locus-tag	class	description
C1P82_RS00010	COG0456	acetyltransferase
C1P82_RS00035	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
C1P82_RS00040	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
C1P82_RS00050	COG2864	formate dehydrogenase
C1P82_RS00055	COG0437	4 iron, 4 sulfur cluster binding
C1P82_RS00085	COG1278	Cold shock
C1P82_RS00090	COG2944	sequence-specific DNA binding
C1P82_RS00105	COG2885	chlorophyll binding
C1P82_RS00110	COG0243	molybdopterin cofactor binding
C1P82_RS00115	COG0456	acetyltransferase
C1P82_RS00120	COG2818	Glycosylase
C1P82_RS00125	COG5571	outer membrane autotransporter
C1P82_RS00130	COG2223	nitrite transmembrane transporter activity
C1P82_RS00135	COG2194	sulfuric ester hydrolase activity
C1P82_RS00145	COG0747	negative chemotaxis
C1P82_RS00155	COG0601	transmembrane transport
C1P82_RS00160	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1P82_RS00165	COG0444	Belongs to the ABC transporter superfamily
C1P82_RS00170	COG4608	Belongs to the ABC transporter superfamily
C1P82_RS00175	COG0814	amino acid
C1P82_RS00205	COG2194	sulfuric ester hydrolase activity
C1P82_RS00240	COG1215	transferase activity, transferring glycosyl groups
C1P82_RS00250	COG1215	transferase activity, transferring glycosyl groups
C1P82_RS00255	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
C1P82_RS00275	COG2200	EAL domain
C1P82_RS00275	COG2199	diguanylate cyclase activity
C1P82_RS00285	COG0612	Peptidase, M16
C1P82_RS00295	COG2200	EAL domain
C1P82_RS00300	COG2982	Protein involved in outer membrane biogenesis
C1P82_RS00305	COG0477	Major facilitator Superfamily
C1P82_RS00310	COG1295	ribonuclease BN
C1P82_RS00315	COG0583	DNA-binding transcription factor activity
C1P82_RS00320	COG2197	response regulator
C1P82_RS00325	COG3385	transposase activity
C1P82_RS00365	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
C1P82_RS00380	COG3678	ATP-independent chaperone mediated protein folding
C1P82_RS00385	COG0745	RESPONSE REGULATOR receiver
C1P82_RS00390	COG2205	protein histidine kinase activity
C1P82_RS00395	COG2258	MOSC domain
C1P82_RS00410	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
C1P82_RS00450	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P82_RS00455	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P82_RS00455	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P82_RS00460	COG1363	Peptidase, m42
C1P82_RS00465	COG3711	transcriptional antiterminator
C1P82_RS00465	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P82_RS00475	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C1P82_RS00485	COG2771	luxR family
C1P82_RS00490	COG3247	response to pH
C1P82_RS00515	COG3065	identical protein binding
C1P82_RS00540	COG1393	Belongs to the ArsC family
C1P82_RS00545	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
C1P82_RS00550	COG0640	Transcriptional regulator
C1P82_RS00560	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C1P82_RS00565	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
C1P82_RS00570	COG0339	signal peptide processing
C1P82_RS00590	COG0589	response to stress
C1P82_RS00600	COG0306	phosphate transporter
C1P82_RS00605	COG2081	HI0933 family
C1P82_RS00690	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C1P82_RS00695	COG1129	ABC transporter
C1P82_RS00695	COG0842	Transport permease protein
C1P82_RS00700	COG0842	Transport permease protein
C1P82_RS00730	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1P82_RS00735	COG0601	transmembrane transport
C1P82_RS00740	COG0747	negative chemotaxis
C1P82_RS00745	COG2091	lysine biosynthetic process via aminoadipic acid
C1P82_RS00750	COG0628	permease
C1P82_RS00765	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
C1P82_RS00780	COG3714	YhhN family
C1P82_RS00790	COG3776	membrane
C1P82_RS00795	COG0742	ribosomal rna small subunit methyltransferase
C1P82_RS00800	COG0552	protein localization to endoplasmic reticulum
C1P82_RS00805	COG2884	Cell division ATP-binding protein ftsE
C1P82_RS00810	COG2177	Part of the ABC transporter FtsEX involved in
C1P82_RS00815	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C1P82_RS00820	COG0683	leucine binding
C1P82_RS00825	COG0456	acetyltransferase
C1P82_RS00830	COG0683	leucine binding
C1P82_RS00835	COG0559	Belongs to the binding-protein-dependent transport system permease family
C1P82_RS00840	COG4177	L-phenylalanine transmembrane transporter activity
C1P82_RS00845	COG0411	ABC transporter
C1P82_RS00850	COG0410	ABC transporter
C1P82_RS00875	COG0584	glycerophosphoryl diester phosphodiesterase
C1P82_RS00885	COG0405	Gamma-glutamyltransferase
C1P82_RS00890	COG1247	-acetyltransferase
C1P82_RS00895	COG0673	inositol 2-dehydrogenase activity
C1P82_RS00900	COG1741	Belongs to the pirin family
C1P82_RS00905	COG1609	Transcriptional regulator
C1P82_RS00910	COG3265	gluconokinase activity
C1P82_RS00920	COG2095	MarC family integral membrane protein
C1P82_RS00925	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
C1P82_RS00950	COG0058	SHG alpha-glucan phosphorylase activity
C1P82_RS00955	COG3385	transposase activity
C1P82_RS00965	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
C1P82_RS00980	COG1349	DNA-binding transcription factor activity
C1P82_RS00985	COG4650	regulator
C1P82_RS00990	COG1690	Belongs to the RtcB family
C1P82_RS01005	COG0058	SHG alpha-glucan phosphorylase activity
C1P82_RS01010	COG1640	4-alpha-glucanotransferase
C1P82_RS01015	COG2610	gluconate transmembrane transporter activity
C1P82_RS01050	COG5464	transposase or invertase
C1P82_RS01065	COG1918	ferrous iron import across plasma membrane
C1P82_RS01070	COG2183	response to ionizing radiation
C1P82_RS01075	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
C1P82_RS01095	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
C1P82_RS01105	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
C1P82_RS01110	COG1011	Hydrolase
C1P82_RS01120	COG0494	nUDIX hydrolase
C1P82_RS01125	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
C1P82_RS01130	COG4972	Pilus assembly protein
C1P82_RS01135	COG3166	PFAM Fimbrial assembly family protein
C1P82_RS01150	COG4796	Type ii and iii secretion system protein
C1P82_RS01165	COG3266	domain, Protein
C1P82_RS01170	COG0338	D12 class N6 adenine-specific DNA methyltransferase
C1P82_RS01175	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
C1P82_RS01190	COG2188	Transcriptional regulator
C1P82_RS01200	COG3457	Alanine racemase
C1P82_RS01205	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
C1P82_RS01210	COG1735	metal-dependent hydrolase with the TIM-barrel fold
C1P82_RS01225	COG0626	cystathionine gamma-synthase activity
C1P82_RS01230	COG2188	Transcriptional regulator
C1P82_RS01240	COG1082	Xylose isomerase domain protein TIM barrel
C1P82_RS01245	COG2222	sugar isomerase
C1P82_RS01265	COG2116	formate transmembrane transporter activity
C1P82_RS01270	COG2146	nitrite reductase [NAD(P)H] activity
C1P82_RS01275	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C1P82_RS01290	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
C1P82_RS01300	COG2184	nucleotidyltransferase activity
C1P82_RS01305	COG0512	Glutamine amidotransferase of anthranilate synthase
C1P82_RS01315	COG1289	transmembrane transporter activity
C1P82_RS01320	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C1P82_RS01325	COG1765	OsmC-like protein
C1P82_RS01330	COG3954	Phosphoribulokinase
C1P82_RS01340	COG0429	hydrolase of the alpha beta-hydrolase fold
C1P82_RS01345	COG0488	(ABC) transporter
C1P82_RS01360	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
C1P82_RS01365	COG1047	Peptidyl-prolyl cis-trans
C1P82_RS01375	COG0545	Peptidyl-prolyl cis-trans isomerase
C1P82_RS01380	COG2964	Protein conserved in bacteria
C1P82_RS01455	COG0089	rRNA binding
C1P82_RS01545	COG0201	protein transport
C1P82_RS01585	COG4372	Transposase
C1P82_RS01590	COG3436	PFAM IS66 Orf2 family protein
C1P82_RS01600	COG0569	domain protein
C1P82_RS01620	COG0758	DNA mediated transformation
C1P82_RS01630	COG0551	DNA topoisomerase type I activity
C1P82_RS01650	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
C1P82_RS01690	COG1126	abc transporter atp-binding protein
C1P82_RS01695	COG0765	amino acid transport
C1P82_RS01705	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P82_RS01720	COG2189	Belongs to the N(4) N(6)-methyltransferase family
C1P82_RS01740	COG4145	pantothenate transmembrane transporter activity
C1P82_RS01745	COG3924	membrane
C1P82_RS01750	COG0439	Biotin carboxylase
C1P82_RS01755	COG0511	ligase activity, forming carbon-carbon bonds
C1P82_RS01760	COG0604	alcohol dehydrogenase
C1P82_RS01765	COG2199	diguanylate cyclase activity
C1P82_RS01765	COG2200	EAL domain
C1P82_RS01775	COG1077	Cell shape determining protein MreB Mrl
C1P82_RS01780	COG1792	Involved in formation and maintenance of cell shape
C1P82_RS01785	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
C1P82_RS01795	COG1530	ribonuclease E activity
C1P82_RS01800	COG3164	Protein of unknown function
C1P82_RS01805	COG0312	modulator of DNA gyrase
C1P82_RS01810	COG0583	DNA-binding transcription factor activity
C1P82_RS01830	COG2732	(Barnase) inhibitor
C1P82_RS01850	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1P82_RS01855	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1P82_RS01860	COG3105	Protein conserved in bacteria
C1P82_RS01865	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
C1P82_RS01880	COG0625	glutathione transferase activity
C1P82_RS01885	COG2969	positive regulation of protein catabolic process
C1P82_RS01890	COG3069	C4-dicarboxylate transmembrane transporter activity
C1P82_RS01925	COG2731	YhcH YjgK YiaL family protein
C1P82_RS01935	COG4804	nuclease activity
C1P82_RS01940	COG0493	'glutamate synthase
C1P82_RS01945	COG0067	glutamate synthase
C1P82_RS01945	COG0070	glutamate synthase
C1P82_RS01945	COG0069	glutamate synthase activity
C1P82_RS01950	COG1242	4 iron, 4 sulfur cluster binding
C1P82_RS01955	COG0784	Response regulator, receiver
C1P82_RS01955	COG2198	Histidine kinase
C1P82_RS01955	COG5002	protein histidine kinase activity
C1P82_RS01960	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
C1P82_RS01975	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P82_RS01990	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
C1P82_RS01995	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
C1P82_RS02000	COG1137	ATPase activity
C1P82_RS02005	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
C1P82_RS02010	COG3117	lipopolysaccharide transmembrane transporter activity
C1P82_RS02015	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
C1P82_RS02025	COG0530	calcium, potassium:sodium antiporter activity
C1P82_RS02030	COG1127	ABC transporter
C1P82_RS02035	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
C1P82_RS02040	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
C1P82_RS02045	COG2854	intermembrane phospholipid transfer
C1P82_RS02050	COG3113	response to antibiotic
C1P82_RS02055	COG5007	Belongs to the BolA IbaG family
C1P82_RS02065	COG3423	Transcriptional regulator
C1P82_RS02070	COG0142	geranyltranstransferase activity
C1P82_RS02085	COG0697	spore germination
C1P82_RS02095	COG2027	D-alanyl-D-alanine carboxypeptidase
C1P82_RS02100	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
C1P82_RS02105	COG1534	Rna-binding protein
C1P82_RS02115	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
C1P82_RS02120	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
C1P82_RS02130	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
C1P82_RS02160	COG0195	Participates in both transcription termination and antitermination
C1P82_RS02200	COG0513	Belongs to the DEAD box helicase family
C1P82_RS02205	COG0814	amino acid
C1P82_RS02210	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C1P82_RS02215	COG0826	peptidase U32
C1P82_RS02220	COG0826	peptidase U32
C1P82_RS02225	COG3154	lipid carrier protein
C1P82_RS02230	COG3153	acetyltransferase
C1P82_RS02245	COG0693	protein deglycase activity
C1P82_RS02250	COG0702	epimerase
C1P82_RS02255	COG0701	Predicted permease
C1P82_RS02260	COG2823	Periplasmic or secreted lipoprotein
C1P82_RS02280	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
C1P82_RS02285	COG3539	Fimbrial protein
C1P82_RS02305	COG3121	Chaperone
C1P82_RS02310	COG3539	Fimbrial protein
C1P82_RS02320	COG2271	Major facilitator Superfamily
C1P82_RS02335	COG2084	Dehydrogenase
C1P82_RS02340	COG1929	Belongs to the glycerate kinase type-1 family
C1P82_RS02365	COG0583	DNA-binding transcription factor activity
C1P82_RS02370	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
C1P82_RS02380	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
C1P82_RS02385	COG1882	Formate acetyltransferase
C1P82_RS02390	COG0251	oxidation-reduction process
C1P82_RS02395	COG1760	l-serine dehydratase
C1P82_RS02400	COG0814	amino acid
C1P82_RS02415	COG1741	Belongs to the pirin family
C1P82_RS02420	COG0583	DNA-binding transcription factor activity
C1P82_RS02425	COG3152	Membrane
C1P82_RS02430	COG0435	Glutathione S-transferase
C1P82_RS02435	COG2259	Doxx family
C1P82_RS02445	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
C1P82_RS02450	COG4575	ribosome binding
C1P82_RS02465	COG0586	Pfam SNARE associated Golgi protein
C1P82_RS02470	COG2186	Transcriptional regulator
C1P82_RS02490	COG2271	Major facilitator Superfamily
C1P82_RS02500	COG2721	sulfolactate sulfo-lyase activity
C1P82_RS02510	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
C1P82_RS02515	COG0861	Integral membrane protein TerC family
C1P82_RS02520	COG0673	inositol 2-dehydrogenase activity
C1P82_RS02525	COG2949	membrane
C1P82_RS02540	COG4680	protein conserved in bacteria
C1P82_RS02545	COG5499	transcription regulator containing HTH domain
C1P82_RS02550	COG1902	pentaerythritol trinitrate reductase activity
C1P82_RS02550	COG0446	pyridine nucleotide-disulphide oxidoreductase
C1P82_RS02565	COG0531	amino acid
C1P82_RS02570	COG2731	YhcH YjgK YiaL family protein
C1P82_RS02575	COG3250	beta-galactosidase activity
C1P82_RS02580	COG1609	Transcriptional regulator
C1P82_RS02600	COG1695	Transcriptional regulator
C1P82_RS02620	COG3385	transposase activity
C1P82_RS02625	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C1P82_RS02630	COG0358	DNA primase activity
C1P82_RS02635	COG0828	Belongs to the bacterial ribosomal protein bS21 family
C1P82_RS02650	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
C1P82_RS02670	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
C1P82_RS02685	COG4991	sh3 domain protein
C1P82_RS02690	COG3025	triphosphatase activity
C1P82_RS02720	COG2268	Band 7 protein
C1P82_RS02740	COG3385	transposase activity
C1P82_RS02755	COG2960	long-chain fatty acid transporting porin activity
C1P82_RS02770	COG3384	dioxygenase
C1P82_RS02775	COG0754	glutathionylspermidine amidase activity
C1P82_RS02785	COG1538	Outer membrane efflux protein
C1P82_RS02790	COG0494	nUDIX hydrolase
C1P82_RS02795	COG3151	Protein conserved in bacteria
C1P82_RS02800	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
C1P82_RS02805	COG3150	esterase
C1P82_RS02810	COG0187	DNA topoisomerase II activity
C1P82_RS02815	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
C1P82_RS02820	COG2249	NAD(P)H dehydrogenase (quinone) activity
C1P82_RS02830	COG0642	Histidine kinase
C1P82_RS02835	COG0745	RESPONSE REGULATOR receiver
C1P82_RS02840	COG3111	PFAM Bacterial OB fold (BOF) protein
C1P82_RS02845	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
C1P82_RS02850	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
C1P82_RS02855	COG0204	Acyl-transferase
C1P82_RS02860	COG2132	Multicopper oxidase
C1P82_RS02870	COG4238	major outer membrane lipoprotein
C1P82_RS02880	COG0656	L-ascorbic acid biosynthetic process
C1P82_RS02885	COG1979	alcohol dehydrogenase
C1P82_RS02895	COG0586	Pfam SNARE associated Golgi protein
C1P82_RS02900	COG0626	cystathionine gamma-synthase activity
C1P82_RS02905	COG0811	peptide transport
C1P82_RS02910	COG0848	biopolymer transport protein
C1P82_RS02915	COG1028	Short-chain dehydrogenase reductase Sdr
C1P82_RS02925	COG0667	Aldo Keto reductase
C1P82_RS02940	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
C1P82_RS02945	COG0437	4 iron, 4 sulfur cluster binding
C1P82_RS02950	COG5557	Pfam Polysulphide reductase, NrfD
C1P82_RS02955	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
C1P82_RS02960	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
C1P82_RS02965	COG1773	rubredoxin
C1P82_RS02975	COG0298	carbon dioxide binding
C1P82_RS02980	COG0625	glutathione transferase activity
C1P82_RS02985	COG0754	glutathionylspermidine amidase activity
C1P82_RS02990	COG0306	phosphate transporter
C1P82_RS02995	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
C1P82_RS03000	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
C1P82_RS03005	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
C1P82_RS03010	COG2244	polysaccharide biosynthetic process
C1P82_RS03020	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
C1P82_RS03025	COG0795	lipopolysaccharide-transporting ATPase activity
C1P82_RS03035	COG0156	8-amino-7-oxononanoate synthase activity
C1P82_RS03040	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
C1P82_RS03050	COG0318	PFAM AMP-dependent synthetase and ligase
C1P82_RS03075	COG0277	FAD linked oxidase domain protein
C1P82_RS03085	COG3193	protein, possibly involved in utilization of glycolate and propanediol
C1P82_RS03095	COG1620	l-lactate permease
C1P82_RS03120	COG1811	Na channel or pump
C1P82_RS03125	COG1982	Orn Lys Arg decarboxylase major
C1P82_RS03130	COG2211	Major facilitator Superfamily
C1P82_RS03145	COG1194	a g-specific adenine glycosylase
C1P82_RS03155	COG3171	Protein conserved in bacteria
C1P82_RS03165	COG0252	asparaginase activity
C1P82_RS03180	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
C1P82_RS03190	COG0635	Involved in the biosynthesis of porphyrin-containing compound
C1P82_RS03205	COG0762	integral membrane protein
C1P82_RS03210	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
C1P82_RS03215	COG2805	Type II/IV secretion system protein
C1P82_RS03235	COG1385	rRNA (uridine-N3-)-methyltransferase activity
C1P82_RS03240	COG2356	endonuclease I
C1P82_RS03250	COG2814	Major facilitator Superfamily
C1P82_RS03295	COG0501	Belongs to the peptidase M48B family
C1P82_RS03300	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
C1P82_RS03305	COG0330	HflC and HflK could
C1P82_RS03315	COG1063	alcohol dehydrogenase
C1P82_RS03320	COG1494	fructose-1,6-bisphosphatase
C1P82_RS03330	COG1072	(Pantothenic acid kinase))
C1P82_RS03335	COG1122	ATPase activity
C1P82_RS03340	COG1122	ATPase activity
C1P82_RS03375	COG0191	fructose-bisphosphate aldolase activity
C1P82_RS03380	COG0668	transmembrane transport
C1P82_RS03390	COG2968	Membrane
C1P82_RS03395	COG0583	DNA-binding transcription factor activity
C1P82_RS03400	COG0583	DNA-binding transcription factor activity
C1P82_RS03405	COG0427	acetyl-CoA hydrolase
C1P82_RS03410	COG1024	Enoyl-CoA hydratase
C1P82_RS03415	COG1703	isobutyryl-CoA mutase activity
C1P82_RS03420	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
C1P82_RS03420	COG1884	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
C1P82_RS03435	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
C1P82_RS03450	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
C1P82_RS03470	COG0006	proline dipeptidase activity
C1P82_RS03475	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1P82_RS03480	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1P82_RS03520	COG1272	protein, Hemolysin III
C1P82_RS03540	COG0716	FMN binding
C1P82_RS03545	COG4974	Belongs to the 'phage' integrase family
C1P82_RS03550	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C1P82_RS03555	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
C1P82_RS03585	COG2233	PERMEase
C1P82_RS03595	COG2080	2 iron, 2 sulfur cluster binding
C1P82_RS03600	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
C1P82_RS03605	COG1529	Aldehyde oxidase and xanthine dehydrogenase
C1P82_RS03645	COG2771	luxR family
C1P82_RS03655	COG0183	Belongs to the thiolase family
C1P82_RS03665	COG1028	Short-chain dehydrogenase reductase Sdr
C1P82_RS03670	COG2814	Major facilitator Superfamily
C1P82_RS03675	COG1794	racemase activity, acting on amino acids and derivatives
C1P82_RS03680	COG0583	DNA-binding transcription factor activity
C1P82_RS03690	COG1609	Transcriptional regulator
C1P82_RS03705	COG0667	Aldo Keto reductase
C1P82_RS03715	COG0861	Integral membrane protein TerC family
C1P82_RS03735	COG3605	phosphoenolpyruvate-protein phosphotransferase activity
C1P82_RS03755	COG4795	General secretion pathway protein
C1P82_RS03765	COG4967	type IV pilus modification protein PilV
C1P82_RS03770	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
C1P82_RS03780	COG1074	ATP-dependent DNA helicase activity
C1P82_RS03785	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
C1P82_RS03795	COG0860	N-Acetylmuramoyl-L-alanine amidase
C1P82_RS03810	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
C1P82_RS03815	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
C1P82_RS03820	COG2166	iron-sulfur cluster assembly
C1P82_RS03825	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
C1P82_RS03835	COG0583	DNA-binding transcription factor activity
C1P82_RS03840	COG2363	Small membrane protein
C1P82_RS03850	COG1349	DNA-binding transcription factor activity
C1P82_RS03870	COG0738	Major facilitator superfamily
C1P82_RS03875	COG0235	Class ii aldolase
C1P82_RS03880	COG1454	alcohol dehydrogenase
C1P82_RS03890	COG1760	l-serine dehydratase
C1P82_RS03895	COG0814	amino acid
C1P82_RS03900	COG3385	transposase activity
C1P82_RS03905	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
C1P82_RS03915	COG0077	Prephenate dehydratase
C1P82_RS03915	COG1605	Chorismate mutase
C1P82_RS03920	COG0287	Prephenate dehydrogenase
C1P82_RS03920	COG1605	Chorismate mutase
C1P82_RS03925	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
C1P82_RS03945	COG2885	chlorophyll binding
C1P82_RS03970	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
C1P82_RS03975	COG4137	Cytochrome C assembly protein
C1P82_RS03980	COG4536	flavin adenine dinucleotide binding
C1P82_RS04000	COG0497	DNA recombination
C1P82_RS04005	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1P82_RS04015	COG2867	negative regulation of translational initiation
C1P82_RS04030	COG0582	viral genome integration into host DNA
C1P82_RS04050	COG0366	Alpha amylase catalytic
C1P82_RS04060	COG0579	oxidoreductase
C1P82_RS04070	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
C1P82_RS04075	COG1113	amino acid transport
C1P82_RS04080	COG1802	Transcriptional regulator
C1P82_RS04085	COG1652	LysM domain
C1P82_RS04090	COG0401	homolog of Blt101
C1P82_RS04095	COG0640	Transcriptional regulator
C1P82_RS04100	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C1P82_RS04105	COG2916	Histone family protein nucleoid-structuring protein H-NS
C1P82_RS04120	COG4575	ribosome binding
C1P82_RS04125	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
C1P82_RS04135	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C1P82_RS04140	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C1P82_RS04145	COG4175	Glycine betaine
C1P82_RS04150	COG4176	ABC-type proline glycine betaine transport system permease component
C1P82_RS04155	COG2113	Glycine betaine
C1P82_RS04165	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
C1P82_RS04175	COG1846	Transcriptional regulator
C1P82_RS04185	COG2814	Major facilitator Superfamily
C1P82_RS04200	COG1238	metal cluster binding
C1P82_RS04205	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1P82_RS04235	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
C1P82_RS04255	COG1546	Belongs to the CinA family
C1P82_RS04260	COG2951	lytic endotransglycosylase activity
C1P82_RS04265	COG3730	PTS system glucitol sorbitol-specific
C1P82_RS04280	COG1028	Short-chain dehydrogenase reductase Sdr
C1P82_RS04285	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P82_RS04290	COG1349	DNA-binding transcription factor activity
C1P82_RS04315	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
C1P82_RS04320	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P82_RS04325	COG1609	Transcriptional regulator
C1P82_RS04330	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P82_RS04330	COG1263	PTS System
C1P82_RS04335	COG2723	6-phospho-beta-galactosidase activity
C1P82_RS04340	COG5499	transcription regulator containing HTH domain
C1P82_RS04345	COG4680	protein conserved in bacteria
C1P82_RS04355	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
C1P82_RS04365	COG3260	NADH ubiquinone oxidoreductase 20
C1P82_RS04370	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1P82_RS04375	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
C1P82_RS04375	COG3261	NADH dehydrogenase
C1P82_RS04380	COG0650	Formate hydrogenlyase subunit 4
C1P82_RS04385	COG0651	ATP synthesis coupled electron transport
C1P82_RS04390	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P82_RS04405	COG0375	protein maturation
C1P82_RS04410	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
C1P82_RS04415	COG0298	carbon dioxide binding
C1P82_RS04420	COG0409	Hydrogenase expression formation protein
C1P82_RS04425	COG0309	Hydrogenase expression formation protein (HypE)
C1P82_RS04430	COG3604	Transcriptional regulator
C1P82_RS04455	COG1349	DNA-binding transcription factor activity
C1P82_RS04460	COG2084	Dehydrogenase
C1P82_RS04490	COG3423	Transcriptional regulator
C1P82_RS04515	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
C1P82_RS04520	COG1388	LysM domain
C1P82_RS04520	COG4942	peptidase
C1P82_RS04575	COG2234	aminopeptidase activity
C1P82_RS04610	COG0720	synthase
C1P82_RS04615	COG0644	oxidoreductase
C1P82_RS04620	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
C1P82_RS04650	COG5301	cellulose 1,4-beta-cellobiosidase activity
C1P82_RS04805	COG3772	lysozyme
C1P82_RS04855	COG0305	Participates in initiation and elongation during chromosome replication
C1P82_RS04860	COG1484	DNA-dependent DNA replication
C1P82_RS04920	COG0582	viral genome integration into host DNA
C1P82_RS04930	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
C1P82_RS04935	COG2086	electron transfer activity
C1P82_RS04940	COG0477	Major facilitator Superfamily
C1P82_RS04945	COG0277	FAD linked oxidase domain protein
C1P82_RS04955	COG0602	queuosine metabolic process
C1P82_RS04965	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
C1P82_RS04980	COG3956	TIGRFAM MazG family protein
C1P82_RS04985	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C1P82_RS05000	COG4948	Mandelate Racemase Muconate Lactonizing
C1P82_RS05005	COG4948	Mandelate Racemase Muconate Lactonizing
C1P82_RS05010	COG4948	Mandelate Racemase Muconate Lactonizing
C1P82_RS05015	COG2271	Major facilitator Superfamily
C1P82_RS05020	COG0716	FMN binding
C1P82_RS05025	COG0564	pseudouridine synthase activity
C1P82_RS05030	COG3098	single-species biofilm formation
C1P82_RS05045	COG1611	Belongs to the LOG family
C1P82_RS05050	COG3385	transposase activity
C1P82_RS05055	COG0542	response to heat
C1P82_RS05065	COG0564	pseudouridine synthase activity
C1P82_RS05070	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1P82_RS05075	COG3385	transposase activity
C1P82_RS05100	COG0477	Major facilitator Superfamily
C1P82_RS05105	COG5544	Lipoprotein
C1P82_RS05110	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
C1P82_RS05115	COG1042	CoA-binding domain protein
C1P82_RS05115	COG0045	succinate-CoA ligase (ADP-forming) activity
C1P82_RS05115	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1P82_RS05120	COG3148	PFAM DTW domain containing protein
C1P82_RS05125	COG3118	belongs to the thioredoxin family
C1P82_RS05130	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C1P82_RS05150	COG0583	DNA-binding transcription factor activity
C1P82_RS05155	COG0513	Belongs to the DEAD box helicase family
C1P82_RS05175	COG1595	DNA-templated transcription, initiation
C1P82_RS05180	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
C1P82_RS05185	COG3026	antisigma factor binding
C1P82_RS05190	COG3086	response to oxidative stress
C1P82_RS05200	COG0681	Belongs to the peptidase S26 family
C1P82_RS05235	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P82_RS05280	COG5301	cellulose 1,4-beta-cellobiosidase activity
C1P82_RS05315	COG1737	Transcriptional regulator
C1P82_RS05320	COG0560	Phosphoserine phosphatase
C1P82_RS05350	COG2205	protein histidine kinase activity
C1P82_RS05355	COG3170	Tfp pilus assembly protein FimV
C1P82_RS05360	COG2204	response regulator
C1P82_RS05365	COG0347	Belongs to the P(II) protein family
C1P82_RS05380	COG1940	carbohydrate kinase activity
C1P82_RS05390	COG1879	ABC-type sugar transport system periplasmic component
C1P82_RS05395	COG1129	ABC transporter
C1P82_RS05400	COG1172	Belongs to the binding-protein-dependent transport system permease family
C1P82_RS05405	COG1063	alcohol dehydrogenase
C1P82_RS05410	COG2017	converts alpha-aldose to the beta-anomer
C1P82_RS05415	COG2259	Doxx family
C1P82_RS05445	COG0583	DNA-binding transcription factor activity
C1P82_RS05450	COG2814	Major facilitator Superfamily
C1P82_RS05455	COG3711	transcriptional antiterminator
C1P82_RS05460	COG1073	alpha beta
C1P82_RS05465	COG0483	inositol monophosphate 1-phosphatase activity
C1P82_RS05485	COG0822	iron-sulfur transferase activity
C1P82_RS05505	COG0633	Ferredoxin
C1P82_RS05510	COG2975	iron-sulfur cluster assembly
C1P82_RS05530	COG3547	Transposase (IS116 IS110 IS902 family)
C1P82_RS05535	COG4953	penicillin-binding protein 1C
C1P82_RS05565	COG2976	Protein conserved in bacteria
C1P82_RS05580	COG1645	bacterial-type flagellum-dependent swarming motility
C1P82_RS05590	COG0516	GMP reductase activity
C1P82_RS05590	COG0517	IMP dehydrogenase activity
C1P82_RS05605	COG3133	Outer membrane lipoprotein
C1P82_RS05630	COG0248	Ppx GppA phosphatase
C1P82_RS05635	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
C1P82_RS05640	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
C1P82_RS05655	COG2233	PERMEase
C1P82_RS05665	COG1393	Belongs to the ArsC family
C1P82_RS05670	COG4783	chaperone-mediated protein folding
C1P82_RS05675	COG0628	permease
C1P82_RS05685	COG3604	Transcriptional regulator
C1P82_RS05695	COG3260	NADH ubiquinone oxidoreductase 20
C1P82_RS05700	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1P82_RS05710	COG0651	ATP synthesis coupled electron transport
C1P82_RS05715	COG4237	Hydrogenase 4 membrane
C1P82_RS05720	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C1P82_RS05725	COG0650	Formate hydrogenlyase subunit 4
C1P82_RS05735	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P82_RS05740	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
C1P82_RS05745	COG2716	regulation of RNA biosynthetic process
C1P82_RS05755	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
C1P82_RS05765	COG2321	neutral zinc metallopeptidase
C1P82_RS05775	COG0400	carboxylic ester hydrolase activity
C1P82_RS05790	COG1393	Belongs to the ArsC family
C1P82_RS05805	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C1P82_RS05815	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P82_RS05815	COG0493	'glutamate synthase
C1P82_RS05825	COG5342	invasion associated locus B
C1P82_RS05830	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
C1P82_RS05840	COG0281	malic enzyme
C1P82_RS05840	COG0280	phosphate acetyltransferase
C1P82_RS05845	COG4810	utilization protein
C1P82_RS05850	COG4917	ethanolamine utilization protein
C1P82_RS05855	COG4819	ethanolamine utilization protein
C1P82_RS05875	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
C1P82_RS05885	COG0076	glutamate decarboxylase activity
C1P82_RS05890	COG0076	glutamate decarboxylase activity
C1P82_RS05935	COG4816	utilization protein
C1P82_RS05940	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
C1P82_RS05945	COG2207	Transcriptional regulator
C1P82_RS05955	COG0860	N-Acetylmuramoyl-L-alanine amidase
C1P82_RS05975	COG2837	iron assimilation
C1P82_RS05980	COG1263	PTS System
C1P82_RS05980	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P82_RS05995	COG1028	Short-chain dehydrogenase reductase Sdr
C1P82_RS06000	COG4150	thiosulfate binding
C1P82_RS06005	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
C1P82_RS06010	COG4208	sulfate ABC transporter
C1P82_RS06020	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
C1P82_RS06040	COG2190	(PTS) system
C1P82_RS06045	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C1P82_RS06050	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P82_RS06055	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
C1P82_RS06075	COG3530	Putative quorum-sensing-regulated virulence factor
C1P82_RS06080	COG0385	Bile acid
C1P82_RS06085	COG0583	DNA-binding transcription factor activity
C1P82_RS06120	COG3415	Transposase
C1P82_RS06125	COG3415	Transposase
C1P82_RS06135	COG2199	diguanylate cyclase activity
C1P82_RS06135	COG2200	EAL domain
C1P82_RS06140	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
C1P82_RS06170	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P82_RS06180	COG1363	Peptidase, m42
C1P82_RS06190	COG2207	Transcriptional regulator
C1P82_RS06195	COG3279	Response regulator of the LytR AlgR family
C1P82_RS06205	COG0436	Aminotransferase
C1P82_RS06215	COG1560	Kdo2-lipid A biosynthetic process
C1P82_RS06240	COG0028	Belongs to the TPP enzyme family
C1P82_RS06245	COG0679	Auxin Efflux Carrier
C1P82_RS06250	COG1804	L-carnitine dehydratase bile acid-inducible protein F
C1P82_RS06255	COG2198	Histidine kinase
C1P82_RS06255	COG2205	protein histidine kinase activity
C1P82_RS06255	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P82_RS06255	COG0784	Response regulator, receiver
C1P82_RS06260	COG2197	response regulator
C1P82_RS06265	COG1566	PFAM secretion protein HlyD family protein
C1P82_RS06270	COG0477	Major facilitator Superfamily
C1P82_RS06295	COG3385	transposase activity
C1P82_RS06315	COG0582	viral genome integration into host DNA
C1P82_RS06325	COG2116	formate transmembrane transporter activity
C1P82_RS06330	COG2853	Lipoprotein
C1P82_RS06345	COG3691	Protein conserved in bacteria
C1P82_RS06360	COG2062	phosphohistidine phosphatase, SixA
C1P82_RS06365	COG3539	Fimbrial protein
C1P82_RS06375	COG3121	Chaperone
C1P82_RS06380	COG3539	Fimbrial protein
C1P82_RS06390	COG3539	Fimbrial protein
C1P82_RS06395	COG3539	Fimbrial protein
C1P82_RS06425	COG0730	response to heat
C1P82_RS06430	COG3101	peptidyl-lysine hydroxylation
C1P82_RS06445	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1P82_RS06465	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
C1P82_RS06475	COG0586	Pfam SNARE associated Golgi protein
C1P82_RS06485	COG0285	dihydrofolate synthase activity
C1P82_RS06490	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
C1P82_RS06495	COG1286	toxin biosynthetic process
C1P82_RS06500	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
C1P82_RS06505	COG0163	prenyltransferase activity
C1P82_RS06525	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P82_RS06530	COG4215	(ABC) transporter
C1P82_RS06535	COG4160	amino acid transport
C1P82_RS06540	COG4598	ABC transporter
C1P82_RS06545	COG5464	transposase or invertase
C1P82_RS06550	COG1090	epimerase
C1P82_RS06555	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
C1P82_RS06560	COG0625	glutathione transferase activity
C1P82_RS06565	COG0625	glutathione transferase activity
C1P82_RS06570	COG0622	Phosphoesterase
C1P82_RS06580	COG1288	antiporter activity
C1P82_RS06585	COG0280	phosphate acetyltransferase
C1P82_RS06585	COG0857	belongs to the CobB CobQ family
C1P82_RS06590	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
C1P82_RS06605	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1P82_RS06610	COG0471	metal ion transport
C1P82_RS06610	COG0490	domain, Protein
C1P82_RS06620	COG0436	Aminotransferase
C1P82_RS06625	COG0583	DNA-binding transcription factor activity
C1P82_RS06645	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
C1P82_RS06650	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
C1P82_RS06670	COG0839	Belongs to the complex I subunit 6 family
C1P82_RS06680	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C1P82_RS06685	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1P82_RS06725	COG2153	protein acetylation
C1P82_RS06730	COG4575	ribosome binding
C1P82_RS06735	COG1169	isochorismate synthase
C1P82_RS06750	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
C1P82_RS06760	COG0318	PFAM AMP-dependent synthetase and ligase
C1P82_RS06830	COG5464	transposase or invertase
C1P82_RS06835	COG0247	lactate metabolic process
C1P82_RS06845	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
C1P82_RS06850	COG2271	Major facilitator Superfamily
C1P82_RS06855	COG0584	glycerophosphoryl diester phosphodiesterase
C1P82_RS06865	COG3642	lipopolysaccharide core region biosynthetic process
C1P82_RS06870	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C1P82_RS06875	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C1P82_RS06880	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C1P82_RS06895	COG3468	outer membrane autotransporter barrel domain protein
C1P82_RS06900	COG3468	outer membrane autotransporter barrel domain protein
C1P82_RS06910	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
C1P82_RS06920	COG3234	Protein of unknown function (DUF1175)
C1P82_RS06950	COG5445	Predicted secreted protein (DUF2300)
C1P82_RS06955	COG4676	Protein conserved in bacteria
C1P82_RS06960	COG0784	Response regulator, receiver
C1P82_RS06960	COG2205	protein histidine kinase activity
C1P82_RS06965	COG2197	response regulator
C1P82_RS06970	COG2198	Histidine kinase
C1P82_RS06970	COG0642	Histidine kinase
C1P82_RS06980	COG1477	protein flavinylation
C1P82_RS06985	COG2169	Transcriptional regulator
C1P82_RS06985	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
C1P82_RS06990	COG3145	DNA-N1-methyladenine dioxygenase activity
C1P82_RS06995	COG4615	Cyclic peptide transporter
C1P82_RS07015	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P82_RS07015	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P82_RS07020	COG3062	negative regulation of establishment of protein localization
C1P82_RS07030	COG0437	4 iron, 4 sulfur cluster binding
C1P82_RS07035	COG0348	domain, Protein
C1P82_RS07040	COG3043	anaerobic respiration
C1P82_RS07055	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
C1P82_RS07060	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
C1P82_RS07065	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
C1P82_RS07075	COG1138	Cytochrome C-type biogenesis protein
C1P82_RS07080	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
C1P82_RS07085	COG4235	cytochrome complex assembly
C1P82_RS07085	COG3088	subunit of a heme lyase
C1P82_RS07090	COG2197	response regulator
C1P82_RS07095	COG3468	outer membrane autotransporter barrel domain protein
C1P82_RS07105	COG3083	sulfuric ester hydrolase activity
C1P82_RS07125	COG1061	Type III restriction enzyme res subunit
C1P82_RS07130	COG1187	pseudouridine synthase activity
C1P82_RS07135	COG2814	Major facilitator Superfamily
C1P82_RS07145	COG4172	Belongs to the ABC transporter superfamily
C1P82_RS07150	COG4239	(ABC) transporter, permease
C1P82_RS07155	COG4174	ABC transporter (Permease)
C1P82_RS07160	COG4166	transmembrane transport
C1P82_RS07165	COG2200	EAL domain
C1P82_RS07170	COG0791	NLP P60 protein
C1P82_RS07175	COG0671	phosphoesterase, PA-phosphatase related
C1P82_RS07180	COG0523	cobalamin synthesis protein
C1P82_RS07185	COG0246	Mannitol dehydrogenase
C1P82_RS07205	COG2814	Major facilitator Superfamily
C1P82_RS07210	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P82_RS07210	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P82_RS07215	COG1105	Belongs to the carbohydrate kinase PfkB family
C1P82_RS07220	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
C1P82_RS07220	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P82_RS07220	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P82_RS07225	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P82_RS07230	COG2313	pseudouridylate synthase activity
C1P82_RS07235	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
C1P82_RS07240	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C1P82_RS07250	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
C1P82_RS07255	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P82_RS07255	COG1522	sequence-specific DNA binding
C1P82_RS07265	COG2855	membrane
C1P82_RS07270	COG0583	DNA-binding transcription factor activity
C1P82_RS07275	COG0833	amino acid
C1P82_RS07280	COG4771	TonB-dependent receptor
C1P82_RS07295	COG2311	Membrane
C1P82_RS07300	COG1609	Transcriptional regulator
C1P82_RS07305	COG1879	ABC-type sugar transport system periplasmic component
C1P82_RS07330	COG5301	cellulose 1,4-beta-cellobiosidase activity
C1P82_RS07350	COG0500	methyltransferase
C1P82_RS07370	COG3385	transposase activity
C1P82_RS07375	COG3275	phosphorelay sensor kinase activity
C1P82_RS07385	COG4807	Protein conserved in bacteria
C1P82_RS07390	COG4808	Protein conserved in bacteria
C1P82_RS07425	COG0489	protein tyrosine kinase activity
C1P82_RS07435	COG3539	Fimbrial protein
C1P82_RS07440	COG3121	Chaperone
C1P82_RS07445	COG3188	usher protein
C1P82_RS07455	COG5455	response to cobalt ion
C1P82_RS07475	COG0351	phosphomethylpyrimidine kinase
C1P82_RS07480	COG3757	hydrolase, family 25
C1P82_RS07485	COG2188	Transcriptional regulator
C1P82_RS07490	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P82_RS07500	COG2211	Major facilitator Superfamily
C1P82_RS07505	COG1830	Aldolase
C1P82_RS07520	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P82_RS07525	COG3414	Phosphotransferase system galactitol-specific IIB component
C1P82_RS07530	COG3775	system Galactitol-specific IIC component
C1P82_RS07535	COG1063	alcohol dehydrogenase
C1P82_RS07560	COG0826	peptidase U32
C1P82_RS07570	COG0745	RESPONSE REGULATOR receiver
C1P82_RS07575	COG2205	protein histidine kinase activity
C1P82_RS07600	COG3547	Transposase (IS116 IS110 IS902 family)
C1P82_RS07610	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
C1P82_RS07615	COG0443	Heat shock 70 kDa protein
C1P82_RS07620	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
C1P82_RS07625	COG4248	protein with protein kinase and helix-hairpin-helix DNA-binding domains
C1P82_RS07630	COG0631	protein serine/threonine phosphatase activity
C1P82_RS07635	COG4245	von Willebrand factor, type A
C1P82_RS07640	COG3547	Transposase (IS116 IS110 IS902 family)
C1P82_RS07650	COG0572	uridine kinase
C1P82_RS07660	COG2982	Protein involved in outer membrane biogenesis
C1P82_RS07665	COG1253	flavin adenine dinucleotide binding
C1P82_RS07670	COG1596	polysaccharide export
C1P82_RS07675	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
C1P82_RS07680	COG0489	protein tyrosine kinase activity
C1P82_RS07680	COG3206	protein involved in exopolysaccharide biosynthesis
C1P82_RS07685	COG0463	Glycosyl transferase, family 2
C1P82_RS07690	COG1045	serine acetyltransferase
C1P82_RS07695	COG0438	transferase activity, transferring glycosyl groups
C1P82_RS07720	COG0110	maltose O-acetyltransferase activity
C1P82_RS07725	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
C1P82_RS07730	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C1P82_RS07735	COG1051	belongs to the nudix hydrolase family
C1P82_RS07740	COG0297	glycogen (starch) synthase activity
C1P82_RS07745	COG0662	Cupin 2, conserved barrel domain protein
C1P82_RS07745	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
C1P82_RS07755	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
C1P82_RS07760	COG2244	polysaccharide biosynthetic process
C1P82_RS07770	COG0438	transferase activity, transferring glycosyl groups
C1P82_RS07780	COG1210	Utp--glucose-1-phosphate uridylyltransferase
C1P82_RS07925	COG4115	mRNA cleavage
C1P82_RS07930	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C1P82_RS07935	COG0583	DNA-binding transcription factor activity
C1P82_RS07945	COG0531	amino acid
C1P82_RS07950	COG2391	methyltransferase activity
C1P82_RS07955	COG0425	Belongs to the sulfur carrier protein TusA family
C1P82_RS07960	COG2925	Exonuclease
C1P82_RS07995	COG2087	Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate
C1P82_RS08010	COG1376	ErfK ybiS ycfS ynhG family protein
C1P82_RS08020	COG0583	DNA-binding transcription factor activity
C1P82_RS08025	COG0583	DNA-binding transcription factor activity
C1P82_RS08050	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
C1P82_RS08065	COG0477	Major facilitator Superfamily
C1P82_RS08155	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
C1P82_RS08195	COG3436	PFAM IS66 Orf2 family protein
C1P82_RS08225	COG0500	methyltransferase
C1P82_RS08240	COG3443	Belongs to the bacterial solute-binding protein 9 family
C1P82_RS08255	COG2351	hydroxyisourate hydrolase activity
C1P82_RS08260	COG0745	RESPONSE REGULATOR receiver
C1P82_RS08265	COG2205	protein histidine kinase activity
C1P82_RS08310	COG0270	DNA (cytosine-5-)-methyltransferase activity
C1P82_RS08315	COG3727	T/G mismatch-specific endonuclease activity
C1P82_RS08320	COG0697	spore germination
C1P82_RS08325	COG2354	Protein conserved in bacteria
C1P82_RS08330	COG5475	Uncharacterized small protein (DUF2158)
C1P82_RS08360	COG2197	response regulator
C1P82_RS08365	COG1684	flagellar biosynthetic protein fliR
C1P82_RS08370	COG1987	bacterial-type flagellum assembly
C1P82_RS08375	COG1338	Plays a role in the flagellum-specific transport system
C1P82_RS08380	COG3190	flagellar
C1P82_RS08385	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
C1P82_RS08390	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
C1P82_RS08395	COG1580	Controls the rotational direction of flagella during chemotaxis
C1P82_RS08400	COG3144	bacterial-type flagellum assembly
C1P82_RS08410	COG1157	protein secretion by the type III secretion system
C1P82_RS08415	COG1317	bacterial-type flagellum organization
C1P82_RS08420	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
C1P82_RS08440	COG2076	Multidrug Resistance protein
C1P82_RS08455	COG2207	Transcriptional regulator
C1P82_RS08475	COG0675	Transposase, IS605 OrfB family
C1P82_RS08480	COG0675	Transposase, IS605 OrfB family
C1P82_RS08490	COG0425	Belongs to the sulfur carrier protein TusA family
C1P82_RS08495	COG2391	methyltransferase activity
C1P82_RS08505	COG0366	Alpha amylase catalytic
C1P82_RS08515	COG1516	flagellar protein fliS
C1P82_RS08520	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
C1P82_RS08530	COG1191	sigma factor activity
C1P82_RS08540	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P82_RS08550	COG0765	amino acid transport
C1P82_RS08555	COG1126	abc transporter atp-binding protein
C1P82_RS08560	COG2197	response regulator
C1P82_RS08575	COG2197	response regulator
C1P82_RS08605	COG3012	SEC-C Motif Domain Protein
C1P82_RS08605	COG3318	Belongs to the UPF0149 family
C1P82_RS08610	COG0814	amino acid
C1P82_RS08620	COG1528	Iron-storage protein
C1P82_RS08640	COG1528	Iron-storage protein
C1P82_RS08645	COG1879	ABC-type sugar transport system periplasmic component
C1P82_RS08655	COG1172	Belongs to the binding-protein-dependent transport system permease family
C1P82_RS08660	COG1877	trehalose-phosphatase activity
C1P82_RS08670	COG0589	response to stress
C1P82_RS08685	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
C1P82_RS08690	COG1360	Flagellar Motor Protein
C1P82_RS08695	COG0643	Histidine kinase
C1P82_RS08695	COG2198	Histidine kinase
C1P82_RS08700	COG0835	chemotaxis
C1P82_RS08705	COG0840	transmembrane signaling receptor activity
C1P82_RS08710	COG0840	transmembrane signaling receptor activity
C1P82_RS08715	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
C1P82_RS08725	COG0745	RESPONSE REGULATOR receiver
C1P82_RS08730	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
C1P82_RS08760	COG0232	Belongs to the dGTPase family. Type 2 subfamily
C1P82_RS08765	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
C1P82_RS08770	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
C1P82_RS08775	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
C1P82_RS08795	COG3755	Protein conserved in bacteria
C1P82_RS08805	COG3102	Protein conserved in bacteria
C1P82_RS08815	COG3005	denitrification pathway
C1P82_RS08820	COG0243	molybdopterin cofactor binding
C1P82_RS08835	COG3788	relative of glutathione S-transferase, MAPEG superfamily
C1P82_RS08840	COG1801	Protein of unknown function DUF72
C1P82_RS08910	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
C1P82_RS08945	COG3547	Transposase (IS116 IS110 IS902 family)
C1P82_RS09015	COG5301	cellulose 1,4-beta-cellobiosidase activity
C1P82_RS09045	COG3547	Transposase (IS116 IS110 IS902 family)
C1P82_RS09050	COG1335	isochorismatase
C1P82_RS09060	COG0494	nUDIX hydrolase
C1P82_RS09065	COG0217	transcriptional regulatory protein
C1P82_RS09095	COG1108	ABC-type Mn2 Zn2 transport systems permease components
C1P82_RS09105	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
C1P82_RS09110	COG0739	heme binding
C1P82_RS09120	COG0469	pyruvate kinase activity
C1P82_RS09125	COG1737	Transcriptional regulator
C1P82_RS09130	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
C1P82_RS09135	COG0129	dihydroxy-acid dehydratase activity
C1P82_RS09140	COG0800	Aldolase
C1P82_RS09160	COG2979	Protein of unknown function (DUF533)
C1P82_RS09165	COG1770	oligopeptidase
C1P82_RS09170	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
C1P82_RS09185	COG2372	response to copper ion
C1P82_RS09200	COG0582	viral genome integration into host DNA
C1P82_RS09255	COG4166	transmembrane transport
C1P82_RS09260	COG0668	transmembrane transport
C1P82_RS09290	COG0589	response to stress
C1P82_RS09295	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C1P82_RS09300	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
C1P82_RS09310	COG2207	Transcriptional regulator
C1P82_RS09340	COG2840	Smr protein MutS2
C1P82_RS09355	COG0513	Belongs to the DEAD box helicase family
C1P82_RS09365	COG0589	response to stress
C1P82_RS09385	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
C1P82_RS09385	COG0674	pyruvate-flavodoxin oxidoreductase activity
C1P82_RS09385	COG1013	pyruvate-flavodoxin oxidoreductase activity
C1P82_RS09385	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
C1P82_RS09390	COG3042	response to heat
C1P82_RS09405	COG3784	Protein of unknown function (DUF1318)
C1P82_RS09415	COG2911	Protein conserved in bacteria
C1P82_RS09420	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
C1P82_RS09440	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
C1P82_RS09445	COG4589	Belongs to the CDS family
C1P82_RS09450	COG2267	carboxylic ester hydrolase activity
C1P82_RS09475	COG1643	Atp-dependent helicase
C1P82_RS09500	COG1012	belongs to the aldehyde dehydrogenase family
C1P82_RS09510	COG3038	cytochrome b561
C1P82_RS09550	COG0840	transmembrane signaling receptor activity
C1P82_RS09555	COG0583	DNA-binding transcription factor activity
C1P82_RS09560	COG5383	Protein conserved in bacteria
C1P82_RS09570	COG2841	Protein conserved in bacteria
C1P82_RS09575	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1P82_RS09580	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
C1P82_RS09585	COG1275	C4-dicarboxylate transporter malic acid transport protein
C1P82_RS09590	COG0500	methyltransferase
C1P82_RS09620	COG1140	nitrate reductase beta subunit
C1P82_RS09625	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
C1P82_RS09630	COG2223	nitrite transmembrane transporter activity
C1P82_RS09645	COG4886	Leucine-rich repeat (LRR) protein
C1P82_RS09660	COG0697	spore germination
C1P82_RS09665	COG0243	molybdopterin cofactor binding
C1P82_RS09665	COG3383	formate dehydrogenase (NAD+) activity
C1P82_RS09670	COG3383	formate dehydrogenase (NAD+) activity
C1P82_RS09670	COG0243	molybdopterin cofactor binding
C1P82_RS09675	COG0437	4 iron, 4 sulfur cluster binding
C1P82_RS09680	COG2864	formate dehydrogenase
C1P82_RS09685	COG3093	addiction module antidote protein HigA
C1P82_RS09705	COG1764	response to oxidative stress
C1P82_RS09715	COG0444	Belongs to the ABC transporter superfamily
C1P82_RS09720	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1P82_RS09740	COG1649	PFAM Uncharacterised BCR, COG1649
C1P82_RS09745	COG0531	amino acid
C1P82_RS09750	COG0076	glutamate decarboxylase activity
C1P82_RS09775	COG4771	TonB-dependent receptor
C1P82_RS09790	COG0641	radical SAM
C1P82_RS09795	COG3119	arylsulfatase activity
C1P82_RS09815	COG2271	Major facilitator Superfamily
C1P82_RS09820	COG0738	Major facilitator superfamily
C1P82_RS09835	COG0628	permease
C1P82_RS09840	COG0247	lactate metabolic process
C1P82_RS09840	COG0277	FAD linked oxidase domain protein
C1P82_RS09845	COG2050	protein possibly involved in aromatic compounds catabolism
C1P82_RS09855	COG0316	Belongs to the HesB IscA family
C1P82_RS09860	COG0719	Fe-S assembly protein
C1P82_RS09865	COG0396	ATPase activity
C1P82_RS09870	COG0719	Fe-S assembly protein
C1P82_RS09885	COG1376	ErfK ybiS ycfS ynhG family protein
C1P82_RS09890	COG4238	major outer membrane lipoprotein
C1P82_RS09895	COG0469	pyruvate kinase activity
C1P82_RS09910	COG0437	4 iron, 4 sulfur cluster binding
C1P82_RS09925	COG0437	4 iron, 4 sulfur cluster binding
C1P82_RS09930	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
C1P82_RS09940	COG4529	Protein conserved in bacteria
C1P82_RS09960	COG3468	outer membrane autotransporter barrel domain protein
C1P82_RS09970	COG0307	riboflavin synthase, alpha
C1P82_RS09975	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
C1P82_RS09980	COG2814	Major facilitator Superfamily
C1P82_RS09985	COG0583	DNA-binding transcription factor activity
C1P82_RS10000	COG2814	Major facilitator Superfamily
C1P82_RS10005	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
C1P82_RS10010	COG0791	NLP P60 protein
C1P82_RS10015	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
C1P82_RS10040	COG0346	lactoylglutathione lyase activity
C1P82_RS10045	COG1902	pentaerythritol trinitrate reductase activity
C1P82_RS10050	COG1309	transcriptional regulator
C1P82_RS10055	COG3313	Fe-S protein
C1P82_RS10060	COG4989	oxidoreductase activity
C1P82_RS10065	COG2032	superoxide dismutase activity
C1P82_RS10075	COG1566	PFAM secretion protein HlyD family protein
C1P82_RS10090	COG3133	Outer membrane lipoprotein
C1P82_RS10130	COG0625	glutathione transferase activity
C1P82_RS10135	COG3104	oligopeptide transport
C1P82_RS10145	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
C1P82_RS10155	COG4659	FMN binding
C1P82_RS10195	COG0673	inositol 2-dehydrogenase activity
C1P82_RS10205	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
C1P82_RS10210	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P82_RS10210	COG1263	PTS System
C1P82_RS10215	COG1609	Transcriptional regulator
C1P82_RS10220	COG1028	Short-chain dehydrogenase reductase Sdr
C1P82_RS10235	COG1309	transcriptional regulator
C1P82_RS10240	COG3250	beta-galactosidase activity
C1P82_RS10255	COG5339	Protein conserved in bacteria
C1P82_RS10265	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
C1P82_RS10265	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
C1P82_RS10280	COG2205	protein histidine kinase activity
C1P82_RS10285	COG1823	symporter activity
C1P82_RS10290	COG0745	RESPONSE REGULATOR receiver
C1P82_RS10295	COG3136	membrane protein required for alginate biosynthesis
C1P82_RS10305	COG0531	amino acid
C1P82_RS10315	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
C1P82_RS10320	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
C1P82_RS10325	COG0628	permease
C1P82_RS10345	COG3591	Belongs to the peptidase S1B family
C1P82_RS10365	COG0583	DNA-binding transcription factor activity
C1P82_RS10370	COG1940	carbohydrate kinase activity
C1P82_RS10375	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
C1P82_RS10390	COG3302	dmso reductase anchor subunit
C1P82_RS10395	COG0437	4 iron, 4 sulfur cluster binding
C1P82_RS10405	COG0243	molybdopterin cofactor binding
C1P82_RS10440	COG3077	Addiction module antitoxin, RelB DinJ family
C1P82_RS10445	COG2026	Addiction module toxin, RelE StbE family
C1P82_RS10470	COG4570	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC
C1P82_RS10475	COG0484	heat shock protein binding
C1P82_RS10480	COG0484	heat shock protein binding
C1P82_RS10530	COG0246	Mannitol dehydrogenase
C1P82_RS10540	COG1802	Transcriptional regulator
C1P82_RS10550	COG0339	signal peptide processing
C1P82_RS10555	COG1546	Belongs to the CinA family
C1P82_RS10575	COG2814	Major facilitator Superfamily
C1P82_RS10580	COG0697	spore germination
C1P82_RS10590	COG4977	sequence-specific DNA binding
C1P82_RS10595	COG1846	Transcriptional regulator
C1P82_RS10615	COG1012	belongs to the aldehyde dehydrogenase family
C1P82_RS10620	COG2066	Belongs to the glutaminase family
C1P82_RS10630	COG2199	diguanylate cyclase activity
C1P82_RS10650	COG3781	membrane
C1P82_RS10715	COG4948	Mandelate Racemase Muconate Lactonizing
C1P82_RS10745	COG0243	molybdopterin cofactor binding
C1P82_RS10750	COG0243	molybdopterin cofactor binding
C1P82_RS10765	COG3539	Fimbrial protein
C1P82_RS10785	COG3119	arylsulfatase activity
C1P82_RS10795	COG1917	Cupin 2, conserved barrel domain protein
C1P82_RS10795	COG2207	Transcriptional regulator
C1P82_RS10800	COG2086	electron transfer activity
C1P82_RS10805	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
C1P82_RS10810	COG0644	oxidoreductase
C1P82_RS10815	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
C1P82_RS10820	COG0318	PFAM AMP-dependent synthetase and ligase
C1P82_RS10825	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C1P82_RS10825	COG0574	Belongs to the PEP-utilizing enzyme family
C1P82_RS10840	COG4256	Hemin uptake protein
C1P82_RS10850	COG2200	EAL domain
C1P82_RS10855	COG3385	transposase activity
C1P82_RS10860	COG0791	NLP P60 protein
C1P82_RS10870	COG0386	Belongs to the glutathione peroxidase family
C1P82_RS10940	COG3137	Salt-induced outer membrane protein
C1P82_RS10945	COG1105	Belongs to the carbohydrate kinase PfkB family
C1P82_RS10955	COG3001	Fructosamine kinase
C1P82_RS10965	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1P82_RS10970	COG1988	membrane-bound metal-dependent
C1P82_RS10990	COG0753	catalase activity
C1P82_RS11000	COG1486	melibiose metabolic process
C1P82_RS11010	COG1447	Phosphotransferase system cellobiose-specific component IIA
C1P82_RS11015	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
C1P82_RS11020	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
C1P82_RS11030	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1P82_RS11050	COG3678	ATP-independent chaperone mediated protein folding
C1P82_RS11080	COG0708	Exodeoxyribonuclease III
C1P82_RS11085	COG0398	Pfam SNARE associated Golgi protein
C1P82_RS11095	COG0398	Pfam SNARE associated Golgi protein
C1P82_RS11100	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1P82_RS11105	COG4134	Bacterial extracellular solute-binding protein
C1P82_RS11110	COG3385	transposase activity
C1P82_RS11125	COG4136	ATPase activity
C1P82_RS11130	COG2897	thiosulfate sulfurtransferase activity
C1P82_RS11135	COG2897	thiosulfate sulfurtransferase activity
C1P82_RS11140	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
C1P82_RS11145	COG0494	nUDIX hydrolase
C1P82_RS11155	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
C1P82_RS11175	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
C1P82_RS11185	COG0778	Nitroreductase
C1P82_RS11190	COG0616	signal peptide processing
C1P82_RS11195	COG0252	asparaginase activity
C1P82_RS11200	COG1335	isochorismatase
C1P82_RS11220	COG1349	DNA-binding transcription factor activity
C1P82_RS11225	COG0667	Aldo Keto reductase
C1P82_RS11230	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P82_RS11235	COG0191	fructose-bisphosphate aldolase activity
C1P82_RS11250	COG1063	alcohol dehydrogenase
C1P82_RS11255	COG3139	Protein of unknown function (DUF1315)
C1P82_RS11265	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
C1P82_RS11270	COG0676	glucose-6-phosphate 1-epimerase activity
C1P82_RS11275	COG0656	L-ascorbic acid biosynthetic process
C1P82_RS11280	COG3713	MltA-interacting MipA family protein
C1P82_RS11300	COG4638	Rieske (2fe-2S)
C1P82_RS11305	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C1P82_RS11310	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
C1P82_RS11315	COG0318	PFAM AMP-dependent synthetase and ligase
C1P82_RS11320	COG3065	identical protein binding
C1P82_RS11325	COG1214	PFAM Peptidase M22, glycoprotease
C1P82_RS11330	COG1199	ATP-dependent helicase activity
C1P82_RS11335	COG0251	oxidation-reduction process
C1P82_RS11350	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
C1P82_RS11360	COG1760	l-serine dehydratase
C1P82_RS11365	COG2200	EAL domain
C1P82_RS11370	COG1253	flavin adenine dinucleotide binding
C1P82_RS11375	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P82_RS11375	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P82_RS11380	COG3715	PTS system
C1P82_RS11385	COG3716	PTS system mannose fructose sorbose family IID component
C1P82_RS11405	COG2226	methyltransferase
C1P82_RS11435	COG1414	Transcriptional regulator
C1P82_RS11440	COG2814	Major facilitator Superfamily
C1P82_RS11450	COG0793	Belongs to the peptidase S41A family
C1P82_RS11460	COG1956	GAF domain-containing protein
C1P82_RS11540	COG3436	PFAM IS66 Orf2 family protein
C1P82_RS11555	COG0366	Alpha amylase catalytic
C1P82_RS11560	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C1P82_RS11570	COG1983	PspC domain protein
C1P82_RS11580	COG1842	Phage shock protein A
C1P82_RS11585	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
C1P82_RS11590	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
C1P82_RS11595	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
C1P82_RS11600	COG1012	belongs to the aldehyde dehydrogenase family
C1P82_RS11605	COG1396	sequence-specific DNA binding
C1P82_RS11605	COG1917	Cupin 2, conserved barrel domain protein
C1P82_RS11625	COG0531	amino acid
C1P82_RS11635	COG4166	transmembrane transport
C1P82_RS11640	COG4168	peptide transport system, permease
C1P82_RS11645	COG4171	peptide transport system, permease
C1P82_RS11650	COG4172	Belongs to the ABC transporter superfamily
C1P82_RS11655	COG4172	Belongs to the ABC transporter superfamily
C1P82_RS11660	COG2852	Protein conserved in bacteria
C1P82_RS11665	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
C1P82_RS11670	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1P82_RS11670	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C1P82_RS11695	COG1349	DNA-binding transcription factor activity
C1P82_RS11705	COG0023	Translation Initiation Factor
C1P82_RS11715	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
C1P82_RS11720	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
C1P82_RS11725	COG0671	phosphoesterase, PA-phosphatase related
C1P82_RS11735	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
C1P82_RS11760	COG0583	DNA-binding transcription factor activity
C1P82_RS11765	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
C1P82_RS11775	COG0616	signal peptide processing
C1P82_RS11780	COG1028	Short-chain dehydrogenase reductase Sdr
C1P82_RS11785	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
C1P82_RS11795	COG0009	L-threonylcarbamoyladenylate synthase
C1P82_RS11800	COG0613	PHP domain protein
C1P82_RS11810	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
C1P82_RS11815	COG0512	Glutamine amidotransferase of anthranilate synthase
C1P82_RS11815	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C1P82_RS11820	COG0135	phosphoribosylanthranilate isomerase activity
C1P82_RS11820	COG0134	indole-3-glycerol-phosphate synthase activity
C1P82_RS11835	COG3729	General stress protein
C1P82_RS11840	COG3685	Protein conserved in bacteria
C1P82_RS11845	COG3685	Protein conserved in bacteria
C1P82_RS11850	COG3047	cAMP biosynthetic process
C1P82_RS11870	COG1607	acyl-coa hydrolase
C1P82_RS11880	COG2350	Protein conserved in bacteria
C1P82_RS11890	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C1P82_RS11910	COG4608	Belongs to the ABC transporter superfamily
C1P82_RS11915	COG0444	Belongs to the ABC transporter superfamily
C1P82_RS11920	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C1P82_RS11925	COG0601	transmembrane transport
C1P82_RS11930	COG4166	transmembrane transport
C1P82_RS11935	COG2095	MarC family integral membrane protein
C1P82_RS11940	COG1454	alcohol dehydrogenase
C1P82_RS11940	COG1012	belongs to the aldehyde dehydrogenase family
C1P82_RS11950	COG1435	thymidine kinase activity
C1P82_RS11960	COG1210	Utp--glucose-1-phosphate uridylyltransferase
C1P82_RS11965	COG0745	RESPONSE REGULATOR receiver
C1P82_RS11970	COG1752	Esterase of the alpha-beta hydrolase superfamily
C1P82_RS11980	COG0788	formyltetrahydrofolate deformylase activity
C1P82_RS11995	COG2181	nitrate reductase activity
C1P82_RS12000	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
C1P82_RS12005	COG1140	nitrate reductase beta subunit
C1P82_RS12010	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
C1P82_RS12015	COG2223	nitrite transmembrane transporter activity
C1P82_RS12020	COG3850	Histidine kinase
C1P82_RS12025	COG2197	response regulator
C1P82_RS12030	COG4932	domain protein
C1P82_RS12035	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
C1P82_RS12040	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
C1P82_RS12045	COG4572	Cation transport regulator
C1P82_RS12050	COG0387	Pfam Sodium calcium exchanger
C1P82_RS12075	COG2912	Transglutaminase-like superfamily
C1P82_RS12080	COG3094	Invasion gene expression up-regulator, SirB
C1P82_RS12085	COG2890	protein-(glutamine-N5) methyltransferase activity
C1P82_RS12110	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
C1P82_RS12115	COG0659	secondary active sulfate transmembrane transporter activity
C1P82_RS12130	COG0012	GTP binding
C1P82_RS12135	COG3468	outer membrane autotransporter barrel domain protein
C1P82_RS12140	COG3284	Transcriptional regulator
C1P82_RS12145	COG2376	Dihydroxyacetone kinase
C1P82_RS12150	COG1461	Dihydroxyacetone kinase
C1P82_RS12155	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
C1P82_RS12155	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
C1P82_RS12155	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P82_RS12170	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
C1P82_RS12175	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1P82_RS12180	COG1120	ATPase activity
C1P82_RS12185	COG0500	methyltransferase
C1P82_RS12190	COG0157	Belongs to the NadC ModD family
C1P82_RS12210	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
C1P82_RS12220	COG1619	proteins homologs of microcin C7 resistance protein MccF
C1P82_RS12240	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
C1P82_RS12250	COG2719	SpoVR family
C1P82_RS12270	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
C1P82_RS12275	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
C1P82_RS12290	COG0179	Fumarylacetoacetate (FAA) hydrolase
C1P82_RS12335	COG2894	cell division
C1P82_RS12385	COG0538	isocitrate dehydrogenase activity
C1P82_RS12410	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
C1P82_RS12430	COG4626	Terminase
C1P82_RS12430	COG1802	Transcriptional regulator
C1P82_RS12550	COG2850	peptidyl-arginine hydroxylation
C1P82_RS12560	COG3842	ATPase activity
C1P82_RS12570	COG1177	transmembrane transport
C1P82_RS12575	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
C1P82_RS12590	COG4591	ABC-type transport system involved in lipoprotein release permease component
C1P82_RS12600	COG4591	ABC-type transport system involved in lipoprotein release permease component
C1P82_RS12605	COG4763	Acyl-transferase
C1P82_RS12610	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
C1P82_RS12615	COG1388	LysM domain
C1P82_RS12615	COG1376	ErfK ybiS ycfS ynhG family protein
C1P82_RS12625	COG1309	transcriptional regulator
C1P82_RS12630	COG3134	Outer membrane lipoprotein
C1P82_RS12635	COG1252	NADH dehydrogenase
C1P82_RS12655	COG3417	Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b)
C1P82_RS12660	COG5633	Lipoprotein
C1P82_RS12665	COG0537	adenosine 5'-monophosphoramidase activity
C1P82_RS12670	COG4773	Receptor
C1P82_RS12675	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P82_RS12675	COG1263	PTS System
C1P82_RS12680	COG0084	hydrolase, TatD family'
C1P82_RS12685	COG0470	DNA polymerase III
C1P82_RS12695	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
C1P82_RS12700	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
C1P82_RS12705	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
C1P82_RS12715	COG1028	Short-chain dehydrogenase reductase Sdr
C1P82_RS12720	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
C1P82_RS12740	COG1399	metal-binding, possibly nucleic acid-binding protein
C1P82_RS12745	COG0424	maF-like protein
C1P82_RS12750	COG0564	pseudouridine synthase activity
C1P82_RS12760	COG1530	ribonuclease E activity
C1P82_RS12765	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
C1P82_RS12775	COG3951	Flagellar rod assembly protein muramidase FlgJ
C1P82_RS12775	COG1705	Flagellar rod assembly protein muramidase FlgJ
C1P82_RS12790	COG4786	Flagellar basal body rod
C1P82_RS12800	COG1749	Flagellar hook protein flgE
C1P82_RS12805	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
C1P82_RS12815	COG1815	bacterial-type flagellum-dependent cell motility
C1P82_RS12820	COG1261	Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly
C1P82_RS12825	COG2747	anti-sigma28 factor FlgM
C1P82_RS12830	COG3418	PFAM FlgN family protein
C1P82_RS12835	COG0728	peptidoglycan biosynthetic process
C1P82_RS12840	COG0673	inositol 2-dehydrogenase activity
C1P82_RS12850	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C1P82_RS12860	COG2999	glutathione oxidoreductase activity
C1P82_RS12895	COG3038	cytochrome b561
C1P82_RS12910	COG1560	Kdo2-lipid A biosynthetic process
C1P82_RS12920	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
C1P82_RS12990	COG2943	transferase activity, transferring hexosyl groups
C1P82_RS13045	COG2197	response regulator
C1P82_RS13070	COG3381	protein complex oligomerization
C1P82_RS13125	COG3706	GGDEF domain
C1P82_RS13140	COG1215	transferase activity, transferring glycosyl groups
C1P82_RS13145	COG3658	cytochrome
C1P82_RS13150	COG1702	phosphate starvation-inducible protein PhoH
C1P82_RS13160	COG2822	iron ion transport
C1P82_RS13180	COG1309	transcriptional regulator
C1P82_RS13220	COG2233	PERMEase
C1P82_RS13225	COG3729	General stress protein
C1P82_RS13275	COG0243	molybdopterin cofactor binding
C1P82_RS13280	COG3005	denitrification pathway
C1P82_RS13285	COG0745	RESPONSE REGULATOR receiver
C1P82_RS13290	COG1879	ABC-type sugar transport system periplasmic component
C1P82_RS13295	COG2198	Histidine kinase
C1P82_RS13295	COG2205	protein histidine kinase activity
C1P82_RS13295	COG0784	Response regulator, receiver
C1P82_RS13300	COG0348	domain, Protein
C1P82_RS13320	COG1278	Cold shock
C1P82_RS13330	COG1278	Cold shock
C1P82_RS13350	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1P82_RS13355	COG1596	polysaccharide export
C1P82_RS13360	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
C1P82_RS13365	COG0489	protein tyrosine kinase activity
C1P82_RS13365	COG3206	protein involved in exopolysaccharide biosynthesis
C1P82_RS13380	COG1294	oxidase, subunit
C1P82_RS13385	COG1271	oxidase subunit
C1P82_RS13390	COG1773	rubredoxin
C1P82_RS13395	COG1999	signal sequence binding
C1P82_RS13400	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
C1P82_RS13405	COG1969	Ni Fe-hydrogenase, b-type cytochrome subunit
C1P82_RS13410	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
C1P82_RS13415	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
C1P82_RS13425	COG0670	Belongs to the BI1 family
C1P82_RS13430	COG2920	part of a sulfur-relay system
C1P82_RS13435	COG1254	Belongs to the acylphosphatase family
C1P82_RS13450	COG1832	CoA-binding protein
C1P82_RS13465	COG0210	DNA helicase
C1P82_RS13470	COG3304	Inner membrane component domain
C1P82_RS13475	COG1289	transmembrane transporter activity
C1P82_RS13480	COG3070	regulator of competence-specific genes
C1P82_RS13490	COG3070	regulator of competence-specific genes
C1P82_RS13510	COG1067	ATP-dependent peptidase activity
C1P82_RS13520	COG3130	regulation of translation
C1P82_RS13525	COG3009	Protein conserved in bacteria
C1P82_RS13530	COG3008	intermembrane lipid transfer
C1P82_RS13530	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
C1P82_RS13535	COG2995	paraquat-inducible protein a
C1P82_RS13540	COG0488	(ABC) transporter
C1P82_RS13550	COG0633	Ferredoxin
C1P82_RS13550	COG3217	Mosc domain protein beta barrel domain protein
C1P82_RS13570	COG3539	Fimbrial protein
C1P82_RS13575	COG3539	Fimbrial protein
C1P82_RS13580	COG3539	Fimbrial protein
C1P82_RS13585	COG3188	usher protein
C1P82_RS13590	COG3121	Chaperone
C1P82_RS13605	COG3539	Fimbrial protein
C1P82_RS13615	COG0431	NADPH-dependent FMN reductase
C1P82_RS13620	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
C1P82_RS13630	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C1P82_RS13650	COG0308	aminopeptidase N
C1P82_RS13670	COG1448	Aminotransferase
C1P82_RS13675	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C1P82_RS13680	COG3108	Peptidase M15
C1P82_RS13685	COG2989	Protein conserved in bacteria
C1P82_RS13690	COG3385	transposase activity
C1P82_RS13700	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
C1P82_RS13710	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
C1P82_RS13715	COG1434	Gram-negative-bacterium-type cell wall biogenesis
C1P82_RS13720	COG3173	Aminoglycoside phosphotransferase
C1P82_RS13735	COG3214	Protein conserved in bacteria
C1P82_RS13760	COG0539	negative regulation of cytoplasmic translation
C1P82_RS13770	COG0501	Belongs to the peptidase M48B family
C1P82_RS13775	COG3385	transposase activity
C1P82_RS13795	COG1944	ATP diphosphatase activity
C1P82_RS13800	COG2116	formate transmembrane transporter activity
C1P82_RS13805	COG1882	Formate acetyltransferase
C1P82_RS13810	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
C1P82_RS13815	COG2249	NAD(P)H dehydrogenase (quinone) activity
C1P82_RS13835	COG0583	DNA-binding transcription factor activity
C1P82_RS13870	COG3436	PFAM IS66 Orf2 family protein
C1P82_RS13890	COG1335	isochorismatase
C1P82_RS13895	COG3302	dmso reductase anchor subunit
C1P82_RS13900	COG0437	4 iron, 4 sulfur cluster binding
C1P82_RS13915	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
C1P82_RS13930	COG1522	sequence-specific DNA binding
C1P82_RS13935	COG0492	ferredoxin-NADP+ reductase activity
C1P82_RS13940	COG4988	ABC transporter
C1P82_RS13945	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
C1P82_RS13970	COG0542	response to heat
C1P82_RS13980	COG1278	Cold shock
C1P82_RS13990	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C1P82_RS13995	COG2990	Protein conserved in bacteria
C1P82_RS14000	COG3593	DNA synthesis involved in DNA repair
C1P82_RS14020	COG2431	L-lysine efflux transmembrane transporter activity
C1P82_RS14030	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
C1P82_RS14035	COG0028	Belongs to the TPP enzyme family
C1P82_RS14040	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
C1P82_RS14045	COG0702	epimerase
C1P82_RS14050	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C1P82_RS14055	COG3023	N-Acetylmuramoyl-L-alanine amidase
C1P82_RS14095	COG1126	abc transporter atp-binding protein
C1P82_RS14100	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P82_RS14105	COG4215	(ABC) transporter
C1P82_RS14110	COG4160	amino acid transport
C1P82_RS14115	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P82_RS14130	COG1177	transmembrane transport
C1P82_RS14135	COG1176	ABC-type spermidine putrescine transport system, permease component I
C1P82_RS14145	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
C1P82_RS14160	COG0778	Nitroreductase
C1P82_RS14170	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
C1P82_RS14185	COG3226	Transcriptional regulator
C1P82_RS14190	COG0738	Major facilitator superfamily
C1P82_RS14195	COG0561	phosphatase activity
C1P82_RS14205	COG2814	Major facilitator Superfamily
C1P82_RS14210	COG0671	phosphoesterase, PA-phosphatase related
C1P82_RS14215	COG1349	DNA-binding transcription factor activity
C1P82_RS14230	COG1686	Belongs to the peptidase S11 family
C1P82_RS14235	COG0625	glutathione transferase activity
C1P82_RS14240	COG2133	pyrroloquinoline quinone binding
C1P82_RS14245	COG2133	pyrroloquinoline quinone binding
C1P82_RS14260	COG2199	diguanylate cyclase activity
C1P82_RS14265	COG2200	EAL domain
C1P82_RS14290	COG1446	asparaginase
C1P82_RS14295	COG0303	'Molybdopterin
C1P82_RS14300	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
C1P82_RS14305	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
C1P82_RS14310	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
C1P82_RS14315	COG1882	Formate acetyltransferase
C1P82_RS14320	COG0561	phosphatase activity
C1P82_RS14330	COG0488	(ABC) transporter
C1P82_RS14335	COG1376	ErfK ybiS ycfS ynhG family protein
C1P82_RS14340	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
C1P82_RS14345	COG1321	iron dependent repressor
C1P82_RS14355	COG2194	sulfuric ester hydrolase activity
C1P82_RS14360	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
C1P82_RS14370	COG5006	permease, DMT superfamily
C1P82_RS14380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P82_RS14385	COG0765	amino acid transport
C1P82_RS14390	COG1126	abc transporter atp-binding protein
C1P82_RS14415	COG3385	transposase activity
C1P82_RS14430	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
C1P82_RS14440	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
C1P82_RS14445	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C1P82_RS14465	COG1309	transcriptional regulator
C1P82_RS14475	COG1131	(ABC) transporter
C1P82_RS14480	COG0842	Transport permease protein
C1P82_RS14485	COG0842	Transport permease protein
C1P82_RS14495	COG3568	Endonuclease Exonuclease Phosphatase
C1P82_RS14505	COG0392	lysyltransferase activity
C1P82_RS14510	COG0670	Belongs to the BI1 family
C1P82_RS14515	COG0670	Belongs to the BI1 family
C1P82_RS14520	COG0314	molybdopterin synthase activity
C1P82_RS14525	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
C1P82_RS14535	COG0521	Mo-molybdopterin cofactor biosynthetic process
C1P82_RS14545	COG0391	Required for morphogenesis under gluconeogenic growth conditions
C1P82_RS14555	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
C1P82_RS14560	COG2226	methyltransferase
C1P82_RS14575	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
C1P82_RS14580	COG1881	PFAM PEBP family protein
C1P82_RS14590	COG2246	polysaccharide biosynthetic process
C1P82_RS14695	COG3646	Phage regulatory protein
C1P82_RS14780	COG0305	Participates in initiation and elongation during chromosome replication
C1P82_RS14840	COG3723	Recombinational DNA repair protein, rece pathway
C1P82_RS14895	COG0582	viral genome integration into host DNA
C1P82_RS14900	COG4677	pectinesterase activity
C1P82_RS14905	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
C1P82_RS14910	COG0471	metal ion transport
C1P82_RS14915	COG2828	Protein conserved in bacteria
C1P82_RS14930	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
C1P82_RS14960	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
C1P82_RS14975	COG3646	Phage regulatory protein
C1P82_RS15000	COG1396	sequence-specific DNA binding
C1P82_RS15035	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
C1P82_RS15105	COG3772	lysozyme
C1P82_RS15115	COG3436	PFAM IS66 Orf2 family protein
C1P82_RS15120	COG4372	Transposase
C1P82_RS15155	COG1783	phage Terminase large subunit
C1P82_RS15210	COG3423	Transcriptional regulator
C1P82_RS15225	COG3069	C4-dicarboxylate transmembrane transporter activity
C1P82_RS15245	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C1P82_RS15250	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
C1P82_RS15260	COG0583	DNA-binding transcription factor activity
C1P82_RS15275	COG1686	Belongs to the peptidase S11 family
C1P82_RS15280	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
C1P82_RS15285	COG0772	Belongs to the SEDS family
C1P82_RS15290	COG0768	penicillin binding
C1P82_RS15300	COG0799	negative regulation of ribosome biogenesis
C1P82_RS15305	COG0406	alpha-ribazole phosphatase activity
C1P82_RS15315	COG1466	dna polymerase III delta subunit
C1P82_RS15330	COG2888	peptidyl-tyrosine sulfation
C1P82_RS15335	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
C1P82_RS15345	COG2214	Heat shock protein DnaJ domain protein
C1P82_RS15350	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
C1P82_RS15360	COG2214	Heat shock protein DnaJ domain protein
C1P82_RS15365	COG0443	Heat shock 70 kDa protein
C1P82_RS15375	COG1126	abc transporter atp-binding protein
C1P82_RS15380	COG0765	amino acid transport
C1P82_RS15385	COG0765	amino acid transport
C1P82_RS15390	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C1P82_RS15395	COG0815	Transfers the fatty acyl group on membrane lipoproteins
C1P82_RS15400	COG4535	Mg2 and Co2 transporter CorC
C1P82_RS15410	COG1702	phosphate starvation-inducible protein PhoH
C1P82_RS15420	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
C1P82_RS15460	COG0367	asparagine synthase
C1P82_RS15465	COG0647	UMP catabolic process
C1P82_RS15470	COG1846	Transcriptional regulator
C1P82_RS15470	COG1940	carbohydrate kinase activity
C1P82_RS15475	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
C1P82_RS15485	COG2190	(PTS) system
C1P82_RS15485	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P82_RS15485	COG1263	PTS System
C1P82_RS15505	COG0735	belongs to the Fur family
C1P82_RS15515	COG0716	FMN binding
C1P82_RS15525	COG0596	Alpha beta hydrolase
C1P82_RS15530	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
C1P82_RS15535	COG0033	Phosphoglucomutase
C1P82_RS15540	COG0531	amino acid
C1P82_RS15560	COG0745	RESPONSE REGULATOR receiver
C1P82_RS15610	COG3209	COG3209 Rhs family protein
C1P82_RS15625	COG3272	Protein of unknown function (DUF1722)
C1P82_RS15630	COG0415	Belongs to the DNA photolyase family
C1P82_RS15640	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
C1P82_RS15645	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
C1P82_RS15665	COG3180	Ammonia monooxygenase
C1P82_RS15675	COG3121	Chaperone
C1P82_RS15680	COG3188	usher protein
C1P82_RS15685	COG3539	Fimbrial protein
C1P82_RS15690	COG0372	Belongs to the citrate synthase family
C1P82_RS15700	COG2009	succinate dehydrogenase
C1P82_RS15705	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
C1P82_RS15710	COG1053	succinate dehydrogenase
C1P82_RS15715	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
C1P82_RS15720	COG0567	Dehydrogenase, E1 component
C1P82_RS15725	COG0508	dehydrogenase complex catalyzes the overall conversion of
C1P82_RS15735	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
C1P82_RS15740	COG2188	Transcriptional regulator
C1P82_RS15750	COG0383	alpha-mannosidase activity
C1P82_RS15760	COG1271	oxidase subunit
C1P82_RS15765	COG1294	oxidase, subunit
C1P82_RS15770	COG4890	Cyd operon protein YbgT
C1P82_RS15775	COG3790	cyd operon protein YbgE
C1P82_RS15780	COG0824	Thioesterase
C1P82_RS15785	COG0811	peptide transport
C1P82_RS15790	COG0848	biopolymer transport protein
C1P82_RS15795	COG3064	Membrane
C1P82_RS15805	COG2885	chlorophyll binding
C1P82_RS15810	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
C1P82_RS15845	COG3201	nicotinamide mononucleotide transporter
C1P82_RS15860	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
C1P82_RS15870	COG2017	converts alpha-aldose to the beta-anomer
C1P82_RS15880	COG1085	galactose-1-phosphate uridylyltransferase
C1P82_RS15885	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
C1P82_RS15890	COG1119	ATPase activity
C1P82_RS15895	COG3585	molybdate ion transport
C1P82_RS15895	COG2005	Transcriptional regulator
C1P82_RS15905	COG0725	ABC transporter, periplasmic molybdate-binding protein
C1P82_RS15910	COG4149	molybdate abc transporter
C1P82_RS15920	COG0561	phosphatase activity
C1P82_RS15925	COG0582	viral genome integration into host DNA
C1P82_RS15945	COG2301	Belongs to the HpcH HpaI aldolase family
C1P82_RS15950	COG3051	citrate lyase alpha subunit
C1P82_RS15965	COG0471	metal ion transport
C1P82_RS15970	COG3719	Belongs to the RNase T2 family
C1P82_RS15980	COG1063	alcohol dehydrogenase
C1P82_RS15990	COG3634	alkyl hydroperoxide reductase activity
C1P82_RS15995	COG0450	alkyl hydroperoxide reductase
C1P82_RS16000	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C1P82_RS16005	COG0583	DNA-binding transcription factor activity
C1P82_RS16025	COG1475	DNA binding
C1P82_RS16040	COG0436	Aminotransferase
C1P82_RS16045	COG0371	Dehydrogenase
C1P82_RS16050	COG2879	small protein
C1P82_RS16055	COG1966	Carbon starvation protein
C1P82_RS16060	COG2050	protein possibly involved in aromatic compounds catabolism
C1P82_RS16065	COG1028	Short-chain dehydrogenase reductase Sdr
C1P82_RS16070	COG1535	isochorismatase
C1P82_RS16070	COG3433	isochorismatase activity
C1P82_RS16075	COG1021	2,3-dihydroxybenzoate-AMP ligase
C1P82_RS16085	COG4592	Periplasmic binding protein
C1P82_RS16095	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1P82_RS16100	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1P82_RS16105	COG1120	ATPase activity
C1P82_RS16125	COG3251	PFAM MbtH domain protein
C1P82_RS16130	COG2382	esterase
C1P82_RS16135	COG4771	TonB-dependent receptor
C1P82_RS16140	COG2977	Belongs to the P-Pant transferase superfamily
C1P82_RS16210	COG2315	Protein conserved in bacteria
C1P82_RS16215	COG0778	Nitroreductase
C1P82_RS16220	COG0668	transmembrane transport
C1P82_RS16225	COG1113	amino acid transport
C1P82_RS16230	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C1P82_RS16280	COG5434	Belongs to the glycosyl hydrolase 28 family
C1P82_RS16300	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C1P82_RS16305	COG1538	Outer membrane efflux protein
C1P82_RS16310	COG0745	RESPONSE REGULATOR receiver
C1P82_RS16315	COG5002	protein histidine kinase activity
C1P82_RS16320	COG1215	transferase activity, transferring glycosyl groups
C1P82_RS16340	COG2207	Transcriptional regulator
C1P82_RS16350	COG2197	response regulator
C1P82_RS16360	COG3539	Fimbrial protein
C1P82_RS16380	COG3539	Fimbrial protein
C1P82_RS16390	COG2501	S4 domain
C1P82_RS16395	COG1988	membrane-bound metal-dependent
C1P82_RS16405	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
C1P82_RS16415	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
C1P82_RS16420	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
C1P82_RS16425	COG0549	Belongs to the carbamate kinase family
C1P82_RS16435	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
C1P82_RS16440	COG3257	ureidoglycine aminohydrolase activity
C1P82_RS16455	COG3960	tartronate-semialdehyde synthase activity
C1P82_RS16460	COG1414	Transcriptional regulator
C1P82_RS16470	COG0583	DNA-binding transcription factor activity
C1P82_RS16480	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
C1P82_RS16485	COG4181	ATPase activity
C1P82_RS16495	COG0300	oxidoreductase activity
C1P82_RS16500	COG3118	belongs to the thioredoxin family
C1P82_RS16505	COG0390	transport system, permease component
C1P82_RS16510	COG4619	ABC transporter
C1P82_RS16515	COG0330	HflC and HflK could
C1P82_RS16520	COG1585	Membrane protein implicated in regulation of membrane protease activity
C1P82_RS16525	COG0789	Transcriptional regulator
C1P82_RS16530	COG0531	amino acid
C1P82_RS16540	COG2217	Heavy metal translocating P-type atpase
C1P82_RS16545	COG3093	addiction module antidote protein HigA
C1P82_RS16555	COG3735	TraB family
C1P82_RS16560	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
C1P82_RS16565	COG0737	Belongs to the 5'-nucleotidase family
C1P82_RS16570	COG2223	nitrite transmembrane transporter activity
C1P82_RS16575	COG4651	solute:proton antiporter activity
C1P82_RS16575	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
C1P82_RS16580	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P82_RS16615	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
C1P82_RS16625	COG2832	Protein of unknown function (DUF454)
C1P82_RS16630	COG3923	Primosomal replication protein n
C1P82_RS16640	COG1196	nuclear chromosome segregation
C1P82_RS16640	COG3264	Mechanosensitive ion channel
C1P82_RS16645	COG1309	transcriptional regulator
C1P82_RS16650	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
C1P82_RS16655	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C1P82_RS16670	COG0110	maltose O-acetyltransferase activity
C1P82_RS16680	COG4943	cyclic-guanylate-specific phosphodiesterase activity
C1P82_RS16685	COG5507	3-demethylubiquinone-9 3-methyltransferase
C1P82_RS16695	COG3695	enzyme binding
C1P82_RS16700	COG3385	transposase activity
C1P82_RS16705	COG3126	Type III secretion system lipoprotein chaperone (YscW)
C1P82_RS16710	COG1946	Acyl-CoA thioesterase
C1P82_RS16715	COG0004	ammonium transporteR
C1P82_RS16720	COG0347	Belongs to the P(II) protein family
C1P82_RS16725	COG1132	(ABC) transporter
C1P82_RS16730	COG1132	(ABC) transporter
C1P82_RS16735	COG1522	sequence-specific DNA binding
C1P82_RS16745	COG4533	DNA binding
C1P82_RS16755	COG0824	Thioesterase
C1P82_RS16760	COG1555	photosystem II stabilization
C1P82_RS16765	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C1P82_RS16770	COG0776	regulation of translation
C1P82_RS16775	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
C1P82_RS16795	COG0271	Belongs to the BolA IbaG family
C1P82_RS16800	COG3056	Lipoprotein
C1P82_RS16805	COG2223	nitrite transmembrane transporter activity
C1P82_RS16820	COG3436	PFAM IS66 Orf2 family protein
C1P82_RS16825	COG4372	Transposase
C1P82_RS16845	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
C1P82_RS16885	COG2814	Major facilitator Superfamily
C1P82_RS16905	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
C1P82_RS16910	COG0693	protein deglycase activity
C1P82_RS16925	COG0142	geranyltranstransferase activity
C1P82_RS16935	COG0667	Aldo Keto reductase
C1P82_RS16940	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
C1P82_RS16945	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
C1P82_RS16960	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C1P82_RS16960	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C1P82_RS16970	COG4238	major outer membrane lipoprotein
C1P82_RS16975	COG3248	Nucleoside-binding outer membrane protein
C1P82_RS16980	COG1403	HNH endonuclease
C1P82_RS16985	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
C1P82_RS16990	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
C1P82_RS16995	COG1862	Preprotein translocase
C1P82_RS17015	COG0366	Alpha amylase catalytic
C1P82_RS17020	COG1113	amino acid transport
C1P82_RS17025	COG1114	Component of the transport system for branched-chain amino acids
C1P82_RS17030	COG5002	protein histidine kinase activity
C1P82_RS17040	COG0420	3'-5' exonuclease activity
C1P82_RS17045	COG0419	ATPase involved in DNA repair
C1P82_RS17050	COG2814	Major facilitator Superfamily
C1P82_RS17055	COG1940	carbohydrate kinase activity
C1P82_RS17080	COG4126	flavin adenine dinucleotide binding
C1P82_RS17100	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
C1P82_RS17105	COG3706	GGDEF domain
C1P82_RS17130	COG1181	Belongs to the D-alanine--D-alanine ligase family
C1P82_RS17150	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
C1P82_RS17155	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
C1P82_RS17160	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C1P82_RS17185	COG0113	porphobilinogen synthase activity
C1P82_RS17190	COG2175	clavaminate synthase activity
C1P82_RS17195	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C1P82_RS17205	COG4521	taurine ABC transporter
C1P82_RS17215	COG3423	Transcriptional regulator
C1P82_RS17230	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C1P82_RS17255	COG1556	Lactate utilization protein
C1P82_RS17260	COG1139	Iron-sulfur cluster binding protein
C1P82_RS17265	COG0247	lactate metabolic process
C1P82_RS17325	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
C1P82_RS17335	COG1960	acyl-CoA dehydrogenase activity
C1P82_RS17345	COG0121	glutamine amidotransferase
C1P82_RS17350	COG3034	peptidoglycan biosynthetic process
C1P82_RS17355	COG0791	NLP P60 protein
C1P82_RS17360	COG1943	Transposase
C1P82_RS17380	COG2161	toxin-antitoxin pair type II binding
C1P82_RS17390	COG0454	-acetyltransferase
C1P82_RS17395	COG1690	Belongs to the RtcB family
C1P82_RS17405	COG2195	Cleaves the N-terminal amino acid of tripeptides
C1P82_RS17425	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
C1P82_RS17460	COG0582	viral genome integration into host DNA
C1P82_RS17465	COG2246	polysaccharide biosynthetic process
C1P82_RS17490	COG3778	Protein conserved in bacteria
C1P82_RS17495	COG3299	homolog of phage Mu protein gp47
C1P82_RS17515	COG4228	DNA circulation
C1P82_RS17540	COG4386	tail sheath protein
C1P82_RS17585	COG4695	Portal protein
C1P82_RS17705	COG3772	lysozyme
C1P82_RS17765	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
C1P82_RS17775	COG2226	methyltransferase
C1P82_RS17785	COG0741	lytic transglycosylase activity
C1P82_RS17785	COG1388	LysM domain
C1P82_RS17790	COG2226	methyltransferase
C1P82_RS17800	COG0583	DNA-binding transcription factor activity
C1P82_RS17805	COG3385	transposase activity
C1P82_RS17810	COG0656	L-ascorbic acid biosynthetic process
C1P82_RS17845	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
C1P82_RS17850	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
C1P82_RS17855	COG2011	ABC-type metal ion transport system permease component
C1P82_RS17860	COG1464	Belongs to the NlpA lipoprotein family
C1P82_RS17870	COG1720	tRNA m6t6A37 methyltransferase activity
C1P82_RS17880	COG0791	NLP P60 protein
C1P82_RS17885	COG3015	lipoprotein NlpE involved in copper resistance
C1P82_RS17890	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
C1P82_RS17895	COG4681	YaeQ
C1P82_RS17905	COG4568	rho-dependent transcription termination
C1P82_RS17915	COG0346	lactoylglutathione lyase activity
C1P82_RS17920	COG1982	Orn Lys Arg decarboxylase major
C1P82_RS17930	COG0587	DNA-directed DNA polymerase activity
C1P82_RS17955	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
C1P82_RS17960	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
C1P82_RS17970	COG0750	zinc metalloprotease
C1P82_RS17975	COG0575	Belongs to the CDS family
C1P82_RS17980	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
C1P82_RS18010	COG0024	Methionine aminopeptidase
C1P82_RS18035	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C1P82_RS18055	COG2860	membrane
C1P82_RS18080	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C1P82_RS18085	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
C1P82_RS18090	COG1120	ATPase activity
C1P82_RS18095	COG4774	siderophore transport
C1P82_RS18100	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C1P82_RS18105	COG1643	Atp-dependent helicase
C1P82_RS18110	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
C1P82_RS18120	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
C1P82_RS18130	COG0617	tRNA 3'-terminal CCA addition
C1P82_RS18135	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
C1P82_RS18160	COG5464	transposase or invertase
C1P82_RS18170	COG0726	polysaccharide deacetylase
C1P82_RS18175	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
C1P82_RS18180	COG0842	Transport permease protein
C1P82_RS18185	COG1131	(ABC) transporter
C1P82_RS18190	COG0288	reversible hydration of carbon dioxide
C1P82_RS18195	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
C1P82_RS18200	COG4993	Dehydrogenase
C1P82_RS18205	COG2132	Multicopper oxidase
C1P82_RS18230	COG1049	propionate catabolic process, 2-methylcitrate cycle
C1P82_RS18235	COG3064	Membrane
C1P82_RS18240	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C1P82_RS18245	COG0508	dehydrogenase complex catalyzes the overall conversion of
C1P82_RS18250	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
C1P82_RS18255	COG2186	Transcriptional regulator
C1P82_RS18265	COG3725	Membrane protein required for beta-lactamase induction
C1P82_RS18270	COG3023	N-Acetylmuramoyl-L-alanine amidase
C1P82_RS18275	COG0157	Belongs to the NadC ModD family
C1P82_RS18280	COG4969	Belongs to the N-Me-Phe pilin family
C1P82_RS18290	COG1459	type II secretion system
C1P82_RS18315	COG0494	nUDIX hydrolase
C1P82_RS18335	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
C1P82_RS18340	COG0849	cell division
C1P82_RS18345	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
C1P82_RS18365	COG0772	Belongs to the SEDS family
C1P82_RS18370	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
C1P82_RS18380	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
C1P82_RS18390	COG0768	penicillin binding
C1P82_RS18395	COG3116	cell division
C1P82_RS18415	COG1609	Transcriptional regulator
C1P82_RS18425	COG0440	acetolactate synthase activity
C1P82_RS18430	COG0028	Belongs to the TPP enzyme family
C1P82_RS18435	COG0583	DNA-binding transcription factor activity
C1P82_RS18465	COG2814	Major facilitator Superfamily
C1P82_RS18480	COG4143	(ABC) transporter
C1P82_RS18485	COG1178	ABC-type Fe3 transport system permease component
C1P82_RS18495	COG0586	Pfam SNARE associated Golgi protein
C1P82_RS18500	COG4977	sequence-specific DNA binding
C1P82_RS18515	COG0235	Class ii aldolase
C1P82_RS18520	COG0417	DNA replication proofreading
C1P82_RS18530	COG0564	pseudouridine synthase activity
C1P82_RS18535	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
C1P82_RS18545	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C1P82_RS18570	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
C1P82_RS18585	COG2271	Major facilitator Superfamily
C1P82_RS18645	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
C1P82_RS18650	COG0505	Belongs to the CarA family
C1P82_RS18670	COG1047	Peptidyl-prolyl cis-trans
C1P82_RS18685	COG0196	riboflavin kinase activity
C1P82_RS18710	COG0583	DNA-binding transcription factor activity
C1P82_RS18740	COG4735	regulation of single-species biofilm formation
C1P82_RS18745	COG1584	GPR1 FUN34 yaaH family protein
C1P82_RS18750	COG0521	Mo-molybdopterin cofactor biosynthetic process
C1P82_RS18755	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
C1P82_RS18775	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
C1P82_RS18785	COG0527	aspartate kinase activity
C1P82_RS18785	COG0460	homoserine dehydrogenase
C1P82_RS18795	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
C1P82_RS18805	COG0745	RESPONSE REGULATOR receiver
C1P82_RS18810	COG4452	Inner membrane protein CreD
C1P82_RS18815	COG2205	protein histidine kinase activity
C1P82_RS18820	COG0745	RESPONSE REGULATOR receiver
C1P82_RS18825	COG3045	CreA protein
C1P82_RS18830	COG3708	Transcriptional regulator
C1P82_RS18830	COG2207	Transcriptional regulator
C1P82_RS18850	COG0741	lytic transglycosylase activity
C1P82_RS18855	COG0488	(ABC) transporter
C1P82_RS18860	COG3172	ATPase kinase involved in NAD metabolism
C1P82_RS18860	COG1056	cytidyltransferase-related domain
C1P82_RS18865	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
C1P82_RS18870	COG0560	Phosphoserine phosphatase
C1P82_RS18875	COG3726	membrane protein affecting hemolysin expression
C1P82_RS18910	COG1328	CTP reductase activity
C1P82_RS18915	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
C1P82_RS18920	COG0084	hydrolase, TatD family'
C1P82_RS18925	COG4667	esterase of the alpha-beta hydrolase superfamily
C1P82_RS18935	COG2823	Periplasmic or secreted lipoprotein
C1P82_RS18945	COG1011	Hydrolase
C1P82_RS18950	COG0456	acetyltransferase
C1P82_RS18955	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
C1P82_RS18985	COG4114	ferric iron reductase
C1P82_RS18990	COG2197	response regulator
C1P82_RS18995	COG2197	response regulator
C1P82_RS19005	COG2966	Psort location CytoplasmicMembrane, score
C1P82_RS19020	COG1484	DNA-dependent DNA replication
C1P82_RS19045	COG2271	Major facilitator Superfamily
C1P82_RS19050	COG0840	transmembrane signaling receptor activity
C1P82_RS19055	COG1846	Transcriptional regulator
C1P82_RS19065	COG1012	belongs to the aldehyde dehydrogenase family
C1P82_RS19070	COG3384	dioxygenase
C1P82_RS19080	COG3971	2-oxopent-4-enoate hydratase activity
C1P82_RS19110	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C1P82_RS19115	COG1966	Carbon starvation protein
C1P82_RS19120	COG2879	small protein
C1P82_RS19125	COG0523	cobalamin synthesis protein
C1P82_RS19150	COG0732	type I restriction modification DNA specificity domain
C1P82_RS19190	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
C1P82_RS19250	COG1073	alpha beta
C1P82_RS19255	COG3650	response to hydrogen peroxide
C1P82_RS19265	COG1960	acyl-CoA dehydrogenase activity
C1P82_RS19270	COG0754	glutathionylspermidine amidase activity
C1P82_RS19275	COG5463	Belongs to the UPF0441 family
C1P82_RS19280	COG3766	membrane
C1P82_RS19290	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C1P82_RS19295	COG0557	exoribonuclease II activity
C1P82_RS19310	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
C1P82_RS19315	COG0330	HflC and HflK could
C1P82_RS19320	COG0330	HflC and HflK could
C1P82_RS19325	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
C1P82_RS19345	COG0860	N-Acetylmuramoyl-L-alanine amidase
C1P82_RS19350	COG0802	atpase or kinase
C1P82_RS19355	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
C1P82_RS19355	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
C1P82_RS19360	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
C1P82_RS19405	COG1511	domain protein
C1P82_RS19405	COG3264	Mechanosensitive ion channel
C1P82_RS19420	COG1053	succinate dehydrogenase
C1P82_RS19425	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
C1P82_RS19440	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
C1P82_RS19445	COG3040	lipid binding
C1P82_RS19450	COG2076	Multidrug Resistance protein
C1P82_RS19455	COG5510	response to toxic substance
C1P82_RS19460	COG5510	response to toxic substance
C1P82_RS19470	COG1509	lysine 2,3-aminomutase activity
C1P82_RS19505	COG0531	amino acid
C1P82_RS19510	COG3030	protein affecting phage T7 exclusion by the F plasmid
C1P82_RS19515	COG1027	Aspartate ammonia-lyase
C1P82_RS19520	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
C1P82_RS19535	COG1309	transcriptional regulator
C1P82_RS19575	COG1309	transcriptional regulator
C1P82_RS19580	COG3061	Opacity-associated protein A
C1P82_RS19590	COG0545	Peptidyl-prolyl cis-trans isomerase
C1P82_RS19595	COG1113	amino acid transport
C1P82_RS19605	COG0697	spore germination
C1P82_RS19610	COG0702	epimerase
C1P82_RS19615	COG1733	regulation of RNA biosynthetic process
C1P82_RS19620	COG0737	Belongs to the 5'-nucleotidase family
C1P82_RS19635	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
C1P82_RS19645	COG1253	flavin adenine dinucleotide binding
C1P82_RS19655	COG0729	surface antigen
C1P82_RS19660	COG2911	Protein conserved in bacteria
C1P82_RS19665	COG2105	PFAM AIG2 family protein
C1P82_RS19670	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
C1P82_RS19680	COG1129	ABC transporter
C1P82_RS19685	COG1172	Belongs to the binding-protein-dependent transport system permease family
C1P82_RS19695	COG3385	transposase activity
C1P82_RS19705	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
C1P82_RS19715	COG0312	modulator of DNA gyrase
C1P82_RS19720	COG3783	Cytochrome b(562)
C1P82_RS19725	COG0602	queuosine metabolic process
C1P82_RS19730	COG1328	CTP reductase activity
C1P82_RS19735	COG0366	Alpha amylase catalytic
C1P82_RS19740	COG1263	PTS System
C1P82_RS19740	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P82_RS19745	COG1609	Transcriptional regulator
C1P82_RS19755	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
C1P82_RS19760	COG0251	oxidation-reduction process
C1P82_RS19780	COG0251	oxidation-reduction process
C1P82_RS19785	COG1028	Short-chain dehydrogenase reductase Sdr
C1P82_RS19790	COG1309	transcriptional regulator
C1P82_RS19795	COG2731	YhcH YjgK YiaL family protein
C1P82_RS19815	COG3076	Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome
C1P82_RS19820	COG0456	acetyltransferase
C1P82_RS19825	COG4269	membrane
C1P82_RS19835	COG2927	DNA polymerase III (CHI subunit)
C1P82_RS19845	COG0795	lipopolysaccharide-transporting ATPase activity
C1P82_RS19850	COG0795	lipopolysaccharide-transporting ATPase activity
C1P82_RS19855	COG0433	COG0433 Predicted ATPase
C1P82_RS19860	COG1064	alcohol dehydrogenase
C1P82_RS19895	COG0440	acetolactate synthase activity
C1P82_RS19900	COG1349	DNA-binding transcription factor activity
C1P82_RS19920	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
C1P82_RS19930	COG4974	Belongs to the 'phage' integrase family
C1P82_RS19940	COG3539	Fimbrial protein
C1P82_RS19945	COG3121	Chaperone
C1P82_RS19950	COG3188	usher protein
C1P82_RS19955	COG3539	Fimbrial protein
C1P82_RS19960	COG3539	Fimbrial protein
C1P82_RS19965	COG3539	Fimbrial protein
C1P82_RS19970	COG2610	gluconate transmembrane transporter activity
C1P82_RS19980	COG0246	Mannitol dehydrogenase
C1P82_RS19985	COG2186	Transcriptional regulator
C1P82_RS20005	COG0583	DNA-binding transcription factor activity
C1P82_RS20010	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
C1P82_RS20015	COG0700	Nucleoside recognition
C1P82_RS20020	COG3366	ferrous iron transmembrane transporter activity
C1P82_RS20040	COG3436	PFAM IS66 Orf2 family protein
C1P82_RS20045	COG4372	Transposase
C1P82_RS20050	COG0527	aspartate kinase activity
C1P82_RS20080	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
C1P82_RS20120	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
C1P82_RS20130	COG0534	Mate efflux family protein
C1P82_RS20135	COG3237	CsbD-like
C1P82_RS20140	COG0735	belongs to the Fur family
C1P82_RS20155	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
C1P82_RS20165	COG0604	alcohol dehydrogenase
C1P82_RS20170	COG0305	Participates in initiation and elongation during chromosome replication
C1P82_RS20175	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
C1P82_RS20180	COG1448	Aminotransferase
C1P82_RS20195	COG3700	Belongs to the class B bacterial acid phosphatase family
C1P82_RS20200	COG0432	Pfam Uncharacterised protein family UPF0047
C1P82_RS20205	COG2315	Protein conserved in bacteria
C1P82_RS20210	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
C1P82_RS20215	COG0629	single-stranded DNA binding
C1P82_RS20235	COG4943	cyclic-guanylate-specific phosphodiesterase activity
C1P82_RS20240	COG2207	Transcriptional regulator
C1P82_RS20245	COG0789	Transcriptional regulator
C1P82_RS20250	COG2252	PERMEase
C1P82_RS20255	COG0025	NhaP-type Na H and K H
C1P82_RS20270	COG3162	membrane
C1P82_RS20275	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C1P82_RS20285	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
C1P82_RS20290	COG0437	4 iron, 4 sulfur cluster binding
C1P82_RS20295	COG3301	Polysulphide reductase, NrfD
C1P82_RS20300	COG1138	Cytochrome C-type biogenesis protein
C1P82_RS20305	COG3088	subunit of a heme lyase
C1P82_RS20310	COG4235	cytochrome complex assembly
C1P82_RS20315	COG1301	dicarboxylic acid transport
C1P82_RS20320	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
C1P82_RS20350	COG3639	organic phosphonate transmembrane transporter activity
C1P82_RS20355	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
C1P82_RS20365	COG2764	glyoxalase bleomycin resistance protein dioxygenase
C1P82_RS20370	COG2824	Alkylphosphonate utilization operon protein PhnA
C1P82_RS20375	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
C1P82_RS20385	COG0477	Major facilitator Superfamily
C1P82_RS20395	COG0642	Histidine kinase
C1P82_RS20400	COG0745	RESPONSE REGULATOR receiver
C1P82_RS20405	COG2194	sulfuric ester hydrolase activity
C1P82_RS20410	COG0531	amino acid
C1P82_RS20415	COG2207	Transcriptional regulator
C1P82_RS20420	COG1982	Orn Lys Arg decarboxylase major
C1P82_RS20425	COG2169	Transcriptional regulator
C1P82_RS20430	COG1486	melibiose metabolic process
C1P82_RS20435	COG2211	Major facilitator Superfamily
C1P82_RS20445	COG3647	Membrane
C1P82_RS20450	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
C1P82_RS20450	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
C1P82_RS20455	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
C1P82_RS20470	COG3592	Divergent 4Fe-4S mono-cluster
C1P82_RS20535	COG1283	sodium-dependent phosphate transmembrane transporter activity
C1P82_RS20540	COG0646	methionine synthase
C1P82_RS20540	COG1410	methionine synthase
C1P82_RS20545	COG1414	Transcriptional regulator
C1P82_RS20560	COG2224	Isocitrate lyase
C1P82_RS20575	COG0456	acetyltransferase
C1P82_RS20605	COG0151	Belongs to the GarS family
C1P82_RS20610	COG2204	response regulator
C1P82_RS20615	COG4191	Histidine kinase
C1P82_RS20620	COG3678	ATP-independent chaperone mediated protein folding
C1P82_RS20635	COG3068	Protein conserved in bacteria
C1P82_RS20670	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
C1P82_RS20675	COG2104	thiamine diphosphate biosynthetic process
C1P82_RS20685	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
C1P82_RS20720	COG0250	Participates in transcription elongation, termination and antitermination
C1P82_RS20725	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
C1P82_RS20760	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
C1P82_RS20760	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
C1P82_RS20790	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
C1P82_RS20795	COG4206	TonB-dependent receptor
C1P82_RS20810	COG1309	transcriptional regulator
C1P82_RS20820	COG0583	DNA-binding transcription factor activity
C1P82_RS20840	COG4948	Mandelate Racemase Muconate Lactonizing
C1P82_RS20845	COG3385	transposase activity
C1P82_RS20875	COG2194	sulfuric ester hydrolase activity
C1P82_RS20880	COG2207	Transcriptional regulator
C1P82_RS20885	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P82_RS20890	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
C1P82_RS20895	COG1882	Formate acetyltransferase
C1P82_RS20900	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P82_RS20905	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C1P82_RS20925	COG3738	Protein conserved in bacteria
C1P82_RS20930	COG0697	spore germination
C1P82_RS20940	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
C1P82_RS20945	COG0527	aspartate kinase activity
C1P82_RS20945	COG0460	homoserine dehydrogenase
C1P82_RS20950	COG0626	cystathionine gamma-synthase activity
C1P82_RS20960	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
C1P82_RS20970	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
C1P82_RS20975	COG1609	Transcriptional regulator
C1P82_RS20980	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
C1P82_RS20995	COG1575	Belongs to the MenA family. Type 1 subfamily
C1P82_RS21010	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
C1P82_RS21020	COG1494	fructose-1,6-bisphosphatase
C1P82_RS21030	COG0589	response to stress
C1P82_RS21035	COG3691	Protein conserved in bacteria
C1P82_RS21045	COG1858	cytochrome C peroxidase
C1P82_RS21065	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C1P82_RS21100	COG3274	enterobacterial common antigen metabolic process
C1P82_RS21105	COG4682	membrane
C1P82_RS21110	COG4682	membrane
C1P82_RS21115	COG1070	Carbohydrate kinase
C1P82_RS21125	COG4213	ABC transporter substrate-binding protein
C1P82_RS21145	COG2992	FlgJ-related protein
C1P82_RS21150	COG0366	Alpha amylase catalytic
C1P82_RS21155	COG3977	Valine--pyruvate aminotransferase
C1P82_RS21160	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
C1P82_RS21165	COG1414	Transcriptional regulator
C1P82_RS21190	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
C1P82_RS21195	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
C1P82_RS21200	COG1070	Carbohydrate kinase
C1P82_RS21205	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
C1P82_RS21210	COG3623	hexulose-6-phosphate isomerase
C1P82_RS21215	COG0235	Class ii aldolase
C1P82_RS21225	COG2211	Major facilitator Superfamily
C1P82_RS21235	COG3713	MltA-interacting MipA family protein
C1P82_RS21255	COG1566	PFAM secretion protein HlyD family protein
C1P82_RS21270	COG1012	belongs to the aldehyde dehydrogenase family
C1P82_RS21275	COG1454	alcohol dehydrogenase
C1P82_RS21295	COG1620	l-lactate permease
C1P82_RS21300	COG2186	Transcriptional regulator
C1P82_RS21310	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
C1P82_RS21315	COG1045	serine acetyltransferase
C1P82_RS21330	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
C1P82_RS21335	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C1P82_RS21350	COG4942	peptidase
C1P82_RS21355	COG2861	carbohydrate metabolic process
C1P82_RS21370	COG1216	Glycosyl transferase, family 2
C1P82_RS21380	COG0156	8-amino-7-oxononanoate synthase activity
C1P82_RS21395	COG0859	PFAM glycosyl transferase family 9
C1P82_RS21400	COG0859	PFAM glycosyl transferase family 9
C1P82_RS21420	COG3642	lipopolysaccharide core region biosynthetic process
C1P82_RS21430	COG0515	serine threonine protein kinase
C1P82_RS21435	COG0438	transferase activity, transferring glycosyl groups
C1P82_RS21440	COG0859	PFAM glycosyl transferase family 9
C1P82_RS21450	COG1519	Transferase
C1P82_RS21480	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
C1P82_RS21505	COG1561	YicC-like family, N-terminal region
C1P82_RS21515	COG3645	SOS response
C1P82_RS21520	COG2860	membrane
C1P82_RS21530	COG0194	GDP metabolic process
C1P82_RS21540	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
C1P82_RS21545	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C1P82_RS21550	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
C1P82_RS21555	COG0786	glutamate:sodium symporter activity
C1P82_RS21560	COG2233	PERMEase
C1P82_RS21565	COG2982	Protein involved in outer membrane biogenesis
C1P82_RS21570	COG1501	Belongs to the glycosyl hydrolase 31 family
C1P82_RS21585	COG0582	viral genome integration into host DNA
C1P82_RS21715	COG2252	PERMEase
C1P82_RS21725	COG2271	Major facilitator Superfamily
C1P82_RS21730	COG2271	Major facilitator Superfamily
C1P82_RS21735	COG3851	Histidine kinase
C1P82_RS21740	COG2197	response regulator
C1P82_RS21745	COG0440	acetolactate synthase activity
C1P82_RS21750	COG0028	Belongs to the TPP enzyme family
C1P82_RS21765	COG2814	Major facilitator Superfamily
C1P82_RS21770	COG0641	radical SAM
C1P82_RS21780	COG2149	membrane
C1P82_RS21790	COG3119	arylsulfatase activity
C1P82_RS21795	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C1P82_RS21800	COG2207	Transcriptional regulator
C1P82_RS21815	COG2188	Transcriptional regulator
C1P82_RS21835	COG5645	(Lipo)protein
C1P82_RS21840	COG0823	Involved in the tonB-independent uptake of proteins
C1P82_RS21850	COG2271	Major facilitator Superfamily
C1P82_RS21860	COG0800	Aldolase
C1P82_RS21865	COG3734	2-keto-3-deoxy-galactonokinase
C1P82_RS21870	COG2186	Transcriptional regulator
C1P82_RS21880	COG0561	phosphatase activity
C1P82_RS21890	COG0187	DNA topoisomerase II activity
C1P82_RS21900	COG0592	DNA-directed DNA polymerase activity
C1P82_RS21950	COG0814	amino acid
C1P82_RS21975	COG2091	lysine biosynthetic process via aminoadipic acid
C1P82_RS21980	COG0431	NADPH-dependent FMN reductase
C1P82_RS21985	COG2252	PERMEase
C1P82_RS21990	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C1P82_RS22005	COG3436	PFAM IS66 Orf2 family protein
C1P82_RS22010	COG4372	Transposase
C1P82_RS22015	COG3196	Protein conserved in bacteria
C1P82_RS22025	COG2382	esterase
C1P82_RS22035	COG2723	6-phospho-beta-galactosidase activity
C1P82_RS22040	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C1P82_RS22040	COG2190	(PTS) system
C1P82_RS22040	COG1263	PTS System
C1P82_RS22045	COG3711	transcriptional antiterminator
C1P82_RS22050	COG0704	Plays a role in the regulation of phosphate uptake
C1P82_RS22055	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
C1P82_RS22060	COG0581	inorganic phosphate transmembrane transporter activity
C1P82_RS22065	COG0573	inorganic phosphate transmembrane transporter activity
C1P82_RS22070	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
C1P82_RS22080	COG3188	usher protein
C1P82_RS22100	COG3385	transposase activity
C1P82_RS22120	COG1522	sequence-specific DNA binding
C1P82_RS22125	COG0716	FMN binding
C1P82_RS22140	COG3312	ion transport
C1P82_RS22210	COG1129	ABC transporter
C1P82_RS22225	COG1172	Belongs to the binding-protein-dependent transport system permease family
C1P82_RS22230	COG1879	ABC-type sugar transport system periplasmic component
C1P82_RS22235	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P82_RS22240	COG1609	Transcriptional regulator
C1P82_RS22245	COG0477	Major facilitator Superfamily
C1P82_RS22250	COG2186	Transcriptional regulator
C1P82_RS22295	COG3085	chromosome segregation
C1P82_RS22300	COG0606	chelatase, subunit chli
C1P82_RS22320	COG3978	acetolactate synthase activity
C1P82_RS22325	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
C1P82_RS22335	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
C1P82_RS22340	COG0583	DNA-binding transcription factor activity
C1P82_RS22350	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
C1P82_RS22355	COG0210	DNA helicase
C1P82_RS22370	COG3118	belongs to the thioredoxin family
C1P82_RS22380	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
C1P82_RS22385	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
C1P82_RS22390	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
C1P82_RS22395	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
C1P82_RS22400	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
C1P82_RS22405	COG1088	dTDP-glucose 4,6-dehydratase activity
C1P82_RS22410	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
C1P82_RS22415	COG0456	acetyltransferase
C1P82_RS22420	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
C1P82_RS22425	COG2244	polysaccharide biosynthetic process
C1P82_RS22445	COG1113	amino acid transport
C1P82_RS22470	COG0641	radical SAM
C1P82_RS22480	COG3071	HemY protein
C1P82_RS22485	COG2959	enzyme of heme biosynthesis
C1P82_RS22490	COG1587	Uroporphyrinogen-III synthase
C1P82_RS22500	COG3072	Adenylate cyclase
C1P82_RS22525	COG5567	small periplasmic lipoprotein
C1P82_RS22535	COG3159	Protein conserved in bacteria
C1P82_RS22545	COG1011	Hydrolase
C1P82_RS22550	COG0210	DNA helicase
C1P82_RS22555	COG3698	Phosphodiester glycosidase
C1P82_RS22560	COG3385	transposase activity
C1P82_RS22565	COG3698	Phosphodiester glycosidase
C1P82_RS22570	COG0598	Magnesium transport protein CorA
C1P82_RS22585	COG2962	Rard protein
C1P82_RS22590	COG2050	protein possibly involved in aromatic compounds catabolism
C1P82_RS22595	COG2829	1-acyl-2-lysophosphatidylserine acylhydrolase activity
C1P82_RS22600	COG0514	ATP-dependent DNA helicase (RecQ)
C1P82_RS22605	COG1280	lysine exporter protein (LysE YggA)
C1P82_RS22610	COG1280	lysine exporter protein (LysE YggA)
C1P82_RS22615	COG2267	carboxylic ester hydrolase activity
C1P82_RS22620	COG0561	phosphatase activity
C1P82_RS22625	COG0697	spore germination
C1P82_RS22630	COG0583	DNA-binding transcription factor activity
C1P82_RS22640	COG0412	Dienelactone hydrolase
C1P82_RS22645	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
C1P82_RS22650	COG1322	Protein conserved in bacteria
C1P82_RS22660	COG3165	ubiquinone biosynthetic process from chorismate
C1P82_RS22670	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
C1P82_RS22675	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
C1P82_RS22680	COG0805	protein transport
C1P82_RS22700	COG0543	2 iron, 2 sulfur cluster binding
C1P82_RS22720	COG1739	Uncharacterized protein family UPF0029
C1P82_RS22725	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
C1P82_RS22730	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
C1P82_RS22755	COG1763	Mo-molybdopterin cofactor biosynthetic process
C1P82_RS22760	COG0746	molybdenum cofactor guanylyltransferase activity
C1P82_RS22765	COG3084	Protein conserved in bacteria
C1P82_RS22775	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
C1P82_RS22795	COG0204	Acyl-transferase
C1P82_RS22805	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C1P82_RS22805	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C1P82_RS22820	COG0635	Involved in the biosynthesis of porphyrin-containing compound
C1P82_RS22830	COG2204	response regulator
C1P82_RS22835	COG3852	Histidine kinase
C1P82_RS22845	COG0174	glutamine synthetase
C1P82_RS22850	COG1217	gtp-binding protein TYPA
C1P82_RS22860	COG2188	Transcriptional regulator
C1P82_RS22865	COG1082	Xylose isomerase domain protein TIM barrel
C1P82_RS22870	COG2271	Major facilitator Superfamily
C1P82_RS22875	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
C1P82_RS22880	COG2211	Major facilitator Superfamily
C1P82_RS22885	COG2211	Major facilitator Superfamily
C1P82_RS22890	COG1501	Belongs to the glycosyl hydrolase 31 family
C1P82_RS22895	COG2017	converts alpha-aldose to the beta-anomer
C1P82_RS22900	COG2942	2-epimerase
C1P82_RS22915	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C1P82_RS22920	COG1349	DNA-binding transcription factor activity
C1P82_RS22925	COG1011	Hydrolase
C1P82_RS23095	COG1475	DNA binding
C1P82_RS23100	COG3969	phosphoadenosine phosphosulfate
C1P82_RS23145	COG3436	PFAM IS66 Orf2 family protein
C1P82_RS23235	COG3385	transposase activity
C1P82_RS23265	COG0726	polysaccharide deacetylase
C1P82_RS23270	COG0297	glycogen (starch) synthase activity
C1P82_RS23275	COG2990	Protein conserved in bacteria
C1P82_RS23325	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
C1P82_RS23345	COG1525	nuclease
C1P82_RS23565	COG3385	transposase activity
C1P82_RS23575	COG3436	PFAM IS66 Orf2 family protein
C1P82_RS23700	COG3344	reverse transcriptase
C1P82_RS23765	COG3547	Transposase (IS116 IS110 IS902 family)
C1P82_RS23835	COG4372	Transposase