SFV_RS00015 NONE SFV_RS00020 5043 .. 5069 + -5 -5.24129 CATTATCTCAATCAG GCCGGGTTTTCT TTT ATGCAGCCCGGC TTTTTTATGAAGAAA 82 49 SFV_RS00025 NONE SFV_RS00030 5563 .. 5596 + -11.7 -2.62043 CAATCCGGCATTCAG CGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC TACGTTAATTCTGCA 79 59 SFV_RS00045 9263 .. 9292 + -12.9 -2.5294 CTGCTGTAATCATTC TTAGCGTGACCGG GAAG TCGGTCACGCTAC CTCTTCTGAAGCCTG 84 32 mogA NONE dnaK 14170 .. 14207 + -17.1 -3.25823 AACGGGTAATTATAC TGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CA TTCATCTAGGGGCAA 100 51 SFV_RS00075 15439 .. 15460 + -13.7 -3.39449 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA 100 101 nhaA 17388 .. 17407 + -10.7 -4.59414 CAGGACGGTTTACCG GGGAGCC ATAAAC GGCTCCC TTTTCATTGTTATCA 95 41 nhaR 18344 .. 18370 + -5.1 -2.62043 GTGCGTTAATCGGCA GCTCCCCCA AAGTTAAGG TGGGGGAGA TAGATTAGTTGTACA 48 32 SFV_RS00115 NONE SFV_RS00120 21361 .. 21374 + -3.7 -3.54475 TTTGGGCTAACAAAA CCGGC TTAA GCCTG TTATGTAATCAAACC 52 17 ileS NONE lspA NONE SFV_RS00135 NONE ispH 26239 .. 26258 + -9.3 -5.24129 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGAAGAAA 100 54 SFV_RS00145 27207 .. 27234 + -6.4 -3.70149 CTGTCACATGTTATC GGCATGCAGTC ATTCATC GACT-CATGCC TTTCACTGATATCCC 62 42 SFV_RS00150 28234 .. 28252 + -3.1 -5.32396 TTTATTAATTATAAA GGGCT TTAATTTTT AGCCC TTTTATTTTTGGTGT 81 81 SFV_RS00165 NONE carB 33075 .. 33094 + -10 -6.07627 ATCGAATAACTAATA CGGTTCTC TGAT GAGGACCG TTTTTTTTTGCCCAT 100 79 SFV_RS00180 33787 .. 33809 + -8.4 -4.33165 TAGGCGTCACATCCG TCGTCCCC TGCAAAC GGGGGCGA TTTTCCTCCATTTGC 84 134 SFV_RS00215 NONE SFV_RS00220 43093 .. 43107 + -3.5 -3.17763 CCTTCCGGCACTGAC CGCAGC TTTA GC-GCG TTGATCCACTCTGGC 46 7 SFV_RS00225 NONE SFV_RS00230 44719 .. 44729 + -2.4 -2.83798 CCTTTGGTGTGGAGT TCCG TTA CGGC TGATGTTGGTTTGAT 40 12 SFV_RS00235 NONE SFV_RS00240 NONE SFV_RS00245 NONE SFV_RS00250 NONE folA 49313 .. 49345 + -15.6 -2.58999 GAATTTACGGCTAGT GCCGGATGCGACGC CGGTC GCGTCTTATCCGGC CTTCCTGTATCAGGC 93 50 djlA 57192 .. 57247 + -11.1 -2.58544 TAGGCCTGATAAGAC GCGGCCCGCGTCGCATCAGGCAATCG GCGCA CAATTGCCGGATGCGGCGTGAAC-GC CTTATCCGCCTACCG 74 52 SFV_RS00325 68825 .. 68837 + -4.8 -3.25088 AGTAGCATAGGGTTT GCAG AATCC CTGC TTCGTCCATTTGACA 52 75 SFV_RS00330 69655 .. 69669 + -7.1 -3.30124 CGGTTTGCCTCATGC GACGC TGACC GCGTC TTATCAGGCCTACAA 63 55 SFV_RS00355 75075 .. 75095 + -9.7 -6.17268 GTGTAAAATCACCCG CCAGCAGAT TAT ACCTGCTGG TTTTTTTTATTCTCG 100 71 SFV_RS00360 76794 .. 76804 + -4.6 -4.72272 ACGAAGTCCGGGTTT GGCT GTT GGCC TTTTTCATCGAGAAA 72 510 leuO 82829 .. 82868 + -19.6 -5.49234 CAAACGCTAACTGAA TGCAGAATAGGCCAGACA TGAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT 100 31 SFV_RS00395 NONE ilvH NONE SFV_RS00405 85489 .. 85511 + -2.8 -4.87318 GTTAATGAATTTAAC CCATA-CCA GTACAA TGGCTATGG TTTTTACATTTTACG 68 57 SFV_RS00410 NONE SFV_RS00415 87839 .. 87849 + -5.4 -4.26903 TATGCCTTGTGACTG GCTT GAC AAGC TTTTCCTCCGCTCCG 67 501 SFV_RS00420 NONE SFV_RS00425 NONE SFV_RS00430 NONE SFV_RS00435 NONE murE NONE murF NONE mraY NONE murD NONE SFV_RS00460 NONE murG 99003 .. 99024 + -3.8 -2.64651 GCCCGGGCGTAATTG TAGCGATGC CTTTT GCATCG-TA TGAATTTAAGAAGTT 44 29 SFV_RS00470 NONE ddl NONE SFV_RS00480 NONE ftsA NONE SFV_RS00490 104794 .. 104815 + -6.7 -3.09208 TGGTAAACTGGCCCG CCGAA-TGTA TAG TACACTTCGG TTGGATAGGTAATTT 58 75 lpxC 105789 .. 105832 + -4.5 -6.17292 CTGTCGTATAAAATT CGACTGGCAAATCTGGC ACTCTCTCCG GCCAGGTGAACCAGTCG TTTTTTTTTGAATTT 100 52 SFV_RS00500 106535 .. 106551 + -2.1 -2.8704 TACTTCATTTTATTA ACTCCGT AAC GCGGGGC GTTTGAGATTTTATT 41 55 secA 109294 .. 109311 + -12.7 -5.33866 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA 100 47 SFV_RS00510 109722 .. 109751 + -12.1 -2.72144 CTTAAGCGTCTGTAG GTCGGATAAGGCG TTCA CGCCGCATCCGAC ATTTGCACAAGATGC 79 26 SFV_RS00535 112668 .. 112693 + -16.2 -3.32963 CCTGTAATCTCCCAA CGCTGGCGTG GAGCAA CACGCCAGCG TTATCCCATCCCACT 100 34 SFV_RS00560 116190 .. 116200 + -3.2 -3.54459 TACCTTACTGGCAAC TCCT GAA AGGG TTTGCACAAAATTAA 49 486 SFV_RS00570 NONE SFV_RS00575 118126 .. 118136 + -2.4 -3.46586 ATTAATGCGCTTTTA CGGC TTT GGCG GTTTTCTCTTTAAAC 47 82 pdhR 120795 .. 120820 + -4.9 -3.24924 GAAAGAATTAGTGAT TTTTCTGG-TAA AAA TTATCCAGAAGA TGTTGTAAATCAAGC 52 30 aceE NONE aceF 125518 .. 125535 + -14.1 -5.32882 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC 100 34 SFV_RS00600 127294 .. 127310 + -6.5 -5.50499 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGC 100 61 SFV_RS00610 132170 .. 132195 + -12.7 -5.72622 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA 100 61 SFV_RS00615 132757 .. 132794 + -3.5 -3.19293 CTCGCGCATTTCTTT CC-ACAGCGCAGCGGTA ATTTCC TGGCGCT-CGCTGTCGG TTAAATCTTCCGGTT 47 111 SFV_RS00635 136575 .. 136594 + -13.6 -3.65135 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC 100 46 SFV_RS00645 139737 .. 139770 + -3.1 -5.4182 CTGGACGAGTAAGTG TGAAGTTGCCGGATGT GTT GCATCCGGCA-TGGCA TTTTTATTTGTGGTT 81 29 SFV_RS00655 NONE SFV_RS00660 142245 .. 142274 + -12.9 -4.10657 CGTAGCTAAGGCTAT TTCCTCTCCTCTG GATT CGGGGGAGAGGAG TTTTGACGGCTATCA 100 32 SFV_RS00665 142800 .. 142821 + -5.2 -3.92542 CCGCGATTCTGATGG CGCTTTTG CTACAA TAAAAGCG TTGTTTCACCCTCGG 61 42 SFV_RS00670 144493 .. 144507 + -11.4 -3.56099 CCTGTCGTTAACGAA GCAGGC GGT GCCTGC TTTGAGGAAATTCTC 85 442 SFV_RS00680 145678 .. 145702 + -7.8 -3.1855 GGGGTAAATTAATAA CTGGCGCCAT CAGCC GTAGCGCCAG TTAAGTATTACGCCA 64 67 SFV_RS00700 148839 .. 148862 + -3.1 -3.99898 TTCTTCATATCGTAG TGCGGAACG GTCAGG CGTTCGGTA TTTATCACTTCATTA 55 306 SFV_RS00735 NONE SFV_RS00740 NONE mrcB 158842 .. 158861 + -9.2 -3.68662 GCTCAGATTGCGTAC CGCTTGCG AACC CGCCAGCG TTTCGAATATTATCT 75 150 SFV_RS00750 161192 .. 161211 + -15 -2.74322 CTAATTTCTCTTTTG GGGCACGG ATTT CCGTGCCC ATTTCACAAGTTGGC 89 37 SFV_RS00755 NONE SFV_RS00760 NONE SFV_RS00765 164901 .. 164927 + -12.2 -2.58579 CAGAGCCGTTAATAG AATGCCTCGCCC GGT GGGCGAGGCAAA ATTATCACAACTTCG 79 29 SFV_RS00775 NONE SFV_RS00780 168294 .. 168322 + -14.7 -3.68024 ATCTAATCTGTTGTT CATGTGCCGGATA AAC TATCCGGCACATC TTCTCTCTTCAACGC 100 35 dgt NONE SFV_RS00805 173649 .. 173672 + -14.6 -3.52093 AGTAATCTCCCTCAA CCCCTTCCTG AATA CGGGAAGGGG TTCTCCTTACAATCT 100 36 SFV_RS00810 175284 .. 175298 + -7.1 -4.40003 AAACTTAACGCTCTT GGCGA AAAAC TCGCC TTTGTCTTTCTGGAA 75 372 SFV_RS00835 181377 .. 181397 + -11.1 -4.89729 GTACACGTTTGGTTA GGGGGCC TGCATAT GGCCCCC TTTTTCACTTTTATA 100 200 tsf 182322 .. 182343 + -13.7 -4.84761 CTTAATTATCAAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT 100 36 SFV_RS00845 183438 .. 183456 + -3.1 -4.11751 ACTGTGTGTGACTGT CTGGTCT GACTG AGACAAG TTTTCAAGGATTCGT 57 280 frr 184045 .. 184093 + -11.8 -5.27206 TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC 100 38 SFV_RS00855 185425 .. 185442 + -8.4 -6.02914 TATAAGGTCAGGTAT GCCGTG GTTTTA CACGGC TTTTTTTTGTATAGG 100 130 SFV_RS00860 NONE cdsA NONE SFV_RS00870 188489 .. 188504 + -5.4 -3.33696 ACTTTTCAATGATTT CTCTCG GTTA TGAGAG TTAGTTAGGAAGAAC 56 13 SFV_RS00875 NONE SFV_RS00880 NONE lpxD 192626 .. 192663 + -12.7 -4.07515 TTGTTCGCCAAACTT TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG TTATTATTGTCGTTT 100 52 SFV_RS00890 193142 .. 193163 + -4.3 -2.79098 ACGATGATGTGTGCT CGTAGCCGG GAGG CCTGATACG TGATTGATAAATCCG 47 8 SFV_RS00895 NONE lpxB NONE rnhB 195678 .. 195689 + -5.8 -3.01243 GTCAAACGCGCACTG GGAC TTGC GTCC TGATTCTTGTGTCGA 52 11 dnaE NONE SFV_RS00915 200204 .. 200221 + -9.1 -5.24129 AAAAGTTCTGAAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG 100 46 SFV_RS00920 NONE SFV_RS00925 202889 .. 202909 + -13.3 -3.24925 TGTCATCGCCGCATT TGCCCGGTA ACG TGCCGGGCA TTGCTACTGTAAAAT 91 45 tilS 204566 .. 204579 + -8.1 -4.65895 ACCAGTAAGTTTGCC GCAGC GTAT GCTGC TTTTTCCCTGACAGC 84 358 SFV_RS00945 NONE SFV_RS00950 NONE SFV_RS00955 206684 .. 206713 + -13.5 -3.21934 AGCACGATTTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTTGTGCACGAGG 93 126 SFV_RS00995 214102 .. 214116 + -6.4 -3.12999 GTTGAAGAGAAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAATAG 56 162 SFV_RS01000 NONE SFV_RS01005 216067 .. 216102 + -7 -4.00532 AGTCACCTGCCTTGA TATCTCAAAACTCATC TTCG GGTGATGTTTGAGATA TTTGCTCTTTAAAAA 68 61 SFV_RS01010 NONE SFV_RS01015 219358 .. 219373 + -6.1 -2.82742 AAATTAAGCAGTAAG CCGGT CATAAA ACCGG TGGTTGTAAAAGAAT 53 44 SFV_RS01020 219552 .. 219562 + -6.8 -3.90048 TCGCAAAAATTCTCT GCGT TTT ACGC TCTTTTTCCGCAACA 68 107 dkgB 220466 .. 220491 + -16.3 -3.90762 TCCTCCGGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG 100 55 SFV_RS01040 223847 .. 223872 + -4.7 -4.46212 GTCAGGTCTGCCACA GGGCAG-ACCAA CGT TTGGCGCTGTCC TTTTATACTCAAACA 69 46 SFV_RS01045 224683 .. 224703 + -4.6 -5.25699 GGCATAAATAAAAAA GGCACCGG GGGAA TCGGTACC TTTTTATTATCTGGT 80 34 SFV_RS01060 227687 .. 227699 + -4.1 -3.14132 TTGGTAGCCCGTATC TTCCA GTG TGGGA TTCATCGCCGCGGCA 47 49 SFV_RS01070 228950 .. 228960 + -2.4 -3.33744 AGGCGCTAAAAATAG CGAC TTG GGCG ATTTTTGCAGCAAAC 45 52 SFV_RS01075 229139 .. 229172 + -16.9 -3.13772 GTTCCGCCAATATTC AGAAAGCCCGAATCA GTAA TGATTCGGGCTTTCG TCGTTTTGGTGAAGT 100 32 SFV_RS01115 NONE SFV_RS01120 236884 .. 236895 + -3.6 -3.36515 GGCATCCTCATAAAG CGGT TGTT GCCG TCTTTGGCAGTAACA 49 161 SFV_RS01175 NONE SFV_RS24440 NONE SFV_RS01180 NONE SFV_RS01185 NONE SFV_RS01190 NONE SFV_RS01195 NONE SFV_RS01200 248983 .. 249000 + -6.9 -4.96848 CCGCGTGATAACCAG AGGGAGC TTCG GCTCCCG TTTTTATCTGGAGAC 82 33 SFV_RS01205 NONE SFV_RS01210 NONE SFV_RS01215 NONE SFV_RS01220 NONE SFV_RS01225 NONE SFV_RS01230 NONE SFV_RS01235 NONE SFV_RS01240 NONE SFV_RS01245 NONE SFV_RS01250 257682 .. 257704 + -7.7 -3.81951 GTGTGGCAACATACG TCAGGTCCG CCACC CAGACCTGA TTTGGTGCTGTAGGA 69 157 SFV_RS01265 NONE SFV_RS01270 NONE SFV_RS01275 NONE SFV_RS01280 NONE SFV_RS01285 262144 .. 262168 + -13.6 -3.30124 AGCGGCGTAATCATT CAG-GGGCGCG GAAC CGCGCCCCCTG TTCTGACGGGTGAAG 100 31 SFV_RS01290 NONE SFV_RS01295 NONE SFV_RS01300 NONE SFV_RS01305 NONE SFV_RS01310 264155 .. 264170 + -3.2 -3.87641 AAATAACCCTTCCTT CCTGAG GATC CTCATG TTTGTCAAACCTGTT 55 21 SFV_RS01315 NONE SFV_RS01320 NONE SFV_RS01325 NONE SFV_RS01330 266476 .. 266494 + -14.6 -3.33037 GATCGCTTCTTTGAC TGCGCCAG CTA CTGGCGCA TTAATCCTTTCGAAT 100 58 SFV_RS01335 268444 .. 268459 + -9 -5.36441 TAATCTGTTAATGAG TCCCAC TCCG GTGGGA TTTTTTATGTACGGA 100 49 SFV_RS01340 NONE SFV_RS01345 NONE SFV_RS01350 NONE SFV_RS01355 NONE SFV_RS01360 NONE SFV_RS01365 NONE SFV_RS01370 NONE SFV_RS01375 274592 .. 274615 + -6.6 -4.24342 AATTATAACTGCAGA TGCCCCCCTA AGTT TCGGGGGGGA TTTATTGATGCAAAA 72 73 SFV_RS01455 NONE SFV_RS24445 285275 .. 285320 + -12.7 -4.53119 TTTAGTTACGAGCGA CATTGCTCCGTGTATTCACTC GTTG GAATGAATACACAGTGCAGTG TTTATTCTGTTATTT 100 229 SFV_RS01465 286742 .. 286756 + -7.1 -2.83903 TCTGCTTTGAATGCT GCCCT TCTTC AGGGC TAAATTTTTAAGAGC 59 460 SFV_RS01485 288360 .. 288385 + -16.3 -3.90762 CCTATGGTGTATAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG 100 97 SFV_RS01495 290249 .. 290271 + -12 -3.45571 AGCCGCAGCAAATAA CAGGGCGTTC GCA GAGCGCCTTG TTGGTGTTTACAGAC 88 149 SFV_RS01500 NONE SFV_RS01505 292588 .. 292609 + -12.3 -5.27335 ACTGAGCTTGTAACA GGCCTGCTG GTAA TAGCAGGCC TTTTTATTTGGGGGA 100 55 SFV_RS01510 NONE SFV_RS01515 NONE SFV_RS01520 293634 .. 293645 + -2.2 -2.71731 CAAGCGACTTTTTAA TGGT GAAA GCCA TGCTTAGCCCATCCC 40 7 SFV_RS01525 NONE SFV_RS01530 NONE SFV_RS01535 NONE SFV_RS01540 NONE SFV_RS01545 NONE SFV_RS01550 296204 .. 296254 + -7 -5.4492 GTCTGCAAAATGCAA TCCCGAAACAGTT-CGCAGGT AATAGTTAGA GCCTGCATAACGGTTTCGGGA TTTTTTATATCTGTG 91 239 SFV_RS01555 NONE SFV_RS01560 NONE SFV_RS01565 297910 .. 297926 + -5.7 -4.62783 AAGTCCATTTAATGA GCCTCAC GAT GCGGGGC TTTTTGCAATAAATG 74 58 SFV_RS01570 299017 .. 299038 + -8.8 -4.09864 GCTTATACCCTACAC GGGATATC TTAACT GATATCCC TTTTAACGGATAAAT 78 442 SFV_RS01575 NONE SFV_RS01580 NONE SFV_RS01585 300819 .. 300873 + -8.4 -4.86731 CAAGGTTAAAACTAA CCGGGCGATGCGTCAATGGCCTTGTG AAT CAAATGGCTACTTTTGCATCACCCGG TTTTATTTACGCACG 89 169 SFV_RS01615 305374 .. 305399 + -9.1 -3.64822 CAGTTTTAATGAATA T-TGCCGGATGT GAT GCATCCGGCACA TTTCACTCACGCCGT 75 32 SFV_RS01635 309391 .. 309422 + -17.3 -3.86776 TAATTATTTGATTTG CTGCCGGATGGCG TTTAAT CGCCTTCCGGCAG TTTCATCCTTCATTA 100 38 SFV_RS01675 316236 .. 316247 + -7.2 -3.30124 ACAATTGCCGGATGC GGCG TAAA CGCC TTATCCGGCCTACCG 63 58 SFV_RS01690 318749 .. 318770 + -8.7 -3.91084 AATAAGCGCCATTCG CCTGGCATA ATTT TTTGCCAGG TTTCATTGCCCGTCA 74 36 fadE 322953 .. 322970 + -12.7 -4.56367 CGCGTAATTGAATAA CGGAGCC GAAA GGCTCCG TTTCTTTATCCGCTA 100 34 SFV_RS01715 324741 .. 324767 + -8 -3.90241 TTAAATAATAAAAAG CCGGAAAGATCT GGA AGAAATTTCCGG TTATTATCGTTGCTA 72 379 SFV_RS01765 NONE SFV_RS01770 NONE SFV_RS01775 337160 .. 337186 + -12.4 -3.59979 CTGCTCTTCTGTAAA TATCCAGGCATT AGT AATGCCAGGATA TTTACAGTGAAAAAG 88 139 SFV_RS01805 344076 .. 344089 + -2.3 -4.44608 GCCATAGCGTGATGT TCCCG GACG CGTGA TTGTTTTTGCATAAA 61 12 SFV_RS01810 NONE SFV_RS01815 345086 .. 345105 + -10 -5.7946 TATTTACCTGTTTAA CAGTCCGT TGCT GCGGACTG TTTTTTTATTCAGGC 100 110 SFV_RS01830 348178 .. 348202 + -8.6 -3.62864 GAGTGTAAACGCGAA GGCGGGTTAA CTTCA TTGACCTGCC TTTAGGGTGCCTTTA 72 16 tauA NONE tauB NONE SFV_RS01845 NONE tauD 351882 .. 351919 + -4.9 -3.85698 AGAGGGTTAGGGTGA GGGGGCGTTCA-CTGT ACTTTCA ACAGGTTAACTCCCCC TTTCTGAGAGGAAAA 59 75 SFV_RS01860 353840 .. 353859 + -8 -2.5076 TCTCCAGACAACCAG TATCACTT ATTT AAGTGATA GTCTTAATACTAGTT 59 55 SFV_RS01865 NONE SFV_RS01870 355181 .. 355198 + -4 -2.90212 GTGACAACTCCTGTT GCTGGC CTGTTC GCCTGC TCTGTCGGGTGCTGG 46 205 SFV_RS01875 NONE SFV_RS01880 356610 .. 356633 + -15.4 -3.14132 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG 100 69 SFV_RS01885 357165 .. 357192 + -11.4 -3.07816 AGTATTAATCAGGAT GCGGGGAT-AACC AAC GGTTTATTCCCGC TTAGCTCGGTCACCA 79 33 SFV_RS01895 NONE SFV_RS01900 NONE SFV_RS01905 361324 .. 361337 + -2.3 -4.08767 GCATTGCGATATTTT CCGCT AAAC AGCGA TTTTGACAGGGTGAA 56 355 SFV_RS01915 361999 .. 362021 + -6.3 -3.49886 GTGAAGCCAGGCAGT GTGTTGATC TCGTT GATCACCAC TTCGTTCTCTGGGGT 58 191 SFV_RS01925 363210 .. 363228 + -5.4 -3.27298 GAATATATTTCATAG CTTTTATT TAT AATAAAGG TTGATAATTAAAAGC 54 3 SFV_RS01930 363717 .. 363731 + -4.2 -5.21459 AAAGTTGTCACGGCC GAGACT TAT AGTCGC TTTGTTTTTATTTTT 79 68 SFV_RS01935 365195 .. 365226 + -14.4 -5.63374 GGCTGAAATAAAACT GCGCCCGGCAGTGA ATTT TCGCTGCCGGGTGG TTTTTTTGCTGTTAG 100 30 SFV_RS01940 365643 .. 365663 + -4.5 -3.91674 GATACCTGATTGAAC CGCCCCGGG TTT CCTGGAGAG TGTTTTATCTGTGAA 60 39 adrA 368360 .. 368379 + -2 -3.87815 ATTTTTGCGGAACCC ATTACCGC CTGA GCGGCAAA TTTATACGCCTGGGC 54 226 SFV_RS01970 369629 .. 369645 + -2.3 -5.64421 GGGATGTATTGAAAT TTTTACT TTA AGTGGAA TTTTTTCTTTACAAT 86 91 aroL 370260 .. 370270 + -4 -4.08394 CCCTGGCACAGACGA TCAA TTG TTGA TTTTAGAGCGCCTAT 59 15 SFV_RS01980 NONE SFV_RS01985 NONE SFV_RS01990 371435 .. 371446 + -3 -4.18018 CGGCTGGCTGCGGAA TTAC TGGT GTAA TTTTGCGTGACAGCC 58 14 SFV_RS01995 371808 .. 371832 + -6.3 -4.8667 CTATCTGTAATTCCT CGCCTTCCCCT TGA ACGGGAGGGCA TTTTTCTGAAATATC 80 31 SFV_RS02000 NONE SFV_RS02005 372725 .. 372744 + -2.8 -3.53164 CTGCGCTAAAAATTA TTGCTCGC CGTA GCGAATAA TTATATGCCTGGTGT 48 6 SFV_RS02015 374771 .. 374813 + -9.9 -3.21924 CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCC-GCG TCTTATCAGGCCTAC 72 30 SFV_RS02035 381439 .. 381466 + -7.6 -3.68962 CAACCCGCTTTTAAC GCCTTGCTCATC GGAC GCAGAGCAGGGC TTATGATTTCTTAAC 67 27 phoR 382817 .. 382838 + -13.1 -4.88918 CATCTTTTATTGCCA TAAGCCAGC CGAT GCTGGCTTA TTTTCTTTGCAGTCA 100 52 SFV_RS02045 384538 .. 384561 + -15.3 -5.64304 GAACATTTGTTTTAA CCACGGGGC TGCGAT GCCCCGTGG TTTTTTATTGTGTTG 100 47 proY 385982 .. 386010 + -14.6 -3.03338 ACTTGCGTTCTGTAA GCCGGTTCAGGA GGAAA TCCTGATCCGGC TATTCCGAAAGTTAT 89 42 SFV_RS02055 388070 .. 388084 + -5.6 -3.58533 TCCAGACGTGGGCGG CGGCTT GCC ATGCCG TTTAACACGTTCTGG 58 157 queA 389666 .. 389690 + -9.9 -2.92667 AGGCAATTAATGAGC GCGTCGGGGAG TAA TTCCGCGGCGC TGGTTTAAACGTTGG 70 12 tgt NONE yajC 391197 .. 391211 + -2.7 -2.93361 CCGTCCTGCCGAAAG GCACC ATGAA GGCGC TGTAATTAAAATTTT 42 6 secD NONE SFV_RS02085 394098 .. 394117 + -10 -5.92337 CGTTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAT 100 50 SFV_RS02090 NONE SFV_RS02095 394696 .. 394716 + -12.6 -4.30576 GTTAACAATCAGAAA TGCCGGGA ATAAA TCCCGGCA TTTTCATAATCAGAA 100 36 SFV_RS02110 NONE ribD NONE ribH NONE nusB 399159 .. 399199 + -7.7 -5.43553 AAAAAGTAATATCCA GGCCGGTAGATTCACGGAA GACTG TTCCATG-ATC-GCCGGCC TTTTCTTTTTTACCT 95 32 SFV_RS02130 NONE SFV_RS02135 400847 .. 400861 + -5.7 -3.61517 ATCCACCGCGTTCAG CAGCT CATCA AGCTG TTCTTCCCGCGAAGT 58 169 SFV_RS02160 406823 .. 406833 + -3.2 -3.63968 ACGATACGCCCGGAA CGGT GGA ACTG TTTAACGGTTTCAAC 51 380 SFV_RS02175 408673 .. 408690 + -12.7 -4.1196 AGCTACTGATTGTCA GGGCCAC CGTG GTGGCCC TTTTGACCATGCATT 100 53 SFV_RS02195 415843 .. 415885 + -8.4 -4.56914 GCTTGAGCTAAAAGG GGGGGGAGGGAGTGAGTAAA GAA TATACTCTTTCTGTCCCTCC TTTTAGTTTGAATAC 87 7 SFV_RS02200 417037 .. 417084 + -4 -2.62184 CAAAAGTGGTAACGC TGCTCAGCCCCCGGCTAAGGCAA AAC TTGCCCTGGCGGGTGGC-GATAA TAATCTAAGCCGCGA 44 29 SFV_RS02280 427534 .. 427545 + -5.8 -2.75343 GGAGCAGGAAGCATC GCGT AAAA ACGC ATTTGCAACTGTCGG 50 20 SFV_RS02285 427724 .. 427745 + -3.6 -2.66232 TCGACTCATAAAAGT GATGCCGC TATAAT GCCGCGTC CTATTTGAATGCTTT 42 13 SFV_RS02290 429216 .. 429239 + -12.4 -5.9873 TAAATTCGCACAAAG GCCCGTCACC GCCA GGTGGTGGGC TTTTTTTTGTCATGA 100 60 SFV_RS02295 430057 .. 430074 + -4.7 -2.99449 TCGTAATTGATGCCA GAGGCGC AACT GTGCCGC TATACTTATCTAGGG 49 31 clpX 431485 .. 431503 + -11 -4.3623 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT 90 59 SFV_RS02305 434026 .. 434055 + -13.6 -5.72616 CACTAATAAAAACAG GGCTGGCAGGCT AATTCG GGCTTGCCAGCC TTTTTTTGTCTCGCT 100 58 SFV_RS02310 434510 .. 434529 + -10 -5.7827 GTGACGAAGTTCAAG GGCGCATC TACT GATGTGCC TTTTTTATTTGTATT 100 61 SFV_RS02315 436586 .. 436601 + -8.2 -4.39571 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA 79 74 SFV_RS02320 437096 .. 437118 + -10.7 -2.96274 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAAC 75 62 SFV_RS02325 437848 .. 437870 + -6.3 -3.8901 AACGAATATCTTTCG CCATGCC CAAACTGAC GGCATGG TTTAGTGCTTTCACA 65 322 SFV_RS02340 440991 .. 441006 + -11.8 -6.15259 AGATCCCTTCCAGCA CCGGGC AATT GCCCGG TTTTTTTTTGCGTTG 100 43 SFV_RS02345 NONE SFV_RS02350 NONE SFV_RS02355 445198 .. 445221 + -8.9 -4.68645 GGTGCAAAAATGTAA CGCACTGTG CACTGT CATAGTGCG TTTTCATTTTCAATC 90 62 SFV_RS02360 NONE SFV_RS02365 447013 .. 447039 + -11.7 -5.68023 AAGCACTGCAAAAAA TAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA 100 42 SFV_RS02375 448773 .. 448798 + -9.8 -5.61596 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT 100 103 SFV_RS02380 450117 .. 450144 + -12.8 -3.14132 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCCGCCCGGAG 86 8 SFV_RS02390 451667 .. 451685 + -5.2 -5.02074 TAGTGATTGATCATT TCACGCAG CAA TTGCGGGA TTTTTTCCGAGGTGA 80 485 SFV_RS02430 460604 .. 460621 + -9.9 -2.51951 AACCCTGAATCTGAC TCCAGGA TTTT TCCTGGA CATTTTCGTCGTTGC 68 39 SFV_RS02435 464466 .. 464488 + -9.8 -2.88603 CATACTCTTTCCATT GCTAGCGGGT TAA GCGCGCTAGC CTGTTTTCGATTTTT 70 411 SFV_RS02455 465475 .. 465492 + -2.6 -4.07568 GCAATTATTGCGTAC AGCCAG TACATT CTGGCG TTTTCGAGCACAGGC 56 59 SFV_RS02460 466197 .. 466221 + -9.9 -3.09492 CACAAGATGTGCATT CAGCCTCGCCG TTC TGACGGGGCTG TGTTAGCATTACCCC 71 77 SFV_RS02465 468201 .. 468217 + -10.9 -3.25015 TCCGCCCCATTTGAT CGTAAGC ACA GCTTACG TTCGTCATCCTTAAC 78 27 SFV_RS02470 468561 .. 468574 + -2.3 -2.64099 ATGCAGCTGCCGCCT GGCTT TAAG ATGCC GTTCTGATGCAAACC 39 5 recR 469195 .. 469212 + -11.3 -2.55818 TTTTTAAGCAAACGA GAGCAGG AGCA CCTGCTC TCGCTTGAAATTATT 77 34 SFV_RS02480 471175 .. 471202 + -15.7 -5.50723 GGTTTCCTGATGTCA TGCCGGATGAC CTTTGT GTCATCCGGCA TTTTTCTTTTCATCA 100 31 adk 472002 .. 472014 + -4.8 -3.54129 TCGGCTAATCAAGCC GCAG CAGAT CTGC TTTCGGGCAGGTCTG 56 33 SFV_RS02490 473113 .. 473137 + -5.7 -4.3129 GTAAAGAACTGAGCG CCGTCG-CGA AGAGCC TCGTCGGCGG TTTTCATCATCCGTG 70 50 SFV_RS02500 475519 .. 475548 + -12.1 -2.82803 ATCGTCGGTTCGTAG GCCAGATAAGGCG TTCA CGCCGCATCTGGC ATTTGGCTCTCGATG 79 44 ushA 480811 .. 480822 + -2.2 -5.24129 GGGGGCGTCGATAAT CGTT GGCA GACG TTTTTTCTGCCCCAG 79 200 SFV_RS02530 482709 .. 482722 + -8.1 -3.30124 ACCATTGCCTGATGC GACGC TTAC GCGTC TTATCAGGCCTACAA 65 105 SFV_RS02540 NONE SFV_RS02545 487847 .. 487857 + -3.2 -3.4298 GTATAACACCTCTCT GTGC GCA GTAC TTCCTGTATTATTGT 50 35 SFV_RS02550 488539 .. 488558 + -2.1 -3.67792 CAAAACGTCGGCCAA TCAGCTGC TGCCC GC-GCTGG TTTAAATGACTATCG 49 196 SFV_RS02565 NONE SFV_RS02570 491333 .. 491366 + -16.8 -2.81547 GAAGAAGAAATGATG CGATGCCGGATGCG CAGCAT CGCATCCGGCGTTG TGGTTCATGTGCCGA 100 28 SFV_RS02590 NONE SFV_RS02595 496888 .. 496912 + -12.9 -3.11999 GTCGGTTTTTTTAAA GGCCGAAGG AGGTAAA CCTTCGGCC TTAGCTACGTTTCCT 86 200 SFV_RS02610 500206 .. 500216 + -3.2 -4.18197 GAAAGTATTCCTGAA CAGG AAC TCTG TTTTGCGTGACGCCT 60 5 SFV_RS02615 501132 .. 501149 + -12.7 -5.40474 TAGTGTCTGTCGCAT CCCGCTC TGCG GAGCGGG TTTTTTTGACAAAAT 100 38 SFV_RS02620 NONE SFV_RS02625 503271 .. 503288 + -2.7 -3.25304 TAGCAGCAGCGATTC GTTGG TAATGACT CCAAC TTACTGATAGTGTTT 45 18 SFV_RS02650 NONE SFV_RS02655 507510 .. 507524 + -7.1 -3.30124 CACCATGCCTGATGC GACGC TTGAC GCGTC TTATCAGGCCTACAA 63 66 cysS 512087 .. 512110 + -16.8 -3.46602 GTAATTGCGCAATTG CCGGATGCGA GTTT TCGCATCCGG TTATCGTCTGCGCCA 100 37 SFV_RS02700 514814 .. 514833 + -5.1 -2.75498 ATGAGATACGAATAA TCAAAAC CACGTT GTTTTGA ATTATATATCACGTC 49 26 SFV_RS02705 NONE SFV_RS02710 516679 .. 516698 + -5.7 -3.16191 CCATAATGCGTGCAC TGGCG-CG ACATC CGACGCCA TTCATGGCCATATCA 52 512 SFV_RS02725 NONE fimH NONE SFV_RS02735 519588 .. 519602 + -4.4 -3.35344 TATGATCAATTATAA TTAATA TTA TATTAA TTCGTATAATTTGGC 52 22 SFV_RS02755 522113 .. 522126 + -2.3 -4.03001 ACACTCTGTGACAAT CTGGC TATA GCTGG TATTTTCGTTTTTTA 56 257 SFV_RS02790 NONE SFV_RS02795 NONE SFV_RS02800 533765 .. 533778 + -5.3 -3.28712 AAACTGCGTACTATT TATGG TAAA CCATA TTCTGGCCCACAAGA 54 210 SFV_RS02805 534058 .. 534078 + -4.5 -3.91674 GTTCGACAACTGAAC CGCCCCGGG TTT CCTGGAGAG TGTTTTATCTGTGAA 59 28 SFV_RS02825 536752 .. 536771 + -4.2 -3.62046 TGTATTCCCGTATTA CTGAGATG GCTT CATCCCGG TTATTAAAACGATAG 53 176 SFV_RS02855 NONE SFV_RS02860 NONE SFV_RS02865 546245 .. 546271 + -16.7 -5.65513 CCGACAAAACGATGT CCGCTCTCATC CATTC GATGAGAGCGG TTTTTTTAATTACTG 100 57 SFV_RS02895 551626 .. 551648 + -7.7 -3.81951 GTGTGGCAACATACG TCAGGTCCG CCACC CAGACCTGA TTTGGTGCTGTAGGA 69 489 SFV_RS02920 554656 .. 554696 + -9.2 -3.65046 GGGTCAGTACACCCT GGGGCTGCCACTCCAAA CCAGACAA TTTGGA-TGGTAGTCCC TTCTTCGCATGGAGG 75 56 SFV_RS02925 554946 .. 554975 + -17.9 -4.19735 ACCTGCTTTACACTT TCGCCCGCGGTCA GTGA TGGCTGCGGGCGA TTTCGTTTTAAGAGC 100 97 SFV_RS02930 555378 .. 555410 + -10.6 -3.32963 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GTAA TCCCCGCATATCCGG TTGTCAGGTCAGAGT 80 26 SFV_RS02945 NONE SFV_RS02950 NONE entF NONE SFV_RS02960 564885 .. 564911 + -8.2 -5.85425 AAGTTGGAGTCATTA CCCATAATTA CAGAAAA TAATTATGGG TTTTTTATTTGTTTG 100 39 SFV_RS02965 565446 .. 565468 + -8.5 -2.70932 TGGAAGAGTACCTGC GTTCATCAC CTTAT GTGATGGAC TAATTAAAAGAGGCG 64 0 SFV_RS02970 566208 .. 566218 + -4 -3.66356 TGATGGCAGACCACT TAGT TTA ACTA TTTGCGGTTGAAGGT 53 18 SFV_RS02990 570738 .. 570756 + -3 -4.15249 TATAGACAATGGCAG TGACCGGC TGC GGCGGTAA TTTGATTTGCTCTTT 60 403 SFV_RS03000 NONE entE NONE SFV_RS03010 NONE SFV_RS03015 NONE SFV_RS03020 576536 .. 576548 + -5.5 -3.69395 TTCAACTCCGATTTA CATGG TTA CCGTG TTGTTAAATCGTACA 59 121 SFV_RS03025 578844 .. 578876 + -4 -3.34715 TTGATAGCATTTGTA G-GCCGGATAAAGCG TTCA CGCCGCATCCGGCAC TCTTTCAGCAACATG 50 143 SFV_RS03030 579380 .. 579398 + -8.8 -3.53012 TAAGCGACTTTGGTG CCGTGAAG AAA CTTCTCGG TTTGCGGCAGGACAG 67 300 SFV_RS03040 581500 .. 581534 + -7.2 -3.93288 CCAGGCGCGGGAATA TTGACGGTCGGCAA ACAACTC TTGCAGGCCGTTAA TTTGCTTCAGTCGCA 68 53 SFV_RS03075 584719 .. 584736 + -4 -2.90212 GTGACAACTCCTGTT GCTGGC CTGTTC GCCTGC TCTGTCGGGTGCTGG 46 56 SFV_RS03080 585849 .. 585865 + -4.5 -4.86621 ATAAAGTAAACACTG TAAAGCA GAG TGTTTTA TTTTTCATTCGCGCT 73 317 SFV_RS03095 588857 .. 588876 + -13.6 -4.63218 AATTCACCTAATTCT TCGGGTGC TGCG GCACCCGA TTTTCTTCCCCGCAC 100 163 SFV_RS03100 590560 .. 590583 + -13.1 -5.27923 ACCTGCAATTGCTTA GCCGCCGGG GTCAAA CCTGGCGGC TTTTTTATGGCATTA 100 56 SFV_RS03110 592742 .. 592753 + -5.8 -3.31263 CATCCTCTGGGCAAA GCGA GTTA TCGC TTGTGCAGATGGGAT 56 230 SFV_RS03175 602661 .. 602683 + -4.9 -2.90349 GAATTAATTCCTAAA GAGCATTTG CTTCA TGAATGCTC CTTTGCATTTAGCAA 50 92 SFV_RS03180 603636 .. 603656 + -9.7 -3.2964 CCAGTTCATTTATAG CCACCTGAT TTA ATCAGGCGG TTATCGACACACTTT 74 13 SFV_RS03205 607386 .. 607417 + -3.7 -4.30719 ATGCCGACAGCGTGA TTATCGCCACGCT GTGCTA AGCGTGTTGACAA TTTGTTATGAAACAC 64 6 SFV_RS03215 NONE SFV_RS03220 NONE SFV_RS03225 NONE SFV_RS03230 NONE galM 613471 .. 613487 + -10.1 -4.27467 GCTGAGTAATGTTAA GCCCTCG TCA TGAGGGC TTTATCTTCATATTG 85 32 gpmA 614446 .. 614466 + -8.3 -5.73978 TTAAAAAATGAGAAA GCCGACT GCAAGTG AGTCGGC TTTTTTGTTTGTCGT 100 52 SFV_RS03250 NONE SFV_RS03255 616356 .. 616375 + -9.3 -4.78661 AAAATAGCCAATAAT GGGAGAG CGGAGT CTCTCCC TTTTAATTTTTCACT 90 47 SFV_RS03260 617395 .. 617425 + -15.5 -3.15544 TCACCATTAATGGGA CAGCGCGCGTGAG CCTCT TTCACGTGCGCTG TTGATCCACATCCGG 100 31 SFV_RS03360 635230 .. 635263 + -6 -4.33582 GTCGAAACCGACAGC CCTTCGCC-ATTCCT GTAGA GGGAAGCGGCGAGGG TTATTTCTTATTACA 73 74 gltA 646994 .. 647021 + -15 -4.99035 TAAGTTGTAAATATT TTAACCCGCCGT TCAA ATGGCGGGTTAA TTTTTATATGCCTAA 100 52 SFV_RS03420 647934 .. 647951 + -14.1 -3.76781 AATAAGTATTACTTT GGCGGCG CTAT CGCCGCC TTTCATAAAATATTT 100 36 SFV_RS03425 NONE SFV_RS03430 NONE SFV_RS03435 651863 .. 651881 + -4.5 -3.72073 GTCAATTTTTCCATT TCACCGG AAACA CAGGTGA TTGATTTTGGTAAAT 58 428 SFV_RS03440 652261 .. 652288 + -12.8 -3.35522 TAACTGATTTGCCAT GATGCCCTTTGC AGCC GGAAAGGGCATC TCTTTCAGAAAATTG 90 169 SFV_RS03445 NONE SFV_RS03475 659110 .. 659151 + -10.2 -3.46936 ATAATAGGCCAGCAC CG-ATGCCTGATGCGACGC TTGAC GCGTCTTATCAGGCCTACG TATTTCCTGCAATTT 77 37 SFV_RS03490 661600 .. 661626 + -10.2 -5.28561 TTAAATATTAAAAAA GCTGGGAAGATT TAA AACCTTCCTAGC TTTTTATTCTGTCTT 100 37 kdpF NONE SFV_RS03530 670729 .. 670742 + -2.3 -3.03443 CTGCCCTGGCGCTTG GTCCG GTGG CGGAA TATCTCTCCTGATGA 42 0 SFV_RS03535 NONE SFV_RS03540 NONE SFV_RS03545 NONE SFV_RS03550 676799 .. 676836 + -5.2 -4.15222 GTGATTAATTTATTA TTAAACCTGCGCCGAATA TTAT TATTT-G-GCAGGTTTAA TTTCTTAACGCAAAT 63 69 SFV_RS03560 NONE potE 680976 .. 680995 + -5.6 -5.8187 AAGCAAAGTAAAAAA GGGCGATC TTGC GACCGCTC TTTTTTTATTAAATG 100 43 SFV_RS03580 684266 .. 684287 + -7.9 -2.94232 TTATGGCGCGCTATC CATCCGGGC AGAG GCCTGGCTG ATTGTTTCCCCCGAA 61 116 SFV_RS03585 684633 .. 684646 + -2.3 -2.90227 TTCATGTAGCACAGT GTGCA GTCC TGCTC GTTTGCTGATTCCGC 41 50 SFV_RS03590 685284 .. 685311 + -16.4 -3.19463 TAATGCCTGATGTGA TGCGGCGTAGAC TCAT GTCTACGCCGTA TTAATAGATAATGCC 100 31 SFV_RS03600 NONE fur 686034 .. 686051 + -11.3 -5.24129 GCCTGAACGAGAAAA GCCAACC TGCG GGTTGGC TTTTTTATACAAGGG 100 45 nagB 693415 .. 693427 + -4.1 -4.15748 CCCTGCCCTGGTTCC TTGCT CAG GGCAA TATTTTTTAAAATCG 62 48 nagA NONE SFV_RS03640 695850 .. 695863 + -3.9 -3.37975 TTTTATAGTGGCGCT TATTG TTGT CAATA TTCTGGGTAGTCCAT 50 46 SFV_RS03645 696955 .. 696969 + -7.8 -5.40072 ATAGCTTGCGCACAG TGCTGC TTT GCGGCA TTTTTTTAAACAAGC 95 351 asnB 698702 .. 698725 + -13.8 -4.56133 GTAAGAAATGCGGTA CTGCCCCGGA GAAA TCCGGGGCTG TTTTAGTTATTGCGC 100 37 SFV_RS03655 NONE SFV_RS03660 NONE SFV_RS03665 NONE SFV_RS03670 699462 .. 699478 + -3 -3.33815 CATCGAAGAAATAAT CTG-GCT ACGT AGCTCAG TTGGTTAGAGCACAT 46 39 SFV_RS03675 NONE SFV_RS03680 NONE SFV_RS03685 699786 .. 699801 + -10.4 -5.1417 AGCCACATTAAAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTTCTGC 93 36 SFV_RS03695 702679 .. 702704 + -9.7 -5.51046 ATCAGCCGTAATTCT CA-GGCCTGCCG TTC CGGTGGGCCTTG TTTTTTCTCTCTTTA 100 30 SFV_RS03700 NONE SFV_RS03705 704362 .. 704385 + -8.8 -4.43477 ACTGGCAGACGTCCC CGCCGTTGGT GATT AACGACGGCG TTTTGATTAACTAAC 84 56 SFV_RS03710 NONE lnt 707133 .. 707151 + -6.1 -3.05384 ACATCAATATCTTTA CATTTAG CCAAA CTAAATG TTACCTAACAGGCAC 56 296 SFV_RS03720 708290 .. 708317 + -16.4 -5.26316 TGGGTAACAATCTTC GAGGGTAGCAGT TAAC GCTGCTACCCTC TTTTTTCTGGAGTAG 100 148 SFV_RS03725 NONE SFV_RS03730 NONE artP 710594 .. 710606 + -3.3 -3.71686 CAACAAGGAGCAACA ATGGC ACT GCCAA TTCTGTTAGATTGCG 53 143 rihA 711541 .. 711578 + -9.3 -3.77089 TTAACACTCGTCATT GATTAAGATCACCACGCG TTA CCTG-GGTGGTCTTAATC TATTTATCTCTTTTT 77 37 SFV_RS03745 713470 .. 713489 + -2.8 -3.21416 TCTTCATGGTTTTCA GGTGTTGG CTCA TCGACATC TTCATCCTCCGGCTC 45 212 SFV_RS03760 716546 .. 716574 + -3.7 -3.51034 TCGACCAGTGAACGC CCCAGCGCAGAGA GTT TTTCATCGCTGAG TATTTCGTATAAATG 51 417 SFV_RS03775 719922 .. 719937 + -3.2 -3.37344 CGTCGATATCACGTT CGCC ATTGCGCA GGCG TTCGTTCAGTGACGC 47 511 leuS NONE SFV_RS03790 723398 .. 723409 + -2.2 -3.28712 CACCATGCTGGGTAA CTGA TGAT TCGG TTGTACCCGGAACAA 45 22 holA NONE SFV_RS03800 725065 .. 725079 + -2.8 -2.90075 TTAACCAACAAGGCT TGTATC GCT GATACC TGTCGTTACGGAGGG 42 15 SFV_RS03805 725854 .. 725870 + -6.5 -3.53343 AATCTGCGGCGCGGG GTGGGAT GAT AGCCCAC TTTCGAAAGCCGATT 60 169 SFV_RS03810 NONE SFV_RS03815 726738 .. 726766 + -8.2 -2.78679 AGCATCACCACCAAC CATCCTTATCAC CGTGA GTGATAAGGGAG CTTTGAGTAGAAAAC 60 5 SFV_RS03820 NONE SFV_RS03825 NONE SFV_RS03830 NONE SFV_RS03835 732313 .. 732332 + -15 -3.50456 GCATCAGTAAAAAAA CTCCCGCC TTCT GGCGGGAG TTGCTATTTAATTAC 100 84 SFV_RS03840 NONE SFV_RS03845 733384 .. 733405 + -5.1 -3.23395 AATTCCATACATCAA TGGCCCAAT TTAC ACTGGGTCA TTACTCATAATACCT 52 39 SFV_RS03855 734656 .. 734672 + -2.1 -3.62864 CAATTTTACATTTTC GCGACCG CTT TGGCTGC TTTCAGGTCCGTTTC 49 99 SFV_RS03860 735793 .. 735810 + -11.3 -5.36441 CTGTCTGATAAAAAA CCCGCTT TTTG AAGCGGG TTTTTTGTATCGAAC 100 62 SFV_RS03875 737467 .. 737483 + -9.4 -4.36729 AAAGACCAAAAAAAA CCCGCT GATTA AGCGGG TTTTGAATTCTTGCT 86 39 dcuC 740434 .. 740456 + -13.4 -4.0162 CAAGTAAATAGTAAT GCCGGAGGCA AGT TTCCTCCGGC TTTATCATGTCACCC 100 34 SFV_RS03905 NONE SFV_RS03910 NONE SFV_RS03915 745192 .. 745202 + -4 -3.89822 ATGCCATCAACGTAC GAAA TGG TTTC TTTGTACACTGGCTC 57 328 SFV_RS03975 754281 .. 754300 + -4.2 -3.72695 GGTCGCTGATGATTC CG-TCCCGG ATA CCGAGAACG TTTCGTCCAGCAACT 56 185 SFV_RS03985 NONE SFV_RS03990 756026 .. 756038 + -4.1 -3.44051 ACCCAGCGCACTATG CGGAT GCC ATTCG TTATAATGCTCGAAC 52 354 SFV_RS04020 NONE SFV_RS04025 760866 .. 760902 + -10 -3.66995 TGCAAAAAACAGTAG CCGGCACTGCCGGCGG AGGTG CCGTAGGCAATGCCTG TTGATATTTTTTCCA 78 97 SFV_RS04115 768967 .. 768995 + -4.7 -4.82901 ACAAACTTTCAAACA CTTGTGTTTTTTA CAT TAAAAAACTTAGG TTTTTCTACACAAAA 73 75 SFV_RS04120 NONE SFV_RS04125 769697 .. 769713 + -6.5 -3.6135 TGAAGCCCTTCGTAA TCCTCTG GCT CAGTGGA TTTGCCCCTATATTT 62 243 SFV_RS04140 NONE SFV_RS04160 NONE SFV_RS04165 775174 .. 775196 + -6.2 -3.84825 CACGGCTTCTGACCA TGGCTTCGGC AGT GCGGAGGTCA TTTGCTGTCACTCCC 63 343 SFV_RS04175 778573 .. 778596 + -15.3 -3.15379 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACTTATCT 100 38 SFV_RS04185 NONE SFV_RS04190 782443 .. 782466 + -13.2 -2.89055 TCCATTTATTATCTT TCTGCGCACT TCAC GGTGCGCAGA TATCTGGAGCATTTG 86 169 SFV_RS04195 784721 .. 784769 + -9.5 -3.53811 GATGCGATGCTGGCG CATCTTATCCGACCTACAAATCG CAT CGAACCGTAGGCCGGATAAGGCG TTTACGCCGCATCCG 75 84 SFV_RS04215 NONE SFV_RS04220 NONE SFV_RS04225 NONE bioD 791764 .. 791815 + -4.8 -3.2375 GTAGCCATTCTGTAT TTGGTTAAATTGCGAGCGAGATCG CGTCTT CGAT-TGACT-GCAATTTAACCAA TTAAATTCTAAAATA 52 37 SFV_RS04235 794443 .. 794500 + -15.5 -3.12482 GCAATATATTGAATT TGCGCGGTTTGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATAAACAACGCGCA CTTTGTCTTCAATAG 93 116 moaA NONE SFV_RS04255 NONE moaC NONE moaD NONE moaE 798530 .. 798553 + -2.3 -5.4505 GCCCGGGAGAGCGAT CTGCAGGCG GCAAAA CGCTGGTAG TTTTTTGTTAGCCGG 77 2 SFV_RS04275 799414 .. 799432 + -8.1 -5.84381 TTTTCACCATCACTA TCCCGGC CATGT GTCGGGA TTTTTTTCTTACTAA 100 45 SFV_RS04280 800707 .. 800717 + -2.4 -4.25074 CGAATTTCCATGAAG GCAG CAC CAGC TTTTGCCCTTTGATG 58 420 SFV_RS04300 804239 .. 804249 + -8.2 -3.57263 GTGGCGACAATTAAC GCCG GTA CGGC TTTGCCGATGAAGAT 69 418 SFV_RS04330 NONE SFV_RS04335 811248 .. 811258 + -4.6 -3.57462 TGCTGTTCGAATTTA GCGC GAA GTGC TTTACGCATCACCTG 55 187 dinG 813808 .. 813821 + -9.5 -3.25223 AAAACGAAATCCCCA CGCCG TCGG CGGCG TTAATGATGTGAGTC 72 8 SFV_RS04350 814827 .. 814850 + -12.5 -4.07568 TTAATTTTTATCTCA GCCGGATGA GCCACG TCATCCGGC TTTTACCCCACCGCA 100 37 SFV_RS04355 816193 .. 816226 + -9.5 -3.07344 GGTTCGGATTTTGTA GGCCTGATAAGACGC GGTA GCGTCGCATCAGGCA TCTGTTGCCGGATGC 71 177 SFV_RS04380 821274 .. 821284 + -2.4 -4.57569 GACTGGCATTACCCA CGCC GGG GACG TTTTTGAGCGCGTCG 63 43 SFV_RS04395 823545 .. 823556 + -4.4 -4.21275 CCAATAATCAGCCCG CGAA TTTC TTCG TTTTCCATCAATTCC 64 269 SFV_RS04405 825682 .. 825693 + -7.2 -3.37796 TTTTTTGCCGGATGC GGCG TGAA CGCC TTATCCGTCCTACAA 63 85 ompX 831022 .. 831051 + -12.3 -4.70879 ATCACTTTGGTGATA TAAAAATCCGCCT CTCG GGGCGGATTTTTG TTTTTAAGGTTTCGG 100 40 SFV_RS04455 NONE SFV_RS04460 834825 .. 834843 + -11 -4.75954 CTGGCAAATAAAAAA GGCGGATT ATG AGTCCGCC TTTGTTTTACGTTTT 95 44 SFV_RS04470 837939 .. 837949 + -8.2 -4.62069 CGCGGGAAGTCGCCC GGCG ATG CGCC TTTTTCCAGTGCGGC 88 369 SFV_RS04495 844451 .. 844489 + -13.8 -2.62003 CAGATAAGGCGTTCA CGCCGCATCTGGCGTCTG GAG CAAATGCCTGATGCGACG CTTGTCGCGTCTTAT 86 132 SFV_RS04510 NONE SFV_RS04515 NONE SFV_RS04520 NONE SFV_RS04525 NONE SFV_RS04530 853001 .. 853013 + -3.4 -2.58398 CCTCACAGGAAATTA TTGC CCTAA GCAA GTGTTGTAACTTTCT 42 73 SFV_RS04535 NONE SFV_RS04540 856828 .. 856853 + -13.3 -2.60244 TAATCATTATTCGCA GGCCGGACAAA TGAT TTTGCCCGGCC TGAATTAATTAAACC 84 38 bssR 858791 .. 858811 + -12.6 -3.48703 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT 93 33 SFV_RS04555 NONE SFV_RS04560 860363 .. 860384 + -2.9 -3.3581 GCTTCCGCACGACGT GCCGGTG AGTCGATC CACAGGC GTTTTTGCCCGTACT 47 380 SFV_RS04570 861828 .. 861844 + -4.4 -2.64155 GGGGCAGGCGAAGCG GGCT-CC GTGA GGTAGCC TGAGTTTAACGGACA 46 11 SFV_RS04575 NONE SFV_RS04580 NONE SFV_RS04585 863357 .. 863381 + -13.6 -3.39862 TTAATCTTCTGATAA CCGGATGGCG CGAAA CGTCATCCGG TTATACGTCATTAAT 100 37 SFV_RS04600 866321 .. 866347 + -8.8 -3.37464 CGGAGGGTAAAAAAA TGCCTGATTG ATTTGTG CGATCAGGCA TTCTCGAATTAATGG 69 31 SFV_RS04620 869487 .. 869505 + -7.4 -3.29043 ATTAAGACTGATGCC CTGCGGAA AAG TTCTGCGG TTGTGCAAAAAAATT 63 143 SFV_RS04630 871878 .. 871894 + -9.4 -3.29511 GAAAAAATCAGTAAA GCCCTC AACGC GAGGGC TTGTCAGACGATCAG 74 27 SFV_RS04640 NONE SFV_RS04645 NONE SFV_RS04650 874261 .. 874272 + -3.6 -2.78216 TACGACAGAATATTG CCTG AAAA CGGG TGGTTAGTCGCAATC 43 7 SFV_RS04655 874851 .. 874894 + -14 -3.65046 TCCACTGATAATTCC TTTCG-AGCACGCAGTCGCTG CCG CAGTGACTGCGCGCTGCAAAA TTATCTGCTGTTTTT 100 33 SFV_RS04660 NONE SFV_RS04665 876365 .. 876381 + -3 -3.05384 CAATTCGCACCATCA TG-GTGC GCTT GCACACA TTCAATGCCGGAGAG 43 83 potG NONE SFV_RS04675 NONE SFV_RS04680 879370 .. 879394 + -12.2 -4.25104 GCCAACCTGGCTACA TAATGCCGCG CATGT CGCGGCATTG TTTTCATGGAAGACG 95 55 SFV_RS04685 NONE rumB 881499 .. 881514 + -4.7 -4.86621 AAGGCATTCTGATAA CTGTC ATAGGA GACAG TTTTTACTTCCGGGT 75 468 SFV_RS04730 NONE SFV_RS04745 889088 .. 889111 + -3.8 -3.29144 GACAGGTAAGCGGTA CCCTATAATG AAAC CAATATCGGG TTATGCAACGGATAA 49 63 SFV_RS04755 NONE SFV_RS04760 890544 .. 890572 + -8 -4.30978 TCAAAATTCAACTTG GAGACGCCGTAG TGGGT CAGCGGCGGCTC TTTTGCTGACTTGCG 78 158 SFV_RS04820 903558 .. 903607 + -6.6 -5.14965 AACATCGTGGCCATT TGTGGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC-CG TTTTTTACTGGCGAT 84 47 SFV_RS04830 NONE SFV_RS04835 907715 .. 907735 + -12.6 -4.35926 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT 100 41 clpS NONE clpA 910972 .. 910999 + -12.8 -5.38054 AGGTAGGTTGGTGAA GTCCGTAATCTC GTCA GGGGTTACGGAC TTTTTATTTATGGGG 100 51 SFV_RS04885 918610 .. 918639 + -13.7 -2.75577 TGTTAATCCATACAG CAACAGTACTGGG GTAA CCTGGTACTGTTG TCCGTTTTAGCATCG 86 82 SFV_RS04890 922803 .. 922838 + -9.6 -2.89564 TGACTAATTAATGCA TTGCCGGATAAGGCGC GGTA GCGTCGCATCCGGCAC TCTATCAACTGAAAA 70 34 lolA 923568 .. 923589 + -2.3 -3.37634 GTAAGTAGAGGCACC TGAGTGAGCA ATC TG-TCGCTCG ATTTTTCGGATAATA 45 33 SFV_RS04900 924917 .. 924931 + -5 -3.48053 ACGCTACCGTTAATG TTATCG TTG CGGTAA TGTTGTTACTGTATC 56 28 SFV_RS04905 926323 .. 926337 + -9.2 -5.72616 TTCTGAATCTAAAAA GCGCCT TTA GGGCGC TTTTTTTGTCTCCCT 100 51 SFV_RS04910 926842 .. 926859 + -6.9 -3.07816 CCTGCACTAGGTTCG CGCCTGC CTGC GTGGGCG TTCCATGCGTCGCCG 58 31 SFV_RS04915 NONE SFV_RS04920 NONE SFV_RS04925 930408 .. 930435 + -6.2 -5.04733 CGCAAGCTAATCAGT AACAACCGGGGT TTCG GCCCCGGTTCTC TTTTATTTCTGCTTC 83 31 SFV_RS04935 932538 .. 932569 + -7.4 -5.82036 TGTAAATGAATTCAA GCAAAGTGTGAA CTTACTGT TTCACACTCTGC TTTTTTGTTTCTTCT 100 36 SFV_RS04940 NONE SFV_RS04945 NONE SFV_RS04950 NONE SFV_RS04955 NONE SFV_RS04960 NONE SFV_RS04965 935686 .. 935696 + -5.4 -2.57463 CTGTAAAATAATCCT TACG CTA CGTA CTTCTCGGGGCGCTT 50 30 SFV_RS04975 NONE SFV_RS04980 NONE SFV_RS04985 NONE SFV_RS04990 NONE SFV_RS05000 NONE SFV_RS05005 NONE SFV_RS05010 939659 .. 939682 + -12.5 -3.53761 GCGCGGAATAAAAAA GCGGCAACT CAATAA AGTTGCCGC TTTACGGGGAAATTA 93 71 SFV_RS05035 946885 .. 946912 + -4.8 -3.14132 AGGAATAATGTATTA CCTGTGGTCG CAATCGAT TGACCGCGGG TTAATAGCAACGCAA 52 167 SFV_RS05040 948050 .. 948070 + -12.6 -5.4659 GAAATTTTGCTTAAT CCCCACAG CCAGC CTGTGGGG TTTTTATTTCTGTTG 100 45 SFV_RS05045 949495 .. 949520 + -9.8 -5.61596 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT 100 136 SFV_RS05050 NONE SFV_RS05055 951872 .. 951892 + -8.9 -3.66784 AACGATTTGTGGCGT CGGCGCGTA TAA TGCGCGCGG TTATGTTAACGGTAC 75 141 cmk 952633 .. 952657 + -4.9 -3.06696 CGAATTTGCAGTACC CCCGTTGCAAT GGA ATGACAGCGGG TATGTTAAACAACCC 51 46 rpsA 954482 .. 954499 + -14.1 -3.18264 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA 95 111 ihfB 954870 .. 954885 + -6.8 -5.20154 TTGAACGCGAGAAAA GCATCC TGTC GGGTGC TTTTTTCAATTCTCT 87 55 SFV_RS05075 NONE SFV_RS05080 NONE lpxK 960079 .. 960091 + -4.7 -3.20901 TCTGGCAACTAGTTA CGCCG CGG CAGCG TTCGATTGATGGAGT 50 29 SFV_RS05090 NONE SFV_RS05095 NONE SFV_RS05100 962361 .. 962374 + -5.3 -4.35675 ATTTTGGGAGGAGTG TCGTA CCGT TACGA TTTTCCTCAATTTTT 68 65 SFV_RS05105 963612 .. 963633 + -2.2 -3.64716 AATCGCCTGTTTCAC TGCCGCAG CTTCTT CTTCGGTA TCTTTTGGCAAATCC 49 269 SFV_RS05115 NONE SFV_RS05120 NONE SFV_RS05125 NONE mukB 971516 .. 971533 + -12.7 -5.26119 GCGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA 100 32 SFV_RS05135 973094 .. 973111 + -5.5 -3.2396 ATATACTGAAGATAA GCCTGAT GAGT AACAGGC TTGCTCGTCATACTT 54 119 SFV_RS05140 975141 .. 975182 + -5.2 -3.28791 GTCACTGCTAGGGTT GAGTCATCTTGAC-GTCTG CTTTA CGGGCGGTTAAGGTGCCTC TTGTGCGCCAGAAGT 54 111 SFV_RS05145 NONE SFV_RS05150 976647 .. 976664 + -12.7 -3.74868 TTGTCATCAGTCTCA GCCCGCT TTTC AGCGGGC TTCATTGTTTTTAAC 100 213 SFV_RS05160 978118 .. 978132 + -2.1 -3.25719 ACGCCCAGTTTGTTG TCAGA ATCGA TCTGG TTGATGATGTAGTCA 43 102 pepN 985425 .. 985439 + -7.1 -3.30124 CAAAATGCCTGATGC GACGC TTGAC GCGTC TTATCAGGCCTACAA 63 52 SFV_RS05225 NONE SFV_RS05230 992258 .. 992278 + -3.3 -2.84325 TGTTATTATTAAGTC TAATGTCAT TTA AAGGCATTA TCATATTTACGAAGA 44 271 SFV_RS05235 993258 .. 993277 + -5.7 -3.16191 CCATAATGCGTGCAC TGGCG-CG ACATC CGACGCCA TTCATGGCCATATCA 52 512 SFV_RS05250 NONE SFV_RS05255 NONE SFV_RS05260 NONE SFV_RS05265 NONE SFV_RS05270 NONE SFV_RS05275 999874 .. 999884 + -6.8 -3.30635 AGGAGCAAAATCTGC CCTG AAA CAGG TTCTGAAAACGTTTG 61 21 SFV_RS05280 1001021 .. 1001064 + -4.8 -3.33573 CTTCGAATTCCTCTT TATAAGATAATCAGGGCT TTATTTTC AGACCTGGTTGTTTTATA TTCATCGTTGTTGCT 54 47 SFV_RS05285 1001894 .. 1001910 + -7.3 -3.90922 GATTTTCTAATTGCT CCAGCAA CAC TTGTTGG TTATTTCCACGAAAT 68 204 rlmL NONE SFV_RS05300 1007172 .. 1007186 + -2.8 -2.69799 TATCAGGCATGAAAA CCAACA CTT TGTTAG TCATCTGTAAAATAG 41 105 SFV_RS05305 NONE SFV_RS05310 NONE SFV_RS05315 1010703 .. 1010729 + -10.8 -6.02919 GATTTGTAAATATAA CCGTCTCCGGTA TGT TGCCTGAGGCGG TTTTTTTGTTTCTAA 100 48 SFV_RS05320 1011125 .. 1011141 + -13.7 -3.77484 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTTGATA 100 47 SFV_RS05335 1014197 .. 1014212 + -11.8 -4.82901 TAAAGGCAAAAAAAA CCCCGC AGCA GCGGGG TTTTTCTACCAGACG 100 65 SFV_RS05350 1016805 .. 1016824 + -8 -2.5076 TCTCCAGACAACCAG TATCACTT AAAT AAGTGATA GTCTTAATACTAGTT 59 42 SFV_RS05355 NONE SFV_RS05360 NONE SFV_RS05365 1018428 .. 1018438 + -2.4 -3.34517 CCCGTGGTTCAAGTT GCTG CAT CCGC TGTTTCAGGCCAGCT 45 125 helD 1023208 .. 1023236 + -6 -3.09327 CTGGATAATGAAGTC TGCCG-TTGCCAC GTTG GTGGCGACCGGAA TGTTCCATACCGTCG 53 147 SFV_RS05400 1024925 .. 1024952 + -17.1 -4.1673 TGGCCAAATAAAAAA TCCCCGGAAGG CAAAAA CCTTCCGGGGA TTTGTTCAGGGATTA 100 30 SFV_RS05415 1026964 .. 1026995 + -8 -5.06414 TTAGCCGGGCCTTTC GGGAACAGTCGGTA TAAA TAGCGGCTGTTACC TTTTTCTTCACCAAA 91 86 SFV_RS05435 NONE SFV_RS05440 NONE SFV_RS05445 NONE SFV_RS05450 NONE SFV_RS05455 NONE SFV_RS05460 1034219 .. 1034232 + -3.1 -3.57144 GCAATCGGCGAATAC CTCTG GTCG TAGAG TTTCAGGATAAAGAG 51 78 SFV_RS05465 NONE SFV_RS05470 NONE SFV_RS05475 NONE SFV_RS05480 1038544 .. 1038580 + -7.2 -3.95448 AGAACTGTCTAATGC GTAGACCGGAAAAGGCG TTCA CGCCGCATCCGGTC-AC TTTCAGTTTTACTCT 70 95 SFV_RS05525 NONE SFV_RS05530 1048016 .. 1048035 + -2.2 -2.97171 TATCAGTAAGTTGGA GTCATT ACCAATAA AATGAC TGGTTTAGTAAAATG 41 32 SFV_RS05535 1048403 .. 1048416 + -3.1 -2.7263 GCAAATACGCACTGA CCATGC GCC GC-TGG ATTTCACAAAATAAT 43 197 SFV_RS05540 NONE SFV_RS05545 1048803 .. 1048835 + -7.8 -3.79909 AAGTAATGTGATTTT GT-GAACATCACCCC GTGC GAGGTGATGTTCCGC TTGTTGCTAATTTAG 71 30 SFV_RS05560 1053845 .. 1053857 + -4.7 -2.8478 CGTACTACCAGTTCG CGCAG TTC CAGCG GTTTGGTGACGTAAT 47 371 SFV_RS05570 NONE SFV_RS05575 NONE torD NONE torD 1059456 .. 1059486 + -14 -2.73364 ATGAGCTACAAACCG GGAAAGCCGCTGGC GTA GCAGGCGGTTTTCC TGCTTCAGGTGCGCA 86 139 SFV_RS05610 1062321 .. 1062349 + -10.3 -4.61633 GAGGCAGGGGCTAAT CAGGCATAGTTTG CGT CAAACCTTGCCTG TTTTTGAAGATGTAT 91 169 SFV_RS05615 1063715 .. 1063745 + -6.7 -2.7563 GCGGTGAAATAACAG AAAACTCCCCCGC GAGAA GCGGGGGAGTCGC TGGTTAAACGTTTTT 55 29 SFV_RS05665 1071974 .. 1071989 + -5.4 -3.53188 ATACATCCCTATCCA GGTGAT TTGC ATCGCC GTTTTTCTCACTGTC 56 475 SFV_RS05680 1074144 .. 1074155 + -4.4 -3.34344 CGTAACAAATACGAC GCAA ACTC TTGC TTAGTTACAACATAC 52 36 SFV_RS05685 NONE SFV_RS05690 1077038 .. 1077072 + -3.5 -4.66264 CTTCCTTTCTTTACT CGTGTTACCGACGCCG CAAA CGGTGTGCGTAGC-CG TTTTTCGGCATTTTA 66 474 SFV_RS05695 1078000 .. 1078024 + -13.6 -4.33907 AGTGTATTATCGGTG CAGAGCCCGG GCGAA CCGGGCTTTG TTTTGGGTGTTTATG 100 40 SFV_RS05730 NONE SFV_RS05735 1089031 .. 1089043 + -3.4 -2.72511 ATAAAGTGTTCTCCA TGGA TACAT TCCA CTTTCAGCGAATGAA 41 414 SFV_RS05750 NONE SFV_RS05755 1091792 .. 1091811 + -7.8 -3.58256 ATATACGAAAAAAAA GCCCGTAC TTTC GTACGCGC TCTTCTTTAAATATG 69 185 ghrA 1093099 .. 1093120 + -7.3 -3.05384 AATAAAGCATCAGGA TTCCTGCTA TCCT TGGCGGGAA TTGAATACAGGAGAG 60 39 SFV_RS05770 NONE SFV_RS05775 1094481 .. 1094497 + -5.9 -3.07622 CGTCACTCATAACTG CAACAGA TAA TTTGTTG TTGCATAAAATGTGT 52 51 SFV_RS05780 1095080 .. 1095101 + -8.7 -5.03994 CGCTTAAACAGTAAA TGCCGGATT ATTA ATTCCGGCA TTTTTATCTGTCAGG 91 57 csgB 1098671 .. 1098685 + -2.8 -3.23393 TTTTAAAAGTAGCAG CAATTG CAG CAATCG TATTCTCCGGTAGCG 45 88 SFV_RS05815 NONE SFV_RS05820 NONE csgA 1100272 .. 1100287 + -10.4 -5.75342 TTTGTATTACAGAAA CAGGGC GCAA GCCCTG TTTTTTTTCGGGAGA 100 48 csgC NONE SFV_RS05835 1101162 .. 1101176 + -5.7 -2.56181 AGAAGGTGTAAGGAG GCGTT ATGAA AACGC GTATTCATGTTGTGC 50 115 SFV_RS05840 NONE SFV_RS05845 1103100 .. 1103110 + -3.2 -3.83568 TGGCGTCGATATTGC CCGT GGA ATGG TTATTGTAAATGTGG 53 6 mdoG NONE SFV_RS05870 1108900 .. 1108925 + -16.3 -3.90762 GCGTTATGCCGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG 100 176 SFV_RS05885 1112443 .. 1112463 + -4.5 -3.91674 TGAAAAATAGTGAAC CGCCCCGGG TTT CCTGGAGAG TGTTTTATCTGTGAA 59 92 SFV_RS05905 NONE SFV_RS05910 NONE SFV_RS05915 1115356 .. 1115370 + -5.6 -4.15106 GCTAACGCTCTTAGA GCACGT TAC ACGGGC TTTTAACGCTTCATC 67 91 SFV_RS05925 NONE SFV_RS05930 1117413 .. 1117423 + -3.2 -2.63079 ATTTTCTCTGTTAAG CGTG AGC TACG TAAATTCTATGAACC 42 347 SFV_RS05935 NONE SFV_RS05940 1118257 .. 1118267 + -5.4 -3.35597 TCGTCATGTGGCGTT CATC ATT GATG TGTTTGCCGGATACA 56 116 SFV_RS05945 1118781 .. 1118794 + -2.4 -2.94329 ATGCGAGCATGTAAA GGAT AGTTGC ATCC GTTTGCTTACGACTG 41 111 SFV_RS05950 NONE SFV_RS05955 1120396 .. 1120414 + -3.1 -3.19081 ACAGCAGTATCAGAC CACCC CTTTTGTTT GGGTG TGTATTGATTCAATG 45 282 SFV_RS05975 1123692 .. 1123718 + -10.9 -2.86618 AACAGAATAAATATC ATTGCCGGATG CGTGC CATCCGGCAAC ATTTCACTCTTACTT 75 31 SFV_RS06030 NONE SFV_RS06035 NONE SFV_RS06040 1133622 .. 1133638 + -13.7 -4.11692 ATTCGCCTCTTTCAG CGCCTGC CTT GCAGGCG TTTTGCCCGTGGGTC 100 145 SFV_RS06045 1135211 .. 1135237 + -14.4 -2.75074 ACGGTGTAACAATGC ATTCCGGCCTGC AGT GCAGGCCGGAGA TAATATTCAGATCGA 87 32 flgB NONE flgC NONE flgD 1138396 .. 1138407 + -2.2 -3.22113 CTTCACATTTCAGGA GTCA GTCA TGGC CTTTTCTCAAGCGGT 44 43 flgE NONE flgF 1140470 .. 1140483 + -2.3 -2.69433 GGGTGAGGGGAAATT CACAC TGTC GCGTG CTTCTGCTCTGCTTG 40 109 flgG 1141314 .. 1141332 + -8.1 -3.96337 AACTCTAAGGCATAA CCGGTGG CAGGT TCACCGG TTTACTGATTTTTGA 72 33 flgH NONE flgI NONE flgJ NONE flgK NONE flgL 1146822 .. 1146850 + -16 -5.54264 TGGGTATGTTTTGTC TGCCCGCTCTGG GATCG CCGGGGCGGGCA TTTTTTTGCCTATTT 100 67 SFV_RS06125 NONE SFV_RS06130 1152007 .. 1152037 + -3.3 -3.92075 GCCTCGCTTAGGTGA CGGAAATGGACGTC AAAA GGC-TCCACTTCTG TTTGTAGATGCCCAT 55 339 SFV_RS06140 NONE rpmF 1153321 .. 1153366 + -4.2 -4.07568 ACCGCGGCCGCAAGG TCATCGCTAAG--TAATCACGC GTCT GCGTGATGAAGCTTAGTGAGGA TTTTCCCCAGGCAAC 59 12 SFV_RS06150 1154493 .. 1154510 + -5.5 -3.57263 TGCGGTAGCAGGACG CTGCCAG CGAA CTCGCAG TTTGCAAGTGACGGT 59 33 SFV_RS06155 1155482 .. 1155492 + -2.4 -2.92267 CGGTGGATTCACTTG GGGC TCT GCGC TGGTTCGTTTCTAGG 41 1 SFV_RS06160 NONE fabG 1157373 .. 1157386 + -2.3 -4.25848 TACACTACGAAAACC ATCGC GAAA GCGAG TTTTGATAGGAAATT 57 200 SFV_RS06170 1157654 .. 1157680 + -13.1 -4.60808 GGCGTAAGTGAACAT CTCCAGGCGGTC GTTC GACCGCCTG-AG TTTATCTTTTTGTCC 100 34 SFV_RS06175 1158998 .. 1159013 + -8.2 -5.52096 TCCACCCATATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTAGCTTT 100 51 SFV_RS06180 NONE SFV_RS06185 NONE SFV_RS06190 NONE SFV_RS06195 NONE SFV_RS06200 1163430 .. 1163444 + -7.1 -2.80474 ACCGCCGAAAATTGG GCGGT GAATA ACCGC GTTTGAAATATTGTG 58 89 SFV_RS06205 1165119 .. 1165136 + -12.7 -5.04987 CGTTGGGGAGACTAA GGCAGCC AGAT GGCTGCC TTTTTTACAGGTGTT 100 50 SFV_RS06215 NONE SFV_RS06220 NONE SFV_RS06225 1169050 .. 1169061 + -2.2 -2.72144 GAAATTATCTGGTCA GGTA AAGG TGCC GTTTCGCAGCAATAA 40 58 thiK NONE SFV_RS06235 NONE SFV_RS06240 1171593 .. 1171605 + -7.7 -3.28712 ATCAATGCCTGATGC GATGC TGC GCATC TTATCAGGACGACCA 65 136 SFV_RS06245 1173261 .. 1173293 + -12 -2.60723 TGGTACGAGCGGTAG GCCTGATAAGACGC GTTAA GCGTCGCATCAGGC ATTCCTTCAGACTCC 79 92 SFV_RS06250 1173982 .. 1174010 + -12.4 -5.06103 TGTACTCTGCAATTT GGCCCCTCATTC GCTCA GGCTGAGGGGCC TTTTTTGCGACTTAT 100 47 SFV_RS06260 1175190 .. 1175216 + -18.8 -5.93809 CTACTGCTGATTTTT TCCCCGCGACAT GCC GTGTCGCGGGGA TTTTTTTTATCCAGG 100 64 SFV_RS06280 NONE lolD 1183139 .. 1183155 + -5.1 -2.98947 CTGATGGGGGCGGAG TAATGGC GAT GCCTTTA TCGTTATTGATTGGC 51 23 SFV_RS06290 NONE SFV_RS06295 1185327 .. 1185338 + -4.4 -2.5055 ATCTAACCGATTAAA CAAC AGAG GTTG CTATGTTGTCGCGTC 46 27 SFV_RS06300 1186287 .. 1186308 + -13 -2.52933 TTGCTAACTAAAAAA CGGGCGGT AATACC ACCGCCCG CTTGCTGAATTAACG 84 150 SFV_RS06330 1191613 .. 1191641 + -5.4 -3.06133 GGAAGTAAGCGAAAA G--GGATGCGGCAT GTG ATGCTGCATCCGGC TTAAATCCAAACTTA 52 33 SFV_RS06340 1194443 .. 1194465 + -10.7 -4.20368 AATAGCGAGAAAAAA GGCATGAAA CAATA TTTCATGCC TTTGTATTAACGTGA 88 215 SFV_RS06345 1194798 .. 1194808 + -6.8 -3.40073 GGCCTGGAAGGATAG CTGC AAG GCAG TTCATTAATCACGCT 61 7 SFV_RS06350 1195569 .. 1195597 + -7.4 -3.28712 AACACAAAAAGCAAA GCCCCG-CACTGT AGGA GCAGTAACGGGGC TTCTAACCAACAACG 63 271 SFV_RS06360 NONE SFV_RS06365 NONE SFV_RS06370 NONE SFV_RS06375 NONE SFV_RS06380 NONE SFV_RS06385 1198517 .. 1198529 + -3.3 -5.14894 CGCAATAACAACAGA CGAGT GCG ACGCG TTTTTATAATTTTTT 74 4 SFV_RS06390 NONE SFV_RS06395 1199602 .. 1199617 + -10.4 -5.49729 GAACCACACCACGCA GCCGGA GCAA TCCGGC TTTTTTTGCGTCATT 100 220 SFV_RS06400 1199965 .. 1199980 + -10.4 -5.54403 CATACAGCACATACA GCCGGA GCAA TCCGGC TTTTTGTTATTTTTT 100 46 SFV_RS06415 1202185 .. 1202214 + -9.3 -4.42386 CGACGATTAACAGCA TACAGAAGGGGCT AAAA AGCCCCTTTAGTG TTTTATGGGTGAAAA 85 31 SFV_RS06420 NONE SFV_RS06425 NONE SFV_RS06430 NONE SFV_RS06435 NONE SFV_RS06440 NONE SFV_RS06445 NONE SFV_RS06450 NONE SFV_RS06455 NONE SFV_RS06460 1207899 .. 1207915 + -6.6 -5.00616 TTTGTGCTTTCCGGA TGACGT GGCCA ACGTCA TTTTTTAGCGAAAAA 82 364 SFV_RS06505 1216440 .. 1216458 + -11.7 -4.60302 TGTTAAATATTTAAA CGGGCGT ATAAC ACGCCCG TTGTTTTATTTATGT 100 51 SFV_RS06520 NONE SFV_RS06525 1220355 .. 1220366 + -5.8 -2.77899 TTTTAATATTGTAGT CCTG CGCC CAGG TCATTGGTGCGAAAA 51 351 SFV_RS06545 1221705 .. 1221720 + -10.4 -4.54727 CCATCAACGATTAAA CTGCGC TTCG GCGCAG TTTTCGTTTACAGGA 89 41 SFV_RS06565 1224692 .. 1224704 + -4.1 -3.44051 ACCCAGCGCACTATG CGGAT GCC ATTCG TTATAATGCTCGAAC 52 114 SFV_RS06580 1226168 .. 1226182 + -11.4 -2.56046 CGTTAACGTCTATGA CGGGGA TAG TCCCCG TCGGTTGACATTTAC 77 107 SFV_RS06590 NONE SFV_RS06595 1227951 .. 1227963 + -3.3 -5.00616 CTGCGTTCGGTAAAA TCCCG GCG CGGCA TTTTTTGCCGGGGGG 72 269 SFV_RS06610 1228399 .. 1228429 + -2.4 -4.34402 ACAAATAACCGATAT CCGGCGGTGGCA TTATCTT TGTCGGCGCGGG TTTTCATATCCACGA 59 33 SFV_RS06615 1229126 .. 1229154 + -8.9 -3.09015 CGCGTTTTGTAATAC TTTTTGCCGCC AGAAAGC GGCGGCAAAAC TTGCATCGCTGTGCC 68 29 SFV_RS06620 1229752 .. 1229792 + -4.1 -2.60615 AGCGCTCTGTCATAA TGAGAGTTACCCGAT ACCTTATTATC AACAGGTAACTCTCA ATCTTTAAAAAACGT 44 117 SFV_RS06635 NONE SFV_RS06640 NONE SFV_RS06655 1236053 .. 1236068 + -10.4 -5.80727 CGTTTAAAGAGCAAC CCCCTC AAAC GAGGGG TTTTTTGTTGTTTTT 100 48 SFV_RS06665 NONE SFV_RS06670 1240429 .. 1240455 + -12.5 -3.53224 AGCCATTGCCCATGA TAGTGTCCATT AAAAG AATGGACACTA TTTCCCCGGAACCTG 93 132 emtA 1245979 .. 1245993 + -5.6 -4.58283 CGATGTAAATCAGTC GCGCAC TTT GTCCGC TTTTTCCCGGGCTTC 72 33 SFV_RS06700 1247175 .. 1247204 + -12.9 -3.59979 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG 100 38 SFV_RS06735 1254556 .. 1254571 + -4.7 -2.78596 GGCACCTCCAGCACG CAGTG AGGATA CACTG TATCATCAGCGAATC 47 205 SFV_RS06740 1255146 .. 1255203 + -10.6 -2.74563 AAAACCATAGATATG GTGTTATCTGCCGACAACGCCATCCGG AGAAG CCGAATGACGTTGTCGG-AGTAAGCGC TGGTTAAGGTGTGGG 74 43 SFV_RS06765 1262539 .. 1262550 + -4.4 -3.54146 CGATTTCTGATACAT CAGA GTGA TCTG TATTTCATTCCGGCG 54 51 SFV_RS06775 1266246 .. 1266263 + -11.3 -4.6709 CGGTGAAATGAAAAA TCCACGC AATT GCGTGGA TTTTATATACTTTTG 100 243 SFV_RS06790 1268689 .. 1268718 + -11.5 -2.87963 AAATAATGCAGTTTG CTGACCAGTCAGT TTGC GCTGACTGGTCAA TCTCGTACTTATAAA 78 42 hemA NONE prfA NONE SFV_RS06825 NONE SFV_RS06830 NONE SFV_RS06835 1277708 .. 1277724 + -3 -2.61216 AATAAATAACATCGC GCATAA ACATA TTGTGC TGCATTAATTAATCG 40 1 SFV_RS06840 1278987 .. 1279012 + -16.3 -3.90762 TCAACGTGCGGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG 100 390 chaB 1282863 .. 1282879 + -5.2 -3.18735 AAATCGTAAAACCGG TAGCTT AGTTA AAGCTA TTCGTGCGGTGTTGC 52 32 SFV_RS06870 1284167 .. 1284184 + -4.1 -4.66264 ACTGCTTCTGCAGCG TCTGACC AATC GGTCACA TTTTTAAGGATTTTC 69 483 SFV_RS06880 1285757 .. 1285771 + -2.8 -4.40894 CATTTTCTTCAGCAT GTGC TTGACGT GCAC TTTTACTGTGCTTTC 62 98 SFV_RS06895 1288389 .. 1288404 + -4.8 -3.29324 AAAGTTATCTTATCG TTTGAT TTAC ATCAAA TTGCCTTTAGCTCCA 54 46 SFV_RS06900 1289878 .. 1289896 + -16 -5.64274 ATTTGATTATCCTTT GCGCGGCA TGA TGCCGCGC TTTTTTTATGCGTCA 100 49 narZ NONE narH NONE SFV_RS06915 NONE narI 1296931 .. 1296946 + -8.2 -5.60993 TTTAGTTCACATAGA CCCTGC TTCG GCGGGG TTTTTTTATGGGCAC 100 47 SFV_RS24450 1297312 .. 1297328 + -7.3 -2.64472 TCGAAGTCGATGACG GCAGATT TAC AGTCTGC TCCCTTTGGCCGCTC 52 126 SFV_RS06940 1299862 .. 1299877 + -7.6 -2.7264 GGACGAACTTTTGCC GTTGGT ACGC ACCAAC ATTTGACCAGAATTT 58 4 SFV_RS06945 1301105 .. 1301125 + -4 -2.79796 CCTCCTTTTCAGAAC TTAGC-CCC TTCG GGGTGCTGA TATACTGGGATGCGA 45 142 SFV_RS06950 1302125 .. 1302146 + -12.3 -5.66684 GTGTTATCCACGAAA CGGCGTTGA GCAA TCGACGCCG TTTTTTTATAGCTTA 100 52 SFV_RS06960 1304154 .. 1304179 + -11.9 -3.90762 CCCAGAAGGGGTAAT GCCTGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGAGCTG 93 302 SFV_RS06975 1309433 .. 1309450 + -8.4 -3.98113 TCCTTTCAAATGAAA CGGAGC TGCCAT GCTCCG TTTACTTCGTCATTA 76 42 SFV_RS06980 1311787 .. 1311825 + -13.3 -3.32317 TTGTGAAGCACTAAT GGCAATACGTGGGGCAGGA GTG TCCTGCTCCACG-G-TGCC TGATTTTTATCGCAT 95 27 oppB NONE SFV_RS06990 NONE oppD NONE SFV_RS07000 1315750 .. 1315769 + -13.6 -4.59773 CTTTAAAAACAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCTAAAA 100 35 SFV_RS07015 1317931 .. 1317969 + -9.7 -2.50438 GCGATCTACAATATC TAAATGTACTGGGCACC ATTGC GGTGCCCAATAAGTTTA CTCTTCCGTCTTTAA 68 23 SFV_RS07025 NONE SFV_RS07030 1321062 .. 1321078 + -5.1 -3.04461 CGGAAAGGCGTTTTT CGAGGCT ATC AGCTTTG TCTTGAGCGTAAATA 50 327 SFV_RS07040 1322065 .. 1322098 + -16.9 -3.14564 AATTCAGTAAGCAGA AAGTCAAAAGCCTCC GACC GGAGGCTTTTGACTA TTACTCAACAGGTAA 100 31 SFV_RS07060 1325307 .. 1325323 + -2.2 -5.00138 GATCAAGAATAGTTT CCAGTT GAACA ATCTGG TTTTTGGTTTCACTA 71 423 SFV_RS07105 NONE SFV_RS07110 1335003 .. 1335020 + -9.1 -3.49851 TACGCGGCTTTAAAA TGGCGCT ATAC GGCGCCA TTGATTCTCCTGTTC 73 59 SFV_RS07115 1335951 .. 1335971 + -8.3 -4.62872 CGGTTAATCAAAGTA TGCCGGA CGTCATA TCCGGCA TTTTTACAGATTAAT 89 34 SFV_RS07135 1338605 .. 1338624 + -10.7 -4.58773 GATGTAAAAGACAAA CGCGAGG CTAAAA CCTCGCG TTTTGCTTTAATCAA 93 34 SFV_RS07145 1339119 .. 1339130 + -4.4 -3.14848 CCAAGACCTGTTAAC TCAG TCAC CTGA ATTTTCGTGAACAGA 50 4 SFV_RS07150 1341892 .. 1341909 + -10.5 -5.49234 GTTTTTATAAACAAA GGGTCGC GAAA GCGGCCC TTTTTTATTGCATAT 100 57 cysB 1343058 .. 1343091 + -9.7 -3.35613 AATTTCTTGCGTTAT TTTCGGCACCTTT TATGTAGC GAAGGTGCCGGAA TATATTCTCTTTTGT 74 39 SFV_RS07160 NONE SFV_RS07165 1343891 .. 1343906 + -11.8 -3.66643 CTCACTGATCCTTGA CCCCGC TGCG GCGGGG TTGTCATTTGCTTTG 89 242 SFV_RS07180 1346729 .. 1346763 + -11.6 -2.52896 TTGAAGTAACAAGTA TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA TGAATTACACGATGC 77 32 SFV_RS07190 1348365 .. 1348390 + -4.1 -2.90813 CAATGCGCGTGGATG CCATTT-CGC AGACGGC GCGAAAATGG TACTTTAAAGGGCTA 46 80 SFV_RS07195 1348758 .. 1348772 + -2.1 -2.81738 GCACTCGTCAGCGGC GAAGG AATAA CTTTC TATGCTGGAGTTGTT 40 16 SFV_RS07200 1349926 .. 1349938 + -2.6 -3.18031 ATTAAACCGATTCGC GGTC TTGAT GGCC TGTAATTTTTAAAAA 45 8 SFV_RS07205 NONE SFV_RS07210 1351208 .. 1351227 + -13.6 -3.71687 CGGTTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAATATTTTAC 100 34 SFV_RS07245 1355432 .. 1355443 + -7.2 -4.32857 CGCCGCGAAACGGGT GCCG GTCC CGGC TTTATCTTTCAGGAA 75 355 puuD NONE SFV_RS07325 NONE SFV_RS07330 NONE SFV_RS07335 NONE SFV_RS07340 1375111 .. 1375125 + -8.6 -4.77438 CCCCTGTTGCAAACT GAGTTG CAG CAACTC TTTTTCCTGCTGCAT 93 244 SFV_RS07350 NONE pspB 1377094 .. 1377110 + -2.1 -2.5655 CATCCGAACTGGAGG GATCGCT AAT GGCGGGC ATTAATCTCAATAAA 39 17 SFV_RS07360 1377446 .. 1377466 + -3.4 -2.62463 CACGTTACGTAGCCG TTTCCGTCA ACTG TGA-GGAAA GTTATGAATACTCGC 42 10 SFV_RS07365 NONE SFV_RS07370 1378098 .. 1378113 + -11.8 -6.02914 AGAATTCACCATGAG CGGCGC TTAT GCGCCG TTTTTTTTCTGTCAC 100 42 SFV_RS07375 NONE SFV_RS07380 NONE SFV_RS07385 NONE SFV_RS07390 NONE SFV_RS07395 NONE SFV_RS07400 NONE SFV_RS07405 NONE SFV_RS07410 1383788 .. 1383800 + -2.7 -3.10597 GCTAAAGCGGCCAGT TTCTT TAC AAGGA GTTTTACATGAAAAA 43 36 SFV_RS07415 NONE SFV_RS07420 NONE SFV_RS07425 NONE SFV_RS07430 NONE SFV_RS07435 NONE SFV_RS07440 NONE SFV_RS07445 1391824 .. 1391835 + -2.2 -4.09739 GGCAACGGTAATATT CTGT GGTG ACGG TTTTCCCGAAATTAA 56 247 SFV_RS07460 NONE SFV_RS07465 1395403 .. 1395422 + -5 -3.34517 CGAAAAATAATGCAA TATCGGGT GCTG ACCGGATA TCTTTACGCCGAAGT 54 31 SFV_RS07470 1397089 .. 1397129 + -18.5 -3.61609 GAACGAAGAGTAAGC GCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAAC TTATGCTTTCAGTAC 100 28 SFV_RS07480 1398995 .. 1399029 + -8.4 -2.94365 AATGCGGTGTATAAG CTGGCACAGCGCCTGG GTT TCAGGTTCGGAGCCAG GTTTGTCACCTGTCA 61 300 SFV_RS07500 1402666 .. 1402681 + -4.8 -3.73224 AATCGCCGGATACTG TTTTGA CTCA TCAAAA TTTGGTGGAAACTGA 58 315 SFV_RS07515 1404399 .. 1404418 + -4.2 -3.62046 TGTATTCCCGTATTA CTGAGATG GCTT CATCCCGG TTATTAAAACGATAG 53 174 SFV_RS07530 1405729 .. 1405742 + -2.4 -2.75844 AACGAGCGATGGGTT GATG TTGAAC CATC CTTTGAAGTGGCACA 40 5 SFV_RS07535 NONE SFV_RS07540 1407316 .. 1407328 + -4.1 -3.44051 ACCCAGCGCACTATG CGGAT GCC ATTCG TTATAATGCTCGAAC 52 354 SFV_RS07555 NONE SFV_RS07560 NONE SFV_RS07565 NONE SFV_RS07570 NONE SFV_RS07575 NONE SFV_RS07580 NONE SFV_RS07585 NONE SFV_RS24460 1412675 .. 1412695 + -11.1 -4.56597 GTTAACAAACAAAAA CCCCGGATT GAT GGTCCGGGG TTTTTGAAGGAAACA 93 116 SFV_RS07600 1413265 .. 1413278 + -9.5 -5.4833 CGCACCCGCACTAAA CCCGC TTCG GCGGG TTTTTTGTTGCGTGC 100 96 SFV_RS07605 NONE SFV_RS07620 NONE SFV_RS07625 NONE SFV_RS07630 1416051 .. 1416065 + -8.5 -5.64274 GGACACTTGAAAGAA CCCGC TTTAT GCGGG TTTTTTTGTGCCTGA 100 105 SFV_RS07635 NONE SFV_RS07640 1416308 .. 1416323 + -4.6 -3.05384 TTCGAGTCCTCGGTG GTGGGC CAGC GCCGAC TTAGCTCAGCAGGCA 49 18 SFV_RS07645 NONE SFV_RS07650 1416517 .. 1416527 + -6.8 -2.72379 AATCCTAAGGGATAC GGCT TTA AGCC TCCTTGCAGAGTTAC 55 71 SFV_RS07655 1418222 .. 1418239 + -2 -4.68994 GGATGACACTTACTA CA-GACC TGTGT GGTCATG TTTTTGACTCATAGT 64 57 SFV_RS07660 NONE SFV_RS07665 NONE SFV_RS07670 NONE SFV_RS07675 NONE SFV_RS07680 1421960 .. 1421978 + -7.4 -4.13995 TGAATGGCCCGCCTC TCCGGAAG GTT CTTCCTGA TTTAATTTATCGCGA 72 7 SFV_RS07685 NONE SFV_RS07690 1423851 .. 1423883 + -10.6 -3.10012 GTGGAATAACAGAAG CTGCGGCACG-TCGT ATGC AGGAACGTGCCGCGG TTGGCTGGTAAACTT 76 32 SFV_RS07720 NONE SFV_RS07725 NONE SFV_RS07730 NONE SFV_RS07735 NONE SFV_RS07740 1432372 .. 1432382 + -5.4 -2.57463 CTGTAAAATAATCCT TACG CTA CGTA CTTCTCGGGGCGCTT 50 30 SFV_RS07745 NONE SFV_RS07750 NONE SFV_RS07755 1433746 .. 1433768 + -6.2 -3.84825 CACGGCTTCTGACCA TGGCTTCGGC AGT GCGGAGGTCA TTTGCTGTCACTCCC 63 343 SFV_RS07765 NONE SFV_RS07770 NONE SFV_RS07775 1437560 .. 1437574 + -2.8 -3.29144 TGGCAAAAGGACGTT GATTTG CAT CAGGTC TTGTGGAGCCGCTCG 46 93 SFV_RS07780 1438017 .. 1438033 + -5 -4.44608 AACCAGGACAAATAA CCCGCC ATGCC GACGGG TTCTTTTTGGATCAG 71 318 SFV_RS07810 1444458 .. 1444477 + -6.4 -3.1552 GTAGCATTTACTGGT AGCGTCAT TATA ATGACGCC TGTTCATGCCTGCGC 57 53 SFV_RS07815 NONE SFV_RS07820 1447300 .. 1447323 + -14 -5.00616 GTCAAGTAATATCAA TCAGGCACAA GAAA TTGTGCCTGA TTTTTTAACAGCGGC 100 32 SFV_RS07825 1448387 .. 1448406 + -10.7 -5.626 AGTAAATACTAAAAA GCGCGTC CTGATC GACGCGC TTTTTTTATGCCCTG 100 46 SFV_RS07835 1450763 .. 1450793 + -6.9 -4.44046 TTCTGATGAGAGTAA GAACCTGTCGG AATATCAAA CAGACAGGTTC TTTATTTAGCATGAG 74 35 SFV_RS07845 1451425 .. 1451439 + -2.8 -3.37655 TGCCATTAACCAGTT TATCCC GTG GTGATA TCATTTTTTCAGCAC 46 13 SFV_RS07850 1451813 .. 1451844 + -9.6 -3.25729 AATCCTTCCTCAATC TTGAGTAACCCCGTC GTT GAAGG-GTTACTCAA TTCATCCTGATTATA 72 39 SFV_RS07860 NONE SFV_RS07865 1452883 .. 1452901 + -8.1 -4.85177 CAATCTCGCTATAAA GCCTCGT CGAAT GCGAGGC TTTTTACTATGCTTT 86 74 rrmA 1454062 .. 1454078 + -11.5 -2.55437 ACCAGTAGCCAGAAA CCGTGCC GAC GGCGCGG CTCTTCATCTTCATC 73 278 SFV_RS07915 NONE SFV_RS07920 1460844 .. 1460878 + -14.9 -3.54424 GTGATATGTCCATTA TGCCGGGCGGGCGGC GGTTG GCTGCCCGCCAGCCA TTTGGGAAAATCACG 100 66 SFV_RS07945 1466584 .. 1466602 + -3.2 -3.17723 GCGGGTACTCCCAGT TCTTTTAA ATA TTTAAAGA TTCCCTTCGCCGTGC 45 329 SFV_RS07960 NONE SFV_RS07965 NONE SFV_RS07970 1470897 .. 1470921 + -14.4 -2.66106 GTTTTTAAAGAAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTCTTACGGTA 87 47 SFV_RS07975 1472786 .. 1472802 + -10.8 -5.75342 AAGTCAGTCGTCAGA CGCCGG TTAAT CCGGCG TTTTTTTTGACGCCC 100 46 SFV_RS07980 1473974 .. 1474006 + -12.1 -3.54424 GTAAAATCTTCCGAA GCCGGACTG-GGCGC GCTCA GCGCCACA-TCCGGC TTTGGCAAACTACAA 88 37 SFV_RS07995 NONE SFV_RS08000 1477088 .. 1477109 + -3.8 -3.53012 GCTGCATTAATGATT TCAGTCGCT CAGCA AGCGA-TGA TTTACCCCCACCCAC 51 288 SFV_RS08015 NONE SFV_RS08020 1478264 .. 1478274 + -3.2 -2.56728 TGGAGTCATTACCCA GGTT AAG AGCC GTTCATATGAATAGT 42 43 SFV_RS08025 1479452 .. 1479468 + -13.7 -4.2803 TTTTGTGCATAAAAA CAGGGCG TCA CGCCCTG TTTTGCATTACGGTG 100 61 SFV_RS08030 1480342 .. 1480358 + -2.2 -3.21419 GGCAACGCGAATGGA TTGCGC CAGAT GTGCAG GTTTCTCTTTGGTGA 44 100 SFV_RS08045 NONE SFV_RS08050 1483630 .. 1483644 + -2.8 -3.93038 AAATGCAGGTCATTA TCTGTG TTG TGCAGA TTTAATATTGACCTC 54 304 SFV_RS08055 NONE SFV_RS08060 1486043 .. 1486053 + -3.2 -3.46602 TATGCCGTTGCAGTG CTGC TCA GTAG TTATGGTGTAACGGG 50 15 SFV_RS08065 NONE SFV_RS08070 NONE SFV_RS08075 NONE SFV_RS08080 1490137 .. 1490156 + -2.2 -2.85351 GAAAGTAAACATCGG TTA-TGCGA TAA TCGCGCTAA TGTGATGTAAAAAGA 41 112 SFV_RS08085 1491007 .. 1491028 + -10.9 -2.56591 AAATGATGATAAAGA TGCGGCAAG TGAA TTTGCCGCA ATTGCTACCTTTTAT 74 87 SFV_RS08090 1491610 .. 1491621 + -3 -3.0873 TGTTTCTTCTGGGTG GTAT TGGC ATAC TGTTAGCCTAGTTTC 43 3 SFV_RS08095 NONE SFV_RS08100 NONE SFV_RS08105 1493408 .. 1493423 + -3.3 -3.33671 GCCACGACAGCCATC GGTAA TCACGT TTACC TTATAACCTAACTGT 47 235 SFV_RS08130 NONE SFV_RS08135 NONE SFV_RS08140 NONE SFV_RS08145 1500861 .. 1500891 + -7 -5.81412 AGTCATATTCTGAAA TATCCAGCGGAT CAAGAAA ATTCGTTGGATA TTTTTTTTGCATGGA 100 66 SFV_RS08150 1501605 .. 1501621 + -2.3 -3.10715 TTTGCTGTTTTTCCC TCAGA CTATATC TCTGA TTGGGTAATGCTGCC 42 8 SFV_RS08155 NONE SFV_RS08160 NONE SFV_RS08165 1502847 .. 1502872 + -8.3 -2.7644 TGTGCCCATCTGTAG GCCTGATAAGCG TAG CGCC-ATCAGGC ATTTACAACTTAAAT 64 107 SFV_RS08175 1504964 .. 1504976 + -4.7 -3.73775 AACTCACGCACCAGC GCCTG CTG CTGGC TTTCATCCAGCTCGA 58 256 SFV_RS08185 1505786 .. 1505801 + -4.6 -5.0133 GCCCGGGCCGCGTTC ACCGGT TGCA ACCGGA TTTTTTGGAGCGCTG 79 61 SFV_RS08215 1511489 .. 1511514 + -16.3 -2.71785 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCTTTTAAGG 100 9 SFV_RS08250 NONE SFV_RS08255 NONE astD NONE SFV_RS08265 NONE SFV_RS08270 1521958 .. 1521983 + -16.3 -3.2827 AAATAAGCTAATACT TACCCGCAGAA ATCA TTCTGCGGGTA TTAAGTTGCTTTCTT 100 30 SFV_RS08275 1522792 .. 1522842 + -19.8 -5.26907 CCAAAAAACTTAAGA CCGCCGGTCTTGTCCACTACCTTG CAG TAATGCGGTGGACAGGATCGGCGG TTTTCTTTTCTCTTC 100 49 SFV_RS08280 1523776 .. 1523790 + -5.6 -3.22774 CTCCAGAGACTGGCG CAAGCG TAG CGCATG TTCCTCATGGCTCTC 52 255 SFV_RS08290 1524709 .. 1524724 + -3.2 -3.4398 TCTCTATTGTTCTGG CGACCT GTTC AGGTAG GTTTTTCCCTTCCAG 49 122 SFV_RS08300 1526025 .. 1526040 + -7.5 -5.78622 GAGTAACAACGGAAA CCGGC CATTGC GCCGG TTTTTTTTGGCCTGA 100 60 SFV_RS08305 1526655 .. 1526674 + -4.3 -4.62904 TTTCATAAATCAATA CCGTAAT ATTTAA ATTGCGG TTTTTAAGGGTATTT 71 71 SFV_RS08310 1528057 .. 1528067 + -2.4 -2.74523 GAAATTTTAATCGAT GCCG GTA CGGG TAATCTTGCCGGTAA 40 39 SFV_RS08315 NONE SFV_RS08320 1529332 .. 1529344 + -3.3 -4.14627 CAATTCACATATCTG TCCTG TTG CTGGA TTATTTATGTCCGGG 57 55 SFV_RS08325 NONE SFV_RS08330 1531537 .. 1531573 + -14 -3.34517 GATGTGTAAGTAAGG TGG-TAAGGTCAC-TCCC CAG GGGACGTGACCTTATCCA TATTTACGCCGGAAT 100 32 SFV_RS08340 1534312 .. 1534331 + -2.2 -2.71693 TCCCGGTTTTGCCGG GAGTTACAG GAC CTG-AATTC TGCATTTCGTTGCTA 40 53 SFV_RS08345 1535729 .. 1535739 + -8.2 -3.30619 TTGCCGGATACAAAC CGGC GCA GCCG TTCTGACCAATGGTT 65 378 SFV_RS08365 1539014 .. 1539030 + -10.8 -2.64099 TTTATTTAATCAAAA GGCCGC ACGGA GCGGCC ATTATCCTCAACCCA 74 32 SFV_RS08385 1542388 .. 1542412 + -12.1 -3.25317 CATGTAAAATTATCT GCCGGACCGTG TTA TGCGGTCTGGC TGTCTTCGTTTGTCA 83 34 thrS NONE SFV_RS08415 1547513 .. 1547542 + -9.3 -3.72593 GCCTTCAAGTAGCAC TATCTGTGGAGCC TTTG GGCTTCACAGGCA TTGTTCGCCTTTGTT 77 42 SFV_RS08420 1547794 .. 1547808 + -2.9 -4.87291 CCGTACGCATAAGCC GTTAA CGTTT TTAAC TTTTTAATTAGAATA 68 29 rplT 1548416 .. 1548431 + -10.4 -5.71712 AAACAGCGCCTGAAA GCCTCC CAGT GGAGGC TTTTTTTGTATGCGC 100 242 SFV_RS08430 NONE SFV_RS08435 NONE pheT NONE ihfA 1552356 .. 1552370 + -12.8 -5.80951 TGATCTAACTAAAAA GGCCGC TAT GCGGCC TTTTTTCTTTTCACT 100 43 SFV_RS08450 NONE btuE NONE SFV_RS08460 1554795 .. 1554807 + -9.1 -2.71364 TGATTTCATTAGTAT CCCGA AAA TCGGG TAATTACGACGCTAA 66 38 SFV_RS08465 1555337 .. 1555363 + -19.6 -3.79747 TAGTATGTCGAAAAA TTGACGGCGATG ATA CATCGCCGTCAA TTTACTCCTGAATAC 100 38 SFV_RS08475 1557776 .. 1557796 + -6.1 -4.63932 CTACACTATCAAACA GATAGGATC TAT GACCCTGTC TTTTATTACCCGCTG 78 79 SFV_RS08480 1559305 .. 1559332 + -7 -2.71364 TCGATAATCAGTTTG CCATCCGGAC-CT AAC AGTGTCTGGCTGG TAATTCGCCGGATGG 53 108 SFV_RS08500 1561867 .. 1561878 + -2.2 -3.86822 ATGCAAAGATAAATG CGCA GAAA TGTG TTTCTCAAACCGTTC 53 29 SFV_RS08505 1564303 .. 1564327 + -16.4 -3.54475 AGAAATAAAATAAAT CCCCGGCGGC GTTCA GTCGCCGGGG TTATGTGATCCCCGA 100 33 SFV_RS08535 1569669 .. 1569701 + -6.3 -4.90869 GCGGTTGTATAACCG CAATACACGCCGTAT TTT ATCCGGCATATATTG TTTTTGCTTGCTCAT 81 63 SFV_RS08540 NONE SFV_RS08545 1571407 .. 1571420 + -3.1 -4.34285 CAAGTGCATAAATAT GTGAT GGAT GTCAC TTATTTATTTCAATA 62 467 SFV_RS08575 NONE SFV_RS08580 NONE SFV_RS08585 1578065 .. 1578087 + -7.7 -2.81464 GACAACAATAAAAAA GCCACCAGT TAACT ACTGATGGC TCTGATAACTCATGC 60 271 SFV_RS08600 1579201 .. 1579215 + -8.5 -2.54896 TGCCATTCCATGGTG CCGGG TGCAT CCCGG TGAATTCAGTACCAG 63 112 SFV_RS08675 1586820 .. 1586843 + -9.6 -5.16841 TCTGTAAACCCTCAA TCCCTTCTCT TACC GGAGAGGGGA TTTTTATTCATATAA 93 34 SFV_RS08680 1588468 .. 1588478 + -6.8 -3.73224 AACAACTACGGTTTT TCCG CGG CGGA TTTGCTCAGCGGTCA 66 133 SFV_RS08700 1592492 .. 1592521 + -19.3 -2.83271 ATAAACACCACCAAT GGCTGGCCTGGAG ATAT CGCCAGGCCAGCC TGGTTATAGCAGTAA 100 37 SFV_RS08710 1593655 .. 1593666 + -2.2 -3.63515 AGTTCAAAGCCGAAG CTGT CAGA ACGG TTCTTGAAAATCAAC 49 137 SFV_RS08715 NONE SFV_RS08720 NONE SFV_RS08725 1595190 .. 1595212 + -12 -3.47383 TGATTAACTAACTAT GGTCTGGACC AAT GGTCTGGACC TGTTGTTAATATAAT 88 38 SFV_RS08745 1598654 .. 1598676 + -8.4 -2.89565 ACGGGTTGCCAGACC TTTCCCCTGA TAC TCCGGGGAGA TAATTATCTGAAATT 61 298 SFV_RS08760 1599868 .. 1599881 + -2.3 -3.99153 TGTCAACCATTCACA GCGCA AATA TACGC CTTTTTTTGTGATCA 53 112 SFV_RS08765 1601236 .. 1601249 + -2.3 -2.76969 GCCACGGGTTTAACA GACAC CTCA GAGTC ATTTAAGATGGCTTA 40 60 SFV_RS08770 1601587 .. 1601604 + -4 -2.90212 GTGACAACTCCTGTT GCTGGC CTGTTC GCCTGC TCTGTCGGGTGCTGG 46 56 SFV_RS08790 NONE SFV_RS08795 1607068 .. 1607078 + -6.8 -3.09803 TAAAAAACGGGAGGC CGCA TAA TGCG TATTCGCTACGGTTG 58 19 SFV_RS08800 1608059 .. 1608083 + -2.1 -2.54732 GGGCCAATAACCCAT TGCCATAAAGG ATA TCTTCATGACA CTTCATCGCTTTAAG 39 18 SFV_RS08805 1609257 .. 1609276 + -8 -2.5076 TCTCCAGACAACCAG TATCACTT AAAT AAGTGATA GTCTTAATACTAGTT 59 181 SFV_RS08810 NONE SFV_RS08815 NONE SFV_RS08820 NONE SFV_RS08825 NONE SFV_RS08830 1612513 .. 1612531 + -2.4 -3.66874 ATTTCTGCTTCATCG TTCATCTG TAA CAGGTCAA TTTCAATAGCGTTGC 49 87 SFV_RS08840 NONE SFV_RS08845 NONE SFV_RS08850 1615102 .. 1615116 + -2.1 -3.48629 GGCATAAGGCGTGGA CAG-CG GTAT CGTCTG GTTTTTCAATTTCCT 47 439 SFV_RS08880 NONE SFV_RS08885 NONE SFV_RS08890 NONE SFV_RS08895 1624034 .. 1624047 + -9.5 -5.1861 ACGCAATAGTTGAAA GGCCC ATTC GGGCC TTTTTTAATGGTACG 100 32 SFV_RS08905 NONE SFV_RS08910 NONE SFV_RS08915 1626026 .. 1626043 + -12.7 -3.73068 ATGTAGTTTGTTCTG GCCCCGA CATC TCGGGGC TTATTAACTTCCCAC 100 35 SFV_RS08925 1628304 .. 1628320 + -5.7 -4.40298 GATTCGTGCAAGACC GTGGGGG CAG CCCGCGC TTTGTTGATTTAAGT 70 1 SFV_RS08930 1628576 .. 1628610 + -13.7 -3.49419 TAATCCCTCACCTAA CCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTG ATTTTTATGACGGCG 100 51 SFV_RS08950 NONE SFV_RS08955 NONE SFV_RS08960 NONE SFV_RS08965 1632927 .. 1632941 + -3.6 -3.4252 TCGCCTATAGTTGAG TAATCA GTA TGGTTA TTATCATCAGTAAGC 51 267 SFV_RS08975 NONE SFV_RS08980 NONE SFV_RS08985 NONE SFV_RS08990 1638208 .. 1638225 + -12.7 -2.76315 CAGGTTAACAAATTG GTGCGGG GCAA CCCGCAC ATTTCAGGATGTTAG 82 33 SFV_RS08995 1638911 .. 1638925 + -4.2 -5.80248 GATTCGGCAATAATA CGTTAC AAT GTCACG TTTTTTTATCTCTTA 100 79 SFV_RS09000 1640699 .. 1640712 + -3.1 -4.4846 ATTGATTGGGCAACT GT-GCG CCA CGCTAC TTTCTTCTTCGCTTA 65 416 SFV_RS09020 1644703 .. 1644738 + -12.1 -3.09516 TGCACGCCTGAAAAA TAAGTCCGGACTGCGGT AAAT ACC-C-GTCCGGACTTA TTGCCTGCTCAAACC 81 30 SFV_RS09025 1645475 .. 1645505 + -11.9 -2.71924 TCGCGCCTGAAAATT ACGGTGCTAAGCG GGTAA CGTTTAGCACCGC CTTTAGCGGAGGGTA 79 70 SFV_RS09030 NONE SFV_RS09035 1646536 .. 1646559 + -15.3 -3.13403 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TCTTCATCAGGCAAG 100 34 tqsA 1648821 .. 1648833 + -4.1 -3.53811 CACCAGCATAGCCAG TGTTC ATC GAACG TTTAAAGACAATCAC 51 154 SFV_RS09065 1653137 .. 1653153 + -10.8 -3.81062 CAGTTACTCCTATAA GGCGGC TTGAT GCCGCC TTTCGCATTTTTAGT 85 46 SFV_RS09070 1654677 .. 1654695 + -6 -2.75064 CGACCTGGATGCTGG TGGGATAA CGT TCATCCCA TCGTTGGATAGCAAA 53 18 SFV_RS09075 1655420 .. 1655435 + -5.4 -2.56715 CGCAGTTTCCCACTT GATGGC GGTC GTCATC TGCGTTAATGCAGCT 50 2 SFV_RS09085 1656738 .. 1656752 + -7.2 -2.80113 ATTTGATATGAAAAT GAGAAA AAA TTTCTC TATAATCGCCTCGTC 58 116 SFV_RS09090 1658263 .. 1658275 + -5.5 -2.79273 ACCGGGGATACATCC GTCTG TTC CGGAC ATTATCTTCCAAACA 50 97 SFV_RS09095 1659727 .. 1659741 + -3.6 -2.53119 AAAATAAGTATGTTG TAACTA AAG TGGTTA ATATTATGGCGCGTT 42 81 SFV_RS09100 1661120 .. 1661135 + -5.4 -4.11484 TTTCCCCGGCATGAT TGAGCT GCCC GGCTCA TTTTCCGGGATTGAG 65 469 SFV_RS09115 1665297 .. 1665317 + -12.6 -4.27483 AGGCTTATAACACCT TCAGGCGG CCAGT CCGCCTGA TTTCATTTTATGGAT 100 83 SFV_RS09120 1667043 .. 1667066 + -11.7 -4.27694 GTCAACAATCTGAAA CGCCGGAGG TTTTTC TCTCCGGCG TTATTTCTTACTTCA 95 220 SFV_RS09160 NONE SFV_RS09165 1678400 .. 1678441 + -8.7 -4.652 CCGCGCTGTTCGCTA ACCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGGA TTTTTACCCTGCTTT 89 25 SFV_RS09170 1679512 .. 1679536 + -17.3 -4.56597 GCGAAGTAACAAAAA TGGATGGTGCA AAT TGCACCATCCA TTTTTCACGCAAGGC 100 32 SFV_RS09180 1680904 .. 1680926 + -6.3 -4.3208 GCACTTGTGGAGCGA CATGCTGCCC GTCC GGGT-GCATG TTTTCACTTGTCGGA 73 46 SFV_RS09185 NONE SFV_RS09190 NONE SFV_RS09195 NONE SFV_RS09200 NONE SFV_RS09205 NONE rnfD NONE SFV_RS09215 NONE SFV_RS09220 NONE SFV_RS09225 1688372 .. 1688391 + -7.9 -2.52234 GACATCTGAAGAAAA GGGGTAA CACCGA TTACCCC ATTGATAACCTTTCT 59 32 SFV_RS09230 1688758 .. 1688768 + -2.6 -3.57792 AATCTGCCGTTACGT TTTT TGA AAAA TTTAACGCTGGATAA 50 90 tppB 1690502 .. 1690524 + -13.5 -6.09888 GAAACTCTTTTACAA GCCGCTAAC TTTTC GTTAGCGGC TTTTTTTTGTTCAGC 100 49 SFV_RS09240 1691196 .. 1691209 + -5.9 -3.28924 TAAAGTAATAGCCAT CGGCC CACA GGTCG TTGTGGGCCGAAATG 56 33 SFV_RS09280 1697890 .. 1697925 + -11.8 -3.5332 CTCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT 88 30 SFV_RS09290 NONE SFV_RS09295 NONE SFV_RS09300 1701924 .. 1701951 + -11.2 -3.69902 TTTGTGGATCAAGAT GCCCGC-CTGCGG ATT CCGCGGCGCTGGC TTTGCCATCTTTGGT 81 274 SFV_RS09320 1704151 .. 1704170 + -4.9 -5.24129 AAAACATTATTGCGA CGCCTGC CGTTTA GCAGGCA TTTTTTATCACCAGA 82 12 SFV_RS09325 1705312 .. 1705329 + -9.8 -2.78384 AATCCAACATTGCGA GCGGCG TAAAGC CGCCGC TATACTAAAACAACA 69 39 SFV_RS09330 1705792 .. 1705819 + -9.9 -3.46647 GGGCAACTAATCTCC TGCCGGGCGTGA ACTCA TCGCGCCCG-CA TCTTTACTGCATCGA 75 31 SFV_RS09335 1706544 .. 1706575 + -7.4 -2.79679 AGGTGTAATCGAGTC GATGCCTGATGACAT GCA ATGAT-TCAGGCATC TATAGTGAGGCTATT 58 33 SFV_RS09340 1711539 .. 1711557 + -6 -3.28472 GCTGACCTTCAAATC CTCAATGA CTA TCATTGCG TGGTTTTTGCTGACG 56 477 SFV_RS09355 1712848 .. 1712875 + -9.9 -3.01791 GCACCGGATAAAGGA CTAACGGATGC CCGTTC GCATCCGTCAG TATTGCAGGACGGAT 71 239 SFV_RS09365 1714403 .. 1714432 + -12.3 -3.59432 ACACTTCGCTAAAAC TTTACCCTGTTGT TACG GCAACAGGGTAAG TTCATCTTTTGTCTC 95 29 SFV_RS09370 1715221 .. 1715242 + -14.5 -5.38326 TGTCAGCAACTGTAA CGCAGAAGG TTAT CCTTCTGCG TTTTTGTTTAATTAG 100 138 SFV_RS09385 1718004 .. 1718018 + -7 -3.07895 ACTATCGTCGTTAAT CACCCG TTG CGGGAG TCTCTTCCGGCTCCC 58 27 SFV_RS09395 1720455 .. 1720474 + -7.1 -2.91276 ACGTCGGATTATAGA CTCGCGG TTTTTT CTGCGAG ATTTCTCACAAAGCC 59 225 SFV_RS09400 1721834 .. 1721849 + -3.2 -3.86307 GGATCGATTTCAATG TTGACG CGTG CGCCAA GTTTTTTCTTCCCAA 55 165 SFV_RS09410 1723970 .. 1724000 + -12.7 -4.57073 TCCCGCTAATAAAGA CA-AGGCGCAACCT TCAC GGGTTGCGCCTGTG TTTTTACGCAGGCTG 100 32 SFV_RS09420 NONE SFV_RS09425 1725721 .. 1725743 + -4.9 -4.78661 GAGTCCACTCGGACG CACCAGATT TTCTT AATCTGGTC TTTTCCTTTTTCCCT 75 21 SFV_RS09430 1726153 .. 1726167 + -8.5 -4.3014 ACAGAATTTAATCAA GGGCG GTTAG CGCCC TTTTCATCCCTGTCT 84 40 SFV_RS09435 1728119 .. 1728132 + -8.1 -2.72144 CAATTCTGGCGTTTG CGCCA AAGC TGGCG ATTTGCACCAGGTCA 57 276 SFV_RS09480 1735218 .. 1735249 + -3.8 -4.18197 AACTTCGGCACCAGA CGTTGCGCAAACAGC GAA GTT-TTTGCGTAACC TTTTCCCTGGAACGT 62 199 SFV_RS09485 1737038 .. 1737054 + -10.8 -5.99154 AATTTGTATATCGAA GCGCCC CTGAT GGGCGC TTTTTTTATTTAATC 100 58 SFV_RS09490 1737575 .. 1737593 + -14.6 -5.74122 CTGTGAAGTGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGTCTGCTA 100 47 SFV_RS09545 1750088 .. 1750108 + -16.9 -3.61715 ATAAGTAATTTCTCA TCAGGCGGC TCT GCCGCCTGA TTGTTAACACCGCTA 100 33 SFV_RS09550 NONE SFV_RS09555 NONE SFV_RS09560 NONE SFV_RS09565 NONE SFV_RS09570 NONE SFV_RS09575 NONE SFV_RS09580 NONE SFV_RS09585 NONE SFV_RS09595 1759245 .. 1759264 + -15 -2.76815 TAACTAAACCTTCAT GCGGCGGA TTTT TCCGCCGC CTTATTGAGCGAGAT 89 38 SFV_RS09600 1760495 .. 1760520 + -10.5 -3.80841 ATGACCTTAACAAGG CACCCGACA TAAATTCC TGTCGGGTG TTTCGTCATCATCAT 80 79 SFV_RS09605 NONE SFV_RS09615 NONE SFV_RS09620 NONE SFV_RS09625 1765612 .. 1765629 + -6.2 -4.13945 TCGGATTTTACTTAA CCGGGT AAATTC GCCCGG TTTTCGCATGGAGAT 68 45 SFV_RS09630 1766625 .. 1766659 + -7 -2.60054 AGTTGAAGACTATTT CTGGCGGCACTGCGCG CAG CGGGTAATGCTGCCAA CTTACTGATTTAGTG 55 6 SFV_RS09635 NONE SFV_RS09640 NONE SFV_RS09645 1769216 .. 1769240 + -13.6 -3.08201 CCAAAATAATAACAG CCCCGTCAAC ACATC GTTGGCGGGG ATTTTAGCAATATTC 87 32 SFV_RS09650 NONE SFV_RS09655 1770992 .. 1771015 + -15.4 -2.91322 TTAACGGTAACGGTG TCCCGAAACG AACC CGTTTCGGGA TAATTTCCAAAGTCT 93 47 SFV_RS09660 1772687 .. 1772709 + -13.5 -4.81685 ATGGTTATAAGACAA GGGAGCGAT AATTC ATCGCTCCC TTTTTCGTGCTTACT 100 51 SFV_RS09665 1774127 .. 1774165 + -16.2 -2.60763 ACTACCATGCTTACT TTGTAACAAGCCGGTG CTTTACC CACCGGCTTGTTACAC CTTGTGAAATATCCC 100 41 SFV_RS09670 1775613 .. 1775625 + -3.3 -2.52676 GGCGCTGGGTCATCG CGGAA GCT TGCCG TCAGTTAGCAGAATG 42 5 SFV_RS09675 1776189 .. 1776202 + -9.5 -4.55798 GACAAATTCCTCTCG CCCGC ACTC GCGGG TTTTCCTTTAAGGTG 89 39 SFV_RS09680 NONE SFV_RS09685 NONE SFV_RS09690 NONE SFV_RS09695 1779461 .. 1779471 + -2.4 -5.24129 GGAAACCGCACGTTG CCGC AAG GCTG TTTTTTCTACGAACG 74 65 SFV_RS09710 1782827 .. 1782848 + -12.3 -2.65942 CCATCTAAGCCTGCA CCCGGTAGT GAAG GCTACCGGG CTATTTCCCTCTCCC 81 33 adhP NONE SFV_RS09720 1784592 .. 1784611 + -6.4 -4.19506 TCTACAATATGAAAA TGGCGC CTTTTACA GCGCCA TTTTCAGCTTAAAGT 70 208 SFV_RS09745 1790346 .. 1790368 + -13.4 -3.1706 TCGTGGTTAAAATAA TTGCCGGGTC TAC GGCCCGGCAG TTAATCAGATAAATT 91 31 SFV_RS09755 1792486 .. 1792505 + -10.7 -5.00138 AACGTCCTCTCCTGA CCAGCCC TTCTCT GGGCTGG TTTTTGATTTAAGTG 100 39 SFV_RS09760 NONE SFV_RS09765 NONE SFV_RS09770 NONE SFV_RS09775 1795336 .. 1795357 + -3.1 -3.54436 CAATTCATGGCCTTT TTAGTGA ATAAATCA TCACTAA TTCTATAAGTGTCTG 50 156 SFV_RS09780 1797111 .. 1797125 + -6.4 -2.66964 TCAGATCCCAATTCA TTCCTG GAG CAGGAG TCATGTCATGAGTAA 53 85 narZ NONE narH 1801808 .. 1801822 + -5 -3.64609 ACCGTTATAAAAACA GGCAAT GTC ATTGTC TTTCAGGTGGTTATA 57 85 SFV_RS09795 1802178 .. 1802196 + -5.8 -3.47227 CACGGTTCACTGGCC GGACGGAG TCG CCCCGCCC TTCTGATGCTTCCCC 57 1 SFV_RS09800 1803634 .. 1803653 + -11.4 -4.06903 TGAGTAATTACTTGA TGCCCGGT ATTT GCCGGGCA TTTAATTTAACGATT 91 270 SFV_RS09825 NONE SFV_RS09830 1808462 .. 1808477 + -7.6 -3.40403 CAGAAAGGCGCTTAA GAAACG GATG CGTTTC TTATCGTGAGAAAGA 62 417 SFV_RS09875 1813325 .. 1813346 + -7.1 -2.66216 GTGGCACGGTTCACT GGCCGGACG GAGT CGCCCCGCC CTTCTGATGCTCCCC 57 55 SFV_RS09880 1814988 .. 1815001 + -3.8 -4.83615 GTCGCTGAAGTCTCG CCAG CGTCTT CTGG TTTTTCTGAAAACTG 73 473 SFV_RS24490 1816082 .. 1816101 + -7 -4.07568 AACCGCGCCTTATAT CCCCGCCC TGAA GGATGGGG TTTTACGGCGCACCG 70 251 SFV_RS09910 1819900 .. 1819928 + -12.5 -3.28791 CAAGGATAAAACCAT TGCGCAAAGCGAC CTG GTTGCTTTGCGGA TTGTCCACCCGACAT 83 115 SFV_RS09925 1821332 .. 1821349 + -2.6 -4.30719 CTTGTTACGCGGTTC CACCCA CAGACT TGGGCG TTTGTTATACCAGCC 60 510 SFV_RS09940 1825140 .. 1825155 + -9 -2.75229 GTTCTGAAAGGTGAA GGGATC TGTC GATCCC TCCTTGAACATTTTC 66 34 SFV_RS09950 1828131 .. 1828153 + -7.7 -3.81951 GTGTGGCAACATACG TCAGGTCCG CCACC CAGACCTGA TTTGGTGCTGTAGGA 69 489 SFV_RS09965 1829784 .. 1829816 + -4.9 -4.92385 TAGACCCGTATTCTT CGCCTGTACCA CGGGTCGGTTT TAGTACAGGCG TTTTCTTTAAATATC 77 465 SFV_RS09980 1831563 .. 1831584 + -13 -3.43853 ACTCTGACGCGCACA GGCGGAGG AAAAAA CCTCCGCC TCTTTCACTCATTAA 100 34 SFV_RS09995 1835351 .. 1835375 + -5.7 -2.87931 CATTGCTGCCACGCC TGCTGGACGTT TTC GACTTTCAGCA TCTGTGCACGATCGC 49 404 SFV_RS10005 1840272 .. 1840284 + -4.1 -2.94099 ACGTCCAGAACCGCA TTCTG TGC CGGAA TATGTCGTGGAAACG 45 416 SFV_RS10015 NONE SFV_RS10020 1841847 .. 1841857 + -3.2 -4.41895 CAGTACACCTCAATA TGGC AGT GCTA TTTTGATTCGACGTT 62 72 SFV_RS10050 1849004 .. 1849049 + -3.3 -4.88736 AAAGCGGTTACACAT GCTGCCGGAAATCATCATT TTTTCACC AAAGCTGATTTCTGGCGGA TTTTTATCGCTGGTC 74 157 SFV_RS10065 NONE SFV_RS10070 NONE SFV_RS10075 1853802 .. 1853828 + -15.3 -3.34192 ATCTGTTTTAACTAA TTGGCGTTGCA GTACA TGCAACGCCAA TTAGTTAGCGGAATT 100 166 SFV_RS10080 NONE SFV_RS10085 NONE SFV_RS10090 NONE SFV_RS10095 1855290 .. 1855305 + -4.6 -5.27769 CGTCGAGAGCTGTCC TGCGCG TTGC CCCGCA TTTTTACTTTTTTAT 80 369 SFV_RS10105 1859045 .. 1859064 + -11.4 -4.16226 AATTCTAAAAAAAAA GCCCGGAC GACT GTTCGGGC TTGTCTTTTTATATG 93 63 SFV_RS10110 1860512 .. 1860530 + -10.2 -5.03945 GTTCTAAATCCTCCT GCCCGCTG TTA TGGCGGGC TTTTTCTGCTTATTC 93 34 SFV_RS10115 1861086 .. 1861105 + -10.7 -4.95957 TGCGCTGACACTAAC GCCCGCA CATTGC TGCGGGC TTTTTGATTCATTTC 100 33 SFV_RS10120 1862200 .. 1862223 + -14.6 -2.80074 AATAACCAGGATAGC GCCCGATGCG CAAG CGTATCGGGC TACTCTTATGGAGGC 89 36 SFV_RS10140 1866696 .. 1866706 + -2.4 -4.21194 CCAGTTTTCTTGCTT CGCC TGC GCCG TTTTACGTAGTGCGA 58 88 SFV_RS10165 NONE SFV_RS10170 1870965 .. 1870979 + -2.1 -3.48629 GGCATAAGGCGTGGA CAG-CG GTAT CGTCTG GTTTTTCAATTTCCT 47 161 SFV_RS10180 NONE SFV_RS10185 1872680 .. 1872708 + -10.3 -5.9003 CTGCTGTGTGTACTG TAGAGTCTGGCGG ATG TCGACAGGCTCTA TTTTTTTATTCATTT 100 53 SFV_RS10190 NONE SFV_RS10195 NONE SFV_RS10200 1874579 .. 1874627 + -12 -3.23638 CGCATAACTCACTAT CCTTCTGTCATATCATTAAATT TTTCT GATTTATTGATCTGGCAGAAGG TTCATCACTGTTTCA 83 47 SFV_RS10205 1875679 .. 1875700 + -10.1 -5.30155 TCTTCAATAACTGAC AAGGCCCGA GTTA TCGGGCCTA TTTTTTACTTACTGC 100 45 SFV_RS10220 1878696 .. 1878718 + -3.5 -3.63589 AGGATTTTTTCTGCC GCGTTGTAAT CGGC ATTACG-CGC TTTAACGGTATTTTC 53 227 SFV_RS10240 NONE SFV_RS10245 NONE SFV_RS10250 NONE SFV_RS10255 1883393 .. 1883406 + -2.3 -2.59569 GGCTGAAACCATTGC CCACC ACTA GGTTG ATATTGATTTGGAGG 39 16 SFV_RS10260 NONE SFV_RS10265 NONE SFV_RS10270 NONE SFV_RS10275 1886091 .. 1886119 + -7.5 -2.66316 AAAAATCAACCACAC CCGCCAGTA TTCTGTATATT TACTGGCGG TCATATCGTGAGAGG 57 91 SFV_RS10280 1887792 .. 1887821 + -5.1 -5.7946 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTTATTGGAAA 100 352 SFV_RS10305 NONE SFV_RS10310 1890597 .. 1890613 + -2.1 -3.07233 TACGCTAGGCTTTTT CGGCCTG GAG CATGCCA TGTTGCGCATTATCG 42 33 SFV_RS10315 1891679 .. 1891700 + -7.3 -3.45366 GTACCTGGGCGATAA CGCCGTGGAA TAA TTCCG-GGCG TTGATTAATTGCAAC 61 429 SFV_RS10330 1894710 .. 1894722 + -4.7 -4.73613 TTGATCATCTGCCCA GCGCG CCA CGCGA TTTTGTTGATAATCA 75 365 SFV_RS10345 1896578 .. 1896598 + -15.5 -4.4267 AAAACGCTACAAAAA TGCCCGATC CTA GATCGGGCA TTTTGACTTTTACAG 100 51 SFV_RS10365 1902000 .. 1902026 + -11.6 -2.87146 AGTTACTTAATTTAA GTGACGATCGCT AAA AGCGACTGTCAC TGTCCTAATCTTATA 78 12 SFV_RS10370 1903590 .. 1903621 + -15.8 -2.92668 GTAGAGTAAGTACGT TGCCGGATGCGGCG AAAA CGCCACATCCGGCC TATAGTTCAATGATA 100 32 znuC 1907889 .. 1907928 + -3.6 -3.33815 CGAATTGTTTTGCGT CGGGGAAATGATCGCTCA TGAT TGAATTATTATTTCCCGG TTGGTTAGCCGGGAT 48 5 znuB 1908720 .. 1908731 + -7.2 -3.30124 ACATTTGTCGGATGC GGCG CGAG CGCC TTATCCGACCTACGG 63 54 SFV_RS10410 1911480 .. 1911509 + -7.1 -5.02074 TAGCGGGCAGTTTCA GCAAGGTGCGG ACCATATG CTGCACCTGGC TTTTTTCGGCACTAC 86 161 SFV_RS10435 1915557 .. 1915571 + -5.6 -3.01712 GTTACTTTATTCGTA CCCCTT ATA ATGGGG TGTTAGCCAGCCAGA 52 5 SFV_RS10440 1916942 .. 1916967 + -4.1 -2.72379 ATGCGCGACGGGACT TTTTAT-ACCCC GCA GGGGTCATAACA TGCTTGACAACTTAA 45 2 SFV_RS10445 NONE SFV_RS10455 NONE SFV_RS10465 1920358 .. 1920369 + -5.8 -4.2074 GCCCCCGGGCCTCCC CGGA TTCA TCCG TTTCTCTGTTCAGCC 70 91 SFV_RS10560 1936988 .. 1937009 + -10.1 -3.13826 GTCCTTTTTTCTACG GTCCTCCTC CCCG GAGGGGGGC ATTTCATTATTTTTC 74 290 SFV_RS10595 NONE SFV_RS10600 1940726 .. 1940738 + -4.8 -4.56597 GGCTTTCCGGCTGAT GGTC GTACG GACC TTTTTACCCCGGAGA 70 438 SFV_RS10655 1948580 .. 1948590 + -6.8 -3.61894 GCGACACCCAAGAAA GGGA AGC TCCC TTCTTAACCGACCTT 64 212 SFV_RS10665 1951510 .. 1951520 + -2.4 -3.04894 CCTATCATAGACAGG TGCC ATC GGCC ATTTTAAAGGGAGTT 42 49 SFV_RS10670 NONE SFV_RS10675 NONE SFV_RS10680 1953823 .. 1953840 + -14.1 -3.20751 GTTTGCATAACCTCA GCGCCCG TTTC CGGGCGC TATTCACTTCTTACG 95 162 SFV_RS10690 1955453 .. 1955468 + -6.8 -2.82623 TGTCTCCGGGTGTCG CGTGCG CAGT TGCACG TCATTCTCAGACGAA 53 55 SFV_RS10720 1962426 .. 1962451 + -9.8 -5.46657 TTTCGTGAGAGTGAA GCCTGATCAGG GTTAG CC-GATCAGGC TTTTTTATTGCCATC 100 47 SFV_RS10725 1963252 .. 1963272 + -4.5 -3.91674 TTAACCGCCCTGAAC CGCCCCGGG TTT CCTGGAGAG TGTTTTATCTGTGAA 59 208 SFV_RS10770 1970523 .. 1970534 + -2.2 -3.63515 AGTTCAAAGCCGAAG CTGT CAGA ACGG TTCTTGAAAATCAAC 49 123 SFV_RS10775 NONE SFV_RS10780 NONE SFV_RS10785 1972258 .. 1972270 + -5.5 -3.63744 CGTTTTGGACGCGAC TCCTG TTC CGGGA TGTTTTCCAACAGCA 58 234 SFV_RS10850 1985203 .. 1985221 + -8.8 -3.06483 TATCGCGCTGCTGGC TTTCCGCG CTT CGCGGAAC TATCTGCTTTAGGTC 66 76 SFV_RS10880 1992431 .. 1992458 + -11.3 -5.52986 GAAGTTTTTGAGAAA CCGCTGCCTCA TCTGTT TGAAGCAGCGG TTTTTTTAATGGGAT 100 72 SFV_RS10890 1993096 .. 1993108 + -9.1 -3.64488 GATGGCAAGAAATAG CGCCT GCC AGGCG TCTTTTCCGGCCATT 75 148 SFV_RS10895 1993515 .. 1993530 + -6.8 -2.71364 TAAATATTTTAATCA GCGAGG GGAT CTTCGC TGATTAAAGAAATAG 55 38 SFV_RS10900 1994178 .. 1994199 + -17.3 -3.61178 AAAACTAATGCTCTC CGGCGGCAG GTTT CTGCCGCCG TTTCAAATCAGTGAC 100 33 SFV_RS10910 1995914 .. 1995927 + -3.8 -3.37761 ATGTGACCTCTTAAT GCAG GCAGCA CTGC TTAAATTTCTTACCA 50 92 SFV_RS10950 NONE SFV_RS10955 2001005 .. 2001031 + -14.5 -3.62046 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTATTGACAAAATCA 100 33 fliD NONE fliS NONE SFV_RS11010 NONE SFV_RS11015 2012466 .. 2012488 + -10.5 -2.93853 AGGTGATTTAAATCC ATCCCCGGC GGCAA GCCGGGGAG ATTTCATTACGGCAG 72 30 SFV_RS11025 NONE SFV_RS11030 2014536 .. 2014564 + -11.7 -2.77182 TCAGAAGTAATCCCT CATTCCCGCTGTG GCC CACAGCGGGAACA TCGTTACCTCTGACA 79 31 SFV_RS11035 2015346 .. 2015363 + -9.9 -2.94888 AGGACCCCTGCTACG TTCAGGC TGTC GCCTGAA TCATTTCGGTGGGTT 70 64 SFV_RS11055 2017018 .. 2017035 + -8.3 -3.08224 AACGAGCCTTATATC CCCGCCC TGAA GGACGGG CTTTTACGGTGCACT 66 196 SFV_RS11060 2018771 .. 2018790 + -7.8 -4.78107 TTACCCTTTATTTTC TGGGACGT TTCA ACGCCCCA TTTTTAATAATACTC 86 148 SFV_RS11085 2021467 .. 2021481 + -8.6 -4.88067 TAGCGCCACGCCGGG TTCACC GAG GGTGAA TTTTTCTGCCTGCGT 93 71 fliF NONE fliG NONE fliH NONE fliI NONE fliJ NONE SFV_RS11120 2028030 .. 2028040 + -3.2 -2.79831 GCGTGTAACAGGTAA CAGC GGC GTTG ATATTTTCGCCTAAC 43 1 fliL NONE fliM NONE fliN 2030028 .. 2030038 + -2.4 -3.22298 TCCGAGCGGATGCGC CGCC TGA GCCG TTAGTGATGAATAAC 44 11 SFV_RS11140 2030393 .. 2030414 + -2.1 -3.29782 AAAAATTTGCTTAAG CGTGGCGGG AGAT CCTGATGCG TCGTTTGTTTTCTGT 45 8 fliP NONE fliQ NONE fliR 2032405 .. 2032419 + -2.8 -3.05935 GTCCGCCTGAAAAAT TGCG AGAGTGG CGCA TTAGGTGACCCATGT 43 210 rcsA 2033125 .. 2033170 + -9.7 -2.61126 TTTTGTCAACATGCG CTAACACATTCTGACTGGTGG TTTC CCACCAGTCAGGCTGAATAAG ATTACTCTGCTTTCT 68 22 SFV_RS11170 2033940 .. 2033955 + -6.8 -2.85351 AGAAATGTGACGCGC GTCACC CCTT GGTGGC TCTGGTGTCAACGGG 56 215 SFV_RS11175 2034480 .. 2034492 + -4.8 -2.62184 ACGCAGCTGCATGAG GCGT CGGTA ACGC TAATCTGGCGCGACA 48 50 SFV_RS11180 2035217 .. 2035231 + -3.5 -3.62096 CGCCTGATGACCAAA GCGGT CATTA ATCGC TTTAAAATGGTCAAG 53 379 SFV_RS11205 2039487 .. 2039510 + -3.2 -4.07568 ACGCAACGCCACCGC CTGTTTGA TTTTTGGC TCAAGCAG TTTTGCCACCGCGGC 58 516 SFV_RS11240 2043835 .. 2043847 + -4.1 -3.44051 ACCCAGCGCACTATG CGGAT GCC ATTCG TTATAATGCTCGAAC 52 124 SFV_RS11245 2045013 .. 2045032 + -8 -3.49618 AACTAGTATTAAGAC TATCACTT AAAT AAGTGATA TTGGTTGTCTGGAGA 67 433 SFV_RS11255 2045290 .. 2045319 + -13.7 -5.4756 TAAAACATAACACCA GCCTGAGTTCG TCCCTCAT CGAACTCAGGC TTTTTTATTGGCATT 100 69 SFV_RS11260 NONE SFV_RS11265 NONE SFV_RS11270 NONE SFV_RS11275 2047504 .. 2047536 + -12.8 -5.055 AAGCGCATAATCAAT CGCAGCCACGTT AATACTCAC GACGTGGCTGCG TTTTTTCACGGTTAA 100 61 SFV_RS11290 2050169 .. 2050224 + -4.1 -3.49048 CGTAAATATGTAAAA GCTGATCTCTGCTA--CTGTTAGGGAG GTGA CTCCCTGACAGATTAACAGTAAACAGC TCTTGTTGGTTAACG 52 43 SFV_RS11295 NONE SFV_RS11300 2052072 .. 2052087 + -6.2 -3.87569 TGAGAATACCATGCT CTCATT TCCT AATGAG TTGTTGCATTTTTTC 66 197 SFV_RS11305 2052786 .. 2052808 + -3.4 -5.44119 GTAGCGAAGAAGTGG TCGAGGAGAT GAT GTCTCATTGA TTTTTTTGCGCTGAC 81 3 SFV_RS11310 2053158 .. 2053181 + -6 -3.94773 TTATGGACTTTGTCC CGCGGCT-TTA ATC TGACGGCCGCG TTCCTTTTTTGGCTC 66 10 SFV_RS11320 2054888 .. 2054920 + -11.4 -4.08919 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT 91 33 SFV_RS11325 2056905 .. 2056916 + -5.8 -4.2074 GCCCCCGGGCCTCCC CGGA TTCA TCCG TTTCTCTGTTCAGCC 70 91 SFV_RS11415 2064477 .. 2064527 + -12.1 -4.64844 TTCAGCATGGATTGA GCCTCAGATTAATGTTAAGCGTCT TGCA GGACGCGTAATGTTAA-CTGGGGC TTTTCTCTATCTGCC 100 287 SFV_RS11425 2065035 .. 2065058 + -3.1 -3.44381 GCTTATTGCCTTATC TGGCAACCT ATAATC AGGTTTCCG CTTTTTCAGTTGGCT 50 363 SFV_RS11435 NONE SFV_RS11440 2066567 .. 2066584 + -12.7 -2.55351 TGTAGTAACGCCACG GGCAGGG GATC CCCTGCC GTTCGTATGAACGGC 76 345 SFV_RS11455 NONE SFV_RS11460 2068803 .. 2068819 + -5.1 -4.11692 AGATGGTTGCCATGA TGCCAGG AAA TTTGGCA TTTTAACAGTCCCTG 63 162 SFV_RS11470 NONE SFV_RS11475 2069973 .. 2069984 + -2.2 -3.38316 AAATTGGTGGTCAAA TCTG GGAT CAGG TTAGTTCGATAATGG 45 148 SFV_RS11480 2071310 .. 2071328 + -11 -3.60814 TCTGGCAAATTACCA CCACCTCT ACA GGAGGTGG TTCTATATAGACTTT 83 61 SFV_RS11495 NONE SFV_RS11500 NONE SFV_RS11505 NONE SFV_RS11510 2074590 .. 2074613 + -15.4 -3.78096 CGCTCGTGATAGCCT GGCGAAGATC ATCC GATCTTCGCC TTATACTTTTGTTTC 100 32 SFV_RS11515 2076195 .. 2076227 + -7.7 -3.34013 TAAGTAAGACATCTG GCAAATAGCCTGC AATAAAC GCGGGCTGCTTGC TTCCTTGGGCAGATG 65 81 SFV_RS11520 2077206 .. 2077240 + -13.9 -2.90382 ATCTCTAATTATATT TTAAAGAAATCTGTC TTTAT GGCAGATTTCTTTAA TCTCATATAATTCTT 87 33 SFV_RS11545 2079550 .. 2079568 + -11.7 -4.86133 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG 100 38 SFV_RS11560 2081959 .. 2081976 + -11.3 -5.05505 GCCAAATTCAAAAAA GCCTGCT TTTG AGCAGGC TTTTTACTTTCTAAT 100 37 SFV_RS11605 NONE SFV_RS11610 2088991 .. 2089003 + -4.8 -3.15013 CCGGATGCAAGAAAT CGCT GAAAA AGCG TATGTATTGTGGAAT 52 382 sbcB 2091842 .. 2091854 + -3.3 -3.88291 TCAATTACCAACTCA TCGCC GCT GGCCA TTTCTGCCAGTGCTG 55 204 hisG NONE hisD NONE SFV_RS11680 2101699 .. 2101711 + -3.3 -3.76224 GTCATTGACGCCTTA CGTGC GGA GCAAG TTTGATGAGTCAGAA 53 8 SFV_RS11685 NONE hisH NONE SFV_RS11695 NONE SFV_RS11700 NONE SFV_RS11705 2105610 .. 2105635 + -14.7 -4.21607 ATCCGGCAAAAAAAA CGGGCATGGTG TCAC CACCCTGCCCG TTTCTCTTAAATGCA 100 162 SFV_RS11860 NONE SFV_RS11865 2137567 .. 2137577 + -5.4 -3.04527 AGCAGCGCATCGCCA GTGA TCA TCAC GTTATCTTTTTGCAT 50 325 SFV_RS11910 2148152 .. 2148166 + -7.1 -3.30124 GCGAACGCCTGATGC GACGC TTTAC GCGTC TTATCAGGCCTACAG 63 429 SFV_RS11930 2152119 .. 2152133 + -7.8 -3.23274 TTGTTCCGCCTCTGT TGGGGG GTA CCCCTA TTAAGTTGTCAAGCA 64 15 SFV_RS11940 2154425 .. 2154452 + -8.4 -3.92373 GGAAGCGCCAAAAGG CTGGACGTCAGT GTGA GCTGGCGTCTGG TTTATGCATCCGCTG 76 10 SFV_RS11945 NONE SFV_RS11950 2157101 .. 2157139 + -9.6 -5.07652 AGGCGGCAGAAAAAC TGGCTCAGGCGCAGGCT GATTTA AGCC-GCTGCTGAGCCA TTTTCTTTTAACGAA 93 408 SFV_RS11960 2159499 .. 2159510 + -3.6 -3.4252 TTGGTCGCCGGAAGC GGTG CGAG CGCC TTATCCTGCCTGCGG 50 43 SFV_RS11970 2163883 .. 2163908 + -4.1 -2.72379 ATGCGCGACGGGACT TTTTAT-ACCCC GCA GGGGTCATAACA TGCTTGACAACTTAA 45 2 SFV_RS11975 2164956 .. 2164966 + -6.8 -3.01712 AAAAAGGAGCACGCT CCTG ATG CAGG TGTTACCCCCGAGCA 58 21 SFV_RS11980 NONE SFV_RS11985 NONE SFV_RS11990 NONE SFV_RS11995 NONE SFV_RS12000 2174824 .. 2174841 + -5.5 -4.18197 ACTTTAATCAGTAAA CAGCACC TTTA GATGCTG TTTTCGATAAGCAAT 67 165 SFV_RS12005 2175233 .. 2175243 + -4.6 -3.55444 GGGCGTGGGTTGTTG GCGT CCG GCGC TTTACCAGATCCCCC 54 51 SFV_RS12010 2176849 .. 2176880 + -8.1 -5.28176 CCAGGAACCACCTCC TTAGCCTGTGTAA TCTCCC TTACACGGGCTTA TTTTTTGTACATAAG 91 159 SFV_RS12025 2178729 .. 2178740 + -5.8 -3.30124 CGTAATGCCGGATGC GGTG TAAA CACC TTATCCGGCATACAG 56 73 SFV_RS12070 NONE SFV_RS12075 NONE SFV_RS12080 2189904 .. 2189948 + -15.8 -3.79993 GCTGTACTCAATAGG CCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGG TATTTTGCTATCTAA 100 62 SFV_RS12110 2194654 .. 2194672 + -7.4 -4.08919 CTCTCTGCTCGCTAA GGATGCTT TTA GGGCATCC TTTCATTTACACTTT 72 108 SFV_RS12115 2195591 .. 2195607 + -5.1 -3.28791 TTTATTGTTGCTTTG TTACCTG TGG CTGGTAA TTGTGAAACGGGAAT 54 488 SFV_RS12150 2201246 .. 2201262 + -7.3 -3.18728 TTATACGTTAACTGA CCACAAT GCT GTTGTGG TTGACTATTAACCAT 62 82 metG 2204951 .. 2204970 + -10.7 -5.01553 ATAATCCCCCTTCAA GGCGCTG CATCGA CAGCGCC TTTTCTTTATAAATT 100 37 SFV_RS12170 2205381 .. 2205392 + -2.2 -3.63515 AGTTCAAAGCCGAAG CTGT CAGA ACGG TTCTTGAAAATCAAC 49 123 SFV_RS12175 NONE SFV_RS12180 NONE SFV_RS12185 2208451 .. 2208463 + -4.7 -3.05844 ACGCTACGCGAAAAC GCCCG CAC CTGGC TGTTGAAATACCCGG 49 141 SFV_RS12190 NONE SFV_RS12195 NONE SFV_RS12205 2213266 .. 2213278 + -4.1 -3.72027 GATGCGTAATTTTTT CAGCA CGA TGTTG TTATTAATGCGACGT 56 267 SFV_RS12225 2217692 .. 2217717 + -2.5 -4.59773 TTGTGATATTAATCC TGTCACGTTAC GCGC GTGACGCAACA TTTTTAAAAATCGAC 65 180 SFV_RS12230 2218252 .. 2218284 + -8.4 -5.63236 AAGTTTACCAGCCAA CCGCAG-CACGTCCT GCAT ACGTCGTGTCTGCGG TTTTTCTTTTTCGCT 100 94 SFV_RS12240 2219301 .. 2219333 + -11.4 -4.08919 AAAAATAGCATCCAA CCGCAGCACGTTCTT GCTT AAGA-CGTGCTACGG TTTCCTTTACGATTT 91 33 SFV_RS24505 2221293 .. 2221318 + -10.3 -2.80784 ACTGACTCCGGAAAA ACGGAGGCCCG CCCC CGGGCCTCCCC TGATTCATCCGTTTC 67 66 SFV_RS12275 NONE SFV_RS12280 2225336 .. 2225356 + -3.3 -2.84325 TGTTATTATTAAGTC TAATGTCAT TTA AAGGCATTA TCATATTTACGAAGA 44 220 SFV_RS12285 2226336 .. 2226355 + -5.7 -3.16191 CCATAATGCGTGCAC TGGCG-CG ACATC CGACGCCA TTCATGGCCATATCA 52 512 SFV_RS12300 2228452 .. 2228474 + -7.7 -3.81951 GTGTGGCAACATACG TCAGGTCCG CCACC CAGACCTGA TTTGGTGCTGTAGGA 69 517 SFV_RS12315 NONE SFV_RS12320 NONE SFV_RS12325 NONE SFV_RS12330 NONE SFV_RS12335 NONE SFV_RS12340 2232564 .. 2232574 + -6.8 -2.70932 CCGTAAAGGATCAAG GCGA TAA TCGC TGGTTGCAGACCAAA 53 379 SFV_RS12370 2240453 .. 2240469 + -10.8 -5.8096 GCCGTCTGCCCCGCC GCCGCC ATTTG GGCGGC TTTTTGTTTTTTATA 100 91 SFV_RS12385 2243140 .. 2243158 + -5.8 -2.81642 GGAATCGAAGGCTCC GCGTCGGG CTT CACGTCGC TATCATCCATGCTGT 51 299 SFV_RS12400 2245813 .. 2245841 + -5.1 -3.04398 CACATCCATGTGGGC TGCCCCGGCCTTC AGG GAACGCCTCGGCG ATTTTGACGCCACCA 51 292 SFV_RS12410 NONE SFV_RS12415 2248198 .. 2248211 + -4.5 -2.68202 TAATGGGCTAAAATT TGCGA TACG TCGCG CATTTTTGATGTAAG 46 30 SFV_RS12420 2249275 .. 2249291 + -10.9 -4.15044 TGGTGTCGAAATTCC CGGCAAA CAG TTTGCCG TTTCTTGCGCAAAAC 86 93 SFV_RS12425 NONE SFV_RS12430 2250336 .. 2250354 + -6.2 -3.3782 TTTTCTCTTTTCTGT TAATTATT GAG AATAATTA TTACTTCACTCAATA 59 43 SFV_RS12435 NONE SFV_RS12440 2253384 .. 2253394 + -2.4 -4.63218 GGCAAAAATGTTCTT ACCG AAG CGGG TTTTGTTCCACAACA 66 451 SFV_RS12465 2258453 .. 2258484 + -5.8 -3.21099 AGCGATACGCCCAGT CC-AGCTGCCATTGC AGG GCGATGGCAGGAAGG TTAATGGTCACCCCA 54 366 SFV_RS12480 NONE SFV_RS12485 2260923 .. 2260938 + -11.8 -2.56271 CTGAAGTGAAAGTCC GCCCGG TTCG CCGGGC ATCTTCTCATCAGAA 79 32 SFV_RS12510 NONE SFV_RS12515 NONE SFV_RS12520 2268961 .. 2269001 + -4.7 -2.52896 CCAATGGTGTAACAA TGTTGCCGGATTCGACGC TTGACC GCATCTAATCCGGCT-CA TAAATTGCACACTAC 46 29 SFV_RS12535 2272151 .. 2272170 + -4.3 -3.28857 ATTATTTGCAATAGC GCGATTGC CGGAT GCAA-CGC TTAATACGTTTTATC 52 43 SFV_RS12570 2281648 .. 2281667 + -5.7 -3.16191 CCATAATGCGTGCAC TGGCG-CG ACATC CGACGCCA TTCATGACCATATCA 52 512 SFV_RS12585 2282939 .. 2282958 + -10 -5.46129 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA 100 46 SFV_RS12590 2284618 .. 2284656 + -8.1 -4.03183 TTTAACGATTTCTGC GGTTAAAGCGGATGAAG CTCAC CTTCGTCCGCTCTCCCC TTCTCTTTTCTGCCT 74 36 SFV_RS12595 NONE SFV_RS12600 2286812 .. 2286823 + -2.2 -5.61596 AGGTAATTAGTCTCG TGTC GCTT GGCA TTTTTTTATAACGAT 86 374 spr 2287491 .. 2287508 + -11.3 -5.85244 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT 100 75 SFV_RS12610 NONE SFV_RS12615 NONE SFV_RS12620 NONE SFV_RS12625 NONE SFV_RS12630 2294865 .. 2294876 + -2.2 -3.53012 CATGTTGCAGCAAAC TCGT CCTG GCGA TTTACAAACAGGCAC 47 105 SFV_RS12650 2299367 .. 2299392 + -7.5 -2.70525 AAAGCAGATCACTTA CCTGTTGCTGG GTCG CCTGTAGCAGG ATTAATTTAAGAGAG 58 103 SFV_RS12655 2299714 .. 2299743 + -15.9 -2.90219 TTGCTGAATAAGTTG TAAAAAACCCCGC TCCG GCGGGGTTTTTTG TATCTGCAGATTATG 100 41 SFV_RS12665 NONE SFV_RS12670 2303021 .. 2303057 + -12.5 -3.18634 AGACGAGAAGCGTTT TATCGCTAACTGATTAA TTA TAAATCAGTTAGCGAAA TATCTTACTTGCAAT 86 13 SFV_RS12675 2303202 .. 2303218 + -8 -5.76633 AATCCCAAGAAAAAA CCAACC CTTAC GGTTGG TTTTTTTATATCTGC 100 43 SFV_RS12690 2307027 .. 2307049 + -14.9 -3.16035 TTTGTCATCAGTCTA GCCCGATGG CATCA CCATCGGGC CTCTTTTTATTTACT 95 207 SFV_RS12770 NONE SFV_RS12775 2320201 .. 2320237 + -12.3 -2.71011 CGCGTCTTATCAGTA TACGCCACATCCGGCAT ACC ATGCAGGATGTGGCACA TCATTACAACGCAAT 82 135 SFV_RS12820 NONE SFV_RS12825 2331965 .. 2331998 + -14.7 -3.55622 GACTAATCATCTGTA GGCCAGATAAGACGC GTTA GTGTCTTATCTGGCA TTTGCACCGATTGCC 100 35 SFV_RS12880 2349497 .. 2349541 + -12.3 -3.53811 ATGCGACGCTTGCAG CGTCTTATCAGGCCTAC AAATGCTCTCC GTAGGCCAGATAAGGCG TTTACGCCGCATCCG 93 69 SFV_RS12890 NONE SFV_RS12895 2354514 .. 2354524 + -6.8 -3.68529 CCAGTCCTGCGTAAT GCCT GAA AGGC TTTGCCTGCTGGCGT 64 61 SFV_RS12900 NONE SFV_RS12905 2357771 .. 2357788 + -7.7 -3.88291 AGCGTGAACGCCTTA TCCG-GCC TAC GGCTCGGA TTTGTAGGCCTGATA 72 146 SFV_RS12910 NONE SFV_RS12915 2359329 .. 2359342 + -6.7 -3.62096 TACAACGATTACATG GCGTA GTAA TACGC TTTCACCTGCTCCCA 64 86 SFV_RS12925 2360821 .. 2360852 + -3 -3.73534 TCAGCTGTACCAGAT TGAGCTCCATGCCCA TTT TGGGT-TCCAGCTCA TTCTTAATACGCTTC 53 453 glpA NONE SFV_RS12945 NONE glpC 2367224 .. 2367251 + -14.2 -4.65895 TAAACTCCCTTCTGA TGCCCGGTAAGC ATGT GGTTACCGGGCA TTTTTGCGTACACGA 100 38 SFV_RS12955 2368363 .. 2368387 + -2.7 -3.84825 CCACTAATTAACACA GGCCCACAG CCGATCC CCATGGGCC TTTGATATCAATAAC 52 34 SFV_RS12975 2371452 .. 2371492 + -3.4 -3.84246 TTTGAAAGGTCTTCT TTAACAATGATGACAGCCA TCAC TGGCTGTCAG-ATTGAAAA TTTAGTGATTAACGA 53 22 SFV_RS12985 NONE SFV_RS12990 NONE SFV_RS12995 NONE SFV_RS13000 2377381 .. 2377393 + -4.1 -2.57985 AATTGCGGGTAGTCG CTGAT GAA ATCGG TACGTTACCTTATCG 44 22 arnT NONE SFV_RS13010 NONE SFV_RS13015 2379897 .. 2379922 + -6.1 -2.58667 AATCCCCCACTTTCA CGGCGAAGTCA CTCT TCACTTCGGCG ATCATTTTTATCGCG 50 168 SFV_RS13065 2389022 .. 2389040 + -7.4 -3.28712 GCTTATTATTAAAAA CAGGGTGA AAC TTGCCCTG TTATAGCAACCCGCG 63 45 SFV_RS13070 NONE SFV_RS13075 NONE SFV_RS13080 2390671 .. 2390689 + -11.7 -2.981 GAGCGCCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA 80 49 SFV_RS13155 2409460 .. 2409486 + -13.8 -3.28791 CTGTAATCTTAATTT CACTGCCGGA GATTGCA TCCGGCAGTG TTATCCCGCCACAAT 100 35 SFV_RS13160 2410141 .. 2410188 + -12.8 -3.28712 CGCTGTAAGCAGCCG GAGTCTG-CGTCGCATCAGGC AATAAGC GCCGGATGCGACATCAGGCTC TTGTCAAAACGGAAA 90 33 SFV_RS13190 2415348 .. 2415375 + -16.4 -4.36914 CTGACTGCCTGATTT CA-CACCGCCAGC TCA GCTGGCGGTGCTG TTTTGTAACCCGCCA 100 29 SFV_RS13195 2417604 .. 2417626 + -10.7 -5.64304 CTGCGGATATCTGAA CCGGAAATA ATCAC TATTTCCGG TTTTTTATTCTCTTA 100 66 SFV_RS13200 2419283 .. 2419300 + -12.7 -5.32944 CACTAAAAATGTTAA GAGCCGC AATT GCGGCTC TTTTTTCATTCTGCC 100 35 SFV_RS13220 NONE folX NONE SFV_RS13230 2423307 .. 2423319 + -7.7 -2.54732 TCCGCCAGTTAACTC CCTGT GTT ACAGG ATTAGTGGCTTTGCG 59 59 flk 2441072 .. 2441084 + -4.7 -2.78384 GCCAGCGGCCCGGAG ACGCC GAG GGCGA TATCCTGAAACGCGG 46 143 mnmC 2446129 .. 2446148 + -10 -2.56596 ACAACTCATCATCAC TGGCATGG TCAA CCATGCCG TCGATTAATGCCAGA 66 364 SFV_RS13375 2451612 .. 2451626 + -2.9 -4.18018 ATTCGTAACGCCTTA TTATG GCTGA CATAA TTTTCACTCCAGGAG 60 460 SFV_RS13435 2464751 .. 2464771 + -15.5 -3.64822 GTTCGCCTGGATAAA GTCACCTGC TAT GCAGGTGAC TTTAACTCCCCCACT 100 47 SFV_RS13440 2466300 .. 2466319 + -8.6 -5.85425 GATAACAACAAAAAA GGTGAGTT TTGC GACTCACC TTTTTTATTTGTTTC 100 172 SFV_RS13450 2468356 .. 2468374 + -4.5 -2.78715 CGGCAGCGTACTTAC CCCGC AGTCCATTA GCGGG TATACTCGCCGCATT 47 65 SFV_RS13455 NONE SFV_RS13460 2469503 .. 2469514 + -5.8 -4.63218 CGAGAACGACATGGC CCAG CCCA CTGG TTTTCTTGCGAACAG 77 426 SFV_RS13485 2474813 .. 2474826 + -2.3 -3.60475 ATCAGAACATCAAAA TCTGG TTTG CCCGA TTTGAAGTGAGCATT 49 304 SFV_RS13495 NONE SFV_RS13500 2477327 .. 2477337 + -5.4 -3.53224 TATCTGGCAAAAGGC CGTT AAT AACG TTTCAACGCAGCATC 57 20 SFV_RS13515 2481209 .. 2481231 + -4.2 -2.71712 TTTTTTTCTTCTCTG TTGTGGTC TTTGGTC GACCATAA GTTTCGCAGACGAAG 45 62 SFV_RS13520 2484777 .. 2484803 + -11.6 -3.34517 AATGACTAAATTGCG GCTCCCACAATG TTC TAATGTGGGAGC TATTTACCAGCACAT 83 32 SFV_RS13550 NONE SFV_RS13565 2493806 .. 2493825 + -13.6 -3.89215 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGACG 100 474 SFV_RS13575 NONE SFV_RS13580 NONE SFV_RS13585 2498572 .. 2498587 + -3.3 -3.53444 TTTCAGGGCTAACGT CAGAA GGTTAA TTCTG TTTCCAGCAGCGTCA 50 29 SFV_RS13620 2507545 .. 2507556 + -7.2 -3.09516 ATATTGCGTTAACAG GCCG CTGA CGGC TTCGATCGTGAAGGA 60 105 SFV_RS13625 NONE SFV_RS24510 2508244 .. 2508254 + -6.8 -2.79796 GACTCATAACCAGAA TCCG TGT CGGA TCTAATCCCATCAGA 53 281 SFV_RS13640 2510827 .. 2510872 + -16.3 -3.17212 CTGGTGCTGTAAAAT CATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG 100 29 SFV_RS13655 NONE SFV_RS13660 2514334 .. 2514356 + -12 -4.55887 AGCATAAATAAAAAA CGGCAGGATA TTA TCTCCTGCCG TTTATCTTTTTACAC 100 34 SFV_RS13670 NONE SFV_RS13675 NONE SFV_RS13680 2516484 .. 2516514 + -18.5 -2.94194 GCACGACCCACCAAT GCAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCGATTTGTA 100 184 SFV_RS13685 2516974 .. 2516984 + -2.4 -2.66316 CCCGACCAGCCATTA GCGC ATT GCCC TGGTCTCGTACCACG 38 57 SFV_RS13695 2518958 .. 2518990 + -2.8 -4.25104 CTTAAAGCGGACGCT TC-AGGGGCTGGAC CAGTTGC GTC-AGCCCCTCGG TTTTAATCAGCAGCG 58 36 SFV_RS13715 2523267 .. 2523286 + -12.8 -3.7347 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA 100 65 SFV_RS13720 2524412 .. 2524427 + -9 -5.26316 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC 100 54 SFV_RS13725 2525013 .. 2525036 + -4.5 -4.11692 GTTAAACTGATGGCG GAACTCGAG TAATTT CCCGGGTTC TTTTAAAAATCAGTC 61 14 SFV_RS13730 NONE SFV_RS13735 2527359 .. 2527390 + -16.8 -2.70932 TAATTCTTGCCGCAG TGAAAAATGGCGCC CATC GGCGCCATTTTTTA TGCTTCCGCCAGCGG 100 38 SFV_RS13745 2528704 .. 2528723 + -2.1 -3.73968 GATAAAACGGTGCCT GCGGA AGGAAATTAA TCCGC TTTGGTAAGGCATTT 51 11 SFV_RS13750 2529535 .. 2529578 + -15.4 -3.20494 TGACAAAGTGCACTT TGTTTATGCCGGATGCGGCG TAAA CGCCTGATCCGGCATAAAAA TATTGCTAATTCAAT 100 86 SFV_RS13790 NONE murP 2539233 .. 2539260 + -14.2 -3.767 AAGCAGTAATAAAAA GGCCAGTCAGTA ATGT TACTGCCTGGCC TTTAATCAATGAATC 100 154 SFV_RS13820 NONE SFV_RS13825 2544249 .. 2544283 + -7.1 -4.02456 TTCTCGCAAAACGTC GCCAGCGCCTGTTGGAC AAA GCCCCACAG-CGC-GGC TTTATGCTGCTCTTT 70 512 SFV_RS13845 NONE SFV_RS13850 2548794 .. 2548808 + -9.2 -5.14645 TGCAGTGAACACAAG CGGGCG CAA TGCCCG TTTTTATTGCCTTAT 93 126 SFV_RS13860 NONE SFV_RS13865 NONE SFV_RS13870 2550762 .. 2550779 + -9.8 -2.53581 ATCGGATAAAAGAAA GCCGGG AATTAC CCCGGC TGACTTAACAATGTG 68 40 SFV_RS13875 NONE SFV_RS13880 2551447 .. 2551465 + -8.9 -3.05844 ACGTCATGTTGTTCT GAGGTGA GCATA TCACCTC TGTTCAGGTGGCCAA 68 54 SFV_RS13885 2552208 .. 2552224 + -2.9 -3.31269 CCTGTGCAAATATGC TGGCATA AAT TCTGCCG TTACTGTGATGTGAA 46 18 SFV_RS13890 NONE SFV_RS13895 NONE SFV_RS13900 2555128 .. 2555147 + -4.9 -2.87319 TGAAGGGTGTAAGCA GTGCCAG TAGCTC CCGGCAC GTTTGATCGGTTCGG 50 383 SFV_RS24515 2555708 .. 2555720 + -4.1 -3.44051 ACCCAGCGCACTATG CGGAT GCC ATTCG TTATAATGCTCGAAC 52 40 SFV_RS13965 NONE SFV_RS13970 2565503 .. 2565523 + -3.1 -4.56775 CCTCTCCCCAGAAGG GCGAGGGGA CGG TCCGTGCGC TTTTTAGGGCCGCAT 64 80 SFV_RS13990 NONE SFV_RS13995 2574592 .. 2574613 + -8.7 -4.70879 ATAAGCAATAAAAAA GGCGACATG CCAA TGTGTCGCC TTTTTCAACTTTCCG 89 37 SFV_RS14000 2574981 .. 2574994 + -2.5 -3.60925 TTCTTAATGTTTACG TTAAA AATG TTTAA TATTATTTAATAGTT 50 160 SFV_RS14005 NONE SFV_RS14010 2576595 .. 2576610 + -5.4 -2.82623 CGTATCATGGAACAG CTCGTC GCGT GATGAG TGGTTCTGCAAGAGG 50 14 SFV_RS14015 2576906 .. 2576919 + -8.1 -3.28924 AACGATCCCTGATGC GACGC TCAC GCGTC TTATCAGGCCAGGTA 65 97 SFV_RS14040 2581877 .. 2581895 + -11 -3.41878 GCCCAGTTCCTGCCA GTCGCTGT CAG ACAGCGGC TTATAAGTTACGGCC 80 110 gcvR NONE bcp 2584876 .. 2584889 + -5.3 -2.68088 CATACCTCACTTCTC GTGAT CAAG ATCAC ATTCTCGCTTTCCCC 48 81 SFV_RS14065 NONE SFV_RS14070 NONE SFV_RS14075 NONE hycD 2588647 .. 2588658 + -3.6 -2.87211 GCTTGCATGGGTCTT CTGG TTAA CCGG TCTGTAAGGAGCACT 44 7 SFV_RS14085 NONE hyfE NONE SFV_RS14095 NONE SFV_RS14100 NONE SFV_RS14105 NONE SFV_RS14110 NONE SFV_RS14115 2595798 .. 2595813 + -6.2 -3.15427 GCCAGAAAAATTGCG TGAGAA GGAT TTCTCA TTAATAAGGACTGTT 57 23 SFV_RS14120 2597820 .. 2597834 + -3.5 -3.31766 TGCAGCGTCTGGGAA TCTCG GTTCG CGAGG TGTTGTAATCTGCTT 48 3 SFV_RS14125 2598035 .. 2598045 + -3.2 -3.16742 CTTTCCGTTATCGCC GATG CCC CGTC TTCATAGGCATTAAC 46 8 SFV_RS14130 2598715 .. 2598748 + -11.7 -2.96444 TCAGGAATCCTGAAA AATCAGCCCGGCGAA ACAG TTCGTCGGGCTGAAG ATTATTCTTGCGCGA 80 181 SFV_RS14140 NONE SFV_RS14145 2602280 .. 2602313 + -3.7 -4.11484 CCCAGATTCAACTGC CGCGGTGGACGATCG CCGG TGATCAACAACCGTG TTTTGCCCGATTCCA 60 438 SFV_RS14165 NONE purN 2606814 .. 2606833 + -10.7 -4.74504 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT 95 43 SFV_RS14175 NONE SFV_RS14180 2610586 .. 2610614 + -18.2 -3.6279 CGCCGCTTAATGCTT TGCGGGCCGACG AGAAA TGTCGGCCCGCA TTATTCAGGCACTTT 100 31 SFV_RS14190 NONE SFV_RS14195 NONE SFV_RS14210 2614710 .. 2614721 + -2.2 -3.18991 GTAACATAACGGCAC TTCG CTGT CGGA TGCTTTTGCTCTTAT 44 64 SFV_RS14215 NONE SFV_RS14220 2616103 .. 2616122 + -10 -4.80178 CTTGAAGATAAAAAA CCCTCTGT AGTA ACGGAGGG TTTTGTTCATTCATA 91 70 xseA 2620838 .. 2620874 + -3.6 -4.09685 TCGATATCAAGCCAT GCCCGTGCTGACAGAAG TAAT CTACTG-CACCGCAGGC TTTTAACACCTGCAA 60 66 sseA 2634193 .. 2634206 + -5.9 -5.84381 CAGGCAATAAAAAAC CGCCG AATT TGGCG TTTTTTTATTGCTGG 100 49 SFV_RS14355 2644777 .. 2644812 + -4.5 -3.55548 CTCTGAAGCATTAAT GACTCAGGCGGGTGA TATCAC TCACCCGCCCTCGCC TTTCAGGCGCTATTC 54 27 SFV_RS14360 NONE SFV_RS14365 2647501 .. 2647517 + -7.9 -3.17212 TTGCACCACTATCAA CCACGGC AAC GCCGTAG TTGCTCCCATAATGC 61 281 SFV_RS14380 NONE SFV_RS14385 NONE SFV_RS14390 NONE SFV_RS14395 NONE SFV_RS14400 NONE SFV_RS14405 2654334 .. 2654365 + -16.6 -4.4715 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTTATAAATTACAG 100 32 SFV_RS14440 2664635 .. 2664652 + -11.3 -3.23216 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTGATGATCATAAAC 81 45 SFV_RS14450 2667619 .. 2667643 + -7.1 -2.74192 ACATCCGGCAACCCT TGACGCGGT TTAAATT GCCGCGTCG TCCTCTTCACCGGTA 58 61 SFV_RS14480 2677948 .. 2677963 + -3.2 -4.10552 AATCCGTCGAGGATT GCGC TTTTTTCT GCGC TTTAATTTCCTGGCG 57 39 SFV_RS14495 2680509 .. 2680520 + -3.6 -4.53303 ACGTTCTTGTATACG CCGT GTCT GCGG TTTTATATAACCCTG 64 350 SFV_RS14505 2683461 .. 2683472 + -5.8 -4.2074 GCCCCCGGGCCTCCC CGGA TTCA TCCG TTTCTCTGTTCAGCC 70 91 SFV_RS14535 2686966 .. 2686981 + -6.8 -2.82623 TGTCTCCGGGTGTCG CGTGCG CAGT TGCACG TCATTCTCAGACGAA 53 55 SFV_RS14560 NONE SFV_RS14565 2691399 .. 2691456 + -13.6 -4.91977 AACTGAATCACGCCA GGCTTTCTGCTCGTCGATAATCCGCCGG ATCT CAGGC-G-TTATCGGCAGGCGGAAAGCC TTTTGTGTTTTCATA 100 198 SFV_RS14575 2692839 .. 2692869 + -9.3 -3.71284 CCACGCGGATAAAAT TTAATATTCTACT CTGGA AGTAGAGTATTAA TTATATTACTGGGAA 75 22 SFV_RS14600 2694253 .. 2694289 + -10.9 -4.56597 AATTAAAGTTAAAAA GTAAAACCCCCGTTC CTTACCA GTTCGGGGGTTTTAC TTTTTAAAGAGAACG 93 71 SFV_RS14665 2705849 .. 2705869 + -3.9 -4.08216 AATGCCAGCAGCACC CGATGCG GCAGTCG CGCTTCG TTTTCCGCCACATCC 60 137 SFV_RS14675 2707929 .. 2707954 + -15.5 -5.40072 ACAGAAGAGTAATCT CAATGCCGGGT TTAA GCCCGGCATTG TTTTTTTACGCAACC 100 29 SFV_RS14685 2709541 .. 2709564 + -16.8 -3.22884 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC 100 35 SFV_RS14695 2710979 .. 2711004 + -14.7 -3.0169 AATTTGCGGGGAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT 89 40 SFV_RS14710 2712682 .. 2712702 + -14.7 -4.50976 TCTCTTTAATCTTAC CGGGGCGCA TCT TGTGCCCCG TTTTCTCCTCTGCGA 100 32 SFV_RS14715 NONE SFV_RS14720 NONE pssA 2717610 .. 2717626 + -9.4 -5.04249 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG 93 32 SFV_RS14730 2718187 .. 2718201 + -4.3 -3.32022 GGAACATCTCAGCCT TCAGT ATTCC ACTGA TTGATGTATAAAAAC 51 240 SFV_RS14760 NONE SFV_RS14765 2726686 .. 2726702 + -5.1 -3.45571 CCACGTTCTGTATAG TACTCGG CCA CGGAGTA TTCATATTTCGCCAG 56 263 rluD NONE SFV_RS14780 2729152 .. 2729166 + -5.7 -3.83998 ATAACCTTGAATAAT TGAGG GATGA CCTCA TTTAATCTCCAGTAG 61 98 SFV_RS14785 2731810 .. 2731835 + -16.3 -3.90762 CCCTTCGGGGCTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG 100 53 SFV_RS14805 2736321 .. 2736332 + -3 -4.41047 TTGTTAATTCTTAAC TTTC ATAT GAAA TTTTCCTTAAGGCAT 60 160 SFV_RS14810 2736730 .. 2736755 + -17.7 -5.84381 GCTGCGAAACGAACC GGGAGCACTGT GAAT ACAGTGCTCCC TTTTTTTATTCCTGC 100 194 SFV_RS14815 NONE SFV_RS14820 NONE SFV_RS14825 2738649 .. 2738667 + -4.4 -4.93898 TTGTGTTGTTGCACG GTGAGCCG CTA TGGCGCGC TTTTTATACTGCTAT 75 288 SFV_RS14830 NONE SFV_RS14835 NONE gudD 2742891 .. 2742910 + -11.4 -3.58522 GACAGAAAACCAAAA CCGGCTCT ATCT GGAGCCGG TTTGAGACTGATGCT 87 41 rumA 2747228 .. 2747245 + -5.5 -2.80816 GTTAAATAGTTACGA TTTGCCG ATTT CGGCAGG TCTGGTCCCTAAAGG 50 32 relA 2749511 .. 2749542 + -13.8 -3.44672 GGAGTTAGTCTTACA TAGCTGGATATGGC GTCA GCCGTATCCAGCGA TATCTTTTACTCGAA 100 33 mazG 2750463 .. 2750478 + -4 -4.43844 TGCGTCAAAAACATT TA-CCCC AAA GGGGCTA TTTTCTCACTCCTGA 64 98 pyrG 2752274 .. 2752298 + -18.7 -4.07562 AAAAAGTTAGAACGG CAACGCGTACC TTG GGTACGCGTTG TTTGTCTGGAGTTTC 100 44 eno 2753663 .. 2753682 + -13.6 -5.31275 TATCTGATTTGATAA TGCCAGCC TTCG GGCTGGCA TTTTTTATGGTGGAG 100 50 SFV_RS14885 NONE SFV_RS14900 2757221 .. 2757242 + -14.5 -3.9461 GGGGCGTTGCCTTTT CGGCTTCTC AGGC GAGAAGCCG TTCTTATTACCGGAC 100 67 SFV_RS14905 2758586 .. 2758597 + -3 -3.12668 AAATGTAGGAGGTGC GAAT GAAC ATTC TGTTAGCGTTTAAAG 43 1 SFV_RS14910 NONE SFV_RS14915 2760477 .. 2760502 + -3.9 -5.08824 TTCATCGCATACCAG CCCGCCAGC AATCAGCG GTTGGCGGA TTTTTTCCGTCACCC 79 278 SFV_RS14940 2766395 .. 2766416 + -8.7 -5.27335 ACTGAGCTAATAGCA GGCCTGCTGG TAA TC-GCAGGCC TTTTTATTTGGGGGA 95 56 SFV_RS14945 NONE SFV_RS14950 NONE SFV_RS14955 2767305 .. 2767333 + -8.7 -2.70932 AAATGACTATTTATC CGGTGCGCCGCCA GAA TGACGGCGCGGTG TGGTTAAACGAAGCG 64 35 SFV_RS14965 2768433 .. 2768456 + -5.2 -2.77781 TGTTCTCCAGAGTTT TGTGCCCGCA ATTT TGCGGAGACA TCAATTTTGGTACGC 49 122 SFV_RS24525 NONE SFV_RS14975 NONE SFV_RS14980 NONE SFV_RS14985 NONE SFV_RS14990 NONE SFV_RS14995 2772499 .. 2772513 + -2.8 -4.67048 GCAGGAGGCGCTGCG CTGATG CGC CATGAG TTTGTTTTGCCCTGG 65 22 SFV_RS15000 NONE SFV_RS15005 2773258 .. 2773273 + -11.8 -5.28176 GCCACACAGCTTAAA CCCGCC TCCG GGCGGG TTTTTTATGCCTGAA 100 115 SFV_RS15010 NONE SFV_RS15015 2773515 .. 2773530 + -4.6 -3.05384 TTCGAGTCCTCGGTG GTGGGC CAGC GCCGAC TTAGCTCAGCAGGCA 49 18 SFV_RS15020 NONE SFV_RS15025 2773851 .. 2773866 + -3.2 -3.36655 TGTGGGTGGTTTGTT GGATAG AGTG CTTTCC TTACTGTATATATCG 48 198 SFV_RS15030 NONE SFV_RS15035 2774807 .. 2774820 + -2.3 -2.79273 GCCTGATGACTGGAT CCAGC CGGG GCTGA CTTATCTTAAAAGGC 40 12 SFV_RS15040 NONE SFV_RS15045 2775917 .. 2775934 + -10.5 -4.60797 AAGTCCATTTAATGA GCCTCGC ACTT GCGGGGC TTTTATATGTCCGCA 91 59 SFV_RS15050 2776419 .. 2776438 + -4.2 -3.62046 TGTATTCCCGTATTA CTGAGATG GCTT CATCCCGG TTATTAAAACGATAG 53 176 SFV_RS15065 NONE SFV_RS15070 2778191 .. 2778208 + -9.1 -3.23538 GCTCTTCATTACAAA GCCCATC TACT GGTGGGC TTGATAATGGCTTAT 70 58 SFV_RS15075 NONE SFV_RS15080 2779223 .. 2779243 + -4.5 -3.91674 CTGAAGGCACTGAAC CGCCCCGGG TTT CCTGGAGAG TGTTTTATCTGTGAA 59 206 SFV_RS15100 NONE SFV_RS15105 NONE SFV_RS15110 NONE SFV_RS15115 NONE SFV_RS15120 NONE SFV_RS15125 NONE SFV_RS15130 2785582 .. 2785596 + -2.8 -3.41704 GAAGAGGAGACAACA TCACGT GAG ACGTAA TCTTTCACATATTAT 46 11 SFV_RS15135 NONE SFV_RS15140 NONE SFV_RS15145 2788570 .. 2788588 + -11.7 -4.88407 GAAATAATCCGTGAG CGGGAGC TAAAT GCTCCCG TTTTTCATTCAATCA 100 34 SFV_RS15150 2789007 .. 2789017 + -3.2 -2.82036 GGCAGTAACAGGAGA TGTC GTG GACG GTTTCGATAATCTGT 43 33 SFV_RS15155 NONE SFV_RS15160 NONE SFV_RS15165 NONE SFV_RS15170 2791124 .. 2791141 + -14.1 -4.65895 ACGATACTCATCATT GCCCCGG TTAT CCGGGGC TTTTTGCATCCGGAG 100 45 SFV_RS15175 NONE SFV_RS15180 NONE SFV_RS15185 2795096 .. 2795127 + -15.2 -3.35798 TTTCTGGAACGGCAC GGTGGCGTCCGC GCATTTCA GTGGACGCCACC TTATGACTGGAAACT 100 220 SFV_RS15190 2795894 .. 2795912 + -3.1 -3.21099 CGCCCGGCGATGTGC GCCA-GCG GAGT CGTGTGGC TTCGTGGTGAGAACG 46 77 SFV_RS15195 2796570 .. 2796580 + -2.4 -2.55351 TGCAACGATTTGGCC GCCG CAT CGAC CTTCGTGTGAAAACG 39 5 SFV_RS15200 2797151 .. 2797164 + -9.5 -4.64846 ATGTTTCATGTGAAA CCGCC TGCG GGCGG TTTTGTCGTTTATGG 91 47 SFV_RS15205 2800689 .. 2800706 + -11.3 -5.4505 TATAACCCAGATACG GGCACCA GAAA TGGTGCC TTTTTTATTGCAGAA 100 45 SFV_RS15210 2801364 .. 2801383 + -10 -4.85599 CACAGTGTTATGACA GCCCG-CTG GTT CAGGCGGGC TTTTTGTGGGGTGAA 91 53 SFV_RS15215 NONE SFV_RS15220 NONE SFV_RS15225 2803886 .. 2803908 + -6.2 -3.84825 CACGGCTTCTGACCA TGGCTTCGGC AGT GCGGAGGTCA TTTGCTGTCACTCCC 63 343 SFV_RS15235 2805629 .. 2805663 + -7.2 -2.72977 TGCGTTGACAAAAAA TTAGCGCAAGAGGA CAAAAAA TCACCTTGCGCTAA TGCTCTGTATCAGGT 58 33 cysJ NONE SFV_RS15260 NONE SFV_RS15265 2812437 .. 2812462 + -9.7 -5.45802 GCCGGATAAATTAAA CGCCTCTGTCA GAAA TGATGGGGGCG TTTTTATTTTGCGAG 100 46 SFV_RS15270 2812836 .. 2812861 + -6 -2.62292 TCGAAGAAGTAGCCA CCACGCGGGG GTAAAA CCCCGCGTAC TGAATTGTGATGGTT 53 29 SFV_RS15275 2814399 .. 2814415 + -5 -3.92577 TCATGCCAGCTATTT CCCGCC GGGAA GGCAGG TGTTTTTGCGCGTTG 60 307 SFV_RS15285 NONE cysN NONE SFV_RS15295 2818502 .. 2818519 + -6.2 -3.15544 GATCCTGAGACACCA CCGGGT TTCCAT GCCCGG TTCGTCAAAGTAACA 57 33 SFV_RS15300 2818954 .. 2818980 + -4.4 -2.59191 TGGGTATACGTAACA ATGGACAAATGT GGT ACATTTGCCCGC GTTGTCGCGGTATCC 46 112 ftsB NONE SFV_RS15310 NONE ispF NONE truD NONE surE NONE pcm 2823096 .. 2823110 + -2.8 -4.7254 ACGGTAATTATGTCA CTGGTT ATT AACCAA TTTTTCCTGGGGGAT 65 133 nlpD 2824315 .. 2824327 + -3.3 -3.35996 CGTCAAGGGATCACG GGTAG GAG CCACC TTATGAGTCAGAATA 48 73 SFV_RS15340 2825341 .. 2825364 + -14.6 -5.67711 AGCATCTGTCAGAAA GGCCAGTCTC AAGC GAGGCTGGCC TTTTTCTTTTGTTTG 100 44 SFV_RS15350 NONE SFV_RS15355 2827530 .. 2827547 + -2.7 -4.16842 GTGGACCGAAATCGA CTACCTA TGAC TAGGTAA TTTATTCAAGATAAC 58 19 SFV_RS15365 NONE SFV_RS15370 2830821 .. 2830840 + -9.3 -3.05384 GCCTGAATAAAAAAA CAGTCCG CGGGAA CGGACTG TTAAATAAAGGAAAC 68 35 SFV_RS15380 2833044 .. 2833054 + -3.2 -4.28254 CACCAGTGCGTCGAT TGCT TCC GGCA TTTTACCTGTTGGAA 60 460 SFV_RS15400 2835056 .. 2835092 + -4.5 -4.32067 CCTGCAATAACATCT GGT-TACTCATGCTTC ACAGAA GAAGCATGAGACTACC TTATTTTATAAAATG 66 44 SFV_RS15415 2838656 .. 2838674 + -2.4 -3.16564 GCCCTTTAAGATTAA GATGTAAT ATA AATGCATC TTAATGAGGTGGAGG 44 19 SFV_RS15420 2839050 .. 2839075 + -15.5 -2.79968 ACCTCGTGAATAGTA TGCCGGACAGG CAGA TCTGTCCGGCA ATTTGCAGTTAAATC 93 28 SFV_RS15455 2845548 .. 2845562 + -11.4 -3.57263 GCTTTGCCCGTTTTG CAGGCG TTA CGCCTG TTTGGGGATGGGCGT 87 47 SFV_RS15465 2846284 .. 2846311 + -7.7 -3.27051 TTTCCCTGATCAATA GCGGC-GTGGCA TGGTT TGTCGCCGCCGC TGTTCTGGCATTTCT 64 47 SFV_RS15470 NONE hycD 2848874 .. 2848892 + -3.7 -2.71263 TGCATTTTTAGCGTT CGTCTCC TTGCT GGCGGCG TGATTAAAGAGAGTT 45 4 hycE NONE SFV_RS15485 NONE SFV_RS15490 NONE SFV_RS15495 NONE hycI NONE SFV_RS15505 2853662 .. 2853678 + -5.9 -3.30701 ATATCGCGCACAAGT GTTTACA TAT TGTGAAC TTGGATTTGATGAGC 56 90 SFV_RS15510 NONE SFV_RS15515 2854570 .. 2854606 + -9.4 -3.43338 GTCGCACGAACTATG TAG-GCCGGATAAGGCG TTCA CGCCGCATCCGGCACTG TTACTTACTCTAAAT 75 99 SFV_RS15530 2858784 .. 2858813 + -7.9 -5.18357 TAAACATTGTCATCA CATGTCATCGTCA CTAG TGTCGATGACATC TTTTTTCCTGCATTA 91 38 SFV_RS15535 2859518 .. 2859576 + -6.7 -3.21099 ACGGAGCGGGCGGTA TCGC-CGACCTGAGACTGCCGGATACGAC GCT GTCGTGTCCGGCAGGG-CGGGTTACGCAA TTCATGATGGCGGGA 59 96 SFV_RS15540 2861927 .. 2861958 + -13 -3.04715 CATGCGTCCCCGTAG GTCGGATAAGACGC GCCA GCGTCGCATCCGAC ATTTTAGGCACAGTA 86 100 SFV_RS15555 2866291 .. 2866304 + -2.3 -4.3467 GCAGGTTAATTGCGC CGGTG AGTT TGCCG TTTTCATCTACCACT 60 66 SFV_RS15595 2872533 .. 2872577 + -5 -5.28778 GGCGCGAGTACAGTA GCT-ATTTACAAGAGGGGGGC GTGA GCTTCCCTCTGGCTAATCAGC TTTTTTCTGAATCCT 82 25 SFV_RS15600 2873173 .. 2873198 + -6.3 -3.90744 TTTCTACAAAACACT TGATACTGTAT GAGC ATACAGTATAA TTGTTTCAACAGAAC 66 23 recA 2874511 .. 2874528 + -8.3 -4.86862 TTATCAGCAAAACCT GGGGCGC ATCT GCGGCCC TTTTGCTTTTTTAAG 89 220 recX 2875113 .. 2875157 + -7.3 -3.56675 TCTTATTCCCACTTT TCAGTTACCAGC-CCGGCG-GT TAAG ACACGCTGGAGCTGGTGGC-GA TATTTCGTTAGCTTG 65 79 SFV_RS15620 2877950 .. 2877962 + -2.7 -4.10331 AATGCCATGACTGCT TACAT GTA ATGTG TTTGTCATTGCTTAC 56 158 SFV_RS15625 NONE SFV_RS15630 NONE SFV_RS15635 2878717 .. 2878727 + -5.4 -3.27029 GTTCGAATCCTCCCG GATG CAC CATC TCTTACTTGATACGG 54 17 SFV_RS15640 2878858 .. 2878868 + -5.4 -3.27029 GTTCGAATCCTCCCG GATG CAC CATC TCTTACTTGATACGG 54 17 SFV_RS15645 2879110 .. 2879132 + -3.4 -4.66833 GCGACAAAATCAAGC AATTACGCTA AAG TAGCGTCATA TTTTTCGACTTGCGA 66 128 SFV_RS15650 2879710 .. 2879729 + -3.6 -3.543 GACGCTGTGGATGTT CGCTT-GCT GTG AGTGAAGCG TTATCGCTTTTCTCG 50 14 SFV_RS15655 2880133 .. 2880161 + -2.4 -2.79831 CCGTTCAGGGCATGA TGTGGTGGCACTA ATTG TAG-GCCTGCACA TATGGTCACCATTAC 40 12 SFV_RS15660 2881918 .. 2881930 + -2.6 -3.69283 AAAAATTACCGGAGG TGGC TAAAT GCCG TTGTTAGATAGCTTC 50 168 SFV_RS15665 2882474 .. 2882493 + -12.2 -3.50422 AATTAATTGAAAAAA GCCAGTTC AAAT GAACTGGC TTAGTTGTACTTAGT 88 59 SFV_RS15745 2897268 .. 2897278 + -8.2 -2.66272 CAGATTTTTTATCCA GCCC GAC GGGC TAACTTTGCGTGCCG 59 281 SFV_RS15755 2898577 .. 2898614 + -8.4 -2.59039 TCCTGATCTAATTAC TGAGGCCGGATGTCGCT GCTAG GGCG-CGTCCGGCGTCG CTTCTCAAGCTCGTT 63 30 SFV_RS15770 2899809 .. 2899828 + -12.8 -3.29649 ACCTGTGCTCACCCC CGCGGCGT TAAC GCGCCGCG TTCCTCTGCTACACT 90 41 SFV_RS15775 2900364 .. 2900385 + -4.3 -3.07816 TGGATAATGGGAATT GGCGTCAGT AAAT GCTGGCGCA TTAACTCACTGGAGC 48 63 SFV_RS15815 NONE SFV_RS15820 2911429 .. 2911458 + -3.6 -3.01712 AGTACTGGCCTCCAC GGTCCGTGTGAACG ATAA CGTTC-CG-GGGCC TCTTACGCCGCCACA 46 303 SFV_RS15850 NONE SFV_RS15855 2916715 .. 2916731 + -12.3 -5.10077 AACAGACAGAAAAAA GGTGCTC ATT GAGCACC TTTTTTAACGTCTTT 100 39 SFV_RS15875 2920617 .. 2920642 + -19.1 -4.45544 TTTCGTAATAATTCA CGGCCCTGCAT GCGA ATGCAGGGCCG TTTTCGTTACTCCGC 100 48 SFV_RS15890 2924358 .. 2924385 + -12 -4.43307 GCTTTTAATATGACA CCGGACTCCGTT CCTC GATGGGGTCCGG TTGTTTTATTCACAC 95 108 SFV_RS15895 NONE rimM NONE trmD NONE SFV_RS15910 2926445 .. 2926466 + -11.5 -5.82281 ACATCCTGTTAAGAA GGGCTGGCC AATT GGCTGGCCC TTTTTTTGTCTGTTT 100 56 SFV_RS15935 NONE tyrA 2931656 .. 2931685 + -15.1 -4.28361 CGCCAGTAATAATCC AGTGCCGGATGAT TCAC ATCATCCGGCACC TTTTCATCAGGTTGG 100 32 SFV_RS15960 2935121 .. 2935142 + -10.1 -4.72556 GACTGGCATTACTCC CCCGGTGAC GTTT GTTGCCGGG TTTTCTCGTTTTTGG 91 43 SFV_RS15965 2936965 .. 2936984 + -12.8 -3.27786 CAGCTAAGTCCTTTC GCGCCGCT TTCG GGCGGCGC TTCCTCCGTTTTAAC 90 34 SFV_RS15970 2938391 .. 2938413 + -9.8 -3.57825 GATTAATCTCTCCCA GAGGCCTCGT TTT GCGAAGCCTC TTCCTGTTTTCTCAA 77 35 SFV_RS15975 2939254 .. 2939281 + -12.8 -2.59564 GTACGGTAACGGCGA GCCGGATACG CCGCAAAT CGTATCCGGC ATTATCACATCAGCG 81 32 SFV_RS15990 NONE fucI 2944859 .. 2944886 + -12.9 -3.01791 ACAAGCAAGAGTGGT TAGCCGGATAA ACAATG TTATCCGGCTA TATTGCAGGAGCGAT 86 90 SFV_RS16005 NONE SFV_RS16010 2946760 .. 2946778 + -13.1 -2.60212 AATCTCATACCGGTA CGCCCGC ATGAC GCGGGCG GTTATCGAATGATGG 84 39 SFV_RS16015 2947550 .. 2947571 + -8.6 -3.21993 ACGGAAAGGGTAGCA GGCCGGAG ACGACG CCCCGGCC TTGCCTGTTATCGCT 67 40 SFV_RS16040 NONE SFV_RS16045 2952430 .. 2952467 + -14.9 -3.92542 GGTTTAAGCACAGAA CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA TTGTTTAACCCTGAC 100 34 SFV_RS16060 NONE SFV_RS16065 2955019 .. 2955032 + -8.1 -6.02919 CAACCAATTATTGAA CACCC TAAC GGGTG TTTTTTTGTTTCTGA 100 35 SFV_RS16075 2958071 .. 2958086 + -6 -2.88249 GACAGACGACGACGC GCGCGG GTCA CCGCGG TGTATACCAGCTCTC 52 196 SFV_RS16140 NONE SFV_RS16145 NONE SFV_RS16150 NONE SFV_RS16155 2978482 .. 2978499 + -2.6 -4.13945 GTACGCTCTCCTGCG GGAGGG CGTACT CACTCC TTTTACCCTCACAGT 56 47 SFV_RS16160 2978820 .. 2978846 + -7.3 -2.81421 ATTGAACGTTAACAA ATAAGGTCAGC ATCCG GCTGGCCTTAA GATTTTTCTCTTTCC 58 29 tas 2979967 .. 2979994 + -12.8 -3.13403 TCCTGCACCATAAAG ATTAACGCCGGT TAAA ACCGGCGTTAAA TATTAATGACGGCGC 86 28 SFV_RS16180 2984995 .. 2985029 + -9.3 -3.28791 CCAGTAATTCTTCGA TGGTCTGGCGACGG CGAATCAA CCG-CGCCTGACCA TTATCAAACAGAACT 69 64 SFV_RS16190 2987684 .. 2987697 + -2.3 -3.94811 GTGCAACGTGACTCA ATGGC ATCC GCCAC TTTATGCATCGTATT 54 427 SFV_RS16220 2994405 .. 2994442 + -16.7 -4.8083 AGCTAATATCCGTTG TGG-ATGGTTCAAAATTG CTA CAATTTTGAACCATTCCA TTTTTCATAATATTC 100 35 SFV_RS16225 NONE SFV_RS16230 2996612 .. 2996628 + -3.8 -3.13522 TTATCTGGATTTAAC GATAAA TAACT TTTATC TGTTGCTGCCCCCCT 47 445 SFV_RS16250 NONE SFV_RS16255 NONE SFV_RS16260 NONE SFV_RS16265 NONE SFV_RS16270 3002760 .. 3002781 + -15.9 -3.08471 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCACTGAGGTTATG 100 33 SFV_RS16275 NONE SFV_RS16280 3003733 .. 3003749 + -5.1 -3.60661 GTTCTCTTGTCATTT TCGTGGT TTA AGCACGA TTATGTGATTGCCTC 57 196 SFV_RS16285 NONE SFV_RS16290 NONE SFV_RS16295 3005484 .. 3005500 + -7.2 -3.35798 TTTACCTGTCGGCAT CCGCTC AAAAC GGGCGG TTGTCGATAAACGCT 63 47 SFV_RS16300 3006138 .. 3006155 + -8.3 -3.31263 AGCTTAAATAAAAAA CCCCGAC ATTT GCCGGGG TTGTGAGCATAACGT 69 30 SFV_RS16330 3012902 .. 3012931 + -8.5 -3.77188 TACGCCTGATCTCAC TGACGGCTTAGCG CATA TGCTTTGCCGTCA TCTTTATCTTTGCGT 75 32 ygfZ 3015072 .. 3015089 + -9.1 -3.50572 CCGCCGAGCACGAAG CCGTGCC AGAT GGCATGG TTGTATGGAATGCGT 71 285 SFV_RS16360 3017827 .. 3017837 + -8.2 -2.67244 CGCGTCCAGGCTCGC CGCC GCT GGCG TGCATTTCGGTATAA 59 234 SFV_RS16405 3028667 .. 3028683 + -5.1 -2.92618 GTTACAGCCTGCGGC GGCATCT CGG AGATTCC CTTCTTATCTGGCAC 50 234 SFV_RS16410 3029698 .. 3029720 + -14.9 -2.74488 AAAAAGTTCGGTTCA GGGCGATGC ACCCC GCATCGCCC TGATTGACATCGTTG 90 417 SFV_RS16430 3033523 .. 3033545 + -8.5 -3.45434 TAATCCATCAAATAA TGCCTGATA GCACA TATCAGGCG TTGTCCTCACTTCTT 71 38 SFV_RS16435 NONE SFV_RS16440 NONE SFV_RS16445 NONE SFV_RS16450 3039145 .. 3039200 + -18.6 -3.0682 TCGATGCTGGGTTAA TGGTTTGTCCCGTCACGATCTTCAGCA ATA TGCTGAAGATCGTGGCGGTATAA-CGA TGATTTCTGATTGAA 100 26 SFV_RS16490 NONE SFV_RS16495 3047787 .. 3047806 + -3.6 -2.72991 CAATGGCTGCCGTGC GCTAAATG CATC CATTTACC TCATTAACACTGTGG 43 21 SFV_RS16500 NONE SFV_RS16505 3049209 .. 3049221 + -3.4 -4.0371 GGCGCGGCAACGGAT TGTC TTTGC GACA TTTCTCTGCCAACTC 57 70 SFV_RS16510 3050170 .. 3050190 + -7.5 -3.54424 ATCCCCTTCCACCAC CTGGCGCAG ATT TTCCGCCAG TTTCGCAACGTCAAA 64 360 SFV_RS16540 3055227 .. 3055244 + -14.1 -3.28924 TACTAAGTAAAAAAA GGGCCGC TTTC GCGGCCC TTCTCACAAAACGTC 100 31 SFV_RS16550 3058424 .. 3058455 + -8.6 -3.16323 CGGGTGCCGAACGTA GGTCGGATAAGGCG TTCA CGCCGCATCCGACA TTAATGGCACGTTTT 67 155 SFV_RS16580 3063265 .. 3063275 + -8.2 -4.36914 GCTTTTTATTTAAGC CGCG CGC CGCG TTTTATACCCCACAA 79 28 SFV_RS16590 3064743 .. 3064761 + -11.7 -5.48213 TCACCTGCGTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC 100 48 SFV_RS16595 3066574 .. 3066586 + -4.7 -3.07787 GCTTCCTCCCGTCGC GGAGG AAG CCGCC TCTTGCAGTCATCTT 49 50 SFV_RS16600 NONE SFV_RS16605 3067973 .. 3067995 + -4.7 -4.71061 TACCCCACGCGTACA ACCGCGTGG GGAGA CGACGCGGA TTTTTAACTATGCGT 71 73 SFV_RS16610 NONE SFV_RS16615 3069736 .. 3069776 + -2.3 -5.00616 TCGTTGAGACTCTGA GTGACAGCGCCCTTCTTTC CAC GCATACTGGGCGCTGTTGC TTTTTTGAACCAGGA 69 62 SFV_RS16620 NONE SFV_RS16625 3070881 .. 3070912 + -11.6 -3.17475 TGGCAGCGGCTGTAG GTCTGATAAGACGC GTTA GCGTCGCATCAGAC ATTTATTGCCTTTAT 81 119 SFV_RS16635 NONE SFV_RS16640 NONE SFV_RS16645 NONE SFV_RS16650 NONE SFV_RS16655 3075267 .. 3075296 + -12.3 -3.18115 TTCCTCGCTGAGTAA TCATTAATGCGCC TGCG GGCGCATTAATCA CTTCTTTTATCCCCC 86 26 SFV_RS16660 3076547 .. 3076569 + -13.4 -4.10429 GCTGCTCAATAATAT TCCGGGCCAG CCT CTGGCCCTGA TTTTCCAGGATGCTT 100 29 SFV_RS16665 3077077 .. 3077087 + -2.4 -3.20703 CTGAAACAACCTGCG CAGG AGG CCAG TTAATGGATAGTTAT 44 11 SFV_RS16670 3078512 .. 3078524 + -2.7 -4.26076 CGTTCATTAGCTTGG TTGAT ATC GTCAA TTTTCATCAAAATCG 60 145 SFV_RS16705 3083939 .. 3083950 + -3.6 -3.55761 TACAGCAGTTACGCA CTGG CGCG CCGG TTTAGCGCGTGAGTC 50 9 SFV_RS16710 3084264 .. 3084287 + -8.9 -3.05384 TAAAAAATAAAAACA G-TGCCGGAG CACGC CTCCGGCAGC TTGCATAAAAACAAA 68 31 mltC 3085546 .. 3085561 + -2.5 -4.57569 GAATCCCATCATCTC GCACG GTCAAA TGTGC TTTTTCAAACACTCA 63 169 SFV_RS16720 3086865 .. 3086908 + -14 -3.34013 TTAGCCACTAATTAC GCAAAGAAAAACGGGTCGCC AGAA GGTGACCCGTTTTTTTATTC TTACTTCAACACATA 100 30 SFV_RS16730 3090127 .. 3090140 + -3.7 -3.65351 TGCCGCTTTCCGCCG CCTGG ACCG CCTGG TTTGCCTGACAATGC 53 3 SFV_RS16735 3090344 .. 3090359 + -10.4 -5.42514 CACTATTTAGAAGAA CCAGCC TACG GGCTGG TTTTTTGCTTTCTGG 100 39 SFV_RS16740 NONE SFV_RS16785 3102992 .. 3103011 + -2.9 -3.33151 CGCCCCAATGCGTTC CA-GCATG TTATT CATGCCTG TATTGGTTTCGAGGA 47 206 SFV_RS16795 3105117 .. 3105132 + -3.2 -3.01791 ACACTATCAGTAAGT TGGAGT CATT ACCCCA TATTCAGCAACAAAT 45 28 SFV_RS16810 3109080 .. 3109100 + -3.1 -4.63542 CCTCTCCCCGGAGGG GCGAGGGGA CCG TCCGTGCGC TTTTTAGGCGTTGTC 66 487 SFV_RS16870 3118200 .. 3118214 + -2.8 -3.1811 ACGTCAGATGGATAA TGACGT ACC ACATCA GTTTGTTATCCGGGA 45 139 SFV_RS16880 3119701 .. 3119727 + -14.5 -2.86539 TTTAGGTTAAAAAAA TGCCCGGTTGT GAAAA GCAACCGGGCA TCATTGTGAATTCAC 89 31 SFV_RS16900 3122599 .. 3122619 + -3.3 -3.29459 TTGGACAATTTTGCA GACATTTTA TTG TGAAAAGTC TTAAATTGTTGCGTC 48 52 SFV_RS16905 3123382 .. 3123407 + -11.9 -3.5486 CCTGACGATTTTCCC CGTTCCCGG CTGCTGTA CCGGGAACG TATTTAATTCCCCTG 88 36 SFV_RS16920 3125726 .. 3125751 + -19.1 -2.62184 CTTAAGTTCACAACA CCTCACCGGAG CCTG CTCCGGTGAGG TCATATAAAGGAGGA 100 85 dkgA 3126611 .. 3126639 + -10.9 -3.05775 TAACGTGCAAATTCT CCCGGTGGCGGTA ATG TTCCGCTACCGGA CTTTTCAGAAATCAT 76 38 SFV_RS16930 NONE SFV_RS16935 3128041 .. 3128068 + -14.9 -5.78622 AGAATGATAAAAAAA TCCCCGGCAGC ATGTCA GTTGCCGGGGA TTTTTTTTAACGTCC 100 34 SFV_RS16975 NONE SFV_RS16980 3138720 .. 3138751 + -14.6 -4.30576 CTGGTAACTTCTCTG TCTATGAGAGCCGT TAAA ACGACTCTCATAGA TTTTACTAATAGCAA 100 34 SFV_RS16990 NONE SFV_RS16995 3140346 .. 3140370 + -14.3 -3.66578 TTAATCCTGCCTTGT TTGCCCGGCCA TCC TGACCGGGCAA TGTTCTTTCCTTTAA 100 37 tolC NONE SFV_RS17030 NONE SFV_RS17035 NONE SFV_RS17040 3148466 .. 3148493 + -14.2 -3.67558 GTTGAATAAGCCACG ATACCGGATGGC ACTC GCCATCCGGTAA TTGTTAGCCTATCTG 100 32 SFV_RS17050 3150216 .. 3150236 + -9.8 -3.31322 AAAACAACATCAGAA GTTGTCCA GCACA TGGACAAC TTCTGCCAGCTTCAC 74 40 SFV_RS17065 3152024 .. 3152060 + -6.2 -4.7033 CATTTGTCTTTAATG CACTGTAAATTATGA ATTAATCC TC-TAATTTACAGTG TTTTCTATTACATTA 78 42 SFV_RS17070 NONE SFV_RS17075 NONE SFV_RS17080 NONE SFV_RS17085 3155145 .. 3155167 + -8.4 -5.4251 TTTCAGCTATGAACG TCCCTGGC ACAAAAA GCCGGGGA TTTTTTATATCTGCG 100 43 SFV_RS17090 3155521 .. 3155543 + -8.4 -5.4251 TTTCATTAACACATA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG 100 68 SFV_RS17095 3156726 .. 3156743 + -7.7 -3.23979 TCACCGCGTTTACGC GCTG-CCG CTA CGGCCAGC TTCAGTTCCTCTTCG 61 522 SFV_RS17120 NONE SFV_RS17125 NONE SFV_RS17140 3166596 .. 3166610 + -3.5 -2.63479 GACCGTTCCCCAACT CCCAT ATTCC GTGGG TCATATCGCGCTCTT 43 351 SFV_RS17150 3168248 .. 3168258 + -2.4 -3.29144 AAAATCTGTCTCACA CCCG GAG CGCG TTATGAAAAAGATCC 45 40 SFV_RS17155 3168874 .. 3168893 + -9.3 -4.57073 TCAAATAACCCTCCC GGAGAGG CTCACC CCTCTCC TTTTTCGCAGGCATA 88 33 SFV_RS17160 3170553 .. 3170578 + -3.9 -5.243 GTACAAAATTCCGGA CGC-GCGTAGAA CAC TTCGCCGCGGCG TTTTTTCATCATTTC 84 201 rpsU 3171934 .. 3171960 + -10.9 -4.40882 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTATTTTCGTTTATG 90 73 dnaG 3173842 .. 3173854 + -4.8 -3.28269 CGTAATTATCGTTGG CGGT AAACA ACCG TTGGATTTCAGCGTT 54 125 SFV_RS17180 3175901 .. 3175926 + -9.8 -5.61596 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT 100 148 SFV_RS17185 3177245 .. 3177272 + -12.8 -3.14564 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTCCCCCGGTGA 86 8 SFV_RS17195 3178012 .. 3178033 + -14.5 -5.71295 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT 100 37 SFV_RS17205 3179868 .. 3179897 + -11.3 -3.57144 TTAATGCAGCACCGT CACCGCGTCTTCC AGTC GGCTGGCGCGGTG TTTCACCATCGCCGA 87 194 SFV_RS17215 3183176 .. 3183208 + -12.8 -4.82901 AGAAGCGTAATATCA AATCGGATGGCGAT ACGAC GTCGCCATCCGATC TTTTTATACGACGCG 100 31 SFV_RS17225 3184753 .. 3184795 + -7.8 -4.73614 ACCCGTTAAATCCCC TTACA-CACTGTCCGGCAA TCATTT TTGCCGGACAGTGCTGCCG TTTATTTTCGTGATC 85 32 ebgA NONE ebgC 3188505 .. 3188522 + -4.9 -3.61902 GCCACCGCTACCCTA CACATTT TCGG AGATGTG TTATGTCTGATACCA 57 68 SFV_RS17240 3189983 .. 3190019 + -8.3 -4.04922 TAAAAAATGAGCAGG C-ATTTTCCCTCTTCCT GGATG AGGA-GAGGGAAAATAG TTTCTGCCTTTATAT 78 50 SFV_RS17245 NONE SFV_RS17250 NONE SFV_RS17255 3193553 .. 3193564 + -7.2 -3.30243 ACGGCTGGCGGATGC GGCG TGAA CGCC TTATCCGCCCTACAT 63 47 SFV_RS17260 3195784 .. 3195818 + -10.6 -2.50816 GATTTAAATCGTTAT TTGAAGCGCCGGATGC AAC GCATCCGGCACGTCGC GTTAATCAATAAACA 74 34 SFV_RS17285 NONE SFV_RS17290 NONE SFV_RS17295 3200548 .. 3200567 + -10.8 -5.56673 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT 100 171 SFV_RS17300 3201889 .. 3201941 + -6.1 -2.73529 GTTCGCCAGAGCCTG GGGGTGCAGGGGGCG-GC-GGCGAC TGGCT GCCCCCTGCGCGCTCCCTGCGCCAG TGACTTTATATGGCA 53 276 SFV_RS17305 3203487 .. 3203511 + -12.1 -4.6468 TAATTAATTGTTTAA CCCCTTTCGTC TAT GGCGGGAGGGG TTTTCTCTACTTTAA 100 34 SFV_RS17325 3208833 .. 3208864 + -24.6 -4.03234 TAACGTAAGTTATAA CGACGAAGCCGCCT TATC AGGCGGCTTCGTCG TTTATATAGAAAAAA 100 45 SFV_RS17340 NONE SFV_RS17345 3214350 .. 3214369 + -10.7 -4.0942 GAAATTCCTGTCCGA CAGGCGC TGCAAT GCGCCTG TTTGTCTCGTCGGTA 86 39 SFV_RS17350 NONE SFV_RS17355 3215793 .. 3215820 + -10.6 -3.48924 ACTGTCTATGATTAA TGAGGCGGTGGT TAAC ACTACCGCTTCG TTGTCTGGACAATCG 81 88 SFV_RS17360 NONE SFV_RS17365 NONE SFV_RS17370 NONE SFV_RS17375 3217280 .. 3217298 + -12.4 -3.37071 GGTTAACTTCCCTCT GGCCGGAG CAA TTCCGGCC TTATCCCTCAAATTT 90 35 SFV_RS17380 3217780 .. 3217797 + -11.3 -4.87626 CTTAACGATAAAAAA CGAGGAG GAAG CTCCTCG TTTTTGCTATTGGAG 100 53 SFV_RS17385 3218814 .. 3218831 + -11.3 -2.8664 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATAATTAGCTA 78 31 SFV_RS17390 3219650 .. 3219667 + -9.9 -3.26842 TGTCAGCAGTCAGAA GCACCTT GTGA AAGGTGC TTAATAGATTATTTT 72 206 SFV_RS17400 NONE SFV_RS17405 3221584 .. 3221595 + -7.2 -3.30124 CAGGTTGCCGGATGC GGCG TAAA CGCC TTATCCGGCCTACAA 63 44 SFV_RS17455 3234068 .. 3234092 + -2.1 -2.80016 GGCGACGAATAGCAT TTTGTGTTGAG GAT CACAAAACGAA TAATTGCTGGTCGCC 40 58 SFV_RS17460 3234806 .. 3234820 + -2.9 -5.23396 CTTTTTTTCACCCGA TCATT TTAAT AATGA TTTTTATTGATTATT 76 1 SFV_RS17465 3236385 .. 3236398 + -9.5 -4.72846 CTCCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTATATCA 91 392 SFV_RS17505 3242546 .. 3242575 + -13.7 -4.50241 ACCGTTAATACGTTA CGGCGTTATCTGA CCTT TCAGATAACGCCC TTTTCCTTCCTCTTT 100 33 SFV_RS17510 NONE SFV_RS17515 3245168 .. 3245180 + -4.1 -3.44051 ACCCAGCGCACTATG CGGAT GCC ATTCG TTATAATGCTCGAAC 51 127 SFV_RS17525 3246009 .. 3246021 + -4.1 -3.85504 GTCCATATTCAACGG CTTCT TTG AGGAG TTCATTTTTCATCGT 56 96 SFV_RS17535 NONE SFV_RS17540 3248400 .. 3248416 + -6.5 -5.00616 ACGCCATGAATTTCT GCGGC CAGCGCC GCCGC TTTTTTCAGCGGCAG 83 129 SFV_RS17550 NONE SFV_RS17555 NONE SFV_RS17560 NONE SFV_RS17565 3252917 .. 3252946 + -12.1 -2.81208 CGATGCAAACCGTAG GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATGTTTTCCCTCAAA 79 94 SFV_RS17580 3255618 .. 3255628 + -8.2 -5.4833 CGGCCCACTCATCTG CGCG TGG CGCG TTTTTTCTTCCGTCA 100 287 SFV_RS17590 3256468 .. 3256479 + -4.4 -2.87132 ACATAGCCAATGACC TGAC CTTC GTCA TCTGTCGCCACCAGC 47 361 SFV_RS17605 NONE SFV_RS17610 3259266 .. 3259286 + -6.3 -3.18264 AACAACTTTAACTAT TCTTTAATG CAG TATTAAAGA TTAATCGGTAACAAA 57 93 SFV_RS17615 3260372 .. 3260396 + -8.5 -2.68823 CGCTGTCCTACGTAG GCCTGATAAGC GAA GCGCATCAGGC ATTGTGTAGGCAGCA 63 78 SFV_RS17625 3261818 .. 3261831 + -6.7 -2.72344 TTTTACAGATTGTGT TCGCT GTTC AGCGA TGATTACGCATCACC 55 9 SFV_RS17680 3275832 .. 3275852 + -8.9 -3.25356 GTAATTCGACATCAA CCCTGCCCT TCA GGGGTGGGG TTACCTTGCTTATCC 70 37 SFV_RS17720 3284016 .. 3284030 + -12.8 -5.13137 TGTTCGTTGATAAAA GGCCGC AGA GCGGCC TTTTTCCTTTCTTTA 100 118 SFV_RS17730 3286248 .. 3286266 + -13.1 -3.72051 TTAGTCAAAAAGAAA CCCCGGC GCATG GCCGGGG TTTCAGATTATTGAC 100 37 SFV_RS17755 3290534 .. 3290552 + -16 -2.7386 AATCCCCTCCCTTCA TCCCGCGC AGT GCGCGGGA TGATTCCAGTAAATT 100 39 SFV_RS17760 3291341 .. 3291356 + -5.4 -3.68351 GGCACATGCATAAAG CGGTTT TCAA AGACCG TTTCGGTGATGAACC 58 341 SFV_RS17800 NONE SFV_RS17805 NONE SFV_RS17810 NONE SFV_RS17815 NONE SFV_RS17820 NONE SFV_RS17825 NONE SFV_RS17830 NONE SFV_RS17835 3302314 .. 3302340 + -13 -3.93236 TTAGCATGTGCATGG CGGCCTGTTGTG CGG CACAACGGGCCA TTTGTACGGTTAATG 100 53 SFV_RS17840 3302907 .. 3302921 + -2.1 -3.28712 GTAGTTATTCGGTAA TGTCT CTTTT AGACG TTGTGAGGAGAAACA 45 37 SFV_RS17845 NONE SFV_RS17850 3304052 .. 3304073 + -10.3 -2.75963 CTTTAATTCTGGTTT TGATGAAGA TTAA TCTTCATCA CTTTGACATACAACT 71 13 SFV_RS17855 3304757 .. 3304780 + -6 -3.33525 GAAAGCACATTGATT CCACTGGCGAC CTA GTCGA-AGTGG TGTTGTCTGCGTAAG 59 11 gltB NONE SFV_RS17885 3316447 .. 3316485 + -7.3 -3.73146 GAAGTTTAAGCTCTG TCCCAGCGCCGCCTCCT CAGAA AAGAGTCGGCGCTGAAA TTCTCCTTTCTTTCT 68 32 SFV_RS17890 NONE SFV_RS17895 NONE SFV_RS17900 NONE SFV_RS17905 3318742 .. 3318756 + -8.6 -2.84732 TGTGCCAAAGATGGG TCAGGT CAC ACCTGA TCTAATAAATTTAAG 65 76 SFV_RS17940 NONE SFV_RS17945 3326780 .. 3326806 + -15.3 -3.23853 AAGTCATTAAAAAGA CAAAACAGGCC GCCTG GGCCTGTTTTG TATTACTTCACAACG 100 39 SFV_RS17975 3331130 .. 3331148 + -12.4 -2.83517 ACTAATTTATTTTTC GGGCGCAG CCA TTGCGCCC TCCTCTTCTCTCCCT 82 36 SFV_RS17980 3332650 .. 3332679 + -10.7 -3.11192 CGTTAATGTCGTAAA CCGGGCATCAGGC TGAC GTGTGATGTCCGG TTAACTCGTGGTATG 76 35 SFV_RS17985 3333819 .. 3333836 + -9.1 -5.64873 TGCTCAAAACAAAAA CCGGAGT CTGT GCTCCGG TTTTTTATTATTCGC 100 47 SFV_RS17995 3335705 .. 3335735 + -4.6 -3.30039 CCAGGAGCTTTAATC TCTGCCCCGTCG ATTCTGG CGGCGGGGAAAA TGTTGCTTATCCCTC 52 28 SFV_RS18000 3336358 .. 3336374 + -15.1 -5.78622 TTGTCCGACGATATT GCCCCCG GTT CGGGGGC TTTTTTTTGCGCTAA 100 53 SFV_RS18025 3341166 .. 3341180 + -4.2 -3.90744 CTGGCCCACGCCAAC CGGCAA ACT TTGCCC TTCTTTACCGCAGAC 58 213 SFV_RS18065 3351805 .. 3351821 + -10.9 -2.57985 CTTCCACCAGGCTTT GAACCAG CAG CTGGTTC TCCGTTCGCTTCTCA 69 216 SFV_RS18075 3354680 .. 3354691 + -4.4 -2.71924 TCGCACGCTGGTGAA GGTT AACT AACC ATTTAGCAAGGAATA 47 16 SFV_RS18085 NONE SFV_RS18090 3355250 .. 3355268 + -3 -2.98381 CTTACGTTATAAGAA GTTCCGTC GAT GATGGCGC TAATTTCGTGAATTG 42 13 SFV_RS18095 NONE SFV_RS18100 3357517 .. 3357533 + -13.7 -5.5112 GCAAAAGCGTCAAAA GGCCGGA TTT TCCGGCC TTTTTTATTACTGGG 100 45 SFV_RS18105 NONE panF NONE prmA 3360428 .. 3360442 + -6.4 -3.86202 CCATCTCAGAGGATT GGTCAA AGT TTGGCC TTTCATCTCGTGCAA 66 271 SFV_RS18120 NONE fis 3361828 .. 3361853 + -8.2 -5.29782 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC 91 55 SFV_RS18130 NONE SFV_RS18135 3363539 .. 3363558 + -5.7 -3.16191 CCATAATGCGTGCAC TGGCG-CG ACATC CGACGCCA TTCATGGCCATATCA 52 512 SFV_RS18145 3363930 .. 3363942 + -6.3 -2.63102 CAGACAGGTAAAAGA CGTTT CCC AAACG TCCTATAACGATAAT 53 5 SFV_RS18150 3365021 .. 3365042 + -13.7 -3.07233 TCGGTGTGAGGTAAC GAGCGTCGC TACG GCGGCGCTC TCTTCAGCGTTATGC 87 42 SFV_RS18155 3366218 .. 3366228 + -2.4 -2.71731 GAATATCTATAACCG CCGC ATC GCGA TCGTTGAACGCTAAG 40 1 SFV_RS18160 NONE SFV_RS18165 3368148 .. 3368167 + -13.6 -3.83214 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA 100 52 SFV_RS18200 3374850 .. 3374860 + -3.2 -3.96327 CACCATGCCAGAAAA GGAG TTT TTCC TTTCTGATAGAACAT 55 412 SFV_RS18235 NONE fmt 3379885 .. 3379903 + -2.2 -5.01535 TAGTCCACTCTTCTA AGCCCGGT CTT GCCGAGCA TTTTTATACTTATGA 69 41 SFV_RS18245 3381224 .. 3381238 + -3.6 -3.35679 ATAACGGGTCGCGAC TGATGA AAA TTATCA TTCTGGGTGCCGGCC 48 45 trkA 3382604 .. 3382631 + -15.8 -3.89938 CTTTCTTCTTGTAAT TAATAAGGCGTC TAAT GACGCCTTATTA TTTCCCTTTGATTAT 100 27 SFV_RS18255 NONE SFV_RS18260 NONE SFV_RS18265 3385849 .. 3385862 + -9.5 -5.54192 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT 100 452 SFV_RS18420 3400379 .. 3400391 + -4.9 -4.17789 GTTTGCTGATAGGCC GTTAA TCT TTAAC TTTAATTTGTGATTG 65 21 SFV_RS18480 3409020 .. 3409058 + -14.6 -4.29325 CCGCCACATTATTGA GGCGTAAAAAAAGCGGGG ATT CCCCGCTTTTTTGTCACC TTTTCGGTATTAGTG 100 26 SFV_RS18505 NONE SFV_RS18510 NONE SFV_RS18515 NONE SFV_RS18520 3416639 .. 3416657 + -6.7 -3.38046 GGCAGAGAGATCAAC CGCACGCG CAAC CGC-TGCG TCTTTCAGGTCGCGA 59 173 SFV_RS18530 NONE SFV_RS18535 3417896 .. 3417920 + -16.5 -4.86731 TTAATCCCGTCGGAG TGGCGCGTTAC CTG GTAGCGCGCCA TTTTGTTTCCCCCGA 100 37 SFV_RS18540 3420374 .. 3420402 + -3.9 -3.18849 AAAACGCTGGCGTTT CGCCTGAA-TGC CTTCCA GCACTTCAGGGG TATTGATGATATCAA 47 374 SFV_RS18570 3424899 .. 3424924 + -14 -3.25205 TCATTAATTGCTAAT GCCGGACGGC ACTATC GTCGTCCGGC CTTTTCCTCTCTTCC 93 34 SFV_RS18575 NONE nirD 3428027 .. 3428047 + -8.9 -4.68994 CGGTTAATGTTTTAA CGGGAGGCG CAA TGCCTCCCC TTTTTGCATGGTCCT 90 34 SFV_RS18585 NONE cysG 3430352 .. 3430369 + -11.3 -3.74762 CATTAATTTAACCCG GGCCAGA GAAT TCTGGCC TTCTTAATGACTCTT 91 35 SFV_RS18595 3430798 .. 3430821 + -13.2 -3.92887 GGTTTAATTGCCCGA CGCCCTCTGGA TTT TCC-GAGGGCG TATTTGTTTCTATGT 100 67 frlA NONE frlB 3433439 .. 3433460 + -12.9 -3.53343 AATATTAATCCCTCT CCCGGCCCG GCAA CGGGCCGGA TTTACGCAAGGAGTT 100 33 SFV_RS18610 NONE SFV_RS18615 3435100 .. 3435127 + -16.4 -2.80699 GCCTGGTAGGTATAA CGTTGGCGTGAG CATC TTCACGCCAACG TGCTGTTACTTGCCG 100 32 SFV_RS18620 3435936 .. 3435979 + -14.7 -4.18018 TTAACCGTAGGCCGG ATAAGATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCA-CTGAA TTTTACATCCCGCAC 100 37 mrcA 3456561 .. 3456574 + -9.5 -4.28774 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTCAGTTGGCTGA 84 33 SFV_RS18735 3459738 .. 3459772 + -18 -3.39142 TTATCGAATAACACG TTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAA TTGCTTCACTCTGGA 100 30 SFV_RS18740 NONE SFV_RS18745 NONE hslO 3461790 .. 3461813 + -16.8 -4.15106 TCATTAATGAGTATG TCCGGCAGAG AGGG CTCTGCCGGA TTTTACGACTTAATG 100 43 SFV_RS18765 3465690 .. 3465711 + -13 -4.46835 TTATAGAAAGCAAAA CGGGAGGC ACCTTC GCCTCCCG TTTATTTACCCTTCT 100 74 greB 3468508 .. 3468522 + -3.5 -4.56775 AGAGTCTTAACCTCC TGCCG ATGGC TGGCA TTTTTGCCAGCCAGT 64 44 SFV_RS18785 3470987 .. 3471009 + -17.8 -4.63218 TTGCCTGACATAAAA GTGCCGGAGA ATA TCTCCGGCAC TTTTATTCCACAGCC 100 105 feoA 3471554 .. 3471566 + -4.1 -3.1478 GGCCTTATTAGAAGT GGAAG CGG TTTCC TGTTAATACGGTGAT 48 7 feoB 3473903 .. 3473914 + -5.8 -3.29013 GCACCACCGGTGATT GCCA TTAA TGGC TTCACTTATTCAGGT 56 18 SFV_RS18800 3474173 .. 3474197 + -12.2 -5.08824 CGCCTGTTTTGAAAA GCCCGGTATGC GTTT GCAT-CCGGGC TTTTTTGCGTGCGGC 100 52 SFV_RS18805 3475253 .. 3475272 + -8 -2.5076 TCTCCAGACAACCAG TATCACTT AAAT AAGTGATA GTCTTAATACTAGTT 59 42 SFV_RS18810 NONE SFV_RS18815 3476573 .. 3476631 + -7.6 -2.62263 CAGTAGATACTCTAC CCTGCTTAAGTGCTACTTTGTGCTATCT TGC ATGTAACACAAAGTAGCACTTAGGGAAC TGATATGCAGACAGT 57 58 SFV_RS18820 NONE SFV_RS18825 3477574 .. 3477596 + -2.6 -3.65351 AACGGTTTTCTTCAA CGCCCGCGC ATCCTG GCGCGC-CG TTTCAGTCCCCATGG 49 335 SFV_RS18835 NONE SFV_RS18840 3479430 .. 3479463 + -8.7 -2.53581 CCCTCTTTTGTAGAT TGCCCGATGCGACGC TAAA GCGTCATTTCGGGCC TACGTTGAACATGTG 63 47 SFV_RS18845 3481229 .. 3481241 + -3.3 -4.93296 AAGCGTTGCGGAAAG CTTGC GTC GCCAG TTTTTATACTGGTAA 74 169 SFV_RS18860 3488941 .. 3488962 + -3 -3.81539 GGGGTGTGAGTTTAG CCGGAT AATGCATTGG ATCCGG TTTACATCTTTACAT 52 32 SFV_RS18875 3493390 .. 3493402 + -6.9 -5.12068 GCTCCGCCACTTTGC GGGCG ATG CGCTC TTTTTCTTCGGTCTG 90 519 glpD NONE SFV_RS18940 3510217 .. 3510247 + -3.1 -3.69323 TGGAACGCAATCATC CCAACGATGGCAC CAACA GTGCCGAGGATGG TTTCCATCATGGTCC 51 110 SFV_RS18970 3516117 .. 3516149 + -7.8 -3.13403 CAATCTAAGTTTGTC ATTTAAGCCCTCACC TACC GG-GAGGGCTTAAGA TATTAATACCCCGCC 64 49 SFV_RS18980 3518502 .. 3518533 + -8.6 -4.17556 CAGATGCAATCCACG CCCCAGCGCAGCAAC TCT GCCGC-GTGCTGGGG TTTATTGACGGTATA 78 73 SFV_RS19040 NONE SFV_RS19045 3529953 .. 3529963 + -6.8 -2.75294 GCCCTGCCGCGCGTG CCTG ACG CAGG ATTTGCCCCATTTCC 53 479 rsmD NONE SFV_RS19080 3536302 .. 3536312 + -8.2 -3.61268 GTCTGCTCCATTCCT CCGC TTT GCGG TTTGAAGCTTGCCTC 69 146 SFV_RS19090 3537321 .. 3537340 + -12.2 -3.01984 TCTGATAAAACTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTTCGGTTA 81 36 zntA NONE SFV_RS19105 NONE SFV_RS19110 3541463 .. 3541490 + -13.4 -5.52384 TTTAAGATGATGAGG CGGCCTCAGGGA CGTG TTCCGGAGGCCG TTTTTTTAATCGCCA 100 43 SFV_RS19120 NONE SFV_RS19125 3544537 .. 3544564 + -7.1 -3.91984 CAGAACAGGTAATCA GTATGACGAAT ACTTAA AATCGTCATAC TTATTTCCGCCATCT 70 71 SFV_RS19130 NONE SFV_RS19135 NONE nikC NONE nikD NONE nikE NONE SFV_RS19155 3549959 .. 3549987 + -14.9 -3.08133 AAGAAAAGATATTAA CTGAACTTAATTT ATA AAATTAAGTTCAG TTGCATAGATAGATC 89 60 SFV_RS19205 3560926 .. 3560952 + -8.1 -5.03145 AAAATTTACATAATC CCAGCGTTA TTCATATCT TAACGCTGG TTTTTTACGAACTTA 87 39 SFV_RS19220 3563710 .. 3563728 + -3.1 -3.38812 GTACCGCTATATACC CCTTTCA CTGGT TGAATGG TATTATTAACAACGA 47 496 SFV_RS19235 NONE SFV_RS19240 3566911 .. 3566941 + -5.5 -3.79251 AAGGCCCTGGCGGCA CAGAACGGGTAAA AATAA TTTGCCCATTTTG TTTAATAATAACCTG 61 471 SFV_RS19265 NONE SFV_RS19285 3575581 .. 3575602 + -13.7 -5.66684 TACGCACCAAAACGA GCGGGTCAG TTTA CTGGCCCGC TTTTTTTATGCGTTA 100 44 SFV_RS19295 3576820 .. 3576837 + -14.1 -4.77757 CGACGTGTTCCTGAA CGCCCGC ATAT GCGGGCG TTTTGCTTTTTGGCG 100 52 tppB 3578596 .. 3578621 + -19.1 -4.20806 TTATTCTTGCAGAAA GCAGGGTAGCG TTAT CGCTACCCTGC TTTACTTTTACACTG 100 41 SFV_RS19315 NONE SFV_RS19320 3583909 .. 3583935 + -16 -3.43217 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAATTACGTTTCCG 100 34 SFV_RS19330 3584373 .. 3584387 + -7.1 -5.47218 TGAAGAGTAAAAAAA CCGAC GCGAA GTCGG TTTTTTTACGTCCGG 100 160 SFV_RS19335 3585147 .. 3585168 + -3 -4.36914 AAAAATTTAGCTAAA CACATATG GATTTG CACATGTG TTTTATCCGGGAGGC 60 39 SFV_RS19340 NONE SFV_RS19345 3586971 .. 3586984 + -8.1 -3.30124 GTTTATGTCGGATGC GACGC TAAC GCGTC TTATCCGACCTACAA 65 82 SFV_RS19355 NONE SFV_RS19360 NONE SFV_RS19365 3589393 .. 3589428 + -9.2 -2.77132 ACAATAACCACGTAA TCAT-GCTTCTCTGACA TTT TATCGGAGAAGCAATGA CTCTTTGTCTCAGTA 66 189 SFV_RS19370 3591037 .. 3591059 + -2.8 -3.06183 ATAATACCATAATAT TGATTATTAG CAC TTTATAATCA TTGAATAAAAATAGA 43 29 SFV_RS19375 3591860 .. 3591884 + -13 -2.76322 AACACCACCGAAAGA TGCAGATGCT TTCTC AGCATCTGCA TCATGTATTACATAA 85 39 SFV_RS19380 3593025 .. 3593038 + -2.3 -2.62184 CAGCAATACGGCTGG GGTCG AGTC CGACG TGATCTAAAGACAGC 38 518 SFV_RS19400 3594902 .. 3594936 + -15.9 -3.26545 TACCCCGGTTGTCAC CCGGATCATAGTCAC TTGAT GTGACTATGATCCGA TTAATACTCTCTCCG 100 42 SFV_RS19405 3596374 .. 3596392 + -3.1 -6.02345 AATGCTGGCAGGAAC TGTTGGC AGAAC GGCAACA TTTTTTTTGTCGTTG 100 188 SFV_RS19415 NONE SFV_RS19425 NONE SFV_RS19430 NONE SFV_RS19435 3599733 .. 3599770 + -5 -3.27476 GGGTCAGTACAAAGT GAGGCT-ACCCTATG CCTGAACAC CATAAGGTTAGCCTC TTACTCGTTGGAAAT 52 56 SFV_RS19440 3599965 .. 3599984 + -13.6 -3.3482 AGAGTAAGAGTCTTC GGCGGGAA ATTA TTCCCGCC TTACTTACGGCGTTG 100 34 SFV_RS19455 3602080 .. 3602098 + -7.4 -3.90291 CAATAAAGAGTAAAA GCCCGA GCGATTA TCGGGC TTTACTTCACGCAGT 70 35 SFV_RS19470 3606614 .. 3606658 + -2 -2.85657 ACCCAGTTTTGCGCG TTGGCAAGATAGGCATCCCGC ACCA GCGGAATG-CAGTCACGCCAG TAATTCGCTTTTATA 41 295 SFV_RS19485 3608304 .. 3608318 + -6.4 -4.56775 TTCATTCCGTTCTGA TGGCAT TTC ATGCCG TTTTTCCCCAAGCAT 76 160 SFV_RS19490 3609691 .. 3609708 + -12.7 -4.88129 TGACTCGTAAAATTT GGGCCAG TTAA CTGGCCC TTTTTACTGCTTTTT 100 110 SFV_RS19495 3611700 .. 3611710 + -6.8 -3.13164 ATCTGCGCAGTAAGA TGCG CCC CGCA TTCGGTGATTGGCGC 59 104 SFV_RS19500 3611800 .. 3611818 + -14.6 -5.22039 GACCAAATTCGAAAA GCCTGCTC AGC GAGCAGGC TTTTTTGCATTTGAA 100 36 SFV_RS19505 3612348 .. 3612359 + -4.4 -3.35679 TTGACGTTTTCACAT TCTG TTGA CAGA TTGTAGGTCACGAGG 52 191 SFV_RS19510 3614233 .. 3614291 + -2.3 -3.87373 CAATGTATTGAATTT GCACGATTT-TGTAGGCCGGATAAGGCG TTAA CGCCGCATCCGGCATAAACAAAGCGCAC TTTGTCAACAATCTG 54 117 SFV_RS19520 NONE SFV_RS19525 NONE dppD NONE dppF 3618386 .. 3618404 + -9.5 -3.76402 CGTTAACTCACAAAA CCGGGGC CATGC GCTCCGG TTTACTCAATCAGCT 79 35 SFV_RS19545 NONE SFV_RS19550 3620311 .. 3620336 + -14 -4.72272 TTTGCGCCCGGACCA GGCCGCAGGG GTGAAA CTCTGCGGCC TTTTTCGTAAGAAAA 100 76 SFV_RS19555 3620794 .. 3620819 + -14 -4.72272 TTTGCGCCCGGACCA GGCCGCAGGG GTGAAA CTCTGCGGCC TTTTTCGTAAGAAAA 100 76 SFV_RS19560 3621277 .. 3621302 + -16.2 -4.81685 TTTGCGCCCGGATCA GGCCGCAGAG GTTAAA CTCTGCGGCC TTTTTCGTGCTTACT 100 76 SFV_RS19580 NONE SFV_RS19585 3625149 .. 3625175 + -5 -3.90744 AACCATGAGCGAAGC CGCTCGGCAGGA ATA TTTTGCCATGCG TTATTTGCGCAAACA 60 161 SFV_RS19595 NONE SFV_RS19600 NONE bcsA 3629211 .. 3629229 + -6.7 -3.64049 GCTCGGCTTCCGTGG CTACCGCC ATCT GGCGG-AG TTTGCGCCTTCTTCG 64 94 SFV_RS19610 NONE SFV_RS19615 NONE SFV_RS19620 NONE SFV_RS19625 3637246 .. 3637267 + -4.4 -4.7657 CTTTAAAAAGTGCTG GTTTGTGC GAGCCA GCTCAAAC TTTTTAACCTTTTTG 73 63 SFV_RS19630 3638745 .. 3638773 + -14 -4.52669 TAATTGCCCCCTGTG CCTGAACTTACC ACCTG GGTGAGTTCAGG TTTATTTCACTTCTT 100 91 SFV_RS19635 3640643 .. 3640656 + -3.1 -5.27335 GAGTCGCCAGCTGCG GTGGT ATCG ATCAC TTTTTCTTTCGGCAG 82 272 SFV_RS19650 3642411 .. 3642426 + -5.4 -3.08032 GAATACGGCGGTTCT GGC-GCT ATA AGCTGCC TCATTTTCCGCCGGG 52 16 SFV_RS19655 3644550 .. 3644589 + -10.2 -2.9916 GCAGATGAAGAAGTG ATG-ATAATTGCCGGATGT CTG ACATCCGGCAATTAAACAG ATTTAGATTTTTGGC 73 25 SFV_RS19675 3649555 .. 3649580 + -16.3 -3.90762 TCCTCCTGAAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG 100 32 SFV_RS19690 NONE SFV_RS19695 3654028 .. 3654044 + -3.6 -3.65351 CAAATCCAGAAATCA CGGCGT CCAAT ACGCCC TTTAAATGAGAATAA 53 399 SFV_RS19705 3654828 .. 3654848 + -5.4 -3.41962 ACTGTTTCACAGACC T-GCTGCCC TGCG GGGCGGCCA TCTTCCTTTATTCGC 56 76 SFV_RS19710 3655662 .. 3655684 + -13.5 -3.6187 GCTTAAGTCTGACAG GTGCCGGAT TTCAT ATCCGGCAC TTACTTTCCTTAACT 100 35 SFV_RS19740 NONE cpxA 3662780 .. 3662796 + -12.3 -2.91395 GTTGCCGCTGTATAA GCGGAGT TAA ACTCCGC ATTTGTAGGCAGGAT 82 16 SFV_RS19755 NONE SFV_RS19760 3665159 .. 3665175 + -6.5 -3.14132 AGTCACAATGACCGC CGTCGCT ACC AGCGAAG TTGCTGCCGGAGCCA 54 160 SFV_RS19770 3666545 .. 3666559 + -5.6 -4.6902 CCAGCCGGAACCAAA GCGGGA AGC TGCCGC TTTTTCAAATTCTGC 75 315 SFV_RS19780 3668248 .. 3668281 + -6.7 -3.55444 TAATCTTTCTGCGAA TTGAGATGACGCC ACTGGCTG GGCGTCATCCCGG TTTCCCGGGTAAACA 62 38 rhaB NONE SFV_RS19805 NONE SFV_RS19810 NONE SFV_RS19815 3674401 .. 3674426 + -13.3 -3.78026 TGCCGTAATTGCCCA ATGTGCCGGAG ATGC CTCCGGCACAA TATTTTAAATTTCGA 100 33 SFV_RS19820 NONE SFV_RS19825 NONE SFV_RS19830 NONE SFV_RS19835 NONE SFV_RS19840 3679074 .. 3679108 + -11.6 -4.50193 AATTCACGAAATGAA TAAGTCCTGCAATTTA ATA TATATCGCAGGACTTA TTTTAATTAATTGCT 100 56 SFV_RS19850 NONE SFV_RS19855 NONE SFV_RS19860 NONE SFV_RS19865 NONE SFV_RS19870 3685714 .. 3685729 + -3.2 -3.00923 GGATTACAGCTCATA GGGTGT GACG ACACCA TCTCTCGTATTCCGC 45 74 SFV_RS19875 3685973 .. 3685984 + -3 -5.09426 ACGTTGTCAGCAATC TGAT TGAC ATCA TTTTTTCCCATTACC 73 19 SFV_RS19890 3687183 .. 3687220 + -9 -3.38272 CGGGTCATAGCAAAA CTCCTGAGCAGGCGGC CACTAT GCCGCTTTCACTGGAG TTCTGAATACTGGTA 71 131 SFV_RS19910 NONE SFV_RS19915 3689919 .. 3689931 + -3.5 -3.02461 GAATAACTTTCTTGT TTAAT GAG ATTAA TATTGGCAACCATTA 45 195 SFV_RS19950 NONE SFV_RS19955 NONE SFV_RS19960 3698372 .. 3698402 + -11.3 -3.35992 TGCAGTTTTTGGGTT TGACAT-CAGCCTC ACGG GAGGCTGTATGTCG TTAATTAAGGTGCCT 83 114 SFV_RS19965 3699425 .. 3699435 + -2.6 -3.01857 ACAGCTCAGCTTCTG TAAA GTT TTTA TATATCAGTTTTATG 43 127 SFV_RS19970 NONE SFV_RS19975 3703003 .. 3703016 + -9.5 -3.30619 AATAATAATAAACGA CGCCC TGCG GGGCG TTATAAGGAGTGATT 74 39 SFV_RS19980 3704466 .. 3704480 + -7 -2.64472 TATTTCCATCCTGGT GGGTGG CGG CCTCCC TACGTTTAAAAAATG 55 2 SFV_RS19985 3705341 .. 3705360 + -5.7 -3.16191 CCATAATGCGTGCAC TGGCG-CG ACATC CGACGCCA TTCATGGCCATATCA 52 512 SFV_RS20015 3710106 .. 3710126 + -5.3 -4.1899 TCGTCTTTCGGTGCG CGGTTGGCG CGG CGACGATCG TTTTCCGTCAGGTGA 65 96 SFV_RS20025 NONE glnA 3713753 .. 3713770 + -7 -5.28176 CCGTGGAAACTTTCA GCCCAT CTCTGC ATGGGC TTTTTTCTCCGTCAA 87 86 glnL NONE glnG 3716368 .. 3716391 + -6 -3.93038 AAGATTGATTATTGA GCGCAAATTG CTGG TATTTTGCGC TTTACTGTTCCGATA 66 58 SFV_RS20045 3716606 .. 3716659 + -12.5 -2.57931 TAGGCCTGATAAGAC GCGACCAGCGTCGCATCAGGCATC ATGCTCA GATGCCTGATGCGGCG-TAAACGC CTTATCCGGCCTACA 81 75 SFV_RS20060 3720089 .. 3720115 + -7.2 -2.55392 TCTTGCCTTAATGCT TGTGCCGGATGT GGC GTATCCGGCCCG TAAATTCAATAGATT 57 44 SFV_RS20070 3723573 .. 3723583 + -8.2 -4.00756 TTTCTGCTAAAATCT GCGC CTT GCGC TTCTTTAGTGCACTG 74 116 SFV_RS20075 3724537 .. 3724570 + -14 -3.73042 TCAGAATAAGTAAGT TTTACTCGCCTCTG AATGAG CAGAGGCGAGTGAG TATTTTAATGAACAA 100 28 mobA NONE SFV_RS20120 3730306 .. 3730327 + -8.7 -3.91196 GCTAATTCTGTTTTA TCAGACCGC TTCT GCGTTCTGA TTTAATCTGTATCAG 76 257 fadB NONE fadA 3743269 .. 3743287 + -9.5 -5.76633 TTAGTTGCCGTTCTT CCCGCCT GTCAG GGGCGGG TTTTTTTATATCTCA 100 186 rfaH 3746354 .. 3746370 + -5.1 -3.65199 GAGATCGCGCGGGAG CAGATAC GGC GCATCTG TTTCGATCAGCAATT 58 184 SFV_RS20235 3755185 .. 3755205 + -16.9 -3.84451 TGTAATGAGAAAAGA CCGGGTGGT ATT ACCACCCGG TTTGGATTTACCCCC 100 36 SFV_RS20245 3759118 .. 3759130 + -6.2 -3.24188 AAAAGCATAGCCCCA GCGC AGACG GCGC TTACTCATGATGTCA 57 480 rhtB 3762096 .. 3762125 + -14.3 -3.25823 TGCGTGAAAAATAAT GTCGGATGCGGCG TAAA CGCCTTATCCGAC TTACTCTGAAGACGC 95 34 SFV_RS20285 3766307 .. 3766319 + -4.8 -3.06261 GTTGAAGACATAAAA GCAG GTAAA CTGC TGTTACCAATTAAAA 51 36 SFV_RS20290 3767264 .. 3767289 + -8.3 -3.07043 TATTCTGAAAAAATA TGCCGACTCTT GTAT GAGAGTGGGCA TATTGCCATGCTGAC 66 51 SFV_RS20295 NONE SFV_RS20300 3768107 .. 3768133 + -15.2 -2.53831 GAGCCTTTGAATAAC AGGTGGCTTAGC CAG GCTAAGCCACCG CCTTCTTTTTACAAC 93 31 SFV_RS20315 3769802 .. 3769827 + -16.3 -3.90762 AGCAGAAGGTGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG 100 30 SFV_RS20325 3771713 .. 3771724 + -7.2 -3.30243 GCTGATGCCGGATGC GGCG TAAA CGCC TTATCCGGCCTACAT 63 74 SFV_RS20360 NONE SFV_RS20365 NONE cyaY 3781200 .. 3781220 + -6.8 -4.30987 GTGATTGGTTTCAAC CTGCACTG ACAAG CCGTGCAG TTTGTTATGCGAAAT 75 449 hemC NONE hemD NONE SFV_RS20390 NONE SFV_RS20395 3787874 .. 3787899 + -6 -2.98447 ACAGTAGTTCCTTCT CACCCGGAGG AAAGCA CCTCCGGGAC CTTTCTGATGCATAA 55 34 SFV_RS20405 NONE SFV_RS20410 3790102 .. 3790120 + -5.2 -5.37865 GGCAATCAACCGCAG GCGGCT TCCAAAT GGCCGC TTTTTTACTTATTCA 87 172 SFV_RS20530 3810019 .. 3810032 + -5.3 -2.73364 ATGAATCCCGATGAG CTTAC TGTA GTAAG TGATTCGGGTGAAAG 49 91 SFV_RS20535 3811782 .. 3811797 + -10.4 -3.90922 CCGGGCGCACCAGTT CGCCGT ACTG ACGGCG TTCTTTACACAGCGT 81 236 SFV_RS20545 3814486 .. 3814519 + -5.3 -4.1413 TCCTGCTCGCCGATT TTGCCTTC-ATACTGC GGC GCGGTTTCGAAGGCGG TTTTGCCGGTCTCTT 65 504 SFV_RS20555 3816963 .. 3816982 + -3.4 -4.62069 CGCGGCTCAGGCGCA CGCCGACA AAGA TGCAGGCG TTTTTGGCATCGGCA 68 420 SFV_RS20590 3824997 .. 3825009 + -6.2 -5.15167 ACTGACATAAAAAAA GGGC ATTTC GCCC TTTTTATTAATCGTC 83 31 SFV_RS20600 3826381 .. 3826400 + -10.8 -3.00946 TTCAGATAAAAAAAA TCCTTAGC TTTC GCTAAGGA TGATTTCTGGCAGGG 76 94 SFV_RS20635 NONE SFV_RS20640 3834274 .. 3834287 + -4.5 -2.60079 GTTGTAATCGTTGTT GCTGA AGGG TCGGC TGGGTTATCCGATGG 45 41 SFV_RS20775 3861307 .. 3861321 + -4.9 -3.25304 CACACAGACAATAAA CGGCC CGCGC GGCTG TTCATCGTAATCTTT 49 519 SFV_RS20790 3865243 .. 3865270 + -12.8 -3.14211 ACAGCCCCGAAAAAG AGCCAGTCAGTT GCTT AACTGACTGGCA TTACTGCCGACCGGT 86 8 lpfA NONE lfpB 3866980 .. 3866992 + -4.1 -3.44051 ACCCAGCGCACTATG CGGAT GCC ATTCG TTATAATGCTCGAAC 52 111 SFV_RS20805 3867821 .. 3867833 + -4.1 -3.70007 GTCCATATTCAACGG CTTCT TTG AGGAG TTCATTTTCCATCGT 53 96 SFV_RS20815 NONE SFV_RS20820 3871880 .. 3871903 + -4.7 -2.63112 CGCTAATAGGTCTGA CAACGATTGT TCATC ACA-TCGTTG TCATCTCACCCATTT 46 35 SFV_RS20825 3873139 .. 3873150 + -7.2 -2.82635 ATATTAAAGACAGTA GCGG TAAG CCGC TGTACTAATAAAACT 58 6 pstC NONE pstA NONE SFV_RS20840 NONE SFV_RS20845 3876709 .. 3876739 + -14.3 -3.63054 AAATAATTCACCAGA CAAATCCCAATAA CTTAA TTATTGGGATTTG TTATATATAACTTTA 100 35 SFV_RS20850 3877883 .. 3877900 + -4.1 -2.91328 AACCTGAAAAAAATT GCTTGAT TCAC GTCAGGC CGTTTTTTTCAGGTT 46 86 SFV_RS20855 NONE SFV_RS20860 3881270 .. 3881295 + -12.7 -2.64572 GCACCTTAATTATCG TCGCATTCAGA ACAG TCTGGATGCGA TACGTTAATTCTTTC 81 49 SFV_RS20865 NONE SFV_RS20870 NONE SFV_RS20875 3884888 .. 3884915 + -8.5 -3.39438 AAGCTGAAGAAATAA GGCCGGA-TGTA TGAAT TACGCTCCGGCC TGTTCTCATTATTTA 69 39 SFV_RS20910 3890368 .. 3890392 + -6.4 -5.65927 ATAGCGCATTAAAAA CCCGCCATGCA TGAT TAC-TGGCGGG TTTTTTATTTAGATC 100 46 SFV_RS20930 NONE SFV_RS20935 3893716 .. 3893731 + -4 -2.98493 TGGCATCTAAGGAAT CGTAAT CCCA GTTACG TAGTTTGATGGTCGC 47 312 dnaA NONE SFV_RS20995 NONE recF NONE gyrB 3909191 .. 3909214 + -3.1 -3.75024 AATGGCGTTAACCAT GCG-AGCGTG CCTGA TGCGCTACGC TTATTAGTCCTACGA 53 39 SFV_RS21010 NONE SFV_RS21015 3909825 .. 3909850 + -6.1 -4.19258 CGCTAAGCAAATGGG GAGCATGCAAC CCGC GTTGCATCCCC TTTTCCCTCGGGTGT 70 35 SFV_RS21020 3910739 .. 3910789 + -16.4 -3.57418 AAGTATGTGCTGAAT TAATCTGTGGGCGGGCAAACAGC ATAAAC GC-GTTTGCCCGCTTACTGATTA TTGGTTTACTGCATA 100 23 SFV_RS21030 NONE SFV_RS21035 NONE SFV_RS21040 NONE SFV_RS21045 NONE SFV_RS21050 NONE SFV_RS21055 3916498 .. 3916519 + -9.4 -4.87807 ATCCACTTTCTTAAA GCCGGTGC GGTCAG GCATCGGC TTTTTACTATCTTGC 95 80 SFV_RS21065 3918861 .. 3918915 + -9.5 -3.24232 GCCGGTGGAATAACC GCATTGGTG-GCTTGCGCGTTGG CTTCGCTTTTT TCAACGCGCGAGCGCACCGA-GC TGTCTTTGCGGAACA 67 61 SFV_RS21075 3919930 .. 3919959 + -2.1 -3.25169 GCTCGCCGTCAGGGA GCATATGCGAATC TTCG GATTTGCAGGTAC TTACTCGCTTCTTAG 44 78 SFV_RS21080 3920433 .. 3920453 + -14.7 -5.90231 CTAGCTATTCTCTTT GCCCCGCCA TTC TGGTGGGGC TTTTTTTGTCTTTCT 100 41 SFV_RS21090 3922744 .. 3922767 + -5.9 -3.72695 GCCGTTTTAACACCT CCACCAGTC CGGTCA GGCTGGCGG TTTGATGCAGCACAT 63 495 SFV_RS21100 NONE SFV_RS21105 3925713 .. 3925745 + -11.3 -3.90922 GAGTTACGTTAATTG TGTGGACTGGCATCC GTT GGGTGCTGGTCCGTA TTCTTTAGCACGGCT 91 205 SFV_RS21115 3928508 .. 3928523 + -4 -3.26471 TGACCGATACCCAGG CC-ACCA ATA TGGTCGG TTGCTATAGCGGTAA 48 52 SFV_RS21120 3929965 .. 3929991 + -8.7 -3.64259 AAATTCTGACGATAA TGCCCGCTG ATGATCACC CGGCGGGCA TTATTCAGGCTGCTT 72 32 SFV_RS21130 NONE SFV_RS21135 3931222 .. 3931238 + -2.2 -2.80016 TTATTGAGAGAGTCG CATGAC AGGAA GTCAGG TCATTGATGCTGAAG 40 21 SFV_RS21140 3932097 .. 3932108 + -2.2 -4.15044 CGACTGCCACATCAA CGTT GAGA AGCG TTTATTAGGACGCCC 58 402 SFV_RS21165 3933972 .. 3933996 + -10.7 -4.98531 CACACGATTCCAAAA CCCCGC-CGG CGCAAA CCGGGCGGGG TTTTTCGTTTAAGCA 100 53 SFV_RS21170 NONE SFV_RS21175 3936055 .. 3936079 + -12.2 -6.06723 AGGCTTGAACAACAT CGCGCTTATC GTTAA GGTAAGCGCG TTTTTTTTTACCCGC 100 48 SFV_RS21180 NONE SFV_RS21185 NONE SFV_RS21190 3939628 .. 3939650 + -2.7 -3.55444 TGCTGATTTTTACAA TGCATGCCT CACGC AGGTATTCA TTTCAGGAGTAACCC 48 125 uhpT 3941076 .. 3941094 + -9.5 -5.95946 TAACTGGTGACTTTT GTCCGGC ATGAC GCCGGGC TTTTTTTATTATTCC 100 44 SFV_RS21205 3944405 .. 3944431 + -2.4 -2.65264 GGTTTCCAGATATCA TGAGTTCT GATTACGCAGG AGAACTCA TGATCTGGATAATGC 39 52 SFV_RS21210 3944872 .. 3944888 + -2.9 -3.97088 GCCGAGGGCGTTCAC TGGTTGC ATT GAAACCG TTTCGTCTTATCAGC 54 14 nepI 3946307 .. 3946321 + -2.8 -3.70773 TAAAGAAGCGTTGGT CAGTAG TTG TTGCTG TTCTTACATATCCGG 50 48 SFV_RS21230 NONE SFV_RS21235 NONE SFV_RS21240 3948388 .. 3948401 + -6.7 -2.66435 GTACAGAGGTGCACG CTGTC CCCA GACAG TGGTATAGTCACGGT 52 113 SFV_RS21270 3957757 .. 3957769 + -3.3 -3.79506 TTTACCATTAATATT CAGCG TTG CTCTG TTATTAAATTTCATT 53 218 SFV_RS21275 3959287 .. 3959310 + -7.4 -6.24157 ATGGGGTATTCCCTC CGCCGGCA CTATGTGT TGCTGGCG TTTTTTTTTATCAAT 100 249 SFV_RS21295 NONE SFV_RS21300 3961476 .. 3961495 + -8 -2.5076 TCTCCAGACAACCAG TATCACTT AAAT AAGTGATA GTCTTAATACTAGTT 59 58 SFV_RS21305 NONE SFV_RS21310 NONE SFV_RS21315 NONE SFV_RS21320 3964207 .. 3964236 + -2.3 -4.62069 TAAATAACCTGATAC TGTTGTGTGTTTTC AAA GAAAACACA-GGTA TTTTTCACATAAACC 66 176 SFV_RS21330 NONE SFV_RS21335 NONE SFV_RS21340 3966195 .. 3966205 + -5.4 -2.55253 AAGTAGTTCCGGGAC CAAC ACC GTTG TCGCTTACGGTTACT 47 185 SFV_RS21350 NONE SFV_RS21355 3968450 .. 3968466 + -5.2 -3.91144 TACCAGTCCTGTGAC TCAATG AAATC CATTGA TTTATCGAATATAAA 61 499 SFV_RS21380 NONE SFV_RS21385 3975998 .. 3976030 + -9.7 -2.67021 GTAATCTATTGACGG AATGCCGGGTACGTC TGA GTCGTACCCGGCGAG ATTGATGTTTACCGC 68 37 SFV_RS21400 3981043 .. 3981062 + -10 -4.36914 TTGCAGGCGAATTTG CGCCGTTT TAGA AAGCGGCG TTTTGTAGAGCAGCA 90 323 ligB 3988568 .. 3988578 + -5.4 -3.19157 GCCCAGCAGATCACA GGTT TTG AACC TTAGTGACCTTCGTG 54 11 rph 3992247 .. 3992264 + -11.3 -6.06529 CAAACTGATTTTTAA GGCGACT GATG AGTCGCC TTTTTTTTGTCTGTA 100 33 pyrE 3992954 .. 3992977 + -16.8 -2.77523 GCGTTTAAAGAAACT CGCCGGATGA AAAG TCATCCGGCG TCATATTACTGCAAC 100 33 SFV_RS21475 3996195 .. 3996208 + -6.7 -4.2074 TAACCCGCTATGCGC GATCC TTCG GGATC TTTGTCTGTTCGGGA 72 38 rpmB NONE rpmG 3996838 .. 3996873 + -16.4 -2.90194 ATTCTCGCTTTGATG TAACGAAAAACCTCGC TCCG GCGGGGTTTTTTGTTA TCTGCTTGCCCCCAT 100 40 SFV_RS21490 3997781 .. 3997802 + -8.1 -3.28712 ACGCTACGCTAATTT TG-CCATCAG CGC CTGATGGACA TTCTCCGGCAGGAAA 65 76 SFV_RS21505 NONE SFV_RS21510 4000543 .. 4000559 + -2.3 -2.90723 ATTTGATTGATTTCT TTATTGA AAA TCAACAA TGTGCTTAAAAATCA 41 204 SFV_RS21515 4001761 .. 4001774 + -3.8 -3.48342 TACTGCCCTCCTCCA CGAC AGGTAC GTCG TTATGATCGTTGCTT 52 6 SFV_RS21520 NONE SFV_RS21525 4003704 .. 4003714 + -2.6 -4.18197 TAACCCGTAACTTAT TTTT GCC AAAA TTTTGGATACAGAAT 58 38 SFV_RS21530 NONE SFV_RS21535 NONE SFV_RS21540 NONE SFV_RS21545 4007671 .. 4007687 + -7.9 -6.04324 TTGAATAAATAAAAA GGCCGCA TTA TGCAGCC TTTTTTATTTTTTAC 100 33 SFV_RS21570 4013094 .. 4013123 + -13.1 -4.99035 ATGCCAACTGAGATA GGAAAAATGATGC TTTG GCATCATTTTTTC TTTTTATATCAATGC 100 70 SFV_RS21575 NONE tdh 4015565 .. 4015582 + -12.7 -4.53303 GATTAACACGAACAA GGGCTGG TATT CCAGCCC TTTTATCTGAGGATA 100 35 SFV_RS21585 NONE SFV_RS21590 4017399 .. 4017417 + -3.7 -2.63073 AGTTGGAGTCATTAC CCGGTGC GCAAA GAGCCGG ATATTCTTACCCGCC 44 40 SFV_RS21595 4017779 .. 4017799 + -8.2 -4.59109 CCACGGAACGGATTA CGCGGTGC ATCAG GCACAGCG TTTTTCGGCGGTGTA 88 199 SFV_RS21625 4022918 .. 4022930 + -5.5 -4.07687 ATTGTTATAAGCTTC TGGGG ACA CTCCA TTTTGCAGCCGCCCT 65 99 SFV_RS21630 NONE SFV_RS21635 NONE SFV_RS21640 4024812 .. 4024841 + -11.5 -3.56987 CCTTTGTTACCGCTA TGACCCGGCCCG CGCAGAA CGGGCCGG-TCA TTATCTCATCGTGTG 87 51 cysE 4026069 .. 4026088 + -5.6 -3.40403 ACTCGTGATAGTCCA GC-CCCGCG CGG CGCAGGCGC TTGTCGTCCCAGGCA 54 407 SFV_RS21695 4037594 .. 4037612 + -8.2 -4.10855 GCAGGTAGAGGGGCA GTAAGCAG ACG TTGCTTAC TTTTGAAAGGCTTTT 74 22 SFV_RS21715 4042245 .. 4042260 + -4 -3.41416 TTCCACGTTCCCGGA GATCTA ATTA TGGATC TATTGATTGTTTTAA 50 19 SFV_RS21720 NONE SFV_RS21725 4044074 .. 4044096 + -5.5 -3.14463 GTGGTTATGTTAAAC GCCCTTCTC CGTGT GAGAGGGCC TTGATCAGCCAGGTT 54 81 SFV_RS21730 NONE SFV_RS21735 4047409 .. 4047435 + -8.1 -5.13741 ATGATTTTAAATAAA GCACATTGTTT AATGA ATACAATGTGC TTTTTATTAGATTAA 87 86 SFV_RS21740 4048705 .. 4048725 + -13.3 -3.3878 TCATCATTCCAACAA CGGCTGGCA AAT TGTCAGCCG CTTTTTCAACTATCT 95 41 SFV_RS21745 4050433 .. 4050446 + -8.1 -3.4252 TTCATTGCCTGATGC GACGC TTAC GCGTC TTATCATGCCTACGG 67 66 SFV_RS21755 NONE SFV_RS21760 4052410 .. 4052462 + -11.4 -2.72043 ATCATTAATCTTCGC TTTCCGCC-GCTTGTTCAGGCCGCAG TTG CTGCGAC-TGAGCAAGCTGGTGGCGA ATTTCACGCAGCATT 77 33 SFV_RS21770 4053778 .. 4053792 + -7.2 -4.27483 TTTTAGCGATAAGGT GATATC ACC GATATC TTTAATTTTATCGAT 72 69 SFV_RS21780 4054988 .. 4055005 + -4.7 -4.8622 GAGTTTTACCTTTGT CACCGGC GTGA GCTGGCG TTTTTAATTCACCGG 73 1 SFV_RS21795 4059730 .. 4059755 + -2.5 -4.58395 ATTCTTCGAGTACTA CGGCGTT-ATGC ACG GCATCGGCGGCG TTTTTACCCCATGCG 63 191 SFV_RS21855 NONE SFV_RS21860 4069748 .. 4069760 + -9.1 -3.54741 GCCCCGGCACCATCA GCACG CCG CGTGC TTTCAGGCGCTGATA 71 337 SFV_RS21880 4074207 .. 4074236 + -10.1 -4.26903 ATTTCATTTCCTCGA GCCTTATCTGATT TGTC GGTCGGATAAGGC TTTTGCTCGCATCAG 85 40 SFV_RS21905 4080999 .. 4081027 + -9.6 -5.40072 ACTGTGCAGTCCGTT GGCCCGGTTATCG GTAG CGATA-CCGGGCA TTTTTTTAAGGAACG 100 47 SFV_RS21910 4082510 .. 4082533 + -8.8 -2.75039 ATGGCGTAAACGTTA TCCCCTGCCT GACC GGGTGGGGGA TAATTCACATCTATA 64 32 SFV_RS21915 NONE SFV_RS21920 4083506 .. 4083531 + -6.1 -4.43477 GAATAATTCACGTAA GCCCGGTCA GTCCAATG TGAACGGGC TTTTACTTAACTCAC 73 35 SFV_RS21930 NONE SFV_RS21935 NONE glyS 4088110 .. 4088127 + -12.7 -5.1861 CGCCGTTATTAAAAA GCCTGCC ATCT GGCAGGC TTTTTTGGTAATGAC 100 44 SFV_RS21955 NONE SFV_RS21960 4092513 .. 4092546 + -14.8 -3.78953 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAAG GTTCAGCCTTACTC TTTCCTGCTAACCAT 100 37 SFV_RS21990 NONE SFV_RS21995 4100012 .. 4100052 + -10.3 -3.35224 GCTCCGCTGTCATAT GGCCCGGTCGGCGACGTAA ATG TTTCGTCATCTGCCGGGTC TCTTTCAGCAACTGT 72 56 SFV_RS22020 4105177 .. 4105192 + -10.4 -4.3953 GTAACGCAGAAAAAA GGCACC TTGC GGTGCC TTTCTTATCATTCAA 87 87 rpmE 4113497 .. 4113510 + -9.5 -5.64274 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGA 100 45 SFV_RS22075 NONE metL 4118670 .. 4118692 + -8.4 -5.42605 AGTTTATATTTGCAG TCCGGTTTGC TTT GCATATCGGA TTTTCTTTTTCTTAC 100 176 metF 4119833 .. 4119871 + -10.4 -2.60392 GCTGCCTCGAAATGA GGGCGGGAAAATAAGGTT GTC AGCCTTGTTTTCTCCCTC ATTACTTGAAGGATA 70 100 SFV_RS22095 4122277 .. 4122309 + -21.5 -4.41616 CTGTAATCTGACCTT CTTCAGCGACTGTCT TTC AGGCAGTCGCTGAAG TTTCTTTACCGGCGT 100 35 SFV_RS22100 4123544 .. 4123578 + -3.5 -3.80083 AGGTTTCCAGATTAG GCACCC-GACGGTGAT CGAT GTTGCTGTCCGGGCGC TTTAACTTCCATTTT 56 303 SFV_RS22135 NONE SFV_RS22140 4130204 .. 4130221 + -10.5 -3.27525 CGCTTAAGTTCTTCT CCCGCTC GCAA GGGCGGG TTCGCTTTCCCACAG 74 34 pflD NONE SFV_RS22150 NONE SFV_RS22155 4134221 .. 4134245 + -6.3 -4.52347 TATGCGTGGGCCGCG TCGGGCGACGT GTT GCTTCGCCAGA TTTTGATATTGTTTG 74 516 SFV_RS22180 NONE SFV_RS22185 4142738 .. 4142761 + -5.2 -3.28001 AGCTTAAGTTTTGTT AGCCGG-AGGC GCA GCTTTCCGGCA TTGAATTTCAAAATA 54 34 SFV_RS22190 4144332 .. 4144357 + -9.8 -5.61596 GTGGCTGTGTAAGAA TCCGGAAACG CTCACT TGTTTCCGGA TTTTTTTATGCACAT 100 194 SFV_RS22195 4145846 .. 4145863 + -2.1 -4.43283 CAATACACATTTTAA TTAATTG AATA TAATTAA TTTCTATTTCTGTGC 59 178 SFV_RS22200 4147305 .. 4147325 + -2.5 -2.82162 AAGATGGCACATTGT TGAACTGGT AAT AACGGTTCG CTTAATTATTTTCTG 41 15 SFV_RS22205 NONE SFV_RS22210 NONE SFV_RS22215 4149642 .. 4149700 + -8.6 -3.20307 TGATAGGGATAATCG TTCATTG-CTATTCTACCTATCGCCATGA ACTA TCGTGGCGAT-GG-AGGATGGATAATGAA TATTCGTGATCTTGA 67 227 SFV_RS22220 4150782 .. 4150804 + -5.7 -4.11216 AATACCCAGAATCTC TTTTGTTTC CCGAT GGAACAAAA TTTTCAGCGTGCCCA 65 194 SFV_RS22230 NONE SFV_RS22235 4153332 .. 4153363 + -15.2 -4.41494 TGCTGAGTAATCGGT ATCATGCCGGATGC TGGC GCATCCGGCATGGG TTTTACTTCGCGGTC 100 31 btuB 4156687 .. 4156722 + -14 -3.41125 CCTTCTGAACCACGT CCCACCG-TGCTGGTGT TTG ACTCCGGCGTCGGTGGG TTGTCGGTCTATGAC 100 33 SFV_RS22250 4157504 .. 4157524 + -5.5 -3.21276 GAATGTTGCGCGGTC GGAAAATTA TTT TAAATTTCC TCTTGTCAGGCCGGA 54 48 SFV_RS22255 NONE SFV_RS22260 4159593 .. 4159628 + -7 -4.00532 AGTCACCTGCCTTGA TATCTCAAAACTCATC TTCG GGTGATGTTTGAGATA TTTGCTCTTTAAAAA 68 61 SFV_RS22265 NONE SFV_RS22270 4162882 .. 4162895 + -3.7 -4.84529 TCAAATTAAGCAGAA AGCCC AGTC GGGCC TTTTTGCGTTTCTAC 71 42 murB NONE SFV_RS22280 4165007 .. 4165021 + -5 -2.6472 GAGTATTCGCTCCCC TGCAAA TTA TTTGCG TAGTCTGACCTCTTC 48 48 SFV_RS22295 NONE SFV_RS22300 4166549 .. 4166569 + -2.5 -3.05816 ACTTACCGGCTCGAA TAAAGAGAG CTT CTCTCGATA TTCAGTGCAGAATGA 43 81 SFV_RS22305 4166691 .. 4166701 + -3.2 -2.56596 CCCGCTCCAAGATGT GCTG ATA TAGC TCAGTTGGTAGAGCG 42 32 SFV_RS22310 4166816 .. 4166832 + -6.5 -3.3071 ATTGCATTCAACAAG TCGGGCA TGT TGCCTGG TTGATGTGGTGATAT 59 75 tuf 4168089 .. 4168128 + -13.6 -3.72576 AACATTTGACGCAAT GCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGC TTTCGTACCAGAACC 100 49 secE NONE nusG 4169260 .. 4169298 + -13.3 -4.8543 GCGATTTAATCGTTG CACAAGGCGTGAGATTG GAATA CAATTTCGCGCCTTTTG TTTTTATGGGCCTTG 100 60 SFV_RS22330 NONE SFV_RS22335 4170529 .. 4170565 + -6.6 -2.87136 AAACTAATGCCTTTA CGTGGGCGGTGATTTTG TCTA CAATCTTACC-CCCACG TATAATGCTTAATGC 56 34 rplJ 4171423 .. 4171436 + -3.8 -4.07746 GCGATGCGAAAGAAG CTGC TTAATC GCAG TTATCTTTTTAACGC 59 18 rplL 4171902 .. 4171927 + -17.7 -4.64766 AGAAATCAGGCTGAT GGCTGGTGACT TTTT AGTCACCAGCC TTTTTGCGCTGTAAG 100 65 rpoB 4176230 .. 4176257 + -12.7 -2.65298 CGCTCAAACAGGTCA CTGCTGTCGGG GTAAAA CCCGGCAGCGG ATTGTGCTAACTCCG 81 45 SFV_RS22355 4180537 .. 4180550 + -9.5 -5.65177 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGTGT 100 52 nudC NONE hemE 4188799 .. 4188818 + -6.4 -4.91429 CAGTATCACCGCTAA GAGCCTGA TCCA TCAGGCTA TTTTATTTGCCATTT 81 26 SFV_RS22405 4189638 .. 4189654 + -4.4 -3.55444 CTAATTCAGGTAAAC TGCGGA TAATT TCCGTA TTTGAGAACTCAACA 54 37 SFV_RS22410 4190380 .. 4190392 + -4.1 -3.65351 GTGTATGCAGGAGAG TGCTA TTC TGGCA TTTCCGTCGCACTCG 53 146 SFV_RS22415 NONE SFV_RS22420 4191667 .. 4191678 + -5.8 -3.57263 TCACCAGTTGCTGTT GCAG TGCG CTGC TTTGAGCGTAAAAGT 60 266 SFV_RS22430 NONE SFV_RS22435 4194874 .. 4194887 + -5.9 -3.29829 GTCATTAAGGCGTAG GCGCG TTTC TGCGC TTCTGCCACGGTATG 56 110 SFV_RS22450 NONE SFV_RS22455 4200032 .. 4200067 + -7 -4.00532 AGTCACCTGCCTTGA TATCTCAAAACTCATC TTCG GGTGATGTTTGAGATA TTTGCTCTTTAAAAA 68 61 SFV_RS22460 NONE SFV_RS22465 4203321 .. 4203340 + -10 -4.7629 TCAAATTAAGCGAAA GGCTATCC GTCA GGATGGCC TTTTTGCGTTGGTGA 91 42 SFV_RS22475 4204994 .. 4205009 + -10.4 -5.63517 CAGCACCTTACCTCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA 100 71 SFV_RS22480 NONE SFV_RS22485 4208230 .. 4208243 + -8.1 -3.4252 CACGATGCCTGATGC GACGC TTGC GCGTC TTATCATGCCTACAA 67 106 aceK 4210314 .. 4210326 + -4.1 -4.04318 GATAAACCGTCTCTA CAACG TTT TGTTG TTTATGCTGTATCGC 60 269 metH 4217278 .. 4217304 + -13 -3.7456 CTTTTCCTTACAACA AACAGGGCGCTC AAT GAGTGCCCTGTC TCTTTATTAATATGA 100 56 SFV_RS22510 4219161 .. 4219183 + -7.7 -3.17075 GGCACTATGAACAAG ATGCCGGAT CATGC ATCCGGCAA TTCACTTAAAAACGG 64 88 SFV_RS22520 4220126 .. 4220151 + -3.2 -5.39755 GTACTTTGCCACCAA TTTGAGCGCC CCTTAA GGCGCTGATA TTTTTTATCCTTCTC 81 10 SFV_RS22560 4227573 .. 4227585 + -4.1 -3.44051 ACCCAGCGCACTATG CGGAT GCC ATTCG TTATAATGCTCGAAC 52 441 SFV_RS22585 NONE SFV_RS22590 4231676 .. 4231686 + -3.2 -3.90048 AACTATTATGTCACC CGCA TTA TGTG TATTTTTACCCACAA 55 228 SFV_RS22595 4233393 .. 4233424 + -8.7 -4.13767 TCTTATAAATGCACT TTGCGTGCCGC CCGTGACTAC GCGGCACGCCA TTTTCGAATAACAAA 78 33 SFV_RS22600 4235144 .. 4235163 + -5.6 -3.70689 GGCAGCATGCTGCCA GGTGATCC CCCT GGGCCACC TCTTTTGCGATTGTA 59 60 SFV_RS22605 4235949 .. 4235977 + -6.1 -4.45151 CATTACATTAAGACG TGGCCTGAT AAACATATCGC ATCAGGCCA TTTTCGTTAGCTATT 76 113 SFV_RS22625 4240176 .. 4240187 + -3 -4.58685 TAAAACTAAATATTT CAAA AATG TTTG TTTTTCACGCGCTTT 63 131 SFV_RS22630 4242654 .. 4242672 + -8.8 -5.85178 AATGTCATACTTTTT GCGCGG CCCCACC CCGCGC TTTTTTTTGCCTGTT 100 143 SFV_RS22635 4243741 .. 4243751 + -3.2 -4.07968 TGTCACGAAGCTCGC CTTC GCA GGAG TTTAATTATGTCTTC 57 144 SFV_RS22640 4245124 .. 4245147 + -12.6 -4.29472 CAGCAAACATAAAAG CCAACCTTAA GAAC TTAAGGTTGG TTTAATTTTGCTTTG 100 53 SFV_RS22645 NONE SFV_RS22650 NONE SFV_RS22655 4248744 .. 4248774 + -12.6 -2.66593 CCTTAAGAGTTCAAT TGGCCTGATAAGAC AGC GTCACATCAGGCCA TCCGTTTCAGCTTAT 81 160 SFV_RS22680 4254450 .. 4254489 + -17.2 -2.90797 TCCGGCAACGATGCC GACTGCCTGATGCGACGC TTGC GCGTCTTATCAGGCAGCC TCTCATCTGTATAAA 100 83 SFV_RS22685 4254997 .. 4255020 + -4.5 -2.80994 CCAACGCAATAACCC G-CCGGGAGG CCCGC CCTCCCGCAC TGTCATCGAATTCCC 47 29 SFV_RS22690 NONE SFV_RS22695 NONE SFV_RS22700 4257721 .. 4257740 + -5.7 -3.16191 CCATAATGCGTGCAC TGGCG-CG ACATC CGACGCCA TTCATGGCCATATCA 52 512 SFV_RS22710 NONE SFV_RS22715 NONE SFV_RS22720 NONE SFV_RS22725 4262637 .. 4262658 + -12.3 -3.64541 AAAATAAAATGTCTG CCGCGTGAT GGCT GTCACGCGG TATTTCGTTTCGTCA 95 34 SFV_RS22730 4263231 .. 4263254 + -6 -2.53581 AATAACGTTGACTGC TGCGCTCGTGT CTG ACACG-GCCCA TCGGTTGCAGGTCTG 53 11 SFV_RS22735 NONE SFV_RS22740 4264988 .. 4265007 + -13.6 -5.66684 ATACAGTCCTTTCTA CAGCCTCC TTTC GGAGGCTG TTTTTTTATCCATTC 100 40 SFV_RS22745 4265804 .. 4265826 + -15.6 -3.21153 TCAGGCATCCACACA TTGCCGGGGG ATA TCCCCGGCAA TCTTCAATTATTGAT 100 73 SFV_RS22795 4276254 .. 4276285 + -13 -2.60392 GGTAACGGTTTGTAG GCCTGATAAGACGC GACA GCGTCGCATCAGGC ATTGATTGCCGGATG 84 64 SFV_RS22800 NONE actP 4278385 .. 4278408 + -16.8 -2.79321 CATTAATCTCTCCCC TTCCCCGGTC GCCT GACCGGGGAA TACTCTTCCTCTCCA 100 35 SFV_RS22835 4284436 .. 4284465 + -12.9 -3.19389 CCGCCTGTAGTTTTA TTGCCCGCGCG TTAACTCC CGCGCGGGTAA TTGCTCCATCCATTG 91 31 SFV_RS22845 NONE SFV_RS22850 NONE SFV_RS22855 4287512 .. 4287534 + -13.5 -5.28176 GTTGGAGTCATTACC GAAGCCTCC ATAAC GGAGGCTTC TTTTTTATGGCTGGC 100 41 SFV_RS22865 4291224 .. 4291242 + -12.4 -4.55128 TGCTGTAATCGTTAA GGCCGCTT TCT GAGCGGCC TTTTCCTTTCAGAGT 100 33 SFV_RS22885 4293927 .. 4293950 + -14.6 -3.79668 CAGTTTAATTTCACT GCAGGCTGGG TAAC TCCAGCCTGC TTTCCTGCATTACAT 100 215 SFV_RS22905 4299028 .. 4299048 + -12.6 -5.00267 TCCATAAAAGAAATA GGGCTTCC ACCTG GGAAGCCC TTTCTTTTTATAGTT 100 34 SFV_RS22930 4303054 .. 4303073 + -4.3 -4.77567 CCTCATCGTTAGGTT GTGAATG AGAGTA CGTTCAC TTTTCTTCTGAACGT 73 300 SFV_RS22955 4308349 .. 4308366 + -11.3 -5.1101 GCAACCCAGAAGAAA GCCGGAT GATC ATCCGGC TTTTTTACATCATCA 100 150 SFV_RS22990 NONE malE 4315980 .. 4315991 + -7.2 -3.37796 TGAAATGCCGGATGC GGCG TGAA CGCC TTATCCGTCCTGGAA 63 46 malF NONE malG 4318541 .. 4318558 + -12.7 -5.99154 TTGTGACTATTATTC GGCGCTC CACG GAGCGCC TTTTTTTCTTTCGTC 100 96 xylE 4320329 .. 4320356 + -14.2 -3.98256 TGTAATCTTCCTGTC CAGCACGCCG CGCCATTT CGGCGTGCTG TCTTTTTACTCCCGC 100 36 SFV_RS23030 4321328 .. 4321355 + -8.5 -3.6215 GTCATTAAGAATGAG GGTGCCAGT GAGTGCGAAA ACTGGCACC TTTCCCATGACTTAG 72 33 SFV_RS23060 4329203 .. 4329232 + -7.2 -3.85542 TTTGAGTAAATACTG TATGGCCTGGAA GCTATA TTTCGGGCCGTA TTGATTTTCTTGTCA 68 32 SFV_RS23080 NONE SFV_RS23085 4333575 .. 4333593 + -3.2 -4.83169 CCTATATAACCCCTG CAATATAT TGA ATTTATTG TTTTTGTACCCCAGT 69 211 SFV_RS23095 NONE SFV_RS23100 NONE SFV_RS23105 4336732 .. 4336751 + -2.9 -2.57211 CCTGCGTGAAAGGAA CGTTTGA AACGGC TTAAACG GTTGTCAGCCGCCCT 40 9 SFV_RS23110 4338159 .. 4338180 + -2.2 -3.10775 CTTGCCCTGAACACC GGGCACCA CTGTAT TGATGCTC ATTTTCCATAGCCAT 42 460 SFV_RS24540 NONE SFV_RS23125 4339715 .. 4339739 + -8.6 -3.8512 TCTTAATTTAAGAAA GCGCAAGG AACGTTTAC CCTTGCGC TTATTATAATAAGTC 75 128 SFV_RS23135 4340999 .. 4341026 + -5.4 -4.11216 CCAGCCAGCCACGCC CAGCGCCAGGTG ACGC CAGCTGCCGCCG TTTTGCAGGTGCAGA 65 305 SFV_RS23155 4345294 .. 4345307 + -8.1 -3.50393 GTTTATGCCAGATGC GACGC TGAC GCGTC TTATCTGGCCTACAA 67 170 SFV_RS23190 4352371 .. 4352384 + -3.1 -3.49102 CGCACCGTCCAGCGT CAGAGC ATT GC-CTG TTCTGTCCAGGATCT 49 240 SFV_RS23215 4355757 .. 4355777 + -6.3 -5.24531 GCTTGCAAAGCTTTC TTTGTTTAG ATT CTAAATAAA TTTTTTATAAAACAT 87 198 SFV_RS23225 NONE SFV_RS23230 4358233 .. 4358252 + -12.1 -2.69246 AAAACTAACGCTTCA GGGCCCC GGTAAA GGGGCCC TGCTATCAATTTGTC 79 33 SFV_RS23235 4359453 .. 4359481 + -3.8 -4.32482 TATTGCTTACAGATT AGC-CGGATGCCT TAAT AGACATCCGCGCC TTTTCGATTATGGCT 64 208 SFV_RS23245 4361359 .. 4361370 + -5.8 -4.3898 CATCCTTGACCAGTA GCCA GATA TGGC TTTTGTCGCAGTCCT 72 158 SFV_RS23260 NONE SFV_RS23265 NONE SFV_RS23270 NONE SFV_RS23275 4363302 .. 4363320 + -8.9 -3.05844 ATTGATGAGCATAGT GAGGTGA GCATA TCACCTC TGTTCAGGTGGCCAA 68 330 SFV_RS23290 4366035 .. 4366058 + -10.2 -3.21872 CGACTTCTGATCCCT TTGCCGGGTG CTGT CGCCCGGCAC TTAAATCTCTTTGGA 74 31 SFV_RS23295 4367755 .. 4367770 + -10.4 -3.73336 GTCAACAATAATAAA GGGAGC TTTC GCTCCC TTGTTAGATTACGAT 80 120 SFV_RS23310 4371811 .. 4371842 + -2.4 -3.40597 CGCAATAGAAATTCA TTGCT-CATCTTTCA GGG TGAGGAATGCAGCAA TATTTAAATCCACCA 45 97 SFV_RS23315 NONE SFV_RS23320 4375194 .. 4375213 + -15 -5.47431 AGTGATGAAAACGAA GGCCGGAG CATG CTCCGGCC TTTTTTATCTCTTAC 100 48 SFV_RS23330 4377123 .. 4377148 + -9.7 -4.31379 CGAACTCTAAAAAAA TGCCCGCTAGT ATGT GCTATCGGGCA TTTTAATCAATTAAT 86 31 SFV_RS23340 NONE SFV_RS23345 NONE SFV_RS23350 4380010 .. 4380023 + -3.9 -3.87869 AAGATGAGAACTCAA TATGA GCCA TCATA TTTCTACCCGCTTCG 58 512 SFV_RS23370 4382379 .. 4382404 + -8.3 -4.93877 CTACGCTCAATTAAG CCCAGCCATTA TCCA TGATGTCTGGG TTTTGTTTACTAACG 91 45 SFV_RS23375 NONE SFV_RS23385 NONE SFV_RS23390 NONE SFV_RS23395 4384733 .. 4384758 + -10.5 -4.61231 CGGTTGGTAATAAAA GTCTGGCTC CCTATAAT GAGCCAGAC TTTTTACCGCTGTAA 91 44 SFV_RS23400 4385186 .. 4385205 + -10.7 -3.14468 TAATCTTGATGGAAA TCCGGGC TATCAT GCCCGGA TTAAGTCTGATGACA 78 38 treR 4389441 .. 4389454 + -8.1 -4.92239 ATCTTCGCTGCGTTT CGGGA ACGT TCCCG TTTTTAAATTTTTCC 87 65 SFV_RS23415 4390960 .. 4390973 + -3.8 -3.54424 TCTTCGGGGCGCAAT TGCG CCCCCT CGCA TTTGCAGGAATAACG 52 44 SFV_RS23420 4392659 .. 4392684 + -4 -4.60797 TAAATCTTCCCTAAG CCCCGATAATG CCGGT CATTC-CGGGG TTTTGTCTGTCAGCA 69 38 SFV_RS23425 4395254 .. 4395285 + -13 -2.60392 TGGCAACGGCTGTAG GCCTGATAAGACGC GACA GCGTCGCATCAGGC ATTGATTACCGGATG 84 101 SFV_RS23430 4395897 .. 4395910 + -2.3 -4.5852 TTCAGTTGCTCTGCA GCAGC CTGC GCTTC TTTTACTTTACCTTC 63 122 SFV_RS23445 4398437 .. 4398470 + -17.5 -2.69468 TGATGTGAGTATGGT TTGCCGGATGCGGCG TAAA CGCCTTATCCGGCAA TGCTATATCAGGCTG 100 51 SFV_RS23455 4401070 .. 4401095 + -16.3 -3.90762 TCCACACGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG 100 54 SFV_RS23485 4408315 .. 4408338 + -2.2 -4.95167 ATACATCGCATAAAA CAACGCCACC CGAA GGAGGCGTGC TTTTATTATTACTTA 69 372 SFV_RS23510 4415270 .. 4415294 + -5 -3.77209 CTAGCCACTGAAAAT GCCGGTTC ACTTTCTTC GAATCGGC TTTCAATGTGTATTT 59 251 SFV_RS23515 4416725 .. 4416749 + -14.3 -3.73647 ACCCCCAGAAACATC AACGGCTCCTG AAT CAGGAGCCGTC TTATTACTGCATAGC 100 40 SFV_RS23525 4417889 .. 4417919 + -7 -3.16743 TCTGGAAAAATAATT TTCCCCTATC GTTATCTATGG GATAGGGGAA TTAAGTCTCTGAGTT 59 57 cpdB 4422427 .. 4422448 + -4.3 -3.85362 CCCTCTTTCAGTTGT TGTGACAGG CTAA CCTGACTCA TTTCATACTTACCTT 58 509 SFV_RS23550 4423413 .. 4423456 + -2.4 -2.73334 GTTAATTAAAGTGGC ATCCTCCC-GCATCCTCTC TGATAAT GACGGGATGCCGGGAGCAA TCATGTCTGCTTCCT 40 40 SFV_RS23555 4424533 .. 4424551 + -6.8 -3.83318 AGCTTTTGCCTTAAA GGTGTATT TAA AATACATC TTATCTTATTAAGAA 66 86 SFV_RS23560 4425271 .. 4425286 + -3.2 -3.9243 TGGCATTGCGCCATC CAGCAT GATA ATGCGG TTATTTCCGCAGTTC 55 54 SFV_RS23575 4428495 .. 4428508 + -2.3 -3.1739 TATGATAAACTAGGC CAAGC GTAT GCTGG TTGATCAAATAATAT 43 128 SFV_RS23585 NONE SFV_RS23590 4431348 .. 4431367 + -5.7 -3.16191 CCATAATGCGTGCAC TGGCG-CG ACATC CGACGCCA TTCATGGCCATATCA 52 453 SFV_RS23600 NONE SFV_RS23605 4432859 .. 4432875 + -8.7 -2.61004 CAGCATGGTTGCCAG CGGAACG GTA CGTTTCG GGTTTTTAACCATAC 59 456 SFV_RS23615 NONE SFV_RS23620 NONE SFV_RS23625 4434724 .. 4434743 + -13.6 -3.31196 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTGATATGAATTTGG 100 105 fxsA 4441354 .. 4441386 + -4.8 -5.0925 GGATTAATGTCGAAA CGCCGGATTATG TGGTTATGC CATTTTCCGGCG TTTTTCGTTTTGGCA 79 34 groES NONE groEL 4444906 .. 4444929 + -12.4 -5.50723 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTGGTCA 100 55 SFV_RS23680 4445743 .. 4445756 + -8.1 -3.48884 TGAAATCAAGCATTC GGCGA GTGA TCGCC TCTATTTCTTTACCC 64 401 SFV_RS23690 NONE SFV_RS23695 4447620 .. 4447641 + -7.9 -4.30978 ATCAGTTACTGCTGG CGTAGCTGG AGAT CCAGCGGCG TTTTGCTGGGTTCGC 79 323 SFV_RS23705 4449251 .. 4449282 + -13 -3.65046 GCGTGAAGTAATGCG GTTGTGGTGCGGCC TGCA GGCTGCACCATCAC TTATTCAGGTCAGAG 100 30 SFV_RS23710 4449407 .. 4449419 + -3.3 -2.6432 TCGGTAACTCCATCT CTCGC GCT GCCAG CTAATTTTTCTTCTC 42 9 SFV_RS23715 4449688 .. 4449711 + -13.2 -5.13354 AGCAATAAGCAATAA CGGTACGACA GCAG TGTCGTGCCG TTTGTTTTTTCTGCG 100 33 SFV_RS23720 4450454 .. 4450464 + -3.2 -3.42197 TCTGCTGCCACATTC CTCT GTC AGGG TTATAGCCTTTATTA 49 306 SFV_RS23755 4456747 .. 4456773 + -7.3 -3.05596 GTATTGGTTTTTACG CTGC-CTGCTCA ATGT TGCGCAGTGCAG TTCAGTGGGCACGTG 60 171 SFV_RS23760 4458419 .. 4458454 + -10.6 -3.21912 TGAAGATGATGTTAA GCTGCTAAATGA-GCCA CGT TGACATCATTTGGCAGC TTCATGCATTACAAA 78 132 SFV_RS23780 NONE SFV_RS23785 NONE SFV_RS23790 NONE SFV_RS23795 NONE SFV_RS23800 4465484 .. 4465506 + -4.9 -4.78753 AATCAAGATTCCGTT TTGTCGAGT CGATC ACTTGACGA TTTTATTCGTCTTGA 75 215 SFV_RS23810 NONE SFV_RS23815 NONE SFV_RS23820 NONE SFV_RS23825 NONE miaA NONE hfq 4473289 .. 4473321 + -7.1 -2.54504 CGGGCTGTTTTTTTA CA-CGGGGAGC-CAG CGATC CTGCGTTCCCCGCTG ATCTATTTAGAGGGT 57 46 SFV_RS23840 NONE SFV_RS23845 NONE SFV_RS23850 4477006 .. 4477032 + -13.1 -5.38839 TACAGGTCAATAAAG CCACCG-CATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA 100 55 SFV_RS23855 NONE SFV_RS23860 4478712 .. 4478746 + -9.4 -3.10975 CAGTGTGATACATTG CTGTGTCGGTTAAGC CATTAC GCT-ATCCGACACAG TGTTAAATCCTCGCT 71 80 SFV_RS23865 NONE SFV_RS23870 4481774 .. 4481793 + -8.6 -3.20723 GCAGAGTGATCAATA CCCTCTTT AAAA GAAGAGGG TTAGATTGCTGACAA 67 32 SFV_RS23875 4482699 .. 4482716 + -9.9 -5.1101 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTGGGTAATGC 93 46 SFV_RS23880 NONE SFV_RS23885 NONE SFV_RS23890 NONE SFV_RS23895 NONE SFV_RS23900 4485582 .. 4485611 + -13.7 -3.14132 TCTGTCATGAATCCA TGGCAGTGACCAT ACTA ATGGTGACTGCCA TTGATGGAGGGAGAC 93 61 SFV_RS23905 4487616 .. 4487658 + -5.7 -4.98531 GGATAAGTCACTAAT TGCAGC-GAGGGTGAAGCAA GTAA TTGTTTCATCGTCAGCTCCA TTTTTCGTTTCCCCA 80 386 SFV_RS23920 4489541 .. 4489553 + -4.7 -3.57792 CGCCCGGATTAACCA GCTGC GAG GCCGC TTTAGCAATACGTAC 55 510 SFV_RS23935 4492725 .. 4492739 + -2.8 -4.48987 AATTGGCAGAACAGT CTGCTT AAT AAGGAG TTTTGATTATGACCG 63 18 SFV_RS23940 NONE SFV_RS23945 NONE ulaD NONE SFV_RS23955 NONE araD 4495948 .. 4495960 + -9.1 -3.46435 TACGTGGTAGTACGT TGCGC CTT GCGCA TCTGTTTCTTCATTT 71 232 SFV_RS23970 NONE rpsF NONE SFV_RS23980 NONE rpsR 4497423 .. 4497433 + -2.4 -2.50307 TCGCCATCAGTAATC GGTC ACG GTCC ATTAATACGACTTTG 39 28 rplI 4497932 .. 4497960 + -16.1 -3.33352 TATTCAACGAGACGT AAAAACGCCGACC ATT GGTCGGCGTTTTG CTTTCTATTTTTCGT 100 46 SFV_RS24000 4498918 .. 4498935 + -4 -2.90212 GTGACAACTCCTGTT GCTGGC CTGTTC GCCTGC TCTGTCGGGTGCTGG 46 56 SFV_RS24005 4499676 .. 4499695 + -4.2 -3.62046 TGTATTCCCGTATTA CTGAGATG GCTT CATCCCGG TTATTAAAACGATAG 53 179 SFV_RS24020 4501119 .. 4501149 + -6.2 -2.87463 ATAACGCGGCGAATA AT-ACCCGGTAGC ACTGGC GCTACCGGGTCAA TGTATCAGGCGACTT 55 37 SFV_RS24045 NONE SFV_RS24050 4509394 .. 4509404 + -2.4 -4.18018 GTTTATCCGCCGATT CCAG CAG CAGG TTTTCCATCACGCGG 58 303 SFV_RS24130 4524920 .. 4524930 + -6.8 -4.67353 TTTAGTATCTGATAA CCAG CGC CTGG TTTTTCCATGGATGG 79 44 SFV_RS24135 4527024 .. 4527034 + -5.4 -3.45768 AATCAGCAGAACCGC CATC ATG GATG TTGTCGCTTGTGGTA 56 365 SFV_RS24150 4530412 .. 4530438 + -5.8 -6.32017 ATTAAAGTTGCCATG CAGCGTCCGG GGAAGTG TTGGGCGCTG TTTTTTTTGTTTCTT 100 53 SFV_RS24185 NONE SFV_RS24190 NONE SFV_RS24195 4539127 .. 4539147 + -11.9 -2.80922 GCTGATTAACGTTTC CATTCGCTG CTG CGGCGAATG TGGTGTTGCGTTTTT 73 381 SFV_RS24205 4540346 .. 4540358 + -4.9 -3.14132 TTCGCATACCATCAA TTCTT AAA AAGAA TTGCTACCACGGAGG 52 397 SFV_RS24230 NONE rimI NONE SFV_RS24240 4543322 .. 4543336 + -9.2 -3.14132 TCGTTTTCAACAAGC GCGGCG CGA TGCCGC TTACTCAAGAAGAAA 70 81 prfC 4544957 .. 4544982 + -14.7 -2.68338 ATTAATTCTTGCCTC CAGGGCGCGGT AGCC GCTGCGCCCTG TCAATTTCCCTTCCT 89 36 SFV_RS24250 4546014 .. 4546028 + -4.2 -2.62396 TAAAAATATCGCATT GAGTGA TTT TCACGC TCATATCAAGCGGTG 44 95 SFV_RS24255 4546264 .. 4546282 + -14.6 -4.28049 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC 100 57 SFV_RS24260 NONE SFV_RS24265 4548314 .. 4548368 + -9.4 -2.5294 CGTAGGCCGGATAAG GCGTTCA-CGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTTGACGC GTCTTATCAGGCCTA 68 133 SFV_RS24280 4551013 .. 4551023 + -3.2 -3.3761 AGAATACTAACAAAC TCGC AAG GTGA ATTTTATTGGCGACA 48 89 SFV_RS24285 NONE SFV_RS24290 4553291 .. 4553301 + -4 -3.84451 CGAATAACGGTATAC TGAT CTG ATCA TTTAAATTTGAAGCA 55 34 SFV_RS24295 4554566 .. 4554585 + -10.7 -4.38927 GTTCTGATGGATTTG GGCGGAG CGTTGA CTCCGCC TTTGTTATGTCACAA 90 34 deoD 4555367 .. 4555390 + -12.4 -4.87037 CGATTGTCGTGTTAA GCCGGAGTGG GGGA CTGCTCCGGC TTTTTAGTATCTATT 100 59 serB NONE SFV_RS24330 NONE SFV_RS24335 NONE SFV_RS24340 4561592 .. 4561604 + -4.7 -5.36965 GCTCCAGCGCGTCTG CGCCC AGC GTGCG TTTTTTGTACTCTTC 90 182 SFV_RS24350 4565368 .. 4565384 + -4.5 -2.61144 ACTGATCCGCACGTT TATGATA TGC TATCGTA CTCTTTAGCGAGTAC 46 36 SFV_RS24355 4566212 .. 4566227 + -8.2 -3.76224 TTTGCTACCCGATTT CGTGCG CCAG CGCGCG TTTCCTCACTGCCAA 72 464 SFV_RS24365 4567345 .. 4567361 + -5.1 -3.78156 TCCTGGGCTAACGCG GTGGTAT AGA ATACCTC TTGTTCGTCGTCTTT 61 293 SFV_RS24375 NONE SFV_RS24380 4569313 .. 4569323 + -4.6 -3.43492 GCGGCATGGGATATA GCCT GAG GGGC TTGTAATGCGTATCG 54 9 SFV_RS24385 NONE SFV_RS24390 4572180 .. 4572197 + -12.7 -5.42259 GTTGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTTTGACGGTGG 100 42 SFV_RS24400 4573512 .. 4573548 + -2.3 -4.00042 ATTTGTAAATTCGCA CCGCGTAATAAGTTGA CAGTGA TCACCCTGTT-CGCGG TTATTTGGTCAAGAA 53 363 SFV_RS24405 NONE SFV_RS24395 4572174 .. 4572203 - -13.7 -4.64144 AATAAGGTTGAAAAA TAAAAACGGCGCT AAAA AGCGCCGTTTTTT TGACGGTGGTAAAGC 100 44 SFV_RS24370 4566989 .. 4567001 - -4.7 -3.80573 TGGATTATCAGGAAA GCCTG TGG CTGGC GTCTGGCTGGGTCGT 58 98 yjjX 4565403 .. 4565427 - -9.9 -2.65298 TTTAGCGAGTACAAC CGGGGGAGTCA TTT TGCTTCCCCCG CTAACAATGGCGACA 68 456 SFV_RS24345 4561337 .. 4561358 - -2.9 -5.03145 CAAGGTTTGAAAAAA CCTGCACGGG TGA CCCGC-CACG AAATTGAGGATGCTA 77 209 SFV_RS24320 NONE lplA NONE SFV_RS24305 4555254 .. 4555270 - -7.9 -2.67515 CTCACGAGCAGACCA CTGCCGC TGA GCGTCAG ACCACCTTCAACGAC 56 249 SFV_RS24275 NONE SFV_RS24270 4548348 .. 4548380 - -12 -2.57344 CAGTTGGCGCACAAT GCCTGATGCGACGC TTGAC GCGTCTTATCAGGC CTACAAGTCTGTGCC 79 65 rsmC 4540563 .. 4540574 - -7.2 -3.30124 TTGTAGGTCGGATAA GGCG TTCA CGCC GCATCCGACACGGTA 63 63 SFV_RS24220 NONE SFV_RS24215 NONE SFV_RS24210 4539683 .. 4539697 - -5.8 -3.53012 TCTCTGGCTTGCAAA TGATAA CAA TTATCA TATGATATTGGTTTT 57 341 SFV_RS24200 4538542 .. 4538560 - -5.9 -3.98282 GGTACATTAACCAAA GCCGGAC GTTAA GCCCGAC GGAGAGAGAAATATT 65 274 SFV_RS24180 NONE SFV_RS24175 4534943 .. 4534978 - -13.4 -3.26947 TAACTTTTATAGTAA CACACGGAGGAGAG GAGGCTGT CTCTCATCCGTGTG CTTAAGCGAGGCAAT 91 42 SFV_RS24170 NONE SFV_RS24165 4533593 .. 4533605 - -3.3 -2.78384 TTGTGTCGCAGTATA CCGCC AGA AACGG GGATTAATACTCTTT 43 29 SFV_RS24160 4533050 .. 4533063 - -5.2 -4.28254 GGGTAACAGCTAAAA CGCG GCGTTT CGCG GTTCAGGAAATGAAG 65 28 SFV_RS24155 4530478 .. 4530512 - -15.8 -3.33261 TTGTAAGCCGGAGAA GGCGTGTAGGTCGCAC CCT ATGCGACCTACACATC AGTCAGGAATTACCC 100 35 SFV_RS24145 4528236 .. 4528250 - -5.6 -3.14468 TGTGAGCATAGGTAA GCGGGA ATT TCCCGG TATTTATCTTTTGAT 54 84 SFV_RS24140 4526697 .. 4526724 - -12.2 -4.8543 TAATCGCCATAAAAA TGCCCGATAAGCA AAA TG-TTATCGGGCA TAGGGAGTTTAATCT 100 34 SFV_RS24125 NONE SFV_RS24120 NONE SFV_RS24115 NONE SFV_RS24110 4520194 .. 4520209 - -5.4 -3.70076 GCAAATTTATTTAAA CAACGC GTGT ACGTTG TTCTGTTTGAAATTC 59 1 SFV_RS24105 NONE SFV_RS24100 NONE SFV_RS24095 NONE SFV_RS24090 4516224 .. 4516236 - -7.7 -3.87815 TCTCAGGTTGATAAA TGGTC AGC GACCA CGGAATTGTGTTGGT 72 16 SFV_RS24085 4515228 .. 4515253 - -11.9 -2.62144 GGCAAATCATAATAT TCCCCGCTAAC AAGG GCTAACGGGGA CGGAATTTTTTATGG 79 61 SFV_RS24080 NONE hpaC 4512914 .. 4512942 - -9.6 -5.2291 AGATCACAATAAAAA TGCCCCTTCGACG AATG CGT-GAAGGGGCT GGAGCTTAAATCGCA 100 31 SFV_RS24070 NONE SFV_RS24065 4510378 .. 4510395 - -14.1 -4.51812 TCTGATAAGAACAAA GCCCCGC CGAA GCGGGGC TAAACACGGTTAGTG 100 35 SFV_RS24060 NONE SFV_RS24055 4509127 .. 4509160 - -9 -3.74077 TCTGACATATCTAAA GAGTTCCACTCGTAA TAATG TTGCG-GTGGAACTC TCAAAAAGTTGATCT 77 50 SFV_RS24040 4504868 .. 4504899 - -13.1 -4.47707 TTCCATGAAAAACAA GGCCTTCTGCAAC ATGATG GTTGCAGAAGGCG CAAAAGAGAGTTGTT 100 39 SFV_RS24035 NONE SFV_RS24030 4501673 .. 4501688 - -10.4 -4.1822 GGTGATGTGAATAAA GCGGCT ATTT AGCCGC TTTATTGGTTTTGTG 85 53 SFV_RS24025 4501122 .. 4501145 - -14.6 -3.38991 ACGCGGCGAATAATA CCCGGTAGCA CTGG CGCTACCGGG TCAATGTATCAGGCG 100 34 SFV_RS24015 NONE SFV_RS24010 4499384 .. 4499394 - -6.8 -3.96327 ATCCCGGATGACAAA GGAC ATT GTCC TGAACGCACTGCTGA 68 197 SFV_RS23995 4497937 .. 4497955 - -16 -4.72333 AACGAGACGTAAAAA CGCCGACC ATT GGTCGGCG TTTTGCTTTCTATTT 100 52 SFV_RS23965 4495812 .. 4495829 - -12.7 -5.40072 CGTTTTTCAAAAAAA GCCCCCT GCGA AGGGGGC AAAGCAAACTATGGC 100 66 SFV_RS23930 4489866 .. 4489907 - -13.1 -3.47762 AATAGCCAGGAAATA CTACGCCGGATAGCGCGAA CTTC TCCACGCTATCCGGTATAA ACGACAGATTACAGG 100 34 SFV_RS23925 4488554 .. 4488575 - -2.3 -3.55801 ATCAATTCTGGCAAA TCTTGC-TAC AAA GTATGCAGGA ATTCACTACTTTACG 47 503 SFV_RS23915 4487748 .. 4487759 - -2.2 -2.82327 TGTGCACAGGTAAAC GCAT AGGG ACGC AAAGCAATGTAAAGC 40 62 SFV_RS23910 4487326 .. 4487337 - -7.2 -3.30124 TTGTAGGCCGGACAA GGCG CTCG CGCC GAATCCGGCATTGTT 63 60 SFV_RS23805 4465245 .. 4465261 - -10.9 -2.62616 TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA 69 328 SFV_RS23775 NONE psd NONE SFV_RS23765 4458323 .. 4458362 - -14.5 -3.8647 ACTGATCATATGAAA TCCTG-CAACTCATCGTC TCTCC GGCGATGAGTTGTCAGGA AGTAATGCGTATGGA 100 126 SFV_RS23750 NONE SFV_RS23745 NONE SFV_RS23740 NONE SFV_RS23735 4451948 .. 4451968 - -19.7 -4.52589 GGTTTCCATACAAAA CGGCCCGCC ATA GGCGGGCCG GATTTACATTGGCGA 100 45 SFV_RS23730 4450764 .. 4450781 - -11.3 -4.46581 GAAAAGCGCAGAAAA GGTCCGA AAAT TCGGACC CGATGAAATTTTACT 100 36 SFV_RS23725 4449688 .. 4449711 - -11 -3.90559 AGCAATAAGCAATAA CGGTACGACA GCAG TGTCGTGCCG TTTGTTTTTTCTGCG 86 484 SFV_RS23700 NONE SFV_RS23685 4445464 .. 4445508 - -8.6 -3.31322 TTGAATGCTTGAGAA TTTGT-AGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATGACCAA CGATCACGTTATCAG 69 87 SFV_RS23665 4441030 .. 4441052 - -5.6 -3.62046 CCAGGGCTTTAAGAA TTTCGTGCTG ATG CAGCAAAAAA TGGCGGCGGGTGAAA 58 334 aspA 4439050 .. 4439069 - -13.6 -5.55769 GCTCACAAGAAAAAA GGCACGTC ATCT GACGTGCC TTTTTTATTTGTACT 100 52 SFV_RS23650 4437648 .. 4437667 - -16.4 -4.41348 TCGGCGGGAAAGAAA GCGGGGCG TGAA CGCCCCGC GATTGATCATTACAG 100 35 SFV_RS23645 NONE dipZ NONE SFV_RS23635 4434951 .. 4434962 - -3.6 -2.53876 TGTCAGGTCAATGCA CCAC CCTG GCGG CAGCGGGCGAAGCGC 42 1 SFV_RS23630 4434724 .. 4434743 - -13.6 -4.98531 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTGATATGAATTTGG 100 38 cadB 4432299 .. 4432318 - -6.4 -3.62046 CTATCGTTTTAATAA CTGGGATG AAGC CATCTCAG TAATACGGGAATACA 62 179 SFV_RS23595 4431182 .. 4431193 - -5.8 -4.13014 GTCATACGCGTAAAA CAGC CAGC GCTG ACGTGATTTAGCACC 65 109 SFV_RS23580 4428283 .. 4428313 - -7.4 -4.13014 GGCAGATGGTGAAAA TCCGCCAGAACGCC AGC GGCGTGGTGACGGG CTTAACCATTGATAC 74 88 SFV_RS23570 4426819 .. 4426829 - -4 -3.08798 ACGCGGGATGGAATA CTAA GAT TTAG ATCTAATGTTAATTT 47 204 SFV_RS23565 4425250 .. 4425274 - -16.5 -4.19817 GTGAGTGATCTAAAA GCTGGATGGCA TTG CGCCATCCAGC ATGATAATGCGGTTA 100 38 SFV_RS23545 4421972 .. 4422000 - -11 -3.6053 CGGCCTATAAATCAA CCGCATCCGGCA TTTAT TGGCGGATGCGA TGCTGCCGTATCTTA 83 94 SFV_RS23535 4419025 .. 4419067 - -10.1 -3.86346 TTAGGTTGGGATAAA TCAGGATGGCAGAATCAG GAAATACA CTGTTTCTGCCATC-TGA ATTTAGTAAATGGAC 82 28 SFV_RS23530 4417889 .. 4417919 - -7 -2.53831 TCTGGAAAAATAATT TTCCCCTATC GTTATCTATGG GATAGGGGAA TTAAGTCTCTGAGTT 54 26 SFV_RS23520 4416727 .. 4416747 - -16.9 -3.50335 CCCCAGAAACATCAA CGGCTCCTG AAT CAGGAGCCG TCTTATTACTGCATA 100 50 SFV_RS23505 NONE SFV_RS23500 4412474 .. 4412485 - -4.4 -2.69546 CCATAAACTCATAAT TCTG GCCC CAGA CCGATGTAAAACTGT 47 7 SFV_RS23495 NONE SFV_RS23490 4408318 .. 4408335 - -8.3 -4.32067 CATCGCATAAAACAA CGCCACC CGAA GGAGGCG TGCTTTTATTATTAC 84 37 SFV_RS23480 4406075 .. 4406089 - -7.1 -3.42996 CAGTAGGCATGATAA GACGC GGTAA GCGTC GCATCAGGCTTCAGT 65 108 SFV_RS23475 NONE SFV_RS23470 NONE SFV_RS23465 4402415 .. 4402440 - -9.8 -5.61596 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC 100 220 SFV_RS23460 4401070 .. 4401095 - -16.3 -2.52015 TCCACACGGAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG 100 9 SFV_RS23450 4398219 .. 4398244 - -3.9 -4.26189 CCATAAACTGGAAAA CCTGCGCGATC GTCT GATCGATCAAG GTGATGACGCCATCG 62 275 pmbA NONE SFV_RS23435 4395804 .. 4395837 - -14.7 -3.4072 CATTTGCGATGATAA GTTCCCTGTTACCTG AGTG CAGGCAACAGGGAAA TGAGGAATTAACGAT 100 33 SFV_RS23405 4385186 .. 4385205 - -10.7 -3.65827 TAATCTTGATGGAAA TCCGGGC TATCAT GCCCGGA TTAAGTCTGATGACA 83 199 SFV_RS23380 4382434 .. 4382444 - -2.4 -4.07568 GTCGTCCCCCTAAAA GCGG CTC CCGA TAAATATAAATCTTC 55 436 SFV_RS23365 NONE SFV_RS23360 4380347 .. 4380378 - -7.4 -3.85698 CGCTCTTTTCACAAA CTCGCCGTAAAC CTGGAGTT ATTTACGGCGAA AAGTCATCACGCCAT 68 32 SFV_RS23355 NONE SFV_RS23335 4377123 .. 4377148 - -9 -5.47399 CGAACTCTAAAAAAA TGCCCGCTAG TATGTG CTATCGGGCA TTTTAATCAATTAAT 100 40 SFV_RS23325 4375194 .. 4375213 - -15 -3.72073 AGTGATGAAAACGAA GGCCGGAG CATG CTCCGGCC TTTTTTATCTCTTAC 100 37 SFV_RS23305 NONE SFV_RS23300 4367755 .. 4367770 - -10.4 -4.57882 GTCAACAATAATAAA GGGAGC TTTC GCTCCC TTGTTAGATTACGAT 89 34 SFV_RS23285 4364700 .. 4364715 - -9 -5.64274 TTAGGCACAAAAAAA GACGTC CGTT GACGTC TATTGATGTTCCGAT 100 40 SFV_RS23280 NONE SFV_RS23255 NONE SFV_RS23250 4361043 .. 4361055 - -4.8 -3.25088 GCGTAAAGCGATGAA CCGT GGACT ACGG AAAATTTTGCTCGCC 49 198 SFV_RS23240 4359416 .. 4359426 - -4.6 -4.63542 CACAAGGGTGAAAAA CGCG CAC CGCA TAAACCGTTGTTATT 71 338 SFV_RS23220 4355616 .. 4355643 - -6.2 -3.83155 CACCAACATCAACAA GCCTCTCCAGAT CGAC ATCAGGAGTGAC CAGTTACAAGCCACA 64 248 SFV_RS23210 4353935 .. 4353964 - -8 -5.10064 CCCAATAGATAAAAA GATAACCACACA CGAAGT TATGTGGCTATC AGTCAATTACATTAA 87 505 SFV_RS23205 4352805 .. 4352819 - -2.8 -2.75536 AAACTATTTCTAAAT CGAC ATGGGCA GTCG TTCTGTACACTTTGT 41 459 fimA 4352179 .. 4352195 - -3.5 -3.31792 TCATTACCCGCACAA GGGTGGG CAT CCCTGCC CGTAATGACGTCCTT 48 54 SFV_RS23185 NONE SFV_RS23180 NONE SFV_RS23175 NONE SFV_RS23170 NONE SFV_RS23165 NONE SFV_RS23160 4345157 .. 4345183 - -14.4 -3.69506 TAGCGTAAAAGAACA CCAGAGCCTGCC AAT GGCAGGCTCAGA CTGATGACTAAAGTC 100 242 SFV_RS23150 NONE SFV_RS23145 4342251 .. 4342275 - -15 -3.58329 GCAAGGAAGAAGGAA CCGGCACGGC GCGCA GCCATGCCGG TGGGTATTAACGGCT 100 32 SFV_RS23140 4340685 .. 4340716 - -12.5 -4.94243 GCAAAAAAACGAAAA CTGGTCAACCAAA TATCAG TTTGATTGACCAG TAAGTCTGTAGGGTA 100 50 SFV_RS23130 4339715 .. 4339739 - -9.3 -4.2528 TCTTAATTTAAGAAA GCGCAAGGA ACGTTTA CCCTTGCGC TTATTATAATAAGTC 82 39 SFV_RS23120 NONE iraD 4337617 .. 4337628 - -3.6 -3.16742 CTGAATCGGGACGAA CAGG TGAT CCCG ATTCAGGCCTACGCA 47 114 SFV_RS23090 4333485 .. 4333508 - -11.1 -3.73224 GCAGTTGTTATTAAA GGATACCCT TTTACG AGGGTATCC CTTCAGACTGATAAC 85 105 SFV_RS23075 NONE SFV_RS23070 NONE SFV_RS23065 4328874 .. 4328894 - -6.2 -2.77182 CGGTAGACTTAATCA CCACG-TCA GAAG TGAGCGTGG CATTAACCCTTGATA 51 493 pgi 4325524 .. 4325548 - -14.4 -4.40358 ATTTATCTGATAAAA CAATGCCGAC TTATT GTCGGCATTG TTTTTAAGGTTATTT 100 150 SFV_RS23050 4324879 .. 4324900 - -11.7 -3.32343 TCCAGAGGGGCAGAA TAACCACAC CGGA GTGTGGTTA TGGTAAATCCCTTCA 85 94 SFV_RS23045 NONE SFV_RS23040 NONE SFV_RS23035 4321327 .. 4321356 - -5 -2.96249 GGTCATTAAGAATGA GGGTGCCAGT GAGTGCGAAA ACTGGCACCT TTCCCATGACTTAGC 50 36 SFV_RS23025 4320811 .. 4320822 - -4.4 -3.28924 GAGCTTCCTGTATAA CACA AAAA TGTG ACGGAGATCTATATT 52 101 SFV_RS23015 4320305 .. 4320315 - -2.4 -4.58419 AGAAAACACAACAAA CTGC TAC GCTG TAATCTTCCTGTCCA 61 72 SFV_RS22985 4313256 .. 4313266 - -6.8 -2.62184 TCTTTTTTCACATCA CCTG TGA CAGG CTTTGTGTGTTTTGT 55 48 lamB 4311793 .. 4311806 - -9.5 -2.97017 AACCCGATAATCAGA GGGGC TTTC GCCCC TTTCAGATAATGACA 70 96 SFV_RS22975 4310753 .. 4310772 - -11.4 -5.71983 GGAAGCATAAAAAAA GGTGCGCC AGGA GACGCACC AGTTGTTGCAAAATC 100 58 SFV_RS22970 4309860 .. 4309870 - -3.2 -3.63768 ATGCGCAACAAAAAC GCAA CAA TCGC ATGAAGTGGTAAAAC 51 74 ubiC NONE ubiA 4308349 .. 4308366 - -11.3 -4.35604 GCAACCCAGAAGAAA GCCGGAT GATC ATCCGGC TTTTTTACATCATCA 93 38 SFV_RS22950 4305174 .. 4305184 - -5.4 -2.87132 CCCTGGGTGTATATA CAGT TAT ACTG TGAGTATATACAGCA 51 103 SFV_RS22945 4304507 .. 4304530 - -16 -4.94262 GAGATGAAAAACAAA CCGCGACGCC AGGC GGCATCGCGG TCTCAGAGATATGTT 100 39 SFV_RS22940 4303067 .. 4303087 - -2.6 -2.69964 TTGTGAATGAGAGTA CGTTCA CTTTTCTTC TGAACG TGAGATTAAGTGTAG 41 84 SFV_RS22935 4302497 .. 4302509 - -9.1 -3.28791 AGGTTTTGTGCATAA GGTGG AAT CCACC AACAGTTATGTGCTC 69 337 SFV_RS22925 NONE SFV_RS22920 4300898 .. 4300919 - -9.5 -5.4251 TTGATAGAGAAAAAA GAACCCAAT AAAT ATTGGGTCC TTTTATATAATGCCT 100 67 SFV_RS22915 4299507 .. 4299530 - -13.1 -4.43681 GATTTAACAGCAAAA CGCCCCGCG ACGGTG CGCAGGGCG TGGTGAATTTGACTA 100 56 pspG 4299028 .. 4299048 - -12.6 -3.99938 TCCATAAAAGAAATA GGGCTTCC ACCTG GGAAGCCC TTTCTTTTTATAGTT 100 162 SFV_RS22900 NONE alr 4295274 .. 4295294 - -3.9 -4.09215 GAGACTAATGATAAA CGTACATCC GCC AGAGGCACG ACCTTTATAAGAGCA 59 137 SFV_RS22890 4293789 .. 4293801 - -3.4 -3.13308 CACACGAAAAAATAG GGAA AGGAA TTCC AGATAATTGGGATAA 46 184 aphA 4292108 .. 4292134 - -3.6 -3.1595 ATTAAAAAAACAGCA TTCGGGAGAG CATCACT CTCTCCCGCT CTGTCAGTATTCTGA 46 29 SFV_RS22875 NONE SFV_RS22870 4291161 .. 4291190 - -2.1 -3.89346 CCGGTACGCCAGAAA CCGT-CGCGGAG TGCGAAG CTTCGCATACGG CACGCTTCCTCAAGC 54 86 SFV_RS22860 4287515 .. 4287531 - -10.1 -3.10164 GGAGTCATTACCGAA GCCTCCA TAA CGGAGGC TTCTTTTTTATGGCT 73 98 SFV_RS22840 4284252 .. 4284276 - -6.5 -2.80816 CGGTGACGCATCAGA CGCTTGGCGA TTACAT TCGCCAA-CG CCGCCTGTTACTGGC 51 182 SFV_RS22830 4283377 .. 4283401 - -14.4 -4.67651 AGACCGGAAAACAAA CTAAAGCGCC CTTGT GGCGCTTTAG TTTTGTGTTTGCGGA 100 181 SFV_RS22825 4281455 .. 4281486 - -12.4 -4.37658 AATGTGCGGAGAAAA TAAAAACGGGCAGC CATT GCCACCCGTTTTCA GAATCCGATGAAAGA 100 41 SFV_RS22820 4279644 .. 4279661 - -9.9 -3.5774 AGCTAACCTGTTAAA GGTGCAA AAGA TTGCACC TTTTTCAGATTACCT 77 66 SFV_RS22815 4278969 .. 4278980 - -5.8 -4.13014 GTCATACGCGTAAAA CAGC CAGC GCTG ACGTGATTTAGCACC 65 109 SFV_RS22810 4278462 .. 4278477 - -6.2 -4.80736 TATTAAACAAATAAA CTCATT AAAA AATGAG CGATTTTTGACAGTC 80 190 SFV_RS22790 NONE nrfA NONE SFV_RS22780 NONE SFV_RS22775 NONE SFV_RS22770 4270096 .. 4270125 - -2.8 -3.54424 CCGCACTCCCGCAAA GGCCGTCAACGGG GTCAA CACGTTGACC-CC GAGACTTAACAACAA 48 96 SFV_RS22765 NONE SFV_RS22760 NONE SFV_RS22755 4267363 .. 4267375 - -3.4 -3.84246 AGGATTAATGAATAA CCAT TTGTT ATGG AAAGATTTTTATTTG 53 139 SFV_RS22750 4265804 .. 4265826 - -14.9 -2.91912 TCAGGCATCCACACA TTGCCGGGG GATAT CCCCGGCAA TCTTCAATTATTGAT 89 33 SFV_RS22705 4256972 .. 4256985 - -8.1 -3.30124 TCGTAGGTCGGATAA GACGC CCCG GCGTC GCATCCGACAATGTG 65 271 SFV_RS22675 NONE SFV_RS22670 4250391 .. 4250449 - -3.2 -3.62522 CAATCTCTGTAACAA GCGT-AGCGGGTTTGCTTACACCCTCC GGTTAA GGAATGTACAATCAAACCAGTTGACGC CTGAATTGGGCAGTT 51 128 SFV_RS22665 4248720 .. 4248734 - -2.9 -2.87344 TATGCGCGTCAGAGA TTAAG TGAAC CTTAA GAGTTCAATTGGCCT 42 77 SFV_RS22660 4248537 .. 4248554 - -6.3 -4.07568 GTTTTTCCTGCAAAA CCGGCAAG AGA CTT-CCGG CACGCGGGCCTGGGT 68 56 SFV_RS22620 4238968 .. 4238980 - -3.3 -3.88291 GAGCATTCCCATAAA CTCAG ATC CTGCG TGAAGCAGCAGTAAA 55 14 SFV_RS22615 NONE SFV_RS22610 4235948 .. 4235978 - -3.3 -2.52519 GCATTACATTAAGAC GTGGCCTGATA AACATATCG CATCAGGCCAT TTTCGTTAGCTATTG 42 47 SFV_RS22575 NONE SFV_RS22570 4227563 .. 4227575 - -3.3 -2.6063 GCGAGCGATAACCCA GCGCA CTA TGCGG ATGCCATTCGTTATA 42 254 SFV_RS22565 4227092 .. 4227112 - -4.5 -4.61527 AAAACGGCGGAAAAA GGCGGTCGC CCG GCGTCCAAC GGTAAGCGTTTTACC 72 203 SFV_RS22555 NONE SFV_RS22550 NONE SFV_RS22545 NONE SFV_RS22540 NONE SFV_RS22535 NONE SFV_RS22530 4221541 .. 4221559 - -2.3 -3.61398 TGCCGGGGCGAAGAA TCAGGAC AGGAA GCCCAGA GCATTGCCGATAATC 49 7 SFV_RS22525 4220126 .. 4220151 - -3.9 -3.14564 GTACTTTGCCACCAA TTTGAGCGCCC CTTA AGGCGCTGATA TTTTTTATCCTTCTC 48 134 SFV_RS22515 4219162 .. 4219182 - -11.2 -3.45742 GCACTATGAACAAGA TGCCGGAT CATGC ATCCGGCA ATTCACTTAAAAACG 85 32 SFV_RS22500 4212284 .. 4212294 - -2.6 -2.80079 AACAGTGAAAAAATT TAAT ATG ATTA CAACTAAAAAAATAT 41 271 SFV_RS22495 4209534 .. 4209549 - -4.7 -5.07053 AAGCAGCGGAAAAAA TCACC GATCTT GGTGA GCAGATTGTAATTCG 81 515 SFV_RS22470 4203153 .. 4203174 - -8.7 -3.91196 CTGATACAGATTAAA TCAGAACGC AGAA GCGGTCTGA TAAAACAGAATTAGC 76 270 purH NONE SFV_RS22440 4194713 .. 4194740 - -10.4 -4.36914 CGGCGCTGGAGAAAA CGGGCGGCAACA AAAC CGAAGCCGCCCG TCAGTTAGGGATCAC 90 71 zraP 4190963 .. 4191004 - -4.5 -2.62616 GCAGTGGCGATACCA CGA-CGCGAGAGTATCGC TGGCAGG GCGATAACCTCACGCTCA TCAATATCAATGTTT 45 449 SFV_RS22390 4186173 .. 4186194 - -6.6 -3.19824 GGATGAAGCAAGAGA CG-ATCGCC GCAAA GGCGATGCG ATAGCAGATTAACTC 59 181 SFV_RS22385 NONE SFV_RS22380 NONE SFV_RS22375 NONE SFV_RS22370 NONE SFV_RS22365 NONE thiH 4180537 .. 4180550 - -9.5 -4.8384 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGTGT 91 227 SFV_RS22290 NONE SFV_RS22285 4164989 .. 4165006 - -8.4 -4.80417 CAGAAAAATAAGAAA GGGGAG TATTCG CTCCCC TGCAAATTATTTGCG 89 32 SFV_RS22240 4152933 .. 4152947 - -4.2 -4.79752 GTGAACAAGAGAAAA CCGCAA TTA TTCCGG GAAATGTGAAGGACG 71 444 SFV_RS22225 4150211 .. 4150224 - -4.5 -3.1552 GGCTATCTATGAAGA TCACC CGTG GGCGA ACCGCGAATGCGTAC 49 397 SFV_RS22175 4139523 .. 4139533 - -6.8 -3.5947 AATCGCCATACATAA CACC AAA GGTG TAGGTCGGATAAGAT 64 128 SFV_RS22170 4136594 .. 4136615 - -13.7 -4.41206 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGAAGAGGAA 100 43 SFV_RS22165 4134622 .. 4134642 - -7.6 -5.1861 GGCATTATTAAAAAA GGCCAC-CT GAAA AGTGTGGCC TGAGGGGAGTTCGAT 91 100 SFV_RS22160 4133675 .. 4133685 - -8.2 -2.71731 CGCAGCGGGTAATGA GCGC GGT GCGC AAAGTGCTTTCTGCG 60 57 SFV_RS22130 NONE SFV_RS22125 4125570 .. 4125591 - -2.2 -3.07013 TACGCGGTTAACATA CGGAGCAA CGTATT TTGCCCCT GCCAGTGCGGCTAAT 42 88 SFV_RS22120 NONE gldA 4124155 .. 4124173 - -11.7 -3.53343 AATTTTGCGTTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT 88 37 SFV_RS22110 4124030 .. 4124046 - -7.9 -2.62983 GGGAGTTTCAGATTA CTGGCAC AGA GTGCCGG ATGCGGAGTGAACGC 59 1 SFV_RS22105 4122818 .. 4122832 - -4.2 -4.25104 TCTCTTCGATGAAAA GTGCCA TGC TGGCAA TCCTCTCCGGTGTTA 62 486 SFV_RS22085 4118411 .. 4118425 - -3.4 -2.78679 CTTTGCCATCGAAAG CCGCTG GTA CCGCGA TAATCCGCTGGTGAT 41 258 SFV_RS22070 4114285 .. 4114313 - -2.4 -3.30243 ACGTAGGCCTGATAA GCGTAGTG-CATC AGGC GATTCCACTCCGC GCCGCTCTTTTCCGC 45 42 SFV_RS22065 4113497 .. 4113510 - -9.5 -5.02074 GGATTTCCGAAAAAA GCGCC GCAC GGCGC TTTTTTTGTGCCTGA 93 53 SFV_RS22055 NONE SFV_RS22050 4109591 .. 4109604 - -5.2 -2.82987 GCAATAGCGACCATA GCGG GAGAAA CCGC AGGCAGATTTCGTTG 49 207 SFV_RS22045 4108678 .. 4108697 - -13.6 -4.05991 AATACAGAGTACAAA CCCCGTAC AAAA GTACGGGG CATAATGCAATTATA 100 63 SFV_RS22040 NONE hslU 4106723 .. 4106740 - -9.1 -5.06816 ACGCGCCAATAAAAA TGGGGCC TTTC AGCCCCA TCAAACAATGATGAA 93 56 SFV_RS22030 4105753 .. 4105767 - -5.8 -3.08032 CTGTTGGCAAAATCA TCAATT GTT AATTGA TATTTGTCAGTTATG 52 36 SFV_RS22025 4105177 .. 4105192 - -10.4 -5.31456 GTAACGCAGAAAAAA GGCACC TTGC GGTGCC TTTCTTATCATTCAA 100 33 SFV_RS22015 NONE glpK 4102011 .. 4102024 - -8.1 -3.30124 TCGTAGGCCTGATAA GACGC GTAA GCGTC GCATCAGGCGATCAG 65 70 SFV_RS22005 4100787 .. 4100808 - -13.1 -5.7946 CTCCGAACAAAAAAA TTCCAGTCC CGAA GGACTGGAA GGCTCAATCGATCAA 100 46 SFV_RS22000 4099723 .. 4099745 - -10.8 -3.41024 CCCTGCAACAGAAGA TATTCTTCAA TTG TTGAAGAATA AGTCGGATAACAAGC 76 266 SFV_RS24535 NONE SFV_RS21985 NONE SFV_RS21980 4096730 .. 4096755 - -14.1 -5.08601 TTATCGTAATAAAAA TCGCCCAAACA TTCC TGTTCGGGCGA TCAAATTAATTATTG 100 35 SFV_RS21975 4095096 .. 4095134 - -16.1 -3.56142 GCGATTAATAAGCAA CCGAATGCCCAGCTGTT TTTTT AAAGGCTGGGCATTCGG TTTTTACAACGTTAT 100 45 SFV_RS21970 4093677 .. 4093692 - -3.2 -4.62069 TTCTTAGCGCAAAAA CTGCCA GATT TGGTAG GACCAAAATTTATCC 66 293 SFV_RS21965 4092513 .. 4092546 - -12.6 -2.92667 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAAG GTTCAGCCTTACTC TTTCCTGCTAACCAT 82 343 SFV_RS21950 NONE SFV_RS21945 4088110 .. 4088127 - -12.7 -4.72272 CGCCGTTATTAAAAA GCCTGCC ATCT GGCAGGC TTTTTTGGTAATGAC 100 47 SFV_RS21925 4083506 .. 4083531 - -6.1 -3.11619 GAATAATTCACGTAA GCCCGGTCA GTCCAATG TGAACGGGC TTTTACTTAACTCAC 56 32 xylF 4078302 .. 4078330 - -12.4 -4.0641 CGGCATGGAGAGAAA TCACGCCCCCGC TCCGC GCCGGGGCGTAA CGCTTACAGCTCGCT 100 29 SFV_RS21895 NONE SFV_RS21890 4075508 .. 4075539 - -12.4 -4.7078 TGAATCATGCAAAAA CTCAAAACCGGTAA TACG TAACCGGCTTTGAG AAAATTTTTATCAAA 100 42 SFV_RS21885 4074073 .. 4074083 - -3.2 -3.22491 AAAGCGGATCAGGAA GTGA CTG CCAC AGCGATGATTCACAA 45 242 malS 4070927 .. 4070948 - -2.9 -3.36273 TCTGTTGAAGAGTAA GCGGTGC TTTATCCC GCAACGC TGATTAGGGCTGACA 46 95 avtA NONE SFV_RS21865 4069439 .. 4069469 - -9.1 -3.53444 GCAGCCTGTTTGAAA CGTTTTCCGGCGTT TCTC AACGCCGGAATA-G TGCGCTTTGTTTATG 73 11 SFV_RS21850 NONE SFV_RS21845 NONE SFV_RS21840 NONE SFV_RS21835 NONE SFV_RS21830 NONE SFV_RS21825 4064304 .. 4064318 - -2.8 -3.33696 TTTCCTTTTAATTAA TCCATT TCA AAGGGA GGATGATGAGAACGG 46 3 SFV_RS21820 NONE SFV_RS21815 NONE sgbH NONE SFV_RS21805 NONE araD 4059247 .. 4059266 - -3.5 -3.53091 ACCCTTGCCTGGAAA GCGCAGA AACTGA TCCGCAC GCAATATCATCGCCC 51 355 SFV_RS21790 NONE SFV_RS21785 4054924 .. 4054956 - -7.6 -2.87564 CGAGCGCCGGATATA GCGAGCTGCCGGAA GAGAT TACCGACAGCCCGA TGATTGATCGTAATG 58 202 SFV_RS21775 NONE SFV_RS21765 NONE SFV_RS21750 4050515 .. 4050554 - -2.8 -4.55295 TCCGGCATAAACAAA GCGCACGTTGTTACAA TTTACGTT TTAAACCTACGTGCGC AATAACCCAGACTAC 63 82 SFV_RS21710 4039409 .. 4039428 - -13.6 -3.64703 TTTCCCTCACCCAAA CCCTCTCC GTGA GGAGAGGG TAGGATTGGATTACT 100 36 SFV_RS21705 NONE SFV_RS21700 NONE SFV_RS21690 4036668 .. 4036678 - -4.6 -2.94747 TTAGGCGAGTAGACA GGAG AGT CCCC GCATTGACCAGCTAA 48 89 SFV_RS21685 NONE SFV_RS21680 4035661 .. 4035684 - -2.4 -3.21241 ATATGAAAGAAACCA TGTCTGGGAA AAAT TTCACAGATA ATTGATTTTGTGAAT 44 153 SFV_RS21675 NONE SFV_RS21670 4030273 .. 4030298 - -14.1 -4.86731 GTCTGGTAAAGAAAA GGGCAATCCTC ATCA GAGAATTGCCC TTAGATTGTTGACCC 100 122 SFV_RS21665 NONE SFV_RS21660 NONE lldD 4026215 .. 4026237 - -12 -2.79302 ACGATGTTTAGCATA CTGCCCCC TTAGTGC GGGGGCAG GATAGCAGAAAATTG 79 197 SFV_RS21650 4025314 .. 4025350 - -3.6 -4.7254 ACCCGGCAGCAAAAA TTGGCCGTGGCATTAT GCTCG ACCACGCCACGGGCAT CGTTGTGGGTGAAAC 70 415 SFV_RS21620 4021853 .. 4021864 - -5.8 -4.13014 GTCATACGCGTAAAA CAGC CAGC GCTG ACGTGATTTAGCACC 65 109 SFV_RS21615 4021482 .. 4021498 - -4.3 -2.86656 GATCAAAATATACGA CCGCTCG CGG CAAGCCG ATGCCAGATTTGGGT 48 53 SFV_RS21610 NONE SFV_RS21605 NONE SFV_RS21600 4017413 .. 4017432 - -4.2 -3.34398 CCCGGTGCGCAAAGA GCCGGATA TTCT TACCCGCC AACGGATGATTGCCG 49 185 rfaD NONE SFV_RS21560 NONE SFV_RS21555 NONE SFV_RS21550 4007671 .. 4007687 - -10.1 -5.47159 TTGAATAAATAAAAA GGCCGCA TTA TGCAGCC TTTTTTATTTTTTAC 100 37 SFV_RS21500 NONE coaD 3997688 .. 3997700 - -3.3 -3.44848 TGTGGCGACTAAACA TGCGC AGC GGGCA ACGTTTTATTGTCGG 49 94 SFV_RS21470 NONE SFV_RS21465 NONE slmA 3992954 .. 3992977 - -16.8 -2.54371 GCGTTTAAAGAAACT CGCCGGATGA AAAG TCATCCGGCG TCATATTACTGCAAC 100 31 SFV_RS21445 3990473 .. 3990489 - -3.6 -2.77538 CGGGGAAGAAAAATG CCGCTC TGTTT GAGTGG GCGACATTTGTGAAG 43 69 dinD 3989283 .. 3989295 - -4.9 -2.69601 GTGAGAGGAAATTGA TAACT TTT AGTTA TGTGAAATCGCTATT 49 217 SFV_RS21435 3988534 .. 3988559 - -11.9 -3.89354 TGCGCAAATCAAGAA GCTGGGCAG TTGGCTGG CTGCCCAGC AGATCACAGGTTTTG 93 45 gmk 3985975 .. 3985988 - -3.1 -3.41913 GCCATACTTAAAAAG CTCCA CAGG TGAAG AAATGACTGGGCATG 48 56 rpoZ 3985672 .. 3985682 - -2.4 -2.83082 TCAAACAGATACAAG GGCG ACC CGCT TTGTGATTAACGACG 40 32 SFV_RS21415 NONE SFV_RS21410 NONE SFV_RS21405 3980754 .. 3980775 - -13 -3.21912 CGGTTAACCGATGAA GCGGCGGT CTTCTC ACCGCCGC CTTTTACGCATTCGA 91 29 SFV_RS21395 3977769 .. 3977789 - -2.6 -2.72511 TCCATCCCGTGAAAT GCACATAA GGGAG TTATGCAC GATTTACGCGCAATC 41 105 SFV_RS21390 3976000 .. 3976028 - -14.5 -3.08312 AATCTATTGACGGAA TGCCGGGTACGTC TGA GTCGTACCCGGCG AGATTGATGTTTACC 89 36 SFV_RS21375 NONE SFV_RS21370 3970334 .. 3970358 - -12.9 -5.35721 ATATAATAACAAAAA TCCTCCAGCCT TGT AGGCCAGAGGA TAAAATACTTAATTG 100 71 SFV_RS21365 3968862 .. 3968882 - -9.7 -4.31397 ACTTTCAGAAAATAA CCCCAGG GTAATCA CCTGGGG AAGGAACACAGTGTT 86 92 SFV_RS21360 3967663 .. 3967679 - -6.5 -3.28712 CGTTGTGGCGGAGAA GACGCCC GGA AAGCGTC ATTGTTCATACGGAC 56 319 SFV_RS21345 3966052 .. 3966072 - -4.5 -3.91674 TTCACAGATAAAACA CTCTCCAGG AAA CCCGGGGCG GTTCAAGTAGATACA 59 69 SFV_RS21325 3964101 .. 3964129 - -5.3 -3.52204 GCACCTGGAAAGCAA TTTACCGGAGTAC CTC ACACTACGGCAAA AATGTTTTATTGTTG 56 57 SFV_RS21290 3960701 .. 3960711 - -5.4 -2.57463 AAGTGCGCTGATAAC GATG CCA CATC TGTGGTTGGTGGCAA 50 55 SFV_RS21285 3960257 .. 3960267 - -5.4 -2.50113 TAGCATCGTATTAAC GATG CTC CATC ACCGACCTTTCTGAC 49 10 SFV_RS21280 3959417 .. 3959435 - -3.2 -2.97381 AGAATACCAATTATA TATAATAC GTT GTAATATA TGTATTCCAATTAAA 44 175 SFV_RS21265 NONE SFV_RS21260 NONE SFV_RS21255 NONE SFV_RS21250 NONE SFV_RS21245 3948215 .. 3948262 - -12.9 -2.8547 AGGCTGTATATTATA CTGGCTGTAAACAACATGGCC ACCAAG GACCATGTTGTTTACAGCATA CCCTTGTTGCAAATG 82 49 SFV_RS21225 NONE SFV_RS21220 3946279 .. 3946292 - -2.3 -4.45765 GTGAAAATGAAGAAA TCCTG ATAT CAGGT AAAGAAGCGTTGGTC 61 58 SFV_RS21200 3940813 .. 3940831 - -3 -3.64812 TTGTACCTAAAAAAG CGATTGGC GCT GCCGATGG TATTAAAGGCACCTT 51 297 SFV_RS21160 NONE SFV_RS21155 3933398 .. 3933409 - -4.4 -3.22618 TGTTGACATAACACA GTGT GCTC ACAC GGGGTTAAGGCGCTG 50 30 SFV_RS21150 3933148 .. 3933169 - -17.3 -4.79451 ACGCTAAATATAAAA GGGGAGCGG TTAC CCGCTCCCC TTTGGTGCGACTTGA 100 48 emrD 3931678 .. 3931715 - -5.6 -3.89346 GCGTGATCTGATAAA GCAGCATCGTTCTC CCATGGAGCT GATGACGATGCTGC GGTGACGTGCGCTTA 63 38 SFV_RS21125 3929947 .. 3929957 - -5.4 -5.31275 GTGGAGGAGAAAAAA CAGA AAT TCTG ACGATAATGCCCGCT 83 73 SFV_RS21110 3925627 .. 3925650 - -3.8 -4.08216 TTACGTTGTCGAAAA CGG-TACCGAG CGC CTCGGTCGCCA AAGCTATTCTGGATG 59 81 SFV_RS21095 3922303 .. 3922313 - -3.2 -2.72144 GGAGTCGCCGTAAAT GGTA CTC CACC TAGTATTCGCTGGCA 43 25 SFV_RS21085 3920235 .. 3920264 - -2.1 -5.57729 AAAGAAGAGAAAAAA TGGCTGCATCA AGGGCTTA TGAATCAGCCA TTTAGCCTGAGTTTT 88 183 SFV_RS21070 3918386 .. 3918419 - -9.5 -4.0098 GTGGAACGGAAACAA CCCTACCCG-CGCCAC CGC GTGGCGTCGTGCAGCG ACGTTTAACCTTTAC 81 433 SFV_RS21060 3916097 .. 3916111 - -5.6 -4.07568 GCTTTGCGCGTAAAA CGCCGA TTA TCTGCG GCTTGCTGATCTCCA 65 318 SFV_RS21025 3910742 .. 3910786 - -10 -3.34013 TATGTGCTGAATTAA TCTGTGGGCGGGCAAACAGCA TAAA CGC-GTTTGCCCGCTTACTGA TTATTGGTTTACTGC 76 26 rpmH 3902420 .. 3902433 - -2.3 -3.93695 TTTATTACTTAGAAA CGGTC AGAC GAGCG CGGCCTTTAGCACGA 53 1 rnpA NONE SFV_RS20975 NONE SFV_RS20970 3900120 .. 3900137 - -12.7 -5.83211 TACGAAAAGAAAAAA GGCGGTC AACT GACCGCC CTTATTTTAGCGAAA 100 51 trmE 3898650 .. 3898683 - -15.5 -2.71745 GTGCTAACAATGAAG CGAAGCCGCA-TCTGA CAG TCAGAATACGGCTTCG TAAGCGCGGTTACTT 93 35 SFV_RS20960 3898282 .. 3898300 - -6 -3.12261 TAAATAAACGAGAGA TGGCCTTT GCA AAAGGCAA AATTAAGATATAGCA 56 102 tnaA 3896703 .. 3896729 - -8.1 -3.06492 GGATGTAGGGTAAGA GAGTGGCTA ACATCCTTA TAGCCACTC TGTAGTATTAATTAA 62 37 SFV_RS20950 3895371 .. 3895393 - -13.5 -3.12351 TTTCCTGAGAGGCAA GAAGCCAGC GAATG GCTGGCTTC TTGAAGGATTTAGCC 87 35 SFV_RS20945 NONE SFV_RS20940 3893300 .. 3893319 - -4.2 -3.62046 CTATCGTTTTAATAA CCGGGATG AAGC CATCTCAG TAATACGGGAATACA 53 180 SFV_RS20925 3891778 .. 3891789 - -3 -3.44124 ATTATGAATACAAGA GTAA TCAT TTAC TGGAATGATGGACAG 48 131 SFV_RS20920 NONE SFV_RS20915 3890368 .. 3890392 - -8.6 -4.74132 ATAGCGCATTAAAAA CCCGCCATGCA TGAT TAC-TGGCGGG TTTTTTATTTAGATC 89 34 SFV_RS20905 NONE SFV_RS20900 3887634 .. 3887644 - -4 -3.62096 TTTGAGTAGCCCAAA GATA AAG TATC CCGCTTAACTTAAAG 53 30 SFV_RS20895 NONE SFV_RS20890 NONE SFV_RS20885 3885512 .. 3885522 - -5.4 -2.57463 AAGCGCCCCGAGAAG TACG TAG CGTA AGGATTATTTTACAG 50 30 SFV_RS24530 3884888 .. 3884915 - -6.3 -4.2204 AAGCTGAAGAAATAA GGCCGGA-TGTA TGAAT TACGCTCCGGCC TGTTCTCATTATTTA 70 46 SFV_RS20810 3867708 .. 3867723 - -6.8 -2.82623 TTCGTCTGAGAATGA CGTGCA ACTG CGCACG CGACACCCGGAGACA 53 55 SFV_RS20785 NONE SFV_RS20780 3860681 .. 3860699 - -10.2 -2.71712 GCTGCGCGGTGAAAT GCCGCAGA CCA TCGGCGGC GGTATCGGCCAGTCT 67 144 SFV_RS20770 3859126 .. 3859148 - -8.5 -2.92102 ATATCTGCCATAAAC CGCCAC-CTT TATT AAGAGTGGCG TATTGTACGCTGTGA 65 88 SFV_RS20765 3858593 .. 3858607 - -7.2 -2.66977 CACAACTCAAAAACT GAACAA CGG TTGTTC TTTGGATAACTACCG 57 96 gidA NONE gidB 3855598 .. 3855635 - -5.2 -5.52384 TGCTTACCAAAAAAA GCCACGTT-A-TCTTGTTG ATG CAA-AAGAGTGAACGTGGC GTTAAATGTAACCAG 93 113 SFV_RS20750 NONE SFV_RS20745 NONE SFV_RS20740 3853610 .. 3853622 - -3.3 -3.88331 TTTAAATAAAAGCAA CGCTT ACT ACGCG ACAGCGAACATCACG 55 19 SFV_RS20735 NONE SFV_RS20730 NONE SFV_RS20725 NONE SFV_RS20720 3850073 .. 3850088 - -2.4 -3.56366 AATAACCTGTTTAAA CCGCGG CGGC CCCCGA GACGATCTCGGTGAG 47 5 SFV_RS20715 NONE atpC 3848175 .. 3848196 - -12.3 -5.77853 AACGCGTAAAAAAAA GCCAGCCTG TTTC CAGACTGGC TTTTGTGCTTTTCAA 100 48 glmU 3846478 .. 3846490 - -6.9 -2.63596 CCTCATCCCAGATGA CCGGA TTA CCCGG CCAGAATTACTTTTT 55 32 SFV_RS20700 3844390 .. 3844421 - -13.9 -4.4017 CCAATGTGCATAAAA GAATCCGGAAACA AGTGAG CGTTTCCGGATTC TTACACAGCCACTGG 100 110 SFV_RS20695 3843047 .. 3843074 - -12.8 -3.14132 CCCCCCTTTGAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT 86 8 trkD 3840999 .. 3841023 - -9.3 -5.50723 CCATGAAAACAAAAA CGCCCCCTT ATGAAGA AAGGAGGCG TCTGGCGTTAGATTT 100 33 SFV_RS20685 3840429 .. 3840463 - -5.6 -3.37612 TTTAAGCTGAAGTAA TGCTTCCATGACGGCC TCA GAACGTCACGCCAGCA CAGAGAATGATATTC 56 7 SFV_RS20680 NONE SFV_RS20675 NONE SFV_RS20670 NONE SFV_RS20665 NONE rbsC NONE SFV_RS20655 3836170 .. 3836192 - -13.4 -3.22906 GGATGTCCATAAAAT GCGCCACCGT GTT AGGGTGGCGC GTGCCCTGCTTTTCT 91 108 SFV_RS20650 NONE SFV_RS20645 3833991 .. 3834001 - -4.6 -3.4252 TCTGACCGATGACAA CGCC AGC AGCG GTAACAGTGTTCTGG 53 248 SFV_RS20630 NONE SFV_RS20625 3829860 .. 3829895 - -7 -4.00532 TTTTTAAAGAGCAAA TATCTCAAACATCACC CGAA GATGAGTTTTGAGATA TTAAGGCAGGTGACT 68 61 SFV_RS20620 NONE SFV_RS20615 3826589 .. 3826604 - -6.1 -2.82742 ATTCTTTTACAACCA CCGGT TTTATG ACCGG CTTACTGCTTAATTT 53 44 SFV_RS20610 3826477 .. 3826496 - -2.8 -2.79684 CTACCAATTGAACTA CGCC-CC TAATTAG GGTGGCG GAACGGACGGGACTC 41 21 SFV_RS20605 3826381 .. 3826400 - -10.8 -6.02914 TTCAGATAAAAAAAA TCCTTAGC TTTC GCTAAGGA TGATTTCTGGCAGGG 100 33 SFV_RS20595 3824997 .. 3825009 - -6.9 -5.72616 ACTGACATAAAAAAA GGGCA TTT CGCCC TTTTTATTAATCGTC 100 32 SFV_RS20585 3822973 .. 3822996 - -13.8 -5.47399 TTAAGGTCAAAAAAA CCCCCGGACC TTTC GGTGCGGGGG TCTTAGTTCGTTAAG 100 50 SFV_RS20580 NONE ilvM NONE SFV_RS20570 3819995 .. 3820016 - -11.6 -3.53012 TGTCTGTCTCGTAAA TGGGACGG TGCGTG CCGTCCCA TTTTTTGTATTTATT 85 36 SFV_RS20565 NONE SFV_RS20560 3816514 .. 3816530 - -9.4 -4.82901 GTGTGCGCAGAAAAA GCGGCT ACATG AGCCGC TAATTGAGGCATTCT 95 60 SFV_RS20550 3814010 .. 3814038 - -16.1 -3.24825 GTACCGTAACTAATA GCAAGGCCTTCTC CGG GAGAAGGCCTTGA ACTCTGAATCGCTAT 100 40 SFV_RS20540 3811529 .. 3811553 - -6.5 -4.2558 TATTGCTCAGGAAAA CCAGTGG-CA GAGCTA TGTCCACTGG CCGCTGGAAGTGCAT 70 90 trxA 3808223 .. 3808251 - -4.5 -3.93038 CACCCGAACATGAAA TTCCCTTACGCCA GGT TAGCGTCGAGGAA CTCTTTCAACTGACC 59 2 SFV_RS20520 NONE rho NONE SFV_RS20510 NONE SFV_RS20505 NONE SFV_RS20500 3804205 .. 3804230 - -18.3 -3.61517 ATTCTCTTCGAATAA GCGGCGAGCGC CTTT GCGCTCACCGC AGCAGTGTTGCTATT 100 36 SFV_RS20495 NONE wecC NONE SFV_RS20485 3800732 .. 3800742 - -3.2 -3.08032 CTCCGCTGAAAATTA GCCT TTC AGAC CTAAACGCTCACCCT 45 12 SFV_RS20480 NONE SFV_RS20475 NONE SFV_RS20470 NONE SFV_RS20465 NONE SFV_RS20460 NONE SFV_RS20455 NONE SFV_RS20450 3793579 .. 3793604 - -9.7 -3.18764 ATAAAAAAGCAGACA GGCGACGAAGT GACC ACTCCGTCGCT TTACAAAGAGAGGAA 72 43 SFV_RS20445 3791971 .. 3791981 - -4.6 -3.21276 CGGGGGTGGATAATA CGGG CTT CCCA CCCCTCTGTCTAGTC 50 90 SFV_RS20440 3791867 .. 3791880 - -2.3 -3.72695 AGCGCTGGGACTAAA TGGCG CGCC CGACA GGATTCGAACCTGAG 51 12 SFV_RS20435 NONE SFV_RS20430 NONE SFV_RS20425 3791483 .. 3791498 - -11.8 -5.8901 ACAGAAAACAAAAAA CCCCGC CGAA GCGGGG TTCAAAATTGGTCGG 100 34 SFV_RS20420 3790069 .. 3790080 - -7.2 -3.30243 ATGTAGGCCGGATAA GGCG TTTA CGCC GCATCCGGCAATCAA 63 70 cyaA 3780779 .. 3780814 - -9 -3.01924 CAGTTTCCGCTAAGA TTGCATGCCGGATAAGC CTC GCTT-TCCGGCACGCTC ATCACGAAAAATACT 68 27 SFV_RS20355 NONE dapF NONE SFV_RS20345 NONE xerC NONE SFV_RS20335 3773997 .. 3774030 - -8.1 -2.93708 GCCGCGTAAAAATAG GTTGGGCGGAGAAGCG CAA CGC-CCTCCGCCAAAA AGCTGGGTATATATA 61 53 uvrD 3771785 .. 3771797 - -9.1 -3.9392 TTTTAGGCCAAATAA GGTGC GCA GCACC GCCATCCGGCAACGT 79 40 SFV_RS20320 3769641 .. 3769655 - -3.5 -2.74605 GCGGGTGAAAATGTA CTGGC AAAAA GCCAA TGGCGAAGCGTGGGG 43 181 SFV_RS20310 3769213 .. 3769250 - -6.4 -3.29144 TGAGGTCGCTGACAA CCGCTAAGGCTATC AGCAAAAAGG GATAGCCTTAGGAG TTGATCCTGGATGAC 59 111 SFV_RS20305 3768106 .. 3768133 - -15 -3.62046 GGAGCCTTTGAATAA CAGGTGGCTTAGC CAG GCTAAGCCACC-G CCTTCTTTTTACAAC 100 34 SFV_RS20280 3764690 .. 3764711 - -12.3 -5.27335 TGCCTGAAATAAAAA CAGGCGCTA TTTT CAGCGCCTG CGCGAGAAACTGCAA 100 109 SFV_RS20275 NONE SFV_RS20270 3762092 .. 3762128 - -8.8 -4.58395 GGCATGCGTGAAAAA TAATGTCGGATGCGGCG TAAA CGCCTTATCCGAC-TTA CTCTGAAGACGCGTC 87 46 SFV_RS20260 3760339 .. 3760352 - -2.3 -3.94868 CATAAGAAATTTAAA CCTCT GTAG AGCGG TTTCCGCTGGGTGAG 53 7 SFV_RS20255 3759445 .. 3759489 - -10.2 -3.47322 GGTGATGATAAGTAA CGCCACAATGGAAAACTCTTT GATT AACGAGTAT-CCATTGTAGCG AAGTATCAGGTTGAC 77 62 SFV_RS20250 3758258 .. 3758271 - -6.7 -3.08438 TATTACACCGGAAGA TCTCG CCAG CGAGA CGCTATTAATTTATC 58 305 SFV_RS20240 3755183 .. 3755207 - -14.3 -4.5442 GCTGTAATGAGAAAA GACCGGGTGGT ATT ACCACCCGGTT TGGATTTACCCCCGA 100 31 SFV_RS20230 3753300 .. 3753316 - -9.4 -4.98672 CGCAAAAATACAAAA GGCCGA ACGCG TCGGCC TTCAGACAGGAGAAG 93 45 SFV_RS20225 3751698 .. 3751715 - -2.7 -3.68256 TGCTCATCAAAAAAT TGTTCCA GAAG TGTAACA GATTGGGCGTCGATG 50 78 ubiE NONE SFV_RS20215 NONE ubiB 3748619 .. 3748640 - -2.9 -4.51743 TGATGATTAAACAAA GCCGCATTA TACG TTACACGGC CCGCCTTGAGCGATG 63 47 tatA NONE SFV_RS20200 NONE SFV_RS20195 3746991 .. 3747012 - -15.9 -2.63596 CTGTACTCCATATGA CAACCGCCC TGAC GGGCGGTTG AATTTATTCTTCAGT 100 29 SFV_RS20190 3746162 .. 3746178 - -4.4 -2.85874 TAAAGAGATTAAGCA CAGTGT GAAGA ACACCG AGTTCCGCAAACTCT 48 39 SFV_RS20180 3744041 .. 3744055 - -2.7 -4.67651 ATAGGGCAAAACAAA CGCGC ATCAG GCGCT TTTACCGTTGTTAAA 65 17 fre 3743167 .. 3743200 - -11.7 -3.12895 TCCGGCACCAATATA GGCCTGATAAGACGC GCCA GCGTCGCATCAGGCA TCGTGCACCAATTGC 81 125 SFV_RS20160 NONE SFV_RS20155 NONE SFV_RS20150 NONE hemG 3735517 .. 3735537 - -5.5 -3.21276 TCCGGCCTGACAAGA GGAAATTTA AAA TAATTTTCC GACCGCGCATTTTTT 54 52 SFV_RS20140 NONE SFV_RS20135 3733413 .. 3733448 - -7 -4.00532 TTTTTAAAGAGCAAA TATCTCAAACATCACC CGAA GATGAGTTTTGAGATA TCAAGGCAGGTGACT 68 61 SFV_RS20130 NONE SFV_RS20125 3729749 .. 3729774 - -14.1 -3.85698 CTGGCGCGGCACAAA CCATCGTTGCC AGCC AGCAACGATGG GCCTTGATGACGGAA 100 427 SFV_RS20110 3728582 .. 3728592 - -4 -4.12188 CCATCATCCGGAAAA CATT ACG AATG ATGAAGGATATCATT 59 75 SFV_RS20105 NONE SFV_RS20100 3726896 .. 3726915 - -13.6 -6.01369 TAAATAATAAAAAAA GCCCGTGA ATAT TCACGGGC TTTATGTAATTTACA 100 46 SFV_RS20095 NONE SFV_RS20090 3725662 .. 3725673 - -5.8 -4.13014 GTCATACGCGTAAAA CAGC CAGC GCTG ACGTGATTTAGCACC 65 109 SFV_RS20085 NONE SFV_RS20080 3724531 .. 3724541 - -4 -3.80174 ACAGCGTCAGAATAA GTAA GTT TTAC TCGCCTCTGAATGAG 55 59 SFV_RS20065 3720203 .. 3720228 - -19.1 -5.4505 TCGCCCAATAAAAAA CGCCCCAGTCA TTAC TGACTGGGGCG GCTAAAATATTCAGC 100 249 SFV_RS20055 3718322 .. 3718333 - -3.6 -3.44051 GGGTTATCAGCAGAA CGGG AAGG CCCA CGGCGGCAATCCGTT 50 39 SFV_RS20050 3716606 .. 3716659 - -14.7 -2.5294 TAGGCCTGATAAGAC GCGACCAGCGTCGCATCAGGCATC ATGCTCA GATGCCTGATGCGGCG-TAAACGC CTTATCCGGCCTACA 89 151 SFV_RS20020 3710019 .. 3710044 - -16.3 -3.90762 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTAGCCATCGCTGG 100 68 SFV_RS20010 NONE SFV_RS20005 NONE SFV_RS20000 3705587 .. 3705602 - -4 -2.60054 CACTAAATCAGTAAG TTGGCA GCAT TACCAA TTTTTGCTTCGCCGA 44 24 SFV_RS19995 NONE SFV_RS19990 3704583 .. 3704606 - -3.8 -3.66256 CATACGTCGAAAACA GGGAGGCA TATAATCT TGCCTCCG ATCAGGGCGAGGTTA 53 267 SFV_RS19945 NONE SFV_RS19940 NONE SFV_RS19935 NONE SFV_RS19930 NONE SFV_RS19925 NONE SFV_RS19920 3690330 .. 3690353 - -11 -2.61452 ATGACCGGAATGAAT GAGAGAGGCA GCAC CGCCCCTCTC CATAAGCTACTCTTC 74 32 SFV_RS19905 3688273 .. 3688286 - -3.1 -2.68114 ACATAACACAATTGA TGAAG CCTT CTCCA CTGCATTATTGATTT 42 18 SFV_RS19900 3687334 .. 3687356 - -3.4 -2.59742 CCGAATTCTGATAAT CCTAATGAGT TTT ACTCGTCAGA CTCCCATCCCTACGG 42 21 SFV_RS19895 3687183 .. 3687220 - -6.8 -4.34402 CGGGTCATAGCAAAA CTCCTGAGCAGGCGGC CACTAT GCCGCTTTCACTGGAG TTCTGAATACTGGTA 74 6 SFV_RS19885 3686439 .. 3686460 - -8.9 -3.12351 GTTTTTTATATTCAA GAATGAAAA ATTT TTTTCATTC CTTATGCTCCTTACA 68 20 SFV_RS19880 3685924 .. 3685953 - -10.7 -3.30124 TTGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCATGAACAAC GCGCACGTTGTCAGC 76 67 SFV_RS19845 3679074 .. 3679108 - -13.8 -3.5782 AATTCACGAAATGAA TAAGTCCTGCAATTTA ATA TATATCGCAGGACTTA TTTTAATTAATTGCT 100 32 SFV_RS19795 3670055 .. 3670068 - -3.9 -3.59979 GGTTCTTACCTTAAA TTTTC GACG GAAAA CCACGTAAAAAACGT 53 7 SFV_RS19790 NONE SFV_RS19785 3668145 .. 3668163 - -7.4 -3.69373 GAAAGAGTGGAACAA TACAGGAC GCC GTCCGGTA ACGGTGTTGAGCCTC 66 94 SFV_RS19775 3666220 .. 3666238 - -12.4 -5.67063 TTGATCACAAAAAAA CCACCGCC GTT GGCGATGG TTCATTTTTTAAGCT 100 83 SFV_RS19765 3664922 .. 3664934 - -4.1 -3.44051 GTTCGAGCATTATAA CGAAT GGC ATCCG CATAGTGCGCTGGGT 52 145 SFV_RS19750 3662780 .. 3662796 - -12.3 -3.28712 GTTGCCGCTGTATAA GCGGAGT TAA ACTCCGC ATTTGTAGGCAGGAT 90 124 cpxP 3660013 .. 3660029 - -12.3 -5.9873 TGAGGATAAAAAAAA CCCCACA TCA TGTGGGG GAAGACAGGGATGGT 100 67 fieF NONE SFV_RS19725 3657676 .. 3657692 - -9.4 -4.7497 TTGAGGGATTAAAAA GGCGGA AGAAA TCCGCC TCATATTGCTGACAA 91 211 SFV_RS19720 3656524 .. 3656546 - -6.9 -5.72622 GTGACAAATAAAAAA CCCGGTCGC GAGAA ACCACCGGG TTTGATAATTATCCT 100 48 SFV_RS19715 3655342 .. 3655355 - -2.3 -4.18197 ACGCGGTACTGAAAA CTCAG GGTG CTGCG GCATTCGAAGGTGCG 58 377 SFV_RS19700 NONE treF 3650996 .. 3651033 - -12.9 -3.52073 TCCTGAAGAGGATAA TTTTACAGCCAGCAG GAAGTTAG CGGCTGGCTGTAAAA ATATTATGGTTCGCC 100 29 SFV_RS19680 3649555 .. 3649580 - -16.3 -2.60075 TCCTCCTGAAGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG 100 9 SFV_RS19670 NONE SFV_RS19665 3646367 .. 3646398 - -13 -2.78596 TATGTGCGCATTATA GCCGGATGCGATGC TGGC GCATCTTATCCGGC CTACGGGGAGCCAGG 85 92 SFV_RS19660 3644557 .. 3644581 - -17.3 -3.45434 AAGAAGTGATGATAA TTGCCGGATGT CTG ACATCCGGCAA TTAAACAGATTTAGA 100 176 SFV_RS19645 NONE SFV_RS19640 3640397 .. 3640432 - -6.9 -3.26471 CCACCTGCACAGTAA TGCCTGATGGTGATG AGTTAG CACAACCATCAGGTA TTTATGGATGAGCTG 59 85 SFV_RS19590 NONE SFV_RS19575 NONE SFV_RS19570 NONE SFV_RS19565 3621011 .. 3621052 - -13.2 -4.60797 GCTGGAGAGAGAAAA CCCCCGC-ACGTTG-CAGGT ATGC ACCTGACAACATCACGGGGG CTAATCTTGAACCCA 100 286 SFV_RS19540 3618386 .. 3618404 - -7.3 -4.4715 CGTTAACTCACAAAA CCGGGGC CATGC GCTCCGG TTTACTCAATCAGCT 80 27 SFV_RS19515 3614148 .. 3614166 - -3.9 -4.56736 ATCGAATAATTAAAA GCCATACA AGAC TG-ATGGC AAAGGCAAAACTGCC 66 63 SFV_RS19480 NONE SFV_RS19475 3606228 .. 3606250 - -11.3 -2.66695 GTGCTGACCAAAGAT CTCCCCAGC TCGCG GCTGGGGAA TGGCTGTGCGGGTAA 73 88 SFV_RS19465 3603161 .. 3603188 - -14.3 -3.82481 AGGAAAACTGAAGAA TGCCAGGTGAT TTCTGC ATCACCTGGCA TGAAAGGGATTACAG 100 35 SFV_RS19460 3602080 .. 3602098 - -7.4 -4.55446 CAATAAAGAGTAAAA GCCCGA GCGATTA TCGGGC TTTACTTCACGCAGT 80 47 SFV_RS19450 3600590 .. 3600609 - -13.6 -4.08692 TAATCGGTTGGAAAA CGGTCCTG TCAT CAGGACCG TAAACAGCAATAAAG 100 52 SFV_RS19445 3600095 .. 3600114 - -11.4 -6.32976 AAAAAAATAAAAAAA TCCCCGCC AAAT GGCAGGGA TCTTAGATTCTGTGC 100 54 SFV_RS19420 3597346 .. 3597360 - -7.8 -3.73224 CGACGGTTGATGAAA CCACGG GCT CCGTGA CGTTACGGGCGATTT 69 273 SFV_RS19410 3595754 .. 3595765 - -3 -3.88618 AAGATAATCACGAAA TGAT AAAA ATCA ATTCCCTGTCAGAGA 55 472 SFV_RS19395 3593642 .. 3593689 - -10.8 -3.00259 TATAGAGATTATATA TGAACAGG-AGGAATAGCTGCTT TTA AAGAAGATATTCCGGCCTGTTCA ATATGCAAGGAAGTA 76 62 hdeB 3593236 .. 3593266 - -14.8 -4.93595 ATAAAAATGCAAAAA GGAGCAGCAAGATG GCT CAACTTGCTACTCC TTTTTACTTGTACCT 100 43 SFV_RS19385 3592364 .. 3592374 - -5.4 -3.23853 TTCGCGCAAGCAACA TCAG GTT CTGA GCTGCATTGCGAATC 52 225 SFV_RS19350 3586916 .. 3586932 - -2.1 -4.41616 AGCGCCTGAAATAAA GCGGCGA TAT CCACTGC CGATAGTTGGTAAAG 59 141 SFV_RS19325 3583909 .. 3583935 - -13.8 -3.71649 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAATTACGTTTCCG 100 44 SFV_RS19310 NONE SFV_RS19305 3578596 .. 3578621 - -19.1 -3.86346 TTATTCTTGCAGAAA GCAGGGTAGCG TTAT CGCTACCCTGC TTTACTTTTACACTG 100 33 SFV_RS19290 3575581 .. 3575602 - -11.5 -3.14218 TACGCACCAAAACGA GCGGGTCAG TTTA CTGGCCCGC TTTTTTTATGCGTTA 81 56 SFV_RS19280 3572307 .. 3572327 - -15.5 -5.7946 CCGCCAATAAAAAAA CACCACCTG ATA CAGGTGGTG AAAATGTAAAAACAA 100 330 SFV_RS19275 NONE SFV_RS19270 3571325 .. 3571339 - -7.8 -2.70704 AGGCGTTAAATGAAG CTCGCC TTG AGCGAG ATATATTAAAAAAAG 57 92 SFV_RS19260 NONE SFV_RS19255 3568636 .. 3568667 - -13.9 -4.00066 TCGACAACTGATAAA TCCGCGTTCACTA ACAAGG TAATGAACGCGGA ACCAACCTACAACGC 100 430 SFV_RS19250 3567797 .. 3567811 - -2.8 -4.41548 TGACAGTCGATAAAA CATGGA ATA TGCATG GCATAAAAATATTCA 60 57 SFV_RS19245 3566545 .. 3566556 - -4.4 -4.27117 TTCCCATAATATAAA TTCG CAAT CGAA CGCGTAATATCTGTC 64 189 SFV_RS19230 3563970 .. 3563992 - -5 -4.84761 ACATCTTCACAAAAA TAAATTATGA ATT TCTTAATTTA GAAACTATAAACATG 75 30 SFV_RS19225 3563302 .. 3563322 - -12.6 -5.1925 TTATAAGTTAAAAAA GGCGGGAT ATCAA ATCCCGCC ATGAAATTAACTAAT 100 49 SFV_RS19215 NONE SFV_RS19210 3560728 .. 3560744 - -7.3 -3.68988 CGTTAGCCAACAGAA TACCGAT GAT ACCGGTA TTTACCTGTCTGTCC 63 280 SFV_RS19200 3559688 .. 3559702 - -2.9 -4.07103 AAAAAAACAACAGAA TAAGA ATTAA TCTTA GGATAAATATTTATT 56 134 SFV_RS19195 NONE SFV_RS19190 3557807 .. 3557843 - -6 -3.60074 GAGAAAGTCCCTAAA GATTGTAGAGGCGT CATCAGTAC ATACCTCTACAATC GATTAAGAAAACCTA 62 89 SFV_RS19185 3555704 .. 3555727 - -8.2 -2.57344 GACGCGTGTTACAAC TGCCGCCGAAC GAC GTTCAGCGG-A TTCTTCCATCCGGGA 59 321 SFV_RS19180 NONE SFV_RS19175 NONE SFV_RS19170 NONE SFV_RS19165 NONE SFV_RS19160 3549959 .. 3549987 - -14.9 -3.48814 AAGAAAAGATATTAA CTGAACTTAATTT ATA AAATTAAGTTCAG TTGCATAGATAGATC 100 82 SFV_RS19115 3541209 .. 3541231 - -7.6 -3.27923 CTGGAAGATCAGCAA CGTAGCCGCG ATC CGCAGCTGCA AGTGGTAACCAATAA 62 243 SFV_RS19100 3539589 .. 3539614 - -8.3 -3.83724 AGGAGATAAGGCAAA CCGATCGCA ACATTGAG CGCGATCGG TCCCCTCGCCCCTCT 75 95 SFV_RS19085 3536179 .. 3536205 - -3.1 -5.22039 TTTAAAGTTAAAAAA TAACCTTATTG TTCGC CAACAAAGCTA ACAAAGCGCGTTCCT 77 4 SFV_RS19070 NONE SFV_RS19065 NONE ftsX 3531970 .. 3532022 - -5.6 -3.68292 ACCGGGAAGAGACAA CG-GGGGT-CTCTTTCCCTGCTACGG AAC CCATTGCAGGGAAAGAGTATAACACG CTTTTATTATTCAGG 59 32 SFV_RS19055 3530888 .. 3530907 - -7.8 -5.75538 CCCAAAAAACAAAAA CCCCGGAC TCTC ATCCAGGG TTCTCTGCTTAATAG 100 47 SFV_RS19050 3529475 .. 3529486 - -7.2 -3.30124 TTGTAGGCCGGATAA GGCG TTTA CGCC GCATCCGGCATGAAG 63 94 SFV_RS19035 3527411 .. 3527431 - -14.7 -2.73159 GTAACCTTTCTAAAC CCGCCCGCA TTT TACGGGCGG TGGGATGATCACTTG 89 34 SFV_RS19030 NONE livM 3525185 .. 3525198 - -3.1 -2.97503 TTAACAGATAATAAT GGC-TG ACT CATGCC TGCTCTCCTTTCGCT 44 19 livG NONE livF 3523679 .. 3523694 - -9 -3.53811 GTCACCTGTCTCAAA GGAGTC TTTT GACTCC TTATCAATCAACGTG 73 44 SFV_RS19010 3523516 .. 3523528 - -4.1 -3.03925 GCGGAAAAATAGAAG GTCTG AAT CAAAC TCTACAGATTACTCA 47 46 SFV_RS19005 NONE SFV_RS19000 NONE SFV_RS18995 NONE SFV_RS18990 NONE ugpQ 3518388 .. 3518421 - -9.5 -4.0162 GCCGGAGAGGAGAAA CGGCGACATGCTGAA TCAG CCCAGCACGCCGCAG CCTGACATTCCGTTG 81 45 ggt 3516123 .. 3516143 - -9 -3.05715 AAGTTTGTCATTTAA GCCCTCACC TACC GG-GAGGGC TTAAGATATTAATAC 68 34 SFV_RS18965 3514178 .. 3514193 - -3.2 -2.94099 GCCTGGGATGATAGA GGGTGA AAAT TGACCC CTCTGTTCAAAAAAA 44 67 SFV_RS18960 3513336 .. 3513367 - -13.6 -4.10429 AACGACGCGGCAAAA CCCCGGAAGCGTGC ATCA GCACGCGACCGGAG CGAGCGAGGAAGCCT 100 75 SFV_RS18955 3512091 .. 3512117 - -3 -5.01845 TACAAGAATTAAAAA TGTTACGGGTAA CTG TTATCGGCAACA TTGTCCAGCCGGACA 70 106 gntK NONE SFV_RS18945 3510155 .. 3510180 - -12.6 -3.63922 AGTTTTTCGAAAAGA GCCCGGTAGC GTCACA ACTACCGGGC GAACAAACTTAACTC 95 34 SFV_RS18935 3508208 .. 3508225 - -9.8 -3.15996 TATTACGCACTAACA GGGGCG GCATCG CGCCCC AGATTTAATGAATAA 72 44 SFV_RS18930 NONE SFV_RS18925 NONE glgC NONE glgA NONE SFV_RS18910 3498493 .. 3498518 - -9.8 -5.61596 ATGTGCATAAAAAAA TCCGGAAACA AGTGAG CGTTTCCGGA TTCTTACACAGCCAC 100 110 SFV_RS18905 NONE SFV_RS18900 3496613 .. 3496637 - -8.5 -2.68835 GACAAACACAAAACT GCCTGATGCGC TAC GCTTATCAGGC CTACGTGGTTTATGC 63 143 glpE 3494525 .. 3494542 - -6.3 -4.01888 AGGGGACAGTATAAA GCGTTACG CGC CGTA-CGC CACCTCTGCGGGAAA 68 11 SFV_RS18885 NONE SFV_RS18880 3492808 .. 3492820 - -9.1 -2.76404 GCCAGGGAAAAGCCA GCGTC AAT GACGC GGATCGGCTACGCAA 63 83 SFV_RS18870 NONE SFV_RS18865 3488549 .. 3488567 - -11 -2.55074 TCGAAGGCGAAGCGA TGGCGCAA CAA CTGCGCCA GCTGATTCAACTTAA 69 435 SFV_RS18855 NONE malQ 3481092 .. 3481121 - -12.3 -2.53822 GTGATTTGATAACAC TGACTGCCGGATGC ATC GCATCCGACA-TCA ACCGCACTCTACTTC 81 34 SFV_RS18830 3476907 .. 3476918 - -3.6 -3.64162 ATGAAGCATGGTAAA GGCA CGGA CGCC ACATCGTGGTGAGAT 53 372 ompR NONE envZ 3465690 .. 3465711 - -13.7 -4.65153 TTATAGAAAGCAAAA CGGGAGGCA CCTT CGCCTCCCG TTTATTTACCCTTCT 100 31 SFV_RS18760 NONE SFV_RS18755 3461785 .. 3461819 - -7.9 -2.79023 TAAGTTCATTAATGA GTA-TGTCCGGCAGAG AGGG CTCTGCCGGATTTTAC GACTTAATGGCCTGA 60 122 nudE 3456561 .. 3456574 - -9.5 -4.72272 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTCAGTTGGCTGA 91 169 SFV_RS18720 NONE SFV_RS18715 NONE SFV_RS18710 NONE SFV_RS18705 NONE hofQ 3450437 .. 3450453 - -6.5 -5.06451 GATTAGCGTAAAAAA GACAGCA AAA TGCCGCC TGAATGATAAATCAT 83 167 aroK NONE aroB 3448494 .. 3448512 - -11 -3.15621 AACCTGAAGCTAATA GACCGCTT GAT AAGCGGCC TGACCTTTCTTGTTG 78 41 SFV_RS18685 3447062 .. 3447083 - -6.6 -2.97613 GATTAACTAATTACA CCTTCTCC GGCTGT GGAGAAAG CTCCGACAGCATCCA 56 92 SFV_RS18680 NONE SFV_RS18675 NONE SFV_RS18670 NONE SFV_RS18665 3443621 .. 3443634 - -9.5 -5.70829 AAGAGGATAAAAAAA CCGGG TTTC CCCGG TTTCAGAGTGATGAC 100 155 SFV_RS18660 3442596 .. 3442606 - -2.4 -3.61398 CCTTTCGTTTAATAA CTGG GTT CCTG TTCCCCACTCACCAC 49 8 SFV_RS18655 3442159 .. 3442176 - -2.8 -3.90112 GTTCCTTGAATTAAA TATTCA TTTTTT TGAATA TTTAGGTTGTGCGAC 54 59 SFV_RS18650 NONE SFV_RS18645 NONE SFV_RS18640 NONE SFV_RS18635 NONE SFV_RS18630 NONE SFV_RS18625 3435940 .. 3435975 - -19.9 -3.30124 CCGTAGGCCGGATAA GATGCGCCAGCATCGC ATCCG GCGATGCTGGCGCA-C TGAATTTTACATCCC 100 134 SFV_RS18565 3422826 .. 3422847 - -17.3 -3.46602 GCCGGGAGAGCAGAA GCGCGGGCA AGAT TGCCCGCGC GAGAAATCATTACGG 100 35 SFV_RS18560 NONE SFV_RS18555 NONE SFV_RS18550 NONE argD 3420040 .. 3420067 - -8.4 -2.93853 ATACAGGCTAAACCA TCGGATAAGGCA TTCA CGCCGCATCCGA CATATTTTGCCTGAT 65 50 SFV_RS18525 3416517 .. 3416540 - -6 -3.79687 ATGCCGGATAAAATA CTATCCGGCT TCAC AACGGGATAG TTAAGTCACGCGGCA 64 31 SFV_RS18500 3411727 .. 3411738 - -2.2 -3.68256 CTGCGAGTAAAAAAT CGGA ACCT TCCA TCAGCGGCCTCCTGG 49 26 SFV_RS18495 NONE SFV_RS18490 NONE SFV_RS18485 3409032 .. 3409046 - -12.8 -5.42259 TGAGGCGTAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACCTTT 100 47 SFV_RS18475 3407736 .. 3407757 - -17.3 -5.7946 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAATGCTTATT 100 36 SFV_RS18470 NONE SFV_RS18465 3406499 .. 3406517 - -3.8 -3.40403 TTCGTTTCATCAGAA CTGTACCA CCC TGTCACAG GTCAGCGAGGCTTCC 50 1 SFV_RS18460 NONE SFV_RS18455 3405761 .. 3405783 - -12.8 -4.7268 AAACACGTAATAAAA CGTCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG 100 81 SFV_RS18450 NONE SFV_RS18445 NONE fusA 3402510 .. 3402535 - -15.5 -2.78935 ATATTCCTTACTATA GTGCTCTCCCC TTCA GGAGAGAGCAC GGGACTTTGGTATTA 93 51 tuf 3401261 .. 3401276 - -11.8 -4.72986 TACGGGCAGCAAAAA GGGCGC CGAA GCGCCC TTTTCAATTCAAAAC 100 55 SFV_RS18430 NONE SFV_RS18425 NONE SFV_RS18415 3399674 .. 3399688 - -8.6 -2.52795 AATTCGGCTAACTGA GGTTCA GAT TGAACC TGCTGTCAACTACGA 63 3 rpsJ 3399221 .. 3399235 - -3.5 -2.72379 TCAATCGCTCAATGA CCTGA TTAAC CCAGG CTGATCTGCACGTCT 43 16 SFV_RS18405 NONE rplD NONE rplW NONE SFV_RS18390 NONE SFV_RS18385 NONE SFV_RS18380 NONE SFV_RS18375 NONE SFV_RS18370 NONE SFV_RS18365 NONE SFV_RS18360 3394531 .. 3394556 - -14.9 -5.252 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG 100 50 SFV_RS18355 NONE rplX NONE SFV_RS18345 NONE rpsN NONE SFV_RS18335 NONE SFV_RS18330 NONE SFV_RS18325 3391517 .. 3391527 - -3.2 -3.32963 ACCTCTACCTTAGAA CTGA AGG CCAG CTTCACGGGCAGCAT 48 9 SFV_RS18320 NONE rpmD NONE SFV_RS18310 NONE secY NONE SFV_RS18300 3388826 .. 3388855 - -12.3 -4.6645 TACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA 100 55 SFV_RS18295 NONE SFV_RS18290 3387969 .. 3387987 - -4.4 -4.18763 AACAAACCTGGAAAA CGAGGCGT TAT ACGCGACG TTTTTTCGGCGGACG 64 14 SFV_RS18285 3387319 .. 3387337 - -10.4 -3.14132 TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT 74 10 SFV_RS18280 NONE rplQ 3385849 .. 3385862 - -9.5 -5.61596 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT 100 46 SFV_RS18270 3385085 .. 3385101 - -3 -4.3467 AGTTGCAGAGGAAAA CGC-TGT CGAA ACATGCG GAGATGGCGAAGGCG 62 350 SFV_RS18230 NONE SFV_RS18225 3376638 .. 3376649 - -2.2 -3.29511 CTGATTTTGCCATAA CAAC TTAT GCTG AATTAAAGAAATGAT 45 40 SFV_RS18220 NONE SFV_RS18215 NONE SFV_RS18210 NONE SFV_RS18205 3374311 .. 3374324 - -2.3 -4.77173 GTCCCACAAAATAAA CGGCT GGAG AGCGG ATATCTGTATCTCGG 68 140 SFV_RS18195 NONE SFV_RS18190 3371666 .. 3371701 - -7 -4.00532 TTTTTAAAGAGCAAA TATCTCAAACATCACC CGAA GATGAGTTTTGAGATA TCAAGGCAGGTGACT 68 61 SFV_RS18185 NONE SFV_RS18180 NONE SFV_RS18175 NONE SFV_RS18170 3368148 .. 3368167 - -13.6 -5.0925 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA 100 42 SFV_RS18140 3362705 .. 3362719 - -5.6 -5.21683 AGTGAAAAAAAGAAA GACCGG CAA CCTGTC AAAACGAAGCCGGTT 88 352 SFV_RS18080 3354653 .. 3354663 - -2.4 -3.75024 GGCCATCATTAATAA CCAG ATC CAGG GTCGCACGCTGGTGA 51 109 SFV_RS18070 3351607 .. 3351630 - -3.8 -4.14243 TATTCTACGTGAAAA CGGATTAAAC GGCA GGTTAAACCG AGTATCTTTGTGAAT 59 18 SFV_RS18060 3350235 .. 3350268 - -11.7 -2.78596 TATTCTCGTATCAGA CCAGGCAGGGTAAAC AGAC GCTTCCCCTGCCTGC ATCCGATTACTCTTC 79 32 SFV_RS18055 NONE SFV_RS18050 NONE SFV_RS18045 NONE SFV_RS18040 3346547 .. 3346567 - -2.4 -2.63208 TGTGACTCAAAAACC CTTTGCCG GATGG CGGCCCAG CATCTGTTTACATCA 39 33 SFV_RS18035 NONE tldD 3341095 .. 3341105 - -2.6 -4.08216 TTATCCTTCTGAAAA TAAT GAA ATTA TTACGCAGTACCGCC 56 26 SFV_RS18020 NONE SFV_RS18015 3338733 .. 3338744 - -2.2 -2.97029 CGTGATTAACCAAAC TCAC GCAG GCGA TGGGCCATTTTACGG 41 4 SFV_RS18010 3336724 .. 3336742 - -11.7 -5.17353 ATAGCCATGAAAAAA CCGACGC TTTTG GCGTCGG TTTTGACTTAACTAT 100 33 SFV_RS18005 3336356 .. 3336376 - -8.1 -2.78384 TTTTGTCCGACGATA TTGCCCCCG GTT CGGGGGCTT TTTTTTGCGCTAATG 60 35 SFV_RS17990 3333819 .. 3333836 - -8.4 -5.45802 TGCTCAAAACAAAAA CCGGAG TCTGTG CTCCGG TTTTTTATTATTCGC 100 48 SFV_RS17970 3329306 .. 3329316 - -2.6 -3.59814 CCAGCACACAAAAAG TTTT GGG AAAA AAACTTTCTTGTAAC 50 109 SFV_RS17965 NONE SFV_RS17960 3328293 .. 3328306 - -9.5 -5.64274 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCAAATTG 100 64 sspA 3327317 .. 3327327 - -3.2 -2.60797 TCCATACAGATTAAC TCCG GCC CAGA CGCATTTCACGTTCT 42 10 SFV_RS17950 3326778 .. 3326808 - -12.7 -4.77157 TTAAGTCATTAAAAA GACAAAACAGGCC GCCTG GGCCTGTTTTGTA TTACTTCACAACGCG 100 26 SFV_RS17935 3323364 .. 3323379 - -2.6 -2.91276 GCTTGTCTGATAAAC GATATA CCTT TATACC TGTTATACCAGATCA 42 98 SFV_RS17930 3322389 .. 3322439 - -11.2 -2.89683 ATTGTAGGGTACAGA TGCGTTTATTTCCCCTCACCCG GTAGGGG CGAGCGAGGGGAAAACAACTCA CCCGCGCTCTTGCAT 78 23 SFV_RS17925 3320810 .. 3320829 - -10.7 -2.78679 TTCCCTTAGCGAAAG GCCCGGT ACATAG ACCGGGC AACAGGATTAACTTT 74 33 SFV_RS17920 NONE SFV_RS17915 NONE SFV_RS17910 3318766 .. 3318779 - -2.5 -4.20783 ACCTGATCTAATAAA TTTAA GCCA TTAAA TCAGCCTTAACCTTC 58 13 SFV_RS17875 3308944 .. 3308956 - -3.3 -2.71263 AATTCCCCTCAACGA CCTAC TCC GTTGG AGGTAGCCACGGACG 43 14 SFV_RS17870 3306418 .. 3306428 - -2.4 -3.90048 GCGGCCTGAAAAACA GTGC TGT GCCC TTGTAACTCATCATA 53 110 SFV_RS17865 NONE mtgA 3304466 .. 3304479 - -5.9 -3.06162 GACTGGAGTGGAATA CCGCG CTAT CACGG TACCGTTGAGACGGA 53 452 SFV_RS17795 NONE SFV_RS17790 NONE SFV_RS17785 NONE SFV_RS17780 NONE SFV_RS17775 3292717 .. 3292741 - -7.2 -5.05712 ATAAATAAGCAAAAA GCCTCG-CTGA TAAA TCAGACAAGGC TCGACTTGCAGGCAG 86 85 SFV_RS17770 NONE SFV_RS17765 3290988 .. 3291000 - -4.8 -3.52102 AGTTTATCGACAGAA CGCA GTTGA TGCG TAGCTACACTAAACC 53 98 rplU NONE rpmA 3288652 .. 3288673 - -15.9 -4.75174 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG 100 54 SFV_RS17740 NONE obgE 3286244 .. 3286270 - -18.1 -4.71382 ACAATTAGTCAAAAA GAAACCCCGGC GCATG GCCGGGGTTTC AGATTATTGACAAAG 100 177 greA 3284016 .. 3284030 - -12.8 -4.36914 TGTTCGTTGATAAAA GGCCGC AGA GCGGCC TTTTTCCTTTCTTTA 100 74 rrmJ 3282806 .. 3282820 - -2.8 -3.40899 AACCTCTTATTACAA CTGTGT TAA AAACAG CGTCAGGATACTCTA 46 80 hflB 3280786 .. 3280805 - -12.8 -5.56673 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA 100 61 folP NONE glmM 3278534 .. 3278546 - -3.3 -5.24129 TTCGCCGAGAAAAAA TGCGA CAA TCGCC GCCTTTTTAGCCAGT 77 52 secG NONE SFV_RS17690 3277875 .. 3277906 - -14.6 -4.32436 AGACCAGGACCAAAA CGAAAAGAGACGCT TTTC AGCGTCTCTTTTCT GGAATTTGGTACCGA 100 32 SFV_RS17685 3275650 .. 3275669 - -2.1 -4.68593 CTGACGATGGAAAAA GGCGA CTCGGTGTTC TCGCC AGATGATCGTATTGG 66 184 SFV_RS17675 3273912 .. 3273927 - -10.4 -5.60689 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA 100 151 SFV_RS17670 3273402 .. 3273418 - -6.5 -2.51207 CAGACTATTAAAAGT GGGGAAC CAG GTTCGCC TTCTGGATATTACTC 53 1 nusA NONE infB 3269065 .. 3269079 - -11.4 -5.24129 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT 100 152 rbfA NONE truB 3267578 .. 3267604 - -2.3 -4.06361 GTATATAGAATGAAA GGA-CGCCGA TCTCTAAT TCAGCGATCC CAGTGTACGTTACGC 55 118 SFV_RS17645 3267241 .. 3267257 - -10.8 -5.03314 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG 100 47 SFV_RS17640 3264864 .. 3264885 - -15.1 -4.07568 CCTGCCCGGTTAAAA GCCCCCCGC CGCA GCGGAGGGC AAATGGCAACCTTAC 100 37 SFV_RS17635 3263844 .. 3263869 - -7.5 -4.04023 ATTAACGAACAACAA CGCCCTCACCC GTTA AGGTGATGGCA ATCAAAAAAGATTAC 72 60 SFV_RS17630 3261769 .. 3261791 - -10.6 -5.82281 AAAGACAGAAAAAAA GCCCCGAT GGTTAAA ATCGGGGC TGTATATATTATTTT 100 69 SFV_RS17620 3259963 .. 3259975 - -3.4 -4.56597 GCTCGGCTGGAAAAA CCAT ACGCG ATGG TGTGCATCAATATTA 65 487 SFV_RS17600 NONE SFV_RS17595 3255965 .. 3255989 - -4.9 -3.60151 CGCGGGAAAGGAGAA CTGACGCTG GCGTTTT CTGCGCCAG TGGGCGACCGTTCGC 55 155 SFV_RS17585 3255282 .. 3255298 - -10.1 -2.70946 GTGGTTGATAAAGAT CAGCTGG TTA CCAGCCG GACACCGGACGATCT 67 63 SFV_RS17575 3254007 .. 3254017 - -5.4 -2.65264 TGACCAGTCATAGCA TTCC CCA GGAA TAAGTTATGATAATT 50 83 SFV_RS17570 3252926 .. 3252937 - -7.2 -3.30124 CCGTAGGTCGGATAA GGCG TTTA CGCC GCATCCGACATGTTT 63 50 SFV_RS17545 3248299 .. 3248331 - -11.5 -4.07885 CATGGTGCGGTAAAA GAAGACGTTGCGTT TTGATT AACGCAACG-CTTC GGCACTGTTACCCCT 91 33 SFV_RS17530 3245896 .. 3245911 - -6.8 -2.82623 TTCGTCTGAGAATGA CGTGCA ACTG CGCACG CGACACCCGGAGACA 53 55 SFV_RS17520 3244907 .. 3244921 - -3.6 -3.19602 CGGTTCACAGCAAGA CTATTG GGG CAATAA CGAGAAAAACAGTAA 47 182 SFV_RS17500 NONE SFV_RS17495 NONE SFV_RS17490 NONE SFV_RS17485 NONE SFV_RS17480 NONE garR 3238217 .. 3238228 - -7.2 -2.66316 CCTGTTACCACATGA CGCC GGAG GGCG TTTCTCTTATTCGGC 57 88 SFV_RS17470 3236604 .. 3236631 - -15 -4.07568 TCTGCCCCTCCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTAAAACAGGTGAAA 100 443 SFV_RS17450 3232493 .. 3232513 - -2.5 -3.54146 CGCCTGAATTAAATA TGTAGGTAA CCG TAACCGACA CCTGCAAAACAGACA 48 75 SFV_RS17445 NONE SFV_RS17440 NONE SFV_RS17435 NONE SFV_RS17430 NONE SFV_RS17425 3226116 .. 3226150 - -11.5 -3.05384 TTGCCGTTCAGTGAA GTGGAGCGGAACGACC TTGC GACCGTCCCGCTC-AC GAGGCTTTACGCACT 79 32 SFV_RS17420 3224679 .. 3224696 - -11.3 -6.00086 AGATCACAAAAAAAA GGTGCAC ATTT GTGCACC CAAGGATGAAAGCTG 100 50 SFV_RS17415 3223096 .. 3223110 - -2.8 -4.90217 CAAACATATTAAAAA CCTTAA AAT TTCAGG TAAATCAAGAAAATG 70 30 SFV_RS17410 3221639 .. 3221683 - -12.2 -2.80724 CAACAAATTAAACAC CCCGTAGGCCGGATAAGATGC GCCA GCATCGCATCCGGCAT-CAGG TACAAAACACAACAA 79 119 SFV_RS17395 3219650 .. 3219667 - -9.9 -3.37796 TGTCAGCAGTCAGAA GCACCTT GTGA AAGGTGC TTAATAGATTATTTT 74 34 SFV_RS17335 NONE SFV_RS17330 3208833 .. 3208864 - -24.6 -3.43564 TAACGTAAGTTATAA CGACGAAGCCGCCT TATC AGGCGGCTTCGTCG TTTATATAGAAAAAA 100 62 SFV_RS17320 NONE SFV_RS17315 3204066 .. 3204090 - -12.9 -4.21922 GTATGGAAAAGCAAA CGGCGCTTCAC ATT ATGAAACGCCG TTTTTTATTAACAAC 100 52 SFV_RS17310 3203462 .. 3203472 - -2.4 -3.34517 ATCGTCTGGCAAATA GCGC CCT GCGT AATTAATTGTTTAAC 45 36 SFV_RS17280 3196786 .. 3196817 - -12.2 -2.52795 AACGTGCTGAACGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA GGTAACTCCCAATCT 79 40 SFV_RS17275 NONE SFV_RS17270 NONE SFV_RS17265 3195646 .. 3195661 - -4.6 -3.76641 AGGGCAAGAGCCAAA CCGCGC GCTG GCGCAA CCGCTGATTGATAGC 58 184 SFV_RS17220 3183178 .. 3183206 - -14.7 -3.9344 AAGCGTAATATCAAA TCGGATGGCGA TACGACG TCGCCATCCGA TCTTTTTATACGACG 100 31 SFV_RS17210 3179648 .. 3179663 - -3.3 -5.72622 TGCACAAATAAAAAA GATCA TTGCGG TGATC GACCGCGCCGCTTTT 100 215 SFV_RS17200 3178012 .. 3178033 - -14.5 -3.91597 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT 100 46 SFV_RS17190 3177246 .. 3177271 - -16.3 -3.90762 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCCCCCGGTG 100 48 SFV_RS17165 3170382 .. 3170413 - -2.3 -2.52464 TGTTGCTTTAAGTGA GGACGGTGCCGGAAA TTGC TCTCCGGCACC--CA ATAGTTTTACGCAGC 39 32 SFV_RS17145 3165972 .. 3165984 - -3.3 -3.22909 TTAAAGGAGGAAAAG GCGTT GCT ACCGC TTTTGGAGCAATCGC 46 254 folB NONE SFV_RS17130 3164131 .. 3164163 - -8.9 -3.22491 AAACGTTAGCACGAA CCGTCCCCTCGCCCC TTC GGGGAGAGGGTTAGG GTGAGGGGAACAGAC 70 130 SFV_RS17115 NONE SFV_RS17110 NONE SFV_RS17105 NONE SFV_RS17100 3156078 .. 3156097 - -11.4 -3.71649 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTATAGAAGGAAAG 88 224 ribB 3150634 .. 3150655 - -5.1 -5.46706 AGGGCAAAATAAAAA CCGAAGCCA GCTA CAACTTCGG TTTCTTGATTAAGGC 87 60 SFV_RS17055 3150210 .. 3150242 - -13.6 -3.80746 TGGTTAAAAACAACA TCAGAAGTTGTCCA GCACA TGGACAACTTCTGC CAGCTTCACGAAAGC 100 42 SFV_RS17045 3148469 .. 3148490 - -15.9 -2.84619 GAATAAGCCACGATA CCGGATGGC ACTC GCCATCCGG TAATTGTTAGCCTAT 100 32 nudF NONE SFV_RS17015 NONE SFV_RS17010 3142884 .. 3142898 - -2.8 -2.93769 AAAGAAGCGTAGACA TCAGTA GCC TTCTGA AGCGGTATCAGGTTG 42 11 SFV_RS17005 3142310 .. 3142321 - -4.4 -2.88544 GTTGATCGTCAGAGA TGGT GCAG ACCA AGAAAATCGACGATC 48 7 SFV_RS17000 3139872 .. 3139883 - -2.2 -4.13995 GTTCCATAAAGCAAA CCAA TTCC TCGG TATGGAACCGCTGCC 56 524 SFV_RS16985 3138381 .. 3138391 - -6.8 -3.1355 GCGACTGACACTCAA TGCC CAC GGCA TCAAACGCACCGGAC 57 391 SFV_RS16970 3136130 .. 3136152 - -9.1 -2.90496 CTCCCTGCGAAATTA TTCCCGGGA ACGCG TCCCGGGAG CGGTAACAATTACGG 67 35 SFV_RS16965 NONE SFV_RS16960 3135184 .. 3135210 - -11.5 -3.0497 AGATCAGCGTGAATA GCGCCGCCGGA CGTGC TCCGACGGCGA TAAAGGCATCAATGT 79 224 SFV_RS16955 3132675 .. 3132690 - -2.6 -4.07568 CCGCTCTCTGGAAAA GCGTATT GTT AAT-CGC AACGCATGAATAAAC 56 158 SFV_RS16950 3131810 .. 3131836 - -2.2 -3.33151 CTGGCTAAAGTAATA CCGTGCAGGAAA GTG TTCCCCGCAAAA ATACAGATTGCCGAC 45 41 SFV_RS16945 3130331 .. 3130363 - -12.8 -2.6993 AGAAATCGAAAGGTA TTCCATACTCGCCC TCCTC GGGCGAGTATGAAG ATTACGGTACCGGAT 82 27 SFV_RS16940 3128041 .. 3128068 - -12.7 -5.73339 AGAATGATAAAAAAA TCCCCGGCAGC ATGTCA GTTGCCGGGGA TTTTTTTTAACGTCC 100 32 SFV_RS16915 NONE SFV_RS16910 3123269 .. 3123288 - -2.1 -3.16288 TAAACGCCATGAAGA TCAGGTA ATGACG TTCCTGA TGATCCTGCCAATTG 43 148 SFV_RS16895 NONE SFV_RS16890 NONE SFV_RS16885 3119701 .. 3119727 - -13.8 -5.44119 TTTAGGTTAAAAAAA TGCCCGGTTG TGAAAAG CAACCGGGCA TCATTGTGAATTCAC 100 265 SFV_RS16875 3118098 .. 3118118 - -15.4 -3.62775 ATGACCTGTTAATAA CGGGCGCG CGAAC CGCGCCCG AATCAGATCAGTGAT 100 33 SFV_RS16865 3115906 .. 3115921 - -5.4 -2.87931 CTCATTCGTTATATA TCGCCA TATA TAGCGA TATTTTAGGCAAAGA 51 106 SFV_RS16860 3115600 .. 3115614 - -2.8 -3.14931 CGTATGTTTGATCAA TTTTCG AGG CGATAA CCGGCCATAAAAAAG 45 7 SFV_RS16855 NONE SFV_RS16850 NONE SFV_RS16845 NONE SFV_RS16840 NONE SFV_RS16835 NONE hybD NONE SFV_RS16825 NONE hypA 3109023 .. 3109043 - -2.5 -3.86346 CGATTGCCGGACAAA CGCGAAAAA GAA CCTTTAGCG GGTGTTCCCTCTCAC 54 105 SFV_RS16815 3108693 .. 3108724 - -13 -2.58579 GCAATCGTGCACAAT GCCTGATGCGACGC TGCC GCGTCTTATCAGGC CTACAAAAGCTAATC 84 42 SFV_RS16805 3105637 .. 3105673 - -13.2 -3.16668 GAATATTTTGATTAA TCCCCGTACTAATTAT TCTTC ATAATCAGTACGGGGT TGCTACAACATGTAT 91 40 SFV_RS16800 NONE SFV_RS16790 3102654 .. 3102682 - -2.9 -3.35679 TGCGCGGATCTACAA CGCGGTGTTGCAG CGG CTGCCGCACGTCG CTCAGCGCGCAGCGC 47 278 SFV_RS16780 3101344 .. 3101373 - -3.5 -2.78018 ATTTGTGAGGAAGGA TCCGGCGCGTAAT AGAG ATTATGCGGCGCA ACGGCCTAGGAGATC 43 31 SFV_RS16775 NONE glcE NONE glcF NONE SFV_RS16760 NONE SFV_RS16755 3095361 .. 3095386 - -12.6 -2.83164 GCAGTTACTATCATA GCCCCGACAA TAAAAC TTGCCGGGGC TTTTTTGACGCTATT 82 39 SFV_RS16750 3093414 .. 3093440 - -5.1 -3.92005 ACAGACAAATGGAAA GCCGGGTGA TATTTACCT TCATCCGGC TTTATTGATTTACGA 61 35 SFV_RS16745 3090892 .. 3090906 - -5.8 -2.79518 GCAAAAGGTGGAAAG CAATTT AAC AAATTG AATTAAAAGGGTTTA 50 478 SFV_RS16725 3086876 .. 3086897 - -11.5 -5.30616 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTATTCTTAC 100 37 trmB NONE SFV_RS16695 NONE SFV_RS16690 3081534 .. 3081557 - -8.8 -4.44667 TCCCTCAAGAACAAA TCAGGCCAGC ATAT GCTGGCCCCA GATTGATAACAAAGT 87 2 SFV_RS16685 3080756 .. 3080778 - -9.2 -4.12315 AAACGAAGAATTAAA CGGCATAAAA AAG TATTATGCCG TCTTAAAATAGAGGA 80 41 ansB 3079544 .. 3079564 - -14.7 -4.74103 GTCTGAAGTGAAAAA GCCCCGGCA CGA TGCCGGGAC GAGGTGATTAGTACT 100 33 SFV_RS16675 3078400 .. 3078432 - -12.9 -4.67173 TAATGTAAAAAATAA TTTGCCGGATAACTT TTT ATATTATCCGGCAAA GGCACTTAACATGAG 100 41 SFV_RS16630 3070725 .. 3070742 - -7.7 -4.15044 CGGGCGCTCAACAAA GGCAAAG TTGA CTCTGCC TCTGCGGTTATTATT 76 246 SFV_RS16585 3062971 .. 3062988 - -8.5 -4.52703 GAAACCACGAGAAAA CTCTTGT TTTT ACAAGAG CGCCCTTGTTCAGTC 87 296 SFV_RS16575 NONE SFV_RS16570 3060746 .. 3060777 - -16 -5.02777 ATATATAAAAAGAAA GCGGGCCGATTTAC GTAA ATAAATCGACCCGC CAGCGGAATAATCTT 100 43 SFV_RS16565 NONE SFV_RS16560 3059451 .. 3059483 - -14.9 -5.71712 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGCGAAAC 100 93 SFV_RS16555 3058424 .. 3058455 - -10.8 -2.52464 CGGGTGCCGAACGTA GGTCGGATAAGGCG TTCA CGCCGCATCCGACA TTAATGGCACGTTTT 74 65 SFV_RS16545 3055227 .. 3055244 - -14.1 -5.65513 TACTAAGTAAAAAAA GGGCCGC TTTC GCGGCCC TTCTCACAAAACGTC 100 48 SFV_RS16535 NONE SFV_RS16530 3051994 .. 3052022 - -8 -2.97489 GTAACGCGAAATAAT GGCCACGCCAGG GACAT CATTGCGCGGCC TCCCCGATATCAACG 61 13 SFV_RS16525 NONE SFV_RS16520 NONE SFV_RS16515 3049373 .. 3049386 - -5.2 -4.7657 GAAAAACCTGAAAAA CCGC CAGCGC GCGG CAAAGGTTGGCGTAC 78 446 gapA NONE SFV_RS16480 3044128 .. 3044145 - -12.7 -3.90922 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT 100 35 SFV_RS16475 3042820 .. 3042836 - -11.5 -5.40072 TTTTGGCGAAAAAAA GACCCGC AGA GCGGGCC TTGAGATAAGCAGAA 100 50 SFV_RS16470 3041776 .. 3041801 - -11.9 -3.31932 ATAACTAATAAGAGA GAGGCCAGAGA GTAT TATCTGGCCTC AGCGTTGATTACGCA 85 34 SFV_RS16465 NONE SFV_RS16460 3040172 .. 3040197 - -13.3 -2.64472 TATCGGGTAAAGGCA TTAGCCCGACG AATA CGTCGGGCTAC AAGTATTATTGTGCT 84 31 SFV_RS16455 3039376 .. 3039395 - -6.4 -4.11585 AGGGACGATAAATAA TGGTGGGA TTGA TCCCACAA GGTCGCATATTCGCA 68 244 SFV_RS16425 3031386 .. 3031404 - -3.2 -5.27399 CAACATATCAAAAAA TAATATTG CGG CAATATGA ACGTTTGCGTCGCGA 77 196 SFV_RS16420 3030043 .. 3030065 - -15.6 -5.66684 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA 100 47 SFV_RS16415 3029238 .. 3029252 - -4.2 -4.57073 CAGTTGGTGGAAAAA CTCCCC GTT GAAGAG TGGGATATCCCTCTT 67 252 SFV_RS16400 NONE SFV_RS16395 NONE SFV_RS16390 3024852 .. 3024864 - -3.3 -3.05597 TTTATTCCTTAAAAC CGCCT TCA ACGCG CCACCCAACCGAGGG 45 18 SFV_RS16385 3023565 .. 3023588 - -10.3 -4.39386 TTCAAATGAGGAAAA TCTCCCGGC GAAAAA ACCGGGAGA TGAAAGTGTGATGGG 87 69 gcvT 3022093 .. 3022113 - -8.9 -3.16667 CAAAAAAGTAAATCA CGCGACGGC TTT GCCGTTACG CACAAAAACAGGTTT 70 2 SFV_RS16375 3021611 .. 3021652 - -8 -3.14132 CTCTCTCCTTACGAA GAGAGTGAGGGTGAGGCA TAAATT TTCCTCACCCTGATCCTC TCCCGCAGAAGAGGA 64 50 SFV_RS16370 3018646 .. 3018659 - -9.5 -4.7373 TCATCTGACTAAAAA GGCGC CGAA GCGCC TTTAGAAAATACTCG 91 51 SFV_RS16365 3017631 .. 3017656 - -13.4 -2.79023 TAAGTCGATGAAGTA CCGGATGCAA TACTTG TTGCATCCGG TCAGACAACTTCCCT 85 44 SFV_RS16355 3015726 .. 3015737 - -4.4 -3.281 GCGTAACTGAGAATA GTTC CAGT GAAC ACCTGTTAGCTAAAA 52 119 SFV_RS16350 3014815 .. 3014857 - -9.1 -2.95073 GCTCGAAGAGTAAAT CTCTGTATCGCATCAGGCA TTTAT CGCCTGATGCGACGCTGAC GCGTCTTATCATGTC 67 176 SFV_RS16340 NONE SFV_RS16335 3012556 .. 3012568 - -4.8 -2.72144 GGATTTTGGTGAAAT CCAG GAAGA CTGG GAAGCCGTCTGGGAT 46 392 xerD 3011366 .. 3011381 - -4 -2.87132 CGTTCTTTTCAGACA TCACGCC CGC GG-GTGA TGCTGTTGATGAAGT 46 10 SFV_RS16320 NONE SFV_RS16315 3008844 .. 3008870 - -11.7 -3.30903 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG 85 47 SFV_RS16310 NONE lysS 3006138 .. 3006155 - -10.5 -5.64421 AGCTTAAATAAAAAA CCCCGAC ATTT GCCGGGG TTGTGAGCATAACGT 100 46 SFV_RS16245 NONE SFV_RS16240 2996822 .. 2996832 - -5.4 -4.22535 ACAACTTGAAAATAA GGTA TTT TACC TGGGTTGTTACAAAA 67 183 SFV_RS16235 2995882 .. 2995911 - -3.6 -3.01712 TGTGGCGGCGTAAGA GGCCC-CG-GAACG TTAT CGTTCACACGGACC GTGGAGGCCAGTACT 46 320 SFV_RS16215 2991561 .. 2991575 - -5.8 -4.8622 GTTTTCAATTAAAAA TAAAAC AAT GTTTTA TTTTTAATTTAAGGA 76 185 SFV_RS16210 NONE SFV_RS16205 2989781 .. 2989798 - -12.7 -5.4492 TAGAGATATAAAAAA CCCTGCC ATGC GGCAGGG TCATAAAAGTAAGAG 100 48 SFV_RS16200 2988057 .. 2988083 - -18.8 -5.30155 CTATTAACGAAAAAA GGGCCGGATGTA CAG CACATCCGGCCC GTGAAATCAGATGCC 100 32 SFV_RS16195 2987018 .. 2987046 - -3.7 -2.93869 CATGATCGTAGAAAC CCACAGCGCCG CGTCAGT CTGCGCAATGG TACGGGCGGGGGTAG 45 248 SFV_RS16185 2984949 .. 2984960 - -3.6 -2.76263 GTCATCATGCAACCA GCGA CTAA CCGC AGTTAAAGCAATTCC 43 28 SFV_RS16175 NONE SFV_RS16170 2979968 .. 2979993 - -16.3 -3.57406 CCTGCACCATAAAGA TTAACGCCGGT TAAA ACCGGCGTTAA ATATTAATGACGGCG 100 29 SFV_RS16135 NONE SFV_RS16130 2973415 .. 2973425 - -6.8 -3.68506 GAACAGCGATTGAAA TGCG CGC CGCA GGTTTCAGGCGCTCC 64 115 SFV_RS16125 NONE SFV_RS16120 2971647 .. 2971666 - -10.7 -5.44119 CGGAGGGTAAAAAAA CCGACGC ACACTG GCGTCGG CTCTGGCAGGATGTT 100 47 SFV_RS16115 NONE SFV_RS16110 NONE SFV_RS16105 NONE SFV_RS16100 NONE recC 2966322 .. 2966340 - -7.4 -2.69471 CTATGTTTATATAAC CATCAGTC CGT GACTGGTG CGCATCATAAAGTAA 58 72 SFV_RS16090 NONE recB NONE recD 2957911 .. 2957955 - -7.2 -4.30978 GGTAAGCGATGAAAA TCACCGGATGCG--GCAGGCGT AAC ACTCGTGCGTCGCATCCGGCAA TTACGTTTATTCCCG 77 32 amiC 2955063 .. 2955076 - -5.9 -5.60993 TCTCCCATAAAAAAA GCGCC ATTC AGCGC CTTTTTATCATCCCC 93 33 mltA 2953298 .. 2953318 - -10.4 -4.93365 CCTCAGAATTAAAAA GGGCGAGG TTATC CCTCACCC TAAACGCATAAATGC 93 224 SFV_RS16050 2952430 .. 2952467 - -17.1 -3.59946 GGTTTAAGCACAGAA CCGGGTCGGATAAGACG TTCG CGTCTCATCCGACCTGA TTGTTTAACCCTGAC 100 30 SFV_RS16035 2950310 .. 2950329 - -10.7 -2.57423 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC 74 50 SFV_RS16030 NONE SFV_RS16025 NONE SFV_RS16020 2947483 .. 2947504 - -2.9 -3.09635 ATCTGGATGAGGTAA CGCACATTA TTTC TGATGAGCG CCAGGTTGCAACTTC 43 100 SFV_RS15985 NONE SFV_RS15980 2939057 .. 2939068 - -2.2 -4.74801 GAATCGGACCAAAAA GC-GC CAC GCAGC TGCTGGTCGAGTTTC 68 257 SFV_RS15955 NONE SFV_RS15950 2933061 .. 2933076 - -11.8 -5.4505 GCTGTCAACAAAAAA CGCGCC CGAA GGCGCG TTGGCGATACACTCA 100 51 pheA 2931657 .. 2931684 - -18.6 -2.67428 GCCAGTAATAATCCA GTGCCGGATGAT TCAC ATCATCCGGCAC CTTTTCATCAGGTTG 100 33 SFV_RS15930 NONE SFV_RS15925 NONE SFV_RS15920 NONE SFV_RS15915 2926445 .. 2926466 - -7.1 -3.62224 ACATCCTGTTAAGAA GGGCTGGCC AATT GGCTGGCCC TTTTTTTGTCTGTTT 67 50 SFV_RS15885 2921881 .. 2921898 - -2.7 -3.64192 AAAAATAGGCTGAAA TGACCAC CATG ATGATCA GAATAATGATCAACG 50 83 SFV_RS15880 2920617 .. 2920642 - -19.1 -2.6563 TTTCGTAATAATTCA CGGCCCTGCAT GCGA ATGCAGGGCCG TTTTCGTTACTCCGC 100 32 ppnK 2918941 .. 2918960 - -2.2 -2.56601 TGTATGAAAAACCAT TACTGT TATTGTGT ACAGTA TAAACTGGTTTTATA 39 65 SFV_RS15865 NONE SFV_RS15860 2916715 .. 2916731 - -12.3 -5.46276 AACAGACAGAAAAAA GGTGCTC ATT GAGCACC TTTTTTAACGTCTTT 100 57 smpB 2915127 .. 2915138 - -4.4 -3.60792 GCCCCAATGTGTAAA GGTA AGTA TACC AGATTTATGAGCGCC 55 218 SFV_RS15840 2913243 .. 2913253 - -2.4 -3.61517 AGCTGCGCCTAATAA CGCG ACA CCCG CCGTTTACTGTCTGG 49 98 SFV_RS15835 NONE SFV_RS15830 NONE SFV_RS15825 2911093 .. 2911114 - -11.6 -5.03715 AGTACCTGGAAAAAA TGCCCGCT ATGCCA AGCGGGCA AATTGATCCTACCCA 100 59 SFV_RS15810 2907976 .. 2908003 - -15.7 -2.62386 GTAAACTAAACATAT TATCTGCCCCG TTTTAT CGGGGCAGATA TAACATTAAATTATA 93 36 SFV_RS15805 NONE SFV_RS15800 NONE gabD NONE SFV_RS15790 2902614 .. 2902626 - -9.1 -3.30124 TCGTAGGCCGGACAA GACGC GCA GCGTC GCCTCCTGCATGGGG 71 47 SFV_RS15785 NONE SFV_RS15780 2900277 .. 2900299 - -10.6 -4.63184 AACCGATGCTAAAAA GCCCGGATAA AAT TTATCCGGGG CAAGTGTTGCGTATT 100 53 SFV_RS15765 2899139 .. 2899149 - -3.2 -3.54935 GAAATGGTTGTCAAA GCCA TAG TGAC TCCTTACGGACAATA 50 29 SFV_RS15760 2898435 .. 2898452 - -6.2 -5.00616 CGTGCTGGTAAAAAA CGCCAG CCGCGT CCGGCG AAATATAAATTCACT 83 192 SFV_RS15750 2897016 .. 2897038 - -19.2 -3.42283 GAAGCCAGTTAAAGA CGCGACTGGC GAT GCCAGTCGCG AAAAGAAGAGTCAGG 100 36 SFV_RS15740 2896135 .. 2896155 - -12.6 -4.89063 CCAGGCAAAAAGAAA CCCCGAAG ACAGG CTTCGGGG TCAAAGACGCGTATT 100 57 SFV_RS15735 NONE nrdI NONE SFV_RS15725 NONE SFV_RS15720 2892061 .. 2892085 - -7.2 -5.14477 TAGATAGCGAAAAAA CGCCTGAA TATTGTAGT TTCAGGCG AATAATGCAACAGAG 86 140 SFV_RS15715 NONE SFV_RS15710 2889558 .. 2889576 - -12.4 -3.31144 TTGGCAGGGTGATAA TGCCCGGC GTC ACCGGGCA AGTGCAGAGTTACTT 90 35 proX 2888494 .. 2888526 - -14.2 -2.87132 GGCGTTGTGTACAGA GCGGCGGATGAGGCG AAAA CGCCTTATCCGCC-C GAATAAAAATTACTT 89 35 SFV_RS15700 NONE SFV_RS15695 NONE SFV_RS15690 NONE SFV_RS15685 NONE SFV_RS15680 2885287 .. 2885310 - -12.5 -4.56597 CCTGCTTGCCAAAAA GGCCAGCAT GTTGCG ATGCTGGCC GGTCATTTTTTCTTT 100 73 SFV_RS15675 NONE emrB 2882474 .. 2882493 - -12.2 -5.1848 AATTAATTGAAAAAA GCCAGTTC AAAT GAACTGGC TTAGTTGTACTTAGT 100 36 SFV_RS15615 2875026 .. 2875036 - -4 -3.09327 CTATCTGATGGAAGA TATC CAG GATA TTTGGCGAAATTTTG 47 89 srlA NONE srlE NONE SFV_RS15580 NONE SFV_RS15575 2868517 .. 2868534 - -5.5 -3.27475 CTGTTGATCAGAACA TCACCTG ACCG CCGGTGA CATTGATCGACTGTC 54 0 SFV_RS15570 NONE srlR NONE SFV_RS15560 2866198 .. 2866235 - -4.9 -3.57561 CGCGAATGCTGGAAA CTGACG-T-CGCCAACC TGCATC GGCTGGCGAAACGTCTG GGATTGAAGGATTAA 57 37 SFV_RS15550 NONE SFV_RS15545 2861895 .. 2861938 - -9.7 -2.72144 GGATGCGGCGTAAAT GCCTTATCCGGCCTACA CATGCGTCCC CGTAGGTCGGATAAGAC GCGCCAGCGTCGCAT 69 67 SFV_RS15525 NONE SFV_RS15520 2854296 .. 2854306 - -8.2 -3.88787 GCAGAGTTCGACAAA GCCG TTG CGGC AATGCCTGTTGGCGT 74 330 SFV_RS15460 2845332 .. 2845346 - -2.7 -4.19624 GATGGCGAAGACAAA CAGCG GATTG CGCAG GCGCAACTGAGCATT 60 121 hypA NONE SFV_RS15445 NONE SFV_RS15440 NONE SFV_RS15435 NONE SFV_RS15430 2841180 .. 2841196 - -13.7 -3.72576 TGTTCTTCCAGGAAA GCACCGC AAA GCGGTGC AAAAGGTCATTGACT 100 65 SFV_RS15425 2839050 .. 2839075 - -14.8 -2.73994 ACCTCGTGAATAGTA TGCCGGACAG GCAGAT CTGTCCGGCA ATTTGCAGTTAAATC 89 34 SFV_RS15410 2835813 .. 2835839 - -11.7 -3.01924 CAGTTGTCGTTAATA TTCCCGATAGC AAAAG ACTATCGGGAA TTGTTATTACACCAG 81 32 SFV_RS15405 2834846 .. 2834872 - -4.2 -3.58536 AAAGTCACGGTGAAA CGGGCGATTGCC AGT GCCAGCCGCCAG CGAGTTTTGGTCTGT 53 241 SFV_RS15395 NONE SFV_RS15390 NONE SFV_RS15385 2832097 .. 2832116 - -5.7 -3.16191 TGATATGGCCATGAA TGGCGTCG GATGT CG-CGCCA GTGCACGCATTATGG 52 512 SFV_RS15375 2830821 .. 2830840 - -10 -5.7946 GCCTGAATAAAAAAA CAGTCCGC GGGA ACGGACTG TTAAATAAAGGAAAC 100 136 SFV_RS15360 2827483 .. 2827493 - -3.2 -3.74693 TCTTATCGCAGCAAA CCGA TTT TCGA ATCACTCTATCTCGG 53 341 SFV_RS15345 2825341 .. 2825364 - -12.4 -3.87075 AGCATCTGTCAGAAA GGCCAGTCTC AAGC GAGGCTGGCC TTTTTCTTTTGTTTG 100 103 SFV_RS15280 2814053 .. 2814064 - -5.8 -3.61398 TTGGCCTGCCAACAA TGGC AACG GCCA ATGCCATGTACGATC 60 224 SFV_RS15250 NONE SFV_RS15245 NONE SFV_RS15240 2805629 .. 2805663 - -10.1 -5.24129 TGCGTTGACAAAAAA TTAGCGCAAGAGGAC AAAAA ATCACCTTGCGCTAA TGCTCTGTATCAGGT 100 178 SFV_RS15230 2803492 .. 2803503 - -5.8 -4.2074 GGCTGAACAGAGAAA CGGA TGAA TCCG GGGAGGCCCGGGGGC 70 91 SFV_RS15095 NONE SFV_RS15090 2779034 .. 2779048 - -4.2 -4.24745 GATTATGAAGAGAAA CTGAGG TAG CCTGAG TGTAACGGACACTCC 62 237 SFV_RS15060 NONE SFV_RS15055 2775955 .. 2775967 - -6.9 -3.72893 TATGTCCGCAGTAAA CCGCG CAT CGCAG CGCGTAACAATCCCG 66 367 SFV_RS14960 2766904 .. 2766915 - -4.4 -3.53761 CAATGGTGCGGCAAA TGGT TAAA ACCA GAACAATGGAAGGTT 53 447 SFV_RS14935 NONE SFV_RS14930 NONE SFV_RS14925 2761038 .. 2761058 - -3.4 -4.21908 CATTATCAGTCAAAA TAAAATCA TTATT TGATTTCA ATTTTGTCCCACTCC 60 13 SFV_RS14920 2760282 .. 2760296 - -7.1 -3.30124 CTGTAGGCCTGATAA GACGC GTTAA GCGTC GCATCAGGCGCTGAA 63 101 SFV_RS14895 2755902 .. 2755913 - -4.4 -3.66256 CATACGCGTAAAACA GTCA GCGC TGAC GTGATTTAGCACCGA 55 107 SFV_RS14890 2755339 .. 2755354 - -2.4 -3.6187 AGCCAACGAAATCAA GCATCC AGTG GGGCGC GTACGCGATATTGAA 49 244 SFV_RS14880 NONE SFV_RS14875 2753663 .. 2753682 - -13.6 -3.33162 TATCTGATTTGATAA TGCCAGCC TTCG GGCTGGCA TTTTTTATGGTGGAG 100 41 SFV_RS14845 2742885 .. 2742916 - -10.9 -4.67943 CGTTAAGACAGAAAA CCAAAACCGGCTC TATCTG GAGCCGGTTTGAG ACTGATGCTAAACGC 95 216 queF 2734687 .. 2734713 - -3 -2.5805 ATGACCTTTCACAAC CTTCTGCGTG AATCCAG CACGCAAAAT TGAGAAAAAATTTAT 40 37 SFV_RS14795 2733152 .. 2733183 - -13.9 -4.4017 CCAATGTGCATAAAA GAATCCGGAAACA AGTGAG CGTTTCCGGATTC TTACACAGCCACTGG 100 91 SFV_RS14790 2731791 .. 2731808 - -3.3 -4.56607 CCAGTAATGATAAAA CGAGCCC TTCG GGGCTAA TGCCAGTCAGTTAAG 64 36 SFV_RS14770 2726432 .. 2726457 - -16.3 -3.90762 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACAGCTCAAGGG 100 67 SFV_RS14755 NONE SFV_RS14750 2722830 .. 2722865 - -7 -4.00532 TTTTTAAAGAGCAAA TATCTCAAACATCACC CGAA GATGAGTTTTGAGATA TCAAGGCAGGTGACT 68 61 SFV_RS14745 NONE SFV_RS14740 2719557 .. 2719576 - -13.6 -4.74103 GCGCCAATGCAAAAA GGCCATCC TGAC GGATGGCC TTTCGCTTAGTTTGA 100 42 SFV_RS14735 2717610 .. 2717626 - -9.4 -3.51032 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG 75 368 SFV_RS14705 NONE SFV_RS14700 2710978 .. 2711005 - -13.4 -3.5394 AAATTTGCGGGGAAA TGCCGGATGGCA GAGT TGCCACCCGGCT GATTTATCAGGCTTT 100 32 SFV_RS14690 2709541 .. 2709564 - -16.8 -5.65513 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC 100 48 SFV_RS14680 2707738 .. 2707752 - -5.6 -4.09864 AGTTACGCCCGAAAA CGCGTG CGC CAAGCG AGAAGCAGACCGGCA 65 233 SFV_RS14670 2705531 .. 2705557 - -6.6 -3.62775 ACCATGCTCCAACAA GAAATAGACGAA TAT TACGCCCATTTC CGCGTCTCAAATAAT 63 190 SFV_RS14660 NONE SFV_RS14655 NONE SFV_RS14650 NONE rseB NONE SFV_RS14640 2701007 .. 2701024 - -11.3 -4.32607 GCAAAATGCAACAAA GCCAGTG AAAT CACTGGC TCGCGTCTTCCGAAG 93 18 SFV_RS14635 2698984 .. 2699005 - -5.1 -2.68015 GGCAATCACCAGAAT CAGGGCAAA CATA TTCGCCATG CCAACTCCTAAGGGT 48 40 SFV_RS14630 2697985 .. 2698017 - -21.5 -4.07877 TTATCTCATAAATAA TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA CGAAGATGGCTATTA 100 38 rnc NONE SFV_RS14620 NONE recO NONE SFV_RS14610 2694681 .. 2694696 - -2.6 -2.71924 TATCCGTGCCTAAAC CTAATA TTGC CATTAG CCACGCGCTTCCAGC 41 22 acpS 2694253 .. 2694289 - -11.6 -4.83759 AATTAAAGTTAAAAA GTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTAC TTTTTAAAGAGAACG 100 49 SFV_RS14595 NONE SFV_RS14590 2693764 .. 2693793 - -10 -3.78022 TTTATAGTTATTAAA GGCGCGTCCAAT TGGTTC ACCGGACGCACC TTAAGTACGTTTCCT 80 45 SFV_RS14585 NONE SFV_RS14580 2692838 .. 2692870 - -4.3 -4.3898 ACCACGCGGATAAAA TTTAATATTCTACTC TGG AAGTAGAGTATTAAT TATATTACTGGGAAG 66 60 SFV_RS14570 2691097 .. 2691116 - -4.2 -3.62046 CTATCGTTTTAATAA CCGGGATG AAGC CATCTCAG TAATACGGGAATACA 53 179 SFV_RS14555 NONE SFV_RS14550 NONE SFV_RS14545 2687697 .. 2687709 - -4.1 -3.44051 GTTCGAGCATTATAA CGAAT GGC ATCCG CATAGTGCGCTGGGT 52 40 SFV_RS14540 2686856 .. 2686868 - -4.1 -3.70007 ACGATGGAAAATGAA CTCCT CAA AGAAG CCGTTGAATATGGAC 53 96 SFV_RS14530 NONE SFV_RS14525 2685441 .. 2685459 - -3.1 -4.13995 TCGCGATAAATTAAA TCAGGAA GAAAT TTCCGGA GAAGCGGGCCATTCA 57 7 SFV_RS14520 NONE SFV_RS14515 NONE SFV_RS14510 2683056 .. 2683078 - -6.2 -3.84825 GGGAGTGACAGCAAA TGACCTCCGC ACT GCCGAAGCCA TGGTCAGAAGCCGTG 63 343 SFV_RS14500 2680041 .. 2680073 - -7.7 -3.94877 ATTGCCGAAGAACAA GCGACAAACAGTGCT TCA ATCTCTGCTTGTCAC GCTCAGGGAATGTTA 72 475 SFV_RS14490 NONE SFV_RS14485 2677532 .. 2677548 - -5.1 -3.28712 CCTCGCTGCGTACAA TATGGGC TAT GCGCATA TGCTGGATGCCCGCG 54 408 SFV_RS14475 2672136 .. 2672153 - -8.4 -5.4492 TACAGACACAAAAAA GCTCCC GGAGTT GGGAGC TTATGATAGTGGTTG 100 104 SFV_RS14470 2670203 .. 2670217 - -2.8 -5.01553 AACTGACAAATAAAA TAGCCT GAT AGGATA GGCTGTTAGCATTAT 70 37 SFV_RS14465 NONE SFV_RS14460 NONE SFV_RS14455 2667544 .. 2667558 - -5 -4.3534 CGTGAAGCAGGAAAA CATTCA TTA CGAATG CTTTGGCCCGCATAA 67 95 SFV_RS14445 2664635 .. 2664652 - -11.3 -4.00066 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTGATGATCATAAAC 91 186 SFV_RS14435 2660005 .. 2660018 - -2.5 -3.53012 CGCGTGCCGCTCAAA TATTA CAGT TAATA GGGTTTAGTGAACGT 48 30 SFV_RS14430 NONE SFV_RS14425 NONE SFV_RS14420 2656347 .. 2656382 - -3.8 -3.30452 TAACAATACGATTAA TTTTCATCCCTGCCGC ACCC GCGCCAGGGGCGTTAA GGTTTAGCGTTTCGC 50 29 SFV_RS14415 NONE SFV_RS14410 2654334 .. 2654365 - -14.4 -3.44848 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCA TTTTATAAATTACAG 100 35 SFV_RS14375 2648498 .. 2648509 - -2.2 -5.22794 ACAAGCACTAAAAAA CTGCG ATC CGC-G ACGCATGTTGCAAAA 74 52 SFV_RS14370 2647229 .. 2647242 - -2.4 -4.13282 AGCAGATCCGCAAAA TGCT CGAATC AGCA TGAGGGAACAACTTT 55 20 SFV_RS14350 2643081 .. 2643095 - -7.1 -3.30124 TTGTAGGCCTGATAA GACGC GTTAA GCGTC GCATCAGGCAACCAC 63 43 SFV_RS14345 2642256 .. 2642279 - -2.4 -2.91593 CATTGCTCTATAAAC TCCGTACATC ACTC AATGCAAGGA ATCAGGCTACCGGCT 41 101 SFV_RS14340 NONE SFV_RS14335 NONE iscA 2640233 .. 2640259 - -8.7 -4.6951 ATCAGGTAAAACAAA CCCCACGCGCAG GCGA CCACG-GTGGGG TTATCGGTATGCGCA 89 41 hscB 2639643 .. 2639654 - -2.2 -2.78867 CTAATTTGTAATAAG GCCA TGTT TAGC TTCCAGAAATTAAAA 40 35 hscA NONE SFV_RS14315 NONE SFV_RS14310 2637221 .. 2637242 - -7.9 -4.4261 CGTTTAACAGCAAAA CGGACTCCC CCCA GGCAGCCCG TTCATTCACTCGGCT 79 31 SFV_RS14305 2635801 .. 2635825 - -8.5 -2.71712 GTTCGGGGCGCAAAT GCCTGATGCGC TAC GCTTATCAGGC CTACAAGGGATTCGC 64 106 SFV_RS14300 2634517 .. 2634533 - -6.5 -6.04324 TTAAAAAACAAAAAA CCGCC AAAATCA GGCGG TTATTTGTTGCTGGT 100 480 SFV_RS14290 2632258 .. 2632283 - -4.1 -2.72379 TTAAGTTGTCAAGCA TGTTATGACCCC TGC GGGGT-ATAAAA AGTCCCGTCGCGCAT 45 2 SFV_RS14285 2630173 .. 2630186 - -2.5 -4.08394 ACATTTTTTTTAAAA TAAAA TGAG TTTTA GCAACAATCAGGGAC 56 49 SFV_RS14280 2629537 .. 2629568 - -8.7 -5.04249 GGTTGAAAAAAGAAA CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG CTGCATTGTACAAAT 91 86 SFV_RS14275 2628285 .. 2628318 - -14.8 -3.82117 TTCATTCATAAAAGA TTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAA TGGCTATCAGACCGC 100 32 SFV_RS14270 NONE SFV_RS14265 2625852 .. 2625872 - -13.3 -3.00298 GGGTTCAATCATACA CGGGAAGCG AGG CGCTTCCCA TCACGTTATTATTTT 86 26 hisS NONE SFV_RS14255 NONE SFV_RS14250 2622618 .. 2622649 - -13.8 -3.90048 TCGTTGTTAAAAACA GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA AAGTGAACGACAGAG 100 45 SFV_RS14245 NONE SFV_RS14240 2620720 .. 2620732 - -7.7 -2.9296 GAAATGCTAACCACA CGTCT GGA AGACG GCTGGATAGAAAGTG 58 87 SFV_RS14230 2617770 .. 2617792 - -11.3 -4.33674 AACAGATAATATAAA TCGCCCGAC ATGAA ATCGGGCGA AGAGAATCAGGAGCC 93 32 guaA 2616103 .. 2616122 - -7.8 -5.47159 CTTGAAGATAAAAAA CCCTCTGT AGTA ACGGAGGG TTTTGTTCATTCATA 100 56 SFV_RS14205 2614144 .. 2614162 - -3.1 -3.41229 AGATGCTCAGCAGAA TCCCCCA CATCC TGAAGGA GGTGTATTCAGACAG 48 173 SFV_RS14200 2612821 .. 2612840 - -4.2 -3.62046 CTATCGTTTTAATAA CCGGGATG AAGC CATCTCAG TAATACGGGAATACA 53 174 SFV_RS14185 2610289 .. 2610307 - -3.7 -3.25088 CCGTAAAGCGATTAA GCTCGAC GATCT GCCGCGC TTTACCTTGTTTAAG 47 337 upp 2604134 .. 2604152 - -11 -5.81412 TTTACTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTAATTATTTTTAT 100 44 SFV_RS14155 2602752 .. 2602802 - -2.4 -2.72649 AGTTTACCACAGAAT CCCATGATGTTTGAACCGGGCAGC AAC ACTGCCCGGTCGGTACATTATTTG TCTGTTATATCCGCG 40 19 SFV_RS14150 2601585 .. 2601597 - -2.6 -4.86731 CCTGCTGAAAGAAAA CGGC GTGGA GCCA GAAGTGGTGCTCTAC 68 428 SFV_RS14135 2598717 .. 2598746 - -16.5 -4.62872 AGGAATCCTGAAAAA TCAGCCCGGCGAA ACAG TTCGTCGGGCTGA AGATTATTCTTGCGC 100 29 SFV_RS14050 NONE SFV_RS14045 2581676 .. 2581695 - -11.4 -5.34555 TCATATCAGAAAAAA GGGCCGGA TGAT TCCAGCCC TGTATTTTTACTTGC 100 33 SFV_RS14035 2580765 .. 2580784 - -2.8 -2.75074 TGCACGGCAAGATGA TGAACAGA AAAA TCAGTCCA GCTGTACACCCAGGC 41 18 SFV_RS14030 2579751 .. 2579767 - -2.3 -4.05788 GCCCCGGAAATTAAA TGCTTTT ACC AAAAGTA TTGCATTGTGCCGGA 55 4 SFV_RS14025 2577631 .. 2577645 - -4.2 -2.71055 TTGAACAACAAAATG GTCATG TTT CATGGC GAACTCCTTAACTGA 45 96 SFV_RS14020 2576864 .. 2576916 - -10.6 -2.57931 CGTAGGCCGGATAAG GCGTTAACGCCGCATCCGGCAATGG TGAA CGATC-CCTGATGCGACGCTCACGC GTCTTATCAGGCCAG 74 53 SFV_RS13985 NONE SFV_RS13980 NONE SFV_RS13975 2565123 .. 2565157 - -6.5 -2.87564 CCACCGGTTCAGAGA TGGTAATTACCCTGC AAGCG GCAGAGAAATTAGCA GGAGAAGGTCGCAAT 52 419 SFV_RS13960 2559861 .. 2559890 - -15.1 -4.27617 TATATTTCAGGAAAA CCGCTTACCCTGA ATAT TCAGGGTAAGCGT GAGAGTTAAGAATGA 100 42 SFV_RS13955 NONE SFV_RS13950 NONE eutA 2557422 .. 2557443 - -2.9 -2.87404 ACACCAAGCACCATA CCTGATAAC TACC GTATTCAGG AAGGAAATGCGAGTG 42 21 SFV_RS13935 NONE SFV_RS24520 NONE SFV_RS13915 2555280 .. 2555296 - -3 -3.01905 AGCTCGCAGATAAAC GCCACAT CAGC ATG-GGC AACAGGCGAAGAAGT 43 40 SFV_RS13910 NONE SFV_RS13905 2554821 .. 2554833 - -7.7 -4.14511 AACTGCACCCCAAAA GTTGG ACA CCAAC TGAGTAAGGTGCATT 74 81 SFV_RS13840 NONE SFV_RS13835 NONE SFV_RS13830 2543526 .. 2543546 - -6.7 -3.67792 GTAGAGCGACGTAAA GCGATGGCC TAC GGCGAGCGC GAGCGCAATTTTCAG 63 247 SFV_RS13815 NONE SFV_RS13810 NONE SFV_RS13805 2540205 .. 2540223 - -10.3 -4.20868 TCCTGAAAATAAGAA TGCCACG CAATC CGTGGCA TTGTTGAGCGCTATT 85 81 SFV_RS13800 2539233 .. 2539260 - -14.2 -5.16071 AAGCAGTAATAAAAA GGCCAGTCAGTA ATGT TACTGCCTGGCC TTTAATCAATGAATC 100 49 SFV_RS13785 2535654 .. 2535666 - -5.5 -3.06696 CTCCTTGTTAATACA GAGCG TTA CACTC CATTCCCTCTGAAAA 52 117 SFV_RS13780 2534802 .. 2534825 - -11 -3.93038 TAGTTCAAGACGAAA TCCTCCCCAC ACAT GCAGGGAGGA AACAGAGGTGAATCA 86 38 SFV_RS13775 NONE SFV_RS13770 NONE cysW NONE SFV_RS13760 2530674 .. 2530701 - -9.1 -4.72272 CCTTGCCATTAAAAA GCCCGGA-TCGC GGGAA GCGCCTCCGGGC GTTTAACATTCACTC 90 47 cysM 2529478 .. 2529514 - -15.4 -5.1166 CACGAAAATTAAAAA CTGCATTTGTCGGCAGC AACA ACTGCCGACAAAT-CAG ATTATTGACAAAGTG 100 189 pdxK 2527366 .. 2527383 - -12.7 -4.65895 TGCCGCAGTGAAAAA TGGCGCC CATC GGCGCCA TTTTTTATGCTTCCG 100 30 SFV_RS13710 2521202 .. 2521218 - -10.8 -4.67904 CATCAATGCTAAAAA CCCCCG ACAAG CGGGGG TTCGAAGAGGAGTTA 95 57 ligA NONE SFV_RS13700 2518908 .. 2518941 - -3 -3.12505 ACGCCAGACCGAACA GTTACAGGCGCAGC AGGAAA GCAGCGCCGATAAA GCTTAAAGCGGACGC 43 28 SFV_RS13690 2516483 .. 2516515 - -15.7 -3.19463 TGCACGACCCACCAA TGCAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCGATTTGTAA 100 443 gltX 2514334 .. 2514356 - -12 -5.73978 AGCATAAATAAAAAA CGGCAGGATA TTA TCTCCTGCCG TTTATCTTTTTACAC 100 46 SFV_RS13650 2513241 .. 2513260 - -11.4 -5.43414 AGCAGAGACAAAAAA CCCCCGCT TTGC AGCGAGGG TTGGAAATTTGGTGG 100 35 SFV_RS13645 2510826 .. 2510873 - -17.2 -4.07687 ACTGGTGCTGTAAAA TCATACATAAAAAAGCCGGGGA TCAT TCCCCGGCTTTTTTACGCCTGT TAATCAGCTAATGGC 100 25 SFV_RS13635 2507931 .. 2507962 - -13 -2.6627 CCAATGGAGCACAAT GCCTGATGCGACGC TAGC GCGTCTTATCAGGC CTACAAACCGGCTCT 84 110 glk 2505003 .. 2505026 - -11.8 -2.81922 TATGATTTAAAAGAT TATCGGGAGA GTTA CCTCCCGATA TAACAGGAAGGATTT 79 39 SFV_RS13610 NONE SFV_RS13605 NONE SFV_RS13600 NONE SFV_RS13595 2501066 .. 2501081 - -3.3 -3.0644 ATTGAATCGTTAACA TAACC GCTCCG GGTTA ATCAGGAGATCATCT 45 35 SFV_RS13590 2498239 .. 2498249 - -4.6 -3.41878 CCGGGTAATTCACAA CCGC GCG GCGA TTTTCTCTATCACAG 51 347 SFV_RS13570 2493806 .. 2493825 - -13.6 -4.8622 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGACG 100 48 SFV_RS13560 NONE SFV_RS13555 2491611 .. 2491621 - -5.4 -5.15381 AAGAGACTGAAAAAA CATC AGC GATG ACGACCACACACTCT 83 154 SFV_RS13545 2490479 .. 2490515 - -11.9 -3.92542 GCGAGCGCCAAATAA TTTTATGACCACAAC CTGTCGT ATTGTGGTCATAAAA AATTGTCGGCTGGAG 93 80 SFV_RS13540 2488782 .. 2488800 - -4.4 -2.94161 GAAATTTTTATAAAT TGGGAGCC AGA AGCCCCCG TTAATATCAGATGGC 48 32 SFV_RS13535 2487007 .. 2487047 - -3.1 -3.30441 TAGTATTTCCGATAA GGGTCCCCTCACCATCGCA TAA TGAGTTGGCAAGAGGAGAC GATGTCAGTATTTAA 48 37 SFV_RS13530 2485992 .. 2486016 - -6.5 -5.0133 TATGCCTTGAAAAAA GCCGAAG-GT GAAAAG ACACTTCGGC ATTTATGTAAAATCA 81 54 SFV_RS13525 2484658 .. 2484672 - -6.4 -4.09519 ATCAGTTAGAAATAA CACCTG CTT CAGATG ACAGTAAGCCTGAAA 68 179 SFV_RS13510 NONE emrB 2477103 .. 2477117 - -2.8 -3.76224 CCCTTAGCGATCAAA CCATGT ATG ACATGC TTGGCTGGCTGGCGC 53 348 SFV_RS13490 2474160 .. 2474174 - -2.9 -2.83344 ATCAGCAATAAATAT GTTTT GCAGG AAAAC GCGCAAGCAGTTGAG 41 393 SFV_RS13480 NONE SFV_RS13475 2470512 .. 2470522 - -4.6 -2.62265 ATTTAGAGATAAGAG CGAC TTC GCCG TTTACTTCTCACTAT 46 37 SFV_RS13470 NONE SFV_RS13465 2468590 .. 2468612 - -10 -4.60487 CATGACGGGTAAAAA GTGGATAAAA TAA TTTTACCCAC CGGATTTTTACCCAT 91 508 SFV_RS13445 2466300 .. 2466319 - -7.9 -5.68489 GATAACAACAAAAAA GGTGAGT TTTGCG ACTCACC TTTTTTATTTGTTTC 100 41 SFV_RS13430 2462689 .. 2462715 - -20.2 -5.3689 AGAAAGAAAAGAAAA CGCCCCTGCCAG CAA CTGACAGGGGCG TACGTACCCGAGAGG 100 43 fadI NONE fadJ 2458892 .. 2458902 - -5.4 -2.72028 CGCATGATAAAAACT TGCA TAT TGCA CCGCTTTTGTTAACC 50 222 SFV_RS13415 2458367 .. 2458399 - -14.4 -3.27298 CTGCCTAATGAGCAA TTATGCCCAATGAA TCTAC CTCATTGGGCATAA TTTGGAACACATCAG 95 37 SFV_RS13410 2457131 .. 2457158 - -12 -3.80569 CAAAATACATTTAAA TCCCCCATAGCA GTGT CGCTATGGGGGT ATGCCTTACAGGTAA 93 31 SFV_RS13405 NONE SFV_RS13400 NONE SFV_RS13395 2453160 .. 2453171 - -5.8 -2.53263 TTCATTGGTAATCCA CCAC AATT GTGG CACTGGCGTTAAATT 49 0 SFV_RS13390 NONE SFV_RS13385 NONE SFV_RS13380 2450884 .. 2450894 - -2.4 -4.1822 TTTGAGGCGAAGAAA CTGC GCC GCGG CGATTATTCACCGGA 58 412 SFV_RS13370 NONE SFV_RS13365 NONE mepA NONE SFV_RS13355 NONE SFV_RS13350 NONE SFV_RS13345 2445865 .. 2445879 - -7.1 -3.30124 GTGTAGGCCTGATAA GACGC GATAA GCGTC GCATCAGGCATGGTG 63 57 SFV_RS13335 2442297 .. 2442314 - -11.3 -4.64598 CAATGATGTGAAAAA GGGAACC ATCA GGTTCCC TTTTGCGTTAGTGCC 100 95 SFV_RS13330 2440494 .. 2440505 - -4.4 -2.83522 AGCTGGTGACCAAAC TTGC GGCG GCAA CGGGGGAACCCAGCA 46 471 SFV_RS13320 2438684 .. 2438711 - -4.1 -4.04579 TCCAGAAATAGCAAA GCTCCCTGCCA ATGTTA CAGCAGAGAAC ATGAAGAAGAGATTA 59 38 SFV_RS13315 2437648 .. 2437665 - -4.1 -2.62184 GCTGGTCGGACATTA GTACAGA TACT CCTGCAC CAGTTTCTCGGCGAT 44 5 truA NONE SFV_RS13305 2436067 .. 2436079 - -3.3 -5.24531 ACTTTGGATAAAAAA GTGGT CGA ACCGC GGAGTTACTTTTTAT 77 37 SFV_RS13300 2434988 .. 2435010 - -17 -4.46656 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG 100 36 SFV_RS13295 NONE SFV_RS13290 2432875 .. 2432900 - -9.8 -5.1356 GCGCATCAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCGACTTTTTATGCC 93 156 SFV_RS13285 2432283 .. 2432299 - -2.9 -2.64243 CCACATCTCAGAGCA CTTACGC TCT GGGCAAG AAACTTGACGAGCTT 40 10 SFV_RS13280 2430699 .. 2430717 - -12.4 -2.53263 GGGAGTTGCAAGTCA GGGTGCCA GAC CGGCACCC TCAGCGAAGGCATCA 81 38 SFV_RS13275 2430038 .. 2430056 - -13.2 -4.07687 ATCGCGGTTGCAAAA TTGCCCTG AAA CAGGGCAA CAGCGGAGTTATGCG 100 34 SFV_RS13270 NONE SFV_RS13265 NONE SFV_RS13260 2427530 .. 2427540 - -4 -4.3739 TATCGTGCCATAAAA TTGA CCA TCAA GGCAAAATATCCCGC 64 166 SFV_RS13255 NONE SFV_RS13250 NONE SFV_RS13245 NONE SFV_RS13240 2424378 .. 2424401 - -12.4 -3.63744 TTCCCCTTGAAAATA CTCCGGCAGC GTTA GCCACCGGAG AGGAAATTATTTCAG 95 32 SFV_RS13235 2422797 .. 2422837 - -12.6 -3.93583 GAATTTACTCATAAA CTCTGCGCCC-GCTGGGAA GAGA TTGCCTGCCGGGCGCAAAG TGACAAAACGCGAGT 93 509 SFV_RS13215 NONE SFV_RS13210 2419917 .. 2419931 - -3.5 -3.2115 TAAATTACGGATTAA TCGCG ACCTG CGCAA TGATACTTTGATCAT 46 0 SFV_RS13205 2419285 .. 2419298 - -9.5 -3.17553 CTAAAAATGTTAAGA GCCGC AATT GCGGC TCTTTTTTCATTCTG 72 33 SFV_RS13185 2413841 .. 2413856 - -3.3 -3.45707 TAAAGATTCAAAAAT TTGTG CAAATT CACAA CTCAGCGGGACAACG 50 42 SFV_RS13180 2413305 .. 2413323 - -6 -5.76949 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT 100 51 SFV_RS13175 NONE SFV_RS13170 2412074 .. 2412091 - -9.8 -5.24129 TTCTGCCATAAAAAA GCCCCG ACGAGA CGGGGC TAAATCATGATCAGG 100 45 SFV_RS13165 2410015 .. 2410042 - -4.8 -4.56597 TCTTGCTGGCAAAAA CGCGACTGGAAGC GAC GCTTGAAG-CGCG TCGCAGCCAGGAGAT 70 175 SFV_RS13150 2406295 .. 2406324 - -15 -5.86061 TTTTACTAAAAAAAA GCCGCTGGGGTT TAAAAC ACCCCCAGCGGC TCGTTTTTTACACTA 100 71 SFV_RS13145 NONE SFV_RS13140 NONE SFV_RS13135 NONE SFV_RS13130 NONE SFV_RS13125 NONE SFV_RS13120 NONE SFV_RS13115 NONE SFV_RS13110 NONE SFV_RS13105 NONE SFV_RS13100 NONE SFV_RS13095 2393731 .. 2393743 - -5.5 -4.08216 TTATTCCTTGTAAAA GTCCC GTC AGGAC CGGATTTTCAACGAA 65 153 SFV_RS13090 NONE SFV_RS13085 2390671 .. 2390689 - -11.7 -5.76949 GAGCGCCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA 100 50 SFV_RS13060 NONE SFV_RS13055 2387155 .. 2387185 - -13.4 -2.85847 AAGCCTCACATTATA CGGGGTACTACA AAAAAAA TGCAGTACCCCG GTGTAGGGAGGTTTT 86 39 SFV_RS13050 NONE SFV_RS13045 NONE SFV_RS13040 NONE SFV_RS13035 NONE SFV_RS13030 NONE SFV_RS13025 2380065 .. 2380079 - -5.8 -3.23045 ATTTACAGATTAACA GATAAA CTC TTTATC AACGGCAATGGAATG 54 71 SFV_RS13020 2379578 .. 2379592 - -2.1 -4.08164 AAAACGCTACATAAA CTTGC GCTAA GCAAA GCCTATGCCTTGCTC 56 181 SFV_RS12980 2371462 .. 2371483 - -13.1 -2.93073 CTTCTTTAACAATGA TGACAGCCA TCAC TGGCTGTCA GATTGAAAATTTAGT 86 36 SFV_RS12970 2370192 .. 2370204 - -3.3 -3.38832 TAGTAAGAAACTGAA TGCCG CGC CGGAA GGGATCAGAAACTGG 48 30 SFV_RS12965 2368901 .. 2368917 - -4.3 -3.72576 TGCCGGTGCAGTAAA CCGGCAC AGA GTGGCGA AATCAGACGGATAAA 58 28 SFV_RS12960 2368359 .. 2368391 - -7.7 -3.43553 ATAACCACTAATTAA CACAGGCCCACAG CCGATCC CCATGGGCCTTTG ATATCAATAACTACC 67 29 glpT NONE glpQ 2360401 .. 2360426 - -15.5 -2.86743 AAATTTGATATGAGA CAGGATGGCGC ATGA ACGCCATCCTG CAGTAACATTACTCT 93 34 SFV_RS12920 2359219 .. 2359244 - -7.6 -3.53811 TTCAGCCGGGGGAAA TTTTGCCCTG TTGTTG CCGGGCAAAA GGCGATATTGAAATC 65 103 SFV_RS12885 2349538 .. 2349549 - -7.2 -3.50393 CCGTAGGCCAGATAA GGCG TTTA CGCC GCATCCGGCAATTGT 65 57 SFV_RS12875 2345884 .. 2345905 - -8.7 -4.55023 CCTAATACGACAAAA GCCCAGACT TTGC AGCCTGGAC TTTTCAATTCAAACA 87 77 SFV_RS12870 NONE SFV_RS12865 2343492 .. 2343508 - -4.3 -3.42241 AAGAGACAGGGACAA GCACGCT GCT ATCGCGC CAGAAAATTTAAACG 52 17 SFV_RS12860 NONE SFV_RS12855 2340430 .. 2340442 - -6.2 -2.87622 CAGGTCGAGAACAAC GGCG AGGTA CGCC CAGCGCTTACCCGTC 55 432 SFV_RS12850 NONE SFV_RS12845 NONE SFV_RS12840 NONE SFV_RS12835 2335175 .. 2335230 - -6 -4.78157 ACGAAAAATAAGAAA TGACCAATCTGCCGACGCTTGTTAAT GGTT ATATCCTGGCGTCGGCAGATCGCCCA GCAGTCTTATCTGAA 80 74 SFV_RS12830 2332079 .. 2332112 - -12.5 -3.00585 GATTACATTAAAGTA GGCCAGATAAGACGC GTCA GTGTCTTATCTGGCA TTTGCACTGAATGCC 83 68 SFV_RS12815 2328144 .. 2328155 - -3 -3.965 GGTTAAAATCAATAA CTTA TTCT TAAG TATTTGACAGCACTG 54 7 SFV_RS12810 2326722 .. 2326735 - -9.5 -5.43514 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCCA 100 47 SFV_RS12805 NONE SFV_RS12800 NONE SFV_RS12795 NONE SFV_RS12790 2322042 .. 2322072 - -9 -2.79183 GGGATTTTTAGCATA TTGACCTGACGG CAGCAGT CCGCCAGGTCAG CGTCGTAATATTATG 66 36 SFV_RS12780 2320203 .. 2320235 - -17.1 -2.82516 CGTCTTATCAGTATA CGCCACATCCGGCAT ACC ATGCAGGATGTGGCA CATCATTACAACGCA 100 31 SFV_RS12765 NONE SFV_RS12760 NONE SFV_RS12755 NONE napG NONE napH NONE napB NONE SFV_RS12735 2313347 .. 2313357 - -4 -3.09193 AGCATACCCACGCAA TAAC CCT GTTA AAAACCTGGCTCGAC 47 23 SFV_RS12730 2312709 .. 2312725 - -2.1 -3.741 TCAAGACGGAAAATA CGCCAGA ACA TCATGCG GCCCTCGTTTGCGTC 51 19 SFV_RS12725 2312057 .. 2312083 - -3.1 -2.59883 AAAATCAGTAATCCA GCGTTATTGAAT GCTG ATTCG-TAACGC TGCCGCCGTCGCAAA 42 2 SFV_RS12720 NONE SFV_RS12715 NONE SFV_RS12710 NONE SFV_RS12705 NONE SFV_RS12700 2308103 .. 2308115 - -3.3 -5.07486 CACGCCCAATAAAAA CCTCA TTG TGCGG CCTCCTTACTGTATT 74 15 SFV_RS12695 2306849 .. 2306875 - -8 -5.18726 GGGGCACAATAAAAA TAGCCCGATG GATTTAT CATCGGGCTG AGATTTATGACAAAC 91 206 SFV_RS12685 NONE SFV_RS12680 2303202 .. 2303218 - -8 -5.4756 AATCCCAAGAAAAAA CCAACC CTTAC GGTTGG TTTTTTTATATCTGC 100 94 SFV_RS12660 2299721 .. 2299736 - -11.8 -5.06103 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTATCTGCA 100 126 SFV_RS12645 NONE SFV_RS12640 2295433 .. 2295450 - -2.7 -4.26202 ACATGCATCAACAAA GGAAG CCTTTTAC CTTCC TCGTTGTGCAATAGA 58 41 SFV_RS12635 2294450 .. 2294470 - -6 -3.37487 TTAGATCCTGAAACA CGCCACCG TTATC CGGCGGAG TTCTCTGGTGGTCAG 56 344 SFV_RS12580 NONE SFV_RS12575 2281023 .. 2281035 - -4.8 -3.2614 CACGCTCTATACCAA CACG TCGCG CGTG GGCTGGATCATCGCA 49 145 SFV_RS12565 NONE fruK NONE SFV_RS12555 2275797 .. 2275829 - -17.9 -3.72576 TTTGCGCTCATCAAA TGTTACAGGGCAGGA AAT TTCTGCCCTGTAACA CACCTTTTATTACGC 100 35 SFV_RS12550 NONE SFV_RS12545 2273481 .. 2273498 - -10.5 -3.74693 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGCTTGA 80 75 SFV_RS12540 2271710 .. 2271732 - -4.1 -3.57808 GTTAATCGACAAAGA CCATGAACCG CGTG CGGTGCA-GG CTATTGAAGAGTGTT 53 497 rihB 2270318 .. 2270349 - -12.2 -3.57406 TGCCCATCAGAAATA GCCGGGCCTGCATC TTGC GATACTGTCCCGGC TTGTTATCAACACTT 89 39 SFV_RS12525 2268961 .. 2269001 - -6.9 -3.63569 CCAATGGTGTAACAA TGTTGCCGGATTCGACGC TTGACC GCATCTAATCCGGCT-CA TAAATTGCACACTAC 64 37 SFV_RS12505 NONE SFV_RS12500 2263190 .. 2263209 - -13.6 -4.75776 AATGGAATTGAAAAA GCCCTCTC GGTT GAGAGGGC TTAGCAAGGAAGGGA 100 47 SFV_RS12495 NONE SFV_RS12490 2260919 .. 2260941 - -3.3 -3.76952 TTTACTGAAGTGAAA GTCCGCCCGG TTCG CCGGGCAT-C TTCTCATCAGAAGCG 53 32 folE NONE SFV_RS12470 2258052 .. 2258069 - -2.7 -3.23899 TGTTAACGAATGTAA TCCAGAT CGTT ATCTTGA TGTTTTAGATATTGC 45 17 SFV_RS12460 2256850 .. 2256867 - -6.3 -3.08371 CACATTGTTAAGATA CTGTGAA ATCA CTCACAG ATTGAAAGCGGTTAC 56 37 SFV_RS12455 2255570 .. 2255592 - -14.9 -3.88232 TTGGCCATACAATAA GGGCGCAGT AAACG ACTGCGCCC AATCAGTCTTATTTC 100 34 SFV_RS12450 NONE mglC 2252961 .. 2252976 - -2.5 -4.11484 GGTAACGTTGTAAAA CCAGA GACGCA TCCGG CAATATCCGCAATCA 56 43 SFV_RS12405 2245652 .. 2245691 - -10.6 -2.71364 TCACTGGCGCAAGGA GCACGCAGGGGGCGAC CAATCGCC GCCGCCCCCTGCCCCC CCGGGCTCTGGCGAA 74 251 SFV_RS12395 NONE SFV_RS12390 2242848 .. 2242862 - -5.6 -5.06414 GCGCGGGAAGAAAAA GCCGGA TAA TCAGGC GTAAAGCAGTTGCCA 80 146 SFV_RS12380 2241483 .. 2241518 - -11.2 -3.75015 AGAATCGTGAGTAAA TGCTGCATTGCTGACA TTTA CGCCAGCAATGCAACG TCAAAGAACTTTCTA 91 38 pbpG 2240394 .. 2240417 - -11.8 -3.28472 GTGGAGTAAAAATTA CGGATGGCAGA GTA TC-GCCATCCG AATTCACTTAATCGT 85 33 SFV_RS12365 2236149 .. 2236167 - -12.4 -3.71607 TGAACATCAGGCAAA GGGCGCAA ACG TCGCGCCC TTACTAAAGCATTAC 100 37 SFV_RS12360 NONE SFV_RS12355 NONE SFV_RS12350 NONE SFV_RS12345 2231993 .. 2232008 - -3.2 -3.27923 GCCCAACAGCAGCAA CTCACC AGTT GGCAAG AACAAGGCCATGATA 47 208 SFV_RS12310 NONE SFV_RS12305 2227762 .. 2227774 - -4.8 -2.62184 TGTCGCCTTAGAGGA TGCC GTCGT GGCA CTGCCCTTCGCTGCT 45 236 SFV_RS12295 NONE SFV_RS12290 2225463 .. 2225477 - -4.2 -2.64099 GCTGCTGATGATAAT GCTATC ACG GATGGC TCAGTAACATTTAAT 43 391 SFV_RS12270 NONE SFV_RS12265 2223445 .. 2223463 - -7.4 -4.13995 TCGCGATAAATTAAA TCAGGAAG AAC CTTCCGGA GAGGCGGGCCATTCA 72 147 SFV_RS12260 NONE SFV_RS12255 NONE SFV_RS12250 2220913 .. 2220935 - -6.2 -3.84825 GGGAGTGACAGCAAA TGACCTCCGC ACT GCCGAAGCCA TGGTCAGAAGCCGTG 63 343 SFV_RS12235 2218252 .. 2218284 - -8.4 -3.10012 AAGTTTACCAGCCAA CCGCAG-CACGTCCT GCAT ACGTCGTGTCTGCGG TTTTTCTTTTTCGCT 66 40 SFV_RS12220 NONE SFV_RS12215 2213565 .. 2213575 - -3.2 -4.68593 TTGATGAGGCAAAAA GCCA TTT TAGC AGTCTTTTACAGGCC 66 32 SFV_RS12210 2212656 .. 2212682 - -8 -4.29073 GAAGAATCGAAGAAA TTCAGCGCCAAT CTG AACGGCACTGAA ATTGCCATTACCTAT 76 408 SFV_RS12200 2212102 .. 2212113 - -5.8 -4.13014 GTCATACGCGTAAAA CAGC CAGC GCTG ACGTGATTTAGCACC 65 109 SFV_RS12160 2201603 .. 2201635 - -6.3 -4.85782 TGCGGCAAAAACAAA TACACCGCATCAATA TAA CATCTCTGCGGTGTA TGAAGAATAACCAGA 80 55 SFV_RS12155 2201060 .. 2201089 - -15.3 -5.5353 GATATCAATAAAAAA GACGAAATCATTT ATAT AAATGATTTCGTC TTTCTAAATGCAATT 100 58 SFV_RS12145 2200230 .. 2200249 - -10 -4.98531 CTCTTAAATTAAAAA GCCGCCAT GGGG ATAGCGGC CATGTTTATTACCTG 93 63 SFV_RS12140 NONE SFV_RS12135 NONE SFV_RS12130 2198741 .. 2198753 - -3.3 -3.07895 GTCATTCTCAACATA GGCAG CTC CTGCA ATTAAATTTTGTCAC 45 27 SFV_RS12125 NONE SFV_RS12120 2195134 .. 2195154 - -11.1 -5.42259 TCATCGCTAAAAAAA GCCCCCTCA TCA TGAGGGGGA AATGCAGACACCTTG 100 81 SFV_RS12105 2193139 .. 2193150 - -5.8 -2.72013 ACGTGAAGAAGCAAT GACC TGGT GGTC CGTGACTTCCCTACG 50 204 SFV_RS12100 NONE SFV_RS12095 2191515 .. 2191529 - -3.5 -2.66008 AAAGCAGCTATAGTA CGGTG CTCAC CACCA GGCGTGGAAGTGGTG 42 17 SFV_RS12090 NONE SFV_RS12085 NONE SFV_RS12065 2185135 .. 2185156 - -13.7 -5.58209 TGAAAGGCAAAAAAA CGGCCTCCC GATA GGGAAGCCG TAGCAAAGTGCGCGT 100 188 gatY 2184147 .. 2184168 - -8 -2.71712 TTTTCCTTGTTAAAT GGCAGGTGC GTTAT GC-CCTGCC CTCGCAGCCACAATC 60 14 SFV_RS12055 NONE SFV_RS12050 NONE SFV_RS12045 NONE SFV_RS12040 2180733 .. 2180743 - -4 -3.26405 CTCAGGTAAAAATTA TTCT GCG AGAA CGGCTTTCTCTTGTT 48 12 SFV_RS12035 2179613 .. 2179635 - -17 -2.52623 CTGTTTGCACAATAC CGGGCCAGCA TCA CGCTGGCCCG CGGTTTCATGGAATG 100 31 SFV_RS12030 2178712 .. 2178756 - -13 -3.39595 TTGAACCAGGGAGAA TCCGTAATGCCGGATGCGGTG TAAA CACCTTATCCGGCA-TACAGA ACAATACTACACCGT 95 32 SFV_RS12020 NONE SFV_RS12015 2176574 .. 2176584 - -8.2 -4.24948 TGAGCACATGGAAAA CGCC AAA GGCG AAGCTATGCCGGTCG 78 319 SFV_RS11965 2159551 .. 2159569 - -5.2 -3.30124 TTGTAGGCCTGATAA GACGCGTT AGC ATCGCATC AGGCAATGGGCAAAC 54 47 SFV_RS11955 2157100 .. 2157140 - -6.1 -4.83615 CAGGCGGCAGAAAAA CTGGCTCAGGCGCAGGCT GATTTA AGCC-GCTGCTGAGCCAT TTTCTTTTAACGAAA 80 32 SFV_RS11935 2152149 .. 2152174 - -4.1 -2.72379 TTAAGTTGTCAAGCA TGTTATGACCCC TGC GGGGT-ATAAAA AGTCCCGTCGCGCAT 45 2 SFV_RS11925 NONE SFV_RS11920 NONE SFV_RS11915 2147975 .. 2148008 - -7.9 -3.14548 AATAAGATGAGGGAA CCGCGCCAGCGGCGA TTTA CCGCCGGGAGCCCGG GTTGCCAGGGTGGTG 64 217 SFV_RS11905 NONE SFV_RS11900 NONE SFV_RS11895 NONE SFV_RS11890 NONE SFV_RS11885 NONE SFV_RS11880 NONE wcaD NONE SFV_RS11870 NONE SFV_RS11855 NONE SFV_RS11850 NONE SFV_RS11845 NONE SFV_RS11840 2133236 .. 2133248 - -6.2 -2.58861 CAGTATTTTCATAAT CCGG GTACT CCGG CACGCTTCTCAGCGA 53 6 SFV_RS11835 NONE cpsB 2130513 .. 2130554 - -11.5 -3.41587 GCCTACAAAACCGAA CCGTAGGTCGGATAAGGCG TTCA CGCCGCATCCGACAAACAG CGCCTGATGCGACAT 83 41 SFV_RS11825 2128999 .. 2129027 - -2.4 -3.14878 TGGGGTAAGGGAAGA TCCGACATTACT CGTTC AGCAACGTCAGC AGAGTTCGCGTTCGC 44 4 SFV_RS11820 NONE SFV_RS11815 2126027 .. 2126039 - -9.1 -3.37796 CCGTAGGACGGATAA GGCGT TTT ACGCC GCATCCGGCAACCGT 71 63 SFV_RS11810 NONE SFV_RS11805 2123407 .. 2123419 - -5.5 -3.85698 GTTCTCCTCTATAAA GCCTG CAG CAAGC TGGCGAGTTCTCGAT 61 6 wcaM NONE SFV_RS11795 2120758 .. 2120772 - -4.2 -3.89903 AAACAGCCGTAGAAA CAAGGA AAA TCCTGG AAAAATTTGAATAAT 57 180 SFV_RS11790 NONE SFV_RS11785 2118533 .. 2118557 - -8.5 -2.52543 ATTCCTTTTAATTCA TCTCGCTCTAG CAT CATGAGCGAGA TGCAATAATTTGTTA 63 38 SFV_RS11780 NONE SFV_RS11775 NONE SFV_RS11770 NONE SFV_RS11765 NONE SFV_RS11760 NONE SFV_RS11755 NONE SFV_RS11750 2112440 .. 2112453 - -5.3 -4.15044 TGTGTTTTTAACAAA TCGTT TACT AACGA AAAATGAAATATTTT 63 19 SFV_RS11745 NONE SFV_RS11740 2111344 .. 2111362 - -3.2 -4.34482 CTCCTTAAAAAAAGA TGACAATA CAA TATTACCA ATGACAAAAAATGTC 62 109 SFV_RS11735 2110589 .. 2110608 - -4.2 -2.9735 ATATAACAAATATGA TGGCTCCA TATA TGGCACCA AATAGTTTTACGCCA 46 92 SFV_RS11730 NONE SFV_RS11725 NONE SFV_RS11720 2108102 .. 2108124 - -11.2 -5.75945 ATTTGGCAAAAAAAA GCCCGGTGCA ATA TACGCCGGGC CTCAATTTTATTGTT 100 53 SFV_RS11715 2106751 .. 2106771 - -8.3 -4.0865 TGTAACAAAAGACAA TCAGGGC GTAAATA GCCCTGA TAACAAGATGTTAGT 78 36 SFV_RS11710 2105610 .. 2105635 - -14.7 -5.75945 ATCCGGCAAAAAAAA CGGGCATGGTG TCAC CACCCTGCCCG TTTCTCTTAAATGCA 100 49 SFV_RS11665 NONE SFV_RS11660 NONE SFV_RS11655 2096669 .. 2096685 - -8.1 -3.53184 TATCAAAACTGACAA TTCATTC TAT GAATGAA TCTGTTCAATAATGA 67 31 SFV_RS11650 2095742 .. 2095765 - -3 -2.87344 CAGTGGTTTCATACA CGCCCCCTTGC AGT GCATGCGG-CG TCCTGCTGGCGTGAT 42 44 SFV_RS11645 2094697 .. 2094723 - -7.3 -5.26875 GTTTGAAGCAAAAAA TAACCGACGCT AATTA AACGTCGGTTT TTAATCATTTTTTGA 91 57 SFV_RS11640 2093136 .. 2093163 - -12.8 -6.04419 AAAAGAATAAAAAAA CCGGAGCCAAAT GTTC ATTCGACTCCGG TTTATTATTAGAAAA 100 46 SFV_RS11635 NONE SFV_RS11630 2091255 .. 2091269 - -2.1 -4.08064 AATTCTGCGTGAAAA TC-CGC AAGT GCGTGA AAAAGTGGTAGCGAT 56 462 SFV_RS11620 NONE SFV_RS11615 2088226 .. 2088248 - -7.7 -3.81951 TCCTACAGCACCAAA TCAGGTCTG GGTGG CGGACCTGA CGTATGTTGCCACAC 71 356 SFV_RS11600 2086274 .. 2086292 - -3 -3.70902 GTTTTCATATTCAAA TCTCCTGC AAT GTGGGAGA TTTGAGTATGGTTGT 50 106 SFV_RS11595 NONE SFV_RS11590 2085523 .. 2085541 - -2.5 -3.60323 CATTACGAAATAAGA TGGC-ATT ACGG AATAGCCA GACTTTCTCGTGTTA 50 325 cobU NONE cobS NONE cobT NONE SFV_RS11565 2081959 .. 2081976 - -11.3 -5.22039 GCCAAATTCAAAAAA GCCTGCT TTTG AGCAGGC TTTTTACTTTCTAAT 100 52 SFV_RS11555 NONE cbl 2079550 .. 2079568 - -11.7 -4.12942 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG 93 32 SFV_RS11540 2078625 .. 2078638 - -3.1 -3.07318 AATATAACGAGAAAT GGTTA AACC CAACC CAGCCCCGACCAGGA 45 14 SFV_RS11535 2078127 .. 2078137 - -2.6 -3.99957 CCAAATAGGCATAAA TAAA GCA TTTA GCTAAATCAGAATCA 54 27 SFV_RS11530 2077731 .. 2077742 - -4.4 -3.35278 TGAACTACAGAGGAA TCGT GAGA ACGA GGCGAATATTAGCGA 52 113 SFV_RS11525 2077563 .. 2077591 - -19 -5.4387 ACAGAAATCAAAAAA CCCGGCCACTTT TTTAC AAAGTGGCCGGG TAAAAATAATTTTTA 100 88 SFV_RS11490 NONE SFV_RS11485 2071307 .. 2071328 - -10.1 -2.90813 CACTCTGGCAAATTA CCACCACCT CTAC AGGAGGTGG TTCTATATAGACTTT 72 78 SFV_RS11465 2068438 .. 2068449 - -2.2 -4.36596 GGTAGAAGCAAGAAA TCGC GCAG GCAA AATTTCAGGTATTTT 60 270 SFV_RS11450 NONE SFV_RS11445 2066337 .. 2066364 - -9.2 -2.60763 GCTATATCTCATAAC CGCCGCTAAC TATATACG GTTAGCGGCA ATTAGGGTTGAACAT 66 40 SFV_RS11430 2064722 .. 2064737 - -3.2 -5.42862 ACACCCCTAAAAAAA GGGCAT TTAT ATGTCC AAACATTAATATCAA 81 352 SFV_RS11420 2064173 .. 2064186 - -9.5 -5.49579 CCAGAAAAAACAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG 100 96 SFV_RS11410 2063263 .. 2063297 - -8.5 -3.12595 GCGAACGACGTAATA CCGC-TTCCGGTAGCG CGTC CGCCACCTGATTGCGG ACCGCCCACCAGGAT 66 121 SFV_RS11405 NONE SFV_RS11400 NONE SFV_RS11395 2061503 .. 2061513 - -2.4 -3.67296 CACCACTGAGCTAAA GGGC CGG GCGC AGGATAATAACGTTA 49 46 SFV_RS11390 NONE SFV_RS11385 NONE SFV_RS11380 NONE SFV_RS11375 2060977 .. 2060988 - -7.2 -5.79595 TTTGAAAAGAAAAAA CCGC AAAA GCGG GCGAAACGATATATA 100 235 SFV_RS11370 NONE SFV_RS11365 NONE SFV_RS11360 NONE SFV_RS11355 2059171 .. 2059184 - -2.3 -3.37796 TTTCAGCAGGCAGAA GGCGA TGTG TCTCC CGGGGAAGTTCTGCC 45 139 SFV_RS11350 2058746 .. 2058760 - -4.2 -3.53444 GGAGTGTCCGTTAAA CTCAGG CTA CCTCAG AGTGTCATCTGCGTG 52 17 SFV_RS11345 NONE SFV_RS11340 2057403 .. 2057420 - -4.8 -3.12351 TGGTGTCACAGTGAA TGGGGC TATCTC ACCCCA TTTGCCACTTTGCAG 51 144 SFV_RS11335 NONE SFV_RS11330 2056500 .. 2056522 - -6.2 -3.84825 GGGAGTGACAGCAAA TGACCTCCGC ACT GCCGAAGCCA TGGTCAGAAGCCGTG 63 343 SFV_RS11315 2053574 .. 2053588 - -5.8 -4.77986 TCAAAGAGTTAAAAA TTTTTC TTG GAAAAA ATGTCTTAAAATCGT 76 323 SFV_RS11285 NONE SFV_RS11280 2047504 .. 2047536 - -12.1 -2.67017 AAGCGCATAATCAAT CGCAGCCACGT TAATACTCACG ACGTGGCTGCG TTTTTTCACGGTTAA 79 65 SFV_RS11250 2044563 .. 2044578 - -6.8 -2.82623 TTCGTCTGAGAATGA CGTGCA ACTG CGCACG CGACACCCGGAGACA 53 55 SFV_RS11235 2042580 .. 2042597 - -4 -2.90212 CCAGCACCCGACAGA GCAGGC GAACAG GCCAGC AACAGGAGTTGTCAC 46 56 SFV_RS11230 NONE SFV_RS11225 NONE SFV_RS11220 2040863 .. 2040883 - -13.3 -3.15999 CCTGCATAGATTTAA CCGGCCATC TGA GATGGCCGA CAGGTTAACATAATT 91 63 SFV_RS11215 NONE SFV_RS11210 NONE SFV_RS11200 NONE SFV_RS11195 2036687 .. 2036705 - -14.6 -2.62983 GGCATTGGGACACCA GGCCGGAT GTG ATCCGGCC TGGTGTTAATGATAC 89 45 SFV_RS11190 NONE SFV_RS11185 2034651 .. 2034672 - -2.9 -3.73647 GCGACCTATCAACAA TTGTCAGGC AGAC GCCCAACCA CACTTGGCCTGGGCG 53 213 SFV_RS11165 2033131 .. 2033164 - -13.9 -3.04248 CAACATGCGCTAACA CATTCTGACTGGTGG TTTC CCACCAGTCAGGCTG AATAAGATTACTCTG 87 33 fliE 2021230 .. 2021240 - -2.4 -4.32067 GATGGCAGAAAACAA CCAG GAT CAGG TATCCATTTTAAACC 60 126 SFV_RS11075 2020562 .. 2020576 - -7.8 -2.95896 TCATTATGCATAAAG GCGCAA TGA TCGCGC AAATGCAATCATAAT 61 113 SFV_RS11070 NONE SFV_RS11065 2018663 .. 2018698 - -14.2 -3.68529 ATCTGATTACTCAAA GATATGTTGTGGGAGGC TTT GCCTCCC-CAACATATA AGTGGCGCTCTCAAG 100 464 SFV_RS11050 NONE SFV_RS11045 NONE SFV_RS11040 2015274 .. 2015324 - -7.6 -4.66833 GGGTAATGTCAAAAA CCAGGGCGCGGAGTTAATTCAAC CTGTTT GTTGACATC-CTCCACGCCCTGA ATGACGAGGACCCCT 82 48 SFV_RS11020 2012467 .. 2012487 - -14 -2.66272 GGTGATTTAAATCCA TCCCCGGC GGCAA GCCGGGGA GATTTCATTACGGCA 86 33 SFV_RS10995 2006735 .. 2006751 - -15.1 -5.15969 GCCGAATGTAAAAAA CCCCGCC GGT GGCGGGG TTTGAGAGGCATTCA 100 46 fliA NONE SFV_RS10985 NONE SFV_RS10980 2004365 .. 2004382 - -8.4 -5.63517 CGCGTAAATAAAAAA GGCGCT AGTGAA AGCGCC CTTTTTTGTCATTAT 100 46 SFV_RS10975 NONE SFV_RS10970 NONE SFV_RS10965 2001834 .. 2001844 - -8.2 -2.73441 TATCACGCTTGAAAT GGCG TCC CGCC CCGACAGGTGAATCG 60 61 SFV_RS10960 2001005 .. 2001031 - -12.3 -4.70583 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTATTGACAAAATCA 100 18 sirA NONE uvrC NONE SFV_RS10935 1997221 .. 1997233 - -4.1 -3.60431 AAAATTACGCCGAAA CGATC ACT GATCA AGCAAATCTGCACGC 53 16 SFV_RS10930 NONE SFV_RS10925 NONE SFV_RS10920 1996710 .. 1996723 - -8.1 -5.64274 GCAGGCACAAAAAAA CCACC CGAA GGTGG TTTCACGACACTGCT 100 72 SFV_RS10915 NONE SFV_RS10905 1994167 .. 1994210 - -2.2 -4.60797 CCTCGACACACAAAA CTAATGCTCTCCGGCGGCAG GTTT CTGCCGCCGTTTCAAATCAG TGACGGCAAATCTTA 64 22 SFV_RS10885 1992431 .. 1992458 - -13.5 -3.86822 GAAGTTTTTGAGAAA CCGCTGCCTCA TCTGTT TGAAGCAGCGG TTTTTTTAATGGGAT 100 31 SFV_RS10875 NONE araG 1988524 .. 1988534 - -2.4 -3.07816 TCCTTACTCAGGCAA CTGC CTG GCTG ACTTTAGGCATCGCA 42 7 araH 1987451 .. 1987476 - -12.6 -3.81414 ATTTGCAACGAAGAA CAGCCAACCG TTGTGG CGGCTGGCTG TGGTGGGAAAAAACG 100 64 SFV_RS10860 NONE SFV_RS10855 1984790 .. 1984803 - -2.3 -4.08692 CAACTGCTGGCAAAA GCGGT ATCT ATCGC CAGGCCAGTAAAGGG 56 381 SFV_RS10845 NONE SFV_RS10840 1982960 .. 1982983 - -12.5 -5.75342 TTGGGGCAAAAAAAA GCAGCGGTA CGTCGT TACCGCTGC TGGAATGTTGCGCCA 100 52 SFV_RS10835 NONE motB NONE SFV_RS10825 NONE SFV_RS10820 1978531 .. 1978551 - -8.3 -5.67283 AATTGAAATAAAAAA CCCGATG CGCAGAT CATCGGG TTCATTTCAATTGAG 100 54 SFV_RS10815 NONE SFV_RS10810 1975100 .. 1975129 - -2.1 -2.90763 CCCACAGGGCAGAGA TGAAGTCATAGCG CCTT CTCAATCACTTCA GGATACCACTGGCGC 41 23 SFV_RS10805 NONE SFV_RS10800 NONE SFV_RS10795 NONE SFV_RS10790 1971680 .. 1971692 - -2.7 -4.17657 CAGTACACCTCAAAA CACTA CGC TAATG AGTTGGGATGCCGTG 60 470 SFV_RS10765 NONE SFV_RS10760 1968552 .. 1968562 - -5.4 -2.78216 CATTCTCACGAAGTA GCAA ACT TTGC TCGCGGGATAGGAAT 50 183 flhB 1966859 .. 1966871 - -3.4 -3.38272 CACCATCATCGACAA GATC AACAG GATC AAAATCGGTCCGGCA 48 52 SFV_RS10750 NONE SFV_RS10745 NONE SFV_RS10740 NONE SFV_RS10735 1963703 .. 1963713 - -5.4 -3.35597 TGTATCCGGCAAACA CATC AAT GATG AACGCCACATAGACG 56 117 SFV_RS10730 1962812 .. 1962822 - -6.8 -3.92996 CGTTATATAGAACAA GTGC CAC GCAC AGGTGCAAAAAAACT 68 492 SFV_RS10715 1959892 .. 1959913 - -2.1 -2.70932 TTTGCTCCTTAATTA CGCTGACTG CTCG CTGGCAACG ATCTCTTCAATGGAC 40 1 SFV_RS10710 1959057 .. 1959081 - -10 -5.64274 TCAGGGATAAAAAAA GGCCCCTG TTGAAATTG CAGGGGCC TGGTACGAGCAAGCA 100 73 SFV_RS10705 1957635 .. 1957653 - -3 -3.14132 TTCCTCCCTGATCAA CGAGGATC ACT GTTTCTCG GTAATATCTTTGGCG 45 13 SFV_RS10700 1956184 .. 1956196 - -4.1 -3.44051 GTTCGAGCATTATAA CGAAT GGC ATCCG CATAGTGCGCTGGGT 52 126 SFV_RS10695 1955343 .. 1955355 - -4.1 -3.70007 ACGATGGAAAATGAA CTCCT CAA AGAAG CCGTTGAATATGGAC 53 96 SFV_RS10685 1953819 .. 1953844 - -6.7 -2.57564 TTACGTTTGCATAAC CTCAGCGCCCG TTTC CGGGCGCTATT CACTTCTTACGCCTG 55 32 SFV_RS10660 NONE SFV_RS10650 NONE SFV_RS10645 NONE SFV_RS10640 NONE SFV_RS10635 NONE SFV_RS10630 1945699 .. 1945737 - -9.9 -4.73388 AAGTTTTAGGAAAAA CTTTCTTTAAAAGCTCT GTTTA AAAACTCTTAAAGAAAG CCCTAACTCATGATT 91 350 SFV_RS10625 1944483 .. 1944517 - -8 -5.4251 CTCATATACAAAAAA GGGAGAG-CTACCGA TGTCAC TCGATAATCTCTCCC GTTGATTTTTACCCA 95 312 SFV_RS10620 1942298 .. 1942317 - -4.4 -3.23216 TTCGACTATTATCAA TCATC-TTC TGG GAATGATGA ACTTAATAGCGTAGC 50 2 SFV_RS10615 NONE SFV_RS10610 NONE SFV_RS10605 1940184 .. 1940203 - -4.2 -3.62046 CTATCGTTTTAATAA CCGGGATG AAGC CATCTCAG TAATACGGGAATACA 53 176 SFV_RS24500 1938942 .. 1938956 - -2.8 -4.73092 ATAAGGTAAAATAAA CTCATG GCG CATCAG CGCAGCACCTCCTGC 65 22 SFV_RS10590 NONE SFV_RS10585 1937827 .. 1937837 - -8.2 -5.64274 TCAGGCATAAAAAAA CCGC TCG GCGG CGGGTTTTGCTTACT 100 96 SFV_RS10580 NONE SFV_RS10575 1937570 .. 1937585 - -4.6 -3.05384 TGCCTGCTGAGCTAA GTCGGC GCTG GCCCAC CACCGAGGACTCGAA 49 18 SFV_RS10570 NONE SFV_RS10565 1937146 .. 1937161 - -3.9 -5.24129 GCGCTGTACAAAAAA CCGCC AGCCAA GGCAG TTAAGAGTGTGTTCC 79 286 SFV_RS10555 1934844 .. 1934854 - -6.8 -2.82036 ACAGATTATCGAAAT CAGC CAC GCTG CCTCCCGTTATTGCA 55 33 SFV_RS10550 NONE SFV_RS10545 NONE SFV_RS10540 NONE SFV_RS10535 1932719 .. 1932736 - -14.1 -4.65895 CTCCGGATGCAAAAA GCCCCGG ATAA CCGGGGC AATGATGAGTATCGT 100 45 SFV_RS10530 NONE SFV_RS10525 NONE SFV_RS10520 NONE SFV_RS10515 NONE SFV_RS10510 NONE SFV_RS10505 1927280 .. 1927290 - -2.4 -2.55351 CGTTTTCACACGAAG GTCG ATG CGGC GGCCAAATCGTTGCA 39 5 SFV_RS10500 1926696 .. 1926709 - -9.5 -4.64846 CCATAAACGACAAAA CCGCC CGCA GGCGG TTTCACATGAAACAT 91 47 SFV_RS10495 1923154 .. 1923171 - -11.3 -5.4505 TTCTGCAATAAAAAA GGCACCA TTTC TGGTGCC CGTATCTGGGTTATA 100 45 SFV_RS10490 1922477 .. 1922496 - -10 -4.85599 TTCACCCCACAAAAA GCCCGCCTG AAC CAG-CGGGC TGTCATAACACTGTG 91 53 SFV_RS10480 NONE SFV_RS10475 NONE SFV_RS10470 1919953 .. 1919975 - -6.2 -3.84825 GGGAGTGACAGCAAA TGACCTCCGC ACT GCCGAAGCCA TGGTCAGAAGCCGTG 63 343 SFV_RS10450 1917018 .. 1917034 - -3 -4.07687 AGTGTTGCCCGAAAA CTGG-TG GCAA CATCCAG CTGCATTAGGTGCAA 58 412 SFV_RS10430 1913212 .. 1913227 - -3.2 -3.05384 GCCGCCTTGATGCAA CGCGAA TGAT TTCGTG TATTTGAGTCATATC 45 39 nudB 1912648 .. 1912659 - -3 -4.83615 GACCTGCCATAAAAA TATC TCCA GATA GCCCTGCCTGTTCAG 68 37 SFV_RS10420 1911909 .. 1911919 - -3.2 -2.96395 AGGCATCATCAGAGA GTCG CTG CAAC CTCATCAGAGATTTC 44 8 ruvC 1911012 .. 1911024 - -3.4 -5.35721 ACAGAACAACAAAAA CAAC GAATT GTTG AACAGGTTCCCTCCC 85 347 ruvA NONE SFV_RS10400 1908783 .. 1908821 - -8.8 -3.10474 GATAAGACGCGAACA GTGTCGCATCAGACAC ACTGCCA GTGTCGGATGCGGCGC GAGCGACCAATCCGA 66 42 znuA NONE SFV_RS10380 1904766 .. 1904788 - -10.6 -5.99154 CACCAAATAAAAAAA GCCGGTAC TGACTGC GTACCGGC TGCGAATGGATGTTA 100 42 SFV_RS10375 1903585 .. 1903625 - -9 -2.56475 TAACGGTAGAGTAAG TACGTTGCCGGATGCGGCG AAAA CGCCACATCCGGCCT-ATA GTTCAATGATAGTTC 66 114 SFV_RS10360 1899227 .. 1899252 - -11.2 -5.80364 AGTGTAATAAAAAAA GCCTCGTG-GG TGAAT CCGCACGAGGC CTGAAAGTGTAAAAA 100 105 SFV_RS10355 NONE SFV_RS10350 1896578 .. 1896598 - -15.5 -4.90296 AAAACGCTACAAAAA TGCCCGATC CTA GATCGGGCA TTTTGACTTTTACAG 100 35 SFV_RS10340 NONE SFV_RS10335 1894479 .. 1894490 - -3.6 -3.35679 TTCTGGGACGGACAA GGCA CTCG CGCC GCATCCGCCAACGGT 48 62 SFV_RS10325 1893535 .. 1893549 - -10 -2.91582 CAGGCTATCCAGAGA GCGGAA TTA TTCCGC CAAAGTGCGTTTTTG 72 17 SFV_RS10320 1890916 .. 1890937 - -4.4 -3.78953 ATTTGCACTATGAAA CTGGCC CGTCGTTTGT GGCCAG GGCTCAAGTACAGCA 58 360 SFV_RS10300 NONE SFV_RS10295 NONE SFV_RS10290 1887792 .. 1887821 - -5.1 -4.70879 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTTATTGGAAA 73 62 SFV_RS10285 1887604 .. 1887630 - -11 -5.69379 ATACAATTAAAAAAA GACCGAATAC GATTCCT GTATTCGGTC CAGGGAAATGGCTCT 100 82 SFV_RS10235 1880492 .. 1880505 - -6.7 -2.80195 ATGTATCAGCAAGTA GTGCT AAAC AGCAC CTTTATACTTCAGCC 55 15 SFV_RS10230 1880140 .. 1880158 - -2.4 -3.21726 GCGCACAACACGTAA CTGAAACA GAG TGCTTCAT AAGTTTCCCTCTAAC 44 148 SFV_RS10225 1878506 .. 1878533 - -14.2 -2.74525 CTAAATCAGACATCA CTGGCGTTATCC ACAA GGGTAACGCCAG TTCCCATCACATCAA 87 37 SFV_RS10215 NONE SFV_RS10210 1875681 .. 1875698 - -12.7 -3.47751 TTCAATAACTGACAA GGCCCGA GTTA TCGGGCC TATTTTTTACTTACT 93 493 SFV_RS10175 1870501 .. 1870513 - -9.1 -3.66095 AAACGGCGACGGAAA CGCTG ACA CAGCG TGAGCTGGTCGCGAG 73 514 SFV_RS10160 NONE SFV_RS10155 NONE SFV_RS10150 NONE SFV_RS10145 1866130 .. 1866169 - -3.4 -4.75372 ATTACTGAGCAAAAA CGGCTGGAGGAGCAGC-TG GAA CATGCTGCTCACCATGACG CGATGACCGGATTAC 71 510 zntB 1863954 .. 1863973 - -10 -5.85178 AACAGGCAAAAAAAA GCCGACTC ATCA AAGTCGGC GTCGTACGAATCAAT 100 215 SFV_RS10130 NONE SFV_RS10125 1862246 .. 1862260 - -7.1 -3.30243 ATGGAGGCCGGATAA GACGC GGCCA GCGTC GCATCTGGCAATCCC 63 83 SFV_RS10100 1854949 .. 1854959 - -6.8 -3.29727 TTTAATGAATTAATA GCTG CCA CAGC TCCCGGCGGCAAGTG 61 9 SFV_RS10060 1849279 .. 1849301 - -14.9 -2.74012 GGATTATCTGAATCA GCTCCCCTG GATTG CAGGGGAGC TGCAAGATTAAACCA 89 33 SFV_RS10055 NONE SFV_RS10045 NONE SFV_RS10040 1845135 .. 1845151 - -2.2 -3.66908 GCTTGCTAAAATTAA CAACGC GAAAA GTGTTG CCAGAGATTTTTCCA 49 44 SFV_RS10035 NONE SFV_RS10030 NONE SFV_RS10025 1841671 .. 1841690 - -4.2 -3.62046 CTATCGTTTTAATAA CCGGGATG AAGC CATCTCAG TAATACGGGAATACA 53 179 SFV_RS10010 1839852 .. 1839866 - -3.4 -4.18494 CAGTCTGACGCAAAA GCAGCC ATC GACAGC ATTGTTGCTGCATAA 60 94 SFV_RS10000 1835165 .. 1835182 - -3.4 -3.96298 GATTTATTAAGCAAA TAGCAG GGTTAA CCGCTA ATCTGCTCCATCGCC 55 16 SFV_RS09990 1833241 .. 1833262 - -3 -3.18199 CAATTTTTAACGTAA CGA-GCGAC TTTCC ATCGCCTCG ATGAGCACCGCATCA 45 103 SFV_RS09985 1831448 .. 1831460 - -6.9 -3.00017 CGCAAACGGAAATTA CCGCC GTG GGCGA TTTACAACTGGTGAA 56 161 SFV_RS09975 NONE SFV_RS09970 1829044 .. 1829076 - -10.7 -4.55128 AGCCTGAAATTAAAA GGTCTGACTCCAA ATGAATA TCGGAATCAGACC TATATGCCTCGTGTT 93 365 SFV_RS09960 NONE SFV_RS09955 1827341 .. 1827357 - -3.7 -4.92363 AAACATGGAGAAAAA GGTTTAA TTC CCAAACC TAAAGGCGTTAGTGC 76 332 SFV_RS09945 1824982 .. 1825011 - -5.6 -4.07568 TCTGGCGCTGTAAAA GACGACCTGCGT CATGCC ACGCTGGTGGCC CTGCCTGTTCCGGGA 65 183 SFV_RS09935 1822533 .. 1822545 - -2.7 -3.74762 AATATTTATTAATAA TCCAA TTG TTGAA CTGAGAGAATATGCA 52 128 mdoD 1820732 .. 1820755 - -14.6 -2.90075 TCGTGTTTAACCAGA CGGCACCTCC CGAA GAAGGTGCCG AAGAAAAAACGATTA 90 38 SFV_RS09920 1820377 .. 1820393 - -10.8 -5.00616 GCTGTTGTTAAAAAA GCCGCC TGGCT GGCGGC TTAGGAAAGTTTACA 100 36 SFV_RS09915 1819379 .. 1819391 - -3.3 -3.05596 TATGCTTTTATTGAA CATCG CGC CGAAG TTTTTGATTTTGCCA 43 439 SFV_RS09905 NONE SFV_RS09900 NONE SFV_RS09895 1816125 .. 1816144 - -13.6 -4.85599 CGCACCGGATAAAAA GCGCCATC TAAC GATGGCGC GTCTGGAACTACTTT 100 34 SFV_RS24495 1815657 .. 1815667 - -4.6 -5.04249 CTGTGAAAAAAGAAA CCGA TAT CCGG CGTGGAAGGCATTGT 81 272 SFV_RS09885 1814369 .. 1814384 - -5.4 -3.53188 GACAGTGAGAAAAAC GGCGAT GCAA ATCACC TGGAGAGGGATGTAT 56 324 SFV_RS09865 1812495 .. 1812525 - -2.6 -3.4331 AGTTTGAGGAAAAAC GGTGCGCGTTCAGA GTGCA TC-GAACGCTC-CC AGACGTTTCACGAAC 48 4 SFV_RS09860 NONE SFV_RS09855 1810236 .. 1810267 - -8 -4.32482 ACTCAGAACCTAAAA CGATAGTGGCCGTC CTAT AACAGCCACTAACA TCTAACTTAATGTTT 79 32 SFV_RS09850 NONE SFV_RS09845 1808592 .. 1808610 - -3.1 -4.75472 GCCATATGAATAAAA CGCGCGCA AATA TGCGC-CA TTTTTTGACGTGCAT 69 137 SFV_RS09840 NONE SFV_RS09835 1807683 .. 1807697 - -4.9 -3.32844 TCTGGTAGTCCAGAA CACGC TGATG GCGCG CATCACCCAGACCTC 51 399 SFV_RS09820 NONE SFV_RS09815 NONE SFV_RS09810 1804473 .. 1804501 - -14.9 -3.96452 TAATTAAAACTGAAA TTCAGCTTTAATT ATT AATTAAAGCTGAA AATAAGCTTTTTGCC 100 11 SFV_RS09805 1803218 .. 1803233 - -5.4 -3.53188 GACAGTGAGAAAAAC GGCGAT GCAA ATCACC TGGAGAGGGATGTAT 56 452 SFV_RS09750 1790343 .. 1790371 - -11.7 -4.07687 ACGTCGTGGTTAAAA TAATTGCCGGGTC TAC GGCCCGGCAGTTA ATCAGATAAATTCCG 93 197 SFV_RS09740 NONE SFV_RS09735 NONE SFV_RS09730 NONE SFV_RS09725 1784414 .. 1784433 - -6.4 -5.4833 TTACGCAATAAAAAA TGGCACCT TATA AAGCGCCA TTTGAAACTGATGAC 100 229 SFV_RS09705 NONE SFV_RS09700 1779590 .. 1779617 - -11.3 -3.67558 TAGAGATGCTAACAA CGCATCAGGCA TTCACG CGCCTGACGCG TCATCCGGCAATGCT 87 41 SFV_RS09590 1756784 .. 1756799 - -5.4 -5.40072 GGTGCGGTAAAAAAA GCCTCTG CGC CAG-GGC AAATCTCGGTAAATG 91 160 SFV_RS09540 NONE SFV_RS09535 1745040 .. 1745071 - -12.4 -3.31726 CGCTTTTAGACAAGA CCTGCACAGTATAC CACC GTTTACTGTGCAGA TAATGACCAAAAGCA 90 70 SFV_RS09530 1744573 .. 1744603 - -17 -5.05116 TCAGAAATAAGAAAA CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG TTTCTACCCCATCCG 100 250 sufA NONE SFV_RS09520 NONE sufC 1741638 .. 1741663 - -3.3 -3.92542 TTCAGCTTCAAACAA GTGATGCCACTG TTG CAGC-GCATTAC TGCTGTTCGGTAAGC 55 22 SFV_RS09510 NONE SFV_RS09505 NONE SFV_RS09500 1738718 .. 1738736 - -3.9 -3.60627 GCAGGTCAGTGTAAA CATTGACC ATCC GG-CAATG TGAGCCAACCGGATG 53 58 SFV_RS09495 1737575 .. 1737593 - -14.6 -4.74103 CTGTGAAGTGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGTCTGCTA 100 48 SFV_RS09475 1734018 .. 1734046 - -14 -3.4945 ACTGAAGCAAGAATA TCAGGATGAAGC TTACC GCCTCATCCTGA ATGGTCATTTTACCA 100 30 SFV_RS09470 NONE SFV_RS09465 NONE SFV_RS09460 NONE SFV_RS09455 1730193 .. 1730209 - -5.2 -3.54129 GACATCTCCCTGAAA TTTCAG GGGTT CTGAAA CTGCTCTACCTCGAA 56 11 SFV_RS09450 NONE SFV_RS09445 NONE SFV_RS09440 1727657 .. 1727674 - -4.9 -4.62002 AGCAATTACAGAAAA CAGGGGAT GAA ATCCC-TG ATGTTGGCGAAGATT 72 231 SFV_RS09415 1723973 .. 1723996 - -13.9 -3.96841 CGCTAATAAAGACAA GGCGCAACC TTCACG GGTTGCGCC TGTGTTTTTACGCAG 100 33 SFV_RS09405 1721696 .. 1721710 - -4.2 -3.53224 GAGTCGCTCGCTAAA GGCTAT TCT ATCGCC CCCTCTTCGGGGGCG 52 49 SFV_RS09390 1717502 .. 1717514 - -10.5 -3.06796 CGTTATCTGATTGAA CGCGG TCA CCGCG AAATCGGCGTCATCC 72 510 SFV_RS09380 1716506 .. 1716540 - -3 -4.96276 ACAAAAAAATGAAAA TAACAAAAAGAGAAAA CAC TTTTGCCATTTTGCTA ACAAACAGGAAGGAG 70 74 SFV_RS09375 1715215 .. 1715248 - -8.1 -3.14564 GCACGTTGTCAGCAA CTGTAACGCAGAAGG TTAT CCTTCTGCGTTTTTG TTTAATTAGCTGTTA 64 31 SFV_RS09360 1712848 .. 1712875 - -12.1 -3.01918 GCACCGGATAAAGGA CTAACGGATGC CCGTTC GCATCCGTCAG TATTGCAGGACGGAT 81 40 SFV_RS09350 NONE SFV_RS09345 1710719 .. 1710739 - -9 -3.42283 CAAGCCACGCAAACA CGCCACTA TACAC CAGTGGCG CTCTCCGCCAACGAT 71 417 SFV_RS09315 NONE SFV_RS09310 NONE SFV_RS09305 1701581 .. 1701604 - -10.2 -2.52516 CCCGTCATCATCAAC CTGCCGCCCG TGAG CTGGCGGCAA TTGTCTGGCGGCTGT 65 97 SFV_RS09285 1697890 .. 1697925 - -11.8 -3.90744 CTCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT 93 32 anmK 1696019 .. 1696032 - -2.4 -3.9328 ACGATAAGAAAAAAT TCAG TTAATT CTGA TATCACGAGTTGGCG 53 28 SFV_RS09270 NONE SFV_RS09265 NONE SFV_RS09260 NONE SFV_RS09255 1693538 .. 1693550 - -3.4 -3.77196 GTACCAGCGATTAAA GCAA GATTT TTGC ATCTTTTCAGGGTGC 53 32 SFV_RS09250 1692113 .. 1692140 - -14.2 -3.49419 TCCCTGTATAAAAAC CAGGGGGAGTGA TTTC TCACTCCCCCTT TCCACTTAATGCATT 100 39 SFV_RS09245 1690863 .. 1690873 - -5.4 -4.36914 TTTCCCGCTATAAAA CCAT CGA ATGG CTGAATTACATCGCC 70 384 SFV_RS09175 1679512 .. 1679536 - -17.3 -5.1963 GCGAAGTAACAAAAA TGGATGGTGCA AAT TGCACCATCCA TTTTTCACGCAAGGC 100 30 SFV_RS09155 1674345 .. 1674361 - -5.1 -5.3104 TCAGTAAAAATAAAA GGCAC CGCCTGT GTGCC ACATTTTTTATCATT 82 87 SFV_RS09150 NONE SFV_RS09145 1672735 .. 1672764 - -2.8 -3.9122 TATCCCGGTAAACAA CACATACG-ACCG TTTAC CGGTTCGTTAGTG TATTAATTGAGCTCC 54 204 SFV_RS09140 1671910 .. 1671936 - -8.7 -3.87318 AATTACGATATGAAA CGCGGGCACAGT TATC ACCA-GCCCGCG AAATGAGAGGATCAG 76 37 SFV_RS09135 NONE SFV_RS09130 NONE SFV_RS09125 1666862 .. 1666885 - -11 -4.1196 AATTCACGGCCAAAA CGCCGGAG AATTTTCA CTCCGGCG TTTTCATCTGAAAAC 86 308 SFV_RS09110 1662197 .. 1662212 - -11.8 -5.47218 TGCCATGTAAAAAAA CCGCCC CGAA GGGCGG CTCTGTTTATTTCAC 100 32 fumC 1660583 .. 1660612 - -4.3 -3.55444 TGGTGAGTTGTTAAA TTACGATGCCG-AC AAT GTGCAGCACCGTTA TAAACCTCAGGCGCA 53 86 SFV_RS09080 1655357 .. 1655377 - -8.3 -4.06419 CCTGGCGAGAAAGAA GTGATCGAC CTG GTCGATTAC TTACTTACCAGTTGC 77 88 pntA NONE pntB 1648689 .. 1648714 - -13.3 -3.69068 CGATCTCAATAAAGA GTGACGGCCTC CGCA GAGGCCGTCAG GGTTACAGAGCTTTC 100 28 SFV_RS09045 NONE SFV_RS09040 1646536 .. 1646559 - -15.3 -3.65722 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TCTTCATCAGGCAAG 100 32 SFV_RS09015 1642449 .. 1642461 - -2 -2.63596 CCTCACCTGAGAGCA TTCA GCAGA TGAA TACGAAAGTTACGCG 39 0 SFV_RS09010 1641004 .. 1641024 - -3.3 -3.16345 AACTAGGAAAATAAT TAACCTTGA AAG TCTAAGTTA TGCTTTCCTGGCCCA 46 82 SFV_RS09005 1640193 .. 1640217 - -15.8 -2.93585 TGATATGTGAAATGA CCGGGGAGTA TCAGC TACTCCCCGG TTTATTGATTGCCTG 95 69 SFV_RS08970 1632702 .. 1632722 - -4.5 -3.91674 TTCACAGATAAAACA CTCTCCAGG AAA CCCGGGGCG GTTCACAGGGACGCT 59 28 SFV_RS08945 1630006 .. 1630020 - -4.2 -3.53444 GGAGTGTCCGTTAAA CTCAGG CTA CCTCAG GACTGAGAGTCGCCA 52 25 SFV_RS08940 NONE SFV_RS08935 1628634 .. 1628651 - -10.5 -5.76949 GACGGCGAAAAAAAA CCGCCAG TAAA CCGGCGG TGAATGCTTGCATGG 100 173 SFV_RS08920 1625775 .. 1625787 - -7.7 -2.59881 CAGCTAGTTGATAAC GTGAC AAC GTCAC TGAGGCAATCATGAA 59 285 SFV_RS08900 1624034 .. 1624047 - -9.5 -3.6707 ACGCAATAGTTGAAA GGCCC ATTC GGGCC TTTTTTAATGGTACG 77 30 SFV_RS08875 NONE SFV_RS08870 1618901 .. 1618923 - -6.2 -2.72379 TCAATTGTTCAAGGA CGGCGATACC CGC AATTTCGCCG GTAGTCCCACCCGCC 53 18 SFV_RS08865 1618379 .. 1618391 - -3.4 -3.48593 TATCTGTCCATACAA TTGC GGGTG GCAA TTATCTCAACGTGAT 50 132 SFV_RS08860 1616867 .. 1616883 - -2.3 -2.52896 TCATGGTTTAATCGA GGAAA TACGCCT TTTCC TGGATCATAAAGTGG 39 83 SFV_RS08855 1615228 .. 1615243 - -10.4 -4.58585 TAGTGAAATAAGAAA CCCGGT CGAA ACCGGG TTCAGAAGTAACGGT 89 45 SFV_RS08835 1612373 .. 1612386 - -6.7 -3.03771 TCAGATGCTGGAAGA GCAGT ATCC ACTGC AAGAGAACGGACAGA 56 94 SFV_RS08785 1603069 .. 1603085 - -2.2 -4.05033 CTTACGCCAGAGAAA TAGCTG GCTGG CTGCTA CACCATGTTGCCGGT 55 255 SFV_RS08780 NONE SFV_RS08775 1601831 .. 1601853 - -5.5 -4.15222 ACGTGTCGGAATAAA GGCTCAGGT CGGAT ACCGAAGCC CGCGGGCACGTAAAG 65 150 SFV_RS08755 NONE SFV_RS08750 1598331 .. 1598346 - -4.6 -4.36411 GATGAAGGAGTAAAA CCCGCC GTCG AACGGG TTTACACCATCAAAA 67 63 SFV_RS08740 1597219 .. 1597241 - -12 -2.74144 GTTGTATGTTCAAAT CGCCGGATGT GTC ATATCCGGCG TTCAGTCGATAATGT 79 42 SFV_RS24485 NONE SFV_RS24480 1595240 .. 1595289 - -2.1 -3.86431 AATAATATAACATAA CAGATAGGGGCTTTATGTCTATGA CTT CCGCAGACCTGAAGTCCCT-CCTG ACTCTGGTCTATAAA 53 384 SFV_RS08705 1592491 .. 1592522 - -15.8 -3.31691 TATAAACACCACCAA TGGCTGGCCTGGAG ATAT CGCCAGGCCAGCCT GGTTATAGCAGTAAT 100 28 SFV_RS08695 1589526 .. 1589543 - -10.5 -3.8591 TGTGACAAGCAATAA CCCGGCA GTTA CGCCGGG TATAAAAATTACTGA 80 34 SFV_RS08690 1588744 .. 1588769 - -11.9 -3.04517 AGGCGGGGGGAAAAG CCTCTCATCCC GGAT GGGATGAGAGT AAATGAATTACTCTT 81 33 SFV_RS08685 1588366 .. 1588389 - -11.8 -5.63103 CGTGAAGTAAAAAAA GCAATGCCGCC ATC GGCGGCATT-C ACACACTTAGTTCAT 100 32 SFV_RS08670 NONE SFV_RS08665 NONE SFV_RS08660 NONE SFV_RS08655 1583678 .. 1583691 - -2.4 -2.9732 TGTCAACGCAAAGCA GAAG TGTCAC CTTC GGTGCGAAACAGAGA 41 55 SFV_RS08650 1583410 .. 1583423 - -9.5 -5.77734 AAATAAAAACAAAAA CCCGC CGAA GCGGG TTAAGTGCGGGTGCG 100 96 SFV_RS08645 NONE SFV_RS08640 NONE SFV_RS08635 NONE SFV_RS08630 NONE SFV_RS08625 1580325 .. 1580340 - -7.5 -5.4505 TTTCGCAATAAAAAA CCCGC TCAGCG GCGGG TTGTAGAAACTCTTC 95 108 SFV_RS08620 1580109 .. 1580129 - -3.9 -3.07947 TAACAACGCTGAATA CCGATAATG GAC CGCCATCGG GGACCCGCCCCCCGC 47 100 SFV_RS08615 1579967 .. 1579977 - -6.8 -2.63549 TATTTTCAACAATAT CCTG AGC CAGG TATATTTCAGTATAA 55 74 SFV_RS08610 NONE SFV_RS24475 1579149 .. 1579170 - -15.9 -4.3341 CAAAATCAATATAAA CAGCCCCTC CGGA GAGGGGCTG GAGAGTGGCGCTATG 100 164 SFV_RS08595 1578065 .. 1578087 - -9.9 -5.68489 GACAACAATAAAAAA GCCACCAGT TAACT ACTGATGGC TCTGATAACTCATGC 100 269 SFV_RS08590 1577330 .. 1577352 - -7.7 -3.81951 TCCTACAGCACCAAA TCAGGTCTG GGTGG CGGACCTGA CGTATGTTGCCACAC 69 517 SFV_RS08570 1575282 .. 1575302 - -4.9 -3.33151 GTGTTTAAATTAACA TATTTTTCA ATA TAAAAAATA AGACTCTGGCTTCAA 54 144 SFV_RS08565 1572764 .. 1572794 - -12.8 -3.28537 ATAGTCAATGAGGAA TTCTTCTGCTGT GCGGATG ACAGCAGAAGAA ATGAGAAGAGGCATT 90 39 SFV_RS08560 1572305 .. 1572320 - -2.6 -4.08767 TTTATCTCCTTAAAA CAATAA AGTT TTATCG ATACCTTTTAAACAT 56 62 SFV_RS08555 1571458 .. 1571480 - -8.4 -2.53831 CGCCTAAAAACAACG CGGGGCAG GGAATGG CTGCCCCA TATAATTCTTACGTA 63 73 SFV_RS24470 1570453 .. 1570472 - -5.7 -3.16191 TGATATGGCCATGAA TGGCGTCG GATGT CG-CGCCA GTGCACGCATTATGG 52 512 SFV_RS08530 NONE fixB NONE SFV_RS08520 NONE SFV_RS08515 1566019 .. 1566044 - -11.2 -3.81755 ACTCTCGAAACAGAA CATCAGGCCCG AGTTG CGGGCCTG-TG GGATGCATGATTAGC 91 36 SFV_RS08510 1564302 .. 1564328 - -10.7 -5.02645 AAGAAATAAAATAAA TCCCCGGCGGC GTTCA GTCGCCGGGGT TATGTGATCCCCGAA 100 49 SFV_RS08495 1560736 .. 1560763 - -7.8 -5.33131 TAACAAAAAAACAAA CCAATGCACTAG TTCT CTAGTACATTCG GCGACTAAGGCCCAT 95 14 SFV_RS08490 1559520 .. 1559543 - -13.2 -3.86822 CAAGTTGCGCAGAAA TGCCCATCCC ATCA GGAATGGGCA CGTATTCAGAAGCGG 100 31 SFV_RS08485 1558814 .. 1558849 - -5.4 -3.64164 GCAAAAAGAGGATAA CGCGCTA-CTGAATGAA TTA TTCAGTCTGATGGCGCG AGAGCGCAGCGATTA 58 402 SFV_RS08470 1555465 .. 1555492 - -12.8 -3.80855 CCCCTGAAAAAGTAA TGCCAGTCAGTT AAGC AACTGACTGGCT CTTTTTCGGGGCTGT 100 8 SFV_RS08405 NONE SFV_RS08400 NONE SFV_RS08395 NONE SFV_RS08390 1542129 .. 1542141 - -9.1 -3.67141 ACAATGCCAGTGAAA CCCAG CCG CTGGG CTATGCCTCCGGGGC 73 316 SFV_RS08380 NONE SFV_RS08375 NONE SFV_RS08370 1539014 .. 1539030 - -10.8 -4.43477 TTTATTTAATCAAAA GGCCGC ACGGA GCGGCC ATTATCCTCAACCCA 90 43 SFV_RS08360 1537625 .. 1537652 - -19.2 -4.16301 AATTCAGATAAAGAA CCAGGGGCAGCG TGAT CACTGCCCCTGG TCATTAACCGAGAAG 100 29 SFV_RS08355 1536866 .. 1536882 - -5.2 -3.70902 GCTCTTATATTCAAA TGGAAT TGCTT ATTCCA GAAAGGTGATTTTTG 57 46 SFV_RS08350 1535338 .. 1535368 - -10.4 -4.33653 CATTTAAAAAGTAAA GCAACGGCCCCTAT ACA AAACGGACCGTTGC CAGCATAAGAATTAA 87 37 katE 1531536 .. 1531574 - -10.5 -2.60723 TGATGTGTAAGTAAG GTGG-TAAGGTCAC-TCCC CAG GGGACGTGACCTTATCCAT ATTTACGCCGGAATT 70 28 nadE 1524558 .. 1524585 - -12 -2.77895 TGTAGGTCGAATAAG GCGTTCACGCCG CATC CGGCGTGAACAA ATTACTCTTTTTCGC 73 63 SFV_RS08285 1523018 .. 1523063 - -2.5 -3.53761 GAATCTGTGGCGAAA CGCTGCCGGT-GAAACGCGCGA AAT TTGCACTTTCCCACCGGCAAAA CGTGATTTTTACTGG 47 468 SFV_RS08245 1514675 .. 1514691 - -6.5 -2.80816 GTTTGAGCCAGGAGA GCTGCTA AAT TAGCGGC GGAAGGTCGCCCAGA 53 18 SFV_RS08240 NONE SFV_RS08235 NONE SFV_RS08230 NONE SFV_RS08225 NONE SFV_RS08220 1511489 .. 1511514 - -16.3 -3.90762 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCTTTTAAGG 100 27 SFV_RS08210 NONE SFV_RS08205 NONE SFV_RS08200 1507128 .. 1507141 - -2.3 -2.70788 GCATTGAGAAAAACT TTGCG TTAT CGCAG TTTGTTGTAATTTTC 40 17 SFV_RS08195 1506529 .. 1506547 - -5.2 -3.80625 GGCTGATAAGGTAAA GCTTAGGA GCG CCCTAGGC CGCTTCAATGACTTT 59 20 SFV_RS08190 1505517 .. 1505529 - -2.7 -4.26076 GCACTGGCAGCAAAA CATCA GAT TGATA ACCCCGGTTATGCAC 60 255 SFV_RS08180 1504551 .. 1504576 - -7.5 -2.66272 GTGGAGGTAAACGTA CCGCCAGAAGT GTTC AGTTCAGGCGG GCAGTCAGCGCAGCC 56 148 SFV_RS08170 1502729 .. 1502744 - -3.2 -4.30719 TTGGCCCATAAGAAA TGTTCC CTGG GGAGCA TCATCCGTTAAATAC 62 163 SFV_RS08125 NONE SFV_RS08120 1495090 .. 1495114 - -11.4 -4.64763 CGAGGTAAAAAATAA TGTGGCCGAC GATCT GTCGGCCACT CAGTACAAGACTTAA 100 37 ansA NONE SFV_RS08110 NONE SFV_RS08040 1481242 .. 1481259 - -11.3 -5.82316 ATCAGGTAAAAAAAA GAGCGAC CGAA GTCGCTC TTTTTAGATCACAGT 100 52 SFV_RS08035 1480322 .. 1480333 - -4.4 -3.57507 ATTAACGCAAATTAA CGTT TGGC AACG CGAATGGATTGCGCC 55 10 SFV_RS08010 NONE SFV_RS08005 1476336 .. 1476358 - -7.7 -3.81951 TCCTACAGCACCAAA TCAGGTCTG GGTGG CGGACCTGA CGTATGTTGCCACAC 69 489 SFV_RS07990 1475001 .. 1475016 - -4.6 -4.7373 GTACTCCATCAAAAA TCAGCC CAGC GGCGGA AAATACCGCCGCCGA 71 46 SFV_RS07985 1473965 .. 1474015 - -12.5 -4.26344 ATATCCGCAGTAAAA TCTTCCGAAGCCGGACTGGGCGC GCTCA GCGCCACATCCGGCTTTGGCAAA CTACAAATCCAACAC 100 26 SFV_RS07955 1466717 .. 1466727 - -4 -3.06515 TCTTATCCTTAAAAT TAAC CAT GTTA TCGATAAGGCTATAT 47 413 SFV_RS07950 1466340 .. 1466370 - -11.3 -4.84359 TGATTGTGAGAAAAA GGACGCTTTTTAT ATGTG ATTAAAAGCGTCC TGACCCATTTATGCT 100 55 pabB NONE SFV_RS07935 1463919 .. 1463938 - -6.4 -2.58427 AATACTCCTGACAAG GTGACTGG ACTT CCAGTAAC GAACTAATAACAGCG 53 171 SFV_RS07930 1462500 .. 1462526 - -13 -3.88583 GAAAGCGGGTATAAA TTCGCCCATCCG TTG CAGATGGGCGAG TAAGAAGTATTAGTC 100 35 SFV_RS07925 1460805 .. 1460817 - -6.3 -2.567 ATGAAGATGAGTAAG CGTTA ACG TAACG ACATAATGGGCGTGA 53 15 SFV_RS07910 NONE SFV_RS07905 NONE SFV_RS07900 1456058 .. 1456075 - -14.1 -5.71712 CTCCAGATAAAAAAA CGGGGCC AAAA GGCCCCG GTAGTGTACGACAGT 100 42 SFV_RS07895 NONE SFV_RS07890 NONE SFV_RS24465 1454740 .. 1454791 - -9.8 -3.42364 AGGGAAGAGATAATA TAGCCTAAGCTATGTCTGAT-TATT AAA AATACACTAAACATAGCTTTGGCTA AATTCATAAGTTATT 75 72 SFV_RS07875 1453369 .. 1453390 - -4.3 -4.43501 AAGGTAGCGATAAAA GCGG-CGGCG AAA CGCTATCCGC AGGTCACTCTTTGTG 67 441 SFV_RS07855 1452084 .. 1452101 - -9.9 -2.65354 CTTATTTTAAATTTA CAATCCC TTTG GGGATTG ACTTCTCTTTAGGGT 68 225 SFV_RS07840 1450763 .. 1450793 - -6.9 -3.29471 TTCTGATGAGAGTAA GAACCTGTCGG AATATCAAA CAGACAGGTTC TTTATTTAGCATGAG 61 128 SFV_RS07830 1448387 .. 1448406 - -10.7 -4.946 AGTAAATACTAAAAA GCGCGTC CTGATC GACGCGC TTTTTTTATGCCCTG 100 31 SFV_RS07805 NONE SFV_RS07800 1439885 .. 1439910 - -14.7 -2.64747 GCAGTTTAGCATAAG CGCTCCGGCGC AGGC ACGCCGGAGCA GTGGGCATTATTTGG 89 33 yebU 1438380 .. 1438396 - -2.2 -2.63208 TGCCAGTCAAAAAGT GCGC TTTTTTTGT GCGC TGTCATGCGTTACTG 39 28 SFV_RS07790 1438017 .. 1438033 - -7.9 -4.12857 AACCAGGACAAATAA CCCGCCA TGC CGACGGG TTCTTTTTGGATCAG 74 37 SFV_RS07785 1437363 .. 1437382 - -4.2 -3.62046 CTATCGTTTTAATAA CCGGGATG AAGC CATCTCAG TAATACGGGAATACA 53 392 SFV_RS07760 1433352 .. 1433363 - -5.8 -3.76373 GGCTGAACAGGGAAA CGGA TGAA TCCG GGGAGGCCCGGGGGC 63 91 SFV_RS07715 1427530 .. 1427545 - -7.6 -4.4522 CAAAATTAGAACAAA CATAGC AACG GCTATG TTTTATAGCATAACC 80 425 SFV_RS07710 NONE SFV_RS07705 NONE SFV_RS07700 NONE SFV_RS07695 1423851 .. 1423883 - -8.4 -2.89509 GTGGAATAACAGAAG CTGCGGCACG-TCGT ATGC AGGAACGTGCCGCGG TTGGCTGGTAAACTT 65 187 SFV_RS07615 NONE SFV_RS07610 1413265 .. 1413278 - -9.5 -3.73775 CGCACCCGCACTAAA CCCGC TTCG GCGGG TTTTTTGTTGCGTGC 79 447 SFV_RS07595 1412669 .. 1412701 - -16.5 -4.15044 GTTGGGGTTAACAAA CAAAAACCCCGGA TTGATGG TCCGGGGTTTTTG AAGGAAACAAAACAG 100 187 SFV_RS07550 NONE SFV_RS07545 1406787 .. 1406811 - -8 -3.19018 AACAGCCCAATGGAA CGCTTCTTCAG GAGT CTGAAGAA-CG AATGGATGCCGGTGG 61 440 SFV_RS07525 NONE SFV_RS07520 1404080 .. 1404093 - -2.3 -2.58663 AGCGATCTGCAGAAC CTCCC ATCC GGGAC AATACGTATTACTAC 38 221 SFV_RS07510 NONE SFV_RS07505 1402394 .. 1402408 - -7.8 -3.23274 TGCTTGACAACTTAA TAGGGG CAC CCCCCA CACACACCCAGCACG 64 7 SFV_RS07495 1400357 .. 1400368 - -3 -3.22102 ACATTTTTCATAATA TTTC TCAT GAAA CTTATCCCAGATGGG 45 27 SFV_RS07490 1399670 .. 1399694 - -11.5 -4.22591 AATAAGTTTAATAAA TCGTACTGAAC ATA GTACAGTACGA TGGTATCTATATAAT 93 45 SFV_RS07485 1398364 .. 1398388 - -4.1 -3.62597 GCGATGCTTGAACAA CCGCTTCCTGC GCA GGACGATGCGG CGCTGGAGAATTTTA 53 332 tpx 1397087 .. 1397131 - -13.7 -3.4382 AAGAACGAAGAGTAA GCGCGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTT ATGCTTTCAGTACAG 100 24 SFV_RS07455 1391729 .. 1391770 - -12.3 -3.92373 TATCCGATCTATAAA TGTAGGCCGGATAAGATGC GCCA GCATCGCATCCGGCATTCA GGCAAGGTAGCTGGT 100 43 pspF 1374747 .. 1374765 - -2.3 -4.54047 CGATTGCACAGAAAA TCCAGCA ACGCG CGCTGGC GCAGGGGCTGCTCCT 63 272 SFV_RS07315 1367678 .. 1367689 - -7.2 -4.0031 AGGCCGATGAAACAA CCCC GCAA GGGG AATTACGCGTTTTTC 70 28 SFV_RS07310 1365954 .. 1365995 - -16 -3.12351 TCTTTTTATAGTTAA TGGCGCGGCGCGTTACCCT CAGGC AGGATAATGCGCCGCG-CA TCCGGCTATTACGTT 100 34 SFV_RS07305 1365594 .. 1365605 - -2.2 -3.31144 GCTTTATCCGGACAA CGAT ACTG ACCG ATCGTCTGCAATTAA 45 45 SFV_RS07300 1365359 .. 1365370 - -2.2 -3.20348 CTTACTAATATTTAA TGAC ATTT GCCA TTACCGTTTGTGTTC 44 10 SFV_RS07295 NONE SFV_RS07290 NONE SFV_RS07285 NONE SFV_RS07280 NONE SFV_RS07275 NONE SFV_RS07270 NONE SFV_RS07265 1359337 .. 1359347 - -3.2 -2.64595 AACGGTTATTATAAT CAAC CTG GCTG TGAGTAGCTATAGTT 42 88 SFV_RS07260 1358414 .. 1358434 - -12.5 -3.71149 GTATAACAGAGATAA CGGGCGGCA GAA CGCCGCCCA TCTTTACCAACAGAA 95 44 SFV_RS07255 1357141 .. 1357174 - -5.2 -2.78816 TTAGTGGCCATTAGA GCGGCTGACAGTTT TACGCG AATCTGTCTGACGC GGCAAGGTTAATATG 49 33 SFV_RS07250 1355145 .. 1355169 - -13.6 -4.42062 GAGCGGGGAAATAAA CGGCCCATCC ATGAG GAATGGGCCG TGAAAGGAGATTACG 100 36 SFV_RS24455 1352871 .. 1352901 - -2.7 -4.8143 TGAATAATGCAAAAA TTGCCGCTAAA AGAGAAGTG TTTAACAGCAA CGGCTAATTATCATC 68 96 SFV_RS07225 1352606 .. 1352620 - -3.5 -2.58303 AAATAAAAAAATACT GACGC GCCGG GCATC CTCAAATAGGAAAAC 42 56 SFV_RS07220 1351635 .. 1351648 - -3.8 -2.7263 ATTATTCCGTGAAAT CTGC TCGCGC GCAG GGTTATATCACGCAG 45 189 SFV_RS07215 1351208 .. 1351227 - -13.6 -5.0916 CGGTTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAATATTTTAC 100 123 ribA 1346729 .. 1346763 - -11.6 -2.98947 TTGAAGTAACAAGTA TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA TGAATTACACGATGC 79 48 SFV_RS07170 1343576 .. 1343588 - -3.3 -4.17789 GAACCAGAAACGAAA CGGGA ATG TTCCG TCGTTATTCCAGACG 60 185 SFV_RS07140 1338605 .. 1338624 - -11.4 -4.46775 GATGTAAAAGACAAA CGCGAGGC TAAA ACCTCGCG TTTTGCTTTAATCAA 100 33 SFV_RS07130 NONE SFV_RS07125 NONE SFV_RS07120 1335951 .. 1335971 - -9 -3.02166 CGGTTAATCAAAGTA TGCCGGAC GTCAT ATCCGGCA TTTTTACAGATTAAT 68 36 SFV_RS07100 NONE SFV_RS07095 NONE SFV_RS07090 NONE SFV_RS07085 NONE SFV_RS07080 1326638 .. 1326660 - -11.2 -4.45261 TAAAGAAAGTTAAAA TGCCGCCAGC GGA ACTGGCGGCT GTGGGATTAACTGCG 100 32 SFV_RS07075 1326042 .. 1326063 - -13.7 -2.94144 TCTCCAGTGAAATCA CTGCGAGCC ATAC GGCCCGCAG ATGCAATTATCTTTA 87 69 SFV_RS07070 1325482 .. 1325500 - -2.4 -3.16914 ACGATTCATGAAAAT GTCCTCTT TAT AAAATGAC TAAAAGTTAAAATTC 44 46 SFV_RS07065 1324923 .. 1324945 - -14.2 -4.84017 AATTCCGCACAAAAA CGACCCCGTA ATA TACGGGGTCA ATAAGGACATGGTAT 100 49 SFV_RS07055 NONE SFV_RS07050 1322516 .. 1322550 - -10.8 -4.22948 AAAACCGACTTAAAA GGAAAATCACAGGCGC GAT GCTACTATGATTTTCC TGAGGAGAACAGAGG 88 77 SFV_RS07045 1322067 .. 1322096 - -19.5 -4.08144 TTCAGTAAGCAGAAA GTCAAAAGCCTCC GACC GGAGGCTTTTGAC TATTACTCAACAGGT 100 28 SFV_RS07035 1320631 .. 1320650 - -4.2 -3.62046 CTATCGTTTTAATAA CCGGGATG AAGC CATCTCAG TAATACGGGAATACA 53 183 SFV_RS07020 1317939 .. 1317961 - -12 -2.67958 CAATATCTAAATGTA CTGGGCACCA TTG CGGTGCCCAA TAAGTTTACTCTTCC 79 52 cls NONE SFV_RS07005 1315750 .. 1315769 - -13.6 -4.31587 CTTTAAAAACAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCTAAAA 100 49 SFV_RS06970 1305496 .. 1305527 - -13.9 -4.4017 CCAATGTGCATAAAA GAATCCGGAAACA AGTGAG CGTTTCCGGATTC TTACACAGCCACTGG 100 115 SFV_RS06965 1303710 .. 1303725 - -4 -3.53012 TTTTGTGGCCGTAAA GCAAGCA TGG TGCT-GC GTCTTGATCAAGCAG 51 463 SFV_RS06955 1302198 .. 1302214 - -13.7 -5.55769 CCGGACAATAAAAAA TCCCGCC GCT GGCGGGA TTTTAAGCAAGTGCA 100 53 SFV_RS06935 NONE SFV_RS06930 1297523 .. 1297536 - -3.9 -4.00042 CTGGCGATTAAAGAA TAATC GTCC GATTA CCGTAAACAAAGACG 57 4 SFV_RS06925 1296931 .. 1296946 - -6 -3.00022 TTTAGTTCACATAGA CCCTGC TTCG GCGGGG TTTTTTTATGGGCAC 56 350 SFV_RS06890 NONE SFV_RS06885 1285591 .. 1285634 - -3.8 -3.65812 GGTGGTGGAAGATAA CCAGGGGCAGCGTG-TCTCCT CCA ATGAGATCACGCTAACGCTTG TCGAACCGTTCGATG 53 76 SFV_RS06875 1283314 .. 1283337 - -6 -2.64144 CTTGCACTGAAAGAG GGCGGACGC ACCACAG GCGT-CGCC TATCGACTACCAGAA 50 441 SFV_RS06860 1281214 .. 1281252 - -3.2 -2.59035 ATAAGCAGGAATTTA TCTTATCTCTCCCGAT TTCCGTC ATCGGAGGAGATATAA CTGTCAGGCAAATAT 42 29 SFV_RS06855 1280668 .. 1280695 - -9.8 -5.26155 AGATAAAGACAAAAA TGGCCGCAGG CTGTTACC CCTGCGGCCG GTTTCGGGCGCATAT 100 74 SFV_RS06850 NONE SFV_RS06845 1278696 .. 1278721 - -13.3 -5.4251 GCCAGATACAAAAAA GGCCGCAGG CTGTTACC CCTGCGGCC GGTTTCGGGCGCATA 100 75 lolB NONE SFV_RS06805 1271595 .. 1271609 - -10 -3.62522 CAACGTCTGGAACAA GGTGAC GTT GTCACC GAAACTCAGCTTGCC 78 45 SFV_RS06800 1270499 .. 1270512 - -9.5 -5.76633 TTACAGACAAAAAAA CCCGC CGCA GCGGG TCTTTGAGCCGGGTT 100 44 SFV_RS06795 1268370 .. 1268385 - -3.2 -3.28924 TATTCCCTGTTACAA CCCAGA AAGT TCCGGA GGTGACATATGAAAC 48 367 SFV_RS06785 1267445 .. 1267468 - -9 -2.80499 TAATATCTTAATAAT CAACCTGTTA TTGC TAACAGATTG CAGAAATGGAAATAA 66 89 ychF 1266246 .. 1266263 - -11.3 -4.98531 CGGTGAAATGAAAAA TCCACGC AATT GCGTGGA TTTTATATACTTTTG 100 86 SFV_RS06770 1262518 .. 1262532 - -7.2 -3.44848 GCCGGGTATGAAAGA CAGAAA CGA TTTCTG ATACATCAGAGTGAT 65 106 SFV_RS06760 NONE SFV_RS06755 NONE SFV_RS06750 1257185 .. 1257216 - -7.4 -2.71924 CAGTGCTGGGTAAAT TGCCGGATGACATCA GAA CGATGCCATCCGA-A CGGTGGCTTAACCCT 58 33 treA 1255135 .. 1255146 - -4.4 -5.24129 TCTGTGTAGAAAAAA CCAT AGAT ATGG TGTTATCTGCCGACA 80 86 SFV_RS06730 NONE SFV_RS06725 1251621 .. 1251632 - -2.2 -3.93369 CGAACGGCAAGCAAA GTCA CTGG CGAC CTCCGCGTAACAACA 53 15 SFV_RS06720 NONE SFV_RS06715 1250049 .. 1250064 - -2.5 -2.53268 AGAAAGGAAAATCAT CACAG TGCCTC CTGCG GTACGCTATCCCACC 40 9 SFV_RS06710 NONE SFV_RS06705 1247175 .. 1247204 - -12.9 -2.59668 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG 84 33 SFV_RS06695 1245495 .. 1245505 - -4.6 -4.02253 CCAATAAGCCAGAAA GCCG GTG CAGC CTGGGGCGTCGATCC 62 493 ldcA 1244290 .. 1244311 - -2.2 -4.03234 TGTCTCTTATATAAA CCCTACCA TATTAG CGGCAGAG ACAGCGTTTTACTTA 55 60 cvrA 1242482 .. 1242504 - -3.5 -3.72576 GCTGCGTTCAGTAAA GCATCGCATC CGGC GATA-GATGC TGCATTAAATTTAAG 53 36 SFV_RS06675 1240431 .. 1240453 - -10.7 -2.78816 CCATTGCCCATGATA GTGTCCATT AAAAG AATGGACAC TATTTCCCCGGAACC 74 62 SFV_RS06660 1236053 .. 1236068 - -10.4 -2.67021 CGTTTAAAGAGCAAC CCCCTC AAAC GAGGGG TTTTTTGTTGTTTTT 70 39 nhaB 1233519 .. 1233538 - -13.6 -3.92659 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA 100 36 SFV_RS06645 1232847 .. 1232864 - -12.7 -5.14965 AGCGGCAGGAAAAAA GCGCTCC CGCA GGAGCGC CGAATGGATTAGCGA 100 34 SFV_RS06630 1230216 .. 1230243 - -5.5 -2.74078 ATTAAACCAAATGGA CCGGCGACGACA TCGGC TG-CGGCACCGG CATACGCTTCCTTCC 50 208 SFV_RS06625 1229752 .. 1229792 - -7 -3.28791 AGCGCTCTGTCATAA TGAGAGTTACCCGATA CCTTATTAT CAACAGGTAACTCTCA ATCTTTAAAAAACGT 61 100 SFV_RS06600 1227409 .. 1227438 - -3.6 -3.01712 TGTGGCGGCGTAAGA GGCCC-CG-GAACG TTAT CGTTCACACGGACC GTGGAGGCCAGTACT 46 303 SFV_RS06585 1225870 .. 1225889 - -8 -2.5076 AACTAGTATTAAGAC TATCACTT AAAT AAGTGATA CTGGTTGTCTGGAGA 59 330 SFV_RS06575 NONE SFV_RS06570 1224232 .. 1224242 - -3.2 -3.05844 CCCGTTATCTTAATA TCCG CCA CAGA ATTGCTCTATCATAG 45 385 minC 1223171 .. 1223191 - -3.3 -3.29973 TTAAAAAGGGATCAA TTTAACGGT TGA ACGGTCAAA GCGTTTTCGACTAAC 48 1 SFV_RS06555 1222330 .. 1222346 - -3.7 -3.37464 CGAGTAATGCCATAA CTTATCC TCC GAACAAG CGTTTGAGGAAGCCT 50 10 minE 1222009 .. 1222036 - -11.4 -4.76041 GAGAGGGATGAAAAA CTCAAGGCAGAA ATGA CTCTGCCTTGAA GATAAATGCGTTTTT 100 50 SFV_RS06540 NONE SFV_RS06535 NONE SFV_RS06530 1220050 .. 1220072 - -12 -5.08824 CCGTTAGCTAAAAAA CCGCGTCG TATTCAT CGACGCGG TACATATGAAATATT 100 39 SFV_RS06515 NONE SFV_RS06510 1216440 .. 1216458 - -12.4 -3.81137 TGTTAAATATTTAAA CGGGCGTA TAA CACGCCCG TTGTTTTATTTATGT 100 88 SFV_RS06500 NONE SFV_RS06495 1213836 .. 1213871 - -4 -3.14647 ACTCACGACATTGAA CTTCAAGGCGGCGT-AT TCT ATCACGCAGCCTTTTAG ATGACACCCTTTGTA 48 22 mnmA NONE SFV_RS06485 NONE SFV_RS06480 1210618 .. 1210647 - -12.9 -2.81326 GATAATCTTAATAAG CAG-GCCGGACAGC ATC GCCATCCGGCACTG ATTTGAGGCTTATTT 85 35 SFV_RS06475 NONE SFV_RS06470 1207850 .. 1207864 - -4.2 -4.84761 ACACCGTGACAAAAA GACGGT TTA ACCGTT CATTAAAAATCGACG 71 518 SFV_RS06410 NONE SFV_RS06405 1199965 .. 1199980 - -10.4 -3.04983 CATACAGCACATACA GCCGGA GCAA TCCGGC TTTTTGTTATTTTTT 73 317 SFV_RS06355 1194970 .. 1194990 - -11.8 -5.64274 TCAGGCATAAAAAAA GCGGCCCC GAAAT GGAGCCGC CTTTCTGAACAGATA 100 355 SFV_RS06335 1191614 .. 1191638 - -12.9 -3.18598 GAAGTAAGCGAAAAG GGATGCGGCAT GTG ATGCTGCATCC GGCTTAAATCCAAAC 91 41 SFV_RS06325 NONE potA NONE potB NONE potC NONE potD 1186287 .. 1186308 - -13.7 -5.26875 TTGCTAACTAAAAAA CGGGCGGTA ATAC CACCGCCCG CTTGCTGAATTAACG 100 35 SFV_RS06275 1179891 .. 1179908 - -6.9 -3.30701 GTTTAGCAAATTGAA TCGCCCC GGCT GGGGTGA TGGTTTAACGAGAGT 61 30 SFV_RS06270 1176234 .. 1176245 - -2.2 -4.1822 GGTTATTGTAATAAA CAGA TAAG CCTG AATTATGGATGGTGA 57 119 SFV_RS06265 1174911 .. 1174924 - -2.3 -4.92239 TGAAAAACGTAAAAA CCTCA TCGC TGCGG CGATTTTAAGCTCCA 69 335 SFV_RS06255 1173566 .. 1173589 - -3 -4.17491 AGGAAACGGTTAAAA CACCGCGTCA GGAG TGTCGCAACG TCACAGTGACCCATC 60 458 SFV_RS06210 1165119 .. 1165136 - -12.7 -3.25823 CGTTGGGGAGACTAA GGCAGCC AGAT GGCTGCC TTTTTTACAGGTGTT 86 43 SFV_RS06135 1151736 .. 1151789 - -13.8 -2.57132 GGTTGGCCTGATAAG GCGTTTACGCCGCATCAGGCCGCC TGCACC GATTGCCGGATGCGACGTAACCGC ATCCGGCGCAAACAA 86 41 rne 1146935 .. 1146954 - -11.4 -5.69793 ACATGAAATAAAAAA GCCCTGGC AGTT ACCAGGGC TTGATTACTTTGAGC 100 47 flgA NONE SFV_RS06055 NONE SFV_RS06050 1135212 .. 1135236 - -15.7 -2.6563 CGGTGTAACAATGCA TTCCGGCCTGC AGT GCAGGCCGGAG ATAATATTCAGATCG 93 33 SFV_RS06025 NONE SFV_RS06020 1129195 .. 1129226 - -12.2 -4.55016 AGAAAAAACTGAAAA CGGCGGCAACCCGC GAAT ACAGGCTGCCGCGG CGGGTCAGGATTAAA 100 36 SFV_RS06015 1128521 .. 1128536 - -11.8 -4.91852 TGCACGAAAAATAAA GGGCGC GAAT GCGCCC TCGTCATTAATCCGT 100 32 SFV_RS06010 NONE SFV_RS06005 1127035 .. 1127050 - -6 -5.85244 AAGTAAAATAAAAAA GCCGGG GCGA CCCGGT AAAAACAAAAATCAC 100 47 bssS 1126487 .. 1126503 - -9.4 -3.74347 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT 79 50 solA 1125266 .. 1125285 - -10.7 -4.57837 ATACTCCTGTAAAAA CGGCCTC ATTCTG GAGGCCG TAATGATGATTATTG 93 35 SFV_RS05990 NONE SFV_RS05985 NONE SFV_RS05980 1123693 .. 1123717 - -14.4 -2.9735 ACAGAATAAATATCA TTGCCGGATG CGTGC CATCCGGCAA CATTTCACTCTTACT 89 36 SFV_RS05970 1121382 .. 1121405 - -7.4 -2.85874 TAAACACACTAATTA TGCGCCCGACT TCC AGG-GGGCGCA ATCCAGAGAGCTTTT 59 109 SFV_RS05965 1121105 .. 1121124 - -2.2 -3.12327 GTCTCATATTCAATA CCTAAA ATGATGTG TTTAGG AACCCATTATACTGA 42 21 SFV_RS05960 1119650 .. 1119672 - -7.7 -3.81951 TCCTACAGCACCAAA TCAGGTCTG GGTGG CGGACCTGA CGTATGTTGCCACAC 69 517 SFV_RS05920 1114871 .. 1114882 - -5.8 -4.63218 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG 77 442 SFV_RS05900 NONE SFV_RS05895 NONE SFV_RS05890 1111975 .. 1111986 - -3 -3.36742 GGCACAGAAACAAAC TTCA ACCC TGAA TACAAAGGTGATTCA 47 519 SFV_RS05880 1110358 .. 1110376 - -5.8 -3.47227 GGGGAAGCATCAGAA GGGCGGGG CGA CTCCGTCC GGCCAGTGAACCGTG 57 1 SFV_RS05875 1108880 .. 1108897 - -2 -5.11063 ACGAGCCAATAAAAA TACCGGC GTTAT GCCG-TA ATGCCAGTCAGTTAA 71 293 SFV_RS05860 1104462 .. 1104473 - -3 -4.55295 CGGTTGATAAATAAA TTTG CTGG CAAA CCCTACACGAAGTCG 63 28 SFV_RS05855 NONE opgC 1103045 .. 1103075 - -11.8 -5.03314 GTTATTCTCAAAAAA GAACCCGCCACCAG TTT CTGGAAGCGGGTTA TGGTCAGACTGGCGT 100 77 SFV_RS05805 1097591 .. 1097605 - -2.8 -2.62667 TCAAGTGTTAAACAT GTAACA AAA TGTAAC TCATTATATTAAAAT 40 231 SFV_RS05800 NONE SFV_RS05795 1096312 .. 1096330 - -3.8 -2.87243 GCATGAGTAGAACTA CTGCATGT TTG ACACGCAT TGCAGCCTCCGAACA 46 50 SFV_RS05790 NONE SFV_RS05785 1095039 .. 1095065 - -9.5 -5.01811 GCAGGAAATCAAAAA TAAAGCGTGAG GGGCA CTCACGCTTTC GCTTAAACAGTAAAT 93 141 SFV_RS05760 1091792 .. 1091811 - -7.8 -5.92337 ATATACGAAAAAAAA GCCCGTAC TTTC GTACGCGC TCTTCTTTAAATATG 100 39 SFV_RS05745 NONE SFV_RS05740 1088561 .. 1088573 - -2.7 -3.33162 TATCTTATTTCATAA TAACG TGA CATTA GTTCAGGGATACTTA 47 344 pgaA NONE SFV_RS05720 1081630 .. 1081643 - -2.3 -3.51825 TTACGGCAATGAGAA CAGAG ATAG CGCTG ATGTCCGGCAGTGCT 47 76 SFV_RS05715 NONE pgaB 1079710 .. 1079735 - -5.5 -2.9621 ACCAGAGTGAAAGTA CGCTACGCATA GGGG TATGCATAACA CCAGACATAATATAA 51 58 SFV_RS05705 NONE pgaD 1077937 .. 1077970 - -8.9 -2.93623 GTTCGGAAAAGAGGA TTGCGTACGTTCGGCA CTT TGCC-AACGTACGCTG CATGCATACAGTTAA 67 90 SFV_RS05675 1073011 .. 1073029 - -5.8 -3.44051 GGGGGAGCATCAGAA GGGCGGGG CGA CTCCGTCC GGCCAGTGAACCGTG 57 1 SFV_RS05670 1071583 .. 1071598 - -10.4 -3.73775 CCGATCGTCATTAAA CTGGCG TTAC CGCCAG CGGCAGCGGTATTCA 80 245 SFV_RS05660 NONE SFV_RS05655 1068788 .. 1068818 - -4 -3.63515 TGCCAGCGGGAATAA TTACGGATTTTGGC ATC GCTAAACTCCTTAA GCGATACGAGCAAAG 53 22 SFV_RS05650 NONE SFV_RS05645 NONE SFV_RS05640 1067015 .. 1067028 - -2.3 -3.28712 GTTTGCTCCTTACAA CAGCC CGCA GGCTT CTTCAAAGGACAGAC 45 6 SFV_RS05635 NONE SFV_RS05630 1064898 .. 1064913 - -7.6 -4.19817 CCCACGTAGCGAAAA TATGGC AGCC GCCATA CGCCGCGTTAATTCT 74 267 SFV_RS05625 1064000 .. 1064017 - -4.1 -2.73875 TCCTGTTGAAGATTA GCCGTTA AGTT TAACTGC CAGACCTGCGACATA 45 5 SFV_RS05620 1063719 .. 1063741 - -16.3 -4.84673 TGAAATAACAGAAAA CTCCCCCGC GAGAA GCGGGGGAG TCGCTGGTTAAACGT 100 33 SFV_RS05605 NONE SFV_RS05600 1059364 .. 1059378 - -7.1 -4.08216 TTATGCGCCTGAAAA GACGC GTTTA GCGTC GCATCAGGCATTATG 72 82 SFV_RS05590 NONE SFV_RS05585 1058107 .. 1058125 - -13.1 -3.36823 TTGCTGAAAAGCGAA CCGCCGC TCACT GCGGCGG TGAATGATCTGGAAA 95 72 SFV_RS05565 1053102 .. 1053132 - -6 -3.7456 ATAACGATATTGAAA TCCAGCGCAACCTG TTG CAGGAGATGCTGGA ACGCCACCCAGAAAT 63 365 SFV_RS05555 NONE SFV_RS05550 1048652 .. 1048662 - -2.4 -4.8236 GAGTTAAAAAAACAA GCCG AAA CGGA AATCGCCGACTTTAT 68 210 SFV_RS05520 1046465 .. 1046478 - -5.3 -2.73468 TAAGATTGTTAACGA TTTCC CTCT GGAAA TACGACTTGTGAGCA 49 292 SFV_RS05515 1045937 .. 1045960 - -9.6 -2.7806 TGCAAATCTCTAAAG CCCGGT-ACGA ATA TCGCAACCGGG TATTATTTAACTTGA 69 63 SFV_RS05510 NONE SFV_RS05505 1044486 .. 1044505 - -3 -4.14739 CCAGGCAGCTTAAAA GAT-AAGAA TTC TTCTTCATC AGTCAGGAACACGTT 56 24 SFV_RS05500 NONE SFV_RS05495 NONE SFV_RS05490 NONE SFV_RS05485 1038486 .. 1038509 - -14 -5.31456 GTAATGCATAAAAAA GAGCATTCAG TTAC CTGAATGCTC TGAGGCTGATGACAA 100 105 SFV_RS05430 1028153 .. 1028175 - -13.5 -5.48213 CAGGCAAAAGAAAAA GGGGTTAGC ATTTA GCTAACCCC TTATCTTATTTGGCG 100 36 SFV_RS05425 1027274 .. 1027300 - -10.1 -5.46657 CAGTGTAACAAAAAA CAAAGCCCCGC ATAAA GCGAGGCTATG AAAGTGTTAGCGGGT 100 45 SFV_RS05420 NONE SFV_RS05410 1025301 .. 1025325 - -2.2 -2.71924 CACCTCCCGGGAAAT CTTTACCTTT GATAT AAGGGTAAAA TTCCACATTTCAAGT 40 40 SFV_RS05405 1024925 .. 1024952 - -17.8 -5.63517 TGGCCAAATAAAAAA TCCCCGGAAGGC AAAA ACCTTCCGGGGA TTTGTTCAGGGATTA 100 38 SFV_RS05395 NONE SFV_RS05390 1023649 .. 1023662 - -8.1 -3.3862 ATAAAGACCGGAGAA GCCTG CGCA CAGGC ACAAAAATCTCAGGA 65 35 mgsA 1023091 .. 1023110 - -13.6 -4.24711 GAAAACCGTAAGAAA CAGGTGGC GTTT GCCACCTG TGCAATATTACTTCA 100 33 SFV_RS05375 NONE SFV_RS05370 1018302 .. 1018314 - -7.7 -3.57144 TCTCTTACGCCGAAA CAGGA GTT TCCTG CGGAGCTTGAGTAAT 69 2 SFV_RS05345 1015534 .. 1015546 - -4.7 -6.02914 TTTACAGAAAAAAAA CGCGG AAA CCGCT TCAGACAAGCCTTCG 100 114 SFV_RS05340 1014186 .. 1014222 - -13.2 -3.794 GTTCAATTTACTAAA GGCAAAAAAAACCCCGC AGCA GCGGGGTTTTTCT-ACC AGACGATAACTTAAG 100 36 SFV_RS05330 1011755 .. 1011769 - -5.7 -2.77895 TGTACGCTGAACAAG TCCGA TCAGT TCGGA ATAAACCAGTTCAGC 50 16 SFV_RS05325 1011121 .. 1011145 - -18.7 -4.56597 CTGTCTCTTTAAAAA GAAACCTCCGC ATT GCGGAGGTTTC GCCTTTTGATACTCT 100 53 SFV_RS05290 1001574 .. 1001605 - -2.8 -4.09739 TGAATCTGGCGAAAA TGCCGCGCTATGCC TGCT GGCACAACCCTGCG TTGTTATTGCGGGTC 58 132 SFV_RS05245 993094 .. 993105 - -4.4 -3.66256 CATACGCGTAAAACA GTCA GCGC TGAC GTGATTTAGCACCGA 55 107 SFV_RS05240 992385 .. 992399 - -4.2 -2.79273 GCTGCTGAAGATAAT GCTATC ACG GATGGC TCAGTAACATTTAAT 43 391 SFV_RS05220 NONE SFV_RS05215 NONE SFV_RS05210 NONE SFV_RS05205 988265 .. 988284 - -8 -2.5076 AACTAGTATTAAGAC TATCACTT AAAT AAGTGATA CTGGTTGTCTGGAGA 59 55 SFV_RS05200 NONE SFV_RS05195 NONE ssuC NONE ssuB 985416 .. 985448 - -12 -3.10597 CTTTTGAGCCAAAAT GCCTGATGCGACGC TTGAC GCGTCTTATCAGGC CTACAACTCCGTTGA 81 182 SFV_RS05175 981289 .. 981306 - -9.1 -5.22943 ATTAAAGGTAAAAAA GGGAGCC GATT AGCTCCC TGATGATATTAACTG 100 34 SFV_RS05170 979712 .. 979731 - -13.6 -5.43621 AGAAAGGATAAAAAA GAGCCAGC AGGC GCTGGCTC TTTGAGGAAGAAAAT 100 40 SFV_RS05165 978010 .. 978025 - -9 -5.97575 AAGGCATAAAAAAAA CAGGAC CAAC GTCCTG TTTTTTCGGCATTTA 100 57 SFV_RS05155 976323 .. 976337 - -2.9 -2.68072 GCGATCATAATCAAC TGATT TCTTC AATCA AAGATAAATTGCTGC 40 370 SFV_RS05110 963096 .. 963111 - -4 -3.58343 CGCAGCATGCTGAAA GATTCGC GCA GCGA-TC AGTTACTGGCGATGG 53 259 SFV_RS05030 944153 .. 944175 - -11.3 -2.86654 CAAATATATGTAAAG CGGGGCATT AAAAA AACGCCCCG TAATATAACTCAGAC 78 77 SFV_RS05025 942914 .. 942931 - -2 -3.1247 AGCTCGGACATGTAA CACCTA CCTTCT TAAGTG GATTTTTTATTTACT 42 58 SFV_RS05020 940565 .. 940584 - -11.4 -5.00616 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT 100 68 pflA 939659 .. 939682 - -13.2 -5.4505 GCGCGGAATAAAAAA GCGGCAACTC AATA AAGTTGCCGC TTTACGGGGAAATTA 100 38 SFV_RS04995 937520 .. 937544 - -8 -3.14344 TATCTGCTCTATGAA CAG-ATCAAGG AGTA CCTTGATACTG GTCGTTTAGAATGTG 61 184 SFV_RS04970 935526 .. 935546 - -4.5 -3.91674 TTCACACATAAAACA CTCTCCAGG AAA CCCGGGGCG GTTCAGCTGGTCACC 60 194 SFV_RS04930 930413 .. 930430 - -9.8 -3.77722 GCTAATCAGTAACAA CCGGGG TTTCGG CCCCGG TTCTCTTTTATTTCT 79 33 SFV_RS04880 916494 .. 916520 - -6.4 -5.04249 CGGGGAAAAAATAAA GGCGACCCATAG TCG CAAGGTGTCGCC TTCTTTACTTTTGTT 83 55 SFV_RS04875 NONE SFV_RS04870 NONE aat 912034 .. 912044 - -8.2 -3.40622 TACTCCGAAAACACA CGGC TAA GCCG CACCAAAAGCGCAAC 65 174 SFV_RS04860 911631 .. 911647 - -10.1 -5.56263 ATCACAAAATAAAAA GGCCGGT TAA ACCGACC TTTTACTCGTTCTTT 100 68 SFV_RS04855 911316 .. 911335 - -10 -5.82388 AAATGCGAAAAAAAA GCTCGCAC TTTC GTACGAGC TCTTCTTTAAATATG 100 39 SFV_RS04840 907715 .. 907735 - -12.6 -4.96848 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT 100 62 SFV_RS04825 903245 .. 903262 - -6.9 -3.61715 CAGCCTGTTGAATAA CGATCGG GAAG CCGAACG AGAACATTTAACGGC 63 296 SFV_RS04815 901557 .. 901571 - -3.5 -3.81926 TATTTTAAAAACGAA GGCGA GTCAT TCACC AGATAAATAAATCCA 53 119 SFV_RS04810 901056 .. 901067 - -5.8 -4.13014 GTCATACGCGTAAAA CAGC CAGC GCTG ACGTGATTTAGCACC 65 109 SFV_RS04805 NONE SFV_RS04800 899700 .. 899758 - -8 -3.03412 CAATGCCATATAAAG CCACTGGCGGAGGGAGCGCGCAGGGGGC AGCCA GTCGCC-GC-CGCCCCCTGCACCACCGG GCTCTGGCGAACAAA 62 249 SFV_RS04795 NONE SFV_RS04790 NONE SFV_RS04785 895815 .. 895840 - -11.9 -3.38581 ACTAACGGTTAAATA GCCCGATGAAA GGAA TATCATCGGGC ATAAGGCGATTATGC 85 35 SFV_RS04780 893962 .. 893992 - -2.6 -2.89569 TGCGTAAATCAATCA TGGCATGTCC TTATTATGACG GGAAATGCCA CCCTTTTTACCTTAG 42 32 SFV_RS04775 NONE SFV_RS04770 NONE SFV_RS04765 890365 .. 890382 - -3.3 -3.92641 AAGCGGATGCAGAAA CTCAGGC GATT GCCGAAG CATTGCTGGAGAAAT 55 51 SFV_RS04750 888972 .. 888985 - -2.3 -2.68305 CCAAAAAGCAATCCA GCGGT ATAG ACCTC AGTCACAAGATGGGG 38 58 SFV_RS04740 NONE SFV_RS04735 887302 .. 887317 - -3.2 -4.88405 AATTTTGAAACAAAA CCTGTT CATT ATCAGG ATTTATTAACACGAT 74 434 SFV_RS04725 NONE SFV_RS04720 885281 .. 885309 - -3.2 -3.96148 GTCGGTGAGCATAAA TGT-CGGCATTCC TCAC GAAATGCCGGATA ATTTACGGGGTTTAT 55 56 SFV_RS04715 NONE SFV_RS04710 NONE SFV_RS04705 NONE artM 882085 .. 882111 - -9.5 -6.01187 AATGAAATAAAAAAA GACGGATAACT TAGTG AGTTGTCCGTC TTCATTATAAGAATT 100 168 SFV_RS04695 881061 .. 881074 - -5.9 -5.5604 TGAAGCAATAAAAAA GCCAC AGGT GCGGC TTCAGATTGCTGATC 93 182 SFV_RS04635 871870 .. 871902 - -6.9 -5.40625 ACAGCACAGAAAAAA TCAGTAAAGCCCTCA ACG CGAGGGCTTGTCAGA CGATCAGGCGTCCAG 91 29 SFV_RS04625 869395 .. 869431 - -3.7 -5.60689 TTAGATAACAAAAAA CCCATCAACCTTG AACCGAAATGG CGGGGTTGATGGG CTCCACAAAATGGGG 88 138 SFV_RS04615 NONE SFV_RS04610 866637 .. 866654 - -3.5 -3.31799 GACAATTTTTCATAA TCATTTC GCCT GAAATAA TGCAGCGGGTTAATT 48 97 SFV_RS04605 866321 .. 866347 - -6.6 -5.44119 CGGAGGGTAAAAAAA TGCCTGATTG ATTTGTG CGATCAGGCA TTCTCGAATTAATGG 91 34 SFV_RS04595 864165 .. 864189 - -3 -3.02461 TAATCCCTCTGAATA GTTATTGAAGCG AGC CGCT-CAATA-C TACACTTTTTAGCAG 43 44 SFV_RS04590 863357 .. 863381 - -12.1 -3.30159 TTAATCTTCTGATAA CCGGATGGCGC GAA ACGTCATCCGG TTATACGTCATTAAT 85 36 SFV_RS04565 859991 .. 860013 - -3.4 -3.71527 GGGGAATTACTTAAA GTTAGCCCAC GCA ATTAGCTAAC GGGAATCATCACCAC 53 17 rimO 856819 .. 856861 - -11.5 -2.78018 AGCTGGCAGTAATCA TTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAA TTAAACCCGGCTACC 77 26 SFV_RS04505 NONE SFV_RS04500 844477 .. 844509 - -12 -2.83403 GCGTCTGGAGCAAAT GCCTGATGCGACGC TTGTC GCGTCTTATCAGGC TTGGAGGTGGCAATT 79 39 SFV_RS04490 NONE SFV_RS04485 840179 .. 840209 - -9.6 -2.74012 TGATGATGTGAATGA TTTAGCCCGGCGAC GCC GCAGCCGGGCCGAA GAGATTACAGCATAT 69 30 SFV_RS04480 839226 .. 839244 - -11.7 -4.43173 AAAAAGAAGGGAAAA CCGGAGC GCATG GCTCCGG TAGAGAGGTCAGCTG 95 34 SFV_RS04475 837656 .. 837680 - -8.5 -3.79633 GACAAATGCAAAATA GCCTGATGCGC TAC GCTTATCAGGC CTACGCAGTACCTGT 75 181 SFV_RS04465 834825 .. 834843 - -8.8 -5.63517 CTGGCAAATAAAAAA GGCGGATT ATG AGTCCGCC TTTGTTTTACGTTTT 100 46 SFV_RS04450 832891 .. 832910 - -10.7 -3.12803 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCTGAAGGT 76 25 SFV_RS04445 831028 .. 831045 - -8.4 -4.96848 TTGGTGATATAAAAA TCCGCC TCTCGG GGCGGA TTTTTGTTTTTAAGG 91 35 SFV_RS04435 829214 .. 829243 - -13.1 -3.96827 AAAAGTAGCGAGAAA TTCTGCATGGTTA TGCA TAACCATACAGAA ATGTAAATTTAATTA 100 34 SFV_RS04430 828388 .. 828408 - -13.3 -5.07652 GGCTGCAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGGGTACT 100 67 SFV_RS04425 NONE glnH NONE glnP 826507 .. 826518 - -4.4 -2.95448 TTAAATTCAATCACA GGAT TTTC ATCC TTCTTTCCAGACGAC 48 9 glnQ 825643 .. 825662 - -6.4 -3.30006 AGGAAGGGATATTAA GCAGGTTG CTGA CAACGTGC GGGCTTTTTTGCCGG 59 146 SFV_RS04400 823262 .. 823279 - -5.5 -3.15544 CTGGACCTTTATGAA CGACGAGC AGC GC-CGCCG TTTTGTTAATCGCCA 54 44 SFV_RS04390 821803 .. 821824 - -7.3 -4.23434 CAAAACAGGCGAAAA CTGCATCCA GAGG CGAATGCAG TTACGTTGGTGGGGT 74 40 SFV_RS04385 821240 .. 821265 - -16.3 -3.90762 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACCCACGCCGGG 100 5 SFV_RS04375 817829 .. 817846 - -12.7 -4.58283 CAAGTTCTCCAAAAA GTGGGGC CTGC GCCCCAC ATCTGAATCAGAAAT 100 33 SFV_RS04370 NONE SFV_RS04365 816737 .. 816749 - -5.5 -3.5882 CACAGCAGCGTTAAA GGCAC GGA ATGCC ACGCAAAATACAAAT 59 71 SFV_RS04360 816048 .. 816069 - -13.7 -5.81412 GCCAGCTAAAAAAAA GCCCGTCCA GTGG CGGACGGGC AAACAAGGGTAACAT 100 226 SFV_RS04340 810971 .. 810982 - -7.2 -3.30124 TTGTAGGCCGGATAA GGCG TTTA CGCC GCATCCGGCATTTCA 59 116 SFV_RS04325 NONE SFV_RS04320 NONE SFV_RS04315 NONE SFV_RS04310 NONE SFV_RS04305 803433 .. 803445 - -4.8 -3.54475 TTCTTCAGGAGAGAA GCCA TGAAG TGGC AACAACGTGTTCGTG 53 388 SFV_RS04295 NONE SFV_RS04290 NONE SFV_RS04285 800144 .. 800154 - -3.2 -4.015 GCATGGACGAAATAA GCTC CTT GAAC TGGCAGGAAAATGCC 58 219 SFV_RS04245 795475 .. 795495 - -8.3 -2.64616 CCTGGAGTCAGATTA TCCGCGCTA CAG TAGCGCAAA TTGCGGGGAAACAGC 63 225 SFV_RS04240 794237 .. 794249 - -3.4 -4.46212 CGTTGCAGCAGAAAA TCCA TGAAC TGGA AGGGCTGATGATGCA 65 320 SFV_RS04210 NONE SFV_RS04205 786205 .. 786231 - -13.8 -2.53759 AATACCTTTAAGTGA TACCAGATGGCA TTG CGCCATCTGGCA GAGTGATTAACTAAA 86 32 SFV_RS04200 784766 .. 784777 - -7.2 -3.30124 CCGTAGGCCGGATAA GGCG TTTA CGCC GCATCCGGCAAATAG 63 51 SFV_RS04180 778573 .. 778596 - -15.3 -3.06133 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACTTATCT 93 30 SFV_RS04170 774780 .. 774791 - -5.8 -3.76373 GGCTGAACAGGGAAA CGGA TGAA TCCG GGGAGGCCCGGGGGC 63 91 SFV_RS04155 NONE SFV_RS04150 772518 .. 772538 - -10.5 -3.58726 CTGTGTGACAGACAA GTAAGCCCT GAT AAGGCTTAC ACTGCTGAACTTATT 78 325 SFV_RS04135 NONE SFV_RS04130 769423 .. 769443 - -11.9 -3.71487 TATGATAGCGAAGAA GCCTTCTAC AAA GCAGAAGGC CGTGCAGGATATTCA 88 303 SFV_RS04110 NONE SFV_RS04105 NONE SFV_RS04100 NONE SFV_RS04095 NONE SFV_RS04090 NONE SFV_RS04085 NONE SFV_RS04080 764310 .. 764347 - -2.1 -3.05384 CCTTTCGGCATGTAA GAGGCTAACCTACATG TGCAAAG CATG-AAATTGGCCTC AGATTAATGTTAAGC 42 184 SFV_RS04075 764009 .. 764045 - -8.6 -5.74288 ATAAACAACAAAAAA CCCGCCGAAACGCTGAG AGAT CACAGCGATG-GGCGGG TTAAGTGCGGGTGCG 100 103 SFV_RS04070 763578 .. 763595 - -7 -2.87564 GCACGGTGTTACACA GCAGGA GTTCAA TCCTGC TCAAGATTGTAGATG 56 16 SFV_RS04065 NONE SFV_RS04060 NONE SFV_RS04055 762014 .. 762026 - -6.2 -5.96219 CAGGTATAAAAAAAA CCGC ATAAA GCGG GCTCTTTCAAATGTC 100 106 SFV_RS04050 NONE SFV_RS04045 761755 .. 761770 - -4.6 -3.05384 TGCCTGCTGAGCTAA GTCGGC GCTG GCCCAC CACCGAGGACTCGAA 49 18 SFV_RS04040 NONE SFV_RS04035 761332 .. 761347 - -3.9 -5.00616 GCGCTGTGCAAAAAA CCGCC AACCAA GGCAG TTAAGAGTGTGTTCC 74 286 SFV_RS04030 760665 .. 760684 - -4.2 -3.62046 CTATCGTTTTAATAA CCGGGATG AAGC CATCTCAG TAATACGGGAATACA 53 182 SFV_RS04015 NONE SFV_RS04010 NONE SFV_RS04005 NONE SFV_RS04000 756222 .. 756232 - -5.4 -2.57463 AAGCGCCCCGAGAAG TACG TAG CGTA AGGATTATTTTACAG 50 30 SFV_RS03995 755278 .. 755289 - -5.8 -4.63218 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG 77 439 SFV_RS03980 753892 .. 753922 - -2.6 -2.5474 TTGCATGTATAATAT CG-AGCCGTTCCA ATACAA TAGAACGGGTTCG CCTTCAGTTGCAAAA 38 313 SFV_RS03970 NONE SFV_RS03965 751980 .. 751999 - -8 -2.5076 AACTAGTATTAAGAC TATCACTT AAAT AAGTGATA CTGGTTGTCTGGAGA 59 57 SFV_RS03960 NONE SFV_RS03955 NONE SFV_RS03950 NONE SFV_RS03945 NONE SFV_RS03940 NONE SFV_RS03935 NONE SFV_RS03930 NONE SFV_RS03925 NONE SFV_RS03920 744400 .. 744422 - -7.7 -3.81951 TCCTACAGCACCAAA TCAGGTCTG GGTGG CGGACCTGA CGTATGTTGCCACAC 69 489 SFV_RS03900 741029 .. 741053 - -2.1 -4.21787 AAAAAACGTTCAAAA CCGATAACAAC CAG GCTGTCACCAA ATGACTCATATCACA 57 117 dpiA 740434 .. 740456 - -13.4 -2.6955 CAAGTAAATAGTAAT GCCGGAGGCA AGT TTCCTCCGGC TTTATCATGTCACCC 85 35 pagP 737742 .. 737758 - -7.3 -4.02302 TTTACATGAAAAATA GACACAA ATG CTGTGTC GGTTATCAGTACACC 72 158 SFV_RS03880 737467 .. 737483 - -9.4 -5.9663 AAAGACCAAAAAAAA CCCGCT GATTA AGCGGG TTTTGAATTCTTGCT 100 49 SFV_RS03870 736198 .. 736211 - -6.7 -3.91801 AAAACATCATAATAA TTGCG GCGG CGCAA AGCGACGGTTGTTTA 68 3 tatE 735793 .. 735810 - -11.3 -5.24129 CTGTCTGATAAAAAA CCCGCTT TTTG AAGCGGG TTTTTTGTATCGAAC 100 72 SFV_RS03850 733086 .. 733107 - -5.1 -3.494 GAACTGGGTATAGAA GCGCATC CTCGGGCT GACGCGC CTGGTGTCTATGTCG 56 340 SFV_RS03780 719335 .. 719353 - -11 -3.30039 TACGGAGAAGGAAGA CCTGTCGA TCT CCGACAGG CTCTCGACCTGTATC 76 178 SFV_RS03770 NONE SFV_RS03765 716118 .. 716139 - -2.9 -4.9934 ACAACATTACAAAAA TGCGGAAAG ATTA CTTGCCGGA CTTCCCGCACATTAA 70 50 SFV_RS03755 NONE SFV_RS03750 713285 .. 713328 - -14.5 -2.60763 TTGAGACCTCATAAT CACGGCTGCCGGATGCGGC GTAAAT GCTGCATCCGGCATCGGCG CAAAAAACACATCGT 87 40 ubiF 699786 .. 699801 - -10.4 -5.22312 AGCCACATTAAAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTTCTGC 100 153 SFV_RS03625 690240 .. 690262 - -12 -6.15828 TTGATGAAAAAAAAA GCGGCAGAGA AGA TCTCCACCGC TTGTCATTGTTGGAT 100 76 SFV_RS03620 688229 .. 688245 - -11.5 -5.4588 GAAAAGCAGAAAAAA CGCCGCA GAG CGCGGCG TTTGGGATTGTTTGC 100 226 chiP 686429 .. 686453 - -9.2 -3.05463 AGTTTTTTCATTGAA TGCGGCAGGC ACAAA ACCTGCCGCG TCGGGCATCAGAAGA 68 33 SFV_RS03610 686034 .. 686051 - -11.3 -4.5442 GCCTGAACGAGAAAA GCCAACC TGCG GGTTGGC TTTTTTATACAAGGG 100 72 SFV_RS03595 685029 .. 685045 - -6.5 -2.78495 TGACCAGGAAGATTA CGCCGAA TAT TTCTGCG ACGCATTGGGCACCA 51 248 SFV_RS03575 NONE SFV_RS03570 680976 .. 680995 - -5.6 -5.41359 AAGCAAAGTAAAAAA GGGCGATC TTGC GACCGCTC TTTTTTTATTAAATG 87 44 SFV_RS03555 676331 .. 676343 - -5.5 -3.1082 CACGCAGCGAAGAGA GCGAC AAG ATCGC CGCGCTGGATGCCGG 50 459 SFV_RS03520 668408 .. 668437 - -13.7 -3.72009 ATAATACGATGGAAA CGTCTTCCATGTT AATT ATCATGGAAGACG TTGATGTTGAACACC 100 85 SFV_RS03515 NONE SFV_RS03510 667132 .. 667148 - -2.3 -3.12749 TTAACAATCCCAATA TATTCAC TAT GCAAATA AAACCACTAGTAACA 42 183 SFV_RS03505 NONE SFV_RS03500 NONE SFV_RS03495 661600 .. 661626 - -10.2 -5.32699 TTAAATATTAAAAAA GCTGGGAAGATT TAA AACCTTCCTAGC TTTTTATTCTGTCTT 100 42 SFV_RS03485 NONE SFV_RS03480 659074 .. 659089 - -6 -4.02132 GCTGAAATTCAGAAA CCGCGC GCTG GCGCTG GAGTCATAATAGGCC 68 184 SFV_RS03470 NONE SFV_RS03465 NONE SFV_RS03460 NONE SFV_RS03455 NONE SFV_RS03450 NONE SFV_RS03410 645364 .. 645374 - -5.4 -4.32436 ACATTACCAGGAAAA GCAT ATA ATGC GTAAAAGTTATGAAG 70 162 sdhC 644594 .. 644607 - -3.1 -2.78384 GCGTTGCTTACCATA CG-AGG ACT CCTGCG AGAAGTGAAAGCACG 43 4 sdhD NONE sdhA NONE sdhB 641680 .. 641691 - -7.2 -3.30124 TTGTAGGCCGGATAA GGCG TTCA CGCC GCATCCGGCACTGGT 63 81 SFV_RS03385 NONE SFV_RS03380 NONE SFV_RS03375 637358 .. 637392 - -10.8 -3.55444 TCGTTATCTTTTAAA CCGTAGACCGACAC CCTATCC ACGTCGGTCTACAG TGCAGGTGAAGCTTA 81 46 sucC NONE SFV_RS03365 635191 .. 635208 - -11.3 -5.01535 CGATAAGCACAAAAA GGCCATC ATAC GATGGCC AACCATGTCGAAACC 100 101 SFV_RS03355 NONE SFV_RS03350 NONE SFV_RS03345 629467 .. 629483 - -5.3 -2.6072 CATTTAATTAACTTA TAATTAT ATT ATAATTA ACTCACCCGGGGTTA 48 12 SFV_RS03340 NONE SFV_RS03335 NONE SFV_RS03330 NONE SFV_RS03325 625682 .. 625707 - -7.6 -4.63184 AAGGGAGCGTAAAAA TTTATGGGCC TGGAGC GGCCCATAAT TTTTTAAAGAGAATT 82 46 SFV_RS03320 NONE SFV_RS03315 NONE SFV_RS03310 NONE tolA 622696 .. 622709 - -2.3 -2.70544 CAAAACTACCAGAAC CCCGT GGCA ACCGG TGCCTGATGTTGACC 40 63 tolB NONE SFV_RS03295 620749 .. 620760 - -2.2 -2.52896 TGATGTCTGAAGTTA CTGC TCAT GCAA TTCTCTTAGTAAACC 39 31 SFV_RS03290 619926 .. 619953 - -10.7 -2.79302 ATGATTCGCACGACA CGACCAGAAAT AATGCG ACTTCTGGTCG TGTGTTATGCATTAC 74 37 SFV_RS03285 619612 .. 619624 - -6.3 -3.46602 CGCTGGATACTACAA CTAAC TAT GTTAG TGGGGGTCGTGCAGG 60 126 SFV_RS03280 NONE SFV_RS03275 619410 .. 619424 - -8.5 -5.27779 CTGAATAGCAAAAAA GCGCC TTTAG GGCGC TTTTTTACATTGGTG 95 36 SFV_RS03270 618118 .. 618131 - -6.7 -3.53224 CATCTTTCCCCCAAA GCGTA ACGT TACGC CTTATTATTCGTTAT 62 37 SFV_RS03265 617269 .. 617294 - -2.5 -3.13299 GGATCAGATCCAACA CTACCTGATGG ATCA CTATCAGATTG AGCACGCCACCATTC 43 117 SFV_RS03245 614446 .. 614466 - -8.3 -4.3179 TTAAAAAATGAGAAA GCCGACT GCAAGTG AGTCGGC TTTTTTGTTTGTCGT 84 145 SFV_RS03200 606312 .. 606329 - -8.4 -5.35224 TTGAGAAAAAGAAAA TGCCCG ACTAAG CGGGCA TTCAGGGAATCAATG 100 35 modA NONE modB NONE modC 603253 .. 603275 - -5.6 -3.49475 CCGACTTTCACACAA GTCGCTTC TCTGGCT GAAACGAC GCAACAAGTTAACGC 56 399 SFV_RS03170 NONE SFV_RS03165 601208 .. 601219 - -2.2 -2.80398 TAATTAATGTAATTA CGAA ATGA CTCG CAGGTTTAAGTGATT 40 70 SFV_RS03160 NONE SFV_RS03155 NONE SFV_RS03150 NONE SFV_RS03145 NONE citX NONE citG NONE SFV_RS03130 594268 .. 594295 - -18.5 -5.42265 TTAAATCATAAAAAA GCCCGCCAGGT GGGCTT ACCTGGCGGGC GTGATGATTTATTCA 100 57 SFV_RS03125 593236 .. 593258 - -12.7 -5.11836 ATACCCAAAAGAAAA CCCTCACCG TCAGG CGGCGAGGG TTTAACTCACATGAT 100 174 SFV_RS03120 592714 .. 592733 - -12.2 -3.53811 CTGATTTTGCGTAAA GAGGATGC GAGT GCATCCTC TGGGCAAAGCGAGTT 88 60 SFV_RS03115 592109 .. 592134 - -7.5 -3.75153 GGTTTTGAAGCGAAA GGCAGCACCAC GGAA ACGGTGCTGAC TAACCTGAAACTGGA 69 432 SFV_RS03105 590603 .. 590629 - -18 -4.7373 TTATGGCATTAAAAA GCCCTGCCGGGA TGT TCCAGGCAGGGC GGCATAAATACTTTT 100 46 dsbG 586946 .. 586956 - -3.2 -4.08692 TAAGTTTTTCTAAAA TAGC ACA GCCA CTTAGGGTAGAGCGA 57 107 SFV_RS03085 585463 .. 585474 - -3 -3.727 TTGATTACATCGAAA TGTT TTAT AACA GTAAGCGTCGGCATG 53 477 SFV_RS03070 NONE SFV_RS03065 NONE SFV_RS03060 NONE SFV_RS03055 NONE SFV_RS03050 NONE SFV_RS03045 581123 .. 581139 - -3.5 -3.01712 CCTTTTCGGTGAATA CCCCGGC ACA GCTGGCG CTTGCTGATATGCTA 46 359 SFV_RS03035 579085 .. 579095 - -2.4 -4.09685 CGCTACGGTGGAAAA GGCG GCG CGCG CTGCTGCTAAATTTG 55 45 SFV_RS02995 570361 .. 570383 - -3.4 -3.12351 GCGTCCGACAGTTAA TGCTTAAAAC AGC GCCTTAAGCC GTTCCAGCACTTGCA 45 6 SFV_RS02985 NONE SFV_RS02980 NONE SFV_RS02975 566188 .. 566200 - -7.7 -2.98789 ATCCAGAAAACAGGA TGCCA TGA TGGCA GACCACTTAGTTTAA 62 37 SFV_RS02940 556234 .. 556263 - -17.9 -3.30124 TTGTAGGCCGGATAA GGCGTTCACGCCG CATC CGGCGTGAACGAC GCGCACTTTGTCAAC 100 56 SFV_RS02935 555131 .. 555162 - -5.3 -3.45571 GTTTGGAAAGATGAA GCCCCAAGA--GATA TTTC TATCAATCCTGGGGC TGCCACTCCGAACCT 56 362 SFV_RS02915 NONE SFV_RS02910 552964 .. 552977 - -6.7 -3.03124 GTTGACGGGGCAATA TGCAG TTCG CTGCA TAGCGGTCCGACCCT 58 73 SFV_RS02905 552071 .. 552087 - -3.6 -3.06696 GCTTTTTTTAATATA TCTCGC TCAAG GCGAGC TTCATTTAACGCTGA 45 359 SFV_RS02900 550836 .. 550852 - -3.7 -4.92363 AAACATGGAGAAAAA GGTTTAA TTC CCAAACC TAAAGGCGTTAGTGC 76 332 SFV_RS02890 549067 .. 549078 - -3 -3.29043 AAGGGTGTTTCATAA CATT GTTA AATG TAAGTTAAAACACCA 46 77 SFV_RS02885 NONE SFV_RS02880 NONE SFV_RS02875 547609 .. 547626 - -14.1 -3.38224 ATCTGAGGGGAAATA GCCGGGC AGAT GCCCGGC AAGAGAGAATTACAC 100 35 SFV_RS02870 546243 .. 546273 - -9.7 -2.50345 ATCCGACAAAACGAT GTCCGCTCTCATC CATTC GATGAGAGCGGTT TTTTTAATTACTGCT 68 33 SFV_RS02850 NONE SFV_RS02845 539247 .. 539260 - -6.7 -3.9392 GTTGAGGCCAAAGAA TGAGC ATGG GCTCA GGTAGAGGGCAAGGC 68 276 SFV_RS02840 NONE SFV_RS02835 NONE SFV_RS02830 536315 .. 536344 - -2.9 -4.55287 CGCAGTCACATAAAA TTGTCAGTGGTGTT CAT ATCAACACTG-CAA ACAAAAACACGGCTG 65 323 SFV_RS02820 NONE SFV_RS02815 534523 .. 534533 - -5.4 -3.35597 TGTATCCGGCAAACA CATC AAT GATG AACGCCACATAGACG 56 117 SFV_RS02810 533746 .. 533757 - -2.2 -2.59748 TATGGCTATAAGCGA CACA AAAC TGCG TACTATTTATGGTAA 39 363 SFV_RS02785 NONE SFV_RS02780 NONE nfrB NONE SFV_RS02770 NONE SFV_RS02765 522834 .. 522860 - -13.8 -3.44487 GACGAGAGCGAAAGA GGTAAGCCAGGT CGT ACCCGACTTACC TGGAGGGGATTTAAT 100 36 SFV_RS02760 521777 .. 521807 - -11.8 -2.60079 TGACCGTATAATTCA CGCGATTACACCGC ATT GCGGTATCAACGCG CCCTTAGCTCAGTTG 73 145 SFV_RS02750 520909 .. 520928 - -8 -2.5076 AACTAGTATTAAGAC TATCACTT ATTT AAGTGATA CTGGTTGTCTGGAGA 59 42 SFV_RS02745 NONE SFV_RS02740 519588 .. 519602 - -4.4 -3.54743 TATGATCAATTATAA TTAATA TTA TATTAA TTCGTATAATTTGGC 54 64 SFV_RS02720 NONE SFV_RS02715 516054 .. 516075 - -2.4 -4.30844 AGCCCAGCAGCAAAA CAATAAAT GCATCA ATTTACTG AAAGCTGTACCTGAT 60 136 SFV_RS02695 NONE SFV_RS02690 512698 .. 512719 - -15.9 -3.95836 AGTCTGAAAAGAGAA CCGGCCTGT TGAT ACAGGCCGG GAAAGGGATCAGGCA 100 34 SFV_RS02685 511613 .. 511623 - -6.8 -3.70446 CTACAGCGAAGAGAA CCTG AAG CAGG CGCGTGCGGCGCTGG 63 513 SFV_RS02675 NONE SFV_RS02670 509191 .. 509201 - -2.4 -4.08394 ACATGCGTCTTAAAA CTCC TGT GGTG CACAACTCTCGGCTT 55 121 purE NONE SFV_RS02660 507265 .. 507280 - -4.6 -4.34402 TGCGGTATATGAAAA CTGGGG AACG CCGCAG CAACGTGCCATTCGC 67 351 SFV_RS02645 NONE SFV_RS02640 NONE SFV_RS02635 NONE SFV_RS02630 502927 .. 502937 - -4 -3.09968 CATGGAATTTGAAGA TATC GCC GATA ACGCAGCGGATGCAC 46 377 SFV_RS02605 498543 .. 498568 - -4.7 -2.94412 GTGAACCTCAAATCA GCTTGCGCGCTA TTT TA-CGCGCCAAC GCGCAAGGAAACTTG 48 45 SFV_RS02600 497340 .. 497355 - -6.1 -6.28401 GAAAAAATAAAAAAA CCGAC TGTCAT GTCGG TTTTTTATATCTGTA 100 95 SFV_RS02585 NONE SFV_RS02580 NONE SFV_RS02575 491329 .. 491358 - -14.4 -3.27992 AATTGAAGAAGAAAT GATGCGATGCCG GATGCG CAGCATCGCATC CGGCGTTGTGGTTCA 100 60 SFV_RS02560 NONE SFV_RS02555 487987 .. 488005 - -3.8 -4.7497 GCGATGTAGCAAAAA TTACCGGC CTG ACCAGCAA AGCCATTCGCTTCTA 73 389 copA 482666 .. 482719 - -10.1 -2.57931 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCATCCG AGCA CCATTGCCTGATGCGACGCTTACGC GTCTTATCAGGCCTA 70 150 SFV_RS02525 481194 .. 481205 - -7.2 -2.98014 AACGAAGCAAGCATA CGCC TGAT GGCG GTCCAAAAAAAAGAG 59 176 SFV_RS02520 480644 .. 480667 - -16.8 -3.67976 GGCAGTAATCCGAAA GTGCCGGATG TTTG CATCCGGCAC AATGCTTAATCGCGG 100 31 SFV_RS02510 477514 .. 477540 - -15.3 -3.09831 GCGACTGTAAAACGA TGCAGCCAAAG TTTGC CTTTGGCTGCA ATGAAATCAGTCTTT 93 32 SFV_RS02505 475528 .. 475539 - -7.2 -3.50393 TCGTAGGCCAGATAA GGCG TTCA CGCC GCATCTGGCATTTGG 65 119 SFV_RS02495 473017 .. 473050 - -6.1 -3.66995 GGGAAAAAATATGAA TATATTCCAGCGC TTAATGCC ACGCCGGAACATA TCGAAATGATGGCTA 60 60 SFV_RS02450 NONE SFV_RS02445 NONE SFV_RS02440 464051 .. 464067 - -5.7 -3.98236 AAACGCGACTACAAA GGCGACG ATC CGACACC TGCGGTTGGGTAATA 63 73 SFV_RS02425 NONE SFV_RS02420 455401 .. 455416 - -11.8 -5.28176 GTTATGCATAAAAAA GGCCGC TTAC GCGGCC TTAGTGATTACATGT 100 45 SFV_RS02415 NONE SFV_RS02410 454124 .. 454135 - -2.2 -4.07568 TCCGGTTGCTGAAAA TGCG GCAA CACA GTAAGACGAAAAGTC 55 162 SFV_RS02405 NONE SFV_RS02400 NONE SFV_RS02395 450918 .. 450932 - -2.7 -3.57263 ATGCCTATCGGGAAA TGGCC GCTAA GGCCG CGCCATTGTTTAAAG 51 342 SFV_RS02385 450118 .. 450143 - -16.3 -3.90762 CAGCCCCGAAAAAGA GCCAGTCAGTT GCTT AACTGACTGGC ATTACTCCGCCCGGA 100 46 SFV_RS02370 447013 .. 447039 - -11.7 -5.07053 AAGCACTGCAAAAAA TAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA 100 31 SFV_RS02335 438324 .. 438338 - -8.6 -4.89477 GCTTGAACAATAAAA GCGTTA TGG TAACGC CTGCGATTAACCCGG 91 50 SFV_RS02330 437096 .. 437118 - -10.7 -3.12351 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAAC 76 510 SFV_RS02275 NONE ampG 424599 .. 424619 - -4.9 -4.90525 CAATTCGAAATAAAA CAATTATTT AAC AAATAATTA TCATTAAAGTGACAA 77 226 SFV_RS02265 NONE SFV_RS02260 NONE SFV_RS02255 NONE SFV_RS02250 422481 .. 422491 - -5.4 -2.57463 AAGCGCCCCGAGAAG TACG TAG CGTA AGGATTATTTTACAG 50 189 SFV_RS02240 NONE SFV_RS02235 NONE SFV_RS02230 NONE SFV_RS02225 NONE SFV_RS02220 418084 .. 418097 - -8.1 -5.60689 TCAGACAATAAAAAA GGTGC CGTA GCACC TTTTTAATAGAGAGG 100 46 SFV_RS02215 NONE SFV_RS02210 NONE SFV_RS02205 416957 .. 416977 - -9.7 -3.47227 CTGTAAGGACCACAA TCGTTGCCG CAA CGGCAACTA TTAACGGCAAGGATG 74 137 SFV_RS02190 412778 .. 412815 - -5.7 -3.14564 TTATGGTGTTACGAA GTACGGTGCTATT TTATTTTTCATG AATAGCACCGTGC TTATTATTTAATAAG 54 33 SFV_RS02185 NONE SFV_RS02180 408216 .. 408226 - -8.2 -3.29461 TAACGCGGTCGATAA CGCG AGT CGCG AAGTGGAGTCCCGTT 65 504 SFV_RS02170 NONE SFV_RS02165 406114 .. 406126 - -6.3 -3.42069 TGAAGCGGAAGAAGA GAAGT TCG ACTTC AGTATTCTCGATAAA 58 421 SFV_RS02155 NONE SFV_RS02150 NONE SFV_RS02145 NONE SFV_RS02140 400283 .. 400306 - -6 -2.50994 CGGAAGTGGATTAAG CCCAATCGTTC CTG GCACGAT-GGG ATCGCTGGCGGCGAT 49 476 SFV_RS02105 395632 .. 395643 - -5.8 -4.08767 GCCACTGTTTGAAAA TCCC TTGC GGGA GTGAAAAAGGCGCAA 65 290 SFV_RS02100 394696 .. 394716 - -12.6 -4.14257 GTTAACAATCAGAAA TGCCGGGA ATAAA TCCCGGCA TTTTCATAATCAGAA 100 35 SFV_RS02060 387638 .. 387669 - -2.2 -4.11216 CTGGCAGGTGGAAAA GCAGGATACGGCG TTATTCG CGCTGTA-CCGGC GAATGATTGTGCTGC 56 299 SFV_RS02030 NONE SFV_RS02025 376113 .. 376134 - -3.7 -3.48684 TCACAACCACCAGAA CGGCTAC CAATCACC GTAGCCA ATAAAGTGATAGCTT 52 107 SFV_RS02020 374771 .. 374813 - -5.5 -5.30189 CACAAGAGTAAAAAA CGTAGGCAATTGGCGCATCA TGCC TGATGCGACGCTTGCCG-CG TCTTATCAGGCCTAC 83 121 SFV_RS02010 372604 .. 372624 - -3.3 -4.63932 GAGCTGTTAACAAAA CAATTTACC AGC GATAAATGG GGGTTAGTGAATATT 68 223 SFV_RS01965 368127 .. 368167 - -9.9 -4.65182 TACAAAGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCCGGC GAAAGTCATCAGGAT 91 34 SFV_RS01955 NONE SFV_RS01950 NONE SFV_RS01945 365193 .. 365205 - -4.8 -4.86731 GGGGCTGAAATAAAA CTGC GCCCG GCAG TGAATTTTCGCTGCC 75 433 SFV_RS01920 361824 .. 361848 - -10.8 -4.42851 TGAAGAAACTGAAAA CGCCCAATAA GAATA TTATCGGGCG TTAAAATATTACATT 90 34 SFV_RS01910 360865 .. 360880 - -5.4 -3.16068 TGCCGAAGCGAAAAC GGGTAA ATCA CTACCC CGCGAAATGTTGCCT 52 198 SFV_RS01890 357112 .. 357148 - -11.8 -3.55866 CTATATCGAAATGAA TAAAGGCAAACTGGTCG CTAT CAACC-GTTTGCCTTCA GAGTATTAATCAGGA 88 35 SFV_RS01855 351638 .. 351649 - -5.8 -3.22943 GAGAAAGAGAGCGAA GCCT TGTT AGGC TTTTTATTCGCCCAT 54 314 SFV_RS01825 NONE SFV_RS01820 345088 .. 345103 - -6.1 -3.02511 TTTACCTGTTTAACA GTCCG TTGCTG CGGAC TGTTTTTTTATTCAG 56 37 SFV_RS01800 NONE SFV_RS01795 NONE SFV_RS01790 338045 .. 338063 - -6 -5.2112 AATATCAGCAAAAAA CCAGCATC ATG AATACTGG ATATGAAGCATGAGA 87 133 SFV_RS01785 NONE SFV_RS01780 336862 .. 336899 - -3.4 -3.08032 TCCTGCGTAAAAGCA CAATCCTGCCGCGTGT AGCGCA ACTCGCAGAAAAATTG CATCAGAAAGCGCAG 43 246 SFV_RS01760 333044 .. 333057 - -3.9 -2.8474 CCTTATGTATAATGA TATTG CCAT CAATA TTTGTTTTTTCAGGT 46 53 SFV_RS01755 NONE SFV_RS01750 NONE SFV_RS01745 NONE SFV_RS01740 NONE SFV_RS01735 NONE SFV_RS01730 326302 .. 326341 - -6.2 -2.88544 GGTCATGGTCATACA TCTGCCCCGTGCGGCTGG TCAG CCAGCCGCTGCGGTCATA GCTGAACACCAGGCA 55 106 SFV_RS01725 325291 .. 325325 - -2.4 -2.78032 CTTGTGTTAAAACAG TGATCT-GATTATTT TTAACT AAATCATCGAGATCA GAAACTGCCACTTTG 40 136 SFV_RS01720 324740 .. 324768 - -4.5 -5.38549 GTTAAATAATAAAAA GCCGGAAAGATCT GGA AGAAATTTCCGGT TATTATCGTTGCTAT 84 52 SFV_RS01710 322953 .. 322970 - -12.7 -3.73068 CGCGTAATTGAATAA CGGAGCC GAAA GGCTCCG TTTCTTTATCCGCTA 100 42 gmhA 319639 .. 319671 - -9.8 -3.34043 GGCATCAGCGCACAA GTGCCGGATGCGGCG TAAA CGCCTTATCCGGC-C TACGCCAGACTTACT 74 36 SFV_RS01695 318341 .. 318353 - -4.1 -3.19178 ACAAAGCGATTAATA TTGGA TTC CCCAA TGCTTATGACCGTGC 47 381 SFV_RS01685 317062 .. 317093 - -10 -2.57564 GCATCCGTGCACAAC CGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACAAAATCATCTCT 70 25 SFV_RS01680 316327 .. 316358 - -10 -2.57564 GCATCTGCGCATAAC TGCCGGATGCGGCG TGAA CGCCTTATCCGGCC TACCGTTAAAGCACG 70 87 SFV_RS01670 NONE SFV_RS01665 NONE SFV_RS01660 NONE SFV_RS01655 311873 .. 311883 - -2.4 -2.87035 AAATTCAAAAACGCA TGCG AAA CGCT TCTGCCATTTTTCCA 41 4 SFV_RS01650 311357 .. 311377 - -3.1 -4.89477 TGTGGAATAAGAAAA CGCGCACAT ACT AGGCGGGCG TTATTTTCATTGCAA 72 48 SFV_RS01645 NONE prfH 309238 .. 309259 - -2.2 -5.00616 GGTCTGTTCAAAAAA CCGTATCC GGAAAT GGACATGG TTTCTATCGGGCCAA 71 201 SFV_RS01630 307170 .. 307194 - -17.9 -4.47888 TGAAGTTAAAAAGAA CAACGCCCGGC AAT GCCAGGCGTTG AAAAGATTAGCGACC 100 32 frsA NONE SFV_RS01620 305375 .. 305397 - -13.5 -2.54276 AGTTTTAATGAATAT TGCCGGATG TGATG CATCCGGCA CATTTCACTCACGCC 86 34 SFV_RS01610 NONE SFV_RS01605 303266 .. 303276 - -2.6 -3.05384 TTCTCTGCCATTCAA TTTT AGG AAAA ATGATATCAAACGAA 43 188 SFV_RS01600 NONE SFV_RS01595 300819 .. 300873 - -8.4 -3.69437 CAAGGTTAAAACTAA CCGGGCGATGCGTCAATGGCCTTGTG AAT CAAATGGCTACTTTTGCATCACCCGG TTTTATTTACGCACG 72 32 SFV_RS01590 300554 .. 300582 - -5.9 -3.5936 TCGAAATGGTTCAAA GATACGCCCACCT TTC AGCCGGGCATCTC ACCGAGCACGCGAGC 60 133 SFV_RS01490 288360 .. 288385 - -16.3 -2.57931 CCTATGGTGTATAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG 100 9 SFV_RS01480 NONE SFV_RS01475 286828 .. 286844 - -3.7 -3.80515 AAATTACAAGAAAGA TTGTGTG CTG CAAACAA GAAATATTGTAAAAA 55 117 SFV_RS01470 286020 .. 286033 - -3.1 -4.72029 TTTAAGCTAAGAAAA CGCAT TAAG ATGCA AAACGATAAAGTGCG 68 300 SFV_RS01450 NONE SFV_RS01445 NONE SFV_RS01440 NONE SFV_RS01435 NONE SFV_RS01430 NONE SFV_RS01425 NONE SFV_RS01420 NONE SFV_RS01415 NONE SFV_RS01410 279526 .. 279543 - -9.1 -4.83243 TTCAGATAAAAGAAA TCCCCGC GAGT GCGAGGA TTGTTAGTTGCTATC 90 144 SFV_RS01405 279301 .. 279314 - -9.5 -5.4505 GTCTCCAATAAAAAA CCGCC ATCA GGCGG CATGGTGTTCTTTCA 100 18 SFV_RS01400 278912 .. 278930 - -8.9 -2.55896 TTGAGCAATGAACAG GCCTCAT CGAGT ATGAGGC TGTGGTTAGTCCTTG 66 31 SFV_RS01395 277300 .. 277321 - -7.3 -2.78465 ACTGAGACACATAAG GCCTCACAA TGGC TTGCAAGGC TTTACATGTTTTGAT 58 165 SFV_RS01390 NONE SFV_RS01385 NONE SFV_RS01380 274365 .. 274381 - -3.7 -4.81843 AATAATGAAAAGAAA TCTGC ACTGATA GCAGA GGCAACGAATGTAAT 73 311 SFV_RS01260 NONE SFV_RS01255 257567 .. 257587 - -4.5 -3.91674 TTCACAGATAAAACA CTCTCCAGG AAA CCCGGGGCG GTTCAACGTTACATG 59 37 SFV_RS01170 NONE SFV_RS01165 NONE SFV_RS01160 241163 .. 241173 - -5.4 -2.89102 TACGTAAAAAGTAAC TGGT GAC ACCA TTGGTCTTATCTCAG 51 71 SFV_RS01155 239848 .. 239861 - -5.3 -2.86164 CCTGTAAGCACCAGA GCAAT AGCT ATTGC GGGCATACTGCTGAT 50 142 SFV_RS01150 NONE SFV_RS01145 238374 .. 238387 - -2.3 -2.79273 GCCTTTTAAGATAAG TCAGC CCCG GCTGG ATCCAGTCATCAGGC 40 12 SFV_RS01140 NONE SFV_RS01135 NONE SFV_RS01130 237119 .. 237136 - -10.5 -5.06414 TTGTTGCAATAAAAA GCCCCGC GAAT GCGAGGC TAAATCCTGGTGTTT 93 63 SFV_RS01125 236766 .. 236805 - -7.2 -3.45776 GCAAATCCAGTATAA GCCATTATCAAACCCACC CGTA GATAGGCTTTGTAATGGC TACTTCTTCAGAAAT 65 25 SFV_RS01110 NONE SFV_RS01105 233738 .. 233749 - -2.2 -2.92951 TACAGGTGGACAAAT CCAG CAGG CTGA TATCGCCGTGACCGG 41 165 SFV_RS01100 233054 .. 233070 - -3.7 -2.87344 CATTCGCTCTACATA CGGAT CGGGAAT ATCCG TTCCCTGCATGGCCA 46 155 SFV_RS01095 NONE SFV_RS01090 230859 .. 230876 - -4.7 -2.71712 CGCTCTCCCGCAAAT CCTGCCC GCTG AGGCTGG CGACATAAAAGGCAA 47 113 SFV_RS01085 NONE SFV_RS01080 229144 .. 229167 - -15.4 -3.9777 GCCAATATTCAGAAA GCCCGAATCA GTAA TGATTCGGGC TTTCGTCGTTTTGGT 100 121 SFV_RS01065 227615 .. 227642 - -9.1 -2.55021 AAACAAGCCACGAAT TCGCCAGGCGG TTGGAG CCACCCGGCAA TGTCGTAAACCACAG 66 43 SFV_RS01055 226120 .. 226134 - -4.2 -3.42996 GACGACCGATCATAA CGGC GAACGGA GCCG ATGACAAGAAAGTTT 52 43 mltD 224683 .. 224703 - -6.1 -5.72622 GGCATAAATAAAAAA GGCACCG GGGGAAT CGGTACC TTTTTATTATCTGGT 100 44 SFV_RS01035 221808 .. 221839 - -13.9 -4.4017 CCAATGTGCATAAAA GAATCCGGAAACA AGTGAG CGTTTCCGGATTC TTACACAGCCACTGG 100 57 SFV_RS01030 220368 .. 220397 - -10 -5.47159 GCCGAAGATAAAAAA GCGATCGCCGCA CTGGAT TGCAACGACCGC CTGGTTAGCCCGGAA 100 103 metN NONE SFV_RS00985 NONE metQ 210615 .. 210632 - -12.7 -3.75505 TTGTAAAAATGACAA GACGGGC AAGC GCCCGTC CTGAATGATATTACA 100 63 rcsF NONE SFV_RS00970 209363 .. 209381 - -11 -3.42056 AGTTGGAAGGTAGAA CAGGCTCA AGG CGAGCCTG GGACAAAAAAAGTGA 80 88 SFV_RS00965 207585 .. 207605 - -13.3 -5.10497 AATCCATGTAAAAAA GGGCCCTGA AAT TCAGGACCC TTTCTGGCATCAGCC 100 35 SFV_RS00960 206693 .. 206704 - -7.2 -3.30124 TTGTAGGCCGGATAA GGCG TTTA CGCC GCATCCGGCATTTTG 63 59 SFV_RS00940 NONE SFV_RS00935 204240 .. 204272 - -12 -3.76952 CTTAGTTAAGTGAAA GCCGGATAAGACGC ATCAA ACGTCGCATCCGGC GAAAGTCAATCAGGA 93 35 SFV_RS00830 179293 .. 179308 - -11.8 -5.15634 TATCGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATCTTATTCGTC 100 32 SFV_RS00825 NONE dapD 175689 .. 175719 - -14.8 -3.92075 ATTCTGAGCCAGAAA GCATACGGGCAGCA TCA TGCTGCCCGTATAT GTACTCTTAATCGAT 100 32 SFV_RS00815 NONE SFV_RS00795 NONE SFV_RS00790 NONE SFV_RS00785 168132 .. 168146 - -5.6 -4.68994 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGATCCGATG 75 210 SFV_RS00770 164903 .. 164925 - -19.2 -3.66288 GAGCCGTTAATAGAA TGCCTCGCCC GGT GGGCGAGGCA AAATTATCACAACTT 100 32 SFV_RS00730 NONE SFV_RS00725 NONE dksA 151555 .. 151573 - -11.7 -4.81306 TTGAACAAAAAATAA GGCGGGA GCATT TCCCGCC TGTGGTAAACGTGAT 100 54 SFV_RS00715 NONE pcnB NONE SFV_RS00705 148681 .. 148703 - -8 -4.3898 ATGATTTTCAGAAAA TATTTATATT CGT AATATAAATA AATTACCATTTGCTT 79 28 SFV_RS00695 147445 .. 147471 - -19.5 -2.79276 ATGATTTATCAATTA CCGCACCGCCA GATGA TGGCGGTGCGG TGGACTTATTAAGGG 100 34 panB NONE panC 145675 .. 145705 - -12 -3.51232 CGTGGGGTAAATTAA TAACTGGCGCCA TCAGCCG TAGCGCCAGTTA AGTATTACGCCAGCT 88 30 SFV_RS00675 144043 .. 144071 - -6.6 -2.52623 TTCGCTGGAGAAGAT GTCGCGGCTGGT GAGTA ACCAGCCGCAGG GATAACAATCAAGCA 54 34 SFV_RS00650 139516 .. 139529 - -2.4 -3.02511 TCGACTCGGGGAATA CACT GTCGAA AGTG CGTGAGATCTTAAGC 42 270 SFV_RS00640 136575 .. 136594 - -13.6 -3.36515 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTATTTCAC 100 32 SFV_RS00630 134444 .. 134465 - -10.9 -3.17362 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG 78 51 SFV_RS00625 NONE SFV_RS00620 132677 .. 132704 - -17.8 -4.59982 GCAGAAGTAAATAAA TCTGGCGGAGCC TGGG AGCTCCGCCAGA GCCGTTAAACAGCTG 100 30 SFV_RS00605 127294 .. 127310 - -6.5 -5.26875 CCGGCAATTAAAAAA GCGGC TAACCAC GCCGC TTTTTTTACGTCTGC 87 44 SFV_RS00580 118076 .. 118104 - -10.2 -2.69151 TTGGTGTAGAGATTA TTGCCCTCACCC TGTAC GGGTGAGGGCGT AGAGAGATTAATGCG 70 33 SFV_RS00565 115524 .. 115540 - -2.2 -3.54424 TGCTACTTTGGCAAA CGCC ATCAGCACA GGCG AGGGGCAAAAAACGA 47 171 SFV_RS00555 NONE SFV_RS00550 114081 .. 114091 - -2.4 -3.94634 CAGGACTTCAAACAA GGCG GTA CGAC CATAAAAACCGTGGT 53 170 SFV_RS00545 NONE SFV_RS00540 112228 .. 112244 - -7.9 -3.17075 TCTGCGGTAATCGAA TGTGCCG ATG CGGCGCA CGGTCTGGGCGGAAT 61 475 coaE NONE SFV_RS00525 NONE SFV_RS00520 NONE SFV_RS00515 109294 .. 109311 - -12.7 -4.42639 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA 100 450 SFV_RS00385 81090 .. 81107 - -14.1 -5.60993 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTTGTTTGACTG 100 50 SFV_RS00380 79471 .. 79483 - -3.3 -2.62515 AATTCTTCGACATCA CACGG TTT CCTTG TTGTTTTCGTTGTGT 42 10 SFV_RS00375 NONE SFV_RS00370 NONE leuD 76331 .. 76350 - -15 -3.64599 GGACGATAGCGGAAA GCCCGGTC ATTT GACCGGGC AAGGGGTCTAATTCA 100 33 SFV_RS00350 73017 .. 73041 - -7.2 -3.64192 AAAAAGAGTGGCAAA GGACTTGAGA AGGAG CCTCAAATCC CTTCGCCGGCGTTAT 67 138 tbpA NONE thiP NONE thiQ NONE SFV_RS00320 65865 .. 65875 - -2.4 -2.87132 TCGTGTCCTTATAGA GTCG CAA CGGC CTGGGCAGCCTGTGC 41 8 SFV_RS00315 64300 .. 64313 - -8.1 -3.50393 GTGTAGGCCAGATAA GACGC GTCA GCGTC GCATCAGGCGTTACA 67 57 araD 63396 .. 63416 - -8.3 -5.19261 AAATCCATCAAAAAA CCAGGCT TGAGTAT AGCCTGG TTTCGTTTGATTGGC 95 59 SFV_RS00305 61032 .. 61048 - -2.1 -3.63744 TTTTTGCTCAAAATA GCCCAAG TTG CCCGGTC ATAAGTGTAGCAAAA 49 1 SFV_RS00300 NONE SFV_RS00295 57192 .. 57247 - -13.3 -2.5294 TAGGCCTGATAAGAC GCGGCCCGCGTCGCATCAGGCAATCG GCGCA CAATTGCCGGATGCGGCGTGAAC-GC CTTATCCGCCTACCG 84 60 SFV_RS00285 53709 .. 53719 - -8.2 -3.35813 TTCCATTTCAATTAA CCGC ACT GCGG ATTACGTGGTAAATC 65 47 SFV_RS00280 NONE pdxA NONE ksgA NONE apaG NONE apaH 48923 .. 48936 - -2.3 -4.4572 AACACCTTAAATAAA CCCGT GATT ATGGG CCGCCATACTTGGGA 63 455 SFV_RS00210 NONE SFV_RS00205 38192 .. 38205 - -8.1 -3.30124 CCGTAGGCCTGATAA GACGC GTCA GCGTC GCATCAGGCAGCGCA 65 46 SFV_RS00200 NONE caiC NONE SFV_RS00190 NONE SFV_RS00185 33543 .. 33556 - -5.9 -2.68775 CGATGAGCAAATTTA CGCGC GCCT GCGCA ATAACAGTCGGGAAA 50 233 SFV_RS00175 32689 .. 32712 - -2.4 -4.07885 GACCTGGCGGCAAAA CTGCT-GAAAC AGG GCTTCGAGCTG GATGCGACCCACGGC 56 382 SFV_RS00160 NONE SFV_RS00155 28172 .. 28185 - -3.9 -3.65046 GCTTGATCTCAATAA TTTGT AACC ACAAA ATGTTTATTATGATG 53 63 rpsT 19792 .. 19805 - -9.5 -5.64274 GCAGGCATAAAAAAA CCCGC TTGC GCGGG CTTTTTCACAAAGCT 100 56 SFV_RS00105 NONE SFV_RS00100 NONE SFV_RS00095 17969 .. 18002 - -8.1 -2.70354 TGGTGTACAAATCCA CCACCAGAAAAACCG TTCC CGGCTTGTCTGGAAG AACGGCGACTTTTGA 57 398 SFV_RS00080 15375 .. 15392 - -12.7 -4.09739 CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC CTGGGTAAAAATAGG 100 100 SFV_RS00065 NONE SFV_RS00060 10576 .. 10586 - -4 -3.23975 ATTCCTCAAAAATCA TCAT CGA ATGA ATGGTGAAATAATTT 48 147 SFV_RS00055 9964 .. 9981 - -12.7 -5.8187 TAGCGAATAAAAAAA TCCCCCC GAGC GGGGGGA TCTCAAGACAATTAG 100 37 SFV_RS00040 NONE SFV_RS00035 5538 .. 5557 - -7.8 -4.13654 CCGCTAAATGACAAA TGCCGGGT AACA ATCCGGCA TTCAGCGCCTGATGC 74 150