locus-tag	class	description
CPZ98_RS00005	COG0860	N-Acetylmuramoyl-L-alanine amidase
CPZ98_RS00020	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
CPZ98_RS00025	COG4816	utilization protein
CPZ98_RS00070	COG0076	glutamate decarboxylase activity
CPZ98_RS00075	COG0076	glutamate decarboxylase activity
CPZ98_RS00080	COG0531	amino acid
CPZ98_RS00085	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CPZ98_RS00095	COG4819	ethanolamine utilization protein
CPZ98_RS00100	COG4917	ethanolamine utilization protein
CPZ98_RS00110	COG0280	phosphate acetyltransferase
CPZ98_RS00110	COG0281	malic enzyme
CPZ98_RS00120	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CPZ98_RS00125	COG5342	invasion associated locus B
CPZ98_RS00135	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CPZ98_RS00135	COG0493	'glutamate synthase
CPZ98_RS00145	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CPZ98_RS00160	COG1393	Belongs to the ArsC family
CPZ98_RS00175	COG0400	carboxylic ester hydrolase activity
CPZ98_RS00185	COG2321	neutral zinc metallopeptidase
CPZ98_RS00195	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
CPZ98_RS00205	COG2716	regulation of RNA biosynthetic process
CPZ98_RS00210	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
CPZ98_RS00215	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CPZ98_RS00225	COG0650	Formate hydrogenlyase subunit 4
CPZ98_RS00230	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CPZ98_RS00235	COG4237	Hydrogenase 4 membrane
CPZ98_RS00240	COG0651	ATP synthesis coupled electron transport
CPZ98_RS00250	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CPZ98_RS00255	COG3260	NADH ubiquinone oxidoreductase 20
CPZ98_RS00265	COG3604	Transcriptional regulator
CPZ98_RS00275	COG0628	permease
CPZ98_RS00280	COG4783	chaperone-mediated protein folding
CPZ98_RS00285	COG1393	Belongs to the ArsC family
CPZ98_RS00295	COG2233	PERMEase
CPZ98_RS00310	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
CPZ98_RS00315	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
CPZ98_RS00320	COG0248	Ppx GppA phosphatase
CPZ98_RS00345	COG3133	Outer membrane lipoprotein
CPZ98_RS00360	COG0517	IMP dehydrogenase activity
CPZ98_RS00360	COG0516	GMP reductase activity
CPZ98_RS00370	COG1645	bacterial-type flagellum-dependent swarming motility
CPZ98_RS00385	COG2976	Protein conserved in bacteria
CPZ98_RS00415	COG4953	penicillin-binding protein 1C
CPZ98_RS00420	COG3547	Transposase (IS116 IS110 IS902 family)
CPZ98_RS00440	COG2975	iron-sulfur cluster assembly
CPZ98_RS00445	COG0633	Ferredoxin
CPZ98_RS00465	COG0822	iron-sulfur transferase activity
CPZ98_RS00485	COG0483	inositol monophosphate 1-phosphatase activity
CPZ98_RS00490	COG1073	alpha beta
CPZ98_RS00495	COG3711	transcriptional antiterminator
CPZ98_RS00500	COG2814	Major facilitator Superfamily
CPZ98_RS00505	COG0583	DNA-binding transcription factor activity
CPZ98_RS00535	COG2259	Doxx family
CPZ98_RS00540	COG2017	converts alpha-aldose to the beta-anomer
CPZ98_RS00545	COG1063	alcohol dehydrogenase
CPZ98_RS00550	COG1172	Belongs to the binding-protein-dependent transport system permease family
CPZ98_RS00555	COG1129	ABC transporter
CPZ98_RS00560	COG1879	ABC-type sugar transport system periplasmic component
CPZ98_RS00565	COG0457	Tetratricopeptide repeat
CPZ98_RS00585	COG0347	Belongs to the P(II) protein family
CPZ98_RS00590	COG2204	response regulator
CPZ98_RS00595	COG3170	Tfp pilus assembly protein FimV
CPZ98_RS00600	COG2205	protein histidine kinase activity
CPZ98_RS00620	COG0560	Phosphoserine phosphatase
CPZ98_RS00625	COG1737	Transcriptional regulator
CPZ98_RS00660	COG5301	cellulose 1,4-beta-cellobiosidase activity
CPZ98_RS00705	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CPZ98_RS00740	COG0681	Belongs to the peptidase S26 family
CPZ98_RS00750	COG3086	response to oxidative stress
CPZ98_RS00755	COG3026	antisigma factor binding
CPZ98_RS00760	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
CPZ98_RS00765	COG1595	DNA-templated transcription, initiation
CPZ98_RS00785	COG0513	Belongs to the DEAD box helicase family
CPZ98_RS00790	COG0583	DNA-binding transcription factor activity
CPZ98_RS00810	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CPZ98_RS00815	COG3118	belongs to the thioredoxin family
CPZ98_RS00820	COG3148	PFAM DTW domain containing protein
CPZ98_RS00825	COG0045	succinate-CoA ligase (ADP-forming) activity
CPZ98_RS00825	COG1042	CoA-binding domain protein
CPZ98_RS00825	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CPZ98_RS00830	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CPZ98_RS00835	COG5544	Lipoprotein
CPZ98_RS00840	COG0477	Major facilitator Superfamily
CPZ98_RS00870	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CPZ98_RS00875	COG0564	pseudouridine synthase activity
CPZ98_RS00885	COG0542	response to heat
CPZ98_RS00895	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CPZ98_RS00905	COG1605	Chorismate mutase
CPZ98_RS00905	COG0077	Prephenate dehydratase
CPZ98_RS00910	COG1605	Chorismate mutase
CPZ98_RS00910	COG0287	Prephenate dehydrogenase
CPZ98_RS00915	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CPZ98_RS00935	COG2885	chlorophyll binding
CPZ98_RS00960	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
CPZ98_RS00965	COG4137	Cytochrome C assembly protein
CPZ98_RS00970	COG4536	flavin adenine dinucleotide binding
CPZ98_RS00990	COG0497	DNA recombination
CPZ98_RS00995	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CPZ98_RS01005	COG2867	negative regulation of translational initiation
CPZ98_RS01020	COG0582	viral genome integration into host DNA
CPZ98_RS01040	COG0366	Alpha amylase catalytic
CPZ98_RS01050	COG0579	oxidoreductase
CPZ98_RS01060	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CPZ98_RS01065	COG1113	amino acid transport
CPZ98_RS01070	COG1802	Transcriptional regulator
CPZ98_RS01075	COG1652	LysM domain
CPZ98_RS01080	COG0401	homolog of Blt101
CPZ98_RS01090	COG0640	Transcriptional regulator
CPZ98_RS01095	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CPZ98_RS01100	COG2916	Histone family protein nucleoid-structuring protein H-NS
CPZ98_RS01120	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CPZ98_RS01130	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CPZ98_RS01135	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CPZ98_RS01140	COG4175	Glycine betaine
CPZ98_RS01145	COG4176	ABC-type proline glycine betaine transport system permease component
CPZ98_RS01150	COG2113	Glycine betaine
CPZ98_RS01160	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
CPZ98_RS01170	COG1846	Transcriptional regulator
CPZ98_RS01180	COG2814	Major facilitator Superfamily
CPZ98_RS01195	COG1238	metal cluster binding
CPZ98_RS01200	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CPZ98_RS01230	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
CPZ98_RS01250	COG1546	Belongs to the CinA family
CPZ98_RS01255	COG2951	lytic endotransglycosylase activity
CPZ98_RS01265	COG3732	PTS system glucitol sorbitol-specific
CPZ98_RS01275	COG1028	Short-chain dehydrogenase reductase Sdr
CPZ98_RS01285	COG1349	DNA-binding transcription factor activity
CPZ98_RS01310	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
CPZ98_RS01315	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CPZ98_RS01320	COG1609	Transcriptional regulator
CPZ98_RS01325	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CPZ98_RS01330	COG3261	NADH dehydrogenase
CPZ98_RS01330	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
CPZ98_RS01335	COG0650	Formate hydrogenlyase subunit 4
CPZ98_RS01340	COG0651	ATP synthesis coupled electron transport
CPZ98_RS01345	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CPZ98_RS01360	COG0375	protein maturation
CPZ98_RS01365	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
CPZ98_RS01370	COG0298	carbon dioxide binding
CPZ98_RS01375	COG0409	Hydrogenase expression formation protein
CPZ98_RS01380	COG0309	Hydrogenase expression formation protein (HypE)
CPZ98_RS01385	COG3604	Transcriptional regulator
CPZ98_RS01420	COG2084	Dehydrogenase
CPZ98_RS01440	COG3423	Transcriptional regulator
CPZ98_RS01470	COG4942	peptidase
CPZ98_RS01470	COG1388	LysM domain
CPZ98_RS01530	COG2234	aminopeptidase activity
CPZ98_RS01565	COG0720	synthase
CPZ98_RS01570	COG0644	oxidoreductase
CPZ98_RS01575	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
CPZ98_RS01585	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
CPZ98_RS01590	COG2086	electron transfer activity
CPZ98_RS01595	COG0477	Major facilitator Superfamily
CPZ98_RS01600	COG0277	FAD linked oxidase domain protein
CPZ98_RS01610	COG0602	queuosine metabolic process
CPZ98_RS01630	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
CPZ98_RS01645	COG3956	TIGRFAM MazG family protein
CPZ98_RS01650	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CPZ98_RS01665	COG4948	Mandelate Racemase Muconate Lactonizing
CPZ98_RS01670	COG4948	Mandelate Racemase Muconate Lactonizing
CPZ98_RS01675	COG2271	Major facilitator Superfamily
CPZ98_RS01680	COG0716	FMN binding
CPZ98_RS01685	COG0564	pseudouridine synthase activity
CPZ98_RS01690	COG3098	single-species biofilm formation
CPZ98_RS01705	COG1611	Belongs to the LOG family
CPZ98_RS01710	COG3385	transposase activity
CPZ98_RS01715	COG0814	amino acid
CPZ98_RS01720	COG1760	l-serine dehydratase
CPZ98_RS01730	COG1454	alcohol dehydrogenase
CPZ98_RS01735	COG0235	Class ii aldolase
CPZ98_RS01740	COG0738	Major facilitator superfamily
CPZ98_RS01760	COG1349	DNA-binding transcription factor activity
CPZ98_RS01770	COG2363	Small membrane protein
CPZ98_RS01775	COG0583	DNA-binding transcription factor activity
CPZ98_RS01785	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
CPZ98_RS01790	COG2166	iron-sulfur cluster assembly
CPZ98_RS01795	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
CPZ98_RS01800	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
CPZ98_RS01815	COG0860	N-Acetylmuramoyl-L-alanine amidase
CPZ98_RS01825	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
CPZ98_RS01830	COG1074	ATP-dependent DNA helicase activity
CPZ98_RS01840	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
CPZ98_RS01845	COG4967	type IV pilus modification protein PilV
CPZ98_RS01855	COG4795	General secretion pathway protein
CPZ98_RS01875	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
CPZ98_RS01895	COG0861	Integral membrane protein TerC family
CPZ98_RS01905	COG0667	Aldo Keto reductase
CPZ98_RS01920	COG1609	Transcriptional regulator
CPZ98_RS01930	COG0583	DNA-binding transcription factor activity
CPZ98_RS01935	COG1794	racemase activity, acting on amino acids and derivatives
CPZ98_RS01940	COG2814	Major facilitator Superfamily
CPZ98_RS01945	COG1028	Short-chain dehydrogenase reductase Sdr
CPZ98_RS01955	COG0183	Belongs to the thiolase family
CPZ98_RS01960	COG0814	amino acid
CPZ98_RS02010	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
CPZ98_RS02015	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CPZ98_RS02025	COG0716	FMN binding
CPZ98_RS02045	COG1272	protein, Hemolysin III
CPZ98_RS02055	COG2723	6-phospho-beta-galactosidase activity
CPZ98_RS02085	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CPZ98_RS02090	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CPZ98_RS02095	COG0006	proline dipeptidase activity
CPZ98_RS02115	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
CPZ98_RS02130	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
CPZ98_RS02145	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CPZ98_RS02145	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
CPZ98_RS02150	COG1703	isobutyryl-CoA mutase activity
CPZ98_RS02155	COG1024	Enoyl-CoA hydratase
CPZ98_RS02160	COG0427	acetyl-CoA hydrolase
CPZ98_RS02165	COG0583	DNA-binding transcription factor activity
CPZ98_RS02170	COG2968	Membrane
CPZ98_RS02180	COG0668	transmembrane transport
CPZ98_RS02185	COG0191	fructose-bisphosphate aldolase activity
CPZ98_RS02220	COG1122	ATPase activity
CPZ98_RS02230	COG1072	(Pantothenic acid kinase))
CPZ98_RS02240	COG1494	fructose-1,6-bisphosphatase
CPZ98_RS02245	COG1063	alcohol dehydrogenase
CPZ98_RS02260	COG0330	HflC and HflK could
CPZ98_RS02265	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
CPZ98_RS02270	COG0501	Belongs to the peptidase M48B family
CPZ98_RS02315	COG2814	Major facilitator Superfamily
CPZ98_RS02325	COG2356	endonuclease I
CPZ98_RS02330	COG1385	rRNA (uridine-N3-)-methyltransferase activity
CPZ98_RS02350	COG2805	Type II/IV secretion system protein
CPZ98_RS02355	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
CPZ98_RS02360	COG0762	integral membrane protein
CPZ98_RS02375	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CPZ98_RS02385	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
CPZ98_RS02405	COG0252	asparaginase activity
CPZ98_RS02415	COG3171	Protein conserved in bacteria
CPZ98_RS02425	COG1194	a g-specific adenine glycosylase
CPZ98_RS02440	COG2211	Major facilitator Superfamily
CPZ98_RS02445	COG1982	Orn Lys Arg decarboxylase major
CPZ98_RS02450	COG1811	Na channel or pump
CPZ98_RS02495	COG1620	l-lactate permease
CPZ98_RS02505	COG3193	protein, possibly involved in utilization of glycolate and propanediol
CPZ98_RS02515	COG0277	FAD linked oxidase domain protein
CPZ98_RS02525	COG2186	Transcriptional regulator
CPZ98_RS02535	COG0318	PFAM AMP-dependent synthetase and ligase
CPZ98_RS02545	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
CPZ98_RS02560	COG0795	lipopolysaccharide-transporting ATPase activity
CPZ98_RS02565	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CPZ98_RS02575	COG2244	polysaccharide biosynthetic process
CPZ98_RS02580	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CPZ98_RS02585	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CPZ98_RS02590	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
CPZ98_RS02595	COG0306	phosphate transporter
CPZ98_RS02600	COG0754	glutathionylspermidine amidase activity
CPZ98_RS02605	COG0625	glutathione transferase activity
CPZ98_RS02610	COG0298	carbon dioxide binding
CPZ98_RS02620	COG1773	rubredoxin
CPZ98_RS02625	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CPZ98_RS02630	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
CPZ98_RS02635	COG5557	Pfam Polysulphide reductase, NrfD
CPZ98_RS02640	COG0437	4 iron, 4 sulfur cluster binding
CPZ98_RS02645	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CPZ98_RS02660	COG0667	Aldo Keto reductase
CPZ98_RS02670	COG1028	Short-chain dehydrogenase reductase Sdr
CPZ98_RS02675	COG0848	biopolymer transport protein
CPZ98_RS02680	COG0811	peptide transport
CPZ98_RS02685	COG0626	cystathionine gamma-synthase activity
CPZ98_RS02690	COG0586	Pfam SNARE associated Golgi protein
CPZ98_RS02695	COG2207	Transcriptional regulator
CPZ98_RS02700	COG1979	alcohol dehydrogenase
CPZ98_RS02705	COG0656	L-ascorbic acid biosynthetic process
CPZ98_RS02715	COG4238	major outer membrane lipoprotein
CPZ98_RS02725	COG2132	Multicopper oxidase
CPZ98_RS02730	COG0204	Acyl-transferase
CPZ98_RS02735	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CPZ98_RS02740	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CPZ98_RS02745	COG3111	PFAM Bacterial OB fold (BOF) protein
CPZ98_RS02750	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS02755	COG0642	Histidine kinase
CPZ98_RS02765	COG2249	NAD(P)H dehydrogenase (quinone) activity
CPZ98_RS02770	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
CPZ98_RS02775	COG0187	DNA topoisomerase II activity
CPZ98_RS02780	COG3150	esterase
CPZ98_RS02785	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
CPZ98_RS02790	COG3151	Protein conserved in bacteria
CPZ98_RS02795	COG0494	nUDIX hydrolase
CPZ98_RS02800	COG1538	Outer membrane efflux protein
CPZ98_RS02810	COG0754	glutathionylspermidine amidase activity
CPZ98_RS02815	COG3384	dioxygenase
CPZ98_RS02830	COG2960	long-chain fatty acid transporting porin activity
CPZ98_RS02855	COG2268	Band 7 protein
CPZ98_RS02880	COG3025	triphosphatase activity
CPZ98_RS02885	COG4991	sh3 domain protein
CPZ98_RS02900	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CPZ98_RS02930	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CPZ98_RS02945	COG0828	Belongs to the bacterial ribosomal protein bS21 family
CPZ98_RS02950	COG0358	DNA primase activity
CPZ98_RS02955	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CPZ98_RS02960	COG3385	transposase activity
CPZ98_RS02980	COG1695	Transcriptional regulator
CPZ98_RS03000	COG1609	Transcriptional regulator
CPZ98_RS03005	COG3250	beta-galactosidase activity
CPZ98_RS03010	COG2731	YhcH YjgK YiaL family protein
CPZ98_RS03015	COG0531	amino acid
CPZ98_RS03030	COG1902	pentaerythritol trinitrate reductase activity
CPZ98_RS03030	COG0446	pyridine nucleotide-disulphide oxidoreductase
CPZ98_RS03035	COG5499	transcription regulator containing HTH domain
CPZ98_RS03040	COG4680	protein conserved in bacteria
CPZ98_RS03050	COG1451	nucleotide metabolic process
CPZ98_RS03055	COG2949	membrane
CPZ98_RS03060	COG0673	inositol 2-dehydrogenase activity
CPZ98_RS03065	COG0861	Integral membrane protein TerC family
CPZ98_RS03080	COG2721	sulfolactate sulfo-lyase activity
CPZ98_RS03090	COG2271	Major facilitator Superfamily
CPZ98_RS03110	COG2186	Transcriptional regulator
CPZ98_RS03115	COG0586	Pfam SNARE associated Golgi protein
CPZ98_RS03130	COG4575	ribosome binding
CPZ98_RS03135	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
CPZ98_RS03145	COG2259	Doxx family
CPZ98_RS03150	COG0435	Glutathione S-transferase
CPZ98_RS03155	COG3152	Membrane
CPZ98_RS03165	COG0583	DNA-binding transcription factor activity
CPZ98_RS03170	COG1741	Belongs to the pirin family
CPZ98_RS03185	COG0814	amino acid
CPZ98_RS03190	COG1760	l-serine dehydratase
CPZ98_RS03195	COG0251	oxidation-reduction process
CPZ98_RS03200	COG1882	Formate acetyltransferase
CPZ98_RS03205	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CPZ98_RS03215	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CPZ98_RS03220	COG0583	DNA-binding transcription factor activity
CPZ98_RS03255	COG2084	Dehydrogenase
CPZ98_RS03265	COG2271	Major facilitator Superfamily
CPZ98_RS03270	COG2721	sulfolactate sulfo-lyase activity
CPZ98_RS03275	COG1349	DNA-binding transcription factor activity
CPZ98_RS03285	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPZ98_RS03295	COG3716	PTS system mannose fructose sorbose family IID component
CPZ98_RS03300	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPZ98_RS03330	COG3539	Fimbrial protein
CPZ98_RS03335	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
CPZ98_RS03355	COG2823	Periplasmic or secreted lipoprotein
CPZ98_RS03360	COG0701	Predicted permease
CPZ98_RS03365	COG0702	epimerase
CPZ98_RS03370	COG0693	protein deglycase activity
CPZ98_RS03385	COG3153	acetyltransferase
CPZ98_RS03390	COG3154	lipid carrier protein
CPZ98_RS03395	COG0826	peptidase U32
CPZ98_RS03400	COG0826	peptidase U32
CPZ98_RS03405	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
CPZ98_RS03410	COG0814	amino acid
CPZ98_RS03415	COG0513	Belongs to the DEAD box helicase family
CPZ98_RS03455	COG0195	Participates in both transcription termination and antitermination
CPZ98_RS03485	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CPZ98_RS03495	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
CPZ98_RS03500	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
CPZ98_RS03510	COG1534	Rna-binding protein
CPZ98_RS03515	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CPZ98_RS03520	COG2027	D-alanyl-D-alanine carboxypeptidase
CPZ98_RS03530	COG0697	spore germination
CPZ98_RS03545	COG0142	geranyltranstransferase activity
CPZ98_RS03550	COG3423	Transcriptional regulator
CPZ98_RS03560	COG5007	Belongs to the BolA IbaG family
CPZ98_RS03565	COG3113	response to antibiotic
CPZ98_RS03570	COG2854	intermembrane phospholipid transfer
CPZ98_RS03575	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CPZ98_RS03580	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
CPZ98_RS03585	COG1127	ABC transporter
CPZ98_RS03590	COG0530	calcium, potassium:sodium antiporter activity
CPZ98_RS03600	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
CPZ98_RS03605	COG3117	lipopolysaccharide transmembrane transporter activity
CPZ98_RS03610	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
CPZ98_RS03615	COG1137	ATPase activity
CPZ98_RS03620	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
CPZ98_RS03625	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
CPZ98_RS03640	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPZ98_RS03645	COG0515	serine threonine protein kinase
CPZ98_RS03655	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
CPZ98_RS03660	COG5002	protein histidine kinase activity
CPZ98_RS03660	COG2198	Histidine kinase
CPZ98_RS03660	COG0784	Response regulator, receiver
CPZ98_RS03665	COG1242	4 iron, 4 sulfur cluster binding
CPZ98_RS03670	COG0070	glutamate synthase
CPZ98_RS03670	COG0067	glutamate synthase
CPZ98_RS03670	COG0069	glutamate synthase activity
CPZ98_RS03675	COG0493	'glutamate synthase
CPZ98_RS03680	COG4804	nuclease activity
CPZ98_RS03695	COG2731	YhcH YjgK YiaL family protein
CPZ98_RS03735	COG3069	C4-dicarboxylate transmembrane transporter activity
CPZ98_RS03740	COG2969	positive regulation of protein catabolic process
CPZ98_RS03745	COG0625	glutathione transferase activity
CPZ98_RS03760	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
CPZ98_RS03765	COG3105	Protein conserved in bacteria
CPZ98_RS03775	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CPZ98_RS03795	COG2732	(Barnase) inhibitor
CPZ98_RS03815	COG0583	DNA-binding transcription factor activity
CPZ98_RS03820	COG0312	modulator of DNA gyrase
CPZ98_RS03825	COG3164	Protein of unknown function
CPZ98_RS03830	COG1530	ribonuclease E activity
CPZ98_RS03840	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
CPZ98_RS03845	COG1792	Involved in formation and maintenance of cell shape
CPZ98_RS03850	COG1077	Cell shape determining protein MreB Mrl
CPZ98_RS03860	COG2199	diguanylate cyclase activity
CPZ98_RS03860	COG2200	EAL domain
CPZ98_RS03865	COG0604	alcohol dehydrogenase
CPZ98_RS03870	COG0511	ligase activity, forming carbon-carbon bonds
CPZ98_RS03875	COG0439	Biotin carboxylase
CPZ98_RS03880	COG3924	membrane
CPZ98_RS03885	COG4145	pantothenate transmembrane transporter activity
CPZ98_RS03905	COG2189	Belongs to the N(4) N(6)-methyltransferase family
CPZ98_RS03920	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPZ98_RS03940	COG0765	amino acid transport
CPZ98_RS03945	COG1126	abc transporter atp-binding protein
CPZ98_RS03985	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CPZ98_RS04005	COG0551	DNA topoisomerase type I activity
CPZ98_RS04015	COG0758	DNA mediated transformation
CPZ98_RS04035	COG0569	domain protein
CPZ98_RS04045	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS04050	COG4372	Transposase
CPZ98_RS04090	COG0201	protein transport
CPZ98_RS04180	COG0089	rRNA binding
CPZ98_RS04250	COG2964	Protein conserved in bacteria
CPZ98_RS04255	COG0545	Peptidyl-prolyl cis-trans isomerase
CPZ98_RS04265	COG1047	Peptidyl-prolyl cis-trans
CPZ98_RS04270	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
CPZ98_RS04285	COG0488	(ABC) transporter
CPZ98_RS04290	COG0429	hydrolase of the alpha beta-hydrolase fold
CPZ98_RS04300	COG3954	Phosphoribulokinase
CPZ98_RS04305	COG1765	OsmC-like protein
CPZ98_RS04310	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CPZ98_RS04315	COG1289	transmembrane transporter activity
CPZ98_RS04325	COG0512	Glutamine amidotransferase of anthranilate synthase
CPZ98_RS04330	COG2184	nucleotidyltransferase activity
CPZ98_RS04340	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CPZ98_RS04355	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
CPZ98_RS04360	COG2146	nitrite reductase [NAD(P)H] activity
CPZ98_RS04365	COG2116	formate transmembrane transporter activity
CPZ98_RS04385	COG2222	sugar isomerase
CPZ98_RS04390	COG1082	Xylose isomerase domain protein TIM barrel
CPZ98_RS04405	COG0626	cystathionine gamma-synthase activity
CPZ98_RS04420	COG1735	metal-dependent hydrolase with the TIM-barrel fold
CPZ98_RS04425	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
CPZ98_RS04430	COG3457	Alanine racemase
CPZ98_RS04440	COG2188	Transcriptional regulator
CPZ98_RS04455	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
CPZ98_RS04460	COG0338	D12 class N6 adenine-specific DNA methyltransferase
CPZ98_RS04465	COG3266	domain, Protein
CPZ98_RS04480	COG4796	Type ii and iii secretion system protein
CPZ98_RS04495	COG3166	PFAM Fimbrial assembly family protein
CPZ98_RS04500	COG4972	Pilus assembly protein
CPZ98_RS04505	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
CPZ98_RS04510	COG0494	nUDIX hydrolase
CPZ98_RS04520	COG1011	Hydrolase
CPZ98_RS04525	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
CPZ98_RS04535	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
CPZ98_RS04555	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CPZ98_RS04560	COG2183	response to ionizing radiation
CPZ98_RS04565	COG1918	ferrous iron import across plasma membrane
CPZ98_RS04580	COG5464	transposase or invertase
CPZ98_RS04615	COG2610	gluconate transmembrane transporter activity
CPZ98_RS04620	COG1640	4-alpha-glucanotransferase
CPZ98_RS04625	COG0058	SHG alpha-glucan phosphorylase activity
CPZ98_RS04640	COG1690	Belongs to the RtcB family
CPZ98_RS04645	COG4650	regulator
CPZ98_RS04650	COG1349	DNA-binding transcription factor activity
CPZ98_RS04665	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CPZ98_RS04675	COG3385	transposase activity
CPZ98_RS04680	COG0058	SHG alpha-glucan phosphorylase activity
CPZ98_RS04705	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CPZ98_RS04710	COG2095	MarC family integral membrane protein
CPZ98_RS04715	COG2610	gluconate transmembrane transporter activity
CPZ98_RS04720	COG3265	gluconokinase activity
CPZ98_RS04725	COG1609	Transcriptional regulator
CPZ98_RS04730	COG1741	Belongs to the pirin family
CPZ98_RS04735	COG0673	inositol 2-dehydrogenase activity
CPZ98_RS04740	COG1247	-acetyltransferase
CPZ98_RS04745	COG0405	Gamma-glutamyltransferase
CPZ98_RS04755	COG0584	glycerophosphoryl diester phosphodiesterase
CPZ98_RS04780	COG0410	ABC transporter
CPZ98_RS04785	COG0411	ABC transporter
CPZ98_RS04790	COG4177	L-phenylalanine transmembrane transporter activity
CPZ98_RS04795	COG0559	Belongs to the binding-protein-dependent transport system permease family
CPZ98_RS04800	COG0683	leucine binding
CPZ98_RS04805	COG0456	acetyltransferase
CPZ98_RS04810	COG0683	leucine binding
CPZ98_RS04815	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
CPZ98_RS04820	COG2177	Part of the ABC transporter FtsEX involved in
CPZ98_RS04825	COG2884	Cell division ATP-binding protein ftsE
CPZ98_RS04830	COG0552	protein localization to endoplasmic reticulum
CPZ98_RS04835	COG0742	ribosomal rna small subunit methyltransferase
CPZ98_RS04840	COG3776	membrane
CPZ98_RS04850	COG3714	YhhN family
CPZ98_RS04865	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
CPZ98_RS04880	COG0628	permease
CPZ98_RS04885	COG2091	lysine biosynthetic process via aminoadipic acid
CPZ98_RS04890	COG0747	negative chemotaxis
CPZ98_RS04895	COG0601	transmembrane transport
CPZ98_RS04900	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CPZ98_RS04930	COG0842	Transport permease protein
CPZ98_RS04935	COG0842	Transport permease protein
CPZ98_RS04935	COG1129	ABC transporter
CPZ98_RS04940	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CPZ98_RS05045	COG2081	HI0933 family
CPZ98_RS05050	COG0306	phosphate transporter
CPZ98_RS05060	COG0589	response to stress
CPZ98_RS05080	COG0339	signal peptide processing
CPZ98_RS05085	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
CPZ98_RS05090	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CPZ98_RS05100	COG0640	Transcriptional regulator
CPZ98_RS05105	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CPZ98_RS05110	COG1393	Belongs to the ArsC family
CPZ98_RS05130	COG3065	identical protein binding
CPZ98_RS05165	COG3247	response to pH
CPZ98_RS05170	COG2771	luxR family
CPZ98_RS05180	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CPZ98_RS05200	COG3385	transposase activity
CPZ98_RS05205	COG2197	response regulator
CPZ98_RS05210	COG0583	DNA-binding transcription factor activity
CPZ98_RS05215	COG1295	ribonuclease BN
CPZ98_RS05220	COG0477	Major facilitator Superfamily
CPZ98_RS05225	COG2982	Protein involved in outer membrane biogenesis
CPZ98_RS05230	COG2200	EAL domain
CPZ98_RS05240	COG0612	Peptidase, M16
CPZ98_RS05250	COG2200	EAL domain
CPZ98_RS05250	COG2199	diguanylate cyclase activity
CPZ98_RS05270	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
CPZ98_RS05275	COG1215	transferase activity, transferring glycosyl groups
CPZ98_RS05285	COG1215	transferase activity, transferring glycosyl groups
CPZ98_RS05310	COG2194	sulfuric ester hydrolase activity
CPZ98_RS05350	COG0814	amino acid
CPZ98_RS05355	COG4608	Belongs to the ABC transporter superfamily
CPZ98_RS05360	COG0444	Belongs to the ABC transporter superfamily
CPZ98_RS05365	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CPZ98_RS05370	COG0601	transmembrane transport
CPZ98_RS05375	COG0747	negative chemotaxis
CPZ98_RS05385	COG2194	sulfuric ester hydrolase activity
CPZ98_RS05390	COG2223	nitrite transmembrane transporter activity
CPZ98_RS05395	COG5571	outer membrane autotransporter
CPZ98_RS05400	COG2818	Glycosylase
CPZ98_RS05405	COG0456	acetyltransferase
CPZ98_RS05410	COG0243	molybdopterin cofactor binding
CPZ98_RS05415	COG2885	chlorophyll binding
CPZ98_RS05435	COG1278	Cold shock
CPZ98_RS05455	COG1858	cytochrome C peroxidase
CPZ98_RS05470	COG2207	Transcriptional regulator
CPZ98_RS05505	COG3274	enterobacterial common antigen metabolic process
CPZ98_RS05510	COG4682	membrane
CPZ98_RS05515	COG4682	membrane
CPZ98_RS05520	COG1070	Carbohydrate kinase
CPZ98_RS05530	COG4213	ABC transporter substrate-binding protein
CPZ98_RS05540	COG4214	carbohydrate transport
CPZ98_RS05550	COG2992	FlgJ-related protein
CPZ98_RS05555	COG0366	Alpha amylase catalytic
CPZ98_RS05560	COG3977	Valine--pyruvate aminotransferase
CPZ98_RS05565	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
CPZ98_RS05570	COG1414	Transcriptional regulator
CPZ98_RS05605	COG1566	PFAM secretion protein HlyD family protein
CPZ98_RS05620	COG1012	belongs to the aldehyde dehydrogenase family
CPZ98_RS05625	COG1454	alcohol dehydrogenase
CPZ98_RS05630	COG3276	selenocysteine insertion sequence binding
CPZ98_RS05640	COG0625	glutathione transferase activity
CPZ98_RS05645	COG1566	PFAM secretion protein HlyD family protein
CPZ98_RS05655	COG2213	PTS system mannitol-specific
CPZ98_RS05655	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPZ98_RS05665	COG3722	fumarate hydratase activity
CPZ98_RS05695	COG1620	l-lactate permease
CPZ98_RS05700	COG2186	Transcriptional regulator
CPZ98_RS05710	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
CPZ98_RS05715	COG1045	serine acetyltransferase
CPZ98_RS05730	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CPZ98_RS05735	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CPZ98_RS05750	COG4942	peptidase
CPZ98_RS05755	COG2861	carbohydrate metabolic process
CPZ98_RS05775	COG0156	8-amino-7-oxononanoate synthase activity
CPZ98_RS05790	COG0859	PFAM glycosyl transferase family 9
CPZ98_RS05795	COG0859	PFAM glycosyl transferase family 9
CPZ98_RS05815	COG3642	lipopolysaccharide core region biosynthetic process
CPZ98_RS05825	COG0515	serine threonine protein kinase
CPZ98_RS05830	COG0438	transferase activity, transferring glycosyl groups
CPZ98_RS05835	COG0859	PFAM glycosyl transferase family 9
CPZ98_RS05845	COG1519	Transferase
CPZ98_RS05875	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
CPZ98_RS05900	COG1561	YicC-like family, N-terminal region
CPZ98_RS05910	COG3645	SOS response
CPZ98_RS05915	COG2860	membrane
CPZ98_RS05925	COG0194	GDP metabolic process
CPZ98_RS05935	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
CPZ98_RS05940	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CPZ98_RS05945	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
CPZ98_RS05950	COG0786	glutamate:sodium symporter activity
CPZ98_RS05955	COG2233	PERMEase
CPZ98_RS05960	COG2982	Protein involved in outer membrane biogenesis
CPZ98_RS05965	COG1501	Belongs to the glycosyl hydrolase 31 family
CPZ98_RS05980	COG0582	viral genome integration into host DNA
CPZ98_RS06130	COG2252	PERMEase
CPZ98_RS06140	COG2271	Major facilitator Superfamily
CPZ98_RS06145	COG2271	Major facilitator Superfamily
CPZ98_RS06150	COG3851	Histidine kinase
CPZ98_RS06155	COG2197	response regulator
CPZ98_RS06160	COG0440	acetolactate synthase activity
CPZ98_RS06165	COG0028	Belongs to the TPP enzyme family
CPZ98_RS06180	COG2814	Major facilitator Superfamily
CPZ98_RS06185	COG0641	radical SAM
CPZ98_RS06195	COG2149	membrane
CPZ98_RS06210	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
CPZ98_RS06215	COG2207	Transcriptional regulator
CPZ98_RS06230	COG2188	Transcriptional regulator
CPZ98_RS06250	COG5645	(Lipo)protein
CPZ98_RS06255	COG0823	Involved in the tonB-independent uptake of proteins
CPZ98_RS06265	COG2271	Major facilitator Superfamily
CPZ98_RS06275	COG0800	Aldolase
CPZ98_RS06280	COG3734	2-keto-3-deoxy-galactonokinase
CPZ98_RS06285	COG2186	Transcriptional regulator
CPZ98_RS06295	COG0561	phosphatase activity
CPZ98_RS06300	COG3753	Protein conserved in bacteria
CPZ98_RS06305	COG0187	DNA topoisomerase II activity
CPZ98_RS06315	COG0592	DNA-directed DNA polymerase activity
CPZ98_RS06370	COG0814	amino acid
CPZ98_RS06395	COG2091	lysine biosynthetic process via aminoadipic acid
CPZ98_RS06400	COG0431	NADPH-dependent FMN reductase
CPZ98_RS06405	COG2252	PERMEase
CPZ98_RS06410	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CPZ98_RS06425	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS06430	COG4372	Transposase
CPZ98_RS06435	COG3196	Protein conserved in bacteria
CPZ98_RS06440	COG0363	glucosamine-6-phosphate deaminase activity
CPZ98_RS06455	COG2723	6-phospho-beta-galactosidase activity
CPZ98_RS06460	COG1263	PTS System
CPZ98_RS06460	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPZ98_RS06460	COG2190	(PTS) system
CPZ98_RS06465	COG3711	transcriptional antiterminator
CPZ98_RS06470	COG0704	Plays a role in the regulation of phosphate uptake
CPZ98_RS06475	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
CPZ98_RS06480	COG0581	inorganic phosphate transmembrane transporter activity
CPZ98_RS06485	COG0573	inorganic phosphate transmembrane transporter activity
CPZ98_RS06490	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
CPZ98_RS06530	COG3385	transposase activity
CPZ98_RS06585	COG3312	ion transport
CPZ98_RS06600	COG0716	FMN binding
CPZ98_RS06605	COG1522	sequence-specific DNA binding
CPZ98_RS06625	COG3385	transposase activity
CPZ98_RS06640	COG1129	ABC transporter
CPZ98_RS06655	COG1172	Belongs to the binding-protein-dependent transport system permease family
CPZ98_RS06665	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPZ98_RS06670	COG1609	Transcriptional regulator
CPZ98_RS06675	COG0477	Major facilitator Superfamily
CPZ98_RS06680	COG2186	Transcriptional regulator
CPZ98_RS06720	COG3085	chromosome segregation
CPZ98_RS06725	COG0606	chelatase, subunit chli
CPZ98_RS06745	COG3978	acetolactate synthase activity
CPZ98_RS06750	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CPZ98_RS06760	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
CPZ98_RS06765	COG0583	DNA-binding transcription factor activity
CPZ98_RS06775	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CPZ98_RS06780	COG0210	DNA helicase
CPZ98_RS06795	COG3118	belongs to the thioredoxin family
CPZ98_RS06805	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
CPZ98_RS06815	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
CPZ98_RS06820	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
CPZ98_RS06825	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
CPZ98_RS06830	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
CPZ98_RS06835	COG1088	dTDP-glucose 4,6-dehydratase activity
CPZ98_RS06840	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
CPZ98_RS06845	COG0456	acetyltransferase
CPZ98_RS06850	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
CPZ98_RS06855	COG2244	polysaccharide biosynthetic process
CPZ98_RS06875	COG1113	amino acid transport
CPZ98_RS06900	COG0641	radical SAM
CPZ98_RS06910	COG3071	HemY protein
CPZ98_RS06915	COG2959	enzyme of heme biosynthesis
CPZ98_RS06920	COG1587	Uroporphyrinogen-III synthase
CPZ98_RS06930	COG3072	Adenylate cyclase
CPZ98_RS06970	COG5567	small periplasmic lipoprotein
CPZ98_RS06980	COG3159	Protein conserved in bacteria
CPZ98_RS06990	COG1011	Hydrolase
CPZ98_RS06995	COG0210	DNA helicase
CPZ98_RS07000	COG3698	Phosphodiester glycosidase
CPZ98_RS07005	COG3385	transposase activity
CPZ98_RS07010	COG3698	Phosphodiester glycosidase
CPZ98_RS07015	COG0598	Magnesium transport protein CorA
CPZ98_RS07030	COG2962	Rard protein
CPZ98_RS07035	COG2050	protein possibly involved in aromatic compounds catabolism
CPZ98_RS07040	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
CPZ98_RS07045	COG0514	ATP-dependent DNA helicase (RecQ)
CPZ98_RS07050	COG1280	lysine exporter protein (LysE YggA)
CPZ98_RS07055	COG1280	lysine exporter protein (LysE YggA)
CPZ98_RS07060	COG2267	carboxylic ester hydrolase activity
CPZ98_RS07065	COG0561	phosphatase activity
CPZ98_RS07070	COG0697	spore germination
CPZ98_RS07075	COG0583	DNA-binding transcription factor activity
CPZ98_RS07085	COG0412	Dienelactone hydrolase
CPZ98_RS07090	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
CPZ98_RS07095	COG1322	Protein conserved in bacteria
CPZ98_RS07105	COG3165	ubiquinone biosynthetic process from chorismate
CPZ98_RS07115	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CPZ98_RS07120	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CPZ98_RS07125	COG0805	protein transport
CPZ98_RS07135	COG0250	Participates in transcription elongation, termination and antitermination
CPZ98_RS07145	COG0543	2 iron, 2 sulfur cluster binding
CPZ98_RS07165	COG1739	Uncharacterized protein family UPF0029
CPZ98_RS07170	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
CPZ98_RS07175	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
CPZ98_RS07205	COG1763	Mo-molybdopterin cofactor biosynthetic process
CPZ98_RS07210	COG0746	molybdenum cofactor guanylyltransferase activity
CPZ98_RS07215	COG3084	Protein conserved in bacteria
CPZ98_RS07230	COG5339	Protein conserved in bacteria
CPZ98_RS07235	COG0204	Acyl-transferase
CPZ98_RS07245	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CPZ98_RS07245	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
CPZ98_RS07260	COG0635	Involved in the biosynthesis of porphyrin-containing compound
CPZ98_RS07270	COG2204	response regulator
CPZ98_RS07275	COG3852	Histidine kinase
CPZ98_RS07285	COG0174	glutamine synthetase
CPZ98_RS07290	COG1217	gtp-binding protein TYPA
CPZ98_RS07295	COG2188	Transcriptional regulator
CPZ98_RS07300	COG1082	Xylose isomerase domain protein TIM barrel
CPZ98_RS07320	COG2211	Major facilitator Superfamily
CPZ98_RS07330	COG1501	Belongs to the glycosyl hydrolase 31 family
CPZ98_RS07340	COG2942	2-epimerase
CPZ98_RS07350	COG2084	Dehydrogenase
CPZ98_RS07355	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPZ98_RS07360	COG1349	DNA-binding transcription factor activity
CPZ98_RS07365	COG1011	Hydrolase
CPZ98_RS07380	COG0456	acetyltransferase
CPZ98_RS07405	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CPZ98_RS07410	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
CPZ98_RS07420	COG2864	formate dehydrogenase
CPZ98_RS07425	COG0437	4 iron, 4 sulfur cluster binding
CPZ98_RS07480	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CPZ98_RS07495	COG2258	MOSC domain
CPZ98_RS07500	COG2205	protein histidine kinase activity
CPZ98_RS07505	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS07510	COG3678	ATP-independent chaperone mediated protein folding
CPZ98_RS07525	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
CPZ98_RS07550	COG3691	Protein conserved in bacteria
CPZ98_RS07555	COG0589	response to stress
CPZ98_RS07565	COG1494	fructose-1,6-bisphosphatase
CPZ98_RS07590	COG1575	Belongs to the MenA family. Type 1 subfamily
CPZ98_RS07605	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CPZ98_RS07610	COG1609	Transcriptional regulator
CPZ98_RS07615	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
CPZ98_RS07625	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
CPZ98_RS07635	COG0626	cystathionine gamma-synthase activity
CPZ98_RS07640	COG0527	aspartate kinase activity
CPZ98_RS07640	COG0460	homoserine dehydrogenase
CPZ98_RS07645	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
CPZ98_RS07655	COG0697	spore germination
CPZ98_RS07660	COG3738	Protein conserved in bacteria
CPZ98_RS07680	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPZ98_RS07685	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPZ98_RS07690	COG1882	Formate acetyltransferase
CPZ98_RS07695	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CPZ98_RS07700	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPZ98_RS07705	COG2207	Transcriptional regulator
CPZ98_RS07710	COG2194	sulfuric ester hydrolase activity
CPZ98_RS07740	COG3385	transposase activity
CPZ98_RS07745	COG4948	Mandelate Racemase Muconate Lactonizing
CPZ98_RS07765	COG0583	DNA-binding transcription factor activity
CPZ98_RS07775	COG1309	transcriptional regulator
CPZ98_RS07790	COG4206	TonB-dependent receptor
CPZ98_RS07795	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
CPZ98_RS07825	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
CPZ98_RS07825	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
CPZ98_RS07860	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
CPZ98_RS07865	COG0250	Participates in transcription elongation, termination and antitermination
CPZ98_RS07900	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
CPZ98_RS07910	COG2104	thiamine diphosphate biosynthetic process
CPZ98_RS07915	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CPZ98_RS07950	COG3068	Protein conserved in bacteria
CPZ98_RS07965	COG3678	ATP-independent chaperone mediated protein folding
CPZ98_RS07970	COG4191	Histidine kinase
CPZ98_RS07975	COG2204	response regulator
CPZ98_RS07980	COG0151	Belongs to the GarS family
CPZ98_RS08010	COG0456	acetyltransferase
CPZ98_RS08045	COG1414	Transcriptional regulator
CPZ98_RS08050	COG0646	methionine synthase
CPZ98_RS08050	COG1410	methionine synthase
CPZ98_RS08055	COG1283	sodium-dependent phosphate transmembrane transporter activity
CPZ98_RS08115	COG3592	Divergent 4Fe-4S mono-cluster
CPZ98_RS08130	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CPZ98_RS08135	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CPZ98_RS08135	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CPZ98_RS08140	COG3647	Membrane
CPZ98_RS08145	COG2211	Major facilitator Superfamily
CPZ98_RS08150	COG1486	melibiose metabolic process
CPZ98_RS08155	COG2169	Transcriptional regulator
CPZ98_RS08160	COG1982	Orn Lys Arg decarboxylase major
CPZ98_RS08165	COG2207	Transcriptional regulator
CPZ98_RS08170	COG0531	amino acid
CPZ98_RS08175	COG2194	sulfuric ester hydrolase activity
CPZ98_RS08180	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS08185	COG0642	Histidine kinase
CPZ98_RS08195	COG0477	Major facilitator Superfamily
CPZ98_RS08205	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
CPZ98_RS08210	COG2824	Alkylphosphonate utilization operon protein PhnA
CPZ98_RS08215	COG2764	glyoxalase bleomycin resistance protein dioxygenase
CPZ98_RS08225	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
CPZ98_RS08230	COG3639	organic phosphonate transmembrane transporter activity
CPZ98_RS08250	COG2207	Transcriptional regulator
CPZ98_RS08255	COG0789	Transcriptional regulator
CPZ98_RS08260	COG2252	PERMEase
CPZ98_RS08265	COG0025	NhaP-type Na H and K H
CPZ98_RS08270	COG1357	PFAM Pentapeptide repeats (8 copies)
CPZ98_RS08280	COG3162	membrane
CPZ98_RS08285	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
CPZ98_RS08295	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
CPZ98_RS08300	COG0437	4 iron, 4 sulfur cluster binding
CPZ98_RS08305	COG3301	Polysulphide reductase, NrfD
CPZ98_RS08310	COG1138	Cytochrome C-type biogenesis protein
CPZ98_RS08315	COG3088	subunit of a heme lyase
CPZ98_RS08320	COG4235	cytochrome complex assembly
CPZ98_RS08325	COG1301	dicarboxylic acid transport
CPZ98_RS08330	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
CPZ98_RS08360	COG0629	single-stranded DNA binding
CPZ98_RS08365	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
CPZ98_RS08370	COG2315	Protein conserved in bacteria
CPZ98_RS08375	COG0432	Pfam Uncharacterised protein family UPF0047
CPZ98_RS08380	COG3700	Belongs to the class B bacterial acid phosphatase family
CPZ98_RS08390	COG1448	Aminotransferase
CPZ98_RS08395	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CPZ98_RS08400	COG0305	Participates in initiation and elongation during chromosome replication
CPZ98_RS08405	COG0604	alcohol dehydrogenase
CPZ98_RS08415	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
CPZ98_RS08430	COG0735	belongs to the Fur family
CPZ98_RS08435	COG3237	CsbD-like
CPZ98_RS08440	COG0534	Mate efflux family protein
CPZ98_RS08450	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
CPZ98_RS08490	COG2182	Extracellular solute-binding protein
CPZ98_RS08495	COG1175	transmembrane transport
CPZ98_RS08500	COG3833	ABC-type maltose transport systems, permease component
CPZ98_RS08510	COG0477	Major facilitator Superfamily
CPZ98_RS08510	COG2814	Major facilitator Superfamily
CPZ98_RS08525	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CPZ98_RS08555	COG0527	aspartate kinase activity
CPZ98_RS08560	COG4372	Transposase
CPZ98_RS08565	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS08585	COG3366	ferrous iron transmembrane transporter activity
CPZ98_RS08590	COG0700	Nucleoside recognition
CPZ98_RS08595	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CPZ98_RS08600	COG0583	DNA-binding transcription factor activity
CPZ98_RS08625	COG2186	Transcriptional regulator
CPZ98_RS08630	COG0246	Mannitol dehydrogenase
CPZ98_RS08640	COG2610	gluconate transmembrane transporter activity
CPZ98_RS08645	COG3539	Fimbrial protein
CPZ98_RS08650	COG3539	Fimbrial protein
CPZ98_RS08655	COG3539	Fimbrial protein
CPZ98_RS08660	COG3188	usher protein
CPZ98_RS08670	COG3539	Fimbrial protein
CPZ98_RS08680	COG4974	Belongs to the 'phage' integrase family
CPZ98_RS08690	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
CPZ98_RS08720	COG0582	viral genome integration into host DNA
CPZ98_RS08730	COG1064	alcohol dehydrogenase
CPZ98_RS08735	COG0433	COG0433 Predicted ATPase
CPZ98_RS08740	COG0795	lipopolysaccharide-transporting ATPase activity
CPZ98_RS08745	COG0795	lipopolysaccharide-transporting ATPase activity
CPZ98_RS08755	COG2927	DNA polymerase III (CHI subunit)
CPZ98_RS08765	COG4269	membrane
CPZ98_RS08770	COG0456	acetyltransferase
CPZ98_RS08775	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
CPZ98_RS08790	COG2731	YhcH YjgK YiaL family protein
CPZ98_RS08795	COG1309	transcriptional regulator
CPZ98_RS08800	COG1028	Short-chain dehydrogenase reductase Sdr
CPZ98_RS08805	COG0251	oxidation-reduction process
CPZ98_RS08825	COG0251	oxidation-reduction process
CPZ98_RS08830	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
CPZ98_RS08840	COG1609	Transcriptional regulator
CPZ98_RS08845	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPZ98_RS08845	COG1263	PTS System
CPZ98_RS08850	COG0366	Alpha amylase catalytic
CPZ98_RS08855	COG1328	CTP reductase activity
CPZ98_RS08860	COG0602	queuosine metabolic process
CPZ98_RS08865	COG3783	Cytochrome b(562)
CPZ98_RS08870	COG0312	modulator of DNA gyrase
CPZ98_RS08880	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
CPZ98_RS08890	COG3385	transposase activity
CPZ98_RS08900	COG1172	Belongs to the binding-protein-dependent transport system permease family
CPZ98_RS08905	COG1129	ABC transporter
CPZ98_RS08915	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
CPZ98_RS08920	COG2105	PFAM AIG2 family protein
CPZ98_RS08925	COG2911	Protein conserved in bacteria
CPZ98_RS08930	COG0729	surface antigen
CPZ98_RS08940	COG1253	flavin adenine dinucleotide binding
CPZ98_RS08950	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
CPZ98_RS08965	COG0737	Belongs to the 5'-nucleotidase family
CPZ98_RS08970	COG1733	regulation of RNA biosynthetic process
CPZ98_RS08975	COG0702	epimerase
CPZ98_RS08980	COG0697	spore germination
CPZ98_RS08990	COG1113	amino acid transport
CPZ98_RS08995	COG0545	Peptidyl-prolyl cis-trans isomerase
CPZ98_RS09005	COG3061	Opacity-associated protein A
CPZ98_RS09010	COG1309	transcriptional regulator
CPZ98_RS09050	COG1309	transcriptional regulator
CPZ98_RS09065	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
CPZ98_RS09070	COG1027	Aspartate ammonia-lyase
CPZ98_RS09075	COG3030	protein affecting phage T7 exclusion by the F plasmid
CPZ98_RS09080	COG0531	amino acid
CPZ98_RS09115	COG1509	lysine 2,3-aminomutase activity
CPZ98_RS09125	COG5510	response to toxic substance
CPZ98_RS09130	COG5510	response to toxic substance
CPZ98_RS09135	COG2076	Multidrug Resistance protein
CPZ98_RS09140	COG3040	lipid binding
CPZ98_RS09145	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CPZ98_RS09160	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CPZ98_RS09165	COG1053	succinate dehydrogenase
CPZ98_RS09175	COG0531	amino acid
CPZ98_RS09190	COG3264	Mechanosensitive ion channel
CPZ98_RS09190	COG1511	domain protein
CPZ98_RS09235	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CPZ98_RS09240	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
CPZ98_RS09240	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
CPZ98_RS09245	COG0802	atpase or kinase
CPZ98_RS09250	COG0860	N-Acetylmuramoyl-L-alanine amidase
CPZ98_RS09270	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
CPZ98_RS09275	COG0330	HflC and HflK could
CPZ98_RS09280	COG0330	HflC and HflK could
CPZ98_RS09285	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
CPZ98_RS09300	COG0557	exoribonuclease II activity
CPZ98_RS09305	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
CPZ98_RS09315	COG3766	membrane
CPZ98_RS09320	COG5463	Belongs to the UPF0441 family
CPZ98_RS09325	COG0754	glutathionylspermidine amidase activity
CPZ98_RS09330	COG1960	acyl-CoA dehydrogenase activity
CPZ98_RS09340	COG3650	response to hydrogen peroxide
CPZ98_RS09345	COG1073	alpha beta
CPZ98_RS09405	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
CPZ98_RS09445	COG0732	type I restriction modification DNA specificity domain
CPZ98_RS09475	COG0523	cobalamin synthesis protein
CPZ98_RS09480	COG2879	small protein
CPZ98_RS09485	COG1966	Carbon starvation protein
CPZ98_RS09490	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
CPZ98_RS09520	COG3971	2-oxopent-4-enoate hydratase activity
CPZ98_RS09530	COG3384	dioxygenase
CPZ98_RS09535	COG1012	belongs to the aldehyde dehydrogenase family
CPZ98_RS09540	COG0179	Fumarylacetoacetate (FAA) hydrolase
CPZ98_RS09545	COG1846	Transcriptional regulator
CPZ98_RS09550	COG0840	transmembrane signaling receptor activity
CPZ98_RS09555	COG2271	Major facilitator Superfamily
CPZ98_RS09560	COG1802	Transcriptional regulator
CPZ98_RS09580	COG1484	DNA-dependent DNA replication
CPZ98_RS09595	COG2966	Psort location CytoplasmicMembrane, score
CPZ98_RS09605	COG2197	response regulator
CPZ98_RS09610	COG2197	response regulator
CPZ98_RS09615	COG4114	ferric iron reductase
CPZ98_RS09645	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
CPZ98_RS09650	COG0456	acetyltransferase
CPZ98_RS09655	COG1011	Hydrolase
CPZ98_RS09665	COG2823	Periplasmic or secreted lipoprotein
CPZ98_RS09675	COG4667	esterase of the alpha-beta hydrolase superfamily
CPZ98_RS09680	COG0084	hydrolase, TatD family'
CPZ98_RS09685	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CPZ98_RS09690	COG1328	CTP reductase activity
CPZ98_RS09725	COG3726	membrane protein affecting hemolysin expression
CPZ98_RS09730	COG0560	Phosphoserine phosphatase
CPZ98_RS09735	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
CPZ98_RS09740	COG1056	cytidyltransferase-related domain
CPZ98_RS09740	COG3172	ATPase kinase involved in NAD metabolism
CPZ98_RS09745	COG0488	(ABC) transporter
CPZ98_RS09750	COG0741	lytic transglycosylase activity
CPZ98_RS09770	COG3708	Transcriptional regulator
CPZ98_RS09770	COG2207	Transcriptional regulator
CPZ98_RS09775	COG3045	CreA protein
CPZ98_RS09780	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS09785	COG2205	protein histidine kinase activity
CPZ98_RS09790	COG4452	Inner membrane protein CreD
CPZ98_RS09795	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS09805	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
CPZ98_RS09815	COG0527	aspartate kinase activity
CPZ98_RS09815	COG0460	homoserine dehydrogenase
CPZ98_RS09825	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
CPZ98_RS09845	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CPZ98_RS09850	COG0521	Mo-molybdopterin cofactor biosynthetic process
CPZ98_RS09855	COG3385	transposase activity
CPZ98_RS09860	COG1584	GPR1 FUN34 yaaH family protein
CPZ98_RS09865	COG4735	regulation of single-species biofilm formation
CPZ98_RS09900	COG0583	DNA-binding transcription factor activity
CPZ98_RS09925	COG0196	riboflavin kinase activity
CPZ98_RS09940	COG1047	Peptidyl-prolyl cis-trans
CPZ98_RS09960	COG0505	Belongs to the CarA family
CPZ98_RS09965	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
CPZ98_RS10025	COG2271	Major facilitator Superfamily
CPZ98_RS10040	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
CPZ98_RS10065	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CPZ98_RS10075	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
CPZ98_RS10080	COG0564	pseudouridine synthase activity
CPZ98_RS10090	COG0417	DNA replication proofreading
CPZ98_RS10095	COG0235	Class ii aldolase
CPZ98_RS10110	COG4977	sequence-specific DNA binding
CPZ98_RS10115	COG0586	Pfam SNARE associated Golgi protein
CPZ98_RS10125	COG1178	ABC-type Fe3 transport system permease component
CPZ98_RS10130	COG4143	(ABC) transporter
CPZ98_RS10145	COG2814	Major facilitator Superfamily
CPZ98_RS10175	COG0583	DNA-binding transcription factor activity
CPZ98_RS10180	COG0028	Belongs to the TPP enzyme family
CPZ98_RS10185	COG0440	acetolactate synthase activity
CPZ98_RS10195	COG1609	Transcriptional regulator
CPZ98_RS10215	COG3116	cell division
CPZ98_RS10220	COG0768	penicillin binding
CPZ98_RS10230	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
CPZ98_RS10245	COG0772	Belongs to the SEDS family
CPZ98_RS10265	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
CPZ98_RS10270	COG0849	cell division
CPZ98_RS10275	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
CPZ98_RS10295	COG0494	nUDIX hydrolase
CPZ98_RS10320	COG1459	type II secretion system
CPZ98_RS10330	COG4969	Belongs to the N-Me-Phe pilin family
CPZ98_RS10335	COG0157	Belongs to the NadC ModD family
CPZ98_RS10340	COG3023	N-Acetylmuramoyl-L-alanine amidase
CPZ98_RS10345	COG3725	Membrane protein required for beta-lactamase induction
CPZ98_RS10355	COG2186	Transcriptional regulator
CPZ98_RS10360	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
CPZ98_RS10365	COG0508	dehydrogenase complex catalyzes the overall conversion of
CPZ98_RS10370	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
CPZ98_RS10380	COG1049	propionate catabolic process, 2-methylcitrate cycle
CPZ98_RS10405	COG2132	Multicopper oxidase
CPZ98_RS10410	COG4993	Dehydrogenase
CPZ98_RS10415	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
CPZ98_RS10420	COG0288	reversible hydration of carbon dioxide
CPZ98_RS10425	COG1131	(ABC) transporter
CPZ98_RS10430	COG0842	Transport permease protein
CPZ98_RS10435	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPZ98_RS10440	COG0726	polysaccharide deacetylase
CPZ98_RS10450	COG5464	transposase or invertase
CPZ98_RS10475	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
CPZ98_RS10480	COG0617	tRNA 3'-terminal CCA addition
CPZ98_RS10490	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CPZ98_RS10500	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
CPZ98_RS10505	COG1643	Atp-dependent helicase
CPZ98_RS10510	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
CPZ98_RS10515	COG4774	siderophore transport
CPZ98_RS10520	COG1120	ATPase activity
CPZ98_RS10525	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CPZ98_RS10530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPZ98_RS10555	COG2860	membrane
CPZ98_RS10575	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
CPZ98_RS10600	COG0024	Methionine aminopeptidase
CPZ98_RS10630	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
CPZ98_RS10635	COG0575	Belongs to the CDS family
CPZ98_RS10640	COG0750	zinc metalloprotease
CPZ98_RS10650	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
CPZ98_RS10655	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
CPZ98_RS10680	COG0587	DNA-directed DNA polymerase activity
CPZ98_RS10690	COG1982	Orn Lys Arg decarboxylase major
CPZ98_RS10695	COG0346	lactoylglutathione lyase activity
CPZ98_RS10705	COG4568	rho-dependent transcription termination
CPZ98_RS10715	COG4681	YaeQ
CPZ98_RS10720	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
CPZ98_RS10725	COG3015	lipoprotein NlpE involved in copper resistance
CPZ98_RS10730	COG0791	NLP P60 protein
CPZ98_RS10740	COG1720	tRNA m6t6A37 methyltransferase activity
CPZ98_RS10750	COG1464	Belongs to the NlpA lipoprotein family
CPZ98_RS10755	COG2011	ABC-type metal ion transport system permease component
CPZ98_RS10760	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
CPZ98_RS10765	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
CPZ98_RS10800	COG0656	L-ascorbic acid biosynthetic process
CPZ98_RS10820	COG0583	DNA-binding transcription factor activity
CPZ98_RS10830	COG2226	methyltransferase
CPZ98_RS10835	COG0741	lytic transglycosylase activity
CPZ98_RS10835	COG1388	LysM domain
CPZ98_RS10845	COG2226	methyltransferase
CPZ98_RS10855	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CPZ98_RS10940	COG2246	polysaccharide biosynthetic process
CPZ98_RS10980	COG0582	viral genome integration into host DNA
CPZ98_RS11005	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
CPZ98_RS11025	COG2195	Cleaves the N-terminal amino acid of tripeptides
CPZ98_RS11035	COG1690	Belongs to the RtcB family
CPZ98_RS11040	COG0454	-acetyltransferase
CPZ98_RS11050	COG2161	toxin-antitoxin pair type II binding
CPZ98_RS11070	COG0791	NLP P60 protein
CPZ98_RS11075	COG3034	peptidoglycan biosynthetic process
CPZ98_RS11080	COG0121	glutamine amidotransferase
CPZ98_RS11100	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CPZ98_RS11115	COG4521	taurine ABC transporter
CPZ98_RS11125	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CPZ98_RS11130	COG2175	clavaminate synthase activity
CPZ98_RS11135	COG0113	porphobilinogen synthase activity
CPZ98_RS11180	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CPZ98_RS11185	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
CPZ98_RS11190	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
CPZ98_RS11210	COG1181	Belongs to the D-alanine--D-alanine ligase family
CPZ98_RS11220	COG1785	Belongs to the alkaline phosphatase family
CPZ98_RS11235	COG3706	GGDEF domain
CPZ98_RS11240	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
CPZ98_RS11260	COG4126	flavin adenine dinucleotide binding
CPZ98_RS11285	COG1940	carbohydrate kinase activity
CPZ98_RS11290	COG2814	Major facilitator Superfamily
CPZ98_RS11295	COG0419	ATPase involved in DNA repair
CPZ98_RS11300	COG0420	3'-5' exonuclease activity
CPZ98_RS11310	COG5002	protein histidine kinase activity
CPZ98_RS11315	COG1114	Component of the transport system for branched-chain amino acids
CPZ98_RS11320	COG1113	amino acid transport
CPZ98_RS11325	COG0366	Alpha amylase catalytic
CPZ98_RS11345	COG1862	Preprotein translocase
CPZ98_RS11350	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CPZ98_RS11355	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
CPZ98_RS11360	COG1403	HNH endonuclease
CPZ98_RS11365	COG3248	Nucleoside-binding outer membrane protein
CPZ98_RS11370	COG4238	major outer membrane lipoprotein
CPZ98_RS11380	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CPZ98_RS11380	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
CPZ98_RS11395	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
CPZ98_RS11400	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
CPZ98_RS11405	COG0667	Aldo Keto reductase
CPZ98_RS11415	COG0142	geranyltranstransferase activity
CPZ98_RS11430	COG0693	protein deglycase activity
CPZ98_RS11435	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
CPZ98_RS11480	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
CPZ98_RS11485	COG1845	cytochrome c oxidase, subunit III
CPZ98_RS11510	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS11525	COG2223	nitrite transmembrane transporter activity
CPZ98_RS11530	COG3056	Lipoprotein
CPZ98_RS11535	COG0271	Belongs to the BolA IbaG family
CPZ98_RS11555	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
CPZ98_RS11560	COG0776	regulation of translation
CPZ98_RS11565	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
CPZ98_RS11570	COG1555	photosystem II stabilization
CPZ98_RS11575	COG0824	Thioesterase
CPZ98_RS11585	COG4533	DNA binding
CPZ98_RS11595	COG1522	sequence-specific DNA binding
CPZ98_RS11600	COG1132	(ABC) transporter
CPZ98_RS11605	COG1132	(ABC) transporter
CPZ98_RS11610	COG0347	Belongs to the P(II) protein family
CPZ98_RS11615	COG0004	ammonium transporteR
CPZ98_RS11620	COG1946	Acyl-CoA thioesterase
CPZ98_RS11625	COG3126	Type III secretion system lipoprotein chaperone (YscW)
CPZ98_RS11630	COG3385	transposase activity
CPZ98_RS11635	COG3695	enzyme binding
CPZ98_RS11645	COG5507	3-demethylubiquinone-9 3-methyltransferase
CPZ98_RS11650	COG4943	cyclic-guanylate-specific phosphodiesterase activity
CPZ98_RS11660	COG0110	maltose O-acetyltransferase activity
CPZ98_RS11675	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CPZ98_RS11680	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CPZ98_RS11685	COG1309	transcriptional regulator
CPZ98_RS11690	COG3264	Mechanosensitive ion channel
CPZ98_RS11690	COG1196	nuclear chromosome segregation
CPZ98_RS11700	COG3923	Primosomal replication protein n
CPZ98_RS11705	COG2832	Protein of unknown function (DUF454)
CPZ98_RS11715	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
CPZ98_RS11750	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPZ98_RS11755	COG4651	solute:proton antiporter activity
CPZ98_RS11755	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CPZ98_RS11760	COG2223	nitrite transmembrane transporter activity
CPZ98_RS11765	COG0737	Belongs to the 5'-nucleotidase family
CPZ98_RS11770	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
CPZ98_RS11775	COG3735	TraB family
CPZ98_RS11785	COG3093	addiction module antidote protein HigA
CPZ98_RS11790	COG2217	Heavy metal translocating P-type atpase
CPZ98_RS11800	COG0531	amino acid
CPZ98_RS11805	COG0789	Transcriptional regulator
CPZ98_RS11810	COG1585	Membrane protein implicated in regulation of membrane protease activity
CPZ98_RS11815	COG0330	HflC and HflK could
CPZ98_RS11820	COG4619	ABC transporter
CPZ98_RS11825	COG0390	transport system, permease component
CPZ98_RS11830	COG3118	belongs to the thioredoxin family
CPZ98_RS11835	COG0300	oxidoreductase activity
CPZ98_RS11845	COG4181	ATPase activity
CPZ98_RS11850	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CPZ98_RS11855	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
CPZ98_RS11865	COG0583	DNA-binding transcription factor activity
CPZ98_RS11875	COG1414	Transcriptional regulator
CPZ98_RS11880	COG3960	tartronate-semialdehyde synthase activity
CPZ98_RS11895	COG3257	ureidoglycine aminohydrolase activity
CPZ98_RS11900	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
CPZ98_RS11910	COG0549	Belongs to the carbamate kinase family
CPZ98_RS11915	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
CPZ98_RS11920	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
CPZ98_RS11930	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
CPZ98_RS11940	COG1988	membrane-bound metal-dependent
CPZ98_RS11945	COG2501	S4 domain
CPZ98_RS11955	COG3539	Fimbrial protein
CPZ98_RS11960	COG3121	Chaperone
CPZ98_RS11985	COG2207	Transcriptional regulator
CPZ98_RS11995	COG4783	chaperone-mediated protein folding
CPZ98_RS12010	COG5002	protein histidine kinase activity
CPZ98_RS12015	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS12025	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CPZ98_RS12065	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
CPZ98_RS12070	COG1113	amino acid transport
CPZ98_RS12075	COG0668	transmembrane transport
CPZ98_RS12080	COG0778	Nitroreductase
CPZ98_RS12085	COG2315	Protein conserved in bacteria
CPZ98_RS12100	COG1475	DNA binding
CPZ98_RS12120	COG0583	DNA-binding transcription factor activity
CPZ98_RS12125	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
CPZ98_RS12130	COG0450	alkyl hydroperoxide reductase
CPZ98_RS12135	COG3634	alkyl hydroperoxide reductase activity
CPZ98_RS12145	COG1063	alcohol dehydrogenase
CPZ98_RS12155	COG1063	alcohol dehydrogenase
CPZ98_RS12160	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
CPZ98_RS12165	COG3719	Belongs to the RNase T2 family
CPZ98_RS12185	COG3051	citrate lyase alpha subunit
CPZ98_RS12190	COG2301	Belongs to the HpcH HpaI aldolase family
CPZ98_RS12200	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
CPZ98_RS12210	COG0582	viral genome integration into host DNA
CPZ98_RS12215	COG0561	phosphatase activity
CPZ98_RS12225	COG4149	molybdate abc transporter
CPZ98_RS12230	COG0725	ABC transporter, periplasmic molybdate-binding protein
CPZ98_RS12240	COG2005	Transcriptional regulator
CPZ98_RS12240	COG3585	molybdate ion transport
CPZ98_RS12245	COG1119	ATPase activity
CPZ98_RS12250	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
CPZ98_RS12255	COG1085	galactose-1-phosphate uridylyltransferase
CPZ98_RS12265	COG2017	converts alpha-aldose to the beta-anomer
CPZ98_RS12275	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
CPZ98_RS12290	COG3201	nicotinamide mononucleotide transporter
CPZ98_RS12325	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
CPZ98_RS12330	COG2885	chlorophyll binding
CPZ98_RS12340	COG3064	Membrane
CPZ98_RS12345	COG0848	biopolymer transport protein
CPZ98_RS12350	COG0811	peptide transport
CPZ98_RS12355	COG0824	Thioesterase
CPZ98_RS12360	COG3790	cyd operon protein YbgE
CPZ98_RS12365	COG4890	Cyd operon protein YbgT
CPZ98_RS12370	COG1294	oxidase, subunit
CPZ98_RS12375	COG1271	oxidase subunit
CPZ98_RS12390	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPZ98_RS12390	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPZ98_RS12390	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPZ98_RS12395	COG2188	Transcriptional regulator
CPZ98_RS12400	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
CPZ98_RS12410	COG0508	dehydrogenase complex catalyzes the overall conversion of
CPZ98_RS12415	COG0567	Dehydrogenase, E1 component
CPZ98_RS12420	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
CPZ98_RS12425	COG1053	succinate dehydrogenase
CPZ98_RS12430	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
CPZ98_RS12435	COG2009	succinate dehydrogenase
CPZ98_RS12445	COG0372	Belongs to the citrate synthase family
CPZ98_RS12450	COG3539	Fimbrial protein
CPZ98_RS12455	COG3188	usher protein
CPZ98_RS12460	COG3121	Chaperone
CPZ98_RS12470	COG3180	Ammonia monooxygenase
CPZ98_RS12490	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
CPZ98_RS12495	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
CPZ98_RS12505	COG0415	Belongs to the DNA photolyase family
CPZ98_RS12510	COG3272	Protein of unknown function (DUF1722)
CPZ98_RS12570	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS12590	COG0531	amino acid
CPZ98_RS12595	COG0033	Phosphoglucomutase
CPZ98_RS12600	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
CPZ98_RS12605	COG0596	Alpha beta hydrolase
CPZ98_RS12615	COG0716	FMN binding
CPZ98_RS12625	COG0735	belongs to the Fur family
CPZ98_RS12645	COG2190	(PTS) system
CPZ98_RS12645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPZ98_RS12645	COG1263	PTS System
CPZ98_RS12655	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
CPZ98_RS12660	COG1846	Transcriptional regulator
CPZ98_RS12660	COG1940	carbohydrate kinase activity
CPZ98_RS12665	COG0647	UMP catabolic process
CPZ98_RS12670	COG0367	asparagine synthase
CPZ98_RS12715	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
CPZ98_RS12725	COG1702	phosphate starvation-inducible protein PhoH
CPZ98_RS12735	COG4535	Mg2 and Co2 transporter CorC
CPZ98_RS12745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPZ98_RS12750	COG0765	amino acid transport
CPZ98_RS12755	COG0765	amino acid transport
CPZ98_RS12760	COG1126	abc transporter atp-binding protein
CPZ98_RS12775	COG2214	Heat shock protein DnaJ domain protein
CPZ98_RS12785	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
CPZ98_RS12790	COG2214	Heat shock protein DnaJ domain protein
CPZ98_RS12800	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
CPZ98_RS12805	COG2888	peptidyl-tyrosine sulfation
CPZ98_RS12820	COG1466	dna polymerase III delta subunit
CPZ98_RS12830	COG0406	alpha-ribazole phosphatase activity
CPZ98_RS12835	COG0799	negative regulation of ribosome biogenesis
CPZ98_RS12845	COG0768	penicillin binding
CPZ98_RS12850	COG0772	Belongs to the SEDS family
CPZ98_RS12855	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
CPZ98_RS12860	COG1686	Belongs to the peptidase S11 family
CPZ98_RS12875	COG0583	DNA-binding transcription factor activity
CPZ98_RS12885	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
CPZ98_RS12890	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
CPZ98_RS12910	COG3069	C4-dicarboxylate transmembrane transporter activity
CPZ98_RS12925	COG3423	Transcriptional regulator
CPZ98_RS12980	COG3646	Phage regulatory protein
CPZ98_RS13035	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
CPZ98_RS13050	COG2828	Protein conserved in bacteria
CPZ98_RS13055	COG0471	metal ion transport
CPZ98_RS13060	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CPZ98_RS13065	COG4677	pectinesterase activity
CPZ98_RS13070	COG0582	viral genome integration into host DNA
CPZ98_RS13085	COG3772	lysozyme
CPZ98_RS13115	COG1783	phage Terminase large subunit
CPZ98_RS13140	COG1396	sequence-specific DNA binding
CPZ98_RS13175	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
CPZ98_RS13260	COG1484	DNA-dependent DNA replication
CPZ98_RS13265	COG0305	Participates in initiation and elongation during chromosome replication
CPZ98_RS13315	COG3772	lysozyme
CPZ98_RS13450	COG5301	cellulose 1,4-beta-cellobiosidase activity
CPZ98_RS13480	COG1881	PFAM PEBP family protein
CPZ98_RS13485	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
CPZ98_RS13500	COG2226	methyltransferase
CPZ98_RS13505	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CPZ98_RS13515	COG0391	Required for morphogenesis under gluconeogenic growth conditions
CPZ98_RS13525	COG0521	Mo-molybdopterin cofactor biosynthetic process
CPZ98_RS13535	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
CPZ98_RS13540	COG0314	molybdopterin synthase activity
CPZ98_RS13545	COG0670	Belongs to the BI1 family
CPZ98_RS13550	COG0670	Belongs to the BI1 family
CPZ98_RS13555	COG0392	lysyltransferase activity
CPZ98_RS13565	COG3568	Endonuclease Exonuclease Phosphatase
CPZ98_RS13575	COG0842	Transport permease protein
CPZ98_RS13580	COG0842	Transport permease protein
CPZ98_RS13585	COG1131	(ABC) transporter
CPZ98_RS13595	COG1309	transcriptional regulator
CPZ98_RS13615	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CPZ98_RS13620	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
CPZ98_RS13630	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
CPZ98_RS13645	COG3385	transposase activity
CPZ98_RS13670	COG1126	abc transporter atp-binding protein
CPZ98_RS13675	COG0765	amino acid transport
CPZ98_RS13680	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPZ98_RS13695	COG5006	permease, DMT superfamily
CPZ98_RS13705	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
CPZ98_RS13710	COG2194	sulfuric ester hydrolase activity
CPZ98_RS13720	COG1321	iron dependent repressor
CPZ98_RS13725	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
CPZ98_RS13730	COG1376	ErfK ybiS ycfS ynhG family protein
CPZ98_RS13735	COG0488	(ABC) transporter
CPZ98_RS13745	COG0561	phosphatase activity
CPZ98_RS13750	COG1882	Formate acetyltransferase
CPZ98_RS13755	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CPZ98_RS13760	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
CPZ98_RS13765	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
CPZ98_RS13770	COG0303	'Molybdopterin
CPZ98_RS13775	COG1446	asparaginase
CPZ98_RS13800	COG2200	EAL domain
CPZ98_RS13805	COG2199	diguanylate cyclase activity
CPZ98_RS13820	COG2133	pyrroloquinoline quinone binding
CPZ98_RS13825	COG2133	pyrroloquinoline quinone binding
CPZ98_RS13830	COG0625	glutathione transferase activity
CPZ98_RS13835	COG1686	Belongs to the peptidase S11 family
CPZ98_RS13850	COG1349	DNA-binding transcription factor activity
CPZ98_RS13855	COG0671	phosphoesterase, PA-phosphatase related
CPZ98_RS13860	COG2814	Major facilitator Superfamily
CPZ98_RS13870	COG0561	phosphatase activity
CPZ98_RS13875	COG0738	Major facilitator superfamily
CPZ98_RS13880	COG3226	Transcriptional regulator
CPZ98_RS13895	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
CPZ98_RS13920	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CPZ98_RS13925	COG3842	ATPase activity
CPZ98_RS13930	COG1176	ABC-type spermidine putrescine transport system, permease component I
CPZ98_RS13935	COG1177	transmembrane transport
CPZ98_RS13950	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPZ98_RS13955	COG4160	amino acid transport
CPZ98_RS13960	COG4215	(ABC) transporter
CPZ98_RS13965	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPZ98_RS13970	COG1126	abc transporter atp-binding protein
CPZ98_RS14000	COG3023	N-Acetylmuramoyl-L-alanine amidase
CPZ98_RS14005	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CPZ98_RS14010	COG0702	epimerase
CPZ98_RS14015	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
CPZ98_RS14020	COG0028	Belongs to the TPP enzyme family
CPZ98_RS14025	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CPZ98_RS14035	COG2431	L-lysine efflux transmembrane transporter activity
CPZ98_RS14055	COG3593	DNA synthesis involved in DNA repair
CPZ98_RS14060	COG2990	Protein conserved in bacteria
CPZ98_RS14065	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
CPZ98_RS14075	COG1278	Cold shock
CPZ98_RS14085	COG0542	response to heat
CPZ98_RS14110	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
CPZ98_RS14115	COG4988	ABC transporter
CPZ98_RS14120	COG0492	ferredoxin-NADP+ reductase activity
CPZ98_RS14125	COG1522	sequence-specific DNA binding
CPZ98_RS14140	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
CPZ98_RS14155	COG0437	4 iron, 4 sulfur cluster binding
CPZ98_RS14160	COG3302	dmso reductase anchor subunit
CPZ98_RS14165	COG1335	isochorismatase
CPZ98_RS14185	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS14220	COG0583	DNA-binding transcription factor activity
CPZ98_RS14235	COG2249	NAD(P)H dehydrogenase (quinone) activity
CPZ98_RS14245	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
CPZ98_RS14250	COG1882	Formate acetyltransferase
CPZ98_RS14255	COG2116	formate transmembrane transporter activity
CPZ98_RS14260	COG1944	ATP diphosphatase activity
CPZ98_RS14280	COG3385	transposase activity
CPZ98_RS14285	COG0501	Belongs to the peptidase M48B family
CPZ98_RS14295	COG0539	negative regulation of cytoplasmic translation
CPZ98_RS14320	COG3214	Protein conserved in bacteria
CPZ98_RS14335	COG3173	Aminoglycoside phosphotransferase
CPZ98_RS14345	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
CPZ98_RS14355	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
CPZ98_RS14365	COG3385	transposase activity
CPZ98_RS14370	COG2989	Protein conserved in bacteria
CPZ98_RS14375	COG3108	Peptidase M15
CPZ98_RS14380	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
CPZ98_RS14385	COG1448	Aminotransferase
CPZ98_RS14405	COG0308	aminopeptidase N
CPZ98_RS14425	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
CPZ98_RS14435	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
CPZ98_RS14440	COG0431	NADPH-dependent FMN reductase
CPZ98_RS14450	COG3188	usher protein
CPZ98_RS14455	COG3539	Fimbrial protein
CPZ98_RS14460	COG3539	Fimbrial protein
CPZ98_RS14465	COG3539	Fimbrial protein
CPZ98_RS14485	COG0633	Ferredoxin
CPZ98_RS14485	COG3217	Mosc domain protein beta barrel domain protein
CPZ98_RS14495	COG0488	(ABC) transporter
CPZ98_RS14500	COG2995	paraquat-inducible protein a
CPZ98_RS14505	COG3008	intermembrane lipid transfer
CPZ98_RS14505	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
CPZ98_RS14510	COG3009	Protein conserved in bacteria
CPZ98_RS14515	COG3130	regulation of translation
CPZ98_RS14525	COG1067	ATP-dependent peptidase activity
CPZ98_RS14545	COG3070	regulator of competence-specific genes
CPZ98_RS14555	COG1289	transmembrane transporter activity
CPZ98_RS14560	COG3304	Inner membrane component domain
CPZ98_RS14565	COG0210	DNA helicase
CPZ98_RS14580	COG1832	CoA-binding protein
CPZ98_RS14595	COG1254	Belongs to the acylphosphatase family
CPZ98_RS14600	COG2920	part of a sulfur-relay system
CPZ98_RS14605	COG0670	Belongs to the BI1 family
CPZ98_RS14615	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
CPZ98_RS14620	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
CPZ98_RS14625	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
CPZ98_RS14630	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
CPZ98_RS14635	COG1999	signal sequence binding
CPZ98_RS14640	COG1773	rubredoxin
CPZ98_RS14645	COG1271	oxidase subunit
CPZ98_RS14650	COG1294	oxidase, subunit
CPZ98_RS14665	COG3206	protein involved in exopolysaccharide biosynthesis
CPZ98_RS14665	COG0489	protein tyrosine kinase activity
CPZ98_RS14670	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CPZ98_RS14675	COG1596	polysaccharide export
CPZ98_RS14680	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CPZ98_RS14700	COG3728	DNA packaging
CPZ98_RS14700	COG5484	DNA packaging
CPZ98_RS14705	COG1783	phage Terminase large subunit
CPZ98_RS14850	COG1879	ABC-type sugar transport system periplasmic component
CPZ98_RS14855	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS14860	COG3005	denitrification pathway
CPZ98_RS14865	COG0243	molybdopterin cofactor binding
CPZ98_RS14915	COG3729	General stress protein
CPZ98_RS14920	COG2233	PERMEase
CPZ98_RS14960	COG1309	transcriptional regulator
CPZ98_RS14980	COG2822	iron ion transport
CPZ98_RS14990	COG1702	phosphate starvation-inducible protein PhoH
CPZ98_RS15030	COG0640	Transcriptional regulator
CPZ98_RS15070	COG0726	polysaccharide deacetylase
CPZ98_RS15085	COG3344	reverse transcriptase
CPZ98_RS15095	COG2085	NADP oxidoreductase coenzyme F420-dependent
CPZ98_RS15100	COG1120	ATPase activity
CPZ98_RS15105	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPZ98_RS15110	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPZ98_RS15115	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
CPZ98_RS15120	COG4772	TonB-dependent receptor
CPZ98_RS15125	COG3712	iron ion homeostasis
CPZ98_RS15130	COG1595	DNA-templated transcription, initiation
CPZ98_RS15165	COG4372	Transposase
CPZ98_RS15170	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS15305	COG2003	Belongs to the UPF0758 family
CPZ98_RS15365	COG3381	protein complex oligomerization
CPZ98_RS15390	COG2197	response regulator
CPZ98_RS15430	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
CPZ98_RS15445	COG2943	transferase activity, transferring hexosyl groups
CPZ98_RS15485	COG1560	Kdo2-lipid A biosynthetic process
CPZ98_RS15500	COG3038	cytochrome b561
CPZ98_RS15535	COG2999	glutathione oxidoreductase activity
CPZ98_RS15545	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CPZ98_RS15555	COG0673	inositol 2-dehydrogenase activity
CPZ98_RS15560	COG0728	peptidoglycan biosynthetic process
CPZ98_RS15565	COG3418	PFAM FlgN family protein
CPZ98_RS15570	COG2747	anti-sigma28 factor FlgM
CPZ98_RS15575	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
CPZ98_RS15580	COG1815	bacterial-type flagellum-dependent cell motility
CPZ98_RS15595	COG1749	Flagellar hook protein flgE
CPZ98_RS15605	COG4786	Flagellar basal body rod
CPZ98_RS15620	COG1705	Flagellar rod assembly protein muramidase FlgJ
CPZ98_RS15620	COG3951	Flagellar rod assembly protein muramidase FlgJ
CPZ98_RS15630	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
CPZ98_RS15635	COG1530	ribonuclease E activity
CPZ98_RS15645	COG0564	pseudouridine synthase activity
CPZ98_RS15650	COG0424	maF-like protein
CPZ98_RS15655	COG1399	metal-binding, possibly nucleic acid-binding protein
CPZ98_RS15675	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
CPZ98_RS15680	COG1028	Short-chain dehydrogenase reductase Sdr
CPZ98_RS15690	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CPZ98_RS15695	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
CPZ98_RS15700	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
CPZ98_RS15710	COG0470	DNA polymerase III
CPZ98_RS15715	COG0084	hydrolase, TatD family'
CPZ98_RS15720	COG1263	PTS System
CPZ98_RS15720	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPZ98_RS15730	COG0537	adenosine 5'-monophosphoramidase activity
CPZ98_RS15735	COG5633	Lipoprotein
CPZ98_RS15740	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
CPZ98_RS15760	COG1252	NADH dehydrogenase
CPZ98_RS15765	COG3134	Outer membrane lipoprotein
CPZ98_RS15770	COG1309	transcriptional regulator
CPZ98_RS15780	COG1388	LysM domain
CPZ98_RS15780	COG1376	ErfK ybiS ycfS ynhG family protein
CPZ98_RS15785	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
CPZ98_RS15790	COG4763	Acyl-transferase
CPZ98_RS15795	COG4591	ABC-type transport system involved in lipoprotein release permease component
CPZ98_RS15805	COG4591	ABC-type transport system involved in lipoprotein release permease component
CPZ98_RS15820	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
CPZ98_RS15825	COG1177	transmembrane transport
CPZ98_RS15835	COG3842	ATPase activity
CPZ98_RS15845	COG2850	peptidyl-arginine hydroxylation
CPZ98_RS15970	COG4626	Terminase
CPZ98_RS15970	COG1802	Transcriptional regulator
CPZ98_RS15990	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
CPZ98_RS16015	COG0538	isocitrate dehydrogenase activity
CPZ98_RS16025	COG2200	EAL domain
CPZ98_RS16075	COG2894	cell division
CPZ98_RS16120	COG0179	Fumarylacetoacetate (FAA) hydrolase
CPZ98_RS16135	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
CPZ98_RS16140	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
CPZ98_RS16160	COG2719	SpoVR family
CPZ98_RS16170	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
CPZ98_RS16190	COG1619	proteins homologs of microcin C7 resistance protein MccF
CPZ98_RS16200	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
CPZ98_RS16215	COG0157	Belongs to the NadC ModD family
CPZ98_RS16220	COG0500	methyltransferase
CPZ98_RS16225	COG1120	ATPase activity
CPZ98_RS16230	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
CPZ98_RS16235	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
CPZ98_RS16260	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CPZ98_RS16260	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
CPZ98_RS16260	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPZ98_RS16265	COG1461	Dihydroxyacetone kinase
CPZ98_RS16270	COG2376	Dihydroxyacetone kinase
CPZ98_RS16275	COG3284	Transcriptional regulator
CPZ98_RS16280	COG3468	outer membrane autotransporter barrel domain protein
CPZ98_RS16285	COG0012	GTP binding
CPZ98_RS16300	COG0659	secondary active sulfate transmembrane transporter activity
CPZ98_RS16305	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
CPZ98_RS16330	COG2890	protein-(glutamine-N5) methyltransferase activity
CPZ98_RS16335	COG3094	Invasion gene expression up-regulator, SirB
CPZ98_RS16340	COG2912	Transglutaminase-like superfamily
CPZ98_RS16355	COG0387	Pfam Sodium calcium exchanger
CPZ98_RS16360	COG4572	Cation transport regulator
CPZ98_RS16365	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
CPZ98_RS16370	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
CPZ98_RS16375	COG4932	domain protein
CPZ98_RS16380	COG2197	response regulator
CPZ98_RS16385	COG3850	Histidine kinase
CPZ98_RS16390	COG2223	nitrite transmembrane transporter activity
CPZ98_RS16395	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
CPZ98_RS16400	COG1140	nitrate reductase beta subunit
CPZ98_RS16405	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
CPZ98_RS16410	COG2181	nitrate reductase activity
CPZ98_RS16430	COG0788	formyltetrahydrofolate deformylase activity
CPZ98_RS16440	COG1752	Esterase of the alpha-beta hydrolase superfamily
CPZ98_RS16445	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS16450	COG1210	Utp--glucose-1-phosphate uridylyltransferase
CPZ98_RS16460	COG1435	thymidine kinase activity
CPZ98_RS16465	COG3385	transposase activity
CPZ98_RS16470	COG1454	alcohol dehydrogenase
CPZ98_RS16470	COG1012	belongs to the aldehyde dehydrogenase family
CPZ98_RS16475	COG2095	MarC family integral membrane protein
CPZ98_RS16480	COG4166	transmembrane transport
CPZ98_RS16485	COG0601	transmembrane transport
CPZ98_RS16490	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CPZ98_RS16495	COG0444	Belongs to the ABC transporter superfamily
CPZ98_RS16500	COG4608	Belongs to the ABC transporter superfamily
CPZ98_RS16520	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
CPZ98_RS16530	COG2350	Protein conserved in bacteria
CPZ98_RS16535	COG0810	Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins
CPZ98_RS16540	COG1607	acyl-coa hydrolase
CPZ98_RS16560	COG3047	cAMP biosynthetic process
CPZ98_RS16565	COG3685	Protein conserved in bacteria
CPZ98_RS16570	COG3685	Protein conserved in bacteria
CPZ98_RS16575	COG3729	General stress protein
CPZ98_RS16590	COG0135	phosphoribosylanthranilate isomerase activity
CPZ98_RS16590	COG0134	indole-3-glycerol-phosphate synthase activity
CPZ98_RS16595	COG0512	Glutamine amidotransferase of anthranilate synthase
CPZ98_RS16595	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
CPZ98_RS16600	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CPZ98_RS16610	COG0613	PHP domain protein
CPZ98_RS16615	COG0009	L-threonylcarbamoyladenylate synthase
CPZ98_RS16625	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
CPZ98_RS16630	COG1028	Short-chain dehydrogenase reductase Sdr
CPZ98_RS16635	COG0616	signal peptide processing
CPZ98_RS16645	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CPZ98_RS16650	COG0583	DNA-binding transcription factor activity
CPZ98_RS16675	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
CPZ98_RS16685	COG0671	phosphoesterase, PA-phosphatase related
CPZ98_RS16690	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
CPZ98_RS16695	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
CPZ98_RS16705	COG0023	Translation Initiation Factor
CPZ98_RS16715	COG1349	DNA-binding transcription factor activity
CPZ98_RS16740	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CPZ98_RS16740	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CPZ98_RS16745	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
CPZ98_RS16750	COG2852	Protein conserved in bacteria
CPZ98_RS16755	COG4172	Belongs to the ABC transporter superfamily
CPZ98_RS16760	COG4172	Belongs to the ABC transporter superfamily
CPZ98_RS16765	COG4171	peptide transport system, permease
CPZ98_RS16770	COG4168	peptide transport system, permease
CPZ98_RS16775	COG4166	transmembrane transport
CPZ98_RS16785	COG0531	amino acid
CPZ98_RS16795	COG0174	glutamine synthetase
CPZ98_RS16805	COG1396	sequence-specific DNA binding
CPZ98_RS16805	COG1917	Cupin 2, conserved barrel domain protein
CPZ98_RS16810	COG1012	belongs to the aldehyde dehydrogenase family
CPZ98_RS16815	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
CPZ98_RS16820	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
CPZ98_RS16825	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
CPZ98_RS16830	COG1842	Phage shock protein A
CPZ98_RS16840	COG1983	PspC domain protein
CPZ98_RS16850	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
CPZ98_RS16875	COG1175	transmembrane transport
CPZ98_RS16880	COG0395	ABC-type sugar transport system, permease component
CPZ98_RS16885	COG1063	alcohol dehydrogenase
CPZ98_RS16900	COG1554	hydrolase, family 65, central catalytic
CPZ98_RS16905	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CPZ98_RS16920	COG1609	Transcriptional regulator
CPZ98_RS16925	COG3106	COG3106 Predicted ATPase
CPZ98_RS16935	COG3283	Transcriptional regulator of aromatic amino acids metabolism
CPZ98_RS16940	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
CPZ98_RS16945	COG4948	Mandelate Racemase Muconate Lactonizing
CPZ98_RS16950	COG2866	Carboxypeptidase
CPZ98_RS16955	COG0702	epimerase
CPZ98_RS16960	COG1073	alpha beta
CPZ98_RS16965	COG1073	alpha beta
CPZ98_RS16970	COG1073	alpha beta
CPZ98_RS16975	COG0583	DNA-binding transcription factor activity
CPZ98_RS16995	COG3756	Protein conserved in bacteria
CPZ98_RS17000	COG1484	DNA-dependent DNA replication
CPZ98_RS17155	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CPZ98_RS17160	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CPZ98_RS17165	COG1121	(ABC) transporter
CPZ98_RS17175	COG0582	viral genome integration into host DNA
CPZ98_RS17315	COG2995	paraquat-inducible protein a
CPZ98_RS17320	COG1956	GAF domain-containing protein
CPZ98_RS17330	COG0793	Belongs to the peptidase S41A family
CPZ98_RS17340	COG2814	Major facilitator Superfamily
CPZ98_RS17345	COG1414	Transcriptional regulator
CPZ98_RS17375	COG2226	methyltransferase
CPZ98_RS17395	COG3716	PTS system mannose fructose sorbose family IID component
CPZ98_RS17400	COG3715	PTS system
CPZ98_RS17405	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPZ98_RS17405	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPZ98_RS17410	COG1253	flavin adenine dinucleotide binding
CPZ98_RS17415	COG2200	EAL domain
CPZ98_RS17420	COG1760	l-serine dehydratase
CPZ98_RS17430	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
CPZ98_RS17445	COG0251	oxidation-reduction process
CPZ98_RS17450	COG1199	ATP-dependent helicase activity
CPZ98_RS17455	COG1214	PFAM Peptidase M22, glycoprotease
CPZ98_RS17460	COG3065	identical protein binding
CPZ98_RS17465	COG0318	PFAM AMP-dependent synthetase and ligase
CPZ98_RS17470	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
CPZ98_RS17475	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CPZ98_RS17480	COG4638	Rieske (2fe-2S)
CPZ98_RS17505	COG3713	MltA-interacting MipA family protein
CPZ98_RS17510	COG0656	L-ascorbic acid biosynthetic process
CPZ98_RS17515	COG0676	glucose-6-phosphate 1-epimerase activity
CPZ98_RS17520	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CPZ98_RS17530	COG3139	Protein of unknown function (DUF1315)
CPZ98_RS17535	COG1063	alcohol dehydrogenase
CPZ98_RS17540	COG2271	Major facilitator Superfamily
CPZ98_RS17550	COG0191	fructose-bisphosphate aldolase activity
CPZ98_RS17555	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPZ98_RS17560	COG0667	Aldo Keto reductase
CPZ98_RS17565	COG1349	DNA-binding transcription factor activity
CPZ98_RS17570	COG2814	Major facilitator Superfamily
CPZ98_RS17575	COG1335	isochorismatase
CPZ98_RS17580	COG0252	asparaginase activity
CPZ98_RS17585	COG0616	signal peptide processing
CPZ98_RS17590	COG0778	Nitroreductase
CPZ98_RS17600	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CPZ98_RS17610	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
CPZ98_RS17620	COG0494	nUDIX hydrolase
CPZ98_RS17625	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CPZ98_RS17635	COG4136	ATPase activity
CPZ98_RS17650	COG3385	transposase activity
CPZ98_RS17655	COG4134	Bacterial extracellular solute-binding protein
CPZ98_RS17660	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
CPZ98_RS17665	COG0398	Pfam SNARE associated Golgi protein
CPZ98_RS17680	COG0398	Pfam SNARE associated Golgi protein
CPZ98_RS17685	COG0708	Exodeoxyribonuclease III
CPZ98_RS17715	COG3678	ATP-independent chaperone mediated protein folding
CPZ98_RS17735	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
CPZ98_RS17745	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CPZ98_RS17750	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
CPZ98_RS17755	COG1447	Phosphotransferase system cellobiose-specific component IIA
CPZ98_RS17765	COG1486	melibiose metabolic process
CPZ98_RS17775	COG0753	catalase activity
CPZ98_RS17795	COG1988	membrane-bound metal-dependent
CPZ98_RS17800	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CPZ98_RS17810	COG3001	Fructosamine kinase
CPZ98_RS17820	COG1105	Belongs to the carbohydrate kinase PfkB family
CPZ98_RS17825	COG3137	Salt-induced outer membrane protein
CPZ98_RS17895	COG0386	Belongs to the glutathione peroxidase family
CPZ98_RS17905	COG0791	NLP P60 protein
CPZ98_RS17910	COG2200	EAL domain
CPZ98_RS17920	COG4256	Hemin uptake protein
CPZ98_RS17935	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CPZ98_RS17935	COG0574	Belongs to the PEP-utilizing enzyme family
CPZ98_RS17940	COG0318	PFAM AMP-dependent synthetase and ligase
CPZ98_RS17945	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
CPZ98_RS17950	COG0644	oxidoreductase
CPZ98_RS17960	COG2086	electron transfer activity
CPZ98_RS17965	COG1917	Cupin 2, conserved barrel domain protein
CPZ98_RS17965	COG2207	Transcriptional regulator
CPZ98_RS17975	COG3119	arylsulfatase activity
CPZ98_RS18015	COG3077	Addiction module antitoxin, RelB DinJ family
CPZ98_RS18020	COG2026	Addiction module toxin, RelE StbE family
CPZ98_RS18040	COG1403	HNH endonuclease
CPZ98_RS18045	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
CPZ98_RS18050	COG0484	heat shock protein binding
CPZ98_RS18100	COG0246	Mannitol dehydrogenase
CPZ98_RS18110	COG1802	Transcriptional regulator
CPZ98_RS18120	COG0339	signal peptide processing
CPZ98_RS18125	COG1546	Belongs to the CinA family
CPZ98_RS18145	COG2814	Major facilitator Superfamily
CPZ98_RS18150	COG0697	spore germination
CPZ98_RS18160	COG4977	sequence-specific DNA binding
CPZ98_RS18165	COG1846	Transcriptional regulator
CPZ98_RS18185	COG1012	belongs to the aldehyde dehydrogenase family
CPZ98_RS18200	COG2199	diguanylate cyclase activity
CPZ98_RS18225	COG3781	membrane
CPZ98_RS18290	COG4948	Mandelate Racemase Muconate Lactonizing
CPZ98_RS18355	COG0243	molybdopterin cofactor binding
CPZ98_RS18365	COG0437	4 iron, 4 sulfur cluster binding
CPZ98_RS18370	COG3302	dmso reductase anchor subunit
CPZ98_RS18375	COG3381	protein complex oligomerization
CPZ98_RS18385	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
CPZ98_RS18390	COG1940	carbohydrate kinase activity
CPZ98_RS18395	COG0583	DNA-binding transcription factor activity
CPZ98_RS18415	COG3591	Belongs to the peptidase S1B family
CPZ98_RS18435	COG0628	permease
CPZ98_RS18440	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
CPZ98_RS18445	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
CPZ98_RS18455	COG0531	amino acid
CPZ98_RS18465	COG3136	membrane protein required for alginate biosynthesis
CPZ98_RS18470	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS18475	COG1823	symporter activity
CPZ98_RS18480	COG2205	protein histidine kinase activity
CPZ98_RS18495	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
CPZ98_RS18495	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
CPZ98_RS18505	COG5339	Protein conserved in bacteria
CPZ98_RS18520	COG3250	beta-galactosidase activity
CPZ98_RS18525	COG1309	transcriptional regulator
CPZ98_RS18540	COG1609	Transcriptional regulator
CPZ98_RS18545	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
CPZ98_RS18545	COG1263	PTS System
CPZ98_RS18550	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
CPZ98_RS18560	COG0673	inositol 2-dehydrogenase activity
CPZ98_RS18600	COG4659	FMN binding
CPZ98_RS18610	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
CPZ98_RS18620	COG3104	oligopeptide transport
CPZ98_RS18625	COG0625	glutathione transferase activity
CPZ98_RS18665	COG3133	Outer membrane lipoprotein
CPZ98_RS18680	COG1566	PFAM secretion protein HlyD family protein
CPZ98_RS18690	COG2032	superoxide dismutase activity
CPZ98_RS18695	COG4989	oxidoreductase activity
CPZ98_RS18700	COG3313	Fe-S protein
CPZ98_RS18705	COG1309	transcriptional regulator
CPZ98_RS18710	COG1902	pentaerythritol trinitrate reductase activity
CPZ98_RS18715	COG0346	lactoylglutathione lyase activity
CPZ98_RS18730	COG0675	Transposase, IS605 OrfB family
CPZ98_RS18740	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
CPZ98_RS18745	COG0791	NLP P60 protein
CPZ98_RS18750	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
CPZ98_RS18755	COG2814	Major facilitator Superfamily
CPZ98_RS18770	COG0583	DNA-binding transcription factor activity
CPZ98_RS18775	COG2814	Major facilitator Superfamily
CPZ98_RS18780	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
CPZ98_RS18785	COG0307	riboflavin synthase, alpha
CPZ98_RS18795	COG3468	outer membrane autotransporter barrel domain protein
CPZ98_RS18815	COG4529	Protein conserved in bacteria
CPZ98_RS18825	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
CPZ98_RS18830	COG0437	4 iron, 4 sulfur cluster binding
CPZ98_RS18850	COG2414	aldehyde ferredoxin oxidoreductase
CPZ98_RS18855	COG0437	4 iron, 4 sulfur cluster binding
CPZ98_RS18870	COG0469	pyruvate kinase activity
CPZ98_RS18875	COG4238	major outer membrane lipoprotein
CPZ98_RS18880	COG1376	ErfK ybiS ycfS ynhG family protein
CPZ98_RS18895	COG0719	Fe-S assembly protein
CPZ98_RS18900	COG0396	ATPase activity
CPZ98_RS18905	COG0719	Fe-S assembly protein
CPZ98_RS18910	COG0316	Belongs to the HesB IscA family
CPZ98_RS18920	COG2050	protein possibly involved in aromatic compounds catabolism
CPZ98_RS18925	COG0247	lactate metabolic process
CPZ98_RS18925	COG0277	FAD linked oxidase domain protein
CPZ98_RS18930	COG0628	permease
CPZ98_RS18945	COG0738	Major facilitator superfamily
CPZ98_RS18950	COG2271	Major facilitator Superfamily
CPZ98_RS18975	COG0641	radical SAM
CPZ98_RS18990	COG4771	TonB-dependent receptor
CPZ98_RS18995	COG0612	Peptidase, M16
CPZ98_RS19005	COG0076	glutamate decarboxylase activity
CPZ98_RS19010	COG0531	amino acid
CPZ98_RS19015	COG1649	PFAM Uncharacterised BCR, COG1649
CPZ98_RS19035	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
CPZ98_RS19040	COG0444	Belongs to the ABC transporter superfamily
CPZ98_RS19050	COG1764	response to oxidative stress
CPZ98_RS19065	COG1064	alcohol dehydrogenase
CPZ98_RS19070	COG3093	addiction module antidote protein HigA
CPZ98_RS19075	COG2864	formate dehydrogenase
CPZ98_RS19080	COG0437	4 iron, 4 sulfur cluster binding
CPZ98_RS19095	COG0697	spore germination
CPZ98_RS19110	COG4886	Leucine-rich repeat (LRR) protein
CPZ98_RS19125	COG2223	nitrite transmembrane transporter activity
CPZ98_RS19135	COG1140	nitrate reductase beta subunit
CPZ98_RS19150	COG1802	Transcriptional regulator
CPZ98_RS19155	COG2130	NADP-dependent
CPZ98_RS19170	COG1247	-acetyltransferase
CPZ98_RS19175	COG3238	Protein conserved in bacteria
CPZ98_RS19205	COG1177	transmembrane transport
CPZ98_RS19245	COG0500	methyltransferase
CPZ98_RS19250	COG1275	C4-dicarboxylate transporter malic acid transport protein
CPZ98_RS19255	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
CPZ98_RS19260	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
CPZ98_RS19265	COG2841	Protein conserved in bacteria
CPZ98_RS19275	COG5383	Protein conserved in bacteria
CPZ98_RS19280	COG0583	DNA-binding transcription factor activity
CPZ98_RS19285	COG0840	transmembrane signaling receptor activity
CPZ98_RS19325	COG3038	cytochrome b561
CPZ98_RS19330	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
CPZ98_RS19335	COG1012	belongs to the aldehyde dehydrogenase family
CPZ98_RS19365	COG1643	Atp-dependent helicase
CPZ98_RS19390	COG2267	carboxylic ester hydrolase activity
CPZ98_RS19395	COG4589	Belongs to the CDS family
CPZ98_RS19400	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
CPZ98_RS19420	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
CPZ98_RS19425	COG2911	Protein conserved in bacteria
CPZ98_RS19435	COG3784	Protein of unknown function (DUF1318)
CPZ98_RS19450	COG3042	response to heat
CPZ98_RS19455	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CPZ98_RS19455	COG1013	pyruvate-flavodoxin oxidoreductase activity
CPZ98_RS19455	COG0674	pyruvate-flavodoxin oxidoreductase activity
CPZ98_RS19455	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
CPZ98_RS19465	COG0589	response to stress
CPZ98_RS19475	COG0513	Belongs to the DEAD box helicase family
CPZ98_RS19490	COG2840	Smr protein MutS2
CPZ98_RS19520	COG2207	Transcriptional regulator
CPZ98_RS19530	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CPZ98_RS19535	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
CPZ98_RS19540	COG0589	response to stress
CPZ98_RS19570	COG0668	transmembrane transport
CPZ98_RS19575	COG4166	transmembrane transport
CPZ98_RS19620	COG2372	response to copper ion
CPZ98_RS19635	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
CPZ98_RS19645	COG2979	Protein of unknown function (DUF533)
CPZ98_RS19665	COG0800	Aldolase
CPZ98_RS19685	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
CPZ98_RS19690	COG1737	Transcriptional regulator
CPZ98_RS19695	COG0469	pyruvate kinase activity
CPZ98_RS19705	COG0739	heme binding
CPZ98_RS19710	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
CPZ98_RS19720	COG1108	ABC-type Mn2 Zn2 transport systems permease components
CPZ98_RS19750	COG0217	transcriptional regulatory protein
CPZ98_RS19755	COG0494	nUDIX hydrolase
CPZ98_RS19765	COG1335	isochorismatase
CPZ98_RS19770	COG3547	Transposase (IS116 IS110 IS902 family)
CPZ98_RS19805	COG5301	cellulose 1,4-beta-cellobiosidase activity
CPZ98_RS19880	COG3547	Transposase (IS116 IS110 IS902 family)
CPZ98_RS19920	COG1801	Protein of unknown function DUF72
CPZ98_RS19925	COG3788	relative of glutathione S-transferase, MAPEG superfamily
CPZ98_RS19940	COG0243	molybdopterin cofactor binding
CPZ98_RS19945	COG3005	denitrification pathway
CPZ98_RS19955	COG3102	Protein conserved in bacteria
CPZ98_RS19965	COG3755	Protein conserved in bacteria
CPZ98_RS19985	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CPZ98_RS19990	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CPZ98_RS19995	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
CPZ98_RS20030	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
CPZ98_RS20035	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS20045	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
CPZ98_RS20050	COG0840	transmembrane signaling receptor activity
CPZ98_RS20065	COG0840	transmembrane signaling receptor activity
CPZ98_RS20070	COG0835	chemotaxis
CPZ98_RS20075	COG2198	Histidine kinase
CPZ98_RS20075	COG0643	Histidine kinase
CPZ98_RS20080	COG1360	Flagellar Motor Protein
CPZ98_RS20085	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
CPZ98_RS20105	COG0589	response to stress
CPZ98_RS20115	COG1877	trehalose-phosphatase activity
CPZ98_RS20120	COG1172	Belongs to the binding-protein-dependent transport system permease family
CPZ98_RS20135	COG1528	Iron-storage protein
CPZ98_RS20155	COG1528	Iron-storage protein
CPZ98_RS20165	COG0814	amino acid
CPZ98_RS20170	COG3318	Belongs to the UPF0149 family
CPZ98_RS20170	COG3012	SEC-C Motif Domain Protein
CPZ98_RS20200	COG2197	response regulator
CPZ98_RS20215	COG2197	response regulator
CPZ98_RS20220	COG1126	abc transporter atp-binding protein
CPZ98_RS20225	COG0765	amino acid transport
CPZ98_RS20235	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPZ98_RS20245	COG1191	sigma factor activity
CPZ98_RS20255	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
CPZ98_RS20260	COG1516	flagellar protein fliS
CPZ98_RS20270	COG0366	Alpha amylase catalytic
CPZ98_RS20280	COG2391	methyltransferase activity
CPZ98_RS20285	COG0425	Belongs to the sulfur carrier protein TusA family
CPZ98_RS20320	COG1881	PFAM PEBP family protein
CPZ98_RS20325	COG2076	Multidrug Resistance protein
CPZ98_RS20345	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CPZ98_RS20350	COG1317	bacterial-type flagellum organization
CPZ98_RS20355	COG1157	protein secretion by the type III secretion system
CPZ98_RS20365	COG3144	bacterial-type flagellum assembly
CPZ98_RS20370	COG1580	Controls the rotational direction of flagella during chemotaxis
CPZ98_RS20375	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CPZ98_RS20380	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
CPZ98_RS20385	COG3190	flagellar
CPZ98_RS20390	COG1338	Plays a role in the flagellum-specific transport system
CPZ98_RS20395	COG1987	bacterial-type flagellum assembly
CPZ98_RS20400	COG1684	flagellar biosynthetic protein fliR
CPZ98_RS20405	COG2197	response regulator
CPZ98_RS20435	COG5475	Uncharacterized small protein (DUF2158)
CPZ98_RS20440	COG2354	Protein conserved in bacteria
CPZ98_RS20445	COG0697	spore germination
CPZ98_RS20450	COG3727	T/G mismatch-specific endonuclease activity
CPZ98_RS20455	COG0270	DNA (cytosine-5-)-methyltransferase activity
CPZ98_RS20510	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS20515	COG2351	hydroxyisourate hydrolase activity
CPZ98_RS20530	COG3443	Belongs to the bacterial solute-binding protein 9 family
CPZ98_RS20545	COG0500	methyltransferase
CPZ98_RS20595	COG4386	tail sheath protein
CPZ98_RS20640	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS20685	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
CPZ98_RS20690	COG1403	HNH endonuclease
CPZ98_RS20760	COG0477	Major facilitator Superfamily
CPZ98_RS20775	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
CPZ98_RS20800	COG0583	DNA-binding transcription factor activity
CPZ98_RS20805	COG0583	DNA-binding transcription factor activity
CPZ98_RS20815	COG1376	ErfK ybiS ycfS ynhG family protein
CPZ98_RS20830	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
CPZ98_RS20870	COG1289	transmembrane transporter activity
CPZ98_RS20895	COG4372	Transposase
CPZ98_RS20925	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS20935	COG0582	viral genome integration into host DNA
CPZ98_RS20940	COG2925	Exonuclease
CPZ98_RS20945	COG0425	Belongs to the sulfur carrier protein TusA family
CPZ98_RS20950	COG2391	methyltransferase activity
CPZ98_RS20955	COG0531	amino acid
CPZ98_RS20965	COG0583	DNA-binding transcription factor activity
CPZ98_RS20970	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
CPZ98_RS20975	COG4115	mRNA cleavage
CPZ98_RS21130	COG0438	transferase activity, transferring glycosyl groups
CPZ98_RS21135	COG2327	Polysaccharide pyruvyl transferase
CPZ98_RS21140	COG2244	polysaccharide biosynthetic process
CPZ98_RS21145	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
CPZ98_RS21150	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
CPZ98_RS21155	COG0662	Cupin 2, conserved barrel domain protein
CPZ98_RS21155	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
CPZ98_RS21160	COG0297	glycogen (starch) synthase activity
CPZ98_RS21165	COG1051	belongs to the nudix hydrolase family
CPZ98_RS21175	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
CPZ98_RS21180	COG0110	maltose O-acetyltransferase activity
CPZ98_RS21200	COG0438	transferase activity, transferring glycosyl groups
CPZ98_RS21205	COG1045	serine acetyltransferase
CPZ98_RS21210	COG0463	Glycosyl transferase, family 2
CPZ98_RS21215	COG3206	protein involved in exopolysaccharide biosynthesis
CPZ98_RS21215	COG0489	protein tyrosine kinase activity
CPZ98_RS21220	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
CPZ98_RS21225	COG1596	polysaccharide export
CPZ98_RS21235	COG2982	Protein involved in outer membrane biogenesis
CPZ98_RS21245	COG0572	uridine kinase
CPZ98_RS21255	COG3547	Transposase (IS116 IS110 IS902 family)
CPZ98_RS21260	COG4245	von Willebrand factor, type A
CPZ98_RS21265	COG0631	protein serine/threonine phosphatase activity
CPZ98_RS21270	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
CPZ98_RS21275	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
CPZ98_RS21285	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
CPZ98_RS21295	COG3547	Transposase (IS116 IS110 IS902 family)
CPZ98_RS21320	COG2205	protein histidine kinase activity
CPZ98_RS21325	COG0745	RESPONSE REGULATOR receiver
CPZ98_RS21330	COG3385	transposase activity
CPZ98_RS21340	COG0826	peptidase U32
CPZ98_RS21365	COG1063	alcohol dehydrogenase
CPZ98_RS21370	COG3775	system Galactitol-specific IIC component
CPZ98_RS21375	COG3414	Phosphotransferase system galactitol-specific IIB component
CPZ98_RS21380	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPZ98_RS21395	COG1830	Aldolase
CPZ98_RS21400	COG2211	Major facilitator Superfamily
CPZ98_RS21410	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPZ98_RS21415	COG2188	Transcriptional regulator
CPZ98_RS21420	COG3757	hydrolase, family 25
CPZ98_RS21425	COG0351	phosphomethylpyrimidine kinase
CPZ98_RS21445	COG5455	response to cobalt ion
CPZ98_RS21460	COG3121	Chaperone
CPZ98_RS21465	COG3539	Fimbrial protein
CPZ98_RS21475	COG0489	protein tyrosine kinase activity
CPZ98_RS21500	COG0714	Associated with various cellular activities
CPZ98_RS21505	COG2425	protein containing a von Willebrand factor type A (vWA) domain
CPZ98_RS21510	COG3552	Protein containing von Willebrand factor type A (VWA) domain
CPZ98_RS21515	COG4715	Zinc finger, swim domain protein
CPZ98_RS21525	COG4808	Protein conserved in bacteria
CPZ98_RS21530	COG4807	Protein conserved in bacteria
CPZ98_RS21540	COG3275	phosphorelay sensor kinase activity
CPZ98_RS21545	COG3385	transposase activity
CPZ98_RS21565	COG0500	methyltransferase
CPZ98_RS21585	COG5301	cellulose 1,4-beta-cellobiosidase activity
CPZ98_RS21625	COG0582	viral genome integration into host DNA
CPZ98_RS21630	COG0789	Transcriptional regulator
CPZ98_RS21650	COG1174	glycine betaine transport
CPZ98_RS21655	COG1125	glycine betaine transport
CPZ98_RS21660	COG1174	glycine betaine transport
CPZ98_RS21665	COG1732	Glycine betaine
CPZ98_RS21670	COG1472	Belongs to the glycosyl hydrolase 3 family
CPZ98_RS21675	COG0277	FAD linked oxidase domain protein
CPZ98_RS21680	COG1686	Belongs to the peptidase S11 family
CPZ98_RS21690	COG0586	Pfam SNARE associated Golgi protein
CPZ98_RS21720	COG1346	cytolysis
CPZ98_RS21730	COG2949	membrane
CPZ98_RS21740	COG0493	'glutamate synthase
CPZ98_RS21750	COG4211	Belongs to the binding-protein-dependent transport system permease family
CPZ98_RS21755	COG1129	ABC transporter
CPZ98_RS21760	COG1879	ABC-type sugar transport system periplasmic component
CPZ98_RS21765	COG1609	Transcriptional regulator
CPZ98_RS21770	COG2311	Membrane
CPZ98_RS21785	COG4771	TonB-dependent receptor
CPZ98_RS21790	COG0833	amino acid
CPZ98_RS21795	COG0583	DNA-binding transcription factor activity
CPZ98_RS21800	COG2855	membrane
CPZ98_RS21810	COG1522	sequence-specific DNA binding
CPZ98_RS21810	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPZ98_RS21815	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CPZ98_RS21830	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CPZ98_RS21835	COG2313	pseudouridylate synthase activity
CPZ98_RS21840	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
CPZ98_RS21845	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPZ98_RS21845	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPZ98_RS21845	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
CPZ98_RS21850	COG1105	Belongs to the carbohydrate kinase PfkB family
CPZ98_RS21855	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPZ98_RS21855	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPZ98_RS21860	COG2814	Major facilitator Superfamily
CPZ98_RS21880	COG0246	Mannitol dehydrogenase
CPZ98_RS21885	COG0523	cobalamin synthesis protein
CPZ98_RS21890	COG0671	phosphoesterase, PA-phosphatase related
CPZ98_RS21895	COG0791	NLP P60 protein
CPZ98_RS21900	COG2200	EAL domain
CPZ98_RS21905	COG4166	transmembrane transport
CPZ98_RS21910	COG4174	ABC transporter (Permease)
CPZ98_RS21915	COG4239	(ABC) transporter, permease
CPZ98_RS21920	COG4172	Belongs to the ABC transporter superfamily
CPZ98_RS21930	COG2814	Major facilitator Superfamily
CPZ98_RS21935	COG1187	pseudouridine synthase activity
CPZ98_RS21940	COG1061	Type III restriction enzyme res subunit
CPZ98_RS21960	COG3083	sulfuric ester hydrolase activity
CPZ98_RS21970	COG0582	viral genome integration into host DNA
CPZ98_RS22030	COG2963	transposase activity
CPZ98_RS22035	COG2826	transposase and inactivated derivatives, IS30 family
CPZ98_RS22055	COG3344	reverse transcriptase
CPZ98_RS22080	COG2246	polysaccharide biosynthetic process
CPZ98_RS22085	COG0463	Glycosyl transferase, family 2
CPZ98_RS22125	COG3468	outer membrane autotransporter barrel domain protein
CPZ98_RS22130	COG2197	response regulator
CPZ98_RS22135	COG4235	cytochrome complex assembly
CPZ98_RS22135	COG3088	subunit of a heme lyase
CPZ98_RS22140	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
CPZ98_RS22145	COG1138	Cytochrome C-type biogenesis protein
CPZ98_RS22155	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CPZ98_RS22160	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CPZ98_RS22165	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
CPZ98_RS22175	COG3005	denitrification pathway
CPZ98_RS22180	COG3043	anaerobic respiration
CPZ98_RS22185	COG0348	domain, Protein
CPZ98_RS22190	COG0437	4 iron, 4 sulfur cluster binding
CPZ98_RS22200	COG3062	negative regulation of establishment of protein localization
CPZ98_RS22205	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
CPZ98_RS22205	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
CPZ98_RS22220	COG4615	Cyclic peptide transporter
CPZ98_RS22225	COG3145	DNA-N1-methyladenine dioxygenase activity
CPZ98_RS22230	COG2169	Transcriptional regulator
CPZ98_RS22230	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
CPZ98_RS22235	COG1477	protein flavinylation
CPZ98_RS22245	COG2198	Histidine kinase
CPZ98_RS22245	COG0642	Histidine kinase
CPZ98_RS22250	COG2197	response regulator
CPZ98_RS22255	COG2205	protein histidine kinase activity
CPZ98_RS22255	COG0784	Response regulator, receiver
CPZ98_RS22260	COG4676	Protein conserved in bacteria
CPZ98_RS22265	COG5445	Predicted secreted protein (DUF2300)
CPZ98_RS22290	COG3234	Protein of unknown function (DUF1175)
CPZ98_RS22300	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
CPZ98_RS22310	COG3468	outer membrane autotransporter barrel domain protein
CPZ98_RS22315	COG3468	outer membrane autotransporter barrel domain protein
CPZ98_RS22330	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CPZ98_RS22335	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
CPZ98_RS22340	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
CPZ98_RS22345	COG3642	lipopolysaccharide core region biosynthetic process
CPZ98_RS22360	COG0584	glycerophosphoryl diester phosphodiesterase
CPZ98_RS22365	COG2271	Major facilitator Superfamily
CPZ98_RS22370	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
CPZ98_RS22380	COG0247	lactate metabolic process
CPZ98_RS22385	COG5464	transposase or invertase
CPZ98_RS22455	COG0318	PFAM AMP-dependent synthetase and ligase
CPZ98_RS22465	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
CPZ98_RS22480	COG1169	isochorismate synthase
CPZ98_RS22485	COG4575	ribosome binding
CPZ98_RS22490	COG2153	protein acetylation
CPZ98_RS22530	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
CPZ98_RS22535	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
CPZ98_RS22545	COG0839	Belongs to the complex I subunit 6 family
CPZ98_RS22565	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
CPZ98_RS22570	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
CPZ98_RS22590	COG0583	DNA-binding transcription factor activity
CPZ98_RS22595	COG0436	Aminotransferase
CPZ98_RS22605	COG0471	metal ion transport
CPZ98_RS22605	COG0490	domain, Protein
CPZ98_RS22610	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
CPZ98_RS22625	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
CPZ98_RS22630	COG0280	phosphate acetyltransferase
CPZ98_RS22630	COG0857	belongs to the CobB CobQ family
CPZ98_RS22635	COG1288	antiporter activity
CPZ98_RS22645	COG0622	Phosphoesterase
CPZ98_RS22650	COG0625	glutathione transferase activity
CPZ98_RS22655	COG0625	glutathione transferase activity
CPZ98_RS22660	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
CPZ98_RS22665	COG1090	epimerase
CPZ98_RS22670	COG5464	transposase or invertase
CPZ98_RS22675	COG4598	ABC transporter
CPZ98_RS22680	COG4160	amino acid transport
CPZ98_RS22685	COG4215	(ABC) transporter
CPZ98_RS22690	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPZ98_RS22695	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPZ98_RS22700	COG0163	prenyltransferase activity
CPZ98_RS22705	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
CPZ98_RS22710	COG1286	toxin biosynthetic process
CPZ98_RS22715	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
CPZ98_RS22720	COG0285	dihydrofolate synthase activity
CPZ98_RS22730	COG0586	Pfam SNARE associated Golgi protein
CPZ98_RS22740	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
CPZ98_RS22760	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
CPZ98_RS22775	COG3101	peptidyl-lysine hydroxylation
CPZ98_RS22780	COG0730	response to heat
CPZ98_RS22810	COG3539	Fimbrial protein
CPZ98_RS22815	COG3539	Fimbrial protein
CPZ98_RS22825	COG3539	Fimbrial protein
CPZ98_RS22840	COG3539	Fimbrial protein
CPZ98_RS22845	COG2062	phosphohistidine phosphatase, SixA
CPZ98_RS22860	COG3691	Protein conserved in bacteria
CPZ98_RS22880	COG2116	formate transmembrane transporter activity
CPZ98_RS22890	COG0582	viral genome integration into host DNA
CPZ98_RS22925	COG0477	Major facilitator Superfamily
CPZ98_RS22930	COG1566	PFAM secretion protein HlyD family protein
CPZ98_RS22935	COG2197	response regulator
CPZ98_RS22940	COG0784	Response regulator, receiver
CPZ98_RS22940	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
CPZ98_RS22940	COG2198	Histidine kinase
CPZ98_RS22940	COG2205	protein histidine kinase activity
CPZ98_RS22945	COG1804	L-carnitine dehydratase bile acid-inducible protein F
CPZ98_RS22950	COG0679	Auxin Efflux Carrier
CPZ98_RS22955	COG0028	Belongs to the TPP enzyme family
CPZ98_RS22980	COG1560	Kdo2-lipid A biosynthetic process
CPZ98_RS22990	COG0436	Aminotransferase
CPZ98_RS23000	COG3279	Response regulator of the LytR AlgR family
CPZ98_RS23005	COG2207	Transcriptional regulator
CPZ98_RS23015	COG1363	Peptidase, m42
CPZ98_RS23025	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
CPZ98_RS23055	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
CPZ98_RS23075	COG3415	Transposase
CPZ98_RS23080	COG3415	Transposase
CPZ98_RS23115	COG0583	DNA-binding transcription factor activity
CPZ98_RS23120	COG0385	Bile acid
CPZ98_RS23125	COG3530	Putative quorum-sensing-regulated virulence factor
CPZ98_RS23145	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CPZ98_RS23150	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
CPZ98_RS23155	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
CPZ98_RS23160	COG2190	(PTS) system
CPZ98_RS23180	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
CPZ98_RS23190	COG4208	sulfate ABC transporter
CPZ98_RS23195	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
CPZ98_RS23200	COG4150	thiosulfate binding
CPZ98_RS23205	COG1028	Short-chain dehydrogenase reductase Sdr
CPZ98_RS23225	COG2837	iron assimilation
CPZ98_RS23340	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
CPZ98_RS23345	COG3272	Protein of unknown function (DUF1722)
CPZ98_RS23350	COG2351	hydroxyisourate hydrolase activity
CPZ98_RS23355	COG0789	Transcriptional regulator
CPZ98_RS23455	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
CPZ98_RS23480	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
CPZ98_RS23485	COG2948	multi-organism process
CPZ98_RS23570	COG4974	Belongs to the 'phage' integrase family
CPZ98_RS23610	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
CPZ98_RS23615	COG3077	Addiction module antitoxin, RelB DinJ family
CPZ98_RS23620	COG2026	Addiction module toxin, RelE StbE family
CPZ98_RS23725	COG1695	Transcriptional regulator
CPZ98_RS23760	COG3173	Aminoglycoside phosphotransferase
CPZ98_RS23920	COG1475	DNA binding
CPZ98_RS24170	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
CPZ98_RS24300	COG4372	Transposase
CPZ98_RS24370	COG4771	TonB-dependent receptor
CPZ98_RS24380	COG3547	Transposase (IS116 IS110 IS902 family)
CPZ98_RS24445	COG3344	reverse transcriptase
CPZ98_RS24570	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS24580	COG3385	transposase activity
CPZ98_RS24800	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
CPZ98_RS24850	COG2990	Protein conserved in bacteria
CPZ98_RS24855	COG0297	glycogen (starch) synthase activity
CPZ98_RS24860	COG0726	polysaccharide deacetylase
CPZ98_RS24890	COG3385	transposase activity
CPZ98_RS24980	COG4372	Transposase
CPZ98_RS24985	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS25025	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS25185	COG3344	reverse transcriptase
CPZ98_RS25470	COG3547	Transposase (IS116 IS110 IS902 family)
CPZ98_RS25505	COG3436	PFAM IS66 Orf2 family protein
CPZ98_RS25510	COG4372	Transposase
CPZ98_RS25575	COG1475	DNA binding
CPZ98_RS25585	COG3547	Transposase (IS116 IS110 IS902 family)
CPZ98_RS25690	COG2271	Major facilitator Superfamily