ipgA;product=IpgA;protein_id=YP_406170.1;transl_table=11
NC_007607.1	RefSeq	gene	136657	138141	.	-	.	ID=gene4778;Dbxref=GeneID:3776526;Name=icsB;Note=SDYP170;gbkey=Gene;gene=icsB;gene_biotype=protein_coding;locus_tag=SDY_P170
NC_007607.1	RefSeq	CDS	136657	138141	.	-	0	ID=cds4238;Parent=gene4778;Dbxref=Genbank:YP_406171.1,GeneID:3776526;Name=YP_406171.1;gbkey=CDS;gene=icsB;product=IcsB;protein_id=YP_406171.1;transl_table=11
NC_007607.1	RefSeq	gene	138455	140071	.	+	.	ID=gene4779;Dbxref=GeneID:3776527;Name=ipgD;Note=SDYP171;gbkey=Gene;gene=ipgD;gene_biotype=protein_coding;locus_tag=SDY_P171
NC_007607.1	RefSeq	CDS	138455	140071	.	+	0	ID=cds4239;Parent=gene4779;Dbxref=Genbank:YP_406172.1,GeneID:3776527;Name=YP_406172.1;gbkey=CDS;gene=ipgD;product=IpgD;protein_id=YP_406172.1;transl_table=11
NC_007607.1	RefSeq	gene	140081	140443	.	+	.	ID=gene4780;Dbxref=GeneID:3776528;Name=ipgE;Note=SDYP172;gbkey=Gene;gene=ipgE;gene_biotype=protein_coding;locus_tag=SDY_P172
NC_007607.1	RefSeq	CDS	140081	140443	.	+	0	ID=cds4240;Parent=gene4780;Dbxref=Genbank:YP_406173.1,GeneID:3776528;Name=YP_406173.1;gbkey=CDS;gene=ipgE;product=IpgE;protein_id=YP_406173.1;transl_table=11
NC_007607.1	RefSeq	gene	140443	140901	.	+	.	ID=gene4781;Dbxref=GeneID:3776529;Name=ipgF;Note=SDYP173;gbkey=Gene;gene=ipgF;gene_biotype=protein_coding;locus_tag=SDY_P173
NC_007607.1	RefSeq	CDS	140443	140901	.	+	0	ID=cds4241;Parent=gene4781;Dbxref=Genbank:YP_406174.1,GeneID:3776529;Name=YP_406174.1;gbkey=CDS;gene=ipgF;product=IpgF;protein_id=YP_406174.1;transl_table=11
NC_007607.1	RefSeq	gene	140910	142025	.	+	.	ID=gene4782;Dbxref=GeneID:3776530;Name=mxiG;Note=SDYP174;gbkey=Gene;gene=mxiG;gene_biotype=protein_coding;locus_tag=SDY_P174
NC_007607.1	RefSeq	CDS	140910	142025	.	+	0	ID=cds4242;Parent=gene4782;Dbxref=Genbank:YP_406175.1,GeneID:3776530;Name=YP_406175.1;gbkey=CDS;gene=mxiG;product=MxiG;protein_id=YP_406175.1;transl_table=11
NC_007607.1	RefSeq	gene	142033	142284	.	+	.	ID=gene4783;Dbxref=GeneID:3776531;Name=mxiH;Note=SDYP175;gbkey=Gene;gene=mxiH;gene_biotype=protein_coding;locus_tag=SDY_P175
NC_007607.1	RefSeq	CDS	142033	142284	.	+	0	ID=cds4243;Parent=gene4783;Dbxref=Genbank:YP_406176.1,GeneID:3776531;Name=YP_406176.1;gbkey=CDS;gene=mxiH;product=MxiH;protein_id=YP_406176.1;transl_table=11
NC_007607.1	RefSeq	gene	142297	142590	.	+	.	ID=gene4784;Dbxref=GeneID:3776532;Name=mxiI;Note=SDYP176;gbkey=Gene;gene=mxiI;gene_biotype=protein_coding;locus_tag=SDY_P176
NC_007607.1	RefSeq	CDS	142297	142590	.	+	0	ID=cds4244;Parent=gene4784;Dbxref=Genbank:YP_406177.1,GeneID:3776532;Name=YP_406177.1;gbkey=CDS;gene=mxiI;product=MxiI;protein_id=YP_406177.1;transl_table=11
NC_007607.1	RefSeq	gene	142596	143321	.	+	.	ID=gene4785;Dbxref=GeneID:3776533;Name=mxiJ;Note=SDYP177;gbkey=Gene;gene=mxiJ;gene_biotype=protein_coding;locus_tag=SDY_P177
NC_007607.1	RefSeq	CDS	142596	143321	.	+	0	ID=cds4245;Parent=gene4785;Dbxref=Genbank:YP_406178.1,GeneID:3776533;Name=YP_406178.1;gbkey=CDS;gene=mxiJ;product=MxiJ;protein_id=YP_406178.1;transl_table=11
NC_007607.1	RefSeq	gene	143327	143845	.	+	.	ID=gene4786;Dbxref=GeneID:3776534;Name=mxiK;Note=SDYP178;gbkey=Gene;gene=mxiK;gene_biotype=protein_coding;locus_tag=SDY_P178
NC_007607.1	RefSeq	CDS	143327	143845	.	+	0	ID=cds4246;Parent=gene4786;Dbxref=Genbank:YP_406179.1,GeneID:3776534;Name=YP_406179.1;gbkey=CDS;gene=mxiK;product=MxiK;protein_id=YP_406179.1;transl_table=11
NC_007607.1	RefSeq	gene	143787	144482	.	+	.	ID=gene4787;Dbxref=GeneID:3776535;Name=mxiN;Note=SDYP179;gbkey=Gene;gene=mxiN;gene_biotype=protein_coding;locus_tag=SDY_P179
NC_007607.1	RefSeq	CDS	143787	144482	.	+	0	ID=cds4247;Parent=gene4787;Dbxref=Genbank:YP_406180.1,GeneID:3776535;Name=YP_406180.1;gbkey=CDS;gene=mxiN;product=MxiN;protein_id=YP_406180.1;transl_table=11
NC_007607.1	RefSeq	gene	144475	144882	.	+	.	ID=gene4788;Dbxref=GeneID:3776536;Name=mxiL;Note=SDYP180;gbkey=Gene;gene=mxiL;gene_biotype=protein_coding;locus_tag=SDY_P180
NC_007607.1	RefSeq	CDS	144475	144882	.	+	0	ID=cds4248;Parent=gene4788;Dbxref=Genbank:YP_406181.1,GeneID:3776536;Name=YP_406181.1;gbkey=CDS;gene=mxiL;product=MxiL;protein_id=YP_406181.1;transl_table=11
NC_007607.1	RefSeq	gene	144866	145294	.	+	.	ID=gene4789;Dbxref=GeneID:3776537;Name=mxiM;Note=SDYP181;gbkey=Gene;gene=mxiM;gene_biotype=protein_coding;locus_tag=SDY_P181
NC_007607.1	RefSeq	CDS	144866	145294	.	+	0	ID=cds4249;Parent=gene4789;Dbxref=Genbank:YP_406182.1,GeneID:3776537;Name=YP_406182.1;gbkey=CDS;gene=mxiM;product=MxiM;protein_id=YP_406182.1;transl_table=11
NC_007607.1	RefSeq	gene	145424	146056	.	+	.	ID=gene4790;Dbxref=GeneID:3776538;Name=mxiE;Note=SDYP182;gbkey=Gene;gene=mxiE;gene_biotype=protein_coding;locus_tag=SDY_P182
NC_007607.1	RefSeq	CDS	145424	146056	.	+	0	ID=cds4250;Parent=gene4790;Dbxref=Genbank:YP_406183.1,GeneID:3776538;Name=YP_406183.1;gbkey=CDS;gene=mxiE;product=MxiE;protein_id=YP_406183.1;transl_table=11
NC_007607.1	RefSeq	gene	146043	147743	.	+	.	ID=gene4791;Dbxref=GeneID:3776539;Name=mxiD;Note=SDYP183;gbkey=Gene;gene=mxiD;gene_biotype=protein_coding;locus_tag=SDY_P183
NC_007607.1	RefSeq	CDS	146043	147743	.	+	0	ID=cds4251;Parent=gene4791;Dbxref=Genbank:YP_406184.1,GeneID:3776539;Name=YP_406184.1;gbkey=CDS;gene=mxiD;product=MxiD;protein_id=YP_406184.1;transl_table=11
NC_007607.1	RefSeq	gene	147822	148829	.	+	.	ID=gene4792;Dbxref=GeneID:3776540;Name=mxiC;Note=SDYP184;gbkey=Gene;gene=mxiC;gene_biotype=protein_coding;locus_tag=SDY_P184
NC_007607.1	RefSeq	CDS	147822	148829	.	+	0	ID=cds4252;Parent=gene4792;Dbxref=Genbank:YP_406185.1,GeneID:3776540;Name=YP_406185.1;gbkey=CDS;gene=mxiC;product=MxiC;protein_id=YP_406185.1;transl_table=11
NC_007607.1	RefSeq	gene	148836	150902	.	+	.	ID=gene4793;Dbxref=GeneID:3776541;Name=mxiA;Note=SDYP185;gbkey=Gene;gene=mxiA;gene_biotype=protein_coding;locus_tag=SDY_P185
NC_007607.1	RefSeq	CDS	148836	150902	.	+	0	ID=cds4253;Parent=gene4793;Dbxref=Genbank:YP_406186.1,GeneID:3776541;Name=YP_406186.1;gbkey=CDS;gene=mxiA;product=MxiA;protein_id=YP_406186.1;transl_table=11
NC_007607.1	RefSeq	gene	150915	151316	.	+	.	ID=gene4794;Dbxref=GeneID:3776542;Name=spa15;Note=SDYP186;gbkey=Gene;gene=spa15;gene_biotype=protein_coding;locus_tag=SDY_P186
NC_007607.1	RefSeq	CDS	150915	151316	.	+	0	ID=cds4254;Parent=gene4794;Dbxref=Genbank:YP_406187.1,GeneID:3776542;Name=YP_406187.1;gbkey=CDS;gene=spa15;product=Spa15;protein_id=YP_406187.1;transl_table=11
NC_007607.1	RefSeq	gene	151320	152612	.	+	.	ID=gene4795;Dbxref=GeneID:3776543;Name=spa47;Note=SDYP187;gbkey=Gene;gene=spa47;gene_biotype=protein_coding;locus_tag=SDY_P187
NC_007607.1	RefSeq	CDS	151320	152612	.	+	0	ID=cds4255;Parent=gene4795;Dbxref=Genbank:YP_406188.1,GeneID:3776543;Name=YP_406188.1;Note=Invasion protein InvC%3B necessary for efficient entry of S.typhimurium into cultured epithelial cells. Probable catalytic subunit of a protein translocase;gbkey=CDS;gene=spa47;product=ATP synthase SpaL;protein_id=YP_406188.1;transl_table=11
NC_007607.1	RefSeq	gene	152756	153043	.	+	.	ID=gene4796;Dbxref=GeneID:3776505;Name=spa13;Note=SDYP188;gbkey=Gene;gene=spa13;gene_biotype=protein_coding;locus_tag=SDY_P188
NC_007607.1	RefSeq	CDS	152756	153043	.	+	0	ID=cds4256;Parent=gene4796;Dbxref=Genbank:YP_406189.1,GeneID:3776505;Name=YP_406189.1;gbkey=CDS;gene=spa13;product=Spa13;protein_id=YP_406189.1;transl_table=11
NC_007607.1	RefSeq	gene	153030	153908	.	+	.	ID=gene4797;Dbxref=GeneID:3776506;Name=spa32;Note=SDYP189;gbkey=Gene;gene=spa32;gene_biotype=protein_coding;locus_tag=SDY_P189
NC_007607.1	RefSeq	CDS	153030	153908	.	+	0	ID=cds4257;Parent=gene4797;Dbxref=Genbank:YP_406190.1,GeneID:3776506;Name=YP_406190.1;gbkey=CDS;gene=spa32;product=Spa32;protein_id=YP_406190.1;transl_table=11
NC_007607.1	RefSeq	gene	153902	154783	.	+	.	ID=gene4798;Dbxref=GeneID:3776507;Name=spa33;Note=SDYP190;gbkey=Gene;gene=spa33;gene_biotype=protein_coding;locus_tag=SDY_P190
NC_007607.1	RefSeq	CDS	153902	154783	.	+	0	ID=cds4258;Parent=gene4798;Dbxref=Genbank:YP_406191.1,GeneID:3776507;Name=YP_406191.1;gbkey=CDS;gene=spa33;product=Spa33;protein_id=YP_406191.1;transl_table=11
NC_007607.1	RefSeq	gene	154788	155438	.	+	.	ID=gene4799;Dbxref=GeneID:3776508;Name=spaP;Note=SDYP191;gbkey=Gene;gene=spaP;gene_biotype=protein_coding;locus_tag=SDY_P191
NC_007607.1	RefSeq	CDS	154788	155438	.	+	0	ID=cds4259;Parent=gene4799;Dbxref=Genbank:YP_406192.1,GeneID:3776508;Name=YP_406192.1;Note=part of a type III secretory system probably involved in invasion into eukaryotic cells;gbkey=CDS;gene=spaP;product=surface presentation of antigens protein SpaP;protein_id=YP_406192.1;transl_table=11
NC_007607.1	RefSeq	gene	155453	155713	.	+	.	ID=gene4800;Dbxref=GeneID:5563324;Name=spa9;gbkey=Gene;gene=spa9;gene_biotype=protein_coding;locus_tag=SDY_P191a
NC_007607.1	RefSeq	CDS	155453	155713	.	+	0	ID=cds4260;Parent=gene4800;Dbxref=Genbank:YP_001449235.1,GeneID:5563324;Name=YP_001449235.1;gbkey=CDS;gene=spa9;product=Spa9;protein_id=YP_001449235.1;transl_table=11
NC_007607.1	RefSeq	gene	155713	156483	.	+	.	ID=gene4801;Dbxref=GeneID:3776509;Name=spa29;Note=SDYP192;gbkey=Gene;gene=spa29;gene_biotype=protein_coding;locus_tag=SDY_P192
NC_007607.1	RefSeq	CDS	155713	156483	.	+	0	ID=cds4261;Parent=gene4801;Dbxref=Genbank:YP_406193.1,GeneID:3776509;Name=YP_406193.1;gbkey=CDS;gene=spa29;product=Spa29;protein_id=YP_406193.1;transl_table=11
NC_007607.1	RefSeq	gene	156490	157518	.	+	.	ID=gene4802;Dbxref=GeneID:3776510;Name=spa40;Note=SDYP193;gbkey=Gene;gene=spa40;gene_biotype=protein_coding;locus_tag=SDY_P193
NC_007607.1	RefSeq	CDS	156490	157518	.	+	0	ID=cds4262;Parent=gene4802;Dbxref=Genbank:YP_406194.1,GeneID:3776510;Name=YP_406194.1;Note=Required for surface presentation of invasion plasmid antigens%3B required for invasion and for secretion of the three ipa proteins;gbkey=CDS;gene=spa40;product=surface presentation of antigens protein SpaS;protein_id=YP_406194.1;transl_table=11
NC_007607.1	RefSeq	gene	157540	157773	.	+	.	ID=gene4803;Dbxref=GeneID:3776511;Name=spa-orf10;Note=SDYP194;gbkey=Gene;gene=spa-orf10;gene_biotype=protein_coding;locus_tag=SDY_P194
NC_007607.1	RefSeq	CDS	157540	157773	.	+	0	ID=cds4263;Parent=gene4803;Dbxref=Genbank:YP_406195.1,GeneID:3776511;Name=YP_406195.1;gbkey=CDS;gene=spa-orf10;product=hypothetical protein;protein_id=YP_406195.1;transl_table=11
NC_007607.1	RefSeq	gene	158350	158970	.	-	.	ID=gene4804;Dbxref=GeneID:3776512;Name=SDY_P195;Note=SDYP195;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P195
NC_007607.1	RefSeq	CDS	158350	158970	.	-	0	ID=cds4264;Parent=gene4804;Dbxref=Genbank:YP_406196.1,GeneID:3776512;Name=YP_406196.1;gbkey=CDS;product=IS600 ORF2;protein_id=YP_406196.1;transl_table=11
NC_007607.1	RefSeq	region	158380	159222	.	-	.	ID=id800;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	159179	159607	.	-	.	ID=gene4805;Dbxref=GeneID:3776513;Name=SDY_P196;Note=SDYP196;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P196
NC_007607.1	RefSeq	CDS	159179	159607	.	-	0	ID=cds4265;Parent=gene4805;Dbxref=Genbank:YP_406197.1,GeneID:3776513;Name=YP_406197.1;gbkey=CDS;product=IS3 ORF2;protein_id=YP_406197.1;transl_table=11
NC_007607.1	RefSeq	region	159216	159862	.	-	.	ID=id801;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	159579	159797	.	-	.	ID=gene4806;Dbxref=GeneID:3776514;Name=SDY_P197;Note=SDYP197;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P197
NC_007607.1	RefSeq	CDS	159579	159797	.	-	0	ID=cds4266;Parent=gene4806;Dbxref=Genbank:YP_406198.1,GeneID:3776514;Name=YP_406198.1;gbkey=CDS;product=IS3 ORF1;protein_id=YP_406198.1;transl_table=11
NC_007607.1	RefSeq	region	160460	160684	.	-	.	ID=id802;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	160815	161591	.	-	.	ID=gene4807;Dbxref=GeneID:3776515;Name=SDY_P198;Note=SDYP198;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P198
NC_007607.1	RefSeq	CDS	160815	161591	.	-	0	ID=cds4267;Parent=gene4807;Dbxref=Genbank:YP_406199.1,GeneID:3776515;Name=YP_406199.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406199.1;transl_table=11
NC_007607.1	RefSeq	gene	162115	162315	.	-	.	ID=gene4808;Dbxref=GeneID:3776516;Name=SDY_P199;Note=SDYP199;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P199
NC_007607.1	RefSeq	CDS	162115	162315	.	-	0	ID=cds4268;Parent=gene4808;Dbxref=Genbank:YP_406200.1,GeneID:3776516;Name=YP_406200.1;gbkey=CDS;product=putative transposase;protein_id=YP_406200.1;transl_table=11
NC_007607.1	RefSeq	gene	162252	162452	.	-	.	ID=gene4809;Dbxref=GeneID:3776517;Name=SDY_P200;Note=SDYP200;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P200
NC_007607.1	RefSeq	CDS	162252	162452	.	-	0	ID=cds4269;Parent=gene4809;Dbxref=Genbank:YP_406201.1,GeneID:3776517;Name=YP_406201.1;gbkey=CDS;product=putative transposase;protein_id=YP_406201.1;transl_table=11
NC_007607.1	RefSeq	gene	162546	162923	.	-	.	ID=gene4810;Dbxref=GeneID:3776518;Name=SDY_P201;Note=SDYP201;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P201
NC_007607.1	RefSeq	CDS	162546	162923	.	-	0	ID=cds4270;Parent=gene4810;Dbxref=Genbank:YP_406202.1,GeneID:3776518;Name=YP_406202.1;gbkey=CDS;product=putative transposase;protein_id=YP_406202.1;transl_table=11
NC_007607.1	RefSeq	region	163006	164311	.	+	.	ID=id803;gbkey=mobile_element
NC_007607.1	RefSeq	gene	163141	163461	.	-	.	ID=gene4811;Dbxref=GeneID:3776519;Name=SDY_P202;Note=SDYP202;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P202
NC_007607.1	RefSeq	CDS	163141	163461	.	-	0	ID=cds4271;Parent=gene4811;Dbxref=Genbank:YP_406203.1,GeneID:3776519;Name=YP_406203.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406203.1;transl_table=11
NC_007607.1	RefSeq	gene	163622	164269	.	+	.	ID=gene4812;Dbxref=GeneID:3776520;Name=SDY_P203;Note=SDYP203;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P203
NC_007607.1	RefSeq	CDS	163622	164269	.	+	0	ID=cds4272;Parent=gene4812;Dbxref=Genbank:YP_406204.1,GeneID:3776520;Name=YP_406204.1;gbkey=CDS;product=IS629 ORF2;protein_id=YP_406204.1;transl_table=11
NC_007607.1	RefSeq	region	164438	165037	.	-	.	ID=id804;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	164747	165148	.	-	.	ID=gene4813;Dbxref=GeneID:3776521;Name=SDY_P204;Note=SDYP204;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P204
NC_007607.1	RefSeq	CDS	164747	165148	.	-	0	ID=cds4273;Parent=gene4813;Dbxref=Genbank:YP_406205.1,GeneID:3776521;Name=YP_406205.1;gbkey=CDS;product=IS91 orf;protein_id=YP_406205.1;transl_table=11
NC_007607.1	RefSeq	region	165034	165556	.	-	.	ID=id805;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	165211	165468	.	-	.	ID=gene4814;Dbxref=GeneID:3776522;Name=SDY_P205;Note=SDYP205;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P205
NC_007607.1	RefSeq	CDS	165211	165468	.	-	0	ID=cds4274;Parent=gene4814;Dbxref=Genbank:YP_406206.1,GeneID:3776522;Name=YP_406206.1;gbkey=CDS;product=putative IS91 ORF2;protein_id=YP_406206.1;transl_table=11
NC_007607.1	RefSeq	gene	166459	166659	.	-	.	ID=gene4815;Dbxref=GeneID:3776523;Name=SDY_P206;Note=SDYP206;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P206
NC_007607.1	RefSeq	CDS	166459	166659	.	-	0	ID=cds4275;Parent=gene4815;Dbxref=Genbank:YP_406207.1,GeneID:3776523;Name=YP_406207.1;gbkey=CDS;product=putative reverse transcriptase%2C fragment;protein_id=YP_406207.1;transl_table=11
NC_007607.1	RefSeq	gene	166574	166816	.	-	.	ID=gene4816;Dbxref=GeneID:3776524;Name=SDY_P207;Note=SDYP207;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P207
NC_007607.1	RefSeq	CDS	166574	166816	.	-	0	ID=cds4276;Parent=gene4816;Dbxref=Genbank:YP_406208.1,GeneID:3776524;Name=YP_406208.1;gbkey=CDS;product=IS3 ORF2;protein_id=YP_406208.1;transl_table=11
NC_007607.1	RefSeq	region	166621	166989	.	-	.	ID=id806;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	166789	167112	.	-	.	ID=gene4817;Dbxref=GeneID:3776488;Name=SDY_P208;Note=SDYP208;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P208
NC_007607.1	RefSeq	CDS	166789	167112	.	-	0	ID=cds4277;Parent=gene4817;Dbxref=Genbank:YP_406209.1,GeneID:3776488;Name=YP_406209.1;gbkey=CDS;product=IS629 ORF2;protein_id=YP_406209.1;transl_table=11
NC_007607.1	RefSeq	region	166988	167728	.	-	.	ID=id807;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	166995	167351	.	-	.	ID=gene4818;Dbxref=GeneID:3776490;Name=SDY_P210;Note=SDYP210;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P210
NC_007607.1	RefSeq	CDS	166995	167351	.	-	0	ID=cds4278;Parent=gene4818;Dbxref=Genbank:YP_406210.1,GeneID:3776490;Name=YP_406210.1;gbkey=CDS;product=IS629 ORF2;protein_id=YP_406210.1;transl_table=11
NC_007607.1	RefSeq	gene	167342	167593	.	+	.	ID=gene4819;Dbxref=GeneID:3776489;Name=SDY_P209;Note=SDYP209;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P209
NC_007607.1	RefSeq	CDS	167342	167593	.	+	0	ID=cds4279;Parent=gene4819;Dbxref=Genbank:YP_406211.1,GeneID:3776489;Name=YP_406211.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406211.1;transl_table=11
NC_007607.1	RefSeq	gene	167852	169054	.	-	.	ID=gene4820;Dbxref=GeneID:3776491;Name=virA;Note=SDYP211;gbkey=Gene;gene=virA;gene_biotype=protein_coding;locus_tag=SDY_P211
NC_007607.1	RefSeq	CDS	167852	169054	.	-	0	ID=cds4280;Parent=gene4820;Dbxref=Genbank:YP_406212.1,GeneID:3776491;Name=YP_406212.1;gbkey=CDS;gene=virA;product=VirA;protein_id=YP_406212.1;transl_table=11
NC_007607.1	RefSeq	region	169375	170140	.	-	.	ID=id808;gbkey=mobile_element
NC_007607.1	RefSeq	gene	169389	169784	.	-	.	ID=gene4821;Dbxref=GeneID:3776492;Name=SDY_P212;Note=SDYP212;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P212
NC_007607.1	RefSeq	CDS	169389	169784	.	-	0	ID=cds4281;Parent=gene4821;Dbxref=Genbank:YP_406213.1,GeneID:3776492;Name=YP_406213.1;gbkey=CDS;product=iso-IS1 ORF2;protein_id=YP_406213.1;transl_table=11
NC_007607.1	RefSeq	gene	169811	170083	.	-	.	ID=gene4822;Dbxref=GeneID:3776493;Name=SDY_P213;Note=SDYP213;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P213
NC_007607.1	RefSeq	CDS	169811	170083	.	-	0	ID=cds4282;Parent=gene4822;Dbxref=Genbank:YP_406214.1,GeneID:3776493;Name=YP_406214.1;gbkey=CDS;product=iso-IS1 ORF1;protein_id=YP_406214.1;transl_table=11
NC_007607.1	RefSeq	gene	170357	173665	.	+	.	ID=gene4823;Dbxref=GeneID:3776494;Name=icsA;Note=SDYP214;gbkey=Gene;gene=icsA;gene_biotype=protein_coding;gene_synonym=virG;locus_tag=SDY_P214
NC_007607.1	RefSeq	CDS	170357	173665	.	+	0	ID=cds4283;Parent=gene4823;Dbxref=Genbank:YP_406215.1,GeneID:3776494;Name=YP_406215.1;gbkey=CDS;gene=icsA;product=IcsA;protein_id=YP_406215.1;transl_table=11
NC_007607.1	RefSeq	region	173880	175210	.	-	.	ID=id809;gbkey=mobile_element
NC_007607.1	RefSeq	gene	173891	174796	.	-	.	ID=gene4824;Dbxref=GeneID:3776495;Name=SDY_P215;Note=SDYP215;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P215
NC_007607.1	RefSeq	CDS	173891	174796	.	-	0	ID=cds4284;Parent=gene4824;Dbxref=Genbank:YP_406216.2,GeneID:3776495;Name=YP_406216.2;Note=IS2 OrfB%3B forms an overlapping reading frame with orfA%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B in some cases OrfB is itself expressed%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion element IS2 transposase InsD;protein_id=YP_406216.2;transl_table=11
NC_007607.1	RefSeq	gene	174754	175119	.	-	.	ID=gene4825;Dbxref=GeneID:3776496;Name=SDY_P216;Note=SDYP216;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P216
NC_007607.1	RefSeq	CDS	174754	175119	.	-	0	ID=cds4285;Parent=gene4825;Dbxref=Genbank:YP_406217.1,GeneID:3776496;Name=YP_406217.1;Note=IS2 OrfA%3B forms an overlapping reading frame with orfB%3B may form a fusion protein OrfAB due to ribosomal frameshifting%3B both OrfA and OrfAB bind terminal inverted repeats;gbkey=CDS;product=insertion sequence 2 OrfA protein;protein_id=YP_406217.1;transl_table=11
NC_007607.1	RefSeq	gene	175253	175876	.	+	.	ID=gene4826;Dbxref=GeneID:3776497;Name=SDY_P217;Note=SDYP217;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P217
NC_007607.1	RefSeq	CDS	175253	175876	.	+	0	ID=cds4286;Parent=gene4826;Dbxref=Genbank:YP_406218.1,GeneID:3776497;Name=YP_406218.1;gbkey=CDS;product=IS629 ORF2;protein_id=YP_406218.1;transl_table=11
NC_007607.1	RefSeq	region	175297	175918	.	+	.	ID=id810;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	region	175916	176056	.	-	.	ID=id811;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	176003	176233	.	+	.	ID=gene4827;Dbxref=GeneID:3776498;Name=SDY_P218;Note=SDYP218;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P218
NC_007607.1	RefSeq	CDS	176003	176233	.	+	0	ID=cds4287;Parent=gene4827;Dbxref=Genbank:YP_406219.1,GeneID:3776498;Name=YP_406219.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406219.1;transl_table=11
NC_007607.1	RefSeq	gene	176278	176538	.	+	.	ID=gene4828;Dbxref=GeneID:3776499;Name=repB;Note=SDYP219;gbkey=Gene;gene=repB;gene_biotype=protein_coding;locus_tag=SDY_P219
NC_007607.1	RefSeq	CDS	176278	176538	.	+	0	ID=cds4288;Parent=gene4828;Dbxref=Genbank:YP_406220.1,GeneID:3776499;Name=YP_406220.1;gbkey=CDS;gene=repB;product=replication protein;protein_id=YP_406220.1;transl_table=11
NC_007607.1	RefSeq	gene	176840	177697	.	+	.	ID=gene4829;Dbxref=GeneID:3776500;Name=repA;Note=SDYP220;gbkey=Gene;gene=repA;gene_biotype=protein_coding;locus_tag=SDY_P220
NC_007607.1	RefSeq	CDS	176840	177697	.	+	0	ID=cds4289;Parent=gene4829;Dbxref=Genbank:YP_406221.1,GeneID:3776500;Name=YP_406221.1;Note=RepA;gbkey=CDS;gene=repA;product=replication protein;protein_id=YP_406221.1;transl_table=11
NC_007607.1	RefSeq	gene	179127	179837	.	-	.	ID=gene4830;Dbxref=GeneID:3776501;Name=SDY_P221;Note=SDYP221;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P221
NC_007607.1	RefSeq	CDS	179127	179837	.	-	0	ID=cds4290;Parent=gene4830;Dbxref=Genbank:YP_406222.1,GeneID:3776501;Name=YP_406222.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406222.1;transl_table=11
NC_007607.1	RefSeq	region	179873	180057	.	+	.	ID=id812;Note=fragment;gbkey=mobile_element
NC_007607.1	RefSeq	gene	179875	180027	.	+	.	ID=gene4831;Dbxref=GeneID:3776502;Name=SDY_P222;Note=SDYP222;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P222
NC_007607.1	RefSeq	CDS	179875	180027	.	+	0	ID=cds4291;Parent=gene4831;Dbxref=Genbank:YP_406223.1,GeneID:3776502;Name=YP_406223.1;gbkey=CDS;product=IS3 ORF2;protein_id=YP_406223.1;transl_table=11
NC_007607.1	RefSeq	gene	180309	180446	.	-	.	ID=gene4832;Dbxref=GeneID:3776503;Name=SDY_P223;Note=SDYP223;gbkey=Gene;gene_biotype=protein_coding;locus_tag=SDY_P223
NC_007607.1	RefSeq	CDS	180309	180446	.	-	0	ID=cds4292;Parent=gene4832;Dbxref=Genbank:YP_406224.1,GeneID:3776503;Name=YP_406224.1;gbkey=CDS;product=hypothetical protein;protein_id=YP_406224.1;transl_table=11
NC_007607.1	RefSeq	gene	181408	182355	.	+	.	ID=gene4833;Dbxref=GeneID:3776504;Name=icsP;Note=SDYP224;gbkey=Gene;gene=icsP;gene_biotype=protein_coding;gene_synonym=sopA;locus_tag=SDY_P224
NC_007607.1	RefSeq	CDS	181408	182355	.	+	0	ID=cds4293;Parent=gene4833;Dbxref=Genbank:YP_406225.2,GeneID:3776504;Name=YP_406225.2;Note=outer membrane protease%3B involved in virulence in many organisms%3B OmpT%3B IcsP%3B SopA%3B Pla%3B PgtE%3B omptin%3B in Escherichia coli OmpT can degrade antimicrobial peptides%3B in Yersinia Pla activates plasminogen during infection%3B in Shigella flexneria SopA cleaves the autotransporter IcsA;gbkey=CDS;gene=icsP;product=outer membrane protease;protein_id=YP_406225.2;transl_table=11
NC_007607.1	RefSeq	region	182392	182545	.	-	.	ID=id813;Note=fragment;gbkey=mobile_element
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