locus-tag	class	description
SFV_RS00010	COG0460	homoserine dehydrogenase
SFV_RS00010	COG0527	aspartate kinase activity
SFV_RS00020	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
SFV_RS00045	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SFV_RS00050	COG0521	Mo-molybdopterin cofactor biosynthetic process
SFV_RS00055	COG1584	GPR1 FUN34 yaaH family protein
SFV_RS00060	COG4735	regulation of single-species biofilm formation
SFV_RS00090	COG0583	DNA-binding transcription factor activity
SFV_RS00120	COG0196	riboflavin kinase activity
SFV_RS00135	COG1047	Peptidyl-prolyl cis-trans
SFV_RS00165	COG0505	Belongs to the CarA family
SFV_RS00170	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
SFV_RS00235	COG2271	Major facilitator Superfamily
SFV_RS00255	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
SFV_RS00280	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SFV_RS00290	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
SFV_RS00295	COG0564	pseudouridine synthase activity
SFV_RS00305	COG0417	DNA replication proofreading
SFV_RS00310	COG0235	Class ii aldolase
SFV_RS00325	COG4977	sequence-specific DNA binding
SFV_RS00330	COG0586	Pfam SNARE associated Golgi protein
SFV_RS00340	COG1178	ABC-type Fe3 transport system permease component
SFV_RS00345	COG4143	(ABC) transporter
SFV_RS00390	COG0583	DNA-binding transcription factor activity
SFV_RS00395	COG0028	Belongs to the TPP enzyme family
SFV_RS00400	COG0440	acetolactate synthase activity
SFV_RS00410	COG1609	Transcriptional regulator
SFV_RS00430	COG3116	cell division
SFV_RS00435	COG0768	penicillin binding
SFV_RS00445	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SFV_RS00455	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
SFV_RS00460	COG0772	Belongs to the SEDS family
SFV_RS00480	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
SFV_RS00485	COG0849	cell division
SFV_RS00510	COG0494	nUDIX hydrolase
SFV_RS00540	COG1459	type II secretion system
SFV_RS00545	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SFV_RS00550	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SFV_RS00555	COG4969	Belongs to the N-Me-Phe pilin family
SFV_RS00565	COG0157	Belongs to the NadC ModD family
SFV_RS00570	COG3023	N-Acetylmuramoyl-L-alanine amidase
SFV_RS00575	COG3725	Membrane protein required for beta-lactamase induction
SFV_RS00585	COG2186	Transcriptional regulator
SFV_RS00590	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
SFV_RS00595	COG0508	dehydrogenase complex catalyzes the overall conversion of
SFV_RS00600	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SFV_RS00605	COG3064	Membrane
SFV_RS00610	COG1049	propionate catabolic process, 2-methylcitrate cycle
SFV_RS00635	COG2132	Multicopper oxidase
SFV_RS00640	COG4993	Dehydrogenase
SFV_RS00645	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
SFV_RS00650	COG0288	reversible hydration of carbon dioxide
SFV_RS00655	COG1131	(ABC) transporter
SFV_RS00660	COG0842	Transport permease protein
SFV_RS00665	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
SFV_RS00670	COG0726	polysaccharide deacetylase
SFV_RS00680	COG5464	transposase or invertase
SFV_RS00695	COG3539	Fimbrial protein
SFV_RS00705	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SFV_RS00710	COG0617	tRNA 3'-terminal CCA addition
SFV_RS00720	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
SFV_RS00730	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
SFV_RS00735	COG1643	Atp-dependent helicase
SFV_RS00745	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SFV_RS00750	COG4774	siderophore transport
SFV_RS00755	COG1120	ATPase activity
SFV_RS00760	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SFV_RS00765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SFV_RS00785	COG2860	membrane
SFV_RS00805	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SFV_RS00830	COG0024	Methionine aminopeptidase
SFV_RS00860	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
SFV_RS00865	COG0575	Belongs to the CDS family
SFV_RS00870	COG0750	zinc metalloprotease
SFV_RS00880	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
SFV_RS00885	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
SFV_RS00910	COG0587	DNA-directed DNA polymerase activity
SFV_RS00920	COG1982	Orn Lys Arg decarboxylase major
SFV_RS00925	COG0346	lactoylglutathione lyase activity
SFV_RS00935	COG4568	rho-dependent transcription termination
SFV_RS00945	COG4681	YaeQ
SFV_RS00950	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
SFV_RS00955	COG3015	lipoprotein NlpE involved in copper resistance
SFV_RS00960	COG0791	NLP P60 protein
SFV_RS00970	COG1720	tRNA m6t6A37 methyltransferase activity
SFV_RS00980	COG1464	Belongs to the NlpA lipoprotein family
SFV_RS00985	COG2011	ABC-type metal ion transport system permease component
SFV_RS00995	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
SFV_RS01025	COG0656	L-ascorbic acid biosynthetic process
SFV_RS01030	COG3385	transposase activity
SFV_RS01035	COG0583	DNA-binding transcription factor activity
SFV_RS01045	COG2226	methyltransferase
SFV_RS01050	COG0741	lytic transglycosylase activity
SFV_RS01050	COG1388	LysM domain
SFV_RS01060	COG2226	methyltransferase
SFV_RS01070	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SFV_RS01140	COG3772	lysozyme
SFV_RS01265	COG1802	Transcriptional regulator
SFV_RS01265	COG4626	Terminase
SFV_RS01275	COG4695	Portal protein
SFV_RS01320	COG4386	tail sheath protein
SFV_RS01340	COG4228	DNA circulation
SFV_RS01360	COG3299	homolog of phage Mu protein gp47
SFV_RS01365	COG3778	Protein conserved in bacteria
SFV_RS01390	COG2246	polysaccharide biosynthetic process
SFV_RS01395	COG0582	viral genome integration into host DNA
SFV_RS01445	COG3723	Recombinational DNA repair protein, rece pathway
SFV_RS01490	COG3385	transposase activity
SFV_RS01505	COG0305	Participates in initiation and elongation during chromosome replication
SFV_RS01585	COG0582	viral genome integration into host DNA
SFV_RS01615	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
SFV_RS01635	COG2195	Cleaves the N-terminal amino acid of tripeptides
SFV_RS01650	COG0454	-acetyltransferase
SFV_RS01660	COG2161	toxin-antitoxin pair type II binding
SFV_RS01680	COG1943	Transposase
SFV_RS01685	COG0791	NLP P60 protein
SFV_RS01690	COG3034	peptidoglycan biosynthetic process
SFV_RS01695	COG0121	glutamine amidotransferase
SFV_RS01705	COG1960	acyl-CoA dehydrogenase activity
SFV_RS01715	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
SFV_RS01765	COG0247	lactate metabolic process
SFV_RS01770	COG1139	Iron-sulfur cluster binding protein
SFV_RS01775	COG1556	Lactate utilization protein
SFV_RS01805	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SFV_RS01825	COG3423	Transcriptional regulator
SFV_RS01835	COG4521	taurine ABC transporter
SFV_RS01845	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SFV_RS01850	COG2175	clavaminate synthase activity
SFV_RS01855	COG0113	porphobilinogen synthase activity
SFV_RS01860	COG3468	outer membrane autotransporter barrel domain protein
SFV_RS01875	COG2801	Transposase and inactivated derivatives
SFV_RS01880	COG3468	outer membrane autotransporter barrel domain protein
SFV_RS01885	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SFV_RS01890	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SFV_RS01900	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
SFV_RS01920	COG1181	Belongs to the D-alanine--D-alanine ligase family
SFV_RS01935	COG1785	Belongs to the alkaline phosphatase family
SFV_RS01960	COG3706	GGDEF domain
SFV_RS01965	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SFV_RS01990	COG4126	flavin adenine dinucleotide binding
SFV_RS02015	COG1940	carbohydrate kinase activity
SFV_RS02020	COG2814	Major facilitator Superfamily
SFV_RS02025	COG0419	ATPase involved in DNA repair
SFV_RS02030	COG0420	3'-5' exonuclease activity
SFV_RS02040	COG5002	protein histidine kinase activity
SFV_RS02045	COG1114	Component of the transport system for branched-chain amino acids
SFV_RS02050	COG1113	amino acid transport
SFV_RS02055	COG0366	Alpha amylase catalytic
SFV_RS02075	COG1862	Preprotein translocase
SFV_RS02080	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SFV_RS02085	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SFV_RS02090	COG1403	HNH endonuclease
SFV_RS02100	COG3248	Nucleoside-binding outer membrane protein
SFV_RS02105	COG4238	major outer membrane lipoprotein
SFV_RS02115	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SFV_RS02115	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SFV_RS02130	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
SFV_RS02135	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
SFV_RS02140	COG0667	Aldo Keto reductase
SFV_RS02150	COG0142	geranyltranstransferase activity
SFV_RS02165	COG0693	protein deglycase activity
SFV_RS02170	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
SFV_RS02190	COG2814	Major facilitator Superfamily
SFV_RS02225	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
SFV_RS02230	COG1845	cytochrome c oxidase, subunit III
SFV_RS02240	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
SFV_RS02250	COG4372	Transposase
SFV_RS02260	COG3436	PFAM IS66 Orf2 family protein
SFV_RS02270	COG2223	nitrite transmembrane transporter activity
SFV_RS02275	COG3056	Lipoprotein
SFV_RS02280	COG0271	Belongs to the BolA IbaG family
SFV_RS02305	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
SFV_RS02310	COG0776	regulation of translation
SFV_RS02315	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SFV_RS02320	COG1555	photosystem II stabilization
SFV_RS02325	COG0824	Thioesterase
SFV_RS02335	COG4533	DNA binding
SFV_RS02345	COG1522	sequence-specific DNA binding
SFV_RS02350	COG1132	(ABC) transporter
SFV_RS02355	COG1132	(ABC) transporter
SFV_RS02360	COG0347	Belongs to the P(II) protein family
SFV_RS02365	COG0004	ammonium transporteR
SFV_RS02370	COG1946	Acyl-CoA thioesterase
SFV_RS02375	COG3126	Type III secretion system lipoprotein chaperone (YscW)
SFV_RS02380	COG3385	transposase activity
SFV_RS02385	COG3695	enzyme binding
SFV_RS02390	COG5507	3-demethylubiquinone-9 3-methyltransferase
SFV_RS02395	COG4943	cyclic-guanylate-specific phosphodiesterase activity
SFV_RS02405	COG0110	maltose O-acetyltransferase activity
SFV_RS02420	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SFV_RS02425	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SFV_RS02430	COG1309	transcriptional regulator
SFV_RS02435	COG3264	Mechanosensitive ion channel
SFV_RS02435	COG1196	nuclear chromosome segregation
SFV_RS02450	COG3923	Primosomal replication protein n
SFV_RS02455	COG2832	Protein of unknown function (DUF454)
SFV_RS02465	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
SFV_RS02500	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SFV_RS02505	COG4651	solute:proton antiporter activity
SFV_RS02505	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
SFV_RS02510	COG2223	nitrite transmembrane transporter activity
SFV_RS02520	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
SFV_RS02525	COG3735	TraB family
SFV_RS02530	COG3093	addiction module antidote protein HigA
SFV_RS02535	COG2217	Heavy metal translocating P-type atpase
SFV_RS02545	COG0531	amino acid
SFV_RS02550	COG0789	Transcriptional regulator
SFV_RS02555	COG1585	Membrane protein implicated in regulation of membrane protease activity
SFV_RS02560	COG0330	HflC and HflK could
SFV_RS02565	COG4619	ABC transporter
SFV_RS02570	COG0390	transport system, permease component
SFV_RS02575	COG3118	belongs to the thioredoxin family
SFV_RS02580	COG0300	oxidoreductase activity
SFV_RS02590	COG4181	ATPase activity
SFV_RS02595	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
SFV_RS02605	COG0583	DNA-binding transcription factor activity
SFV_RS02615	COG1414	Transcriptional regulator
SFV_RS02620	COG3960	tartronate-semialdehyde synthase activity
SFV_RS02625	COG3622	Belongs to the hyi family
SFV_RS02640	COG3257	ureidoglycine aminohydrolase activity
SFV_RS02645	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SFV_RS02655	COG0549	Belongs to the carbamate kinase family
SFV_RS02660	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
SFV_RS02665	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SFV_RS02675	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SFV_RS02685	COG1988	membrane-bound metal-dependent
SFV_RS02690	COG2501	S4 domain
SFV_RS02700	COG3539	Fimbrial protein
SFV_RS02710	COG3188	usher protein
SFV_RS02725	COG3188	usher protein
SFV_RS02735	COG3539	Fimbrial protein
SFV_RS02750	COG2197	response regulator
SFV_RS02760	COG2207	Transcriptional regulator
SFV_RS02775	COG1215	transferase activity, transferring glycosyl groups
SFV_RS02780	COG5002	protein histidine kinase activity
SFV_RS02785	COG0745	RESPONSE REGULATOR receiver
SFV_RS02795	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SFV_RS02800	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SFV_RS02805	COG0582	viral genome integration into host DNA
SFV_RS02825	COG5434	Belongs to the glycosyl hydrolase 28 family
SFV_RS02860	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SFV_RS02865	COG1113	amino acid transport
SFV_RS02870	COG0668	transmembrane transport
SFV_RS02875	COG0778	Nitroreductase
SFV_RS02880	COG2315	Protein conserved in bacteria
SFV_RS02895	COG2963	transposase activity
SFV_RS02920	COG2801	Transposase and inactivated derivatives
SFV_RS02935	COG2977	Belongs to the P-Pant transferase superfamily
SFV_RS02940	COG4771	TonB-dependent receptor
SFV_RS02945	COG2382	esterase
SFV_RS02950	COG3251	PFAM MbtH domain protein
SFV_RS02965	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
SFV_RS02970	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
SFV_RS02975	COG1120	ATPase activity
SFV_RS02980	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SFV_RS02985	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SFV_RS02995	COG4592	Periplasmic binding protein
SFV_RS03005	COG1021	2,3-dihydroxybenzoate-AMP ligase
SFV_RS03010	COG3433	isochorismatase activity
SFV_RS03010	COG1535	isochorismatase
SFV_RS03015	COG1028	Short-chain dehydrogenase reductase Sdr
SFV_RS03020	COG2050	protein possibly involved in aromatic compounds catabolism
SFV_RS03025	COG1966	Carbon starvation protein
SFV_RS03030	COG2879	small protein
SFV_RS03035	COG0371	Dehydrogenase
SFV_RS03040	COG0436	Aminotransferase
SFV_RS03045	COG1475	DNA binding
SFV_RS03060	COG1475	DNA binding
SFV_RS03065	COG3969	phosphoadenosine phosphosulfate
SFV_RS03070	COG3969	phosphoadenosine phosphosulfate
SFV_RS03075	COG2963	transposase activity
SFV_RS03080	COG2801	Transposase and inactivated derivatives
SFV_RS03085	COG0583	DNA-binding transcription factor activity
SFV_RS03090	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
SFV_RS03095	COG0450	alkyl hydroperoxide reductase
SFV_RS03100	COG3634	alkyl hydroperoxide reductase activity
SFV_RS03110	COG1063	alcohol dehydrogenase
SFV_RS03120	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
SFV_RS03125	COG3719	Belongs to the RNase T2 family
SFV_RS03130	COG0471	metal ion transport
SFV_RS03145	COG3051	citrate lyase alpha subunit
SFV_RS03150	COG2301	Belongs to the HpcH HpaI aldolase family
SFV_RS03175	COG0582	viral genome integration into host DNA
SFV_RS03180	COG0561	phosphatase activity
SFV_RS03190	COG4149	molybdate abc transporter
SFV_RS03195	COG0725	ABC transporter, periplasmic molybdate-binding protein
SFV_RS03205	COG3585	molybdate ion transport
SFV_RS03205	COG2005	Transcriptional regulator
SFV_RS03215	COG1119	ATPase activity
SFV_RS03220	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SFV_RS03225	COG1085	galactose-1-phosphate uridylyltransferase
SFV_RS03235	COG2017	converts alpha-aldose to the beta-anomer
SFV_RS03245	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SFV_RS03265	COG3201	nicotinamide mononucleotide transporter
SFV_RS03290	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
SFV_RS03295	COG2885	chlorophyll binding
SFV_RS03305	COG3064	Membrane
SFV_RS03310	COG0848	biopolymer transport protein
SFV_RS03315	COG0811	peptide transport
SFV_RS03320	COG0824	Thioesterase
SFV_RS03325	COG3790	cyd operon protein YbgE
SFV_RS03330	COG4890	Cyd operon protein YbgT
SFV_RS03335	COG1294	oxidase, subunit
SFV_RS03340	COG1271	oxidase subunit
SFV_RS03350	COG0383	alpha-mannosidase activity
SFV_RS03360	COG2188	Transcriptional regulator
SFV_RS03365	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
SFV_RS03375	COG0508	dehydrogenase complex catalyzes the overall conversion of
SFV_RS03380	COG0567	Dehydrogenase, E1 component
SFV_RS03390	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
SFV_RS03395	COG1053	succinate dehydrogenase
SFV_RS03400	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
SFV_RS03405	COG2009	succinate dehydrogenase
SFV_RS03415	COG0372	Belongs to the citrate synthase family
SFV_RS03420	COG3539	Fimbrial protein
SFV_RS03425	COG3188	usher protein
SFV_RS03430	COG3121	Chaperone
SFV_RS03435	COG3539	Fimbrial protein
SFV_RS03440	COG3539	Fimbrial protein
SFV_RS03465	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
SFV_RS03470	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
SFV_RS03480	COG0415	Belongs to the DNA photolyase family
SFV_RS03485	COG3272	Protein of unknown function (DUF1722)
SFV_RS03500	COG3209	COG3209 Rhs family protein
SFV_RS03550	COG0745	RESPONSE REGULATOR receiver
SFV_RS03565	COG0531	amino acid
SFV_RS03570	COG0033	Phosphoglucomutase
SFV_RS03575	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
SFV_RS03580	COG0596	Alpha beta hydrolase
SFV_RS03590	COG0716	FMN binding
SFV_RS03605	COG0735	belongs to the Fur family
SFV_RS03625	COG2190	(PTS) system
SFV_RS03625	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SFV_RS03625	COG1263	PTS System
SFV_RS03635	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
SFV_RS03640	COG1846	Transcriptional regulator
SFV_RS03640	COG1940	carbohydrate kinase activity
SFV_RS03645	COG0647	UMP catabolic process
SFV_RS03650	COG0367	asparagine synthase
SFV_RS03690	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
SFV_RS03700	COG1702	phosphate starvation-inducible protein PhoH
SFV_RS03710	COG4535	Mg2 and Co2 transporter CorC
SFV_RS03715	COG0815	Transfers the fatty acyl group on membrane lipoproteins
SFV_RS03720	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SFV_RS03725	COG0765	amino acid transport
SFV_RS03730	COG0765	amino acid transport
SFV_RS03735	COG1126	abc transporter atp-binding protein
SFV_RS03745	COG0443	Heat shock 70 kDa protein
SFV_RS03750	COG2214	Heat shock protein DnaJ domain protein
SFV_RS03760	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
SFV_RS03765	COG2214	Heat shock protein DnaJ domain protein
SFV_RS03775	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
SFV_RS03780	COG2888	peptidyl-tyrosine sulfation
SFV_RS03795	COG1466	dna polymerase III delta subunit
SFV_RS03805	COG0406	alpha-ribazole phosphatase activity
SFV_RS03810	COG0799	negative regulation of ribosome biogenesis
SFV_RS03820	COG0768	penicillin binding
SFV_RS03825	COG0772	Belongs to the SEDS family
SFV_RS03830	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
SFV_RS03835	COG1686	Belongs to the peptidase S11 family
SFV_RS03855	COG0583	DNA-binding transcription factor activity
SFV_RS03865	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SFV_RS03870	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
SFV_RS03890	COG3069	C4-dicarboxylate transmembrane transporter activity
SFV_RS03895	COG4565	transcriptional regulatory protein
SFV_RS03905	COG2801	Transposase and inactivated derivatives
SFV_RS03950	COG1783	phage Terminase large subunit
SFV_RS03965	COG1783	phage Terminase large subunit
SFV_RS04000	COG4372	Transposase
SFV_RS04005	COG3436	PFAM IS66 Orf2 family protein
SFV_RS04015	COG3772	lysozyme
SFV_RS04080	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
SFV_RS04115	COG1396	sequence-specific DNA binding
SFV_RS04140	COG3646	Phage regulatory protein
SFV_RS04185	COG2828	Protein conserved in bacteria
SFV_RS04190	COG0471	metal ion transport
SFV_RS04195	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
SFV_RS04200	COG4677	pectinesterase activity
SFV_RS04205	COG1881	PFAM PEBP family protein
SFV_RS04210	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
SFV_RS04225	COG2226	methyltransferase
SFV_RS04230	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
SFV_RS04240	COG0391	Required for morphogenesis under gluconeogenic growth conditions
SFV_RS04255	COG0521	Mo-molybdopterin cofactor biosynthetic process
SFV_RS04265	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
SFV_RS04270	COG0314	molybdopterin synthase activity
SFV_RS04275	COG0670	Belongs to the BI1 family
SFV_RS04280	COG0670	Belongs to the BI1 family
SFV_RS04285	COG0392	lysyltransferase activity
SFV_RS04295	COG3568	Endonuclease Exonuclease Phosphatase
SFV_RS04310	COG0842	Transport permease protein
SFV_RS04315	COG1131	(ABC) transporter
SFV_RS04325	COG1309	transcriptional regulator
SFV_RS04330	COG0513	Belongs to the DEAD box helicase family
SFV_RS04350	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
SFV_RS04355	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
SFV_RS04365	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
SFV_RS04380	COG3385	transposase activity
SFV_RS04400	COG0668	transmembrane transport
SFV_RS04410	COG1126	abc transporter atp-binding protein
SFV_RS04415	COG0765	amino acid transport
SFV_RS04420	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SFV_RS04435	COG5006	permease, DMT superfamily
SFV_RS04440	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
SFV_RS04445	COG2194	sulfuric ester hydrolase activity
SFV_RS04455	COG1321	iron dependent repressor
SFV_RS04460	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
SFV_RS04465	COG1376	ErfK ybiS ycfS ynhG family protein
SFV_RS04470	COG0488	(ABC) transporter
SFV_RS04480	COG0561	phosphatase activity
SFV_RS04485	COG1882	Formate acetyltransferase
SFV_RS04490	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SFV_RS04495	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SFV_RS04500	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
SFV_RS04505	COG0303	'Molybdopterin
SFV_RS04510	COG1446	asparaginase
SFV_RS04535	COG2200	EAL domain
SFV_RS04540	COG2199	diguanylate cyclase activity
SFV_RS04555	COG2133	pyrroloquinoline quinone binding
SFV_RS04560	COG2133	pyrroloquinoline quinone binding
SFV_RS04565	COG0625	glutathione transferase activity
SFV_RS04570	COG1686	Belongs to the peptidase S11 family
SFV_RS04585	COG1686	Belongs to the peptidase S11 family
SFV_RS04590	COG1349	DNA-binding transcription factor activity
SFV_RS04595	COG0671	phosphoesterase, PA-phosphatase related
SFV_RS04600	COG2814	Major facilitator Superfamily
SFV_RS04610	COG0561	phosphatase activity
SFV_RS04615	COG0738	Major facilitator superfamily
SFV_RS04620	COG3226	Transcriptional regulator
SFV_RS04635	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SFV_RS04645	COG0778	Nitroreductase
SFV_RS04665	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
SFV_RS04675	COG1176	ABC-type spermidine putrescine transport system, permease component I
SFV_RS04680	COG1177	transmembrane transport
SFV_RS04695	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SFV_RS04700	COG4160	amino acid transport
SFV_RS04705	COG4215	(ABC) transporter
SFV_RS04710	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SFV_RS04715	COG1126	abc transporter atp-binding protein
SFV_RS04760	COG3023	N-Acetylmuramoyl-L-alanine amidase
SFV_RS04765	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SFV_RS04770	COG0702	epimerase
SFV_RS04775	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
SFV_RS04780	COG0028	Belongs to the TPP enzyme family
SFV_RS04785	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SFV_RS04795	COG2431	L-lysine efflux transmembrane transporter activity
SFV_RS04820	COG3593	DNA synthesis involved in DNA repair
SFV_RS04825	COG2990	Protein conserved in bacteria
SFV_RS04830	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SFV_RS04840	COG1278	Cold shock
SFV_RS04850	COG0542	response to heat
SFV_RS04870	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
SFV_RS04875	COG4988	ABC transporter
SFV_RS04880	COG0492	ferredoxin-NADP+ reductase activity
SFV_RS04885	COG1522	sequence-specific DNA binding
SFV_RS04900	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SFV_RS04910	COG0243	molybdopterin cofactor binding
SFV_RS04915	COG0243	molybdopterin cofactor binding
SFV_RS04920	COG0437	4 iron, 4 sulfur cluster binding
SFV_RS04925	COG3302	dmso reductase anchor subunit
SFV_RS04930	COG1335	isochorismatase
SFV_RS04945	COG3436	PFAM IS66 Orf2 family protein
SFV_RS04970	COG2249	NAD(P)H dehydrogenase (quinone) activity
SFV_RS04975	COG0583	DNA-binding transcription factor activity
SFV_RS04990	COG0583	DNA-binding transcription factor activity
SFV_RS04995	COG0531	amino acid
SFV_RS05010	COG2249	NAD(P)H dehydrogenase (quinone) activity
SFV_RS05015	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SFV_RS05020	COG1882	Formate acetyltransferase
SFV_RS05025	COG2116	formate transmembrane transporter activity
SFV_RS05030	COG1944	ATP diphosphatase activity
SFV_RS05050	COG3385	transposase activity
SFV_RS05055	COG0501	Belongs to the peptidase M48B family
SFV_RS05065	COG0539	negative regulation of cytoplasmic translation
SFV_RS05090	COG3214	Protein conserved in bacteria
SFV_RS05105	COG3173	Aminoglycoside phosphotransferase
SFV_RS05110	COG1434	Gram-negative-bacterium-type cell wall biogenesis
SFV_RS05115	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
SFV_RS05125	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
SFV_RS05135	COG3385	transposase activity
SFV_RS05140	COG2989	Protein conserved in bacteria
SFV_RS05145	COG3108	Peptidase M15
SFV_RS05150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SFV_RS05155	COG1448	Aminotransferase
SFV_RS05180	COG0308	aminopeptidase N
SFV_RS05190	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SFV_RS05205	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SFV_RS05215	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
SFV_RS05220	COG0431	NADPH-dependent FMN reductase
SFV_RS05235	COG3539	Fimbrial protein
SFV_RS05250	COG3121	Chaperone
SFV_RS05255	COG3188	usher protein
SFV_RS05260	COG3539	Fimbrial protein
SFV_RS05265	COG3539	Fimbrial protein
SFV_RS05270	COG3539	Fimbrial protein
SFV_RS05275	COG3121	Chaperone
SFV_RS05290	COG3217	Mosc domain protein beta barrel domain protein
SFV_RS05290	COG0633	Ferredoxin
SFV_RS05300	COG0488	(ABC) transporter
SFV_RS05305	COG2995	paraquat-inducible protein a
SFV_RS05310	COG3008	intermembrane lipid transfer
SFV_RS05310	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
SFV_RS05315	COG3009	Protein conserved in bacteria
SFV_RS05320	COG3130	regulation of translation
SFV_RS05330	COG1067	ATP-dependent peptidase activity
SFV_RS05350	COG3070	regulator of competence-specific genes
SFV_RS05365	COG3070	regulator of competence-specific genes
SFV_RS05370	COG1289	transmembrane transporter activity
SFV_RS05375	COG3304	Inner membrane component domain
SFV_RS05380	COG0210	DNA helicase
SFV_RS05400	COG1832	CoA-binding protein
SFV_RS05420	COG2920	part of a sulfur-relay system
SFV_RS05425	COG0670	Belongs to the BI1 family
SFV_RS05435	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
SFV_RS05440	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
SFV_RS05445	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
SFV_RS05450	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
SFV_RS05455	COG1999	signal sequence binding
SFV_RS05460	COG1773	rubredoxin
SFV_RS05465	COG1271	oxidase subunit
SFV_RS05470	COG1294	oxidase, subunit
SFV_RS05485	COG3206	protein involved in exopolysaccharide biosynthesis
SFV_RS05485	COG0489	protein tyrosine kinase activity
SFV_RS05490	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
SFV_RS05495	COG1596	polysaccharide export
SFV_RS05500	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SFV_RS05520	COG1278	Cold shock
SFV_RS05535	COG1278	Cold shock
SFV_RS05550	COG0348	domain, Protein
SFV_RS05555	COG0784	Response regulator, receiver
SFV_RS05555	COG2198	Histidine kinase
SFV_RS05555	COG2205	protein histidine kinase activity
SFV_RS05560	COG1879	ABC-type sugar transport system periplasmic component
SFV_RS05565	COG0745	RESPONSE REGULATOR receiver
SFV_RS05570	COG3005	denitrification pathway
SFV_RS05575	COG0243	molybdopterin cofactor binding
SFV_RS05630	COG2233	PERMEase
SFV_RS05665	COG1309	transcriptional regulator
SFV_RS05685	COG2822	iron ion transport
SFV_RS05695	COG1702	phosphate starvation-inducible protein PhoH
SFV_RS05700	COG3658	cytochrome
SFV_RS05705	COG1215	transferase activity, transferring glycosyl groups
SFV_RS05740	COG2801	Transposase and inactivated derivatives
SFV_RS05775	COG3381	protein complex oligomerization
SFV_RS05800	COG2197	response regulator
SFV_RS05870	COG2943	transferase activity, transferring hexosyl groups
SFV_RS05960	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
SFV_RS05970	COG1560	Kdo2-lipid A biosynthetic process
SFV_RS05985	COG3038	cytochrome b561
SFV_RS06020	COG2999	glutathione oxidoreductase activity
SFV_RS06030	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SFV_RS06040	COG0673	inositol 2-dehydrogenase activity
SFV_RS06045	COG0728	peptidoglycan biosynthetic process
SFV_RS06050	COG3418	PFAM FlgN family protein
SFV_RS06055	COG2747	anti-sigma28 factor FlgM
SFV_RS06060	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
SFV_RS06065	COG1815	bacterial-type flagellum-dependent cell motility
SFV_RS06075	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
SFV_RS06080	COG1749	Flagellar hook protein flgE
SFV_RS06085	COG4787	bacterial-type flagellum-dependent cell motility
SFV_RS06090	COG4786	Flagellar basal body rod
SFV_RS06105	COG3951	Flagellar rod assembly protein muramidase FlgJ
SFV_RS06105	COG1705	Flagellar rod assembly protein muramidase FlgJ
SFV_RS06115	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
SFV_RS06120	COG1530	ribonuclease E activity
SFV_RS06130	COG0564	pseudouridine synthase activity
SFV_RS06135	COG0424	maF-like protein
SFV_RS06140	COG1399	metal-binding, possibly nucleic acid-binding protein
SFV_RS06160	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
SFV_RS06165	COG1028	Short-chain dehydrogenase reductase Sdr
SFV_RS06175	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
SFV_RS06180	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SFV_RS06185	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
SFV_RS06195	COG0470	DNA polymerase III
SFV_RS06200	COG0084	hydrolase, TatD family'
SFV_RS06205	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SFV_RS06205	COG1263	PTS System
SFV_RS06210	COG4773	Receptor
SFV_RS06215	COG0537	adenosine 5'-monophosphoramidase activity
SFV_RS06220	COG5633	Lipoprotein
SFV_RS06225	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
SFV_RS06245	COG1252	NADH dehydrogenase
SFV_RS06250	COG3134	Outer membrane lipoprotein
SFV_RS06255	COG1309	transcriptional regulator
SFV_RS06265	COG1388	LysM domain
SFV_RS06265	COG1376	ErfK ybiS ycfS ynhG family protein
SFV_RS06270	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
SFV_RS06275	COG4763	Acyl-transferase
SFV_RS06280	COG4591	ABC-type transport system involved in lipoprotein release permease component
SFV_RS06290	COG4591	ABC-type transport system involved in lipoprotein release permease component
SFV_RS06305	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
SFV_RS06310	COG1177	transmembrane transport
SFV_RS06335	COG2850	peptidyl-arginine hydroxylation
SFV_RS06455	COG4626	Terminase
SFV_RS06455	COG1802	Transcriptional regulator
SFV_RS06480	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
SFV_RS06505	COG0538	isocitrate dehydrogenase activity
SFV_RS06555	COG2894	cell division
SFV_RS06595	COG2801	Transposase and inactivated derivatives
SFV_RS06615	COG0179	Fumarylacetoacetate (FAA) hydrolase
SFV_RS06635	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
SFV_RS06640	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
SFV_RS06660	COG2719	SpoVR family
SFV_RS06670	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
SFV_RS06685	COG1619	proteins homologs of microcin C7 resistance protein MccF
SFV_RS06695	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
SFV_RS06710	COG0157	Belongs to the NadC ModD family
SFV_RS06715	COG0500	methyltransferase
SFV_RS06720	COG1120	ATPase activity
SFV_RS06725	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SFV_RS06730	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SFV_RS06750	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SFV_RS06750	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
SFV_RS06750	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SFV_RS06755	COG1461	Dihydroxyacetone kinase
SFV_RS06760	COG2376	Dihydroxyacetone kinase
SFV_RS06765	COG3284	Transcriptional regulator
SFV_RS06770	COG3468	outer membrane autotransporter barrel domain protein
SFV_RS06780	COG0012	GTP binding
SFV_RS06795	COG0659	secondary active sulfate transmembrane transporter activity
SFV_RS06800	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
SFV_RS06825	COG2890	protein-(glutamine-N5) methyltransferase activity
SFV_RS06830	COG3094	Invasion gene expression up-regulator, SirB
SFV_RS06835	COG2912	Transglutaminase-like superfamily
SFV_RS06850	COG3385	transposase activity
SFV_RS06860	COG0387	Pfam Sodium calcium exchanger
SFV_RS06865	COG4572	Cation transport regulator
SFV_RS06870	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
SFV_RS06875	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
SFV_RS06880	COG4932	domain protein
SFV_RS06885	COG2197	response regulator
SFV_RS06890	COG3850	Histidine kinase
SFV_RS06900	COG2223	nitrite transmembrane transporter activity
SFV_RS06905	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
SFV_RS06910	COG1140	nitrate reductase beta subunit
SFV_RS06915	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
SFV_RS06920	COG2181	nitrate reductase activity
SFV_RS06930	COG0788	formyltetrahydrofolate deformylase activity
SFV_RS06940	COG1752	Esterase of the alpha-beta hydrolase superfamily
SFV_RS06945	COG0745	RESPONSE REGULATOR receiver
SFV_RS06950	COG1210	Utp--glucose-1-phosphate uridylyltransferase
SFV_RS06960	COG1435	thymidine kinase activity
SFV_RS06965	COG3385	transposase activity
SFV_RS06970	COG1454	alcohol dehydrogenase
SFV_RS06970	COG1012	belongs to the aldehyde dehydrogenase family
SFV_RS06975	COG2095	MarC family integral membrane protein
SFV_RS06980	COG4166	transmembrane transport
SFV_RS06985	COG0601	transmembrane transport
SFV_RS06990	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SFV_RS06995	COG0444	Belongs to the ABC transporter superfamily
SFV_RS07000	COG4608	Belongs to the ABC transporter superfamily
SFV_RS07020	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
SFV_RS07035	COG2350	Protein conserved in bacteria
SFV_RS07045	COG1607	acyl-coa hydrolase
SFV_RS07060	COG3047	cAMP biosynthetic process
SFV_RS07065	COG3685	Protein conserved in bacteria
SFV_RS07070	COG3685	Protein conserved in bacteria
SFV_RS07075	COG3729	General stress protein
SFV_RS07090	COG0135	phosphoribosylanthranilate isomerase activity
SFV_RS07090	COG0134	indole-3-glycerol-phosphate synthase activity
SFV_RS07095	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
SFV_RS07095	COG0512	Glutamine amidotransferase of anthranilate synthase
SFV_RS07100	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SFV_RS07105	COG0613	PHP domain protein
SFV_RS07110	COG0009	L-threonylcarbamoyladenylate synthase
SFV_RS07120	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
SFV_RS07125	COG1028	Short-chain dehydrogenase reductase Sdr
SFV_RS07135	COG0616	signal peptide processing
SFV_RS07150	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SFV_RS07155	COG0583	DNA-binding transcription factor activity
SFV_RS07180	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
SFV_RS07190	COG0671	phosphoesterase, PA-phosphatase related
SFV_RS07195	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
SFV_RS07200	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
SFV_RS07210	COG0023	Translation Initiation Factor
SFV_RS07220	COG1349	DNA-binding transcription factor activity
SFV_RS07255	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
SFV_RS07255	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
SFV_RS07260	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
SFV_RS07270	COG2852	Protein conserved in bacteria
SFV_RS07275	COG4172	Belongs to the ABC transporter superfamily
SFV_RS07280	COG4172	Belongs to the ABC transporter superfamily
SFV_RS07285	COG4171	peptide transport system, permease
SFV_RS07290	COG4168	peptide transport system, permease
SFV_RS07295	COG4166	transmembrane transport
SFV_RS07310	COG0531	amino acid
SFV_RS07315	COG0174	glutamine synthetase
SFV_RS07330	COG1012	belongs to the aldehyde dehydrogenase family
SFV_RS07335	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SFV_RS07340	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
SFV_RS07345	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
SFV_RS07350	COG1842	Phage shock protein A
SFV_RS07360	COG1983	PspC domain protein
SFV_RS07370	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SFV_RS07375	COG0366	Alpha amylase catalytic
SFV_RS07395	COG1653	transport
SFV_RS07400	COG1653	transport
SFV_RS07405	COG1175	transmembrane transport
SFV_RS07410	COG0395	ABC-type sugar transport system, permease component
SFV_RS07415	COG1063	alcohol dehydrogenase
SFV_RS07430	COG1554	hydrolase, family 65, central catalytic
SFV_RS07435	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SFV_RS07455	COG1609	Transcriptional regulator
SFV_RS07460	COG3106	COG3106 Predicted ATPase
SFV_RS07470	COG3283	Transcriptional regulator of aromatic amino acids metabolism
SFV_RS07475	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
SFV_RS07480	COG4948	Mandelate Racemase Muconate Lactonizing
SFV_RS07485	COG2866	Carboxypeptidase
SFV_RS07490	COG0702	epimerase
SFV_RS07500	COG3547	Transposase (IS116 IS110 IS902 family)
SFV_RS07505	COG1073	alpha beta
SFV_RS07510	COG1073	alpha beta
SFV_RS07515	COG0583	DNA-binding transcription factor activity
SFV_RS07530	COG3756	Protein conserved in bacteria
SFV_RS07555	COG3756	Protein conserved in bacteria
SFV_RS07560	COG1484	DNA-dependent DNA replication
SFV_RS07655	COG4974	Belongs to the 'phage' integrase family
SFV_RS07685	COG5301	cellulose 1,4-beta-cellobiosidase activity
SFV_RS07695	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SFV_RS07700	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SFV_RS07705	COG1121	(ABC) transporter
SFV_RS07715	COG0582	viral genome integration into host DNA
SFV_RS07735	COG3436	PFAM IS66 Orf2 family protein
SFV_RS07740	COG4372	Transposase
SFV_RS07765	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
SFV_RS07780	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
SFV_RS07805	COG2995	paraquat-inducible protein a
SFV_RS07810	COG1956	GAF domain-containing protein
SFV_RS07820	COG0793	Belongs to the peptidase S41A family
SFV_RS07830	COG2814	Major facilitator Superfamily
SFV_RS07835	COG1414	Transcriptional regulator
SFV_RS07870	COG2226	methyltransferase
SFV_RS07900	COG3716	PTS system mannose fructose sorbose family IID component
SFV_RS07905	COG3715	PTS system
SFV_RS07910	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
SFV_RS07910	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SFV_RS07920	COG1253	flavin adenine dinucleotide binding
SFV_RS07925	COG2200	EAL domain
SFV_RS07930	COG1760	l-serine dehydratase
SFV_RS07940	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SFV_RS07955	COG0251	oxidation-reduction process
SFV_RS07960	COG1199	ATP-dependent helicase activity
SFV_RS07965	COG1214	PFAM Peptidase M22, glycoprotease
SFV_RS07970	COG3065	identical protein binding
SFV_RS07975	COG0318	PFAM AMP-dependent synthetase and ligase
SFV_RS07980	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
SFV_RS07985	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SFV_RS07990	COG4638	Rieske (2fe-2S)
SFV_RS08005	COG2766	serine protein kinase
SFV_RS08010	COG2766	serine protein kinase
SFV_RS08025	COG3713	MltA-interacting MipA family protein
SFV_RS08030	COG0656	L-ascorbic acid biosynthetic process
SFV_RS08035	COG0676	glucose-6-phosphate 1-epimerase activity
SFV_RS08040	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
SFV_RS08050	COG3139	Protein of unknown function (DUF1315)
SFV_RS08055	COG1063	alcohol dehydrogenase
SFV_RS08060	COG2271	Major facilitator Superfamily
SFV_RS08070	COG0191	fructose-bisphosphate aldolase activity
SFV_RS08075	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SFV_RS08080	COG0667	Aldo Keto reductase
SFV_RS08085	COG1349	DNA-binding transcription factor activity
SFV_RS08090	COG2814	Major facilitator Superfamily
SFV_RS08105	COG2814	Major facilitator Superfamily
SFV_RS08110	COG1335	isochorismatase
SFV_RS08115	COG0252	asparaginase activity
SFV_RS08120	COG0616	signal peptide processing
SFV_RS08130	COG0778	Nitroreductase
SFV_RS08145	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SFV_RS08170	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
SFV_RS08180	COG0494	nUDIX hydrolase
SFV_RS08185	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SFV_RS08190	COG2897	thiosulfate sulfurtransferase activity
SFV_RS08195	COG2897	thiosulfate sulfurtransferase activity
SFV_RS08200	COG4136	ATPase activity
SFV_RS08215	COG3385	transposase activity
SFV_RS08220	COG4134	Bacterial extracellular solute-binding protein
SFV_RS08225	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
SFV_RS08230	COG0398	Pfam SNARE associated Golgi protein
SFV_RS08240	COG0398	Pfam SNARE associated Golgi protein
SFV_RS08245	COG0708	Exodeoxyribonuclease III
SFV_RS08275	COG3678	ATP-independent chaperone mediated protein folding
SFV_RS08300	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SFV_RS08305	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SFV_RS08310	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
SFV_RS08315	COG1447	Phosphotransferase system cellobiose-specific component IIA
SFV_RS08325	COG1486	melibiose metabolic process
SFV_RS08335	COG0753	catalase activity
SFV_RS08355	COG1988	membrane-bound metal-dependent
SFV_RS08360	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SFV_RS08370	COG3001	Fructosamine kinase
SFV_RS08380	COG1105	Belongs to the carbohydrate kinase PfkB family
SFV_RS08385	COG3137	Salt-induced outer membrane protein
SFV_RS08455	COG0386	Belongs to the glutathione peroxidase family
SFV_RS08465	COG0791	NLP P60 protein
SFV_RS08470	COG3385	transposase activity
SFV_RS08475	COG2200	EAL domain
SFV_RS08485	COG4256	Hemin uptake protein
SFV_RS08505	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SFV_RS08505	COG0574	Belongs to the PEP-utilizing enzyme family
SFV_RS08510	COG0318	PFAM AMP-dependent synthetase and ligase
SFV_RS08515	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
SFV_RS08520	COG0644	oxidoreductase
SFV_RS08525	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
SFV_RS08530	COG2086	electron transfer activity
SFV_RS08540	COG2207	Transcriptional regulator
SFV_RS08540	COG1917	Cupin 2, conserved barrel domain protein
SFV_RS08570	COG3539	Fimbrial protein
SFV_RS08630	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
SFV_RS08655	COG2026	Addiction module toxin, RelE StbE family
SFV_RS08660	COG3077	Addiction module antitoxin, RelB DinJ family
SFV_RS08675	COG0477	Major facilitator Superfamily
SFV_RS08680	COG0246	Mannitol dehydrogenase
SFV_RS08690	COG1802	Transcriptional regulator
SFV_RS08700	COG0339	signal peptide processing
SFV_RS08705	COG1546	Belongs to the CinA family
SFV_RS08710	COG3111	PFAM Bacterial OB fold (BOF) protein
SFV_RS08765	COG4948	Mandelate Racemase Muconate Lactonizing
SFV_RS08770	COG2963	transposase activity
SFV_RS08835	COG3781	membrane
SFV_RS08860	COG2199	diguanylate cyclase activity
SFV_RS08870	COG2066	Belongs to the glutaminase family
SFV_RS08875	COG1012	belongs to the aldehyde dehydrogenase family
SFV_RS08905	COG1846	Transcriptional regulator
SFV_RS08910	COG4977	sequence-specific DNA binding
SFV_RS08920	COG0697	spore germination
SFV_RS08925	COG2814	Major facilitator Superfamily
SFV_RS08975	COG0243	molybdopterin cofactor binding
SFV_RS08985	COG0437	4 iron, 4 sulfur cluster binding
SFV_RS08990	COG3302	dmso reductase anchor subunit
SFV_RS09005	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
SFV_RS09010	COG1940	carbohydrate kinase activity
SFV_RS09015	COG0583	DNA-binding transcription factor activity
SFV_RS09035	COG3591	Belongs to the peptidase S1B family
SFV_RS09050	COG0628	permease
SFV_RS09055	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
SFV_RS09060	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
SFV_RS09070	COG0531	amino acid
SFV_RS09080	COG3136	membrane protein required for alginate biosynthesis
SFV_RS09085	COG0745	RESPONSE REGULATOR receiver
SFV_RS09090	COG1823	symporter activity
SFV_RS09095	COG2205	protein histidine kinase activity
SFV_RS09110	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
SFV_RS09110	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
SFV_RS09120	COG5339	Protein conserved in bacteria
SFV_RS09135	COG3250	beta-galactosidase activity
SFV_RS09140	COG1309	transcriptional regulator
SFV_RS09150	COG1028	Short-chain dehydrogenase reductase Sdr
SFV_RS09155	COG1609	Transcriptional regulator
SFV_RS09160	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SFV_RS09160	COG1263	PTS System
SFV_RS09165	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
SFV_RS09175	COG0673	inositol 2-dehydrogenase activity
SFV_RS09215	COG4659	FMN binding
SFV_RS09225	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
SFV_RS09235	COG3104	oligopeptide transport
SFV_RS09240	COG0625	glutathione transferase activity
SFV_RS09260	COG3895	Periplasmic Protein
SFV_RS09280	COG3133	Outer membrane lipoprotein
SFV_RS09295	COG1566	PFAM secretion protein HlyD family protein
SFV_RS09305	COG2032	superoxide dismutase activity
SFV_RS09310	COG4989	oxidoreductase activity
SFV_RS09315	COG3313	Fe-S protein
SFV_RS09320	COG1309	transcriptional regulator
SFV_RS09325	COG1902	pentaerythritol trinitrate reductase activity
SFV_RS09330	COG0346	lactoylglutathione lyase activity
SFV_RS09345	COG0675	Transposase, IS605 OrfB family
SFV_RS09360	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
SFV_RS09365	COG0791	NLP P60 protein
SFV_RS09370	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SFV_RS09375	COG2814	Major facilitator Superfamily
SFV_RS09390	COG0583	DNA-binding transcription factor activity
SFV_RS09395	COG2814	Major facilitator Superfamily
SFV_RS09400	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
SFV_RS09405	COG0307	riboflavin synthase, alpha
SFV_RS09415	COG3468	outer membrane autotransporter barrel domain protein
SFV_RS09435	COG4529	Protein conserved in bacteria
SFV_RS09445	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
SFV_RS09450	COG0437	4 iron, 4 sulfur cluster binding
SFV_RS09460	COG2414	aldehyde ferredoxin oxidoreductase
SFV_RS09465	COG2414	aldehyde ferredoxin oxidoreductase
SFV_RS09470	COG0437	4 iron, 4 sulfur cluster binding
SFV_RS09485	COG0469	pyruvate kinase activity
SFV_RS09490	COG4238	major outer membrane lipoprotein
SFV_RS09495	COG1376	ErfK ybiS ycfS ynhG family protein
SFV_RS09510	COG0719	Fe-S assembly protein
SFV_RS09515	COG0396	ATPase activity
SFV_RS09520	COG0719	Fe-S assembly protein
SFV_RS09525	COG0316	Belongs to the HesB IscA family
SFV_RS09535	COG2050	protein possibly involved in aromatic compounds catabolism
SFV_RS09540	COG0277	FAD linked oxidase domain protein
SFV_RS09540	COG0247	lactate metabolic process
SFV_RS09545	COG0628	permease
SFV_RS09555	COG0738	Major facilitator superfamily
SFV_RS09565	COG0738	Major facilitator superfamily
SFV_RS09570	COG2271	Major facilitator Superfamily
SFV_RS09595	COG3119	arylsulfatase activity
SFV_RS09600	COG0641	radical SAM
SFV_RS09620	COG4178	(ABC) transporter
SFV_RS09625	COG4771	TonB-dependent receptor
SFV_RS09630	COG0612	Peptidase, M16
SFV_RS09655	COG0076	glutamate decarboxylase activity
SFV_RS09660	COG0531	amino acid
SFV_RS09665	COG1649	PFAM Uncharacterised BCR, COG1649
SFV_RS09675	COG2199	diguanylate cyclase activity
SFV_RS09675	COG2200	EAL domain
SFV_RS09675	COG2202	Pas domain
SFV_RS09680	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
SFV_RS09685	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SFV_RS09690	COG0444	Belongs to the ABC transporter superfamily
SFV_RS09695	COG4608	Belongs to the ABC transporter superfamily
SFV_RS09700	COG1764	response to oxidative stress
SFV_RS09720	COG3093	addiction module antidote protein HigA
SFV_RS09725	COG2864	formate dehydrogenase
SFV_RS09730	COG0437	4 iron, 4 sulfur cluster binding
SFV_RS09735	COG0243	molybdopterin cofactor binding
SFV_RS09735	COG3383	formate dehydrogenase (NAD+) activity
SFV_RS09740	COG0243	molybdopterin cofactor binding
SFV_RS09740	COG3383	formate dehydrogenase (NAD+) activity
SFV_RS09745	COG0697	spore germination
SFV_RS09765	COG4886	Leucine-rich repeat (LRR) protein
SFV_RS09770	COG4886	Leucine-rich repeat (LRR) protein
SFV_RS09780	COG2223	nitrite transmembrane transporter activity
SFV_RS09785	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
SFV_RS09790	COG1140	nitrate reductase beta subunit
SFV_RS09805	COG1802	Transcriptional regulator
SFV_RS09810	COG2130	NADP-dependent
SFV_RS09825	COG1247	-acetyltransferase
SFV_RS09830	COG3238	Protein conserved in bacteria
SFV_RS09860	COG1177	transmembrane transport
SFV_RS09865	COG1176	ABC-type spermidine putrescine transport system, permease component I
SFV_RS09885	COG0675	Transposase, IS605 OrfB family
SFV_RS09900	COG0500	methyltransferase
SFV_RS09905	COG1275	C4-dicarboxylate transporter malic acid transport protein
SFV_RS09910	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
SFV_RS09915	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SFV_RS09920	COG2841	Protein conserved in bacteria
SFV_RS09935	COG5383	Protein conserved in bacteria
SFV_RS09940	COG0583	DNA-binding transcription factor activity
SFV_RS09945	COG0840	transmembrane signaling receptor activity
SFV_RS09950	COG2963	transposase activity
SFV_RS09975	COG3038	cytochrome b561
SFV_RS09985	COG1012	belongs to the aldehyde dehydrogenase family
SFV_RS09990	COG1434	Gram-negative-bacterium-type cell wall biogenesis
SFV_RS10000	COG1643	Atp-dependent helicase
SFV_RS10025	COG0671	phosphoesterase, PA-phosphatase related
SFV_RS10025	COG2453	phosphatase
SFV_RS10030	COG2267	carboxylic ester hydrolase activity
SFV_RS10035	COG4589	Belongs to the CDS family
SFV_RS10040	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
SFV_RS10055	COG3187	Heat shock protein
SFV_RS10060	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
SFV_RS10065	COG2911	Protein conserved in bacteria
SFV_RS10075	COG3784	Protein of unknown function (DUF1318)
SFV_RS10095	COG3187	Heat shock protein
SFV_RS10100	COG3042	response to heat
SFV_RS10105	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SFV_RS10105	COG0674	pyruvate-flavodoxin oxidoreductase activity
SFV_RS10105	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
SFV_RS10105	COG1013	pyruvate-flavodoxin oxidoreductase activity
SFV_RS10115	COG0589	response to stress
SFV_RS10125	COG0513	Belongs to the DEAD box helicase family
SFV_RS10140	COG3706	GGDEF domain
SFV_RS10145	COG2840	Smr protein MutS2
SFV_RS10180	COG2207	Transcriptional regulator
SFV_RS10190	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
SFV_RS10195	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
SFV_RS10200	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SFV_RS10205	COG0589	response to stress
SFV_RS10220	COG0668	transmembrane transport
SFV_RS10225	COG4166	transmembrane transport
SFV_RS10230	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
SFV_RS10235	COG0583	DNA-binding transcription factor activity
SFV_RS10250	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SFV_RS10280	COG0582	viral genome integration into host DNA
SFV_RS10295	COG1276	copper resistance
SFV_RS10300	COG2372	response to copper ion
SFV_RS10315	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
SFV_RS10320	COG1770	oligopeptidase
SFV_RS10325	COG2979	Protein of unknown function (DUF533)
SFV_RS10350	COG0800	Aldolase
SFV_RS10355	COG0129	dihydroxy-acid dehydratase activity
SFV_RS10360	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
SFV_RS10365	COG1737	Transcriptional regulator
SFV_RS10370	COG0469	pyruvate kinase activity
SFV_RS10380	COG0739	heme binding
SFV_RS10385	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
SFV_RS10395	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SFV_RS10420	COG0217	transcriptional regulatory protein
SFV_RS10425	COG0494	nUDIX hydrolase
SFV_RS10435	COG1335	isochorismatase
SFV_RS10440	COG3547	Transposase (IS116 IS110 IS902 family)
SFV_RS10445	COG1335	isochorismatase
SFV_RS10560	COG3547	Transposase (IS116 IS110 IS902 family)
SFV_RS10590	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
SFV_RS10665	COG1801	Protein of unknown function DUF72
SFV_RS10670	COG3788	relative of glutathione S-transferase, MAPEG superfamily
SFV_RS10685	COG0243	molybdopterin cofactor binding
SFV_RS10700	COG0243	molybdopterin cofactor binding
SFV_RS10705	COG3005	denitrification pathway
SFV_RS10715	COG3102	Protein conserved in bacteria
SFV_RS10725	COG3755	Protein conserved in bacteria
SFV_RS10755	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
SFV_RS10790	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
SFV_RS10795	COG0745	RESPONSE REGULATOR receiver
SFV_RS10805	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
SFV_RS10810	COG0840	transmembrane signaling receptor activity
SFV_RS10815	COG0840	transmembrane signaling receptor activity
SFV_RS10820	COG0835	chemotaxis
SFV_RS10825	COG2198	Histidine kinase
SFV_RS10825	COG0643	Histidine kinase
SFV_RS10830	COG1360	Flagellar Motor Protein
SFV_RS10835	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
SFV_RS10850	COG0589	response to stress
SFV_RS10860	COG1877	trehalose-phosphatase activity
SFV_RS10865	COG1172	Belongs to the binding-protein-dependent transport system permease family
SFV_RS10875	COG1879	ABC-type sugar transport system periplasmic component
SFV_RS10880	COG1528	Iron-storage protein
SFV_RS10900	COG1528	Iron-storage protein
SFV_RS10910	COG0814	amino acid
SFV_RS10915	COG3012	SEC-C Motif Domain Protein
SFV_RS10915	COG3318	Belongs to the UPF0149 family
SFV_RS10945	COG2197	response regulator
SFV_RS10960	COG2197	response regulator
SFV_RS10965	COG1126	abc transporter atp-binding protein
SFV_RS10970	COG0765	amino acid transport
SFV_RS10980	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SFV_RS10990	COG1191	sigma factor activity
SFV_RS11000	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
SFV_RS11005	COG1516	flagellar protein fliS
SFV_RS11015	COG0366	Alpha amylase catalytic
SFV_RS11025	COG2391	methyltransferase activity
SFV_RS11030	COG0425	Belongs to the sulfur carrier protein TusA family
SFV_RS11040	COG0675	Transposase, IS605 OrfB family
SFV_RS11045	COG0675	Transposase, IS605 OrfB family
SFV_RS11050	COG0675	Transposase, IS605 OrfB family
SFV_RS11065	COG2207	Transcriptional regulator
SFV_RS11070	COG1881	PFAM PEBP family protein
SFV_RS11075	COG2076	Multidrug Resistance protein
SFV_RS11100	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SFV_RS11105	COG1317	bacterial-type flagellum organization
SFV_RS11110	COG1157	protein secretion by the type III secretion system
SFV_RS11120	COG3144	bacterial-type flagellum assembly
SFV_RS11125	COG1580	Controls the rotational direction of flagella during chemotaxis
SFV_RS11130	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SFV_RS11135	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
SFV_RS11140	COG3190	flagellar
SFV_RS11145	COG1338	Plays a role in the flagellum-specific transport system
SFV_RS11150	COG1987	bacterial-type flagellum assembly
SFV_RS11155	COG1684	flagellar biosynthetic protein fliR
SFV_RS11160	COG2197	response regulator
SFV_RS11190	COG3706	GGDEF domain
SFV_RS11195	COG5475	Uncharacterized small protein (DUF2158)
SFV_RS11200	COG2354	Protein conserved in bacteria
SFV_RS11205	COG0697	spore germination
SFV_RS11210	COG3727	T/G mismatch-specific endonuclease activity
SFV_RS11215	COG0270	DNA (cytosine-5-)-methyltransferase activity
SFV_RS11230	COG2801	Transposase and inactivated derivatives
SFV_RS11235	COG2963	transposase activity
SFV_RS11240	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
SFV_RS11255	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
SFV_RS11280	COG2205	protein histidine kinase activity
SFV_RS11285	COG0745	RESPONSE REGULATOR receiver
SFV_RS11290	COG2351	hydroxyisourate hydrolase activity
SFV_RS11305	COG3443	Belongs to the bacterial solute-binding protein 9 family
SFV_RS11320	COG0500	methyltransferase
SFV_RS11360	COG3436	PFAM IS66 Orf2 family protein
SFV_RS11400	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
SFV_RS11405	COG1403	HNH endonuclease
SFV_RS11410	COG1403	HNH endonuclease
SFV_RS11495	COG0477	Major facilitator Superfamily
SFV_RS11510	COG0477	Major facilitator Superfamily
SFV_RS11515	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
SFV_RS11530	COG0534	Mate efflux family protein
SFV_RS11535	COG0534	Mate efflux family protein
SFV_RS11540	COG0534	Mate efflux family protein
SFV_RS11550	COG0583	DNA-binding transcription factor activity
SFV_RS11555	COG0583	DNA-binding transcription factor activity
SFV_RS11565	COG1376	ErfK ybiS ycfS ynhG family protein
SFV_RS11580	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
SFV_RS11620	COG0582	viral genome integration into host DNA
SFV_RS11625	COG2925	Exonuclease
SFV_RS11630	COG0425	Belongs to the sulfur carrier protein TusA family
SFV_RS11635	COG2391	methyltransferase activity
SFV_RS11640	COG0531	amino acid
SFV_RS11645	COG0583	DNA-binding transcription factor activity
SFV_RS11650	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SFV_RS11655	COG4115	mRNA cleavage
SFV_RS11795	COG1210	Utp--glucose-1-phosphate uridylyltransferase
SFV_RS11805	COG0438	transferase activity, transferring glycosyl groups
SFV_RS11810	COG2327	Polysaccharide pyruvyl transferase
SFV_RS11815	COG2244	polysaccharide biosynthetic process
SFV_RS11820	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
SFV_RS11830	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
SFV_RS11830	COG0662	Cupin 2, conserved barrel domain protein
SFV_RS11835	COG0297	glycogen (starch) synthase activity
SFV_RS11840	COG1051	belongs to the nudix hydrolase family
SFV_RS11845	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SFV_RS11850	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
SFV_RS11855	COG0110	maltose O-acetyltransferase activity
SFV_RS11870	COG1216	Glycosyl transferase, family 2
SFV_RS11880	COG0438	transferase activity, transferring glycosyl groups
SFV_RS11885	COG1045	serine acetyltransferase
SFV_RS11890	COG0463	Glycosyl transferase, family 2
SFV_RS11895	COG0489	protein tyrosine kinase activity
SFV_RS11895	COG3206	protein involved in exopolysaccharide biosynthesis
SFV_RS11900	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
SFV_RS11905	COG1596	polysaccharide export
SFV_RS11910	COG1253	flavin adenine dinucleotide binding
SFV_RS11915	COG2982	Protein involved in outer membrane biogenesis
SFV_RS11925	COG0572	uridine kinase
SFV_RS11930	COG5002	protein histidine kinase activity
SFV_RS11930	COG3447	MASE1 domain protein
SFV_RS11930	COG5001	Diguanylate cyclase
SFV_RS11935	COG3547	Transposase (IS116 IS110 IS902 family)
SFV_RS11940	COG4245	von Willebrand factor, type A
SFV_RS11945	COG0631	protein serine/threonine phosphatase activity
SFV_RS11950	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
SFV_RS11955	COG0443	Heat shock 70 kDa protein
SFV_RS11960	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
SFV_RS11970	COG3547	Transposase (IS116 IS110 IS902 family)
SFV_RS11995	COG2205	protein histidine kinase activity
SFV_RS12000	COG0745	RESPONSE REGULATOR receiver
SFV_RS12010	COG0826	peptidase U32
SFV_RS12040	COG3775	system Galactitol-specific IIC component
SFV_RS12045	COG3414	Phosphotransferase system galactitol-specific IIB component
SFV_RS12065	COG1830	Aldolase
SFV_RS12070	COG2211	Major facilitator Superfamily
SFV_RS12080	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SFV_RS12085	COG2188	Transcriptional regulator
SFV_RS12090	COG3757	hydrolase, family 25
SFV_RS12095	COG0351	phosphomethylpyrimidine kinase
SFV_RS12115	COG5455	response to cobalt ion
SFV_RS12125	COG3188	usher protein
SFV_RS12130	COG3121	Chaperone
SFV_RS12145	COG3539	Fimbrial protein
SFV_RS12160	COG0489	protein tyrosine kinase activity
SFV_RS12190	COG3831	ATPase activity
SFV_RS12195	COG3831	ATPase activity
SFV_RS12205	COG4808	Protein conserved in bacteria
SFV_RS12210	COG4807	Protein conserved in bacteria
SFV_RS12220	COG3275	phosphorelay sensor kinase activity
SFV_RS12225	COG3385	transposase activity
SFV_RS12240	COG0500	methyltransferase
SFV_RS12260	COG5301	cellulose 1,4-beta-cellobiosidase activity
SFV_RS12285	COG3539	Fimbrial protein
SFV_RS12295	COG5301	cellulose 1,4-beta-cellobiosidase activity
SFV_RS12315	COG0582	viral genome integration into host DNA
SFV_RS12320	COG0789	Transcriptional regulator
SFV_RS12345	COG1174	glycine betaine transport
SFV_RS12350	COG1125	glycine betaine transport
SFV_RS12355	COG1174	glycine betaine transport
SFV_RS12360	COG1732	Glycine betaine
SFV_RS12365	COG1472	Belongs to the glycosyl hydrolase 3 family
SFV_RS12370	COG0277	FAD linked oxidase domain protein
SFV_RS12375	COG1686	Belongs to the peptidase S11 family
SFV_RS12385	COG0586	Pfam SNARE associated Golgi protein
SFV_RS12415	COG1346	cytolysis
SFV_RS12425	COG2949	membrane
SFV_RS12435	COG0493	'glutamate synthase
SFV_RS12445	COG4211	Belongs to the binding-protein-dependent transport system permease family
SFV_RS12455	COG1879	ABC-type sugar transport system periplasmic component
SFV_RS12460	COG1609	Transcriptional regulator
SFV_RS12470	COG2311	Membrane
SFV_RS12490	COG4771	TonB-dependent receptor
SFV_RS12500	COG0833	amino acid
SFV_RS12505	COG0583	DNA-binding transcription factor activity
SFV_RS12510	COG2855	membrane
SFV_RS12520	COG1522	sequence-specific DNA binding
SFV_RS12520	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SFV_RS12525	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SFV_RS12535	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SFV_RS12540	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SFV_RS12545	COG2313	pseudouridylate synthase activity
SFV_RS12550	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SFV_RS12555	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
SFV_RS12555	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SFV_RS12555	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SFV_RS12560	COG1105	Belongs to the carbohydrate kinase PfkB family
SFV_RS12565	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
SFV_RS12565	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SFV_RS12570	COG2814	Major facilitator Superfamily
SFV_RS12590	COG0246	Mannitol dehydrogenase
SFV_RS12595	COG0523	cobalamin synthesis protein
SFV_RS12600	COG0671	phosphoesterase, PA-phosphatase related
SFV_RS12605	COG0791	NLP P60 protein
SFV_RS12610	COG2200	EAL domain
SFV_RS12615	COG4166	transmembrane transport
SFV_RS12620	COG4174	ABC transporter (Permease)
SFV_RS12625	COG4239	(ABC) transporter, permease
SFV_RS12630	COG4172	Belongs to the ABC transporter superfamily
SFV_RS12640	COG2814	Major facilitator Superfamily
SFV_RS12645	COG1187	pseudouridine synthase activity
SFV_RS12650	COG1061	Type III restriction enzyme res subunit
SFV_RS12670	COG3083	sulfuric ester hydrolase activity
SFV_RS12680	COG3468	outer membrane autotransporter barrel domain protein
SFV_RS12690	COG2197	response regulator
SFV_RS12695	COG3088	subunit of a heme lyase
SFV_RS12695	COG4235	cytochrome complex assembly
SFV_RS12700	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SFV_RS12705	COG1138	Cytochrome C-type biogenesis protein
SFV_RS12715	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SFV_RS12720	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SFV_RS12725	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SFV_RS12735	COG3005	denitrification pathway
SFV_RS12740	COG3043	anaerobic respiration
SFV_RS12745	COG0348	domain, Protein
SFV_RS12750	COG0437	4 iron, 4 sulfur cluster binding
SFV_RS12760	COG3062	negative regulation of establishment of protein localization
SFV_RS12765	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
SFV_RS12765	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
SFV_RS12790	COG4615	Cyclic peptide transporter
SFV_RS12795	COG3145	DNA-N1-methyladenine dioxygenase activity
SFV_RS12800	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
SFV_RS12800	COG2169	Transcriptional regulator
SFV_RS12805	COG1477	protein flavinylation
SFV_RS12820	COG2198	Histidine kinase
SFV_RS12820	COG0642	Histidine kinase
SFV_RS12825	COG2197	response regulator
SFV_RS12830	COG2205	protein histidine kinase activity
SFV_RS12830	COG0784	Response regulator, receiver
SFV_RS12835	COG4676	Protein conserved in bacteria
SFV_RS12840	COG5445	Predicted secreted protein (DUF2300)
SFV_RS12845	COG2373	Large extracellular alpha-helical protein
SFV_RS12860	COG2373	Large extracellular alpha-helical protein
SFV_RS12865	COG3234	Protein of unknown function (DUF1175)
SFV_RS12875	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SFV_RS12905	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SFV_RS12910	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SFV_RS12915	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
SFV_RS12920	COG3642	lipopolysaccharide core region biosynthetic process
SFV_RS12925	COG0583	DNA-binding transcription factor activity
SFV_RS12930	COG0584	glycerophosphoryl diester phosphodiesterase
SFV_RS12935	COG2271	Major facilitator Superfamily
SFV_RS12940	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
SFV_RS12950	COG0247	lactate metabolic process
SFV_RS12955	COG5464	transposase or invertase
SFV_RS13025	COG0318	PFAM AMP-dependent synthetase and ligase
SFV_RS13035	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
SFV_RS13050	COG1169	isochorismate synthase
SFV_RS13055	COG4575	ribosome binding
SFV_RS13060	COG2153	protein acetylation
SFV_RS13070	COG5160	protein modification by small protein removal
SFV_RS13090	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SFV_RS13095	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SFV_RS13105	COG0839	Belongs to the complex I subunit 6 family
SFV_RS13125	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
SFV_RS13130	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
SFV_RS13150	COG0583	DNA-binding transcription factor activity
SFV_RS13155	COG0436	Aminotransferase
SFV_RS13165	COG0471	metal ion transport
SFV_RS13165	COG0490	domain, Protein
SFV_RS13170	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SFV_RS13190	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
SFV_RS13195	COG0280	phosphate acetyltransferase
SFV_RS13195	COG0857	belongs to the CobB CobQ family
SFV_RS13200	COG1288	antiporter activity
SFV_RS13210	COG0622	Phosphoesterase
SFV_RS13215	COG0625	glutathione transferase activity
SFV_RS13220	COG0625	glutathione transferase activity
SFV_RS13225	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
SFV_RS13230	COG1090	epimerase
SFV_RS13235	COG5464	transposase or invertase
SFV_RS13240	COG4598	ABC transporter
SFV_RS13245	COG4160	amino acid transport
SFV_RS13250	COG4215	(ABC) transporter
SFV_RS13255	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SFV_RS13260	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SFV_RS13275	COG0163	prenyltransferase activity
SFV_RS13280	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
SFV_RS13285	COG1286	toxin biosynthetic process
SFV_RS13290	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
SFV_RS13295	COG0285	dihydrofolate synthase activity
SFV_RS13305	COG0586	Pfam SNARE associated Golgi protein
SFV_RS13315	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SFV_RS13335	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
SFV_RS13350	COG3101	peptidyl-lysine hydroxylation
SFV_RS13355	COG0730	response to heat
SFV_RS13385	COG3539	Fimbrial protein
SFV_RS13390	COG3539	Fimbrial protein
SFV_RS13395	COG3539	Fimbrial protein
SFV_RS13400	COG3121	Chaperone
SFV_RS13410	COG3539	Fimbrial protein
SFV_RS13415	COG2062	phosphohistidine phosphatase, SixA
SFV_RS13430	COG3691	Protein conserved in bacteria
SFV_RS13445	COG2853	Lipoprotein
SFV_RS13450	COG2116	formate transmembrane transporter activity
SFV_RS13460	COG0582	viral genome integration into host DNA
SFV_RS13480	COG3385	transposase activity
SFV_RS13495	COG2610	gluconate transmembrane transporter activity
SFV_RS13505	COG0477	Major facilitator Superfamily
SFV_RS13510	COG1566	PFAM secretion protein HlyD family protein
SFV_RS13515	COG2197	response regulator
SFV_RS13520	COG2205	protein histidine kinase activity
SFV_RS13520	COG2198	Histidine kinase
SFV_RS13520	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SFV_RS13520	COG0784	Response regulator, receiver
SFV_RS13525	COG1804	L-carnitine dehydratase bile acid-inducible protein F
SFV_RS13530	COG0679	Auxin Efflux Carrier
SFV_RS13535	COG0028	Belongs to the TPP enzyme family
SFV_RS13565	COG1560	Kdo2-lipid A biosynthetic process
SFV_RS13570	COG0436	Aminotransferase
SFV_RS13580	COG3279	Response regulator of the LytR AlgR family
SFV_RS13585	COG2207	Transcriptional regulator
SFV_RS13595	COG1363	Peptidase, m42
SFV_RS13605	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SFV_RS13640	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SFV_RS13645	COG2200	EAL domain
SFV_RS13645	COG2199	diguanylate cyclase activity
SFV_RS13655	COG3415	Transposase
SFV_RS13660	COG3415	Transposase
SFV_RS13690	COG0583	DNA-binding transcription factor activity
SFV_RS13695	COG0385	Bile acid
SFV_RS13700	COG3530	Putative quorum-sensing-regulated virulence factor
SFV_RS13720	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SFV_RS13725	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SFV_RS13730	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SFV_RS13735	COG2190	(PTS) system
SFV_RS13755	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SFV_RS13765	COG4208	sulfate ABC transporter
SFV_RS13770	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
SFV_RS13775	COG4150	thiosulfate binding
SFV_RS13780	COG1028	Short-chain dehydrogenase reductase Sdr
SFV_RS13795	COG1263	PTS System
SFV_RS13795	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SFV_RS13800	COG2837	iron assimilation
SFV_RS13820	COG0860	N-Acetylmuramoyl-L-alanine amidase
SFV_RS13830	COG2207	Transcriptional regulator
SFV_RS13835	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
SFV_RS13840	COG4816	utilization protein
SFV_RS13885	COG0076	glutamate decarboxylase activity
SFV_RS13890	COG0076	glutamate decarboxylase activity
SFV_RS13895	COG0531	amino acid
SFV_RS13900	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
SFV_RS13940	COG4819	ethanolamine utilization protein
SFV_RS13950	COG4917	ethanolamine utilization protein
SFV_RS13955	COG4810	utilization protein
SFV_RS13960	COG0281	malic enzyme
SFV_RS13960	COG0280	phosphate acetyltransferase
SFV_RS13970	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
SFV_RS13975	COG5342	invasion associated locus B
SFV_RS13985	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SFV_RS13985	COG0493	'glutamate synthase
SFV_RS13995	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SFV_RS14005	COG1393	Belongs to the ArsC family
SFV_RS14020	COG0400	carboxylic ester hydrolase activity
SFV_RS14030	COG2321	neutral zinc metallopeptidase
SFV_RS14045	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
SFV_RS14055	COG2716	regulation of RNA biosynthetic process
SFV_RS14060	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
SFV_RS14065	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SFV_RS14070	COG0651	ATP synthesis coupled electron transport
SFV_RS14075	COG0651	ATP synthesis coupled electron transport
SFV_RS14080	COG0650	Formate hydrogenlyase subunit 4
SFV_RS14085	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SFV_RS14090	COG4237	Hydrogenase 4 membrane
SFV_RS14095	COG0651	ATP synthesis coupled electron transport
SFV_RS14105	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SFV_RS14110	COG3260	NADH ubiquinone oxidoreductase 20
SFV_RS14120	COG3604	Transcriptional regulator
SFV_RS14125	COG2116	formate transmembrane transporter activity
SFV_RS14130	COG2116	formate transmembrane transporter activity
SFV_RS14135	COG0628	permease
SFV_RS14140	COG4783	chaperone-mediated protein folding
SFV_RS14145	COG1393	Belongs to the ArsC family
SFV_RS14155	COG2233	PERMEase
SFV_RS14170	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
SFV_RS14175	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
SFV_RS14180	COG0248	Ppx GppA phosphatase
SFV_RS14200	COG2200	EAL domain
SFV_RS14215	COG3133	Outer membrane lipoprotein
SFV_RS14230	COG0516	GMP reductase activity
SFV_RS14230	COG0517	IMP dehydrogenase activity
SFV_RS14240	COG1645	bacterial-type flagellum-dependent swarming motility
SFV_RS14255	COG2976	Protein conserved in bacteria
SFV_RS14285	COG4953	penicillin-binding protein 1C
SFV_RS14295	COG2897	thiosulfate sulfurtransferase activity
SFV_RS14310	COG2975	iron-sulfur cluster assembly
SFV_RS14315	COG0633	Ferredoxin
SFV_RS14335	COG0822	iron-sulfur transferase activity
SFV_RS14355	COG0483	inositol monophosphate 1-phosphatase activity
SFV_RS14360	COG1073	alpha beta
SFV_RS14365	COG3711	transcriptional antiterminator
SFV_RS14370	COG2814	Major facilitator Superfamily
SFV_RS14375	COG0583	DNA-binding transcription factor activity
SFV_RS14410	COG2017	converts alpha-aldose to the beta-anomer
SFV_RS14415	COG1063	alcohol dehydrogenase
SFV_RS14420	COG1172	Belongs to the binding-protein-dependent transport system permease family
SFV_RS14425	COG1129	ABC transporter
SFV_RS14430	COG1879	ABC-type sugar transport system periplasmic component
SFV_RS14440	COG1940	carbohydrate kinase activity
SFV_RS14455	COG0347	Belongs to the P(II) protein family
SFV_RS14460	COG2204	response regulator
SFV_RS14465	COG3170	Tfp pilus assembly protein FimV
SFV_RS14470	COG2205	protein histidine kinase activity
SFV_RS14490	COG0560	Phosphoserine phosphatase
SFV_RS14495	COG1737	Transcriptional regulator
SFV_RS14520	COG5301	cellulose 1,4-beta-cellobiosidase activity
SFV_RS14545	COG4771	TonB-dependent receptor
SFV_RS14575	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
SFV_RS14630	COG0681	Belongs to the peptidase S26 family
SFV_RS14640	COG3086	response to oxidative stress
SFV_RS14645	COG3026	antisigma factor binding
SFV_RS14650	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
SFV_RS14655	COG1595	DNA-templated transcription, initiation
SFV_RS14675	COG0513	Belongs to the DEAD box helicase family
SFV_RS14680	COG0583	DNA-binding transcription factor activity
SFV_RS14700	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SFV_RS14710	COG3118	belongs to the thioredoxin family
SFV_RS14715	COG3148	PFAM DTW domain containing protein
SFV_RS14720	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SFV_RS14720	COG1042	CoA-binding domain protein
SFV_RS14720	COG0045	succinate-CoA ligase (ADP-forming) activity
SFV_RS14725	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
SFV_RS14730	COG5544	Lipoprotein
SFV_RS14735	COG0477	Major facilitator Superfamily
SFV_RS14760	COG3385	transposase activity
SFV_RS14765	COG3385	transposase activity
SFV_RS14770	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SFV_RS14775	COG0564	pseudouridine synthase activity
SFV_RS14785	COG0542	response to heat
SFV_RS14790	COG3385	transposase activity
SFV_RS14795	COG1611	Belongs to the LOG family
SFV_RS14815	COG3098	single-species biofilm formation
SFV_RS14820	COG0564	pseudouridine synthase activity
SFV_RS14825	COG0716	FMN binding
SFV_RS14830	COG2271	Major facilitator Superfamily
SFV_RS14835	COG4948	Mandelate Racemase Muconate Lactonizing
SFV_RS14840	COG4948	Mandelate Racemase Muconate Lactonizing
SFV_RS14855	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
SFV_RS14860	COG3956	TIGRFAM MazG family protein
SFV_RS14875	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
SFV_RS14885	COG0602	queuosine metabolic process
SFV_RS14900	COG0277	FAD linked oxidase domain protein
SFV_RS14905	COG0477	Major facilitator Superfamily
SFV_RS14910	COG2086	electron transfer activity
SFV_RS14915	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
SFV_RS14985	COG1484	DNA-dependent DNA replication
SFV_RS14990	COG0305	Participates in initiation and elongation during chromosome replication
SFV_RS15040	COG3772	lysozyme
SFV_RS15215	COG5301	cellulose 1,4-beta-cellobiosidase activity
SFV_RS15240	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
SFV_RS15245	COG0644	oxidoreductase
SFV_RS15250	COG0720	synthase
SFV_RS15280	COG2234	aminopeptidase activity
SFV_RS15335	COG1388	LysM domain
SFV_RS15335	COG4942	peptidase
SFV_RS15340	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SFV_RS15355	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
SFV_RS15365	COG3423	Transcriptional regulator
SFV_RS15390	COG3395	kinase activity
SFV_RS15395	COG2084	Dehydrogenase
SFV_RS15400	COG1349	DNA-binding transcription factor activity
SFV_RS15425	COG3604	Transcriptional regulator
SFV_RS15430	COG0309	Hydrogenase expression formation protein (HypE)
SFV_RS15435	COG0409	Hydrogenase expression formation protein
SFV_RS15440	COG0298	carbon dioxide binding
SFV_RS15445	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
SFV_RS15450	COG0375	protein maturation
SFV_RS15465	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SFV_RS15470	COG0651	ATP synthesis coupled electron transport
SFV_RS15475	COG0650	Formate hydrogenlyase subunit 4
SFV_RS15480	COG3261	NADH dehydrogenase
SFV_RS15480	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
SFV_RS15485	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SFV_RS15490	COG3260	NADH ubiquinone oxidoreductase 20
SFV_RS15500	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
SFV_RS15515	COG5499	transcription regulator containing HTH domain
SFV_RS15520	COG2723	6-phospho-beta-galactosidase activity
SFV_RS15525	COG1263	PTS System
SFV_RS15525	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SFV_RS15530	COG1609	Transcriptional regulator
SFV_RS15535	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SFV_RS15540	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
SFV_RS15565	COG1349	DNA-binding transcription factor activity
SFV_RS15570	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
SFV_RS15575	COG1028	Short-chain dehydrogenase reductase Sdr
SFV_RS15590	COG3730	PTS system glucitol sorbitol-specific
SFV_RS15595	COG2951	lytic endotransglycosylase activity
SFV_RS15600	COG1546	Belongs to the CinA family
SFV_RS15625	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
SFV_RS15650	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SFV_RS15655	COG1238	metal cluster binding
SFV_RS15670	COG2814	Major facilitator Superfamily
SFV_RS15680	COG1846	Transcriptional regulator
SFV_RS15690	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
SFV_RS15695	COG2814	Major facilitator Superfamily
SFV_RS15700	COG2814	Major facilitator Superfamily
SFV_RS15705	COG2113	Glycine betaine
SFV_RS15710	COG4176	ABC-type proline glycine betaine transport system permease component
SFV_RS15715	COG4175	Glycine betaine
SFV_RS15720	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SFV_RS15725	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SFV_RS15735	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SFV_RS15740	COG4575	ribosome binding
SFV_RS15755	COG2916	Histone family protein nucleoid-structuring protein H-NS
SFV_RS15760	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SFV_RS15765	COG0640	Transcriptional regulator
SFV_RS15770	COG0401	homolog of Blt101
SFV_RS15775	COG1652	LysM domain
SFV_RS15780	COG1802	Transcriptional regulator
SFV_RS15785	COG1113	amino acid transport
SFV_RS15790	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
SFV_RS15800	COG0579	oxidoreductase
SFV_RS15810	COG0366	Alpha amylase catalytic
SFV_RS15825	COG2801	Transposase and inactivated derivatives
SFV_RS15840	COG0582	viral genome integration into host DNA
SFV_RS15850	COG2867	negative regulation of translational initiation
SFV_RS15860	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SFV_RS15865	COG0497	DNA recombination
SFV_RS15880	COG4536	flavin adenine dinucleotide binding
SFV_RS15885	COG4137	Cytochrome C assembly protein
SFV_RS15890	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SFV_RS15915	COG2885	chlorophyll binding
SFV_RS15935	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
SFV_RS15940	COG1605	Chorismate mutase
SFV_RS15940	COG0287	Prephenate dehydrogenase
SFV_RS15945	COG0077	Prephenate dehydratase
SFV_RS15945	COG1605	Chorismate mutase
SFV_RS15950	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
SFV_RS15960	COG3385	transposase activity
SFV_RS15965	COG0814	amino acid
SFV_RS15970	COG1760	l-serine dehydratase
SFV_RS15980	COG1454	alcohol dehydrogenase
SFV_RS15985	COG0235	Class ii aldolase
SFV_RS15990	COG0738	Major facilitator superfamily
SFV_RS16015	COG1349	DNA-binding transcription factor activity
SFV_RS16025	COG2363	Small membrane protein
SFV_RS16030	COG0583	DNA-binding transcription factor activity
SFV_RS16040	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
SFV_RS16045	COG2166	iron-sulfur cluster assembly
SFV_RS16050	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
SFV_RS16055	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
SFV_RS16070	COG0860	N-Acetylmuramoyl-L-alanine amidase
SFV_RS16080	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SFV_RS16085	COG1074	ATP-dependent DNA helicase activity
SFV_RS16095	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
SFV_RS16100	COG4967	type IV pilus modification protein PilV
SFV_RS16110	COG4795	General secretion pathway protein
SFV_RS16130	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
SFV_RS16155	COG0861	Integral membrane protein TerC family
SFV_RS16165	COG0667	Aldo Keto reductase
SFV_RS16180	COG1609	Transcriptional regulator
SFV_RS16190	COG0583	DNA-binding transcription factor activity
SFV_RS16195	COG1794	racemase activity, acting on amino acids and derivatives
SFV_RS16205	COG1028	Short-chain dehydrogenase reductase Sdr
SFV_RS16215	COG0183	Belongs to the thiolase family
SFV_RS16230	COG2801	Transposase and inactivated derivatives
SFV_RS16235	COG3387	PFAM Glycoside hydrolase 15-related
SFV_RS16245	COG4942	peptidase
SFV_RS16260	COG1529	Aldehyde oxidase and xanthine dehydrogenase
SFV_RS16265	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
SFV_RS16270	COG2080	2 iron, 2 sulfur cluster binding
SFV_RS16290	COG2233	PERMEase
SFV_RS16315	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SFV_RS16320	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
SFV_RS16325	COG4974	Belongs to the 'phage' integrase family
SFV_RS16330	COG0716	FMN binding
SFV_RS16350	COG1272	protein, Hemolysin III
SFV_RS16385	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
SFV_RS16390	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
SFV_RS16395	COG0006	proline dipeptidase activity
SFV_RS16410	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
SFV_RS16420	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SFV_RS16435	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
SFV_RS16435	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
SFV_RS16440	COG1703	isobutyryl-CoA mutase activity
SFV_RS16445	COG1024	Enoyl-CoA hydratase
SFV_RS16450	COG0427	acetyl-CoA hydrolase
SFV_RS16455	COG0583	DNA-binding transcription factor activity
SFV_RS16460	COG2968	Membrane
SFV_RS16470	COG0668	transmembrane transport
SFV_RS16475	COG0191	fructose-bisphosphate aldolase activity
SFV_RS16505	COG1122	ATPase activity
SFV_RS16510	COG1122	ATPase activity
SFV_RS16515	COG1072	(Pantothenic acid kinase))
SFV_RS16525	COG1494	fructose-1,6-bisphosphatase
SFV_RS16530	COG1063	alcohol dehydrogenase
SFV_RS16540	COG0330	HflC and HflK could
SFV_RS16545	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
SFV_RS16550	COG0501	Belongs to the peptidase M48B family
SFV_RS16595	COG2814	Major facilitator Superfamily
SFV_RS16605	COG2356	endonuclease I
SFV_RS16610	COG1385	rRNA (uridine-N3-)-methyltransferase activity
SFV_RS16630	COG2805	Type II/IV secretion system protein
SFV_RS16635	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SFV_RS16640	COG0762	integral membrane protein
SFV_RS16655	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SFV_RS16665	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
SFV_RS16680	COG0252	asparaginase activity
SFV_RS16695	COG3171	Protein conserved in bacteria
SFV_RS16705	COG1194	a g-specific adenine glycosylase
SFV_RS16720	COG2211	Major facilitator Superfamily
SFV_RS16725	COG1982	Orn Lys Arg decarboxylase major
SFV_RS16730	COG1811	Na channel or pump
SFV_RS16750	COG1620	l-lactate permease
SFV_RS16760	COG3193	protein, possibly involved in utilization of glycolate and propanediol
SFV_RS16770	COG0277	FAD linked oxidase domain protein
SFV_RS16775	COG0277	FAD linked oxidase domain protein
SFV_RS16780	COG0277	FAD linked oxidase domain protein
SFV_RS16785	COG2186	Transcriptional regulator
SFV_RS16800	COG0306	phosphate transporter
SFV_RS16805	COG0754	glutathionylspermidine amidase activity
SFV_RS16810	COG0625	glutathione transferase activity
SFV_RS16815	COG0298	carbon dioxide binding
SFV_RS16825	COG1773	rubredoxin
SFV_RS16830	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
SFV_RS16835	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
SFV_RS16840	COG5557	Pfam Polysulphide reductase, NrfD
SFV_RS16845	COG0437	4 iron, 4 sulfur cluster binding
SFV_RS16850	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
SFV_RS16870	COG0667	Aldo Keto reductase
SFV_RS16880	COG1028	Short-chain dehydrogenase reductase Sdr
SFV_RS16885	COG0848	biopolymer transport protein
SFV_RS16890	COG0811	peptide transport
SFV_RS16900	COG0626	cystathionine gamma-synthase activity
SFV_RS16905	COG0586	Pfam SNARE associated Golgi protein
SFV_RS16920	COG1979	alcohol dehydrogenase
SFV_RS16925	COG0656	L-ascorbic acid biosynthetic process
SFV_RS16935	COG4238	major outer membrane lipoprotein
SFV_RS16945	COG2132	Multicopper oxidase
SFV_RS16950	COG0204	Acyl-transferase
SFV_RS16955	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SFV_RS16965	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
SFV_RS16970	COG3111	PFAM Bacterial OB fold (BOF) protein
SFV_RS16975	COG0745	RESPONSE REGULATOR receiver
SFV_RS16980	COG0642	Histidine kinase
SFV_RS16990	COG2249	NAD(P)H dehydrogenase (quinone) activity
SFV_RS16995	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
SFV_RS17000	COG0187	DNA topoisomerase II activity
SFV_RS17005	COG3150	esterase
SFV_RS17010	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
SFV_RS17015	COG3151	Protein conserved in bacteria
SFV_RS17020	COG0494	nUDIX hydrolase
SFV_RS17025	COG1538	Outer membrane efflux protein
SFV_RS17040	COG0754	glutathionylspermidine amidase activity
SFV_RS17045	COG3384	dioxygenase
SFV_RS17065	COG2960	long-chain fatty acid transporting porin activity
SFV_RS17085	COG2268	Band 7 protein
SFV_RS17110	COG3025	triphosphatase activity
SFV_RS17120	COG4991	sh3 domain protein
SFV_RS17135	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
SFV_RS17145	COG0583	DNA-binding transcription factor activity
SFV_RS17155	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
SFV_RS17170	COG0828	Belongs to the bacterial ribosomal protein bS21 family
SFV_RS17175	COG0358	DNA primase activity
SFV_RS17180	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SFV_RS17185	COG3385	transposase activity
SFV_RS17205	COG1695	Transcriptional regulator
SFV_RS17225	COG1609	Transcriptional regulator
SFV_RS17230	COG3250	beta-galactosidase activity
SFV_RS17235	COG2731	YhcH YjgK YiaL family protein
SFV_RS17240	COG0531	amino acid
SFV_RS17260	COG1902	pentaerythritol trinitrate reductase activity
SFV_RS17260	COG0446	pyridine nucleotide-disulphide oxidoreductase
SFV_RS17265	COG5499	transcription regulator containing HTH domain
SFV_RS17270	COG4680	protein conserved in bacteria
SFV_RS17290	COG2949	membrane
SFV_RS17295	COG0673	inositol 2-dehydrogenase activity
SFV_RS17300	COG0861	Integral membrane protein TerC family
SFV_RS17305	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
SFV_RS17315	COG2721	sulfolactate sulfo-lyase activity
SFV_RS17325	COG2271	Major facilitator Superfamily
SFV_RS17345	COG2186	Transcriptional regulator
SFV_RS17350	COG0586	Pfam SNARE associated Golgi protein
SFV_RS17360	COG1422	Protein of unknown function (DUF1090)
SFV_RS17365	COG4575	ribosome binding
SFV_RS17370	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
SFV_RS17380	COG2259	Doxx family
SFV_RS17385	COG0435	Glutathione S-transferase
SFV_RS17390	COG3152	Membrane
SFV_RS17395	COG0583	DNA-binding transcription factor activity
SFV_RS17400	COG1741	Belongs to the pirin family
SFV_RS17415	COG0814	amino acid
SFV_RS17420	COG1760	l-serine dehydratase
SFV_RS17425	COG0251	oxidation-reduction process
SFV_RS17430	COG1882	Formate acetyltransferase
SFV_RS17435	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
SFV_RS17445	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
SFV_RS17450	COG0583	DNA-binding transcription factor activity
SFV_RS17470	COG1929	Belongs to the glycerate kinase type-1 family
SFV_RS17475	COG2084	Dehydrogenase
SFV_RS17490	COG2271	Major facilitator Superfamily
SFV_RS17505	COG3539	Fimbrial protein
SFV_RS17510	COG3121	Chaperone
SFV_RS17535	COG3188	usher protein
SFV_RS17540	COG3539	Fimbrial protein
SFV_RS17545	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
SFV_RS17565	COG2823	Periplasmic or secreted lipoprotein
SFV_RS17570	COG0701	Predicted permease
SFV_RS17575	COG0702	epimerase
SFV_RS17580	COG0693	protein deglycase activity
SFV_RS17595	COG3153	acetyltransferase
SFV_RS17600	COG3154	lipid carrier protein
SFV_RS17605	COG0826	peptidase U32
SFV_RS17610	COG0826	peptidase U32
SFV_RS17615	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SFV_RS17620	COG0814	amino acid
SFV_RS17630	COG0513	Belongs to the DEAD box helicase family
SFV_RS17665	COG0195	Participates in both transcription termination and antitermination
SFV_RS17695	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
SFV_RS17705	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
SFV_RS17710	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SFV_RS17720	COG1534	Rna-binding protein
SFV_RS17725	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
SFV_RS17730	COG2027	D-alanyl-D-alanine carboxypeptidase
SFV_RS17740	COG0697	spore germination
SFV_RS17755	COG0142	geranyltranstransferase activity
SFV_RS17760	COG3423	Transcriptional regulator
SFV_RS17770	COG5007	Belongs to the BolA IbaG family
SFV_RS17775	COG3113	response to antibiotic
SFV_RS17780	COG2854	intermembrane phospholipid transfer
SFV_RS17785	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
SFV_RS17790	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
SFV_RS17795	COG1127	ABC transporter
SFV_RS17800	COG0530	calcium, potassium:sodium antiporter activity
SFV_RS17810	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
SFV_RS17815	COG3117	lipopolysaccharide transmembrane transporter activity
SFV_RS17820	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
SFV_RS17825	COG1137	ATPase activity
SFV_RS17830	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
SFV_RS17835	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
SFV_RS17850	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
SFV_RS17855	COG0515	serine threonine protein kinase
SFV_RS17865	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
SFV_RS17870	COG5002	protein histidine kinase activity
SFV_RS17870	COG0784	Response regulator, receiver
SFV_RS17870	COG2198	Histidine kinase
SFV_RS17875	COG1242	4 iron, 4 sulfur cluster binding
SFV_RS17880	COG0067	glutamate synthase
SFV_RS17880	COG0069	glutamate synthase activity
SFV_RS17880	COG0070	glutamate synthase
SFV_RS17885	COG0493	'glutamate synthase
SFV_RS17890	COG4804	nuclease activity
SFV_RS17910	COG2731	YhcH YjgK YiaL family protein
SFV_RS17945	COG3069	C4-dicarboxylate transmembrane transporter activity
SFV_RS17950	COG2969	positive regulation of protein catabolic process
SFV_RS17955	COG0625	glutathione transferase activity
SFV_RS17970	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
SFV_RS17975	COG3105	Protein conserved in bacteria
SFV_RS17980	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SFV_RS17985	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SFV_RS18005	COG2732	(Barnase) inhibitor
SFV_RS18025	COG0583	DNA-binding transcription factor activity
SFV_RS18030	COG0312	modulator of DNA gyrase
SFV_RS18035	COG3164	Protein of unknown function
SFV_RS18040	COG1530	ribonuclease E activity
SFV_RS18050	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
SFV_RS18055	COG1792	Involved in formation and maintenance of cell shape
SFV_RS18060	COG1077	Cell shape determining protein MreB Mrl
SFV_RS18070	COG2199	diguanylate cyclase activity
SFV_RS18070	COG2200	EAL domain
SFV_RS18075	COG0604	alcohol dehydrogenase
SFV_RS18095	COG0511	ligase activity, forming carbon-carbon bonds
SFV_RS18100	COG0439	Biotin carboxylase
SFV_RS18105	COG3924	membrane
SFV_RS18110	COG4145	pantothenate transmembrane transporter activity
SFV_RS18130	COG2189	Belongs to the N(4) N(6)-methyltransferase family
SFV_RS18150	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SFV_RS18160	COG0765	amino acid transport
SFV_RS18165	COG1126	abc transporter atp-binding protein
SFV_RS18200	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
SFV_RS18220	COG0551	DNA topoisomerase type I activity
SFV_RS18230	COG0758	DNA mediated transformation
SFV_RS18250	COG0569	domain protein
SFV_RS18260	COG3436	PFAM IS66 Orf2 family protein
SFV_RS18265	COG4372	Transposase
SFV_RS18305	COG0201	protein transport
SFV_RS18395	COG0089	rRNA binding
SFV_RS18470	COG2964	Protein conserved in bacteria
SFV_RS18475	COG0545	Peptidyl-prolyl cis-trans isomerase
SFV_RS18485	COG1047	Peptidyl-prolyl cis-trans
SFV_RS18490	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
SFV_RS18505	COG0488	(ABC) transporter
SFV_RS18510	COG0429	hydrolase of the alpha beta-hydrolase fold
SFV_RS18520	COG3954	Phosphoribulokinase
SFV_RS18525	COG1765	OsmC-like protein
SFV_RS18535	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
SFV_RS18540	COG1289	transmembrane transporter activity
SFV_RS18550	COG0512	Glutamine amidotransferase of anthranilate synthase
SFV_RS18555	COG2184	nucleotidyltransferase activity
SFV_RS18565	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
SFV_RS18575	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
SFV_RS18580	COG2146	nitrite reductase [NAD(P)H] activity
SFV_RS18585	COG2116	formate transmembrane transporter activity
SFV_RS18605	COG2222	sugar isomerase
SFV_RS18610	COG1082	Xylose isomerase domain protein TIM barrel
SFV_RS18620	COG2188	Transcriptional regulator
SFV_RS18625	COG0626	cystathionine gamma-synthase activity
SFV_RS18640	COG1735	metal-dependent hydrolase with the TIM-barrel fold
SFV_RS18645	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
SFV_RS18650	COG3457	Alanine racemase
SFV_RS18660	COG2188	Transcriptional regulator
SFV_RS18675	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
SFV_RS18680	COG0338	D12 class N6 adenine-specific DNA methyltransferase
SFV_RS18685	COG3266	domain, Protein
SFV_RS18700	COG4796	Type ii and iii secretion system protein
SFV_RS18715	COG3166	PFAM Fimbrial assembly family protein
SFV_RS18720	COG4972	Pilus assembly protein
SFV_RS18725	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
SFV_RS18730	COG0494	nUDIX hydrolase
SFV_RS18740	COG1011	Hydrolase
SFV_RS18745	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
SFV_RS18755	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
SFV_RS18780	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
SFV_RS18785	COG2183	response to ionizing radiation
SFV_RS18790	COG1918	ferrous iron import across plasma membrane
SFV_RS18805	COG5464	transposase or invertase
SFV_RS18845	COG2610	gluconate transmembrane transporter activity
SFV_RS18850	COG1640	4-alpha-glucanotransferase
SFV_RS18855	COG0058	SHG alpha-glucan phosphorylase activity
SFV_RS18870	COG1690	Belongs to the RtcB family
SFV_RS18875	COG4650	regulator
SFV_RS18880	COG1349	DNA-binding transcription factor activity
SFV_RS18895	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
SFV_RS18900	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
SFV_RS18910	COG0058	SHG alpha-glucan phosphorylase activity
SFV_RS18935	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SFV_RS18940	COG2095	MarC family integral membrane protein
SFV_RS18950	COG3265	gluconokinase activity
SFV_RS18955	COG1609	Transcriptional regulator
SFV_RS18960	COG1741	Belongs to the pirin family
SFV_RS18965	COG0673	inositol 2-dehydrogenase activity
SFV_RS18970	COG1247	-acetyltransferase
SFV_RS18975	COG0405	Gamma-glutamyltransferase
SFV_RS18985	COG0584	glycerophosphoryl diester phosphodiesterase
SFV_RS19015	COG0410	ABC transporter
SFV_RS19020	COG0411	ABC transporter
SFV_RS19025	COG4177	L-phenylalanine transmembrane transporter activity
SFV_RS19030	COG0559	Belongs to the binding-protein-dependent transport system permease family
SFV_RS19035	COG0683	leucine binding
SFV_RS19040	COG0456	acetyltransferase
SFV_RS19050	COG0683	leucine binding
SFV_RS19055	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
SFV_RS19060	COG2177	Part of the ABC transporter FtsEX involved in
SFV_RS19065	COG2884	Cell division ATP-binding protein ftsE
SFV_RS19075	COG0742	ribosomal rna small subunit methyltransferase
SFV_RS19080	COG3776	membrane
SFV_RS19090	COG3714	YhhN family
SFV_RS19105	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
SFV_RS19120	COG0628	permease
SFV_RS19125	COG2091	lysine biosynthetic process via aminoadipic acid
SFV_RS19130	COG0747	negative chemotaxis
SFV_RS19135	COG0601	transmembrane transport
SFV_RS19140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SFV_RS19170	COG0842	Transport permease protein
SFV_RS19175	COG1129	ABC transporter
SFV_RS19175	COG0842	Transport permease protein
SFV_RS19180	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SFV_RS19280	COG2081	HI0933 family
SFV_RS19285	COG0306	phosphate transporter
SFV_RS19295	COG0589	response to stress
SFV_RS19310	COG0339	signal peptide processing
SFV_RS19315	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
SFV_RS19320	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SFV_RS19335	COG0640	Transcriptional regulator
SFV_RS19340	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
SFV_RS19345	COG1393	Belongs to the ArsC family
SFV_RS19375	COG3065	identical protein binding
SFV_RS19400	COG3247	response to pH
SFV_RS19405	COG2771	luxR family
SFV_RS19415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SFV_RS19430	COG2963	transposase activity
SFV_RS19435	COG2801	Transposase and inactivated derivatives
SFV_RS19445	COG1278	Cold shock
SFV_RS19450	COG2944	sequence-specific DNA binding
SFV_RS19465	COG2885	chlorophyll binding
SFV_RS19470	COG0243	molybdopterin cofactor binding
SFV_RS19475	COG0456	acetyltransferase
SFV_RS19480	COG2818	Glycosylase
SFV_RS19485	COG5571	outer membrane autotransporter
SFV_RS19490	COG2223	nitrite transmembrane transporter activity
SFV_RS19495	COG2194	sulfuric ester hydrolase activity
SFV_RS19510	COG0747	negative chemotaxis
SFV_RS19520	COG0601	transmembrane transport
SFV_RS19530	COG0444	Belongs to the ABC transporter superfamily
SFV_RS19535	COG4608	Belongs to the ABC transporter superfamily
SFV_RS19540	COG0814	amino acid
SFV_RS19565	COG2194	sulfuric ester hydrolase activity
SFV_RS19610	COG1215	transferase activity, transferring glycosyl groups
SFV_RS19615	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
SFV_RS19625	COG2199	diguanylate cyclase activity
SFV_RS19625	COG2200	EAL domain
SFV_RS19635	COG0612	Peptidase, M16
SFV_RS19650	COG2200	EAL domain
SFV_RS19655	COG2982	Protein involved in outer membrane biogenesis
SFV_RS19660	COG0477	Major facilitator Superfamily
SFV_RS19665	COG1295	ribonuclease BN
SFV_RS19670	COG0583	DNA-binding transcription factor activity
SFV_RS19675	COG2197	response regulator
SFV_RS19680	COG3385	transposase activity
SFV_RS19720	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
SFV_RS19735	COG3678	ATP-independent chaperone mediated protein folding
SFV_RS19740	COG0745	RESPONSE REGULATOR receiver
SFV_RS19745	COG2205	protein histidine kinase activity
SFV_RS19750	COG2258	MOSC domain
SFV_RS19775	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
SFV_RS19820	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SFV_RS19825	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SFV_RS19825	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SFV_RS19830	COG1363	Peptidase, m42
SFV_RS19835	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SFV_RS19835	COG3711	transcriptional antiterminator
SFV_RS19850	COG3383	formate dehydrogenase (NAD+) activity
SFV_RS19850	COG0243	molybdopterin cofactor binding
SFV_RS19855	COG0243	molybdopterin cofactor binding
SFV_RS19855	COG3383	formate dehydrogenase (NAD+) activity
SFV_RS19860	COG0437	4 iron, 4 sulfur cluster binding
SFV_RS19865	COG2864	formate dehydrogenase
SFV_RS19880	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
SFV_RS19885	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
SFV_RS19920	COG0456	acetyltransferase
SFV_RS19935	COG1011	Hydrolase
SFV_RS19940	COG1349	DNA-binding transcription factor activity
SFV_RS19945	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SFV_RS19950	COG2084	Dehydrogenase
SFV_RS19960	COG2942	2-epimerase
SFV_RS19965	COG2017	converts alpha-aldose to the beta-anomer
SFV_RS19970	COG1501	Belongs to the glycosyl hydrolase 31 family
SFV_RS19975	COG2211	Major facilitator Superfamily
SFV_RS19980	COG2211	Major facilitator Superfamily
SFV_RS19985	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
SFV_RS20000	COG2271	Major facilitator Superfamily
SFV_RS20005	COG1082	Xylose isomerase domain protein TIM barrel
SFV_RS20010	COG2188	Transcriptional regulator
SFV_RS20015	COG3385	transposase activity
SFV_RS20020	COG1217	gtp-binding protein TYPA
SFV_RS20030	COG0174	glutamine synthetase
SFV_RS20035	COG3852	Histidine kinase
SFV_RS20040	COG2204	response regulator
SFV_RS20050	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SFV_RS20065	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SFV_RS20065	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SFV_RS20075	COG0204	Acyl-transferase
SFV_RS20095	COG5339	Protein conserved in bacteria
SFV_RS20100	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
SFV_RS20110	COG3084	Protein conserved in bacteria
SFV_RS20115	COG0746	molybdenum cofactor guanylyltransferase activity
SFV_RS20120	COG1763	Mo-molybdopterin cofactor biosynthetic process
SFV_RS20145	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
SFV_RS20150	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SFV_RS20155	COG1739	Uncharacterized protein family UPF0029
SFV_RS20175	COG0543	2 iron, 2 sulfur cluster binding
SFV_RS20185	COG0250	Participates in transcription elongation, termination and antitermination
SFV_RS20195	COG0805	protein transport
SFV_RS20200	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SFV_RS20205	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SFV_RS20215	COG3165	ubiquinone biosynthetic process from chorismate
SFV_RS20225	COG1322	Protein conserved in bacteria
SFV_RS20230	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
SFV_RS20235	COG0412	Dienelactone hydrolase
SFV_RS20245	COG0583	DNA-binding transcription factor activity
SFV_RS20250	COG0697	spore germination
SFV_RS20255	COG0561	phosphatase activity
SFV_RS20260	COG2267	carboxylic ester hydrolase activity
SFV_RS20265	COG1280	lysine exporter protein (LysE YggA)
SFV_RS20270	COG1280	lysine exporter protein (LysE YggA)
SFV_RS20275	COG0514	ATP-dependent DNA helicase (RecQ)
SFV_RS20280	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
SFV_RS20285	COG2050	protein possibly involved in aromatic compounds catabolism
SFV_RS20290	COG2962	Rard protein
SFV_RS20305	COG0598	Magnesium transport protein CorA
SFV_RS20315	COG3698	Phosphodiester glycosidase
SFV_RS20320	COG3385	transposase activity
SFV_RS20330	COG0210	DNA helicase
SFV_RS20335	COG1011	Hydrolase
SFV_RS20345	COG3159	Protein conserved in bacteria
SFV_RS20355	COG5567	small periplasmic lipoprotein
SFV_RS20375	COG3072	Adenylate cyclase
SFV_RS20385	COG1587	Uroporphyrinogen-III synthase
SFV_RS20390	COG2959	enzyme of heme biosynthesis
SFV_RS20395	COG3071	HemY protein
SFV_RS20420	COG0641	radical SAM
SFV_RS20445	COG1113	amino acid transport
SFV_RS20465	COG2244	polysaccharide biosynthetic process
SFV_RS20470	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
SFV_RS20475	COG0456	acetyltransferase
SFV_RS20480	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
SFV_RS20485	COG1088	dTDP-glucose 4,6-dehydratase activity
SFV_RS20490	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
SFV_RS20495	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
SFV_RS20500	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
SFV_RS20505	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SFV_RS20515	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
SFV_RS20525	COG3118	belongs to the thioredoxin family
SFV_RS20540	COG0210	DNA helicase
SFV_RS20545	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
SFV_RS20555	COG0583	DNA-binding transcription factor activity
SFV_RS20560	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
SFV_RS20570	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
SFV_RS20575	COG3978	acetolactate synthase activity
SFV_RS20590	COG0606	chelatase, subunit chli
SFV_RS20595	COG3085	chromosome segregation
SFV_RS20635	COG2186	Transcriptional regulator
SFV_RS20640	COG0477	Major facilitator Superfamily
SFV_RS20645	COG1609	Transcriptional regulator
SFV_RS20650	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SFV_RS20660	COG1172	Belongs to the binding-protein-dependent transport system permease family
SFV_RS20680	COG1129	ABC transporter
SFV_RS20695	COG3385	transposase activity
SFV_RS20750	COG3312	ion transport
SFV_RS20765	COG0716	FMN binding
SFV_RS20770	COG1522	sequence-specific DNA binding
SFV_RS20790	COG3385	transposase activity
SFV_RS20815	COG3188	usher protein
SFV_RS20825	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
SFV_RS20830	COG0573	inorganic phosphate transmembrane transporter activity
SFV_RS20835	COG0581	inorganic phosphate transmembrane transporter activity
SFV_RS20840	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
SFV_RS20845	COG0704	Plays a role in the regulation of phosphate uptake
SFV_RS20850	COG3711	transcriptional antiterminator
SFV_RS20855	COG2190	(PTS) system
SFV_RS20855	COG1263	PTS System
SFV_RS20855	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SFV_RS20860	COG2723	6-phospho-beta-galactosidase activity
SFV_RS20870	COG2382	esterase
SFV_RS20875	COG0363	glucosamine-6-phosphate deaminase activity
SFV_RS20890	COG3436	PFAM IS66 Orf2 family protein
SFV_RS20905	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SFV_RS20910	COG2252	PERMEase
SFV_RS20915	COG0431	NADPH-dependent FMN reductase
SFV_RS20920	COG2091	lysine biosynthetic process via aminoadipic acid
SFV_RS20950	COG0814	amino acid
SFV_RS20995	COG0592	DNA-directed DNA polymerase activity
SFV_RS21005	COG0187	DNA topoisomerase II activity
SFV_RS21015	COG3753	Protein conserved in bacteria
SFV_RS21020	COG0561	phosphatase activity
SFV_RS21030	COG2186	Transcriptional regulator
SFV_RS21035	COG3734	2-keto-3-deoxy-galactonokinase
SFV_RS21040	COG0800	Aldolase
SFV_RS21055	COG2271	Major facilitator Superfamily
SFV_RS21065	COG0823	Involved in the tonB-independent uptake of proteins
SFV_RS21070	COG5645	(Lipo)protein
SFV_RS21095	COG2188	Transcriptional regulator
SFV_RS21110	COG2207	Transcriptional regulator
SFV_RS21115	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
SFV_RS21120	COG3119	arylsulfatase activity
SFV_RS21130	COG2149	membrane
SFV_RS21140	COG0641	radical SAM
SFV_RS21145	COG2814	Major facilitator Superfamily
SFV_RS21170	COG0028	Belongs to the TPP enzyme family
SFV_RS21175	COG0440	acetolactate synthase activity
SFV_RS21180	COG2197	response regulator
SFV_RS21185	COG3851	Histidine kinase
SFV_RS21190	COG2271	Major facilitator Superfamily
SFV_RS21195	COG2271	Major facilitator Superfamily
SFV_RS21205	COG2252	PERMEase
SFV_RS21285	COG2801	Transposase and inactivated derivatives
SFV_RS21370	COG0582	viral genome integration into host DNA
SFV_RS21385	COG1501	Belongs to the glycosyl hydrolase 31 family
SFV_RS21390	COG2982	Protein involved in outer membrane biogenesis
SFV_RS21395	COG2233	PERMEase
SFV_RS21400	COG0786	glutamate:sodium symporter activity
SFV_RS21405	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
SFV_RS21410	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SFV_RS21415	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
SFV_RS21425	COG0194	GDP metabolic process
SFV_RS21435	COG2860	membrane
SFV_RS21440	COG3645	SOS response
SFV_RS21445	COG1561	YicC-like family, N-terminal region
SFV_RS21470	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SFV_RS21500	COG1519	Transferase
SFV_RS21515	COG0859	PFAM glycosyl transferase family 9
SFV_RS21520	COG0438	transferase activity, transferring glycosyl groups
SFV_RS21525	COG0515	serine threonine protein kinase
SFV_RS21535	COG3642	lipopolysaccharide core region biosynthetic process
SFV_RS21555	COG0859	PFAM glycosyl transferase family 9
SFV_RS21560	COG0859	PFAM glycosyl transferase family 9
SFV_RS21575	COG0156	8-amino-7-oxononanoate synthase activity
SFV_RS21585	COG1216	Glycosyl transferase, family 2
SFV_RS21595	COG1216	Glycosyl transferase, family 2
SFV_RS21600	COG2861	carbohydrate metabolic process
SFV_RS21605	COG4942	peptidase
SFV_RS21625	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SFV_RS21630	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SFV_RS21645	COG1045	serine acetyltransferase
SFV_RS21650	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
SFV_RS21660	COG2186	Transcriptional regulator
SFV_RS21665	COG1620	l-lactate permease
SFV_RS21700	COG3722	fumarate hydratase activity
SFV_RS21710	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
SFV_RS21710	COG2213	PTS system mannitol-specific
SFV_RS21720	COG1566	PFAM secretion protein HlyD family protein
SFV_RS21725	COG0625	glutathione transferase activity
SFV_RS21735	COG3276	selenocysteine insertion sequence binding
SFV_RS21740	COG1454	alcohol dehydrogenase
SFV_RS21745	COG1012	belongs to the aldehyde dehydrogenase family
SFV_RS21760	COG1566	PFAM secretion protein HlyD family protein
SFV_RS21780	COG3713	MltA-interacting MipA family protein
SFV_RS21790	COG2211	Major facilitator Superfamily
SFV_RS21800	COG0235	Class ii aldolase
SFV_RS21805	COG3623	hexulose-6-phosphate isomerase
SFV_RS21810	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
SFV_RS21815	COG1070	Carbohydrate kinase
SFV_RS21820	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
SFV_RS21825	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
SFV_RS21830	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
SFV_RS21845	COG2731	YhcH YjgK YiaL family protein
SFV_RS21855	COG1414	Transcriptional regulator
SFV_RS21860	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SFV_RS21870	COG3977	Valine--pyruvate aminotransferase
SFV_RS21875	COG0366	Alpha amylase catalytic
SFV_RS21880	COG2992	FlgJ-related protein
SFV_RS21900	COG4213	ABC transporter substrate-binding protein
SFV_RS21910	COG1070	Carbohydrate kinase
SFV_RS21915	COG4682	membrane
SFV_RS21920	COG4682	membrane
SFV_RS21925	COG3274	enterobacterial common antigen metabolic process
SFV_RS21955	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
SFV_RS21960	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SFV_RS21965	COG2207	Transcriptional regulator
SFV_RS21980	COG1858	cytochrome C peroxidase
SFV_RS21990	COG3691	Protein conserved in bacteria
SFV_RS21995	COG0589	response to stress
SFV_RS22005	COG1494	fructose-1,6-bisphosphatase
SFV_RS22030	COG1575	Belongs to the MenA family. Type 1 subfamily
SFV_RS22045	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
SFV_RS22050	COG1609	Transcriptional regulator
SFV_RS22055	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SFV_RS22065	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
SFV_RS22075	COG0626	cystathionine gamma-synthase activity
SFV_RS22080	COG0460	homoserine dehydrogenase
SFV_RS22080	COG0527	aspartate kinase activity
SFV_RS22090	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
SFV_RS22100	COG0697	spore germination
SFV_RS22105	COG3738	Protein conserved in bacteria
SFV_RS22120	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SFV_RS22125	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SFV_RS22135	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SFV_RS22140	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SFV_RS22145	COG1882	Formate acetyltransferase
SFV_RS22150	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SFV_RS22155	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SFV_RS22160	COG2207	Transcriptional regulator
SFV_RS22165	COG2194	sulfuric ester hydrolase activity
SFV_RS22195	COG3385	transposase activity
SFV_RS22200	COG4948	Mandelate Racemase Muconate Lactonizing
SFV_RS22205	COG2271	Major facilitator Superfamily
SFV_RS22215	COG2271	Major facilitator Superfamily
SFV_RS22220	COG0583	DNA-binding transcription factor activity
SFV_RS22250	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
SFV_RS22280	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
SFV_RS22280	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
SFV_RS22320	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
SFV_RS22325	COG0250	Participates in transcription elongation, termination and antitermination
SFV_RS22360	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
SFV_RS22370	COG2104	thiamine diphosphate biosynthetic process
SFV_RS22375	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
SFV_RS22410	COG3068	Protein conserved in bacteria
SFV_RS22425	COG3678	ATP-independent chaperone mediated protein folding
SFV_RS22430	COG4191	Histidine kinase
SFV_RS22435	COG2204	response regulator
SFV_RS22440	COG0151	Belongs to the GarS family
SFV_RS22470	COG0456	acetyltransferase
SFV_RS22485	COG2224	Isocitrate lyase
SFV_RS22500	COG1414	Transcriptional regulator
SFV_RS22505	COG1410	methionine synthase
SFV_RS22505	COG0646	methionine synthase
SFV_RS22510	COG1283	sodium-dependent phosphate transmembrane transporter activity
SFV_RS22595	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
SFV_RS22600	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
SFV_RS22600	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
SFV_RS22605	COG3647	Membrane
SFV_RS22610	COG2211	Major facilitator Superfamily
SFV_RS22615	COG1486	melibiose metabolic process
SFV_RS22625	COG2169	Transcriptional regulator
SFV_RS22630	COG1982	Orn Lys Arg decarboxylase major
SFV_RS22635	COG2207	Transcriptional regulator
SFV_RS22640	COG0531	amino acid
SFV_RS22645	COG2194	sulfuric ester hydrolase activity
SFV_RS22650	COG0745	RESPONSE REGULATOR receiver
SFV_RS22655	COG0642	Histidine kinase
SFV_RS22665	COG0477	Major facilitator Superfamily
SFV_RS22675	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
SFV_RS22680	COG2824	Alkylphosphonate utilization operon protein PhnA
SFV_RS22685	COG2764	glyoxalase bleomycin resistance protein dioxygenase
SFV_RS22695	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
SFV_RS22735	COG3383	formate dehydrogenase (NAD+) activity
SFV_RS22740	COG3383	formate dehydrogenase (NAD+) activity
SFV_RS22745	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
SFV_RS22750	COG1301	dicarboxylic acid transport
SFV_RS22755	COG4235	cytochrome complex assembly
SFV_RS22760	COG3088	subunit of a heme lyase
SFV_RS22765	COG1138	Cytochrome C-type biogenesis protein
SFV_RS22770	COG3301	Polysulphide reductase, NrfD
SFV_RS22775	COG0437	4 iron, 4 sulfur cluster binding
SFV_RS22780	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
SFV_RS22795	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SFV_RS22800	COG3162	membrane
SFV_RS22820	COG0025	NhaP-type Na H and K H
SFV_RS22825	COG2252	PERMEase
SFV_RS22830	COG0789	Transcriptional regulator
SFV_RS22835	COG2207	Transcriptional regulator
SFV_RS22840	COG4943	cyclic-guanylate-specific phosphodiesterase activity
SFV_RS22860	COG0629	single-stranded DNA binding
SFV_RS22865	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
SFV_RS22870	COG2315	Protein conserved in bacteria
SFV_RS22875	COG0432	Pfam Uncharacterised protein family UPF0047
SFV_RS22880	COG3700	Belongs to the class B bacterial acid phosphatase family
SFV_RS22890	COG1448	Aminotransferase
SFV_RS22895	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
SFV_RS22900	COG0305	Participates in initiation and elongation during chromosome replication
SFV_RS22905	COG0604	alcohol dehydrogenase
SFV_RS22930	COG0735	belongs to the Fur family
SFV_RS22935	COG3237	CsbD-like
SFV_RS22940	COG0534	Mate efflux family protein
SFV_RS22950	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
SFV_RS22995	COG2182	Extracellular solute-binding protein
SFV_RS23000	COG1175	transmembrane transport
SFV_RS23005	COG3833	ABC-type maltose transport systems, permease component
SFV_RS23035	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
SFV_RS23060	COG0527	aspartate kinase activity
SFV_RS23065	COG4372	Transposase
SFV_RS23070	COG3436	PFAM IS66 Orf2 family protein
SFV_RS23095	COG3366	ferrous iron transmembrane transporter activity
SFV_RS23100	COG0700	Nucleoside recognition
SFV_RS23105	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
SFV_RS23110	COG0583	DNA-binding transcription factor activity
SFV_RS23130	COG2186	Transcriptional regulator
SFV_RS23140	COG0246	Mannitol dehydrogenase
SFV_RS23155	COG2610	gluconate transmembrane transporter activity
SFV_RS23160	COG3539	Fimbrial protein
SFV_RS23165	COG3539	Fimbrial protein
SFV_RS23170	COG3539	Fimbrial protein
SFV_RS23175	COG3188	usher protein
SFV_RS23180	COG3121	Chaperone
SFV_RS23185	COG3539	Fimbrial protein
SFV_RS23205	COG4974	Belongs to the 'phage' integrase family
SFV_RS23210	COG0582	viral genome integration into host DNA
SFV_RS23225	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
SFV_RS23250	COG0440	acetolactate synthase activity
SFV_RS23255	COG0440	acetolactate synthase activity
SFV_RS23260	COG2963	transposase activity
SFV_RS23280	COG0582	viral genome integration into host DNA
SFV_RS23290	COG1064	alcohol dehydrogenase
SFV_RS23295	COG0433	COG0433 Predicted ATPase
SFV_RS23300	COG0795	lipopolysaccharide-transporting ATPase activity
SFV_RS23305	COG0795	lipopolysaccharide-transporting ATPase activity
SFV_RS23315	COG2927	DNA polymerase III (CHI subunit)
SFV_RS23325	COG4269	membrane
SFV_RS23330	COG0456	acetyltransferase
SFV_RS23335	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
SFV_RS23360	COG2731	YhcH YjgK YiaL family protein
SFV_RS23365	COG1309	transcriptional regulator
SFV_RS23370	COG1028	Short-chain dehydrogenase reductase Sdr
SFV_RS23375	COG0251	oxidation-reduction process
SFV_RS23400	COG0251	oxidation-reduction process
SFV_RS23405	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
SFV_RS23410	COG1609	Transcriptional regulator
SFV_RS23415	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SFV_RS23415	COG1263	PTS System
SFV_RS23420	COG0366	Alpha amylase catalytic
SFV_RS23425	COG1328	CTP reductase activity
SFV_RS23430	COG0602	queuosine metabolic process
SFV_RS23435	COG3783	Cytochrome b(562)
SFV_RS23440	COG0312	modulator of DNA gyrase
SFV_RS23450	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
SFV_RS23460	COG3385	transposase activity
SFV_RS23465	COG1172	Belongs to the binding-protein-dependent transport system permease family
SFV_RS23470	COG1172	Belongs to the binding-protein-dependent transport system permease family
SFV_RS23475	COG1129	ABC transporter
SFV_RS23485	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
SFV_RS23490	COG2105	PFAM AIG2 family protein
SFV_RS23495	COG2911	Protein conserved in bacteria
SFV_RS23500	COG0729	surface antigen
SFV_RS23515	COG1253	flavin adenine dinucleotide binding
SFV_RS23525	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
SFV_RS23540	COG0737	Belongs to the 5'-nucleotidase family
SFV_RS23545	COG1733	regulation of RNA biosynthetic process
SFV_RS23550	COG0702	epimerase
SFV_RS23555	COG0697	spore germination
SFV_RS23565	COG1113	amino acid transport
SFV_RS23570	COG0545	Peptidyl-prolyl cis-trans isomerase
SFV_RS23575	COG3061	Opacity-associated protein A
SFV_RS23580	COG1309	transcriptional regulator
SFV_RS23610	COG0531	amino acid
SFV_RS23635	COG1309	transcriptional regulator
SFV_RS23650	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
SFV_RS23655	COG1027	Aspartate ammonia-lyase
SFV_RS23660	COG3030	protein affecting phage T7 exclusion by the F plasmid
SFV_RS23665	COG0531	amino acid
SFV_RS23700	COG1509	lysine 2,3-aminomutase activity
SFV_RS23710	COG5510	response to toxic substance
SFV_RS23715	COG5510	response to toxic substance
SFV_RS23720	COG2076	Multidrug Resistance protein
SFV_RS23725	COG3040	lipid binding
SFV_RS23730	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SFV_RS23745	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
SFV_RS23750	COG1053	succinate dehydrogenase
SFV_RS23765	COG1511	domain protein
SFV_RS23765	COG3264	Mechanosensitive ion channel
SFV_RS23805	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
SFV_RS23810	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
SFV_RS23810	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
SFV_RS23815	COG0802	atpase or kinase
SFV_RS23820	COG0860	N-Acetylmuramoyl-L-alanine amidase
SFV_RS23840	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
SFV_RS23845	COG0330	HflC and HflK could
SFV_RS23850	COG0330	HflC and HflK could
SFV_RS23855	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
SFV_RS23870	COG0557	exoribonuclease II activity
SFV_RS23875	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SFV_RS23890	COG3766	membrane
SFV_RS23895	COG5463	Belongs to the UPF0441 family
SFV_RS23905	COG1960	acyl-CoA dehydrogenase activity
SFV_RS23915	COG3650	response to hydrogen peroxide
SFV_RS23920	COG1073	alpha beta
SFV_RS23985	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
SFV_RS24000	COG2963	transposase activity
SFV_RS24005	COG2801	Transposase and inactivated derivatives
SFV_RS24030	COG0732	type I restriction modification DNA specificity domain
SFV_RS24055	COG0523	cobalamin synthesis protein
SFV_RS24060	COG2879	small protein
SFV_RS24065	COG1966	Carbon starvation protein
SFV_RS24075	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
SFV_RS24085	COG1234	tRNA 3'-trailer cleavage
SFV_RS24105	COG3971	2-oxopent-4-enoate hydratase activity
SFV_RS24115	COG3384	dioxygenase
SFV_RS24120	COG1012	belongs to the aldehyde dehydrogenase family
SFV_RS24125	COG0179	Fumarylacetoacetate (FAA) hydrolase
SFV_RS24130	COG1846	Transcriptional regulator
SFV_RS24135	COG0840	transmembrane signaling receptor activity
SFV_RS24140	COG2271	Major facilitator Superfamily
SFV_RS24165	COG1484	DNA-dependent DNA replication
SFV_RS24180	COG2966	Psort location CytoplasmicMembrane, score
SFV_RS24190	COG2197	response regulator
SFV_RS24195	COG2197	response regulator
SFV_RS24200	COG4114	ferric iron reductase
SFV_RS24230	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
SFV_RS24235	COG0456	acetyltransferase
SFV_RS24240	COG1011	Hydrolase
SFV_RS24250	COG2823	Periplasmic or secreted lipoprotein
SFV_RS24260	COG4667	esterase of the alpha-beta hydrolase superfamily
SFV_RS24265	COG0084	hydrolase, TatD family'
SFV_RS24270	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
SFV_RS24275	COG1328	CTP reductase activity
SFV_RS24320	COG3726	membrane protein affecting hemolysin expression
SFV_RS24325	COG0560	Phosphoserine phosphatase
SFV_RS24330	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
SFV_RS24335	COG3172	ATPase kinase involved in NAD metabolism
SFV_RS24335	COG1056	cytidyltransferase-related domain
SFV_RS24345	COG0488	(ABC) transporter
SFV_RS24350	COG0741	lytic transglycosylase activity
SFV_RS24370	COG2207	Transcriptional regulator
SFV_RS24370	COG3708	Transcriptional regulator
SFV_RS24375	COG3045	CreA protein
SFV_RS24380	COG0745	RESPONSE REGULATOR receiver
SFV_RS24385	COG2205	protein histidine kinase activity
SFV_RS24390	COG4452	Inner membrane protein CreD
SFV_RS24395	COG0745	RESPONSE REGULATOR receiver
SFV_RS24405	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
SFV_RS24440	COG2801	Transposase and inactivated derivatives
SFV_RS24470	COG3119	arylsulfatase activity
SFV_RS24485	COG0243	molybdopterin cofactor binding
SFV_RS24525	COG3646	Phage regulatory protein
SFV_RS24530	COG3196	Protein conserved in bacteria