CDO28_RS00015 IPR000917 Sulfatase CDO28_RS00015 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CDO28_RS00015 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS00020 IPR003010 Carbon-nitrogen hydrolase CDO28_RS00020 IPR003694 NAD(+) synthetase CDO28_RS00020 IPR014445 Glutamine-dependent NAD(+) synthetase CDO28_RS00020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS00020 IPR022310 NAD/GMP synthase CDO28_RS00025 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS00025 IPR011659 WD40-like Beta Propeller CDO28_RS00030 IPR000843 Transcription regulator HTH, LacI CDO28_RS00030 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS00030 IPR025997 Periplasmic binding protein domain CDO28_RS00030 IPR028082 Periplasmic binding protein-like I CDO28_RS00035 IPR008775 Phytanoyl-CoA dioxygenase CDO28_RS00045 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS00045 IPR016040 NAD(P)-binding domain CDO28_RS00045 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS00050 IPR000415 Nitroreductase-like CDO28_RS00050 IPR012825 5,6-dimethylbenzimidazole synthase BluB CDO28_RS00050 IPR029479 Nitroreductase CDO28_RS00055 IPR021293 Protein of unknown function DUF2865 CDO28_RS00060 IPR001690 Autoinducer synthesis protein CDO28_RS00060 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS00065 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS00065 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CDO28_RS00065 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS00065 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS00070 IPR002505 Phosphate acetyl/butaryl transferase CDO28_RS00070 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase CDO28_RS00070 IPR012301 Malic enzyme, N-terminal domain CDO28_RS00070 IPR012302 Malic enzyme, NAD-binding CDO28_RS00070 IPR015884 Malic enzyme, conserved site CDO28_RS00070 IPR016040 NAD(P)-binding domain CDO28_RS00075 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CDO28_RS00075 IPR029052 Metallo-dependent phosphatase-like CDO28_RS00085 IPR020846 Major facilitator superfamily domain CDO28_RS00085 IPR024989 Major facilitator superfamily associated domain CDO28_RS00085 IPR026032 Phenylproprionate/maltose permease CDO28_RS00090 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDO28_RS00090 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDO28_RS00090 IPR029017 Enolase N-terminal domain-like CDO28_RS00090 IPR029065 Enolase C-terminal domain-like CDO28_RS00095 IPR003453 Permease domain CDO28_RS00095 IPR030802 CDO28_RS00095 CDO28_RS00100 IPR003439 ABC transporter-like CDO28_RS00100 IPR003593 AAA+ ATPase domain CDO28_RS00100 IPR017871 ABC transporter, conserved site CDO28_RS00100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS00105 IPR003399 Mammalian cell entry-related CDO28_RS00110 IPR005586 Protein of unknown function DUF330 CDO28_RS00115 IPR009057 Homeodomain-like CDO28_RS00115 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS00115 IPR014056 Addiction module killer protein, predicted CDO28_RS00115 IPR014057 Addiction module antidote protein, HI1420 CDO28_RS00120 IPR007055 BON domain CDO28_RS00125 IPR001260 Coproporphyrinogen III oxidase, aerobic CDO28_RS00125 IPR018375 Coproporphyrinogen III oxidase, conserved site CDO28_RS00135 IPR011701 Major facilitator superfamily CDO28_RS00135 IPR020846 Major facilitator superfamily domain CDO28_RS00140 IPR000551 MerR-type HTH domain CDO28_RS00140 IPR009061 DNA binding domain, putative CDO28_RS00140 IPR010211 Redox-sensitive transcriptional activator SoxR CDO28_RS00140 IPR015358 Transcription regulator MerR, DNA binding CDO28_RS00145 IPR005025 NADPH-dependent FMN reductase-like CDO28_RS00145 IPR029039 Flavoprotein-like CDO28_RS00150 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDO28_RS00150 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CDO28_RS00150 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDO28_RS00150 IPR029028 Alpha/beta knot methyltransferases CDO28_RS00155 IPR003439 ABC transporter-like CDO28_RS00155 IPR003593 AAA+ ATPase domain CDO28_RS00155 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS00155 IPR017871 ABC transporter, conserved site CDO28_RS00155 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS00160 IPR003439 ABC transporter-like CDO28_RS00160 IPR003593 AAA+ ATPase domain CDO28_RS00160 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS00160 IPR017871 ABC transporter, conserved site CDO28_RS00160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS00165 IPR005805 Rieske iron-sulphur protein, C-terminal CDO28_RS00165 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit CDO28_RS00165 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS00165 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal CDO28_RS00165 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDO28_RS00170 IPR005797 Cytochrome b/b6, N-terminal CDO28_RS00170 IPR005798 Cytochrome b/b6, C-terminal CDO28_RS00170 IPR016174 Di-haem cytochrome, transmembrane CDO28_RS00170 IPR027387 Cytochrome b/b6-like domain CDO28_RS00170 IPR030689 CDO28_RS00170 CDO28_RS00175 IPR002326 Cytochrome c1 CDO28_RS00175 IPR009056 Cytochrome c-like domain CDO28_RS00180 IPR000074 Apolipoprotein A1/A4/E CDO28_RS00185 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDO28_RS00195 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS00195 IPR001055 Adrenodoxin CDO28_RS00195 IPR012675 Beta-grasp domain CDO28_RS00195 IPR018298 Adrenodoxin, iron-sulphur binding site CDO28_RS00205 IPR010321 Protein of unknown function DUF922 CDO28_RS00210 IPR000489 Pterin-binding CDO28_RS00210 IPR006390 Dihydropteroate synthase CDO28_RS00210 IPR011005 Dihydropteroate synthase-like CDO28_RS00215 IPR006156 Dihydroneopterin aldolase CDO28_RS00215 IPR006157 Dihydroneopterin aldolase/epimerase domain CDO28_RS00220 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CDO28_RS00230 IPR006507 Uncharacterised protein family UPF0283 CDO28_RS00230 IPR021147 Protein of unknown function DUF697 CDO28_RS00235 IPR007413 Protein of unknown function DUF463, YcjX-like protein CDO28_RS00240 IPR013078 Histidine phosphatase superfamily, clade-1 CDO28_RS00240 IPR029033 Histidine phosphatase superfamily CDO28_RS00245 IPR000962 Zinc finger, DksA/TraR C4-type CDO28_RS00245 IPR012784 RNA polymerase-binding transcription factor DksA CDO28_RS00245 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CDO28_RS00250 IPR022781 Flagellar biosynthesis protein, FliO CDO28_RS00255 IPR000014 PAS domain CDO28_RS00255 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS00255 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS00255 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS00255 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS00255 IPR011006 CheY-like superfamily CDO28_RS00255 IPR013656 PAS fold-4 CDO28_RS00260 IPR007342 Pseudouridine-5'-phosphate glycosidase CDO28_RS00265 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CDO28_RS00265 IPR011611 Carbohydrate kinase PfkB CDO28_RS00265 IPR029056 Ribokinase-like CDO28_RS00270 IPR003593 AAA+ ATPase domain CDO28_RS00270 IPR013765 DNA recombination and repair protein RecA CDO28_RS00270 IPR020584 DNA recombination/repair protein RecA, conserved site CDO28_RS00270 IPR023400 DNA recombination and repair protein RecA, C-terminal CDO28_RS00270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS00275 IPR002318 Alanine-tRNA ligase, class IIc CDO28_RS00275 IPR003156 DHHA1 domain CDO28_RS00275 IPR009000 Translation protein, beta-barrel domain CDO28_RS00275 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CDO28_RS00275 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain CDO28_RS00275 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CDO28_RS00275 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CDO28_RS00275 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CDO28_RS00280 IPR002645 STAS domain CDO28_RS00280 IPR011547 Sulphate transporter CDO28_RS00285 IPR010621 Domain of unknown function DUF1214 CDO28_RS00285 IPR010679 Domain of unknown function DUF1254 CDO28_RS00285 IPR023289 VPA0735-like domain CDO28_RS00290 IPR010621 Domain of unknown function DUF1214 CDO28_RS00290 IPR010679 Domain of unknown function DUF1254 CDO28_RS00290 IPR023289 VPA0735-like domain CDO28_RS00295 IPR018958 SMI1/KNR4 like domain CDO28_RS00300 IPR003313 AraC-type arabinose-binding/dimerisation domain CDO28_RS00300 IPR009057 Homeodomain-like CDO28_RS00300 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS00300 IPR018062 HTH domain AraC-type, conserved site CDO28_RS00305 IPR004790 Isocitrate dehydrogenase NADP-dependent CDO28_RS00305 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CDO28_RS00305 IPR024084 Isopropylmalate dehydrogenase-like domain CDO28_RS00315 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDO28_RS00315 IPR004384 RNA methyltransferase TrmH, group 1 CDO28_RS00315 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDO28_RS00315 IPR029028 Alpha/beta knot methyltransferases CDO28_RS00320 IPR001920 Asp/Glu racemase CDO28_RS00320 IPR004391 Glutamate racemase CDO28_RS00320 IPR015942 Asp/Glu/hydantoin racemase CDO28_RS00320 IPR033134 CDO28_RS00320 CDO28_RS00325 IPR002789 Domain of unknown function DUF87 CDO28_RS00325 IPR003593 AAA+ ATPase domain CDO28_RS00325 IPR014588 ATPase, Atu1862 type, predicted CDO28_RS00325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS00330 IPR001912 Ribosomal protein S4/S9, N-terminal CDO28_RS00330 IPR002942 RNA-binding S4 domain CDO28_RS00330 IPR005709 Ribosomal protein S4, bacterial-type CDO28_RS00330 IPR018079 Ribosomal protein S4, conserved site CDO28_RS00335 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS00335 IPR015868 Glutaminase CDO28_RS00340 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CDO28_RS00340 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA CDO28_RS00340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS00345 IPR000760 Inositol monophosphatase CDO28_RS00350 IPR011701 Major facilitator superfamily CDO28_RS00350 IPR020846 Major facilitator superfamily domain CDO28_RS00355 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CDO28_RS00355 IPR011701 Major facilitator superfamily CDO28_RS00355 IPR020846 Major facilitator superfamily domain CDO28_RS00360 IPR002109 Glutaredoxin CDO28_RS00360 IPR004480 Monothiol glutaredoxin-related CDO28_RS00360 IPR012336 Thioredoxin-like fold CDO28_RS00360 IPR014434 Monothiol glutaredoxin CDO28_RS00370 IPR002634 BolA protein CDO28_RS00375 IPR010074 Phosphoribosylformylglycinamidine synthase II CDO28_RS00375 IPR010918 AIR synthase-related protein, C-terminal domain CDO28_RS00375 IPR016188 PurM, N-terminal-like CDO28_RS00380 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CDO28_RS00380 IPR018550 Lipid A 3-O-deacylase-related CDO28_RS00385 IPR000524 Transcription regulator HTH, GntR CDO28_RS00385 IPR004839 Aminotransferase, class I/classII CDO28_RS00385 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS00385 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS00385 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS00390 IPR009506 Protein of unknown function DUF1127 CDO28_RS00400 IPR010075 Phosphoribosylformylglycinamidine synthase I CDO28_RS00400 IPR029062 Class I glutamine amidotransferase-like CDO28_RS00405 IPR003850 Phosphoribosylformylglycinamidine synthetase, PurS subunit CDO28_RS00410 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CDO28_RS00410 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS00410 IPR018236 SAICAR synthetase, conserved site CDO28_RS00410 IPR028923 SAICAR synthetase/ADE2, N-terminal CDO28_RS00415 IPR009945 Protein of unknown function DUF1476 CDO28_RS00420 IPR007400 PrpF protein CDO28_RS00425 IPR009936 Protein of unknown function DUF1468 CDO28_RS00430 IPR005064 Bordetella uptake gene CDO28_RS00435 IPR002823 Protein of unknown function DUF112, transmembrane CDO28_RS00440 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS00440 IPR013328 Dehydrogenase, multihelical CDO28_RS00440 IPR015814 Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal CDO28_RS00440 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CDO28_RS00440 IPR016040 NAD(P)-binding domain CDO28_RS00440 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDO28_RS00445 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase CDO28_RS00445 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase CDO28_RS00450 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related CDO28_RS00450 IPR024078 Putative deacetylase LmbE-like domain CDO28_RS00455 IPR000847 Transcription regulator HTH, LysR CDO28_RS00455 IPR005119 LysR, substrate-binding CDO28_RS00455 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS00460 IPR010662 Putative hydrolase RBBP9/YdeN CDO28_RS00460 IPR029058 Alpha/Beta hydrolase fold CDO28_RS00465 IPR018692 Protein of unknown function DUF2189 CDO28_RS00470 IPR009875 PilZ domain CDO28_RS00480 IPR000362 Fumarate lyase family CDO28_RS00480 IPR004769 Adenylosuccinate lyase CDO28_RS00480 IPR008948 L-Aspartase-like CDO28_RS00480 IPR019468 Adenylosuccinate lyase C-terminal CDO28_RS00480 IPR020557 Fumarate lyase, conserved site CDO28_RS00480 IPR022761 Fumarate lyase, N-terminal CDO28_RS00480 IPR024083 Fumarase/histidase, N-terminal CDO28_RS00490 IPR018725 Protein of unknown function DUF2259, secreted CDO28_RS00495 IPR000056 Ribulose-phosphate 3-epimerase-like CDO28_RS00495 IPR011060 Ribulose-phosphate binding barrel CDO28_RS00495 IPR013785 Aldolase-type TIM barrel CDO28_RS00495 IPR026019 Ribulose-phosphate 3-epimerase CDO28_RS00500 IPR005321 Peptidase S58, DmpA CDO28_RS00500 IPR016117 ArgJ-like domain CDO28_RS00505 IPR028081 Leucine-binding protein domain CDO28_RS00505 IPR028082 Periplasmic binding protein-like I CDO28_RS00510 IPR002563 Flavin reductase-like, FMN-binding CDO28_RS00510 IPR012349 FMN-binding split barrel CDO28_RS00515 IPR011704 ATPase, dynein-related, AAA domain CDO28_RS00515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS00520 IPR002035 von Willebrand factor, type A CDO28_RS00520 IPR008912 Uncharacterised protein family CoxE-like CDO28_RS00520 IPR011195 Uncharacterised conserved protein UCP010256 CDO28_RS00525 IPR003777 XdhC- CoxI CDO28_RS00530 IPR027051 XdhC Rossmann domain CDO28_RS00535 IPR001453 Molybdopterin binding domain CDO28_RS00535 IPR012184 Bifunctional molybdopterin binding protein /nucleotidyl transferase, putative CDO28_RS00535 IPR025877 MobA-like NTP transferase domain CDO28_RS00535 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS00540 IPR007076 TfoX, N-terminal CDO28_RS00545 IPR000086 NUDIX hydrolase domain CDO28_RS00545 IPR015797 NUDIX hydrolase domain-like CDO28_RS00545 IPR020084 NUDIX hydrolase, conserved site CDO28_RS00550 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CDO28_RS00550 IPR001650 Helicase, C-terminal CDO28_RS00550 IPR011545 DEAD/DEAH box helicase domain CDO28_RS00550 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS00550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS00555 IPR011055 Duplicated hybrid motif CDO28_RS00555 IPR016047 Peptidase M23 CDO28_RS00560 IPR007402 Protein of unknown function DUF455 CDO28_RS00560 IPR009078 Ferritin-like superfamily CDO28_RS00560 IPR011197 Uncharacterised conserved protein UCP012318 CDO28_RS00560 IPR012347 Ferritin-related CDO28_RS00565 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDO28_RS00565 IPR012336 Thioredoxin-like fold CDO28_RS00565 IPR024706 Peroxiredoxin, AhpC-type CDO28_RS00570 IPR025263 Domain of unknown function DUF3971 CDO28_RS00570 IPR032712 CDO28_RS00570 CDO28_RS00575 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDO28_RS00575 IPR002305 Aminoacyl-tRNA synthetase, class Ic CDO28_RS00575 IPR002307 Tyrosine-tRNA ligase CDO28_RS00575 IPR002942 RNA-binding S4 domain CDO28_RS00575 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS00575 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 CDO28_RS00580 IPR005338 Anhydro-N-acetylmuramic acid kinase CDO28_RS00585 IPR007159 AbrB-like domain CDO28_RS00590 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain CDO28_RS00590 IPR029058 Alpha/Beta hydrolase fold CDO28_RS00595 IPR000192 Aminotransferase class V domain CDO28_RS00595 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS00595 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS00595 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS00595 IPR016454 Cysteine desulfurase, NifS CDO28_RS00600 IPR000825 SUF system FeS cluster assembly, SufBD CDO28_RS00600 IPR010231 SUF system FeS cluster assembly, SufB CDO28_RS00605 IPR003439 ABC transporter-like CDO28_RS00605 IPR003593 AAA+ ATPase domain CDO28_RS00605 IPR010230 FeS cluster assembly SUF system, ATPase SufC CDO28_RS00605 IPR017871 ABC transporter, conserved site CDO28_RS00605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS00610 IPR000825 SUF system FeS cluster assembly, SufBD CDO28_RS00610 IPR011542 SUF system FeS cluster assembly, SufD CDO28_RS00615 IPR000192 Aminotransferase class V domain CDO28_RS00615 IPR010970 Cysteine desulfurase, SufS CDO28_RS00615 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS00615 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS00615 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS00615 IPR016454 Cysteine desulfurase, NifS CDO28_RS00620 IPR002744 Domain of unknown function DUF59 CDO28_RS00620 IPR014291 SUF system FeS cluster assembly associated CDO28_RS00625 IPR000361 FeS cluster biogenesis CDO28_RS00625 IPR011298 SUF system FeS cluster assembly, SufA scaffold CDO28_RS00625 IPR016092 FeS cluster insertion protein CDO28_RS00630 IPR002559 Transposase, IS4-like CDO28_RS00630 IPR012337 Ribonuclease H-like domain CDO28_RS00630 IPR014736 Transposase, Tn5-like, core CDO28_RS00630 IPR025399 Domain of unknown function DUF4372 CDO28_RS00635 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS00635 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS00635 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS00640 IPR001405 RadC protein CDO28_RS00640 IPR010994 RuvA domain 2-like CDO28_RS00640 IPR020891 Uncharacterised protein family UPF0758, conserved site CDO28_RS00640 IPR025657 RadC-like JAB domain CDO28_RS00645 IPR000994 Peptidase M24, structural domain CDO28_RS00645 IPR001714 Peptidase M24, methionine aminopeptidase CDO28_RS00645 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CDO28_RS00650 IPR005224 Sugar fermentation stimulation protein CDO28_RS00655 IPR010941 Poly-beta-hydroxybutyrate polymerase, central domain CDO28_RS00655 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I CDO28_RS00655 IPR029058 Alpha/Beta hydrolase fold CDO28_RS00665 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDO28_RS00665 IPR004839 Aminotransferase, class I/classII CDO28_RS00665 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS00665 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS00665 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS00670 IPR001342 Homoserine dehydrogenase, catalytic CDO28_RS00670 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CDO28_RS00670 IPR016040 NAD(P)-binding domain CDO28_RS00670 IPR016204 Homoserine dehydrogenase CDO28_RS00670 IPR019811 Homoserine dehydrogenase, conserved site CDO28_RS00675 IPR001667 DDH domain CDO28_RS00675 IPR003156 DHHA1 domain CDO28_RS00675 IPR004610 Bacterial RecJ exonuclease CDO28_RS00700 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CDO28_RS00700 IPR013230 Peptidase M15A, C-terminal CDO28_RS00705 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS00705 IPR018146 Glyoxalase I, conserved site CDO28_RS00705 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS00710 IPR002059 Cold-shock protein, DNA-binding CDO28_RS00710 IPR011129 Cold shock protein CDO28_RS00710 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS00715 IPR003795 Protein of unknown function DUF192 CDO28_RS00725 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial CDO28_RS00735 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS00735 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS00735 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS00740 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDO28_RS00755 IPR000847 Transcription regulator HTH, LysR CDO28_RS00755 IPR005119 LysR, substrate-binding CDO28_RS00755 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS00760 IPR010323 Protein of unknown function DUF924 CDO28_RS00760 IPR011990 Tetratricopeptide-like helical domain CDO28_RS00770 IPR027843 Domain of unknown function DUF4440 CDO28_RS00770 IPR032710 CDO28_RS00770 CDO28_RS00795 IPR000485 AsnC-type HTH domain CDO28_RS00795 IPR011008 Dimeric alpha-beta barrel CDO28_RS00795 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS00795 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDO28_RS00795 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS00795 IPR019888 Transcription regulator AsnC-type CDO28_RS00800 IPR000192 Aminotransferase class V domain CDO28_RS00800 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS00800 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS00800 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS00805 IPR001279 Beta-lactamase-like CDO28_RS00820 IPR000847 Transcription regulator HTH, LysR CDO28_RS00820 IPR005119 LysR, substrate-binding CDO28_RS00820 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS00825 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CDO28_RS00825 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDO28_RS00825 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS00825 IPR013328 Dehydrogenase, multihelical CDO28_RS00825 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CDO28_RS00825 IPR016040 NAD(P)-binding domain CDO28_RS00825 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDO28_RS00830 IPR004681 TRAP transporter permease protein CDO28_RS00830 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS00835 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS00840 IPR004682 TRAP dicarboxylate transporter CDO28_RS00840 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS00845 IPR005474 Transketolase, N-terminal CDO28_RS00845 IPR029061 Thiamin diphosphate-binding fold CDO28_RS00850 IPR005475 Transketolase-like, pyrimidine-binding domain CDO28_RS00850 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CDO28_RS00850 IPR029061 Thiamin diphosphate-binding fold CDO28_RS00850 IPR033248 CDO28_RS00850 CDO28_RS00855 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS00855 IPR016040 NAD(P)-binding domain CDO28_RS00855 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS00865 IPR004681 TRAP transporter permease protein CDO28_RS00865 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS00865 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS00870 IPR004682 TRAP dicarboxylate transporter CDO28_RS00870 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS00875 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS00875 IPR016040 NAD(P)-binding domain CDO28_RS00880 IPR005471 Transcription regulator IclR, N-terminal CDO28_RS00880 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS00880 IPR014757 Transcription regulator IclR, C-terminal CDO28_RS00880 IPR029016 GAF domain-like CDO28_RS00885 IPR002155 Thiolase CDO28_RS00885 IPR016039 Thiolase-like CDO28_RS00885 IPR020616 Thiolase, N-terminal CDO28_RS00885 IPR020617 Thiolase, C-terminal CDO28_RS00890 IPR000873 AMP-dependent synthetase/ligase CDO28_RS00890 IPR020845 AMP-binding, conserved site CDO28_RS00890 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS00895 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS00895 IPR016040 NAD(P)-binding domain CDO28_RS00895 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS00900 IPR005175 Domain of unknown function DUF296 CDO28_RS00910 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CDO28_RS00910 IPR027385 Outer membrane protein beta-barrel CDO28_RS00915 IPR002818 ThiJ/PfpI CDO28_RS00915 IPR009057 Homeodomain-like CDO28_RS00915 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS00915 IPR018062 HTH domain AraC-type, conserved site CDO28_RS00915 IPR029062 Class I glutamine amidotransferase-like CDO28_RS00930 IPR009642 Protein of unknown function DUF1236 CDO28_RS00935 IPR009642 Protein of unknown function DUF1236 CDO28_RS00975 IPR003834 Cytochrome c assembly protein, transmembrane domain CDO28_RS00980 IPR004776 Auxin efflux carrier CDO28_RS00985 IPR002938 Monooxygenase, FAD-binding CDO28_RS00985 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 CDO28_RS00985 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS00995 IPR000462 CDP-alcohol phosphatidyltransferase CDO28_RS00995 IPR026027 Phosphatidylcholine synthase Pcs CDO28_RS01000 IPR011032 GroES (chaperonin 10)-like CDO28_RS01000 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS01000 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS01000 IPR016040 NAD(P)-binding domain CDO28_RS01000 IPR020843 Polyketide synthase, enoylreductase CDO28_RS01005 IPR003439 ABC transporter-like CDO28_RS01005 IPR003593 AAA+ ATPase domain CDO28_RS01005 IPR017871 ABC transporter, conserved site CDO28_RS01005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS01010 IPR001851 ABC transporter, permease CDO28_RS01015 IPR001851 ABC transporter, permease CDO28_RS01020 IPR003760 Basic membrane lipoprotein CDO28_RS01025 IPR000524 Transcription regulator HTH, GntR CDO28_RS01025 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS01025 IPR011711 GntR, C-terminal CDO28_RS01025 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS01030 IPR000644 CBS domain CDO28_RS01030 IPR002550 Domain of unknown function DUF21 CDO28_RS01030 IPR005170 Transporter-associated domain CDO28_RS01030 IPR016166 FAD-binding, type 2 CDO28_RS01030 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS01040 IPR001453 Molybdopterin binding domain CDO28_RS01040 IPR005110 MoeA, N-terminal and linker domain CDO28_RS01040 IPR005111 MoeA, C-terminal, domain IV CDO28_RS01040 IPR008284 Molybdenum cofactor biosynthesis, conserved site CDO28_RS01045 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CDO28_RS01045 IPR023045 Molybdenum cofactor biosynthesis C CDO28_RS01045 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type CDO28_RS01050 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CDO28_RS01050 IPR011060 Ribulose-phosphate binding barrel CDO28_RS01050 IPR013785 Aldolase-type TIM barrel CDO28_RS01050 IPR013798 Indole-3-glycerol phosphate synthase CDO28_RS01055 IPR000312 Glycosyl transferase, family 3 CDO28_RS01055 IPR005940 Anthranilate phosphoribosyl transferase CDO28_RS01055 IPR017459 Glycosyl transferase family 3, N-terminal domain CDO28_RS01060 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CDO28_RS01060 IPR027304 Trigger factor/SurA domain CDO28_RS01065 IPR003841 Sodium-dependent phosphate transport protein CDO28_RS01065 IPR026022 PhoU domain CDO28_RS01070 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS01070 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CDO28_RS01070 IPR011004 Trimeric LpxA-like CDO28_RS01070 IPR018357 Hexapeptide transferase, conserved site CDO28_RS01070 IPR025877 MobA-like NTP transferase domain CDO28_RS01070 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS01075 IPR001347 Sugar isomerase (SIS) CDO28_RS01075 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CDO28_RS01075 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS01080 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS01085 IPR007462 Protein of unknown function DUF502 CDO28_RS01090 IPR001650 Helicase, C-terminal CDO28_RS01090 IPR004609 ATP-dependent DNA helicase RecG CDO28_RS01090 IPR011545 DEAD/DEAH box helicase domain CDO28_RS01090 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS01090 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS01090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS01090 IPR033454 CDO28_RS01090 CDO28_RS01095 IPR005631 Flavinator of succinate dehydrogenase CDO28_RS01100 IPR001650 Helicase, C-terminal CDO28_RS01100 IPR003711 CarD-like/TRCF domain CDO28_RS01100 IPR004576 Transcription-repair coupling factor CDO28_RS01100 IPR005118 Transcription-repair-coupling factor, C-terminal domain CDO28_RS01100 IPR011545 DEAD/DEAH box helicase domain CDO28_RS01100 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS01100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS01115 IPR004808 AP endonuclease 1 CDO28_RS01115 IPR005135 Endonuclease/exonuclease/phosphatase CDO28_RS01115 IPR020847 AP endonuclease 1, binding site CDO28_RS01130 IPR010297 Protein of unknown function DUF900, hydrolase-like CDO28_RS01130 IPR014586 Uncharacterised conserved protein UCP033909 CDO28_RS01130 IPR029058 Alpha/Beta hydrolase fold CDO28_RS01135 IPR000917 Sulfatase CDO28_RS01135 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CDO28_RS01135 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS01135 IPR024607 Sulfatase, conserved site CDO28_RS01140 IPR009057 Homeodomain-like CDO28_RS01140 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS01140 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS01140 IPR032687 CDO28_RS01140 CDO28_RS01145 IPR001853 DSBA-like thioredoxin domain CDO28_RS01145 IPR012336 Thioredoxin-like fold CDO28_RS01150 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS01150 IPR030678 CDO28_RS01150 CDO28_RS01155 IPR010642 Invasion protein B CDO28_RS01160 IPR011722 Hemimethylated DNA-binding domain CDO28_RS01165 IPR001637 Glutamine synthetase class-I, adenylation site CDO28_RS01165 IPR004809 Glutamine synthetase type I CDO28_RS01165 IPR008146 Glutamine synthetase, catalytic domain CDO28_RS01165 IPR008147 Glutamine synthetase, beta-Grasp CDO28_RS01165 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDO28_RS01165 IPR027302 Glutamine synthetase, N-terminal conserved site CDO28_RS01165 IPR027303 Glutamine synthetase, glycine-rich site CDO28_RS01170 IPR002187 Nitrogen regulatory protein PII CDO28_RS01170 IPR002332 Nitrogen regulatory protein P-II, urydylation site CDO28_RS01170 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDO28_RS01170 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDO28_RS01170 IPR017918 Nitrogen regulatory protein PII, conserved site CDO28_RS01175 IPR000631 YjeF C-terminal domain CDO28_RS01175 IPR004443 YjeF N-terminal domain CDO28_RS01175 IPR017953 Carbohydrate kinase, predicted, conserved site CDO28_RS01175 IPR029056 Ribokinase-like CDO28_RS01175 IPR030677 CDO28_RS01175 CDO28_RS01180 IPR000836 Phosphoribosyltransferase domain CDO28_RS01180 IPR023747 Xanthine-guanine phosphoribosyltransferase CDO28_RS01180 IPR029057 Phosphoribosyltransferase-like CDO28_RS01185 IPR001453 Molybdopterin binding domain CDO28_RS01190 IPR005025 NADPH-dependent FMN reductase-like CDO28_RS01190 IPR010089 Flavoprotein WrbA CDO28_RS01190 IPR029039 Flavoprotein-like CDO28_RS01195 IPR018691 Protein of unknown function DUF2188 CDO28_RS01215 IPR005545 YCII-related CDO28_RS01215 IPR011008 Dimeric alpha-beta barrel CDO28_RS01220 IPR002104 Integrase, catalytic CDO28_RS01220 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS01220 IPR013762 Integrase-like, catalytic core CDO28_RS01220 IPR023109 Integrase/recombinase, N-terminal CDO28_RS01240 IPR010373 Protein of unknown function DUF968 CDO28_RS01255 IPR011101 Burkholderia phage phiE125, Gp37 CDO28_RS01265 IPR010183 Bacteriophage lambda, Bet CDO28_RS01265 IPR018330 RecT family CDO28_RS01270 IPR008840 Siphovirus Gp157 CDO28_RS01305 IPR021284 Protein of unknown function DUF2750 CDO28_RS01310 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS01310 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS01310 IPR015927 Peptidase S24/S26A/S26B/S26C CDO28_RS01310 IPR019759 Peptidase S24/S26A/S26B CDO28_RS01310 IPR028360 Peptidase S24/S26, beta-ribbon domain CDO28_RS01315 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS01330 IPR018753 Azospirillum phage Cd, Gp10 CDO28_RS01350 IPR001525 C-5 cytosine methyltransferase CDO28_RS01350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS01360 IPR001091 Restriction/modification DNA-methylase CDO28_RS01360 IPR002941 DNA methylase N-4/N-6 CDO28_RS01360 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site CDO28_RS01360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS01370 IPR011856 tRNA endonuclease-like domain CDO28_RS01375 IPR002500 Phosphoadenosine phosphosulphate reductase CDO28_RS01375 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS01380 IPR010781 Protein of unknown function DUF1376 CDO28_RS01390 IPR009057 Homeodomain-like CDO28_RS01390 IPR011681 GcrA cell cycle regulator CDO28_RS01395 IPR006645 NusG, N-terminal CDO28_RS01410 IPR028964 Immunity protein 47 CDO28_RS01415 IPR007047 Flp/Fap pilin component CDO28_RS01450 IPR018738 Protein of unknown function DUF2280 CDO28_RS01455 IPR006437 Bacteriophage terminase, large subunit CDO28_RS01460 IPR006445 Phage-associated protein HI1409 CDO28_RS01460 IPR024459 Protein of unknown function DUF1073 CDO28_RS01470 IPR016913 Uncharacterised conserved protein UCP029215 CDO28_RS01480 IPR020049 Protein of unknown function DUF2184 CDO28_RS01520 IPR006528 Phage head morphogenesis domain CDO28_RS01535 IPR025395 Protein of unknown function DUF4128 CDO28_RS01540 IPR014918 Bacteriophage T1, Orf41 CDO28_RS01555 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal CDO28_RS01585 IPR003961 Fibronectin, type III CDO28_RS01585 IPR013783 Immunoglobulin-like fold CDO28_RS01590 IPR013830 CDO28_RS01590 CDO28_RS01605 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS01620 IPR002477 Peptidoglycan binding-like CDO28_RS01620 IPR023346 Lysozyme-like domain CDO28_RS01670 IPR012309 DNA ligase, ATP-dependent, C-terminal CDO28_RS01670 IPR012310 DNA ligase, ATP-dependent, central CDO28_RS01670 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS01670 IPR014146 DNA polymerase LigD, ligase domain CDO28_RS01690 IPR003445 Cation transporter CDO28_RS01690 IPR004772 Potassium uptake protein TrkH family CDO28_RS01695 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CDO28_RS01695 IPR001721 ACT-like domain CDO28_RS01695 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDO28_RS01695 IPR011820 L-threonine dehydratase biosynthetic IlvA CDO28_RS01700 IPR018772 Transcription activator HlyU CDO28_RS01705 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS01705 IPR006146 5'-Nucleotidase, conserved site CDO28_RS01705 IPR006179 5'-Nucleotidase/apyrase CDO28_RS01705 IPR008334 5'-Nucleotidase, C-terminal CDO28_RS01705 IPR029052 Metallo-dependent phosphatase-like CDO28_RS01710 IPR000485 AsnC-type HTH domain CDO28_RS01710 IPR011008 Dimeric alpha-beta barrel CDO28_RS01710 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS01710 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDO28_RS01710 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS01710 IPR019888 Transcription regulator AsnC-type CDO28_RS01715 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDO28_RS01715 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDO28_RS01715 IPR008141 Alanine dehydrogenase CDO28_RS01715 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CDO28_RS01715 IPR016040 NAD(P)-binding domain CDO28_RS01715 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS01720 IPR009593 Protein of unknown function DUF1203 CDO28_RS01725 IPR000182 GNAT domain CDO28_RS01725 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS01730 IPR001307 Thiosulphate sulfurtransferase, conserved site CDO28_RS01730 IPR001763 Rhodanese-like domain CDO28_RS01735 IPR009000 Translation protein, beta-barrel domain CDO28_RS01735 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CDO28_RS01735 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CDO28_RS01735 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CDO28_RS01740 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CDO28_RS01740 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDO28_RS01745 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS01745 IPR016040 NAD(P)-binding domain CDO28_RS01750 IPR007159 AbrB-like domain CDO28_RS01755 IPR002716 PIN domain CDO28_RS01755 IPR029060 PIN domain-like CDO28_RS01760 IPR000390 Small multidrug resistance protein family CDO28_RS01765 IPR000390 Small multidrug resistance protein family CDO28_RS01775 IPR003615 HNH nuclease CDO28_RS01785 IPR001001 DNA polymerase III, beta chain CDO28_RS01785 IPR022634 DNA polymerase III, beta chain, N-terminal CDO28_RS01785 IPR022635 DNA polymerase III, beta chain, C-terminal CDO28_RS01785 IPR022637 DNA polymerase III, beta chain, central CDO28_RS01820 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS01820 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS01820 IPR015927 Peptidase S24/S26A/S26B/S26C CDO28_RS01820 IPR019759 Peptidase S24/S26A/S26B CDO28_RS01820 IPR028360 Peptidase S24/S26, beta-ribbon domain CDO28_RS01845 IPR003115 ParB/Sulfiredoxin CDO28_RS01850 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CDO28_RS01850 IPR018753 Azospirillum phage Cd, Gp10 CDO28_RS01855 IPR003115 ParB/Sulfiredoxin CDO28_RS01855 IPR007757 MT-A70-like CDO28_RS01855 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS01870 IPR006645 NusG, N-terminal CDO28_RS01870 IPR014722 Ribosomal protein L2 domain 2 CDO28_RS01875 IPR002711 HNH endonuclease CDO28_RS01875 IPR003615 HNH nuclease CDO28_RS01885 IPR005021 Phage terminase CDO28_RS01895 IPR006427 Phage portal protein, HK97 CDO28_RS01895 IPR006944 Bacteriophage/Gene transfer agent portal protein CDO28_RS01900 IPR002142 Peptidase S49 CDO28_RS01900 IPR029045 ClpP/crotonase-like domain CDO28_RS01905 IPR006444 Phage major capsid protein, HK97 CDO28_RS01905 IPR024455 Phage capsid CDO28_RS01935 IPR025395 Protein of unknown function DUF4128 CDO28_RS01960 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal CDO28_RS01970 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal CDO28_RS01990 IPR030392 CDO28_RS01990 CDO28_RS01995 IPR008565 Protein of unknown function DUF847 CDO28_RS01995 IPR018537 Peptidoglycan binding domain CDO28_RS01995 IPR023346 Lysozyme-like domain CDO28_RS02035 IPR012309 DNA ligase, ATP-dependent, C-terminal CDO28_RS02035 IPR012310 DNA ligase, ATP-dependent, central CDO28_RS02035 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS02035 IPR014146 DNA polymerase LigD, ligase domain CDO28_RS02040 IPR017601 DGQHR-containing domain CDO28_RS02040 IPR017642 DNA sulphur modification protein DndB CDO28_RS02050 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDO28_RS02050 IPR012263 Adenine modification methylase, M.EcoRV-type CDO28_RS02050 IPR012327 D12 class N6 adenine-specific DNA methyltransferase CDO28_RS02050 IPR023095 Adenine-specific methyltransferase, domain 2 CDO28_RS02050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS02055 IPR002104 Integrase, catalytic CDO28_RS02055 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS02055 IPR013762 Integrase-like, catalytic core CDO28_RS02075 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS02075 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS02085 IPR006197 Peptidase S24, LexA-like CDO28_RS02085 IPR006199 LexA repressor, DNA-binding domain CDO28_RS02085 IPR006200 LexA repressor CDO28_RS02085 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS02085 IPR015927 Peptidase S24/S26A/S26B/S26C CDO28_RS02085 IPR019759 Peptidase S24/S26A/S26B CDO28_RS02085 IPR028360 Peptidase S24/S26, beta-ribbon domain CDO28_RS02100 IPR010621 Domain of unknown function DUF1214 CDO28_RS02100 IPR010679 Domain of unknown function DUF1254 CDO28_RS02105 IPR010621 Domain of unknown function DUF1214 CDO28_RS02105 IPR010679 Domain of unknown function DUF1254 CDO28_RS02105 IPR023289 VPA0735-like domain CDO28_RS02125 IPR009009 RlpA-like double-psi beta-barrel domain CDO28_RS02125 IPR012997 Rare lipoprotein A, bacterial CDO28_RS02130 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CDO28_RS02130 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS02130 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CDO28_RS02130 IPR015956 Penicillin-binding protein-associated CDO28_RS02130 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CDO28_RS02135 IPR018094 Thymidylate kinase CDO28_RS02135 IPR018095 Thymidylate kinase, conserved site CDO28_RS02135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS02140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS02145 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CDO28_RS02145 IPR011315 NTP pyrophosphohydrolase MazG-related, Rhizobiaceae-type CDO28_RS02150 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDO28_RS02150 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CDO28_RS02150 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CDO28_RS02150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS02150 IPR014758 Methionyl-tRNA synthetase CDO28_RS02150 IPR015413 Methionyl/Leucyl tRNA synthetase CDO28_RS02150 IPR023457 Methionine-tRNA synthetase, type 2 CDO28_RS02155 IPR001130 TatD family CDO28_RS02155 IPR015991 Uncharacterised deoxyribonuclease TatD-type CDO28_RS02155 IPR018228 Deoxyribonuclease, TatD-related, conserved site CDO28_RS02155 IPR032466 CDO28_RS02155 CDO28_RS02160 IPR001279 Beta-lactamase-like CDO28_RS02165 IPR001584 Integrase, catalytic core CDO28_RS02165 IPR009057 Homeodomain-like CDO28_RS02165 IPR012337 Ribonuclease H-like domain CDO28_RS02170 IPR009057 Homeodomain-like CDO28_RS02170 IPR025246 Transposase IS30-like HTH domain CDO28_RS02185 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS02185 IPR011057 Mss4-like CDO28_RS02190 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS02190 IPR007195 TolB, N-terminal CDO28_RS02190 IPR011990 Tetratricopeptide-like helical domain CDO28_RS02190 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS02190 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS02190 IPR019734 Tetratricopeptide repeat CDO28_RS02200 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG CDO28_RS02200 IPR011701 Major facilitator superfamily CDO28_RS02200 IPR020846 Major facilitator superfamily domain CDO28_RS02205 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS02205 IPR016040 NAD(P)-binding domain CDO28_RS02205 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS02210 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS02225 IPR007269 Isoprenylcysteine carboxyl methyltransferase CDO28_RS02230 IPR023213 Chloramphenicol acetyltransferase-like domain CDO28_RS02235 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS02235 IPR004027 SEC-C motif CDO28_RS02235 IPR016040 NAD(P)-binding domain CDO28_RS02235 IPR032710 CDO28_RS02235 CDO28_RS02240 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS02240 IPR018313 Extracellular solute-binding protein, family 3, conserved site CDO28_RS02245 IPR002616 tRNA-guanine(15) transglycosylase-like CDO28_RS02245 IPR004803 Queuine tRNA-ribosyltransferase CDO28_RS02250 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CDO28_RS02255 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CDO28_RS02255 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CDO28_RS02255 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CDO28_RS02255 IPR029000 Cyclophilin-like domain CDO28_RS02260 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CDO28_RS02260 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CDO28_RS02260 IPR029000 Cyclophilin-like domain CDO28_RS02265 IPR001980 Coenzyme A biosynthesis protein CDO28_RS02265 IPR004821 Cytidyltransferase-like domain CDO28_RS02265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS02280 IPR002528 Multi antimicrobial extrusion protein CDO28_RS02285 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG CDO28_RS02285 IPR005829 Sugar transporter, conserved site CDO28_RS02285 IPR011701 Major facilitator superfamily CDO28_RS02285 IPR020846 Major facilitator superfamily domain CDO28_RS02290 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CDO28_RS02295 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS02295 IPR011032 GroES (chaperonin 10)-like CDO28_RS02295 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS02295 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS02295 IPR016040 NAD(P)-binding domain CDO28_RS02295 IPR020843 Polyketide synthase, enoylreductase CDO28_RS02300 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDO28_RS02300 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CDO28_RS02300 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CDO28_RS02300 IPR006275 Carbamoyl-phosphate synthase, large subunit CDO28_RS02300 IPR011607 Methylglyoxal synthase-like domain CDO28_RS02300 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS02300 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS02300 IPR016185 Pre-ATP-grasp domain CDO28_RS02310 IPR011701 Major facilitator superfamily CDO28_RS02310 IPR020846 Major facilitator superfamily domain CDO28_RS02315 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CDO28_RS02315 IPR006359 Transcription elongation factor GreA CDO28_RS02315 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CDO28_RS02315 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CDO28_RS02315 IPR023459 Transcription elongation factor GreA/GreB family CDO28_RS02315 IPR028624 Transcription elongation factor GreA/GreB CDO28_RS02320 IPR001296 Glycosyl transferase, family 1 CDO28_RS02325 IPR001296 Glycosyl transferase, family 1 CDO28_RS02325 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS02330 IPR001296 Glycosyl transferase, family 1 CDO28_RS02330 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS02335 IPR001173 Glycosyltransferase 2-like CDO28_RS02335 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS02340 IPR000485 AsnC-type HTH domain CDO28_RS02340 IPR011008 Dimeric alpha-beta barrel CDO28_RS02340 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS02340 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDO28_RS02340 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS02340 IPR019888 Transcription regulator AsnC-type CDO28_RS02345 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CDO28_RS02345 IPR005982 Thioredoxin reductase CDO28_RS02345 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CDO28_RS02345 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS02350 IPR000847 Transcription regulator HTH, LysR CDO28_RS02350 IPR005119 LysR, substrate-binding CDO28_RS02350 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS02355 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS02355 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS02360 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDO28_RS02360 IPR013785 Aldolase-type TIM barrel CDO28_RS02365 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase CDO28_RS02365 IPR011009 Protein kinase-like domain CDO28_RS02375 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS02380 IPR008258 Lytic transglycosylase-like SLT domain CDO28_RS02380 IPR023346 Lysozyme-like domain CDO28_RS02390 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CDO28_RS02390 IPR005743 DNA gyrase, subunit A CDO28_RS02390 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel CDO28_RS02390 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain CDO28_RS02390 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CDO28_RS02390 IPR013760 DNA topoisomerase, type IIA-like domain CDO28_RS02390 IPR024946 Arginine repressor C-terminal-like domain CDO28_RS02395 IPR002771 Multiple antibiotic resistance (MarC)-related CDO28_RS02400 IPR000424 Primosome PriB/single-strand DNA-binding CDO28_RS02400 IPR011344 Single-stranded DNA-binding protein CDO28_RS02400 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS02405 IPR003439 ABC transporter-like CDO28_RS02405 IPR004602 UvrABC system subunit A CDO28_RS02405 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS02405 IPR017871 ABC transporter, conserved site CDO28_RS02405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS02410 IPR002763 Protein of unknown function DUF72 CDO28_RS02415 IPR000788 Ribonucleotide reductase large subunit, C-terminal CDO28_RS02415 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent CDO28_RS02415 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain CDO28_RS02415 IPR017856 Integrase, N-terminal zinc-binding domain-like CDO28_RS02415 IPR029072 YebC-like CDO28_RS02430 IPR000594 UBA/THIF-type NAD/FAD binding fold CDO28_RS02430 IPR016040 NAD(P)-binding domain CDO28_RS02435 IPR028090 JAB domain, prokaryotic CDO28_RS02445 IPR025202 Phospholipase D-like domain CDO28_RS02455 IPR001650 Helicase, C-terminal CDO28_RS02455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS02465 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDO28_RS02465 IPR003356 DNA methylase, adenine-specific CDO28_RS02465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS02475 IPR003615 HNH nuclease CDO28_RS02480 IPR001279 Beta-lactamase-like CDO28_RS02490 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CDO28_RS02505 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS02510 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CDO28_RS02525 IPR008613 Excalibur calcium-binding domain CDO28_RS02530 IPR003646 SH3-like domain, bacterial-type CDO28_RS02530 IPR010466 Protein of unknown function DUF1058 CDO28_RS02530 IPR029045 ClpP/crotonase-like domain CDO28_RS02535 IPR001650 Helicase, C-terminal CDO28_RS02535 IPR003615 HNH nuclease CDO28_RS02535 IPR004589 DNA helicase, ATP-dependent, RecQ type CDO28_RS02535 IPR011545 DEAD/DEAH box helicase domain CDO28_RS02535 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS02535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS02535 IPR029471 HNH endonuclease 5 CDO28_RS02545 IPR000642 Peptidase M41 CDO28_RS02545 IPR003593 AAA+ ATPase domain CDO28_RS02545 IPR003959 ATPase, AAA-type, core CDO28_RS02545 IPR003960 ATPase, AAA-type, conserved site CDO28_RS02545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS02555 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDO28_RS02560 IPR002716 PIN domain CDO28_RS02560 IPR029060 PIN domain-like CDO28_RS02575 IPR001584 Integrase, catalytic core CDO28_RS02575 IPR012337 Ribonuclease H-like domain CDO28_RS02580 IPR003593 AAA+ ATPase domain CDO28_RS02580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS02590 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS02590 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS02590 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS02590 IPR012336 Thioredoxin-like fold CDO28_RS02605 IPR007410 DR1885-like metal-binding protein CDO28_RS02605 IPR012533 GLE1, N-terminal, bacteria CDO28_RS02605 IPR021174 Uncharacterised conserved protein UCP037139 CDO28_RS02615 IPR006222 Glycine cleavage T-protein, N-terminal CDO28_RS02615 IPR006223 Glycine cleavage system T protein CDO28_RS02615 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDO28_RS02615 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDO28_RS02615 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA CDO28_RS02615 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CDO28_RS02620 IPR002930 Glycine cleavage system H-protein CDO28_RS02620 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDO28_RS02620 IPR011053 Single hybrid motif CDO28_RS02620 IPR017453 Glycine cleavage system H-protein, subgroup CDO28_RS02625 IPR003437 Glycine cleavage system P protein, homodimeric CDO28_RS02625 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS02625 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS02625 IPR020580 Glycine cleavage system P-protein, N-terminal CDO28_RS02630 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CDO28_RS02630 IPR005215 Trigger factor CDO28_RS02630 IPR008880 Trigger factor, C-terminal domain CDO28_RS02630 IPR008881 Trigger factor, ribosome-binding, bacterial CDO28_RS02630 IPR027304 Trigger factor/SurA domain CDO28_RS02640 IPR009506 Protein of unknown function DUF1127 CDO28_RS02645 IPR009506 Protein of unknown function DUF1127 CDO28_RS02650 IPR002218 Glucose-inhibited division protein A-related CDO28_RS02650 IPR004417 Folate-dependent ribothymidyl synthase CDO28_RS02650 IPR020595 Glucose-inhibited division protein A-related, conserved site CDO28_RS02650 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS02660 IPR002060 Squalene/phytoene synthase CDO28_RS02660 IPR008949 Terpenoid synthase CDO28_RS02665 IPR007523 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 CDO28_RS02670 IPR005665 Protein-export membrane protein SecF, bacterial CDO28_RS02670 IPR005791 Protein translocase subunit SecD CDO28_RS02670 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDO28_RS02670 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDO28_RS02670 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDO28_RS02675 IPR003849 Preprotein translocase YajC CDO28_RS02680 IPR008533 Domain of unknown function DUF815 CDO28_RS02680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS02685 IPR011055 Duplicated hybrid motif CDO28_RS02685 IPR016047 Peptidase M23 CDO28_RS02685 IPR018392 LysM domain CDO28_RS02695 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CDO28_RS02695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS02700 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CDO28_RS02700 IPR030048 CDO28_RS02700 CDO28_RS02705 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CDO28_RS02705 IPR002317 Serine-tRNA ligase, type1 CDO28_RS02705 IPR010978 tRNA-binding arm CDO28_RS02705 IPR015866 Serine-tRNA synthetase, type1, N-terminal CDO28_RS02710 IPR002033 Sec-independent periplasmic protein translocase TatC CDO28_RS02710 IPR019820 Sec-independent periplasmic protein translocase, conserved site CDO28_RS02715 IPR003369 Sec-independent protein translocase protein TatA/B/E CDO28_RS02715 IPR003998 Twin-arginine translocation protein TatB-like CDO28_RS02715 IPR018448 Twin-arginine translocation protein TatB CDO28_RS02720 IPR003369 Sec-independent protein translocase protein TatA/B/E CDO28_RS02720 IPR006312 Sec-independent protein translocase protein TatA/E CDO28_RS02725 IPR003439 ABC transporter-like CDO28_RS02725 IPR003593 AAA+ ATPase domain CDO28_RS02725 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS02725 IPR017871 ABC transporter, conserved site CDO28_RS02725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS02730 IPR005234 Chromosome segregation/condensation protein ScpB CDO28_RS02730 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS02735 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA CDO28_RS02740 IPR001764 Glycoside hydrolase, family 3, N-terminal CDO28_RS02740 IPR017853 Glycoside hydrolase, superfamily CDO28_RS02745 IPR007730 Sporulation-related domain CDO28_RS02750 IPR001278 Arginine-tRNA ligase CDO28_RS02750 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDO28_RS02750 IPR005148 Arginyl tRNA synthetase N-terminal domain CDO28_RS02750 IPR008909 DALR anticodon binding CDO28_RS02750 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CDO28_RS02750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS02755 IPR003607 HD/PDEase domain CDO28_RS02755 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase CDO28_RS02755 IPR006674 HD domain CDO28_RS02755 IPR023023 Deoxyguanosinetriphosphate triphosphohydrolase, type 2 CDO28_RS02755 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain CDO28_RS02755 IPR026875 Phosphohydrolase-associated domain CDO28_RS02760 IPR000361 FeS cluster biogenesis CDO28_RS02760 IPR016092 FeS cluster insertion protein CDO28_RS02760 IPR017870 FeS cluster insertion, C-terminal, conserved site CDO28_RS02765 IPR001736 Phospholipase D/Transphosphatidylase CDO28_RS02765 IPR025202 Phospholipase D-like domain CDO28_RS02765 IPR027379 Cardiolipin synthase N-terminal CDO28_RS02770 IPR004808 AP endonuclease 1 CDO28_RS02770 IPR005135 Endonuclease/exonuclease/phosphatase CDO28_RS02775 IPR006597 Sel1-like CDO28_RS02775 IPR011990 Tetratricopeptide-like helical domain CDO28_RS02780 IPR005017 Membrane protein, aromatic hydrocarbon degradation CDO28_RS02785 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDO28_RS02785 IPR002300 Aminoacyl-tRNA synthetase, class Ia CDO28_RS02785 IPR002303 Valine-tRNA ligase CDO28_RS02785 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CDO28_RS02785 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CDO28_RS02785 IPR010978 tRNA-binding arm CDO28_RS02785 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CDO28_RS02785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS02785 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CDO28_RS02790 IPR019632 Protein of unknown function DUF2497 CDO28_RS02795 IPR003423 Outer membrane efflux protein CDO28_RS02795 IPR010130 Type I secretion outer membrane protein, TolC CDO28_RS02800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS02805 IPR003400 Biopolymer transport protein ExbD/TolR CDO28_RS02805 IPR014170 TonB system transport protein ExbD type-1 CDO28_RS02810 IPR002898 MotA/TolQ/ExbB proton channel CDO28_RS02810 IPR014164 TonB-system energizer ExbB type-1 CDO28_RS02815 IPR004477 ComEC/Rec2-related protein CDO28_RS02815 IPR025405 Domain of unknown function DUF4131 CDO28_RS02820 IPR002020 Citrate synthase-like CDO28_RS02820 IPR010953 Citrate synthase, type I CDO28_RS02820 IPR016142 Citrate synthase-like, large alpha subdomain CDO28_RS02820 IPR016143 Citrate synthase-like, small alpha subdomain CDO28_RS02820 IPR019810 Citrate synthase active site CDO28_RS02820 IPR024176 Citrate synthase, bacterial-type CDO28_RS02830 IPR000305 GIY-YIG nuclease superfamily CDO28_RS02830 IPR027299 GIY-YIG domain CDO28_RS02835 IPR003835 Glycosyl transferase, family 19 CDO28_RS02840 IPR010415 Protein of unknown function DUF1009 CDO28_RS02845 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS02845 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CDO28_RS02845 IPR011004 Trimeric LpxA-like CDO28_RS02845 IPR018357 Hexapeptide transferase, conserved site CDO28_RS02845 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal CDO28_RS02850 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CDO28_RS02850 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CDO28_RS02850 IPR029069 HotDog domain CDO28_RS02855 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS02855 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CDO28_RS02855 IPR011004 Trimeric LpxA-like CDO28_RS02855 IPR018357 Hexapeptide transferase, conserved site CDO28_RS02855 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region CDO28_RS02860 IPR000184 Bacterial surface antigen (D15) CDO28_RS02860 IPR010827 Surface antigen variable number CDO28_RS02860 IPR023707 Outer membrane protein assembly factor BamA CDO28_RS02865 IPR001478 PDZ domain CDO28_RS02865 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CDO28_RS02865 IPR008915 Peptidase M50 CDO28_RS02870 IPR000374 Phosphatidate cytidylyltransferase CDO28_RS02875 IPR001441 Decaprenyl diphosphate synthase-like CDO28_RS02875 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CDO28_RS02880 IPR002661 Ribosome recycling factor CDO28_RS02880 IPR023584 Ribosome recycling factor domain CDO28_RS02885 IPR001048 Aspartate/glutamate/uridylate kinase CDO28_RS02885 IPR011817 Uridylate kinase CDO28_RS02885 IPR015963 Uridylate kinase, bacteria CDO28_RS02890 IPR001816 Translation elongation factor EFTs/EF1B CDO28_RS02890 IPR009060 UBA-like CDO28_RS02890 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CDO28_RS02890 IPR018101 Translation elongation factor Ts, conserved site CDO28_RS02895 IPR001865 Ribosomal protein S2 CDO28_RS02895 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CDO28_RS02895 IPR018130 Ribosomal protein S2, conserved site CDO28_RS02895 IPR023591 Ribosomal protein S2, flavodoxin-like domain CDO28_RS02905 IPR015000 Protein of unknown function DUF1849 CDO28_RS02910 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS02915 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CDO28_RS02915 IPR030395 CDO28_RS02915 CDO28_RS02920 IPR007434 Protein of unknown function DUF482 CDO28_RS02920 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS02925 IPR001310 Histidine triad (HIT) protein CDO28_RS02925 IPR011146 HIT-like domain CDO28_RS02930 IPR008407 Branched-chain amino acid transport, AzlD CDO28_RS02935 IPR011606 Branched-chain amino acid transport, permease CDO28_RS02940 IPR001270 ClpA/B family CDO28_RS02940 IPR003593 AAA+ ATPase domain CDO28_RS02940 IPR003959 ATPase, AAA-type, core CDO28_RS02940 IPR004176 Clp, N-terminal CDO28_RS02940 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA CDO28_RS02940 IPR018368 ClpA/B, conserved site 1 CDO28_RS02940 IPR019489 Clp ATPase, C-terminal CDO28_RS02940 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS02940 IPR028299 ClpA/B, conserved site 2 CDO28_RS02945 IPR003769 Adaptor protein ClpS, core CDO28_RS02945 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDO28_RS02945 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CDO28_RS02950 IPR010127 Phasin, subfamily 1 CDO28_RS02950 IPR018968 Phasin CDO28_RS02955 IPR021473 Protein of unknown function DUF3126 CDO28_RS02960 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS02960 IPR005881 Serine O-acetyltransferase CDO28_RS02960 IPR010493 Serine acetyltransferase, N-terminal CDO28_RS02960 IPR011004 Trimeric LpxA-like CDO28_RS02960 IPR018357 Hexapeptide transferase, conserved site CDO28_RS02965 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS02965 IPR029058 Alpha/Beta hydrolase fold CDO28_RS02970 IPR019401 Zinc finger, CHCC-type CDO28_RS02975 IPR002938 Monooxygenase, FAD-binding CDO28_RS02975 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS02980 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDO28_RS02980 IPR006233 Cystathionine beta-lyase, bacterial CDO28_RS02980 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS02980 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS02980 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS02985 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS02985 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein CDO28_RS02990 IPR000515 MetI-like domain CDO28_RS02990 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS02995 IPR000515 MetI-like domain CDO28_RS02995 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS03000 IPR003439 ABC transporter-like CDO28_RS03000 IPR003593 AAA+ ATPase domain CDO28_RS03000 IPR017871 ABC transporter, conserved site CDO28_RS03000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS03000 IPR030679 CDO28_RS03000 CDO28_RS03005 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CDO28_RS03010 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDO28_RS03010 IPR008333 Oxidoreductase, FAD-binding domain CDO28_RS03010 IPR017938 Riboflavin synthase-like beta-barrel CDO28_RS03015 IPR008318 Uncharacterised conserved protein UCP030820 CDO28_RS03020 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CDO28_RS03020 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CDO28_RS03025 IPR021270 Protein of unknown function DUF2849 CDO28_RS03030 IPR000878 Tetrapyrrole methylase CDO28_RS03030 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CDO28_RS03030 IPR006366 Uroporphyrin-III C-methyltransferase CDO28_RS03030 IPR006367 Sirohaem synthase, N-terminal CDO28_RS03030 IPR012409 Sirohaem synthase CDO28_RS03030 IPR014776 Tetrapyrrole methylase, subdomain 2 CDO28_RS03030 IPR014777 Tetrapyrrole methylase, subdomain 1 CDO28_RS03030 IPR016040 NAD(P)-binding domain CDO28_RS03030 IPR019478 Sirohaem synthase, dimerisation domain CDO28_RS03035 IPR002125 CMP/dCMP deaminase, zinc-binding CDO28_RS03035 IPR016192 APOBEC/CMP deaminase, zinc-binding CDO28_RS03035 IPR016193 Cytidine deaminase-like CDO28_RS03040 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CDO28_RS03040 IPR011551 NTP pyrophosphohydrolase MazG, bacterial CDO28_RS03050 IPR001584 Integrase, catalytic core CDO28_RS03050 IPR009057 Homeodomain-like CDO28_RS03050 IPR012337 Ribonuclease H-like domain CDO28_RS03060 IPR006073 GTP binding domain CDO28_RS03060 IPR016496 GTPase HflX CDO28_RS03060 IPR025121 GTPase HflX N-terminal domain CDO28_RS03060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS03060 IPR032305 CDO28_RS03060 CDO28_RS03065 IPR005001 Host factor Hfq CDO28_RS03065 IPR010920 Like-Sm (LSM) domain CDO28_RS03070 IPR001544 Aminotransferase, class IV CDO28_RS03075 IPR003148 Regulator of K+ conductance, N-terminal CDO28_RS03075 IPR006036 Potassium uptake protein TrkA CDO28_RS03075 IPR006037 Regulator of K+ conductance, C-terminal CDO28_RS03075 IPR016040 NAD(P)-binding domain CDO28_RS03080 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS03080 IPR002078 RNA polymerase sigma factor 54 interaction domain CDO28_RS03080 IPR002197 DNA binding HTH domain, Fis-type CDO28_RS03080 IPR003593 AAA+ ATPase domain CDO28_RS03080 IPR009057 Homeodomain-like CDO28_RS03080 IPR011006 CheY-like superfamily CDO28_RS03080 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDO28_RS03080 IPR025944 Sigma-54 interaction domain, conserved site CDO28_RS03080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS03085 IPR000014 PAS domain CDO28_RS03085 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS03085 IPR003660 HAMP linker domain CDO28_RS03085 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS03085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS03085 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator CDO28_RS03090 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS03090 IPR002078 RNA polymerase sigma factor 54 interaction domain CDO28_RS03090 IPR002197 DNA binding HTH domain, Fis-type CDO28_RS03090 IPR003593 AAA+ ATPase domain CDO28_RS03090 IPR009057 Homeodomain-like CDO28_RS03090 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) CDO28_RS03090 IPR011006 CheY-like superfamily CDO28_RS03090 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDO28_RS03090 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDO28_RS03090 IPR025944 Sigma-54 interaction domain, conserved site CDO28_RS03090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS03095 IPR000014 PAS domain CDO28_RS03095 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS03095 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS03095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS03095 IPR013767 PAS fold CDO28_RS03100 IPR001269 tRNA-dihydrouridine synthase CDO28_RS03100 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CDO28_RS03100 IPR013785 Aldolase-type TIM barrel CDO28_RS03100 IPR018517 tRNA-dihydrouridine synthase, conserved site CDO28_RS03100 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CDO28_RS03105 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDO28_RS03105 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CDO28_RS03105 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CDO28_RS03105 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CDO28_RS03105 IPR026596 Bifunctional enzyme IspD/IspF CDO28_RS03105 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS03110 IPR008136 CinA, C-terminal CDO28_RS03115 IPR005031 Streptomyces cyclase/dehydrase CDO28_RS03115 IPR023393 START-like domain CDO28_RS03125 IPR003698 Lipoyl synthase CDO28_RS03125 IPR006638 Elongator protein 3/MiaB/NifB CDO28_RS03125 IPR007197 Radical SAM CDO28_RS03125 IPR013785 Aldolase-type TIM barrel CDO28_RS03125 IPR031691 CDO28_RS03125 CDO28_RS03130 IPR007341 Transglycosylase-associated protein CDO28_RS03135 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS03135 IPR006258 Dihydrolipoamide dehydrogenase CDO28_RS03135 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDO28_RS03135 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS03135 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS03140 IPR000182 GNAT domain CDO28_RS03140 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS03145 IPR013830 CDO28_RS03145 CDO28_RS03150 IPR000089 Biotin/lipoyl attachment CDO28_RS03150 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CDO28_RS03150 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDO28_RS03150 IPR004167 E3 binding CDO28_RS03150 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex CDO28_RS03150 IPR011053 Single hybrid motif CDO28_RS03150 IPR023213 Chloramphenicol acetyltransferase-like domain CDO28_RS03155 IPR000089 Biotin/lipoyl attachment CDO28_RS03155 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDO28_RS03155 IPR005475 Transketolase-like, pyrimidine-binding domain CDO28_RS03155 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CDO28_RS03155 IPR011053 Single hybrid motif CDO28_RS03155 IPR029061 Thiamin diphosphate-binding fold CDO28_RS03155 IPR033248 CDO28_RS03155 CDO28_RS03160 IPR001017 Dehydrogenase, E1 component CDO28_RS03160 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y CDO28_RS03160 IPR029061 Thiamin diphosphate-binding fold CDO28_RS03165 IPR007060 Septum formation initiator FtsL/DivIC CDO28_RS03170 IPR000941 Enolase CDO28_RS03170 IPR020809 Enolase, conserved site CDO28_RS03170 IPR020810 Enolase, C-terminal CDO28_RS03170 IPR020811 Enolase, N-terminal CDO28_RS03170 IPR029017 Enolase N-terminal domain-like CDO28_RS03170 IPR029065 Enolase C-terminal domain-like CDO28_RS03175 IPR006218 DAHP synthetase I/KDSA CDO28_RS03175 IPR006269 3-deoxy-8-phosphooctulonate synthase CDO28_RS03175 IPR013785 Aldolase-type TIM barrel CDO28_RS03180 IPR025870 Glyoxalase-like domain CDO28_RS03180 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS03185 IPR004468 CTP synthase CDO28_RS03185 IPR017456 CTP synthase, N-terminal CDO28_RS03185 IPR017926 Glutamine amidotransferase CDO28_RS03185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS03185 IPR029062 Class I glutamine amidotransferase-like CDO28_RS03190 IPR004692 Preprotein translocase SecG subunit CDO28_RS03195 IPR000652 Triosephosphate isomerase CDO28_RS03195 IPR013785 Aldolase-type TIM barrel CDO28_RS03195 IPR020861 Triosephosphate isomerase, active site CDO28_RS03195 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CDO28_RS03200 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CDO28_RS03200 IPR016174 Di-haem cytochrome, transmembrane CDO28_RS03205 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CDO28_RS03210 IPR006094 FAD linked oxidase, N-terminal CDO28_RS03210 IPR016166 FAD-binding, type 2 CDO28_RS03210 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS03215 IPR029058 Alpha/Beta hydrolase fold CDO28_RS03220 IPR000565 DNA topoisomerase, type IIA, subunit B CDO28_RS03220 IPR001241 DNA topoisomerase, type IIA CDO28_RS03220 IPR002288 DNA gyrase B subunit, C-terminal CDO28_RS03220 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS03220 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative CDO28_RS03220 IPR006171 Toprim domain CDO28_RS03220 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CDO28_RS03220 IPR013759 DNA topoisomerase, type IIA, central domain CDO28_RS03220 IPR013760 DNA topoisomerase, type IIA-like domain CDO28_RS03220 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS03220 IPR018522 DNA topoisomerase, type IIA, conserved site CDO28_RS03220 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS03225 IPR000182 GNAT domain CDO28_RS03225 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS03235 IPR014598 Uncharacterised conserved protein UCP035865 CDO28_RS03235 IPR016024 Armadillo-type fold CDO28_RS03235 IPR019285 Protein of unknown function DUF2336 CDO28_RS03240 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CDO28_RS03240 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS03245 IPR002563 Flavin reductase-like, FMN-binding CDO28_RS03245 IPR012349 FMN-binding split barrel CDO28_RS03250 IPR000415 Nitroreductase-like CDO28_RS03250 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CDO28_RS03250 IPR029479 Nitroreductase CDO28_RS03260 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CDO28_RS03260 IPR002320 Threonine-tRNA ligase, class IIa CDO28_RS03260 IPR004095 TGS CDO28_RS03260 IPR004154 Anticodon-binding CDO28_RS03260 IPR012675 Beta-grasp domain CDO28_RS03260 IPR012676 TGS-like CDO28_RS03260 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CDO28_RS03260 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CDO28_RS03265 IPR012545 Protein of unknown function DUF1697 CDO28_RS03270 IPR018727 Protein of unknown function DUF2267 CDO28_RS03275 IPR002696 Putative membrane protein insertion efficiency factor CDO28_RS03280 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CDO28_RS03285 IPR001474 GTP cyclohydrolase I CDO28_RS03285 IPR018234 GTP cyclohydrolase I, conserved site CDO28_RS03285 IPR020602 GTP cyclohydrolase I domain CDO28_RS03290 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CDO28_RS03290 IPR026660 Phosphoribosyl-AMP cyclohydrolase CDO28_RS03300 IPR002641 Patatin/Phospholipase A2-related CDO28_RS03300 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDO28_RS03310 IPR000644 CBS domain CDO28_RS03315 IPR022764 Peptidase S54, rhomboid domain CDO28_RS03320 IPR009922 Protein of unknown function DUF1457 CDO28_RS03325 IPR009875 PilZ domain CDO28_RS03335 IPR010319 Transglutaminase-like cysteine peptidase, predicted CDO28_RS03345 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CDO28_RS03345 IPR007730 Sporulation-related domain CDO28_RS03345 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS03345 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CDO28_RS03355 IPR008320 Uncharacterised conserved protein UCP032025 CDO28_RS03360 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form CDO28_RS03360 IPR005130 Serine dehydratase-like, alpha subunit CDO28_RS03360 IPR005131 Serine dehydratase beta chain CDO28_RS03360 IPR029009 Allosteric substrate binding domain CDO28_RS03365 IPR006747 Protein of unknown function DUF599 CDO28_RS03370 IPR012429 Protein of unknown function DUF1624 CDO28_RS03375 IPR007318 Phospholipid methyltransferase CDO28_RS03380 IPR000551 MerR-type HTH domain CDO28_RS03380 IPR009061 DNA binding domain, putative CDO28_RS03385 IPR000644 CBS domain CDO28_RS03385 IPR006667 SLC41 divalent cation transporters, integral membrane domain CDO28_RS03385 IPR006668 Magnesium transporter, MgtE intracellular domain CDO28_RS03385 IPR006669 Magnesium transporter MgtE CDO28_RS03390 IPR023635 Peptide deformylase CDO28_RS03405 IPR007390 Sporulation stage V, protein R CDO28_RS03410 IPR006698 Thermus phage phiYS40, Orf56 CDO28_RS03415 IPR010650 PrkA C-terminal domain CDO28_RS03415 IPR013153 PrkA AAA domain CDO28_RS03415 IPR016230 Serine-protein kinase, PrkA CDO28_RS03415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS03425 IPR000544 Octanoyltransferase CDO28_RS03425 IPR004143 Biotin/lipoate A/B protein ligase CDO28_RS03425 IPR020605 Octanoyltransferase, conserved site CDO28_RS03430 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS03430 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS03435 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS03435 IPR011032 GroES (chaperonin 10)-like CDO28_RS03435 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS03435 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS03435 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase CDO28_RS03435 IPR016040 NAD(P)-binding domain CDO28_RS03440 IPR003791 Protein of unknown function UPF0178 CDO28_RS03445 IPR009781 Protein of unknown function DUF1345 CDO28_RS03450 IPR000801 Putative esterase CDO28_RS03450 IPR014186 S-formylglutathione hydrolase CDO28_RS03450 IPR029058 Alpha/Beta hydrolase fold CDO28_RS03455 IPR003691 Putative fluoride ion transporter CrcB CDO28_RS03460 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CDO28_RS03460 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDO28_RS03460 IPR006225 Pseudouridine synthase, RluC/RluD CDO28_RS03460 IPR020103 Pseudouridine synthase, catalytic domain CDO28_RS03465 IPR006439 HAD hydrolase, subfamily IA CDO28_RS03465 IPR023198 Phosphoglycolate phosphatase, domain 2 CDO28_RS03465 IPR023214 HAD-like domain CDO28_RS03470 IPR011419 ATP12, ATPase F1F0-assembly protein CDO28_RS03470 IPR023335 Orthogonal Bundle domain in ATP12 CDO28_RS03475 IPR000390 Small multidrug resistance protein family CDO28_RS03480 IPR003593 AAA+ ATPase domain CDO28_RS03480 IPR003959 ATPase, AAA-type, core CDO28_RS03480 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CDO28_RS03480 IPR021886 MgsA AAA+ ATPase C-terminal CDO28_RS03480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS03480 IPR032423 CDO28_RS03480 CDO28_RS03485 IPR001478 PDZ domain CDO28_RS03485 IPR001940 Peptidase S1C CDO28_RS03485 IPR009003 Trypsin-like cysteine/serine peptidase domain CDO28_RS03485 IPR011782 Peptidase S1C, Do CDO28_RS03490 IPR000572 Oxidoreductase, molybdopterin-binding domain CDO28_RS03490 IPR022867 Sulphoxide reductase catalytic subunit YedY CDO28_RS03495 IPR013130 Ferric reductase transmembrane component-like domain CDO28_RS03495 IPR022837 Sulphoxide reductase heme-binding subunit YedZ CDO28_RS03505 IPR000456 Ribosomal protein L17 CDO28_RS03510 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain CDO28_RS03510 IPR011260 RNA polymerase, alpha subunit, C-terminal CDO28_RS03510 IPR011262 DNA-directed RNA polymerase, insert domain CDO28_RS03510 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CDO28_RS03510 IPR011773 DNA-directed RNA polymerase, alpha subunit CDO28_RS03515 IPR001971 Ribosomal protein S11 CDO28_RS03515 IPR018102 Ribosomal S11, conserved site CDO28_RS03515 IPR019981 Ribosomal protein S11, bacterial-type CDO28_RS03520 IPR001892 Ribosomal protein S13 CDO28_RS03520 IPR010979 Ribosomal protein S13-like, H2TH CDO28_RS03520 IPR018269 Ribosomal protein S13, conserved site CDO28_RS03520 IPR019980 Ribosomal protein S13, bacterial-type CDO28_RS03520 IPR027437 30s ribosomal protein S13, C-terminal CDO28_RS03525 IPR000850 Adenylate kinase/UMP-CMP kinase CDO28_RS03525 IPR006259 Adenylate kinase subfamily CDO28_RS03525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS03530 IPR002208 SecY/SEC61-alpha family CDO28_RS03530 IPR023201 SecY subunit domain CDO28_RS03530 IPR026593 Protein translocase subunit SecY CDO28_RS03530 IPR030659 CDO28_RS03530 CDO28_RS03535 IPR001196 Ribosomal protein L15, conserved site CDO28_RS03535 IPR005749 Ribosomal protein L15, bacterial-type CDO28_RS03535 IPR021131 Ribosomal protein L18e/L15P CDO28_RS03535 IPR030878 CDO28_RS03535 CDO28_RS03540 IPR005996 Ribosomal protein L30, bacterial-type CDO28_RS03540 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CDO28_RS03545 IPR005324 Ribosomal protein S5, C-terminal CDO28_RS03545 IPR005712 Ribosomal protein S5, bacterial-type CDO28_RS03545 IPR013810 Ribosomal protein S5, N-terminal CDO28_RS03545 IPR014720 Double-stranded RNA-binding domain CDO28_RS03545 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS03545 IPR018192 Ribosomal protein S5, N-terminal, conserved site CDO28_RS03545 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS03550 IPR004389 Ribosomal protein L18, bacterial-type CDO28_RS03550 IPR005484 Ribosomal protein L18/L5 CDO28_RS03555 IPR000702 Ribosomal protein L6 CDO28_RS03555 IPR002358 Ribosomal protein L6, conserved site CDO28_RS03555 IPR019906 Ribosomal protein L6, bacterial-type CDO28_RS03555 IPR020040 Ribosomal protein L6, alpha-beta domain CDO28_RS03560 IPR000630 Ribosomal protein S8 CDO28_RS03565 IPR001209 Ribosomal protein S14 CDO28_RS03565 IPR018271 Ribosomal protein S14, conserved site CDO28_RS03565 IPR023036 Ribosomal protein S14, bacterial/plastid CDO28_RS03570 IPR002132 Ribosomal protein L5 CDO28_RS03570 IPR020929 Ribosomal protein L5, conserved site CDO28_RS03570 IPR020930 Ribosomal protein L5, bacterial-type CDO28_RS03570 IPR022803 Ribosomal protein L5 domain CDO28_RS03570 IPR031309 CDO28_RS03570 CDO28_RS03570 IPR031310 CDO28_RS03570 CDO28_RS03575 IPR003256 Ribosomal protein L24 CDO28_RS03575 IPR005824 KOW CDO28_RS03575 IPR005825 Ribosomal protein L24/L26, conserved site CDO28_RS03575 IPR008991 Translation protein SH3-like domain CDO28_RS03575 IPR014722 Ribosomal protein L2 domain 2 CDO28_RS03580 IPR000218 Ribosomal protein L14b/L23e CDO28_RS03580 IPR005745 Ribosomal protein L14, bacterial-type CDO28_RS03580 IPR019972 Ribosomal protein L14 conserved site CDO28_RS03585 IPR000266 Ribosomal protein S17 CDO28_RS03585 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS03585 IPR019984 Ribosomal protein S17, bacterial-type CDO28_RS03590 IPR001854 Ribosomal protein L29 CDO28_RS03590 IPR018254 Ribosomal protein L29, conserved site CDO28_RS03595 IPR000114 Ribosomal protein L16 CDO28_RS03595 IPR016180 Ribosomal protein L10e/L16 CDO28_RS03595 IPR020798 Ribosomal protein L16, conserved site CDO28_RS03600 IPR001351 Ribosomal protein S3, C-terminal CDO28_RS03600 IPR004044 K Homology domain, type 2 CDO28_RS03600 IPR004087 K Homology domain CDO28_RS03600 IPR005704 Ribosomal protein S3, bacterial CDO28_RS03600 IPR009019 K homology domain, prokaryotic type CDO28_RS03600 IPR015946 K homology domain-like, alpha/beta CDO28_RS03600 IPR018280 Ribosomal protein S3, conserved site CDO28_RS03605 IPR001063 Ribosomal protein L22/L17 CDO28_RS03605 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CDO28_RS03605 IPR018260 Ribosomal protein L22/L17, conserved site CDO28_RS03610 IPR002222 Ribosomal protein S19/S15 CDO28_RS03610 IPR005732 Ribosomal protein S19, bacterial-type CDO28_RS03610 IPR020934 Ribosomal protein S19 conserved site CDO28_RS03610 IPR023575 Ribosomal protein S19, superfamily CDO28_RS03615 IPR002171 Ribosomal protein L2 CDO28_RS03615 IPR005880 Ribosomal protein L2, bacterial/organellar-type CDO28_RS03615 IPR008991 Translation protein SH3-like domain CDO28_RS03615 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS03615 IPR014722 Ribosomal protein L2 domain 2 CDO28_RS03615 IPR014726 Ribosomal protein L2, domain 3 CDO28_RS03615 IPR022666 Ribosomal Proteins L2, RNA binding domain CDO28_RS03615 IPR022669 Ribosomal protein L2, C-terminal CDO28_RS03615 IPR022671 Ribosomal protein L2, conserved site CDO28_RS03620 IPR012677 Nucleotide-binding, alpha-beta plait CDO28_RS03620 IPR012678 Ribosomal protein L23/L15e core domain CDO28_RS03620 IPR013025 Ribosomal protein L25/L23 CDO28_RS03625 IPR002136 Ribosomal protein L4/L1e CDO28_RS03625 IPR013005 Ribosomal protein L4/L1e, bacterial-type CDO28_RS03625 IPR023574 Ribosomal protein L4 domain CDO28_RS03630 IPR000597 Ribosomal protein L3 CDO28_RS03630 IPR009000 Translation protein, beta-barrel domain CDO28_RS03630 IPR019926 Ribosomal protein L3, conserved site CDO28_RS03630 IPR019927 Ribosomal protein L3, bacterial/organelle-type CDO28_RS03635 IPR001848 Ribosomal protein S10 CDO28_RS03635 IPR018268 Ribosomal protein S10, conserved site CDO28_RS03635 IPR027486 Ribosomal protein S10 domain CDO28_RS03640 IPR000795 Elongation factor, GTP-binding domain CDO28_RS03640 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDO28_RS03640 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CDO28_RS03640 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CDO28_RS03640 IPR005225 Small GTP-binding protein domain CDO28_RS03640 IPR009000 Translation protein, beta-barrel domain CDO28_RS03640 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDO28_RS03640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS03640 IPR031157 CDO28_RS03640 CDO28_RS03645 IPR000640 Translation elongation factor EFG, V domain CDO28_RS03645 IPR000795 Elongation factor, GTP-binding domain CDO28_RS03645 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CDO28_RS03645 IPR004540 Translation elongation factor EFG/EF2 CDO28_RS03645 IPR005225 Small GTP-binding protein domain CDO28_RS03645 IPR005517 Translation elongation factor EFG/EF2, domain IV CDO28_RS03645 IPR009000 Translation protein, beta-barrel domain CDO28_RS03645 IPR009022 Elongation factor G, III-V domain CDO28_RS03645 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS03645 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS03645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS03645 IPR031157 CDO28_RS03645 CDO28_RS03650 IPR000235 Ribosomal protein S5/S7 CDO28_RS03650 IPR005717 Ribosomal protein S7, bacterial/organellar-type CDO28_RS03650 IPR020606 Ribosomal protein S7, conserved site CDO28_RS03650 IPR023798 Ribosomal protein S7 domain CDO28_RS03655 IPR005679 Ribosomal protein S12, bacteria CDO28_RS03655 IPR006032 Ribosomal protein S12/S23 CDO28_RS03655 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS03665 IPR000722 RNA polymerase, alpha subunit CDO28_RS03665 IPR006592 RNA polymerase, N-terminal CDO28_RS03665 IPR007066 RNA polymerase Rpb1, domain 3 CDO28_RS03665 IPR007080 RNA polymerase Rpb1, domain 1 CDO28_RS03665 IPR007081 RNA polymerase Rpb1, domain 5 CDO28_RS03665 IPR007083 RNA polymerase Rpb1, domain 4 CDO28_RS03665 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CDO28_RS03670 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 CDO28_RS03670 IPR007121 RNA polymerase, beta subunit, conserved site CDO28_RS03670 IPR007641 RNA polymerase Rpb2, domain 7 CDO28_RS03670 IPR007642 RNA polymerase Rpb2, domain 2 CDO28_RS03670 IPR007644 RNA polymerase, beta subunit, protrusion CDO28_RS03670 IPR007645 RNA polymerase Rpb2, domain 3 CDO28_RS03670 IPR010243 DNA-directed RNA polymerase, beta subunit CDO28_RS03670 IPR014724 RNA polymerase Rpb2, OB-fold CDO28_RS03670 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CDO28_RS03675 IPR000206 Ribosomal protein L7/L12 CDO28_RS03675 IPR008932 Ribosomal protein L7/L12, oligomerisation CDO28_RS03675 IPR013823 Ribosomal protein L7/L12, C-terminal CDO28_RS03675 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDO28_RS03680 IPR001790 Ribosomal protein L10/acidic P0 CDO28_RS03680 IPR002363 Ribosomal protein L10, eubacterial, conserved site CDO28_RS03680 IPR022973 Ribosomal protein L10 CDO28_RS03685 IPR002143 Ribosomal protein L1 CDO28_RS03685 IPR005878 Ribosomal protein L1, bacterial-type CDO28_RS03685 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich CDO28_RS03685 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CDO28_RS03685 IPR023673 Ribosomal protein L1, conserved site CDO28_RS03685 IPR023674 Ribosomal protein L1-like CDO28_RS03685 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CDO28_RS03690 IPR000911 Ribosomal protein L11/L12 CDO28_RS03690 IPR006519 Ribosomal protein L11, bacterial-type CDO28_RS03690 IPR020783 Ribosomal protein L11, C-terminal CDO28_RS03690 IPR020784 Ribosomal protein L11, N-terminal CDO28_RS03695 IPR001062 Transcription antitermination protein, NusG CDO28_RS03695 IPR005824 KOW CDO28_RS03695 IPR006645 NusG, N-terminal CDO28_RS03695 IPR008991 Translation protein SH3-like domain CDO28_RS03695 IPR014722 Ribosomal protein L2 domain 2 CDO28_RS03695 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CDO28_RS03700 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CDO28_RS03700 IPR005807 SecE subunit of protein translocation complex CDO28_RS03700 IPR022943 Preprotein translocase subunit SecE CDO28_RS03710 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS03710 IPR016040 NAD(P)-binding domain CDO28_RS03720 IPR000795 Elongation factor, GTP-binding domain CDO28_RS03720 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CDO28_RS03720 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CDO28_RS03720 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CDO28_RS03720 IPR005225 Small GTP-binding protein domain CDO28_RS03720 IPR009000 Translation protein, beta-barrel domain CDO28_RS03720 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDO28_RS03720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS03720 IPR031157 CDO28_RS03720 CDO28_RS03735 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDO28_RS03735 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CDO28_RS03735 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDO28_RS03735 IPR029028 Alpha/beta knot methyltransferases CDO28_RS03735 IPR029064 50S ribosomal protein L30e-like CDO28_RS03745 IPR003680 Flavodoxin-like fold CDO28_RS03745 IPR023048 NADH-azoreductase, FMN-dependent CDO28_RS03745 IPR029039 Flavoprotein-like CDO28_RS03750 IPR000847 Transcription regulator HTH, LysR CDO28_RS03750 IPR005119 LysR, substrate-binding CDO28_RS03750 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS03755 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS03765 IPR002504 Inorganic polyphosphate/ATP-NAD kinase CDO28_RS03765 IPR016064 ATP-NAD kinase-like domain CDO28_RS03765 IPR017437 ATP-NAD kinase, PpnK-type, all-beta CDO28_RS03765 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 CDO28_RS03780 IPR000352 Peptide chain release factor class I/class II CDO28_RS03780 IPR004374 Peptide chain release factor 2 CDO28_RS03780 IPR005139 Peptide chain release factor CDO28_RS03780 IPR014720 Double-stranded RNA-binding domain CDO28_RS03780 IPR020853 Peptide chain release factor 2, bacterial CDO28_RS03790 IPR001264 Glycosyl transferase, family 51 CDO28_RS03790 IPR001460 Penicillin-binding protein, transpeptidase CDO28_RS03790 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS03790 IPR023346 Lysozyme-like domain CDO28_RS03790 IPR031376 CDO28_RS03790 CDO28_RS03795 IPR002508 Cell wall hydrolase/autolysin, catalytic CDO28_RS03795 IPR021731 AMIN domain CDO28_RS03805 IPR004659 Ribonuclease E/G CDO28_RS03805 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS03805 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CDO28_RS03805 IPR028878 Ribonuclease E CDO28_RS03830 IPR004839 Aminotransferase, class I/classII CDO28_RS03830 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS03830 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS03830 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS03840 IPR001853 DSBA-like thioredoxin domain CDO28_RS03840 IPR012336 Thioredoxin-like fold CDO28_RS03845 IPR001874 Dehydroquinase, class II CDO28_RS03845 IPR018509 Dehydroquinase, class II, conserved site CDO28_RS03850 IPR000089 Biotin/lipoyl attachment CDO28_RS03850 IPR001249 Acetyl-CoA biotin carboxyl carrier CDO28_RS03850 IPR001882 Biotin-binding site CDO28_RS03850 IPR011053 Single hybrid motif CDO28_RS03855 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CDO28_RS03855 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDO28_RS03855 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CDO28_RS03855 IPR005482 Biotin carboxylase, C-terminal CDO28_RS03855 IPR011054 Rudiment single hybrid motif CDO28_RS03855 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS03855 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS03855 IPR016185 Pre-ATP-grasp domain CDO28_RS03860 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase CDO28_RS03860 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS03865 IPR019225 Protein of unknown function DUF2155 CDO28_RS03870 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 CDO28_RS03875 IPR000182 GNAT domain CDO28_RS03875 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS03880 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related CDO28_RS03880 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit CDO28_RS03880 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic CDO28_RS03880 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site CDO28_RS03880 IPR018027 Asn/Gln amidotransferase CDO28_RS03880 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CDO28_RS03885 IPR018654 Protein of unknown function DUF2084 CDO28_RS03890 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CDO28_RS03890 IPR020556 Amidase, conserved site CDO28_RS03890 IPR023631 Amidase signature domain CDO28_RS03895 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit CDO28_RS03900 IPR001279 Beta-lactamase-like CDO28_RS03900 IPR022877 Protein of unknown funcion UPF0173 CDO28_RS03905 IPR005227 Resolvase, holliday junction-type, YqgF-like CDO28_RS03905 IPR006641 YqgF/RNase H-like domain CDO28_RS03905 IPR012337 Ribonuclease H-like domain CDO28_RS03920 IPR004776 Auxin efflux carrier CDO28_RS03925 IPR006089 Acyl-CoA dehydrogenase, conserved site CDO28_RS03925 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDO28_RS03925 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDO28_RS03925 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CDO28_RS03930 IPR002082 Aspartate carbamoyltransferase CDO28_RS03930 IPR006130 Aspartate/ornithine carbamoyltransferase CDO28_RS03930 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CDO28_RS03930 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CDO28_RS03935 IPR004722 Dihydroorotase CDO28_RS03935 IPR006680 Amidohydrolase 1 CDO28_RS03935 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS03935 IPR032466 CDO28_RS03935 CDO28_RS03940 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CDO28_RS03945 IPR003488 DNA recombination-mediator protein A CDO28_RS03950 IPR000380 DNA topoisomerase, type IA CDO28_RS03950 IPR003601 DNA topoisomerase, type IA, domain 2 CDO28_RS03950 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CDO28_RS03950 IPR005733 DNA topoisomerase I, bacterial-type CDO28_RS03950 IPR006171 Toprim domain CDO28_RS03950 IPR013497 DNA topoisomerase, type IA, central CDO28_RS03950 IPR013498 DNA topoisomerase, type IA, zn finger CDO28_RS03950 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CDO28_RS03950 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CDO28_RS03950 IPR023405 DNA topoisomerase, type IA, core domain CDO28_RS03950 IPR023406 DNA topoisomerase, type IA, active site CDO28_RS03950 IPR025589 Topoisomerase C-terminal repeat CDO28_RS03950 IPR028612 DNA topoisomerase I, type IA CDO28_RS03955 IPR003029 Ribosomal protein S1, RNA-binding domain CDO28_RS03955 IPR004476 Ribonuclease II/ribonuclease R CDO28_RS03955 IPR011805 Ribonuclease R CDO28_RS03955 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS03955 IPR022966 Ribonuclease II/R, conserved site CDO28_RS03955 IPR022967 RNA-binding domain, S1 CDO28_RS03960 IPR009325 Protein of unknown function DUF983 CDO28_RS03965 IPR015797 NUDIX hydrolase domain-like CDO28_RS03970 IPR011701 Major facilitator superfamily CDO28_RS03970 IPR020846 Major facilitator superfamily domain CDO28_RS03975 IPR001705 Ribosomal protein L33 CDO28_RS03975 IPR011332 Zinc-binding ribosomal protein CDO28_RS03975 IPR018264 Ribosomal protein L33, conserved site CDO28_RS03980 IPR000160 GGDEF domain CDO28_RS03980 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS03980 IPR011006 CheY-like superfamily CDO28_RS03980 IPR029787 Nucleotide cyclase CDO28_RS03985 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS03985 IPR011006 CheY-like superfamily CDO28_RS03990 IPR021955 Protein of unknown function DUF3572 CDO28_RS03995 IPR001126 DNA-repair protein, UmuC-like CDO28_RS03995 IPR017961 DNA polymerase, Y-family, little finger domain CDO28_RS03995 IPR022880 DNA polymerase IV CDO28_RS04000 IPR002477 Peptidoglycan binding-like CDO28_RS04000 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS04000 IPR016915 Uncharacterised conserved protein UCP029342 CDO28_RS04005 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDO28_RS04005 IPR004013 PHP, C-terminal CDO28_RS04005 IPR004805 DNA polymerase III, alpha subunit CDO28_RS04005 IPR011708 Bacterial DNA polymerase III, alpha subunit CDO28_RS04005 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS04005 IPR016195 Polymerase/histidinol phosphatase-like CDO28_RS04005 IPR029460 DNA polymerase, helix-hairpin-helix motif CDO28_RS04010 IPR003439 ABC transporter-like CDO28_RS04010 IPR003593 AAA+ ATPase domain CDO28_RS04010 IPR017871 ABC transporter, conserved site CDO28_RS04010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS04015 IPR003838 Permease FtsX-like CDO28_RS04015 IPR011925 Lipoprotein releasing system, transmembrane protein, LolC/E family CDO28_RS04015 IPR025857 MacB-like periplasmic core domain CDO28_RS04020 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CDO28_RS04020 IPR002316 Proline-tRNA ligase, class IIa CDO28_RS04020 IPR004154 Anticodon-binding CDO28_RS04020 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CDO28_RS04020 IPR023716 Proline-tRNA ligase, class IIa, type 2 CDO28_RS04030 IPR002145 Ribbon-helix-helix protein, copG CDO28_RS04030 IPR010985 Ribbon-helix-helix CDO28_RS04035 IPR002716 PIN domain CDO28_RS04035 IPR022907 VapC family CDO28_RS04035 IPR029060 PIN domain-like CDO28_RS04040 IPR009935 Protein of unknown function DUF1467 CDO28_RS04045 IPR017515 Methylmalonyl-CoA epimerase CDO28_RS04045 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS04050 IPR001279 Beta-lactamase-like CDO28_RS04050 IPR011108 RNA-metabolising metallo-beta-lactamase CDO28_RS04050 IPR030854 CDO28_RS04050 CDO28_RS04055 IPR003142 Biotin protein ligase, C-terminal CDO28_RS04055 IPR004143 Biotin/lipoate A/B protein ligase CDO28_RS04055 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CDO28_RS04055 IPR008988 Transcriptional repressor, C-terminal CDO28_RS04060 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CDO28_RS04060 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CDO28_RS04065 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CDO28_RS04065 IPR003918 NADH:ubiquinone oxidoreductase CDO28_RS04065 IPR010227 NADH-quinone oxidoreductase, chain M/4 CDO28_RS04070 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal CDO28_RS04070 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CDO28_RS04070 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 CDO28_RS04070 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CDO28_RS04075 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CDO28_RS04080 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CDO28_RS04085 IPR010226 NADH-quinone oxidoreductase, chain I CDO28_RS04085 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS04085 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS04090 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CDO28_RS04090 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CDO28_RS04095 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CDO28_RS04095 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS04095 IPR006656 Molybdopterin oxidoreductase CDO28_RS04095 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CDO28_RS04095 IPR012675 Beta-grasp domain CDO28_RS04095 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal CDO28_RS04095 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CDO28_RS04095 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS04105 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CDO28_RS04105 IPR011537 NADH ubiquinone oxidoreductase, F subunit CDO28_RS04105 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CDO28_RS04105 IPR019554 Soluble ligand binding domain CDO28_RS04105 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding CDO28_RS04110 IPR002023 NADH-quinone oxidoreductase subunit E-like CDO28_RS04110 IPR012336 Thioredoxin-like fold CDO28_RS04120 IPR001135 NADH-quinone oxidoreductase, subunit D CDO28_RS04120 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site CDO28_RS04120 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CDO28_RS04120 IPR029014 NiFe hydrogenase-like CDO28_RS04125 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CDO28_RS04125 IPR010218 NADH dehydrogenase, subunit C CDO28_RS04125 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site CDO28_RS04130 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CDO28_RS04130 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CDO28_RS04135 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CDO28_RS04135 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CDO28_RS04160 IPR011051 RmlC-like cupin domain CDO28_RS04160 IPR013096 Cupin 2, conserved barrel CDO28_RS04160 IPR014710 RmlC-like jelly roll fold CDO28_RS04165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS04170 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS04170 IPR014576 Predicted phosphoesterase, YhaO type CDO28_RS04170 IPR029052 Metallo-dependent phosphatase-like CDO28_RS04175 IPR000835 MarR-type HTH domain CDO28_RS04175 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS04185 IPR015943 WD40/YVTN repeat-like-containing domain CDO28_RS04185 IPR027372 Phytase-like domain CDO28_RS04190 IPR000119 Histone-like bacterial DNA-binding protein CDO28_RS04190 IPR010992 Integration host factor (IHF)-like DNA-binding domain CDO28_RS04190 IPR020816 Histone-like DNA-binding protein, conserved site CDO28_RS04195 IPR003111 Peptidase S16, lon N-terminal CDO28_RS04195 IPR003593 AAA+ ATPase domain CDO28_RS04195 IPR003959 ATPase, AAA-type, core CDO28_RS04195 IPR004815 Lon protease, bacterial/eukaryotic-type CDO28_RS04195 IPR008268 Peptidase S16, active site CDO28_RS04195 IPR008269 Peptidase S16, Lon C-terminal CDO28_RS04195 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS04195 IPR015947 PUA-like domain CDO28_RS04195 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS04195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS04195 IPR027543 Lon protease, bacterial CDO28_RS04200 IPR003593 AAA+ ATPase domain CDO28_RS04200 IPR003959 ATPase, AAA-type, core CDO28_RS04200 IPR004487 Clp protease, ATP-binding subunit ClpX CDO28_RS04200 IPR010603 Zinc finger, ClpX C4-type CDO28_RS04200 IPR019489 Clp ATPase, C-terminal CDO28_RS04200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS04205 IPR001907 ATP-dependent Clp protease proteolytic subunit CDO28_RS04205 IPR018215 ClpP, active site CDO28_RS04205 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CDO28_RS04205 IPR029045 ClpP/crotonase-like domain CDO28_RS04205 IPR033135 CDO28_RS04205 CDO28_RS04210 IPR001736 Phospholipase D/Transphosphatidylase CDO28_RS04210 IPR025202 Phospholipase D-like domain CDO28_RS04215 IPR005135 Endonuclease/exonuclease/phosphatase CDO28_RS04220 IPR001128 Cytochrome P450 CDO28_RS04220 IPR002397 Cytochrome P450, B-class CDO28_RS04220 IPR017972 Cytochrome P450, conserved site CDO28_RS04230 IPR008579 Domain of unknown function DUF861, cupin-3 CDO28_RS04230 IPR011051 RmlC-like cupin domain CDO28_RS04230 IPR014710 RmlC-like jelly roll fold CDO28_RS04235 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDO28_RS04235 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase CDO28_RS04235 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS04235 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS04235 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS04240 IPR003781 CoA-binding CDO28_RS04240 IPR016040 NAD(P)-binding domain CDO28_RS04245 IPR000620 Drug/metabolite transporter CDO28_RS04250 IPR001753 Crotonase superfamily CDO28_RS04250 IPR029045 ClpP/crotonase-like domain CDO28_RS04255 IPR003736 Phenylacetic acid degradation-related domain CDO28_RS04255 IPR006683 Thioesterase superfamily CDO28_RS04255 IPR029069 HotDog domain CDO28_RS04265 IPR005822 Ribosomal protein L13 CDO28_RS04265 IPR005823 Ribosomal protein L13, bacterial-type CDO28_RS04270 IPR000754 Ribosomal protein S9 CDO28_RS04270 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS04270 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS04270 IPR020574 Ribosomal protein S9, conserved site CDO28_RS04270 IPR023035 Ribosomal protein S9, bacterial/plastid CDO28_RS04275 IPR005925 Agmatinase-related CDO28_RS04275 IPR006035 Ureohydrolase CDO28_RS04275 IPR020855 Ureohydrolase, manganese-binding site CDO28_RS04275 IPR023696 Ureohydrolase domain CDO28_RS04280 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDO28_RS04280 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 CDO28_RS04280 IPR016040 NAD(P)-binding domain CDO28_RS04280 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site CDO28_RS04285 IPR003780 COX15/CtaA family CDO28_RS04285 IPR023754 Heme A synthase, type 2 CDO28_RS04290 IPR021265 Protein of unknown function DUF2842 CDO28_RS04295 IPR011152 Phosphoesterase MJ0912 CDO28_RS04295 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CDO28_RS04295 IPR029052 Metallo-dependent phosphatase-like CDO28_RS04300 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS04300 IPR011004 Trimeric LpxA-like CDO28_RS04300 IPR018357 Hexapeptide transferase, conserved site CDO28_RS04305 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS04310 IPR003856 Lipopolysaccharide biosynthesis CDO28_RS04310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS04315 IPR003715 Polysaccharide export protein CDO28_RS04315 IPR019554 Soluble ligand binding domain CDO28_RS04320 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS04325 IPR003362 Bacterial sugar transferase CDO28_RS04325 IPR016040 NAD(P)-binding domain CDO28_RS04325 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ CDO28_RS04325 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CDO28_RS04330 IPR007016 O-antigen ligase-related CDO28_RS04335 IPR001296 Glycosyl transferase, family 1 CDO28_RS04335 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS04365 IPR000551 MerR-type HTH domain CDO28_RS04365 IPR009061 DNA binding domain, putative CDO28_RS04370 IPR000119 Histone-like bacterial DNA-binding protein CDO28_RS04370 IPR005684 Integration host factor, alpha subunit CDO28_RS04370 IPR010992 Integration host factor (IHF)-like DNA-binding domain CDO28_RS04370 IPR020816 Histone-like DNA-binding protein, conserved site CDO28_RS04375 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CDO28_RS04375 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal CDO28_RS04375 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDO28_RS04375 IPR016039 Thiolase-like CDO28_RS04380 IPR003664 Fatty acid synthesis PlsX protein CDO28_RS04380 IPR012281 Phospholipid biosynthesis protein, PlsX-like CDO28_RS04380 IPR024084 Isopropylmalate dehydrogenase-like domain CDO28_RS04385 IPR003772 Protein of unknown function DUF177 CDO28_RS04390 IPR014569 Ubiquinol-cytochrome c chaperone, CBP3-related CDO28_RS04390 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 CDO28_RS04395 IPR007450 Lipoprotein SmpA/OmlA CDO28_RS04400 IPR004131 Pyrophosphate-energised proton pump CDO28_RS04405 IPR011701 Major facilitator superfamily CDO28_RS04405 IPR020846 Major facilitator superfamily domain CDO28_RS04410 IPR006027 NusB/RsmB/TIM44 CDO28_RS04410 IPR011605 NusB antitermination factor CDO28_RS04415 IPR002180 6,7-dimethyl-8-ribityllumazine synthase CDO28_RS04420 IPR011051 RmlC-like cupin domain CDO28_RS04420 IPR013096 Cupin 2, conserved barrel CDO28_RS04420 IPR014710 RmlC-like jelly roll fold CDO28_RS04425 IPR000182 GNAT domain CDO28_RS04425 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS04435 IPR001783 Lumazine-binding protein CDO28_RS04435 IPR017938 Riboflavin synthase-like beta-barrel CDO28_RS04435 IPR023366 ATP synthase subunit alpha-like domain CDO28_RS04435 IPR026017 Lumazine-binding domain CDO28_RS04440 IPR002125 CMP/dCMP deaminase, zinc-binding CDO28_RS04440 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CDO28_RS04440 IPR004794 Riboflavin biosynthesis protein RibD CDO28_RS04440 IPR016192 APOBEC/CMP deaminase, zinc-binding CDO28_RS04440 IPR016193 Cytidine deaminase-like CDO28_RS04440 IPR024072 Dihydrofolate reductase-like domain CDO28_RS04445 IPR003796 Ribonucleotide reductase regulator NrdR-like CDO28_RS04445 IPR005144 ATP-cone CDO28_RS04450 IPR001085 Serine hydroxymethyltransferase CDO28_RS04450 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS04450 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS04450 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS04450 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CDO28_RS04455 IPR002477 Peptidoglycan binding-like CDO28_RS04455 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS04460 IPR000835 MarR-type HTH domain CDO28_RS04460 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS04460 IPR023187 Transcriptional regulator MarR-type, conserved site CDO28_RS04470 IPR001731 Porphobilinogen synthase CDO28_RS04470 IPR013785 Aldolase-type TIM barrel CDO28_RS04470 IPR030656 CDO28_RS04470 CDO28_RS04475 IPR010432 RDD CDO28_RS04480 IPR007471 Arginine-tRNA-protein transferase, N-terminal CDO28_RS04480 IPR007472 Arginine-tRNA-protein transferase, C-terminal CDO28_RS04480 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS04480 IPR017138 Arginine-tRNA-protein transferase, predicted, prokaryotic CDO28_RS04485 IPR000620 Drug/metabolite transporter CDO28_RS04490 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS04490 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS04495 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CDO28_RS04495 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative CDO28_RS04495 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel CDO28_RS04495 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CDO28_RS04495 IPR013760 DNA topoisomerase, type IIA-like domain CDO28_RS04495 IPR024946 Arginine repressor C-terminal-like domain CDO28_RS04510 IPR001844 Chaperonin Cpn60 CDO28_RS04510 IPR002423 Chaperonin Cpn60/TCP-1 CDO28_RS04510 IPR018370 Chaperonin Cpn60, conserved site CDO28_RS04510 IPR027409 GroEL-like apical domain CDO28_RS04510 IPR027413 GroEL-like equatorial domain CDO28_RS04515 IPR001763 Rhodanese-like domain CDO28_RS04520 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CDO28_RS04520 IPR004115 GAD-like domain CDO28_RS04520 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CDO28_RS04520 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CDO28_RS04520 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type CDO28_RS04520 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS04520 IPR029351 GAD domain CDO28_RS04525 IPR011701 Major facilitator superfamily CDO28_RS04525 IPR020846 Major facilitator superfamily domain CDO28_RS04535 IPR001117 Multicopper oxidase, type 1 CDO28_RS04535 IPR002355 Multicopper oxidase, copper-binding site CDO28_RS04535 IPR008972 Cupredoxin CDO28_RS04535 IPR011706 Multicopper oxidase, type 2 CDO28_RS04535 IPR011707 Multicopper oxidase, type 3 CDO28_RS04535 IPR033138 CDO28_RS04535 CDO28_RS04540 IPR002121 HRDC domain CDO28_RS04540 IPR002562 3'-5' exonuclease domain CDO28_RS04540 IPR006292 Ribonuclease D CDO28_RS04540 IPR010997 HRDC-like CDO28_RS04540 IPR012337 Ribonuclease H-like domain CDO28_RS04545 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS04545 IPR029787 Nucleotide cyclase CDO28_RS04550 IPR027372 Phytase-like domain CDO28_RS04555 IPR003695 Ppx/GppA phosphatase CDO28_RS04555 IPR022371 Exopolyphosphatase CDO28_RS04560 IPR003414 Polyphosphate kinase CDO28_RS04560 IPR024953 Polyphosphate kinase middle domain CDO28_RS04560 IPR025198 Polyphosphate kinase N-terminal domain CDO28_RS04560 IPR025200 Polyphosphate kinase C-terminal domain CDO28_RS04565 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) CDO28_RS04565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS04570 IPR002549 Uncharacterised protein family UPF0118 CDO28_RS04575 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CDO28_RS04575 IPR010918 AIR synthase-related protein, C-terminal domain CDO28_RS04575 IPR016188 PurM, N-terminal-like CDO28_RS04580 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CDO28_RS04580 IPR002376 Formyl transferase, N-terminal CDO28_RS04580 IPR004607 Phosphoribosylglycinamide formyltransferase CDO28_RS04585 IPR010333 Bacterial virulence CDO28_RS04585 IPR011225 Type IV secretory pathway, VirJ component CDO28_RS04585 IPR029058 Alpha/Beta hydrolase fold CDO28_RS04590 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS04590 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CDO28_RS04590 IPR024320 Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156 CDO28_RS04595 IPR000086 NUDIX hydrolase domain CDO28_RS04595 IPR004385 Nucleoside diphosphate pyrophosphatase CDO28_RS04595 IPR015797 NUDIX hydrolase domain-like CDO28_RS04600 IPR006656 Molybdopterin oxidoreductase CDO28_RS04600 IPR006657 Molydopterin dinucleotide-binding domain CDO28_RS04600 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDO28_RS04600 IPR009010 Aspartate decarboxylase-like domain CDO28_RS04605 IPR007473 Ribosomal RNA large subunit methyltransferase J CDO28_RS04605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS04615 IPR001568 Ribonuclease T2-like CDO28_RS04615 IPR018188 Ribonuclease T2, active site CDO28_RS04620 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS04620 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS04620 IPR012336 Thioredoxin-like fold CDO28_RS04625 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CDO28_RS04625 IPR027385 Outer membrane protein beta-barrel CDO28_RS04630 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS04630 IPR016040 NAD(P)-binding domain CDO28_RS04635 IPR000305 GIY-YIG nuclease superfamily CDO28_RS04635 IPR001162 UvrC family homology region CDO28_RS04635 IPR001943 UVR domain CDO28_RS04635 IPR004791 UvrABC system, subunit C CDO28_RS04635 IPR010994 RuvA domain 2-like CDO28_RS04635 IPR027299 GIY-YIG domain CDO28_RS04640 IPR000462 CDP-alcohol phosphatidyltransferase CDO28_RS04640 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CDO28_RS04645 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CDO28_RS04645 IPR010034 Molybdopterin converting factor, subunit 1 CDO28_RS04645 IPR012675 Beta-grasp domain CDO28_RS04645 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDO28_RS04650 IPR003448 Molybdopterin biosynthesis MoaE CDO28_RS04660 IPR001851 ABC transporter, permease CDO28_RS04665 IPR010852 Protein of unknown function DUF1470 CDO28_RS04665 IPR021005 Zinc finger, CGNR CDO28_RS04665 IPR023286 ABATE domain CDO28_RS04675 IPR001564 Nucleoside diphosphate kinase CDO28_RS04675 IPR023005 Nucleoside diphosphate kinase, active site CDO28_RS04680 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS04680 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS04680 IPR012336 Thioredoxin-like fold CDO28_RS04685 IPR007837 DNA damage-inducible protein DinB CDO28_RS04685 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase CDO28_RS04690 IPR000873 AMP-dependent synthetase/ligase CDO28_RS04690 IPR009081 Acyl carrier protein-like CDO28_RS04700 IPR003439 ABC transporter-like CDO28_RS04700 IPR003593 AAA+ ATPase domain CDO28_RS04700 IPR017871 ABC transporter, conserved site CDO28_RS04700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS04700 IPR032524 CDO28_RS04700 CDO28_RS04700 IPR032781 CDO28_RS04700 CDO28_RS04705 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS04710 IPR000683 Oxidoreductase, N-terminal CDO28_RS04710 IPR016040 NAD(P)-binding domain CDO28_RS04720 IPR007459 DNA polymerase III chi subunit, HolC CDO28_RS04725 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CDO28_RS04725 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CDO28_RS04725 IPR011356 Leucine aminopeptidase/peptidase B CDO28_RS04725 IPR023042 Peptidase M17, leucine aminopeptidase CDO28_RS04735 IPR005495 Permease YjgP/YjgQ, predicted CDO28_RS04735 IPR030922 CDO28_RS04735 CDO28_RS04740 IPR005495 Permease YjgP/YjgQ, predicted CDO28_RS04740 IPR030923 CDO28_RS04740 CDO28_RS04745 IPR007543 Organic solvent tolerance protein, C-terminal CDO28_RS04745 IPR020889 Lipopolysaccharide assembly, LptD CDO28_RS04750 IPR027304 Trigger factor/SurA domain CDO28_RS04755 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA CDO28_RS04755 IPR024084 Isopropylmalate dehydrogenase-like domain CDO28_RS04760 IPR001737 Ribosomal RNA adenine methylase transferase CDO28_RS04760 IPR011530 Ribosomal RNA adenine dimethylase CDO28_RS04760 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CDO28_RS04760 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CDO28_RS04760 IPR023165 rRNA adenine dimethylase-like CDO28_RS04760 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS04770 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CDO28_RS04770 IPR017665 Guanylate kinase CDO28_RS04770 IPR020590 Guanylate kinase, conserved site CDO28_RS04770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS04775 IPR005229 Conserved hypothetical protein CHP00255 CDO28_RS04775 IPR013527 YicC-like, N-terminal CDO28_RS04775 IPR013551 Domain of unknown function DUF1732 CDO28_RS04780 IPR003770 Uncharacterised protein family UPF0755, YceG-like CDO28_RS04780 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain CDO28_RS04785 IPR014030 Beta-ketoacyl synthase, N-terminal CDO28_RS04785 IPR014031 Beta-ketoacyl synthase, C-terminal CDO28_RS04785 IPR016039 Thiolase-like CDO28_RS04785 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CDO28_RS04785 IPR018201 Beta-ketoacyl synthase, active site CDO28_RS04785 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDO28_RS04790 IPR003231 Acyl carrier protein (ACP) CDO28_RS04790 IPR006162 Phosphopantetheine attachment site CDO28_RS04790 IPR009081 Acyl carrier protein-like CDO28_RS04795 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS04795 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDO28_RS04795 IPR016040 NAD(P)-binding domain CDO28_RS04795 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS04800 IPR001227 Acyl transferase domain CDO28_RS04800 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CDO28_RS04800 IPR014043 Acyl transferase CDO28_RS04800 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDO28_RS04800 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CDO28_RS04800 IPR020801 Polyketide synthase, acyl transferase domain CDO28_RS04800 IPR024925 Malonyl CoA-acyl carrier protein transacylase CDO28_RS04805 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS04815 IPR000529 Ribosomal protein S6 CDO28_RS04815 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CDO28_RS04815 IPR020814 Ribosomal protein S6, plastid/chloroplast CDO28_RS04820 IPR001648 Ribosomal protein S18 CDO28_RS04820 IPR018275 Ribosomal protein S18, conserved site CDO28_RS04830 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CDO28_RS04830 IPR020069 Ribosomal protein L9, C-terminal CDO28_RS04830 IPR020070 Ribosomal protein L9, N-terminal CDO28_RS04830 IPR020594 Ribosomal protein L9, bacteria/chloroplast CDO28_RS04840 IPR011701 Major facilitator superfamily CDO28_RS04840 IPR020846 Major facilitator superfamily domain CDO28_RS04845 IPR000835 MarR-type HTH domain CDO28_RS04845 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS04845 IPR023187 Transcriptional regulator MarR-type, conserved site CDO28_RS04850 IPR003593 AAA+ ATPase domain CDO28_RS04850 IPR007692 DNA helicase, DnaB type CDO28_RS04850 IPR007693 DNA helicase, DnaB-like, N-terminal CDO28_RS04850 IPR007694 DNA helicase, DnaB-like, C-terminal CDO28_RS04850 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CDO28_RS04850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS04855 IPR008407 Branched-chain amino acid transport, AzlD CDO28_RS04860 IPR011606 Branched-chain amino acid transport, permease CDO28_RS04865 IPR003313 AraC-type arabinose-binding/dimerisation domain CDO28_RS04865 IPR009057 Homeodomain-like CDO28_RS04865 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS04870 IPR000821 Alanine racemase CDO28_RS04870 IPR001608 Alanine racemase, N-terminal CDO28_RS04870 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDO28_RS04870 IPR011079 Alanine racemase, C-terminal CDO28_RS04870 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CDO28_RS04870 IPR029066 PLP-binding barrel CDO28_RS04875 IPR003593 AAA+ ATPase domain CDO28_RS04875 IPR004504 DNA repair protein RadA CDO28_RS04875 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS04875 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS04875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS04880 IPR003825 Colicin V production, CvpA CDO28_RS04885 IPR000836 Phosphoribosyltransferase domain CDO28_RS04885 IPR005854 Amidophosphoribosyl transferase CDO28_RS04885 IPR017932 Glutamine amidotransferase type 2 domain CDO28_RS04885 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS04885 IPR029057 Phosphoribosyltransferase-like CDO28_RS04890 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS04890 IPR016040 NAD(P)-binding domain CDO28_RS04890 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS04895 IPR000462 CDP-alcohol phosphatidyltransferase CDO28_RS04895 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CDO28_RS04895 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal CDO28_RS04900 IPR003817 Phosphatidylserine decarboxylase-related CDO28_RS04900 IPR033175 CDO28_RS04900 CDO28_RS04905 IPR003439 ABC transporter-like CDO28_RS04905 IPR003593 AAA+ ATPase domain CDO28_RS04905 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS04905 IPR017871 ABC transporter, conserved site CDO28_RS04905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS04910 IPR018392 LysM domain CDO28_RS04915 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CDO28_RS04915 IPR031100 CDO28_RS04915 CDO28_RS04920 IPR000620 Drug/metabolite transporter CDO28_RS04920 IPR004626 RarD protein CDO28_RS04925 IPR000891 Pyruvate carboxyltransferase CDO28_RS04925 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CDO28_RS04925 IPR005675 2-isopropylmalate synthase/homocitrate synthase-related CDO28_RS04925 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CDO28_RS04925 IPR013785 Aldolase-type TIM barrel CDO28_RS04930 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS04930 IPR002410 Peptidase S33 CDO28_RS04930 IPR005944 Proline iminopeptidase CDO28_RS04930 IPR029058 Alpha/Beta hydrolase fold CDO28_RS04935 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS04935 IPR011057 Mss4-like CDO28_RS04940 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS04940 IPR011057 Mss4-like CDO28_RS04945 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS04945 IPR011057 Mss4-like CDO28_RS04950 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CDO28_RS04950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS04950 IPR015803 Cysteine-tRNA ligase CDO28_RS04950 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CDO28_RS04950 IPR032678 CDO28_RS04950 CDO28_RS04965 IPR003738 Protein of unknown function DUF159 CDO28_RS04970 IPR000086 NUDIX hydrolase domain CDO28_RS04970 IPR015797 NUDIX hydrolase domain-like CDO28_RS04970 IPR020084 NUDIX hydrolase, conserved site CDO28_RS04970 IPR020476 NUDIX hydrolase CDO28_RS04975 IPR012645 Conserved hypothetical protein CHP02301 CDO28_RS04990 IPR006222 Glycine cleavage T-protein, N-terminal CDO28_RS04990 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDO28_RS04990 IPR017703 YgfZ/GcvT conserved site CDO28_RS04995 IPR006674 HD domain CDO28_RS05000 IPR016130 Protein-tyrosine phosphatase, active site CDO28_RS05000 IPR029021 Protein-tyrosine phosphatase-like CDO28_RS05005 IPR011213 Nicotinic acid mononucleotide biosynthesis protein CDO28_RS05005 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS05005 IPR015797 NUDIX hydrolase domain-like CDO28_RS05010 IPR003996 RTX toxin-activating protein C, bacteria CDO28_RS05015 IPR003997 RTX secretion protein D, Gram-negative bacteria CDO28_RS05015 IPR010129 Type I secretion membrane fusion protein, HlyD CDO28_RS05020 IPR003439 ABC transporter-like CDO28_RS05020 IPR003593 AAA+ ATPase domain CDO28_RS05020 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS05020 IPR017871 ABC transporter, conserved site CDO28_RS05020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS05025 IPR001424 Superoxide dismutase, copper/zinc binding domain CDO28_RS05025 IPR018152 Superoxide dismutase, copper/zinc, binding site CDO28_RS05030 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CDO28_RS05030 IPR004393 Nicotinate-nucleotide pyrophosphorylase CDO28_RS05030 IPR013785 Aldolase-type TIM barrel CDO28_RS05030 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CDO28_RS05030 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CDO28_RS05035 IPR003953 FAD binding domain CDO28_RS05035 IPR005288 L-aspartate oxidase CDO28_RS05035 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CDO28_RS05035 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS05035 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CDO28_RS05035 IPR030664 CDO28_RS05035 CDO28_RS05040 IPR003473 Quinolinate synthetase A CDO28_RS05040 IPR023066 Quinolinate synthase A, type 2 CDO28_RS05045 IPR011701 Major facilitator superfamily CDO28_RS05045 IPR020846 Major facilitator superfamily domain CDO28_RS05050 IPR005302 Molybdenum cofactor sulfurase, C-terminal CDO28_RS05050 IPR005303 MOSC, N-terminal beta barrel CDO28_RS05050 IPR011037 Pyruvate kinase-like, insert domain CDO28_RS05055 IPR003607 HD/PDEase domain CDO28_RS05055 IPR006674 HD domain CDO28_RS05060 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein CDO28_RS05060 IPR019286 Protein of unknown function DUF2339, transmembrane CDO28_RS05065 IPR008557 Protein of unknown function DUF839 CDO28_RS05065 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS05070 IPR003717 Recombination protein O, RecO CDO28_RS05070 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS05070 IPR022572 DNA replication/recombination mediator RecO, N-terminal CDO28_RS05075 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS05080 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS05085 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDO28_RS05085 IPR023393 START-like domain CDO28_RS05090 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS05090 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS05095 IPR008089 Nucleotide sugar epimerase CDO28_RS05095 IPR016040 NAD(P)-binding domain CDO28_RS05100 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CDO28_RS05100 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS05100 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CDO28_RS05100 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CDO28_RS05100 IPR016040 NAD(P)-binding domain CDO28_RS05100 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CDO28_RS05100 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type CDO28_RS05110 IPR003029 Ribosomal protein S1, RNA-binding domain CDO28_RS05110 IPR006641 YqgF/RNase H-like domain CDO28_RS05110 IPR010994 RuvA domain 2-like CDO28_RS05110 IPR012337 Ribonuclease H-like domain CDO28_RS05110 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS05110 IPR018974 Tex-like protein, N-terminal CDO28_RS05110 IPR022967 RNA-binding domain, S1 CDO28_RS05110 IPR023097 Tex RuvX-like domain CDO28_RS05110 IPR023319 Tex-like protein, HTH domain CDO28_RS05110 IPR023323 Tex-like domain CDO28_RS05110 IPR032639 CDO28_RS05110 CDO28_RS05115 IPR003333 Mycolic acid cyclopropane synthase CDO28_RS05115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS05120 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CDO28_RS05120 IPR030395 CDO28_RS05120 CDO28_RS05125 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS05125 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS05130 IPR000425 Major intrinsic protein CDO28_RS05130 IPR023271 Aquaporin-like CDO28_RS05135 IPR006659 Arsenate reductase CDO28_RS05135 IPR006660 Arsenate reductase-like CDO28_RS05135 IPR012336 Thioredoxin-like fold CDO28_RS05140 IPR005025 NADPH-dependent FMN reductase-like CDO28_RS05140 IPR014063 Arsenate resistance ArsH CDO28_RS05140 IPR029039 Flavoprotein-like CDO28_RS05145 IPR004044 K Homology domain, type 2 CDO28_RS05145 IPR005225 Small GTP-binding protein domain CDO28_RS05145 IPR005662 GTP-binding protein Era CDO28_RS05145 IPR006073 GTP binding domain CDO28_RS05145 IPR009019 K homology domain, prokaryotic type CDO28_RS05145 IPR015946 K homology domain-like, alpha/beta CDO28_RS05145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS05150 IPR000999 Ribonuclease III domain CDO28_RS05150 IPR011907 Ribonuclease III CDO28_RS05150 IPR014720 Double-stranded RNA-binding domain CDO28_RS05155 IPR000223 Peptidase S26A, signal peptidase I CDO28_RS05155 IPR015927 Peptidase S24/S26A/S26B/S26C CDO28_RS05155 IPR019533 Peptidase S26 CDO28_RS05155 IPR019756 Peptidase S26A, signal peptidase I, serine active site CDO28_RS05155 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CDO28_RS05155 IPR019758 Peptidase S26A, signal peptidase I, conserved site CDO28_RS05155 IPR019759 Peptidase S24/S26A/S26B CDO28_RS05155 IPR028360 Peptidase S24/S26, beta-ribbon domain CDO28_RS05160 IPR002582 Holo-[acyl carrier protein] synthase CDO28_RS05160 IPR004568 Phosphopantethiene-protein transferase domain CDO28_RS05160 IPR008278 4'-phosphopantetheinyl transferase superfamily CDO28_RS05165 IPR018639 Domain of unknown function DUF2062 CDO28_RS05170 IPR021946 Protein of unknown function DUF3563 CDO28_RS05175 IPR029060 PIN domain-like CDO28_RS05180 IPR007159 AbrB-like domain CDO28_RS05185 IPR002912 ACT domain CDO28_RS05185 IPR003607 HD/PDEase domain CDO28_RS05185 IPR004095 TGS CDO28_RS05185 IPR004811 RelA/SpoT family CDO28_RS05185 IPR007685 RelA/SpoT CDO28_RS05185 IPR012675 Beta-grasp domain CDO28_RS05185 IPR012676 TGS-like CDO28_RS05190 IPR003716 DNA-directed RNA polymerase, omega subunit CDO28_RS05190 IPR006110 RNA polymerase, subunit omega/K/RPB6 CDO28_RS05190 IPR012293 RNA polymerase subunit, RPB6/omega CDO28_RS05195 IPR021139 NYN domain, limkain-b1-type CDO28_RS05195 IPR029060 PIN domain-like CDO28_RS05200 IPR005546 Autotransporter beta-domain CDO28_RS05200 IPR006315 Outer membrane autotransporter barrel CDO28_RS05200 IPR011050 Pectin lyase fold/virulence factor CDO28_RS05200 IPR012332 P22 tailspike C-terminal domain-like CDO28_RS05210 IPR000037 SsrA-binding protein CDO28_RS05210 IPR020081 SsrA-binding protein, conserved site CDO28_RS05210 IPR023620 Small protein B CDO28_RS05215 IPR002220 DapA-like CDO28_RS05215 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CDO28_RS05215 IPR013785 Aldolase-type TIM barrel CDO28_RS05215 IPR020624 Dihydrodipicolinate synthetase, conserved site CDO28_RS05215 IPR020625 Dihydrodipicolinate synthetase, active site CDO28_RS05220 IPR000189 Prokaryotic transglycosylase, active site CDO28_RS05220 IPR008258 Lytic transglycosylase-like SLT domain CDO28_RS05220 IPR008939 Lytic transglycosylase, superhelical U-shaped CDO28_RS05220 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain CDO28_RS05220 IPR023346 Lysozyme-like domain CDO28_RS05225 IPR012413 BA14k family CDO28_RS05230 IPR003684 Porin, alpha proteobacteria type CDO28_RS05230 IPR023614 Porin domain CDO28_RS05235 IPR002104 Integrase, catalytic CDO28_RS05235 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS05235 IPR013762 Integrase-like, catalytic core CDO28_RS05240 IPR003684 Porin, alpha proteobacteria type CDO28_RS05250 IPR007711 Plasmid maintenance system killer CDO28_RS05255 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS05255 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS05255 IPR013430 Toxin-antitoxin system, antidote protein, HigA CDO28_RS05270 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CDO28_RS05270 IPR004839 Aminotransferase, class I/classII CDO28_RS05270 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS05270 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS05270 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS05275 IPR011990 Tetratricopeptide-like helical domain CDO28_RS05280 IPR019223 Domain of unknown function DUF2147 CDO28_RS05285 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS05285 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS05285 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS05285 IPR012336 Thioredoxin-like fold CDO28_RS05300 IPR003844 Uncharacterised protein family UPF0060 CDO28_RS05305 IPR000845 Nucleoside phosphorylase domain CDO28_RS05305 IPR011271 AMP nucleosidase CDO28_RS05305 IPR018953 AMP nucleoside phosphorylase, N-terminal CDO28_RS05310 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CDO28_RS05315 IPR001173 Glycosyltransferase 2-like CDO28_RS05315 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS05325 IPR001206 Diacylglycerol kinase, catalytic domain CDO28_RS05325 IPR016064 ATP-NAD kinase-like domain CDO28_RS05330 IPR002577 Helix-turn-helix, HxlR type CDO28_RS05330 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS05335 IPR011032 GroES (chaperonin 10)-like CDO28_RS05335 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS05335 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 CDO28_RS05335 IPR016040 NAD(P)-binding domain CDO28_RS05335 IPR020843 Polyketide synthase, enoylreductase CDO28_RS05340 IPR000515 MetI-like domain CDO28_RS05345 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CDO28_RS05350 IPR007859 Electron transfer flavoprotein-ubiquinone oxidoreductase CDO28_RS05350 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS05360 IPR013126 Heat shock protein 70 family CDO28_RS05360 IPR018181 Heat shock protein 70, conserved site CDO28_RS05365 IPR005122 Uracil-DNA glycosylase-like CDO28_RS05365 IPR005273 Uracil-DNA glycosylase, family 4 domain CDO28_RS05380 IPR011701 Major facilitator superfamily CDO28_RS05380 IPR020846 Major facilitator superfamily domain CDO28_RS05385 IPR000620 Drug/metabolite transporter CDO28_RS05390 IPR012779 Peptidase M1, alanyl aminopeptidase CDO28_RS05390 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal CDO28_RS05390 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CDO28_RS05395 IPR000014 PAS domain CDO28_RS05395 IPR001610 PAC motif CDO28_RS05395 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS05395 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS05395 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS05395 IPR013655 PAS fold-3 CDO28_RS05400 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain CDO28_RS05400 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CDO28_RS05400 IPR023057 Glutamate-ammonia-ligase adenylyltransferase CDO28_RS05405 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS05405 IPR003660 HAMP linker domain CDO28_RS05405 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS05405 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS05410 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS05410 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS05410 IPR011006 CheY-like superfamily CDO28_RS05410 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS05415 IPR001478 PDZ domain CDO28_RS05415 IPR001940 Peptidase S1C CDO28_RS05415 IPR009003 Trypsin-like cysteine/serine peptidase domain CDO28_RS05415 IPR011782 Peptidase S1C, Do CDO28_RS05420 IPR005616 Cytochrome C biogenesis protein CcmH CDO28_RS05425 IPR002541 Cytochrome c assembly protein CDO28_RS05425 IPR003567 Cytochrome c-type biogenesis protein CDO28_RS05425 IPR003568 Cytochrome c-type biogenesis protein CcmF CDO28_RS05425 IPR032523 CDO28_RS05425 CDO28_RS05430 IPR004329 CcmE/CycJ protein CDO28_RS05430 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS05435 IPR011990 Tetratricopeptide-like helical domain CDO28_RS05435 IPR017560 Cytochrome c-type biogenesis protein CcmI CDO28_RS05440 IPR016364 Surface antigen, Rickettsia CDO28_RS05445 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS05445 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS05450 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS05450 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS05450 IPR011006 CheY-like superfamily CDO28_RS05450 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS05450 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS05465 IPR007351 Uncharacterised protein YjbR CDO28_RS05475 IPR005358 Putative zinc- or iron-chelating domain containing protein CDO28_RS05475 IPR008228 Uncharacterised conserved protein UCP006173 CDO28_RS05480 IPR001264 Glycosyl transferase, family 51 CDO28_RS05480 IPR001460 Penicillin-binding protein, transpeptidase CDO28_RS05480 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS05480 IPR023346 Lysozyme-like domain CDO28_RS05485 IPR010621 Domain of unknown function DUF1214 CDO28_RS05485 IPR012038 Uncharacterised conserved protein UCP009471 CDO28_RS05490 IPR014456 Uncharacterised conserved protein UCP010244, integral membrane protein CDO28_RS05505 IPR003646 SH3-like domain, bacterial-type CDO28_RS05510 IPR019285 Protein of unknown function DUF2336 CDO28_RS05515 IPR009964 Protein of unknown function DUF1491 CDO28_RS05520 IPR002477 Peptidoglycan binding-like CDO28_RS05525 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS05525 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS05525 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS05535 IPR003808 Fe-S metabolism associated domain, SufE-like CDO28_RS05540 IPR008807 ROSMUCR transcriptional regulator CDO28_RS05545 IPR005133 Na+/H+ antiporter subunit G CDO28_RS05550 IPR007208 Na(+)/H(+) antiporter subunit F-like CDO28_RS05555 IPR002758 Na+/H+ antiporter subunit E CDO28_RS05560 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CDO28_RS05560 IPR003918 NADH:ubiquinone oxidoreductase CDO28_RS05565 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CDO28_RS05570 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CDO28_RS05575 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal CDO28_RS05575 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CDO28_RS05575 IPR025383 Domain of unknown function DUF4040 CDO28_RS05580 IPR002579 Peptide methionine sulphoxide reductase MrsB CDO28_RS05580 IPR011057 Mss4-like CDO28_RS05590 IPR004254 Hly-III-related CDO28_RS05595 IPR000962 Zinc finger, DksA/TraR C4-type CDO28_RS05600 IPR006015 Universal stress protein A CDO28_RS05600 IPR006016 UspA CDO28_RS05600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS05605 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS05605 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS05610 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CDO28_RS05610 IPR002470 Peptidase S9A, prolyl oligopeptidase CDO28_RS05610 IPR002471 Peptidase S9, serine active site CDO28_RS05610 IPR023302 Peptidase S9A, N-terminal domain CDO28_RS05610 IPR029058 Alpha/Beta hydrolase fold CDO28_RS05615 IPR012545 Protein of unknown function DUF1697 CDO28_RS05620 IPR003846 Uncharacterised protein family UPF0061 CDO28_RS05625 IPR002372 Pyrrolo-quinoline quinone repeat CDO28_RS05625 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CDO28_RS05625 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related CDO28_RS05625 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDO28_RS05625 IPR027295 Quinonprotein alcohol dehydrogenase-like domain CDO28_RS05630 IPR000871 Beta-lactamase, class-A/D CDO28_RS05630 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS05635 IPR000551 MerR-type HTH domain CDO28_RS05635 IPR009061 DNA binding domain, putative CDO28_RS05640 IPR000182 GNAT domain CDO28_RS05640 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS05645 IPR009056 Cytochrome c-like domain CDO28_RS05650 IPR002321 Cytochrome c, class II CDO28_RS05650 IPR010980 Cytochrome c/b562 CDO28_RS05650 IPR012127 Cytochrome c prime CDO28_RS05650 IPR015984 Cytochrome c prime, subgroup CDO28_RS05655 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS05660 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS05660 IPR013196 Helix-turn-helix, type 11 CDO28_RS05660 IPR026881 WYL domain CDO28_RS05665 IPR001189 Manganese/iron superoxide dismutase CDO28_RS05665 IPR019831 Manganese/iron superoxide dismutase, N-terminal CDO28_RS05665 IPR019832 Manganese/iron superoxide dismutase, C-terminal CDO28_RS05665 IPR019833 Manganese/iron superoxide dismutase, binding site CDO28_RS05670 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS05680 IPR001544 Aminotransferase, class IV CDO28_RS05680 IPR018300 Aminotransferase, class IV, conserved site CDO28_RS05685 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS05685 IPR011032 GroES (chaperonin 10)-like CDO28_RS05685 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS05685 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS05685 IPR016040 NAD(P)-binding domain CDO28_RS05685 IPR020843 Polyketide synthase, enoylreductase CDO28_RS05690 IPR016130 Protein-tyrosine phosphatase, active site CDO28_RS05690 IPR029021 Protein-tyrosine phosphatase-like CDO28_RS05695 IPR006328 Haloacid dehalogenase, type II CDO28_RS05695 IPR006439 HAD hydrolase, subfamily IA CDO28_RS05695 IPR023198 Phosphoglycolate phosphatase, domain 2 CDO28_RS05695 IPR023214 HAD-like domain CDO28_RS05700 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal CDO28_RS05700 IPR023506 Trans-aconitate 2-methyltransferase CDO28_RS05700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS05710 IPR018170 Aldo/keto reductase, conserved site CDO28_RS05710 IPR020471 Aldo/keto reductase subgroup CDO28_RS05710 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS05715 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE CDO28_RS05720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS05720 IPR033186 CDO28_RS05720 CDO28_RS05725 IPR013988 PhnA protein, C-terminal CDO28_RS05730 IPR003718 OsmC/Ohr family CDO28_RS05730 IPR015946 K homology domain-like, alpha/beta CDO28_RS05730 IPR019953 Organic hydroperoxide resistance protein famiy CDO28_RS05735 IPR000835 MarR-type HTH domain CDO28_RS05735 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS05740 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS05745 IPR000014 PAS domain CDO28_RS05745 IPR000160 GGDEF domain CDO28_RS05745 IPR001633 EAL domain CDO28_RS05745 IPR003018 GAF domain CDO28_RS05745 IPR013656 PAS fold-4 CDO28_RS05745 IPR029016 GAF domain-like CDO28_RS05745 IPR029787 Nucleotide cyclase CDO28_RS05750 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS05750 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS05750 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS05750 IPR012336 Thioredoxin-like fold CDO28_RS05755 IPR000847 Transcription regulator HTH, LysR CDO28_RS05755 IPR005119 LysR, substrate-binding CDO28_RS05755 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS05765 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS05765 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS05765 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS05765 IPR012336 Thioredoxin-like fold CDO28_RS05770 IPR010349 L-asparaginase II CDO28_RS05775 IPR022224 Protein of unknown function DUF3750 CDO28_RS05780 IPR011032 GroES (chaperonin 10)-like CDO28_RS05780 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS05780 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS05780 IPR014189 Quinone oxidoreductase PIG3 CDO28_RS05780 IPR016040 NAD(P)-binding domain CDO28_RS05780 IPR020843 Polyketide synthase, enoylreductase CDO28_RS05785 IPR000160 GGDEF domain CDO28_RS05785 IPR001633 EAL domain CDO28_RS05785 IPR029787 Nucleotide cyclase CDO28_RS05790 IPR005325 Protein of unknown function DUF308, membrane CDO28_RS05795 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS05795 IPR009057 Homeodomain-like CDO28_RS05795 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS05795 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS05795 IPR017757 Transcriptional repressor BetI CDO28_RS05800 IPR000917 Sulfatase CDO28_RS05800 IPR017785 Choline-sulfatase CDO28_RS05800 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CDO28_RS05800 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS05800 IPR024607 Sulfatase, conserved site CDO28_RS05800 IPR025863 Choline sulfatase enzyme C-terminal domain CDO28_RS05805 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase CDO28_RS05805 IPR015590 Aldehyde dehydrogenase domain CDO28_RS05805 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS05805 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS05805 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS05805 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS05805 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS05815 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CDO28_RS05815 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CDO28_RS05815 IPR011533 Oxygen-dependent choline dehydrogenase CDO28_RS05815 IPR012132 Glucose-methanol-choline oxidoreductase CDO28_RS05815 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS05830 IPR002500 Phosphoadenosine phosphosulphate reductase CDO28_RS05830 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase CDO28_RS05830 IPR011798 Adenosine 5'-phosphosulphate reductase CDO28_RS05830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS05835 IPR002500 Phosphoadenosine phosphosulphate reductase CDO28_RS05835 IPR011784 Sulphate adenylyltransferase, small subunit CDO28_RS05835 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS05840 IPR000795 Elongation factor, GTP-binding domain CDO28_RS05840 IPR009000 Translation protein, beta-barrel domain CDO28_RS05840 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDO28_RS05840 IPR011779 Sulphate adenylyltransferase, large subunit CDO28_RS05840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS05840 IPR031157 CDO28_RS05840 CDO28_RS05845 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS05845 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS05865 IPR006685 Mechanosensitive ion channel MscS CDO28_RS05865 IPR006686 Mechanosensitive ion channel MscS, conserved site CDO28_RS05865 IPR010920 Like-Sm (LSM) domain CDO28_RS05865 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CDO28_RS05865 IPR011066 Mechanosensitive ion channel MscS, C-terminal CDO28_RS05865 IPR022249 Protein of unknown function DUF3772 CDO28_RS05880 IPR001279 Beta-lactamase-like CDO28_RS05885 IPR010865 Protein of unknown function DUF1499 CDO28_RS05900 IPR000121 PEP-utilising enzyme, C-terminal CDO28_RS05900 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CDO28_RS05900 IPR008279 PEP-utilising enzyme, mobile domain CDO28_RS05900 IPR010121 Pyruvate, phosphate dikinase CDO28_RS05900 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS05900 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS05900 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS05900 IPR018274 PEP-utilising enzyme, active site CDO28_RS05900 IPR023151 PEP-utilising enzyme, conserved site CDO28_RS05905 IPR003395 RecF/RecN/SMC, N-terminal CDO28_RS05905 IPR010935 SMCs flexible hinge CDO28_RS05905 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CDO28_RS05905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS05910 IPR007569 Domain of unknown function DUF559 CDO28_RS05915 IPR012336 Thioredoxin-like fold CDO28_RS05920 IPR007922 Protein of unknown function DUF721/UPF0232 CDO28_RS05920 IPR010593 Protein of unknown function DUF1159 CDO28_RS05925 IPR000445 Helix-hairpin-helix motif CDO28_RS05925 IPR003265 HhH-GPD domain CDO28_RS05925 IPR004035 Endonuclease III, iron-sulphur binding site CDO28_RS05925 IPR004036 Endonuclease III-like, conserved site-2 CDO28_RS05925 IPR005760 A/G-specific adenine glycosylase MutY CDO28_RS05925 IPR011257 DNA glycosylase CDO28_RS05925 IPR015797 NUDIX hydrolase domain-like CDO28_RS05925 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CDO28_RS05925 IPR029119 MutY, C-terminal CDO28_RS05930 IPR006439 HAD hydrolase, subfamily IA CDO28_RS05930 IPR023214 HAD-like domain CDO28_RS05935 IPR001091 Restriction/modification DNA-methylase CDO28_RS05935 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDO28_RS05935 IPR002941 DNA methylase N-4/N-6 CDO28_RS05935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS05940 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS05940 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS05945 IPR006439 HAD hydrolase, subfamily IA CDO28_RS05945 IPR023198 Phosphoglycolate phosphatase, domain 2 CDO28_RS05945 IPR023214 HAD-like domain CDO28_RS05950 IPR000709 Leu/Ile/Val-binding protein CDO28_RS05950 IPR028081 Leucine-binding protein domain CDO28_RS05950 IPR028082 Periplasmic binding protein-like I CDO28_RS05960 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CDO28_RS05960 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDO28_RS05960 IPR004450 Threonine synthase-like CDO28_RS05960 IPR029144 Threonine synthase, N-terminal CDO28_RS05965 IPR001431 Peptidase M16, zinc-binding site CDO28_RS05965 IPR007863 Peptidase M16, C-terminal domain CDO28_RS05965 IPR011237 Peptidase M16 domain CDO28_RS05965 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CDO28_RS05965 IPR011765 Peptidase M16, N-terminal CDO28_RS05970 IPR000182 GNAT domain CDO28_RS05970 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS05975 IPR000014 PAS domain CDO28_RS05975 IPR000160 GGDEF domain CDO28_RS05975 IPR001610 PAC motif CDO28_RS05975 IPR001633 EAL domain CDO28_RS05975 IPR011622 7TM-DISM receptor, extracellular domain, type 2 CDO28_RS05975 IPR013655 PAS fold-3 CDO28_RS05975 IPR029787 Nucleotide cyclase CDO28_RS05980 IPR003774 Protein of unknown function UPF0301 CDO28_RS05985 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CDO28_RS05990 IPR012336 Thioredoxin-like fold CDO28_RS05990 IPR013740 Redoxin CDO28_RS05995 IPR002156 Ribonuclease H domain CDO28_RS05995 IPR012337 Ribonuclease H-like domain CDO28_RS05995 IPR022892 Ribonuclease H CDO28_RS06000 IPR002575 Aminoglycoside phosphotransferase CDO28_RS06000 IPR005280 Homoserine kinase ThrB CDO28_RS06000 IPR011009 Protein kinase-like domain CDO28_RS06005 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CDO28_RS06010 IPR002994 Surfeit locus 1/Shy1 CDO28_RS06015 IPR009325 Protein of unknown function DUF983 CDO28_RS06025 IPR000298 Cytochrome c oxidase subunit III domain CDO28_RS06025 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CDO28_RS06030 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 CDO28_RS06030 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain CDO28_RS06040 IPR000537 UbiA prenyltransferase family CDO28_RS06040 IPR006369 Protohaem IX farnesyltransferase CDO28_RS06040 IPR030470 CDO28_RS06040 CDO28_RS06045 IPR000883 Cytochrome c oxidase subunit I CDO28_RS06045 IPR014241 Cytochrome c oxidase, subunit I bacterial type CDO28_RS06045 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDO28_RS06045 IPR023616 Cytochrome c oxidase, subunit I domain CDO28_RS06050 IPR001505 Copper centre Cu(A) CDO28_RS06050 IPR002429 Cytochrome c oxidase subunit II C-terminal CDO28_RS06050 IPR008972 Cupredoxin CDO28_RS06050 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CDO28_RS06050 IPR014222 Cytochrome c oxidase, subunit II CDO28_RS06060 IPR010642 Invasion protein B CDO28_RS06065 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CDO28_RS06065 IPR017945 DHBP synthase RibB-like alpha/beta domain CDO28_RS06065 IPR032677 CDO28_RS06065 CDO28_RS06070 IPR000453 Chorismate synthase CDO28_RS06070 IPR020541 Chorismate synthase, conserved site CDO28_RS06075 IPR009780 Protein of unknown function DUF1344 CDO28_RS06080 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CDO28_RS06080 IPR013078 Histidine phosphatase superfamily, clade-1 CDO28_RS06080 IPR029033 Histidine phosphatase superfamily CDO28_RS06085 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS06085 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CDO28_RS06085 IPR016040 NAD(P)-binding domain CDO28_RS06090 IPR001623 DnaJ domain CDO28_RS06090 IPR002939 Chaperone DnaJ, C-terminal CDO28_RS06090 IPR008971 HSP40/DnaJ peptide-binding CDO28_RS06090 IPR018253 DnaJ domain, conserved site CDO28_RS06095 IPR032635 CDO28_RS06095 CDO28_RS06100 IPR000659 Pyridoxamine 5'-phosphate oxidase CDO28_RS06100 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain CDO28_RS06100 IPR012349 FMN-binding split barrel CDO28_RS06100 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal CDO28_RS06100 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site CDO28_RS06105 IPR002509 Polysaccharide deacetylase CDO28_RS06105 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS06110 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CDO28_RS06110 IPR007730 Sporulation-related domain CDO28_RS06110 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS06110 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CDO28_RS06115 IPR002510 TldD/PmbA CDO28_RS06115 IPR025502 TldD CDO28_RS06120 IPR009351 Protein of unknown function DUF1006 CDO28_RS06125 IPR003439 ABC transporter-like CDO28_RS06125 IPR003593 AAA+ ATPase domain CDO28_RS06125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS06130 IPR003339 ABC/ECF transporter, transmembrane component CDO28_RS06135 IPR003784 BioY protein CDO28_RS06140 IPR000873 AMP-dependent synthetase/ligase CDO28_RS06140 IPR020845 AMP-binding, conserved site CDO28_RS06140 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS06145 IPR002155 Thiolase CDO28_RS06145 IPR016039 Thiolase-like CDO28_RS06145 IPR020613 Thiolase, conserved site CDO28_RS06145 IPR020616 Thiolase, N-terminal CDO28_RS06145 IPR020617 Thiolase, C-terminal CDO28_RS06150 IPR029069 HotDog domain CDO28_RS06155 IPR011032 GroES (chaperonin 10)-like CDO28_RS06155 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS06155 IPR016040 NAD(P)-binding domain CDO28_RS06155 IPR020843 Polyketide synthase, enoylreductase CDO28_RS06160 IPR000286 Histone deacetylase superfamily CDO28_RS06160 IPR023801 Histone deacetylase domain CDO28_RS06165 IPR003761 Exonuclease VII, small subunit CDO28_RS06170 IPR003829 Pirin, N-terminal domain CDO28_RS06170 IPR008778 Pirin, C-terminal domain CDO28_RS06170 IPR011051 RmlC-like cupin domain CDO28_RS06170 IPR012093 Pirin CDO28_RS06170 IPR014710 RmlC-like jelly roll fold CDO28_RS06175 IPR005474 Transketolase, N-terminal CDO28_RS06175 IPR005475 Transketolase-like, pyrimidine-binding domain CDO28_RS06175 IPR005477 Deoxyxylulose-5-phosphate synthase CDO28_RS06175 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CDO28_RS06175 IPR020826 Transketolase binding site CDO28_RS06175 IPR029061 Thiamin diphosphate-binding fold CDO28_RS06175 IPR033248 CDO28_RS06175 CDO28_RS06180 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CDO28_RS06180 IPR002942 RNA-binding S4 domain CDO28_RS06180 IPR004538 Haemolysin A CDO28_RS06180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS06185 IPR010280 (Uracil-5)-methyltransferase family CDO28_RS06185 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS06185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS06185 IPR030390 CDO28_RS06185 CDO28_RS06190 IPR003660 HAMP linker domain CDO28_RS06190 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDO28_RS06190 IPR029151 Periplasmic sensor domain-like CDO28_RS06190 IPR033479 CDO28_RS06190 CDO28_RS06200 IPR001753 Crotonase superfamily CDO28_RS06200 IPR029045 ClpP/crotonase-like domain CDO28_RS06205 IPR006089 Acyl-CoA dehydrogenase, conserved site CDO28_RS06205 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDO28_RS06205 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDO28_RS06205 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CDO28_RS06205 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDO28_RS06205 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDO28_RS06210 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CDO28_RS06220 IPR012413 BA14k family CDO28_RS06225 IPR002053 Glycoside hydrolase, family 25 CDO28_RS06225 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS06225 IPR017853 Glycoside hydrolase, superfamily CDO28_RS06230 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS06230 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDO28_RS06230 IPR001834 NADH:cytochrome b5 reductase (CBR) CDO28_RS06230 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS06230 IPR008333 Oxidoreductase, FAD-binding domain CDO28_RS06230 IPR012675 Beta-grasp domain CDO28_RS06230 IPR017938 Riboflavin synthase-like beta-barrel CDO28_RS06235 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CDO28_RS06235 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CDO28_RS06235 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS06245 IPR005145 Putative GTP-binding controlling metal-binding domain CDO28_RS06245 IPR006070 YrdC-like domain CDO28_RS06245 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CDO28_RS06245 IPR017945 DHBP synthase RibB-like alpha/beta domain CDO28_RS06250 IPR004113 FAD-linked oxidase, C-terminal CDO28_RS06250 IPR006094 FAD linked oxidase, N-terminal CDO28_RS06250 IPR016164 FAD-linked oxidase-like, C-terminal CDO28_RS06250 IPR016166 FAD-binding, type 2 CDO28_RS06250 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS06250 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS06250 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDO28_RS06255 IPR010626 Protein of unknown function DUF1217 CDO28_RS06255 IPR023157 AGR-C-984p-like domain CDO28_RS06265 IPR000537 UbiA prenyltransferase family CDO28_RS06265 IPR006370 4-hydroxybenzoate polyprenyl transferase CDO28_RS06265 IPR030470 CDO28_RS06265 CDO28_RS06265 IPR031103 CDO28_RS06265 CDO28_RS06270 IPR010583 MltA-interacting MipA CDO28_RS06275 IPR003313 AraC-type arabinose-binding/dimerisation domain CDO28_RS06275 IPR009057 Homeodomain-like CDO28_RS06275 IPR011051 RmlC-like cupin domain CDO28_RS06275 IPR014710 RmlC-like jelly roll fold CDO28_RS06275 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS06280 IPR011701 Major facilitator superfamily CDO28_RS06280 IPR020846 Major facilitator superfamily domain CDO28_RS06285 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CDO28_RS06290 IPR000160 GGDEF domain CDO28_RS06290 IPR001633 EAL domain CDO28_RS06290 IPR029787 Nucleotide cyclase CDO28_RS06295 IPR000115 Phosphoribosylglycinamide synthetase CDO28_RS06295 IPR011054 Rudiment single hybrid motif CDO28_RS06295 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS06295 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS06295 IPR016185 Pre-ATP-grasp domain CDO28_RS06295 IPR020559 Phosphoribosylglycinamide synthetase, conserved site CDO28_RS06295 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CDO28_RS06295 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDO28_RS06295 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CDO28_RS06305 IPR007553 Domain of unknown function DUF523 CDO28_RS06310 IPR008909 DALR anticodon binding CDO28_RS06310 IPR015944 Glycine-tRNA ligase, beta subunit CDO28_RS06315 IPR018702 Protein of unknown function DUF2207, membrane CDO28_RS06320 IPR007156 LemA CDO28_RS06320 IPR023353 LemA-like domain CDO28_RS06330 IPR002310 Glycine-tRNA ligase, alpha subunit CDO28_RS06340 IPR001907 ATP-dependent Clp protease proteolytic subunit CDO28_RS06340 IPR002142 Peptidase S49 CDO28_RS06340 IPR029045 ClpP/crotonase-like domain CDO28_RS06345 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDO28_RS06345 IPR007848 Methyltransferase small domain CDO28_RS06345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS06350 IPR007864 Urease accessory protein UreE, C-terminal domain CDO28_RS06350 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDO28_RS06350 IPR018551 Domain of unknown function DUF2007 CDO28_RS06355 IPR000092 Polyprenyl synthetase CDO28_RS06355 IPR008949 Terpenoid synthase CDO28_RS06360 IPR001440 Tetratricopeptide TPR1 CDO28_RS06360 IPR011990 Tetratricopeptide-like helical domain CDO28_RS06360 IPR019734 Tetratricopeptide repeat CDO28_RS06365 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CDO28_RS06365 IPR006204 GHMP kinase N-terminal domain CDO28_RS06365 IPR013750 GHMP kinase, C-terminal domain CDO28_RS06365 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS06365 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS06370 IPR001453 Molybdopterin binding domain CDO28_RS06370 IPR008284 Molybdenum cofactor biosynthesis, conserved site CDO28_RS06370 IPR012245 Molybdenum cofactor biosynthesis protein MoaB CDO28_RS06370 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria CDO28_RS06380 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS06385 IPR006638 Elongator protein 3/MiaB/NifB CDO28_RS06385 IPR007197 Radical SAM CDO28_RS06385 IPR013785 Aldolase-type TIM barrel CDO28_RS06390 IPR012337 Ribonuclease H-like domain CDO28_RS06390 IPR022898 Ribonuclease HII CDO28_RS06390 IPR024567 Ribonuclease HII/HIII domain CDO28_RS06400 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast CDO28_RS06405 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast CDO28_RS06410 IPR000454 ATPase, F0 complex, subunit C CDO28_RS06410 IPR002379 V-ATPase proteolipid subunit C-like domain CDO28_RS06415 IPR000568 ATPase, F0 complex, subunit A CDO28_RS06415 IPR023011 ATPase, F0 complex, subunit A, active site CDO28_RS06420 IPR032820 CDO28_RS06420 CDO28_RS06425 IPR011105 Cell wall hydrolase, SleB CDO28_RS06430 IPR003855 K+ potassium transporter CDO28_RS06430 IPR023051 Potassium uptake protein, low affinity, Kup CDO28_RS06435 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CDO28_RS06440 IPR000808 Mrp, conserved site CDO28_RS06440 IPR002744 Domain of unknown function DUF59 CDO28_RS06440 IPR019591 Mrp/NBP35 ATP-binding protein CDO28_RS06440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS06445 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS06445 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CDO28_RS06445 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS06445 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS06450 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS06450 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CDO28_RS06450 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS06450 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS06455 IPR005471 Transcription regulator IclR, N-terminal CDO28_RS06455 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS06455 IPR014757 Transcription regulator IclR, C-terminal CDO28_RS06455 IPR029016 GAF domain-like CDO28_RS06460 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS06460 IPR016040 NAD(P)-binding domain CDO28_RS06460 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS06465 IPR007729 2-keto-3-deoxy-galactonokinase CDO28_RS06470 IPR000887 KDPG/KHG aldolase CDO28_RS06470 IPR013785 Aldolase-type TIM barrel CDO28_RS06470 IPR031338 CDO28_RS06470 CDO28_RS06475 IPR005511 Senescence marker protein-30 (SMP-30) CDO28_RS06475 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS06475 IPR013658 SMP-30/Gluconolactonase/LRE-like region CDO28_RS06480 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CDO28_RS06480 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDO28_RS06480 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CDO28_RS06490 IPR011033 PRC-barrel-like CDO28_RS06490 IPR027275 PRC-barrel domain CDO28_RS06495 IPR010426 Trimethylamine methyltransferase CDO28_RS06500 IPR000847 Transcription regulator HTH, LysR CDO28_RS06500 IPR005119 LysR, substrate-binding CDO28_RS06500 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS06505 IPR000160 GGDEF domain CDO28_RS06505 IPR001633 EAL domain CDO28_RS06505 IPR029787 Nucleotide cyclase CDO28_RS06510 IPR000014 PAS domain CDO28_RS06510 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS06510 IPR011006 CheY-like superfamily CDO28_RS06510 IPR013656 PAS fold-4 CDO28_RS06515 IPR002099 DNA mismatch repair protein family CDO28_RS06515 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS06515 IPR013507 DNA mismatch repair protein, C-terminal CDO28_RS06515 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS06515 IPR014762 DNA mismatch repair, conserved site CDO28_RS06515 IPR014790 MutL, C-terminal, dimerisation CDO28_RS06515 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS06515 IPR020667 DNA mismatch repair protein, MutL CDO28_RS06520 IPR018661 Protein of unknown function DUF2093 CDO28_RS06530 IPR003758 Tetraacyldisaccharide 4'-kinase CDO28_RS06530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS06535 IPR006439 HAD hydrolase, subfamily IA CDO28_RS06535 IPR023214 HAD-like domain CDO28_RS06540 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal CDO28_RS06545 IPR025226 Protein of unknown function DUF4170 CDO28_RS06550 IPR000760 Inositol monophosphatase CDO28_RS06550 IPR020550 Inositol monophosphatase, conserved site CDO28_RS06555 IPR002510 TldD/PmbA CDO28_RS06560 IPR003148 Regulator of K+ conductance, N-terminal CDO28_RS06560 IPR004771 K+/H+ exchanger CDO28_RS06560 IPR006153 Cation/H+ exchanger CDO28_RS06560 IPR016040 NAD(P)-binding domain CDO28_RS06565 IPR011660 Rv0623-like transcription factor CDO28_RS06570 IPR002716 PIN domain CDO28_RS06570 IPR022907 VapC family CDO28_RS06570 IPR029060 PIN domain-like CDO28_RS06575 IPR002641 Patatin/Phospholipase A2-related CDO28_RS06575 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDO28_RS06580 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDO28_RS06580 IPR004398 RNA methyltransferase, RsmD CDO28_RS06580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS06585 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CDO28_RS06585 IPR002942 RNA-binding S4 domain CDO28_RS06585 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CDO28_RS06585 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CDO28_RS06585 IPR020103 Pseudouridine synthase, catalytic domain CDO28_RS06590 IPR016192 APOBEC/CMP deaminase, zinc-binding CDO28_RS06590 IPR016193 Cytidine deaminase-like CDO28_RS06590 IPR028883 tRNA-specific adenosine deaminase CDO28_RS06595 IPR000182 GNAT domain CDO28_RS06595 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS06605 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDO28_RS06605 IPR002300 Aminoacyl-tRNA synthetase, class Ia CDO28_RS06605 IPR002301 Isoleucine-tRNA ligase CDO28_RS06605 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CDO28_RS06605 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CDO28_RS06605 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CDO28_RS06605 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS06605 IPR023585 Isoleucine-tRNA ligase, type 1 CDO28_RS06610 IPR002606 Riboflavin kinase, bacterial CDO28_RS06610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS06610 IPR015864 FAD synthetase CDO28_RS06610 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CDO28_RS06610 IPR023465 Riboflavin kinase domain CDO28_RS06615 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 CDO28_RS06615 IPR006357 HAD-superfamily hydrolase, subfamily IIA CDO28_RS06615 IPR023214 HAD-like domain CDO28_RS06615 IPR023215 Nitrophenylphosphatase-like domain CDO28_RS06620 IPR001763 Rhodanese-like domain CDO28_RS06620 IPR018634 Chromate resistance exported protein CDO28_RS06625 IPR011032 GroES (chaperonin 10)-like CDO28_RS06625 IPR018369 Chaperonin Cpn10, conserved site CDO28_RS06625 IPR020818 Chaperonin Cpn10 CDO28_RS06630 IPR001844 Chaperonin Cpn60 CDO28_RS06630 IPR002423 Chaperonin Cpn60/TCP-1 CDO28_RS06630 IPR018370 Chaperonin Cpn60, conserved site CDO28_RS06630 IPR027409 GroEL-like apical domain CDO28_RS06630 IPR027413 GroEL-like equatorial domain CDO28_RS06640 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS06640 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS06640 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS06640 IPR028202 Reductase, C-terminal CDO28_RS06645 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS06645 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS06645 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS06645 IPR012336 Thioredoxin-like fold CDO28_RS06650 IPR013820 ATP phosphoribosyltransferase, catalytic domain CDO28_RS06650 IPR018198 ATP phosphoribosyltransferase, conserved site CDO28_RS06650 IPR024893 ATP phosphoribosyltransferase HisG, short form CDO28_RS06655 IPR004517 ATP phosphoribosyltransferase regulatory subunit CDO28_RS06660 IPR004154 Anticodon-binding CDO28_RS06660 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CDO28_RS06660 IPR015807 Histidine-tRNA ligase CDO28_RS06670 IPR005183 Domain of unknown function DUF305 CDO28_RS06670 IPR012347 Ferritin-related CDO28_RS06675 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin CDO28_RS06680 IPR005019 Methyladenine glycosylase CDO28_RS06680 IPR011257 DNA glycosylase CDO28_RS06685 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS06690 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS06695 IPR004017 Cysteine-rich domain CDO28_RS06695 IPR012257 Glycolate oxidase, iron-sulphur subunit CDO28_RS06695 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS06695 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS06700 IPR006094 FAD linked oxidase, N-terminal CDO28_RS06700 IPR016164 FAD-linked oxidase-like, C-terminal CDO28_RS06700 IPR016166 FAD-binding, type 2 CDO28_RS06700 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS06700 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS06700 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDO28_RS06705 IPR004113 FAD-linked oxidase, C-terminal CDO28_RS06705 IPR006094 FAD linked oxidase, N-terminal CDO28_RS06705 IPR013785 Aldolase-type TIM barrel CDO28_RS06705 IPR016164 FAD-linked oxidase-like, C-terminal CDO28_RS06705 IPR016166 FAD-binding, type 2 CDO28_RS06705 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS06705 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS06705 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDO28_RS06710 IPR000847 Transcription regulator HTH, LysR CDO28_RS06710 IPR005119 LysR, substrate-binding CDO28_RS06710 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS06715 IPR021830 Protein of unknown function DUF3422 CDO28_RS06720 IPR000524 Transcription regulator HTH, GntR CDO28_RS06720 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS06720 IPR011711 GntR, C-terminal CDO28_RS06720 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS06725 IPR000086 NUDIX hydrolase domain CDO28_RS06725 IPR015797 NUDIX hydrolase domain-like CDO28_RS06730 IPR001204 Phosphate transporter CDO28_RS06735 IPR006700 Ribosomal RNA small subunit methyltransferase E CDO28_RS06735 IPR015947 PUA-like domain CDO28_RS06735 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDO28_RS06735 IPR029028 Alpha/beta knot methyltransferases CDO28_RS06740 IPR006336 Glutamate--cysteine ligase, GCS2 CDO28_RS06740 IPR011556 Glutamate--cysteine ligase, plant CDO28_RS06745 IPR009282 Protein of unknown function DUF937 CDO28_RS06750 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS06755 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative CDO28_RS06760 IPR009506 Protein of unknown function DUF1127 CDO28_RS06765 IPR000847 Transcription regulator HTH, LysR CDO28_RS06765 IPR005119 LysR, substrate-binding CDO28_RS06765 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS06770 IPR002226 Catalase haem-binding site CDO28_RS06770 IPR010582 Catalase immune-responsive domain CDO28_RS06770 IPR011614 Catalase core domain CDO28_RS06770 IPR018028 Catalase, mono-functional, haem-containing CDO28_RS06770 IPR020835 Catalase-like domain CDO28_RS06770 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CDO28_RS06775 IPR000847 Transcription regulator HTH, LysR CDO28_RS06775 IPR005119 LysR, substrate-binding CDO28_RS06775 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS06780 IPR002925 Dienelactone hydrolase CDO28_RS06780 IPR029058 Alpha/Beta hydrolase fold CDO28_RS06785 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CDO28_RS06785 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CDO28_RS06790 IPR000644 CBS domain CDO28_RS06790 IPR001093 IMP dehydrogenase/GMP reductase CDO28_RS06790 IPR005990 Inosine-5'-monophosphate dehydrogenase CDO28_RS06790 IPR013785 Aldolase-type TIM barrel CDO28_RS06790 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CDO28_RS06795 IPR001279 Beta-lactamase-like CDO28_RS06800 IPR004638 Drug resistance transporter EmrB/QacA subfamily CDO28_RS06800 IPR011701 Major facilitator superfamily CDO28_RS06800 IPR020846 Major facilitator superfamily domain CDO28_RS06805 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS06805 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS06810 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CDO28_RS06810 IPR015507 Ribosomal RNA large subunit methyltransferase E CDO28_RS06810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS06815 IPR003695 Ppx/GppA phosphatase CDO28_RS06835 IPR003370 Chromate transporter CDO28_RS06835 IPR014047 Chromate transporter, long chain CDO28_RS06840 IPR011701 Major facilitator superfamily CDO28_RS06840 IPR020846 Major facilitator superfamily domain CDO28_RS06850 IPR009642 Protein of unknown function DUF1236 CDO28_RS06855 IPR002372 Pyrrolo-quinoline quinone repeat CDO28_RS06855 IPR015943 WD40/YVTN repeat-like-containing domain CDO28_RS06860 IPR011990 Tetratricopeptide-like helical domain CDO28_RS06860 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS06865 IPR010296 Protein of unknown function DUF899, thioredoxin-like CDO28_RS06865 IPR012336 Thioredoxin-like fold CDO28_RS06875 IPR014587 Uncharacterised conserved protein UCP034077 CDO28_RS06890 IPR003416 MgtC/SapB/SrpB transporter CDO28_RS06900 IPR006076 FAD dependent oxidoreductase CDO28_RS06900 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS06905 IPR009760 Protein of unknown function DUF1328 CDO28_RS06925 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS06925 IPR011006 CheY-like superfamily CDO28_RS06925 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS06925 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS06925 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS06925 IPR014605 Signal transduction response regulator, PhyR-like, C-terminal, alphaproteobacteria CDO28_RS06930 IPR002549 Uncharacterised protein family UPF0118 CDO28_RS06940 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS06940 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS06945 IPR003439 ABC transporter-like CDO28_RS06945 IPR003593 AAA+ ATPase domain CDO28_RS06945 IPR017871 ABC transporter, conserved site CDO28_RS06945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS06950 IPR003439 ABC transporter-like CDO28_RS06950 IPR003593 AAA+ ATPase domain CDO28_RS06950 IPR017871 ABC transporter, conserved site CDO28_RS06950 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS06955 IPR000515 MetI-like domain CDO28_RS06955 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDO28_RS06960 IPR000515 MetI-like domain CDO28_RS06965 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS06965 IPR030678 CDO28_RS06965 CDO28_RS06970 IPR000944 Transcription regulator Rrf2-like CDO28_RS06970 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS06970 IPR030489 CDO28_RS06970 CDO28_RS06975 IPR026045 Ferric binding protein CDO28_RS06980 IPR001915 Peptidase M48 CDO28_RS06985 IPR010295 Protein of unknown function DUF898 CDO28_RS06990 IPR010061 Methylmalonate-semialdehyde dehydrogenase CDO28_RS06990 IPR015590 Aldehyde dehydrogenase domain CDO28_RS06990 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS06990 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS06990 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS06990 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS06995 IPR000847 Transcription regulator HTH, LysR CDO28_RS06995 IPR005119 LysR, substrate-binding CDO28_RS06995 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS07000 IPR006094 FAD linked oxidase, N-terminal CDO28_RS07000 IPR007173 D-arabinono-1,4-lactone oxidase CDO28_RS07000 IPR016166 FAD-binding, type 2 CDO28_RS07000 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS07000 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS07005 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS07005 IPR016040 NAD(P)-binding domain CDO28_RS07015 IPR010234 Phasin, subfamily 2 CDO28_RS07015 IPR018968 Phasin CDO28_RS07020 IPR000014 PAS domain CDO28_RS07020 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS07020 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS07020 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS07020 IPR013767 PAS fold CDO28_RS07025 IPR000515 MetI-like domain CDO28_RS07030 IPR000873 AMP-dependent synthetase/ligase CDO28_RS07030 IPR005914 Acetoacetyl-CoA synthase CDO28_RS07030 IPR020845 AMP-binding, conserved site CDO28_RS07030 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS07035 IPR032712 CDO28_RS07035 CDO28_RS07040 IPR000515 MetI-like domain CDO28_RS07045 IPR000515 MetI-like domain CDO28_RS07050 IPR003439 ABC transporter-like CDO28_RS07050 IPR003593 AAA+ ATPase domain CDO28_RS07050 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CDO28_RS07050 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS07050 IPR013611 Transport-associated OB, type 2 CDO28_RS07050 IPR017871 ABC transporter, conserved site CDO28_RS07050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS07055 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CDO28_RS07060 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS07060 IPR010359 Protein of unknown function DUF955 CDO28_RS07060 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS07060 IPR018653 Domain of unknown function DUF2083,transcriptional regulator CDO28_RS07060 IPR026281 HTH type transcriptional regulator Rv0465c/Mt0481 CDO28_RS07065 IPR006254 Isocitrate lyase CDO28_RS07065 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS07065 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site CDO28_RS07075 IPR000847 Transcription regulator HTH, LysR CDO28_RS07075 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS07085 IPR003660 HAMP linker domain CDO28_RS07085 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDO28_RS07095 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CDO28_RS07095 IPR023166 HI0933 insert-like domain CDO28_RS07095 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS07100 IPR008146 Glutamine synthetase, catalytic domain CDO28_RS07100 IPR008147 Glutamine synthetase, beta-Grasp CDO28_RS07100 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDO28_RS07100 IPR027303 Glutamine synthetase, glycine-rich site CDO28_RS07105 IPR006076 FAD dependent oxidoreductase CDO28_RS07105 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS07110 IPR001282 Glucose-6-phosphate dehydrogenase CDO28_RS07110 IPR016040 NAD(P)-binding domain CDO28_RS07110 IPR019796 Glucose-6-phosphate dehydrogenase, active site CDO28_RS07110 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CDO28_RS07110 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CDO28_RS07115 IPR005900 6-phosphogluconolactonase, DevB-type CDO28_RS07115 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CDO28_RS07120 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CDO28_RS07120 IPR004786 6-phosphogluconate dehydratase CDO28_RS07120 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDO28_RS07120 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CDO28_RS07125 IPR002559 Transposase, IS4-like CDO28_RS07125 IPR012337 Ribonuclease H-like domain CDO28_RS07125 IPR014736 Transposase, Tn5-like, core CDO28_RS07125 IPR025399 Domain of unknown function DUF4372 CDO28_RS07140 IPR003439 ABC transporter-like CDO28_RS07140 IPR003593 AAA+ ATPase domain CDO28_RS07140 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS07140 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS07140 IPR013611 Transport-associated OB, type 2 CDO28_RS07140 IPR017871 ABC transporter, conserved site CDO28_RS07140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS07145 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CDO28_RS07145 IPR013780 Glycosyl hydrolase, family 13, all-beta CDO28_RS07145 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS07145 IPR017853 Glycoside hydrolase, superfamily CDO28_RS07150 IPR000515 MetI-like domain CDO28_RS07155 IPR000515 MetI-like domain CDO28_RS07160 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS07165 IPR000843 Transcription regulator HTH, LacI CDO28_RS07165 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS07165 IPR028082 Periplasmic binding protein-like I CDO28_RS07170 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CDO28_RS07170 IPR016040 NAD(P)-binding domain CDO28_RS07170 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDO28_RS07170 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDO28_RS07170 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CDO28_RS07175 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS07190 IPR019301 Flagellar protein FlgJ, N-terminal CDO28_RS07200 IPR002010 Type III secretion system inner membrane R protein CDO28_RS07200 IPR006303 Flagellar biosynthesis protein FliR CDO28_RS07205 IPR001712 Type III secretion system FHIPEP CDO28_RS07205 IPR006301 Flagellar biosynthesis protein FlhA CDO28_RS07210 IPR002191 Bacterial export protein family 3 CDO28_RS07215 IPR005648 Flagellar hook capping protein CDO28_RS07220 IPR009967 Flagellum biosynthesis repressor FlbT CDO28_RS07225 IPR010845 Flagellar FlaF CDO28_RS07230 IPR001029 Flagellin, D0/D1 domain CDO28_RS07235 IPR002371 Flagellar hook-associated protein, FlgK CDO28_RS07235 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDO28_RS07240 IPR001444 Flagellar basal body rod protein, N-terminal CDO28_RS07240 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDO28_RS07240 IPR011491 Flagellar basal body FlaE CDO28_RS07240 IPR019776 Flagellar basal body rod protein, conserved site CDO28_RS07240 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CDO28_RS07245 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS07245 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS07245 IPR011006 CheY-like superfamily CDO28_RS07245 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS07245 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS07250 IPR008258 Lytic transglycosylase-like SLT domain CDO28_RS07250 IPR023346 Lysozyme-like domain CDO28_RS07255 IPR021136 Flagellar hook-length control protein-like, C-terminal CDO28_RS07265 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CDO28_RS07265 IPR025713 Motility protein B, N-terminal domain CDO28_RS07275 IPR001029 Flagellin, D0/D1 domain CDO28_RS07275 IPR001492 Flagellin CDO28_RS07280 IPR001029 Flagellin, D0/D1 domain CDO28_RS07280 IPR001492 Flagellin CDO28_RS07285 IPR001029 Flagellin, D0/D1 domain CDO28_RS07285 IPR001492 Flagellin CDO28_RS07290 IPR001029 Flagellin, D0/D1 domain CDO28_RS07290 IPR001492 Flagellin CDO28_RS07295 IPR005837 Flagellar transport protein FliP CDO28_RS07295 IPR005838 Type III secretion system inner membrane P protein CDO28_RS07300 IPR005503 Flagellar basal body-associated protein FliL CDO28_RS07305 IPR000527 Flagellar L-ring protein CDO28_RS07310 IPR011002 Flagellar motor switch protein FliG, alpha-helical CDO28_RS07315 IPR001782 Flagellar P-ring protein CDO28_RS07320 IPR013974 SAF domain CDO28_RS07320 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CDO28_RS07325 IPR001444 Flagellar basal body rod protein, N-terminal CDO28_RS07325 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDO28_RS07325 IPR012834 Flagellar basal-body rod FlgG CDO28_RS07325 IPR019776 Flagellar basal body rod protein, conserved site CDO28_RS07325 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CDO28_RS07330 IPR001624 Flagellar hook-basal body complex protein FliE CDO28_RS07335 IPR001444 Flagellar basal body rod protein, N-terminal CDO28_RS07335 IPR006299 Flagellar basal-body rod protein FlgC CDO28_RS07335 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDO28_RS07335 IPR019776 Flagellar basal body rod protein, conserved site CDO28_RS07340 IPR001444 Flagellar basal body rod protein, N-terminal CDO28_RS07340 IPR006300 Flagellar basal-body rod protein FlgB CDO28_RS07350 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CDO28_RS07350 IPR003593 AAA+ ATPase domain CDO28_RS07350 IPR005714 ATPase, type III secretion system, FliI/YscN CDO28_RS07350 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CDO28_RS07350 IPR022426 Flagellum-specific ATP synthase FliI, clade 3 CDO28_RS07350 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS07355 IPR001444 Flagellar basal body rod protein, N-terminal CDO28_RS07355 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CDO28_RS07355 IPR012836 Flagellar basal-body rod FlgF CDO28_RS07355 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CDO28_RS07360 IPR010626 Protein of unknown function DUF1217 CDO28_RS07360 IPR023157 AGR-C-984p-like domain CDO28_RS07365 IPR000540 Flagellar motor protein MotA, conserved site CDO28_RS07365 IPR002898 MotA/TolQ/ExbB proton channel CDO28_RS07365 IPR022522 Flagellar motor stator, MotA CDO28_RS07370 IPR001543 Surface presentation of antigen (SpoA) CDO28_RS07375 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CDO28_RS07375 IPR001543 Surface presentation of antigen (SpoA) CDO28_RS07375 IPR012826 Flagellar motor switch FliN CDO28_RS07380 IPR000090 Flagellar motor switch protein FliG CDO28_RS07380 IPR011002 Flagellar motor switch protein FliG, alpha-helical CDO28_RS07380 IPR023087 CDO28_RS07380 CDO28_RS07380 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CDO28_RS07380 IPR032779 CDO28_RS07380 CDO28_RS07385 IPR006135 Type III secretion system substrate exporter CDO28_RS07385 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB CDO28_RS07385 IPR029025 Type III secretion system substrate exporter, C-terminal CDO28_RS07390 IPR017024 Uncharacterised conserved protein UCP034217, Mll2898 CDO28_RS07395 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS07395 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CDO28_RS07395 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS07395 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS07400 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS07400 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS07400 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS07405 IPR000067 Flagellar M-ring protein FliF CDO28_RS07405 IPR006182 Secretory protein YscJ/FliF CDO28_RS07405 IPR013556 Flagellar M-ring C-terminal CDO28_RS07410 IPR002559 Transposase, IS4-like CDO28_RS07410 IPR032806 CDO28_RS07410 CDO28_RS07430 IPR005659 Chemoreceptor glutamine deamidase CheD CDO28_RS07430 IPR011324 Cytotoxic necrotizing factor-like, catalytic CDO28_RS07435 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS07435 IPR011006 CheY-like superfamily CDO28_RS07440 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CDO28_RS07440 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS07440 IPR008248 Signal transduction response regulator, chemotaxis, CheB CDO28_RS07440 IPR011006 CheY-like superfamily CDO28_RS07445 IPR000780 MCP methyltransferase, CheR-type CDO28_RS07445 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal CDO28_RS07445 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CDO28_RS07445 IPR026024 Chemotaxis protein methyltransferase CheR CDO28_RS07445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS07450 IPR002545 CheW-like protein CDO28_RS07455 IPR002545 CheW-like protein CDO28_RS07455 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS07455 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS07455 IPR004105 Histidine kinase CheA-like, homodimeric domain CDO28_RS07455 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS07455 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDO28_RS07460 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS07460 IPR011006 CheY-like superfamily CDO28_RS07465 IPR002645 STAS domain CDO28_RS07470 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDO28_RS07470 IPR004090 Chemotaxis methyl-accepting receptor CDO28_RS07470 IPR009050 Globin-like CDO28_RS07470 IPR012292 Globin, structural domain CDO28_RS07475 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS07480 IPR008000 Rhamnose mutarotase CDO28_RS07480 IPR011008 Dimeric alpha-beta barrel CDO28_RS07480 IPR013448 L-rhamnose 1-epimerase CDO28_RS07485 IPR001851 ABC transporter, permease CDO28_RS07490 IPR001851 ABC transporter, permease CDO28_RS07495 IPR003439 ABC transporter-like CDO28_RS07495 IPR003593 AAA+ ATPase domain CDO28_RS07495 IPR017871 ABC transporter, conserved site CDO28_RS07495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS07500 IPR013459 Rhamnose ABC transporter, rhamnose-binding CDO28_RS07500 IPR025997 Periplasmic binding protein domain CDO28_RS07500 IPR028082 Periplasmic binding protein-like I CDO28_RS07505 IPR001034 HTH DeoR N-terminal domain CDO28_RS07505 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS07505 IPR014036 DeoR C-terminal sensor domain CDO28_RS07505 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CDO28_RS07510 IPR001303 Class II aldolase/adducin N-terminal CDO28_RS07510 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS07510 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase CDO28_RS07510 IPR016040 NAD(P)-binding domain CDO28_RS07515 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS07515 IPR013451 L-rhamnose catabolism isomerase CDO28_RS07520 IPR007341 Transglycosylase-associated protein CDO28_RS07530 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CDO28_RS07535 IPR009273 Protein of unknown function DUF930 CDO28_RS07550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS07560 IPR031807 CDO28_RS07560 CDO28_RS07565 IPR025528 Protein of unknown function DUF4415 CDO28_RS07570 IPR007460 Burkholderia phage Bups phi1, Orf7.3 CDO28_RS07580 IPR005584 DNA gyrase inhibitor YacG CDO28_RS07580 IPR013088 Zinc finger, NHR/GATA-type CDO28_RS07585 IPR003697 Maf-like protein CDO28_RS07585 IPR029001 Inosine triphosphate pyrophosphatase-like CDO28_RS07590 IPR004368 Translation initiation factor IF-1 CDO28_RS07590 IPR006196 RNA-binding domain, S1, IF1 type CDO28_RS07590 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS07595 IPR023485 Phosphotyrosine protein phosphatase I superfamily CDO28_RS07600 IPR008321 Uncharacterised conserved protein UCP032146 CDO28_RS07605 IPR001692 Histidinol dehydrogenase, conserved site CDO28_RS07605 IPR012131 Histidinol dehydrogenase CDO28_RS07605 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS07605 IPR022695 Histidinol dehydrogenase, monofunctional CDO28_RS07610 IPR021335 Protein of unknown function DUF2948 CDO28_RS07615 IPR001986 Enolpyruvate transferase domain CDO28_RS07615 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CDO28_RS07615 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CDO28_RS07630 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS07630 IPR029787 Nucleotide cyclase CDO28_RS07635 IPR021647 Copper binding periplasmic protein CusF CDO28_RS07640 IPR000923 Blue (type 1) copper domain CDO28_RS07640 IPR008972 Cupredoxin CDO28_RS07645 IPR002355 Multicopper oxidase, copper-binding site CDO28_RS07645 IPR008972 Cupredoxin CDO28_RS07645 IPR011706 Multicopper oxidase, type 2 CDO28_RS07645 IPR011707 Multicopper oxidase, type 3 CDO28_RS07650 IPR003423 Outer membrane efflux protein CDO28_RS07675 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CDO28_RS07675 IPR006406 Nicotinate phosphoribosyltransferase CDO28_RS07675 IPR007229 Nicotinate phosphoribosyltransferase family CDO28_RS07680 IPR000868 Isochorismatase-like CDO28_RS07685 IPR003715 Polysaccharide export protein CDO28_RS07685 IPR019554 Soluble ligand binding domain CDO28_RS07690 IPR001227 Acyl transferase domain CDO28_RS07690 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CDO28_RS07690 IPR006162 Phosphopantetheine attachment site CDO28_RS07690 IPR009081 Acyl carrier protein-like CDO28_RS07690 IPR011032 GroES (chaperonin 10)-like CDO28_RS07690 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS07690 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS07690 IPR013968 Polyketide synthase, KR CDO28_RS07690 IPR014030 Beta-ketoacyl synthase, N-terminal CDO28_RS07690 IPR014031 Beta-ketoacyl synthase, C-terminal CDO28_RS07690 IPR014043 Acyl transferase CDO28_RS07690 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDO28_RS07690 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CDO28_RS07690 IPR016039 Thiolase-like CDO28_RS07690 IPR016040 NAD(P)-binding domain CDO28_RS07690 IPR018201 Beta-ketoacyl synthase, active site CDO28_RS07690 IPR020801 Polyketide synthase, acyl transferase domain CDO28_RS07690 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CDO28_RS07690 IPR020807 Polyketide synthase, dehydratase domain CDO28_RS07690 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDO28_RS07690 IPR020843 Polyketide synthase, enoylreductase CDO28_RS07690 IPR032821 CDO28_RS07690 CDO28_RS07695 IPR004839 Aminotransferase, class I/classII CDO28_RS07695 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS07695 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS07695 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS07700 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS07700 IPR016040 NAD(P)-binding domain CDO28_RS07700 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS07705 IPR000917 Sulfatase CDO28_RS07705 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CDO28_RS07705 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS07710 IPR007833 Capsule polysaccharide biosynthesis CDO28_RS07715 IPR000644 CBS domain CDO28_RS07715 IPR001347 Sugar isomerase (SIS) CDO28_RS07715 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CDO28_RS07720 IPR000944 Transcription regulator Rrf2-like CDO28_RS07720 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS07720 IPR030489 CDO28_RS07720 CDO28_RS07730 IPR005665 Protein-export membrane protein SecF, bacterial CDO28_RS07730 IPR005791 Protein translocase subunit SecD CDO28_RS07730 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CDO28_RS07730 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CDO28_RS07730 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CDO28_RS07740 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDO28_RS07740 IPR012000 Thiamine pyrophosphate enzyme, central domain CDO28_RS07740 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDO28_RS07740 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS07740 IPR029061 Thiamin diphosphate-binding fold CDO28_RS07745 IPR004839 Aminotransferase, class I/classII CDO28_RS07745 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS07745 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS07745 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS07750 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS07750 IPR009057 Homeodomain-like CDO28_RS07750 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS07750 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS07750 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDO28_RS07755 IPR003439 ABC transporter-like CDO28_RS07755 IPR003593 AAA+ ATPase domain CDO28_RS07755 IPR017871 ABC transporter, conserved site CDO28_RS07755 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS07755 IPR030679 CDO28_RS07755 CDO28_RS07760 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS07765 IPR000515 MetI-like domain CDO28_RS07765 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS07770 IPR000515 MetI-like domain CDO28_RS07770 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS07775 IPR002933 Peptidase M20 CDO28_RS07775 IPR011650 Peptidase M20, dimerisation domain CDO28_RS07775 IPR017439 Amidohydrolase CDO28_RS07780 IPR002585 Cytochrome d ubiquinol oxidase, subunit I CDO28_RS07785 IPR003317 Cytochrome d ubiquinol oxidase, subunit II CDO28_RS07790 IPR002701 Chorismate mutase CDO28_RS07790 IPR008241 Isochorismate pyruvate-lyase, salicylic acid biosynthesis CDO28_RS07790 IPR020822 Chorismate mutase, type II CDO28_RS07795 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS07795 IPR005886 UDP-glucose 4-epimerase GalE CDO28_RS07795 IPR016040 NAD(P)-binding domain CDO28_RS07800 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDO28_RS07800 IPR004839 Aminotransferase, class I/classII CDO28_RS07800 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS07800 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS07800 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS07805 IPR001185 Large-conductance mechanosensitive channel CDO28_RS07805 IPR019823 Large-conductance mechanosensitive channel, conserved site CDO28_RS07810 IPR000014 PAS domain CDO28_RS07810 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS07810 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS07810 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS07810 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS07810 IPR011006 CheY-like superfamily CDO28_RS07815 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS07815 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS07815 IPR011006 CheY-like superfamily CDO28_RS07815 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS07825 IPR009297 Protein of unknown function DUF952 CDO28_RS07830 IPR001295 Dihydroorotate dehydrogenase, conserved site CDO28_RS07830 IPR005719 Dihydroorotate dehydrogenase, class 2 CDO28_RS07830 IPR005720 Dihydroorotate dehydrogenase domain CDO28_RS07830 IPR013785 Aldolase-type TIM barrel CDO28_RS07835 IPR002528 Multi antimicrobial extrusion protein CDO28_RS07840 IPR014044 CAP domain CDO28_RS07850 IPR011990 Tetratricopeptide-like helical domain CDO28_RS07850 IPR013216 Methyltransferase type 11 CDO28_RS07850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS07855 IPR003740 Membrane Protein of unknown function DUF161 CDO28_RS07860 IPR003779 Carboxymuconolactone decarboxylase-like CDO28_RS07860 IPR004675 Alkylhydroperoxidase AhpD core CDO28_RS07860 IPR029032 AhpD-like CDO28_RS07865 IPR000944 Transcription regulator Rrf2-like CDO28_RS07865 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS07870 IPR001650 Helicase, C-terminal CDO28_RS07870 IPR011545 DEAD/DEAH box helicase domain CDO28_RS07870 IPR013701 DEAD/H associated CDO28_RS07870 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS07870 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted CDO28_RS07870 IPR026362 DEXH box helicase, DNA ligase-associated CDO28_RS07870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS07880 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS07880 IPR024173 Phosphoesterase, MJ0037 CDO28_RS07880 IPR026336 Metallophosphoesterase, DNA ligase-associated CDO28_RS07880 IPR029052 Metallo-dependent phosphatase-like CDO28_RS07885 IPR011008 Dimeric alpha-beta barrel CDO28_RS07885 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS07890 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane CDO28_RS07895 IPR002781 Transmembrane protein TauE like CDO28_RS07900 IPR002477 Peptidoglycan binding-like CDO28_RS07900 IPR006597 Sel1-like CDO28_RS07900 IPR011990 Tetratricopeptide-like helical domain CDO28_RS07905 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDO28_RS07905 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDO28_RS07905 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CDO28_RS07905 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDO28_RS07905 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CDO28_RS07905 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CDO28_RS07910 IPR002155 Thiolase CDO28_RS07910 IPR016039 Thiolase-like CDO28_RS07910 IPR020610 Thiolase, active site CDO28_RS07910 IPR020613 Thiolase, conserved site CDO28_RS07910 IPR020615 Thiolase, acyl-enzyme intermediate active site CDO28_RS07910 IPR020616 Thiolase, N-terminal CDO28_RS07910 IPR020617 Thiolase, C-terminal CDO28_RS07915 IPR001753 Crotonase superfamily CDO28_RS07915 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDO28_RS07915 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDO28_RS07915 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS07915 IPR013328 Dehydrogenase, multihelical CDO28_RS07915 IPR016040 NAD(P)-binding domain CDO28_RS07915 IPR029045 ClpP/crotonase-like domain CDO28_RS07920 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDO28_RS07920 IPR023393 START-like domain CDO28_RS07925 IPR002577 Helix-turn-helix, HxlR type CDO28_RS07925 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS07930 IPR004837 Sodium/calcium exchanger membrane region CDO28_RS07935 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS07935 IPR015927 Peptidase S24/S26A/S26B/S26C CDO28_RS07935 IPR019759 Peptidase S24/S26A/S26B CDO28_RS07935 IPR028360 Peptidase S24/S26, beta-ribbon domain CDO28_RS07940 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CDO28_RS07945 IPR007791 Heat shock protein DnaJ-like protein DjlA CDO28_RS07945 IPR029024 TerB-like CDO28_RS07950 IPR006694 Fatty acid hydroxylase CDO28_RS07955 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS07965 IPR010550 Deoxycytidine triphosphate deaminase, bacterial CDO28_RS07965 IPR029054 dUTPase-like CDO28_RS07970 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDO28_RS07970 IPR006234 O-succinylhomoserine sulfhydrylase CDO28_RS07970 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS07970 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS07970 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS07975 IPR000462 CDP-alcohol phosphatidyltransferase CDO28_RS07980 IPR007474 ApaG domain CDO28_RS07980 IPR023065 Uncharacterised protein family ApaG CDO28_RS07985 IPR000397 Heat shock protein Hsp33 CDO28_RS07985 IPR016153 Heat shock protein Hsp33, N-terminal CDO28_RS07985 IPR016154 Heat shock protein Hsp33, C-terminal CDO28_RS07990 IPR002292 Ornithine/putrescine carbamoyltransferase CDO28_RS07990 IPR006130 Aspartate/ornithine carbamoyltransferase CDO28_RS07990 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CDO28_RS07990 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CDO28_RS07990 IPR024904 Ornithine carbamoyltransferase CDO28_RS07995 IPR004636 Acetylornithine/Succinylornithine transaminase family CDO28_RS07995 IPR005814 Aminotransferase class-III CDO28_RS07995 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS07995 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS07995 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS08000 IPR011681 GcrA cell cycle regulator CDO28_RS08005 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS08005 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS08005 IPR011006 CheY-like superfamily CDO28_RS08005 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB CDO28_RS08005 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS08005 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS08010 IPR026022 PhoU domain CDO28_RS08010 IPR028366 Phosphate transport system protein PhoU CDO28_RS08015 IPR003439 ABC transporter-like CDO28_RS08015 IPR003593 AAA+ ATPase domain CDO28_RS08015 IPR005670 Phosphate transport system permease protein 1 CDO28_RS08015 IPR017871 ABC transporter, conserved site CDO28_RS08015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08020 IPR000515 MetI-like domain CDO28_RS08020 IPR005672 Phosphate transport system permease protein PstA CDO28_RS08020 IPR024573 Domain of unknown function DUF3333 CDO28_RS08025 IPR000515 MetI-like domain CDO28_RS08025 IPR011864 Phosphate ABC transporter, permease protein PstC CDO28_RS08025 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain CDO28_RS08030 IPR024370 PBP domain CDO28_RS08035 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS08035 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS08035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS08035 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR CDO28_RS08040 IPR022486 Polyphosphate kinase 2, PA0141 CDO28_RS08040 IPR022488 Polyphosphate kinase-2-related CDO28_RS08040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08050 IPR004136 2-nitropropane dioxygenase, NPD CDO28_RS08050 IPR013785 Aldolase-type TIM barrel CDO28_RS08065 IPR000374 Phosphatidate cytidylyltransferase CDO28_RS08070 IPR002123 Phospholipid/glycerol acyltransferase CDO28_RS08075 IPR000462 CDP-alcohol phosphatidyltransferase CDO28_RS08080 IPR002549 Uncharacterised protein family UPF0118 CDO28_RS08085 IPR011701 Major facilitator superfamily CDO28_RS08085 IPR020846 Major facilitator superfamily domain CDO28_RS08090 IPR000873 AMP-dependent synthetase/ligase CDO28_RS08090 IPR020845 AMP-binding, conserved site CDO28_RS08090 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS08095 IPR001672 Phosphoglucose isomerase (PGI) CDO28_RS08095 IPR018189 Phosphoglucose isomerase, conserved site CDO28_RS08095 IPR023096 Phosphoglucose isomerase, C-terminal CDO28_RS08100 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CDO28_RS08100 IPR011611 Carbohydrate kinase PfkB CDO28_RS08100 IPR029056 Ribokinase-like CDO28_RS08105 IPR000836 Phosphoribosyltransferase domain CDO28_RS08105 IPR004467 Orotate phosphoribosyl transferase domain CDO28_RS08105 IPR023031 Orotate phosphoribosyltransferase CDO28_RS08105 IPR029057 Phosphoribosyltransferase-like CDO28_RS08110 IPR002195 Dihydroorotase, conserved site CDO28_RS08110 IPR004721 Dihydroorotase homodimeric type CDO28_RS08110 IPR006680 Amidohydrolase 1 CDO28_RS08110 IPR032466 CDO28_RS08110 CDO28_RS08115 IPR006083 Phosphoribulokinase/uridine kinase CDO28_RS08115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08120 IPR003439 ABC transporter-like CDO28_RS08120 IPR003593 AAA+ ATPase domain CDO28_RS08120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08125 IPR001851 ABC transporter, permease CDO28_RS08130 IPR025997 Periplasmic binding protein domain CDO28_RS08130 IPR028082 Periplasmic binding protein-like I CDO28_RS08135 IPR000600 ROK CDO28_RS08135 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS08140 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CDO28_RS08140 IPR023750 RbsD-like domain CDO28_RS08145 IPR032808 CDO28_RS08145 CDO28_RS08150 IPR000595 Cyclic nucleotide-binding domain CDO28_RS08150 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS08150 IPR012318 Helix-turn-helix motif, Crp-type CDO28_RS08150 IPR014710 RmlC-like jelly roll fold CDO28_RS08150 IPR018488 Cyclic nucleotide-binding, conserved site CDO28_RS08150 IPR018490 Cyclic nucleotide-binding-like CDO28_RS08155 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS08155 IPR007890 CHASE2 CDO28_RS08155 IPR029787 Nucleotide cyclase CDO28_RS08165 IPR006860 FecR protein CDO28_RS08175 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS08175 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA CDO28_RS08175 IPR029052 Metallo-dependent phosphatase-like CDO28_RS08180 IPR005358 Putative zinc- or iron-chelating domain containing protein CDO28_RS08185 IPR002872 Proline dehydrogenase domain CDO28_RS08185 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 CDO28_RS08185 IPR015590 Aldehyde dehydrogenase domain CDO28_RS08185 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS08185 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS08185 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS08185 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS08185 IPR024082 Proline dehydrogenase PutA, domain II CDO28_RS08185 IPR024089 Proline dehydrogenase PutA, domain I/II CDO28_RS08185 IPR024090 Proline dehydrogenase PutA, domain I CDO28_RS08185 IPR025703 Bifunctional protein PutA CDO28_RS08185 IPR029041 FAD-linked oxidoreductase-like CDO28_RS08190 IPR000640 Translation elongation factor EFG, V domain CDO28_RS08190 IPR001498 Impact, N-terminal CDO28_RS08190 IPR009022 Elongation factor G, III-V domain CDO28_RS08190 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CDO28_RS08190 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS08190 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CDO28_RS08195 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS08200 IPR014937 Protein of unknown function DUF1810 CDO28_RS08205 IPR007318 Phospholipid methyltransferase CDO28_RS08210 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CDO28_RS08220 IPR010642 Invasion protein B CDO28_RS08225 IPR005594 YadA-like, C-terminal CDO28_RS08225 IPR008635 Coiled stalk of trimeric autotransporter adhesin CDO28_RS08225 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS08230 IPR008635 Coiled stalk of trimeric autotransporter adhesin CDO28_RS08230 IPR008640 Head domain of trimeric autotransporter adhesin CDO28_RS08230 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS08240 IPR001434 Domain of unknown function DUF11 CDO28_RS08240 IPR008454 Collagen-binding surface protein Cna-like, B-type domain CDO28_RS08240 IPR013783 Immunoglobulin-like fold CDO28_RS08245 IPR001434 Domain of unknown function DUF11 CDO28_RS08245 IPR018905 Alpha-galactosidase, NEW3 domain CDO28_RS08250 IPR002559 Transposase, IS4-like CDO28_RS08250 IPR032806 CDO28_RS08250 CDO28_RS08255 IPR000262 FMN-dependent dehydrogenase CDO28_RS08255 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CDO28_RS08255 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CDO28_RS08255 IPR013785 Aldolase-type TIM barrel CDO28_RS08265 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS08265 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS08270 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS08270 IPR003012 Tetracycline transcriptional regulator, TetR CDO28_RS08270 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal CDO28_RS08270 IPR009057 Homeodomain-like CDO28_RS08270 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS08270 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS08285 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS08285 IPR003660 HAMP linker domain CDO28_RS08285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS08295 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS08295 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDO28_RS08295 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS08295 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS08300 IPR032816 CDO28_RS08300 CDO28_RS08305 IPR003660 HAMP linker domain CDO28_RS08305 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDO28_RS08310 IPR000271 Ribosomal protein L34 CDO28_RS08310 IPR020939 Ribosomal protein L34, conserved site CDO28_RS08315 IPR000100 Ribonuclease P CDO28_RS08315 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS08315 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS08320 IPR001708 Membrane insertase OXA1/ALB3/YidC CDO28_RS08320 IPR019998 Membrane insertase YidC CDO28_RS08320 IPR028053 Membrane insertase YidC, N-terminal CDO28_RS08320 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CDO28_RS08330 IPR006073 GTP binding domain CDO28_RS08330 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CDO28_RS08330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08335 IPR009200 Protein of unknown function DUF1269, membrane associated CDO28_RS08340 IPR002579 Peptide methionine sulphoxide reductase MrsB CDO28_RS08340 IPR011057 Mss4-like CDO28_RS08345 IPR018764 Anti-sigma K factor RskA CDO28_RS08350 IPR001048 Aspartate/glutamate/uridylate kinase CDO28_RS08350 IPR001057 Glutamate/acetylglutamate kinase CDO28_RS08350 IPR004662 Acetylglutamate kinase CDO28_RS08355 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS08360 IPR004026 Ada DNA repair, metal-binding CDO28_RS08360 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CDO28_RS08360 IPR009057 Homeodomain-like CDO28_RS08360 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS08360 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CDO28_RS08360 IPR016221 Bifunctional regulatory protein Ada CDO28_RS08360 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS08365 IPR000620 Drug/metabolite transporter CDO28_RS08370 IPR006439 HAD hydrolase, subfamily IA CDO28_RS08370 IPR010237 Pyrimidine 5-nucleotidase CDO28_RS08370 IPR023214 HAD-like domain CDO28_RS08375 IPR031100 CDO28_RS08375 CDO28_RS08380 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS08380 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family CDO28_RS08380 IPR011004 Trimeric LpxA-like CDO28_RS08380 IPR018357 Hexapeptide transferase, conserved site CDO28_RS08380 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 CDO28_RS08385 IPR008523 Lactobacillus phage LBR48, DUF805 CDO28_RS08390 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CDO28_RS08390 IPR001650 Helicase, C-terminal CDO28_RS08390 IPR005580 DbpA, RNA-binding CDO28_RS08390 IPR011545 DEAD/DEAH box helicase domain CDO28_RS08390 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS08390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08395 IPR002577 Helix-turn-helix, HxlR type CDO28_RS08395 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS08400 IPR000847 Transcription regulator HTH, LysR CDO28_RS08400 IPR005119 LysR, substrate-binding CDO28_RS08400 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS08405 IPR002168 Lipase, GDXG, active site CDO28_RS08405 IPR013094 Alpha/beta hydrolase fold-3 CDO28_RS08405 IPR029058 Alpha/Beta hydrolase fold CDO28_RS08410 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS08410 IPR032317 CDO28_RS08410 CDO28_RS08415 IPR001036 Acriflavin resistance protein CDO28_RS08415 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CDO28_RS08415 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDO28_RS08420 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CDO28_RS08420 IPR002933 Peptidase M20 CDO28_RS08420 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria CDO28_RS08420 IPR011650 Peptidase M20, dimerisation domain CDO28_RS08435 IPR001406 Pseudouridine synthase I, TruA CDO28_RS08435 IPR020094 Pseudouridine synthase I, TruA, N-terminal CDO28_RS08435 IPR020095 Pseudouridine synthase I, TruA, C-terminal CDO28_RS08435 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CDO28_RS08435 IPR020103 Pseudouridine synthase, catalytic domain CDO28_RS08440 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CDO28_RS08440 IPR002376 Formyl transferase, N-terminal CDO28_RS08440 IPR005793 Formyl transferase, C-terminal CDO28_RS08440 IPR005794 Methionyl-tRNA formyltransferase CDO28_RS08440 IPR011034 Formyl transferase, C-terminal-like CDO28_RS08445 IPR023635 Peptide deformylase CDO28_RS08450 IPR003798 DNA recombination RmuC CDO28_RS08455 IPR002139 Ribokinase CDO28_RS08455 IPR011611 Carbohydrate kinase PfkB CDO28_RS08455 IPR011877 Ribokinase, bacterial CDO28_RS08455 IPR029056 Ribokinase-like CDO28_RS08460 IPR003660 HAMP linker domain CDO28_RS08460 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDO28_RS08460 IPR004090 Chemotaxis methyl-accepting receptor CDO28_RS08460 IPR033479 CDO28_RS08460 CDO28_RS08465 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CDO28_RS08470 IPR002068 Alpha crystallin/Hsp20 domain CDO28_RS08470 IPR008978 HSP20-like chaperone CDO28_RS08475 IPR009531 Protein of unknown function DUF1150 CDO28_RS08480 IPR003358 tRNA (guanine-N-7) methyltransferase CDO28_RS08480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS08485 IPR002133 S-adenosylmethionine synthetase CDO28_RS08485 IPR022628 S-adenosylmethionine synthetase, N-terminal CDO28_RS08485 IPR022629 S-adenosylmethionine synthetase, central domain CDO28_RS08485 IPR022630 S-adenosylmethionine synthetase, C-terminal CDO28_RS08485 IPR022631 S-adenosylmethionine synthetase, conserved site CDO28_RS08485 IPR022636 S-adenosylmethionine synthetase superfamily CDO28_RS08490 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS08490 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS08495 IPR003010 Carbon-nitrogen hydrolase CDO28_RS08495 IPR004563 Apolipoprotein N-acyltransferase CDO28_RS08500 IPR000644 CBS domain CDO28_RS08500 IPR005170 Transporter-associated domain CDO28_RS08500 IPR016166 FAD-binding, type 2 CDO28_RS08500 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS08505 IPR002036 Endoribonuclease YbeY CDO28_RS08505 IPR020549 Endoribonuclease YbeY, conserved site CDO28_RS08505 IPR023091 Metalloprotease catalytic domain, predicted CDO28_RS08510 IPR003714 PhoH-like protein CDO28_RS08510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08515 IPR002792 TRAM domain CDO28_RS08515 IPR005839 Methylthiotransferase CDO28_RS08515 IPR006463 tRNA-i(6)A37 modification enzyme MiaB CDO28_RS08515 IPR006638 Elongator protein 3/MiaB/NifB CDO28_RS08515 IPR007197 Radical SAM CDO28_RS08515 IPR013848 Methylthiotransferase, N-terminal CDO28_RS08515 IPR020612 Methylthiotransferase, conserved site CDO28_RS08515 IPR023404 Radical SAM, alpha/beta horseshoe CDO28_RS08520 IPR002123 Phospholipid/glycerol acyltransferase CDO28_RS08525 IPR000182 GNAT domain CDO28_RS08525 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS08530 IPR000905 Gcp-like domain CDO28_RS08530 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ CDO28_RS08535 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CDO28_RS08535 IPR014824 Scaffold protein Nfu/NifU, N-terminal CDO28_RS08540 IPR006016 UspA CDO28_RS08540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS08545 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDO28_RS08545 IPR002305 Aminoacyl-tRNA synthetase, class Ic CDO28_RS08545 IPR002306 Tryptophan-tRNA ligase CDO28_RS08545 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS08545 IPR024109 Tryptophan-tRNA ligase, bacterial-type CDO28_RS08550 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS08550 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS08555 IPR004268 Flagellin assembly, membrane protein MviN CDO28_RS08560 IPR002912 ACT domain CDO28_RS08560 IPR002934 Nucleotidyl transferase domain CDO28_RS08560 IPR003607 HD/PDEase domain CDO28_RS08560 IPR006674 HD domain CDO28_RS08560 IPR010043 Protein-PII uridylyltransferase CDO28_RS08560 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase CDO28_RS08565 IPR000432 DNA mismatch repair protein MutS, C-terminal CDO28_RS08565 IPR005748 DNA mismatch repair protein MutS, type 1 CDO28_RS08565 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CDO28_RS08565 IPR007696 DNA mismatch repair protein MutS, core CDO28_RS08565 IPR007860 DNA mismatch repair protein MutS, connector domain CDO28_RS08565 IPR007861 DNA mismatch repair protein MutS, clamp CDO28_RS08565 IPR016151 DNA mismatch repair protein MutS, N-terminal CDO28_RS08565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08570 IPR002505 Phosphate acetyl/butaryl transferase CDO28_RS08570 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase CDO28_RS08570 IPR012301 Malic enzyme, N-terminal domain CDO28_RS08570 IPR012302 Malic enzyme, NAD-binding CDO28_RS08570 IPR015884 Malic enzyme, conserved site CDO28_RS08570 IPR016040 NAD(P)-binding domain CDO28_RS08575 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS08580 IPR000014 PAS domain CDO28_RS08580 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS08580 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS08580 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS08580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS08580 IPR011006 CheY-like superfamily CDO28_RS08585 IPR001872 Peptidase A8, signal peptidase II CDO28_RS08590 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDO28_RS08590 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CDO28_RS08590 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDO28_RS08590 IPR029028 Alpha/beta knot methyltransferases CDO28_RS08590 IPR029064 50S ribosomal protein L30e-like CDO28_RS08595 IPR019614 S-adenosylmethionine-dependent methyltransferase CDO28_RS08595 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS08600 IPR010419 Carbon monoxide dehydrogenase subunit G CDO28_RS08600 IPR023393 START-like domain CDO28_RS08605 IPR010445 Protein of unknown function DUF1049 CDO28_RS08610 IPR000119 Histone-like bacterial DNA-binding protein CDO28_RS08610 IPR005685 Integration host factor, beta subunit CDO28_RS08610 IPR010992 Integration host factor (IHF)-like DNA-binding domain CDO28_RS08610 IPR020816 Histone-like DNA-binding protein, conserved site CDO28_RS08615 IPR002142 Peptidase S49 CDO28_RS08615 IPR004635 Peptidase S49, SppA CDO28_RS08615 IPR029045 ClpP/crotonase-like domain CDO28_RS08620 IPR010664 Lipopolysaccharide assembly, LptC-related CDO28_RS08625 IPR005653 Organic solvent tolerance-like, N-terminal CDO28_RS08630 IPR003439 ABC transporter-like CDO28_RS08630 IPR003593 AAA+ ATPase domain CDO28_RS08630 IPR017871 ABC transporter, conserved site CDO28_RS08630 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08630 IPR030921 CDO28_RS08630 CDO28_RS08635 IPR000394 RNA polymerase sigma factor 54 CDO28_RS08635 IPR007046 RNA polymerase sigma factor 54, core-binding CDO28_RS08635 IPR007634 RNA polymerase sigma factor 54, DNA-binding CDO28_RS08640 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein CDO28_RS08640 IPR032528 CDO28_RS08640 CDO28_RS08645 IPR002178 PTS EIIA type-2 domain CDO28_RS08645 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN CDO28_RS08645 IPR016152 Phosphotransferase/anion transporter CDO28_RS08655 IPR000740 GrpE nucleotide exchange factor CDO28_RS08655 IPR009012 GrpE nucleotide exchange factor, head CDO28_RS08655 IPR013805 GrpE nucleotide exchange factor, coiled-coil CDO28_RS08660 IPR002571 Heat-inducible transcription repressor HrcA CDO28_RS08660 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS08660 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal CDO28_RS08660 IPR029016 GAF domain-like CDO28_RS08665 IPR001247 Exoribonuclease, phosphorolytic domain 1 CDO28_RS08665 IPR002381 Ribonuclease phosphorolytic, bacterial-type CDO28_RS08665 IPR015847 Exoribonuclease, phosphorolytic domain 2 CDO28_RS08665 IPR018336 Ribonuclease PH, conserved site CDO28_RS08665 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS08665 IPR027408 PNPase/RNase PH domain CDO28_RS08670 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS08670 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS08675 IPR002637 Ham1-like protein CDO28_RS08675 IPR020922 Non-canonical purine NTP pyrophosphatase CDO28_RS08675 IPR029001 Inosine triphosphate pyrophosphatase-like CDO28_RS08680 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related CDO28_RS08680 IPR006638 Elongator protein 3/MiaB/NifB CDO28_RS08680 IPR007197 Radical SAM CDO28_RS08680 IPR010723 HemN, C-terminal domain CDO28_RS08680 IPR023404 Radical SAM, alpha/beta horseshoe CDO28_RS08685 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS08685 IPR009959 Polyketide cyclase SnoaL-like domain CDO28_RS08685 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS08685 IPR032710 CDO28_RS08685 CDO28_RS08690 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDO28_RS08690 IPR023393 START-like domain CDO28_RS08695 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS08695 IPR011990 Tetratricopeptide-like helical domain CDO28_RS08695 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS08695 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS08695 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS08695 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS08695 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS08700 IPR005545 YCII-related CDO28_RS08700 IPR011008 Dimeric alpha-beta barrel CDO28_RS08705 IPR001957 Chromosomal replication control, initiator DnaA CDO28_RS08705 IPR003593 AAA+ ATPase domain CDO28_RS08705 IPR010921 Trp repressor/replication initiator CDO28_RS08705 IPR013159 Chromosomal replication initiator, DnaA C-terminal CDO28_RS08705 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) CDO28_RS08705 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CDO28_RS08705 IPR020591 Chromosomal replication control, initiator DnaA-like CDO28_RS08705 IPR024633 DnaA N-terminal domain CDO28_RS08705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08715 IPR002583 Ribosomal protein S20 CDO28_RS08720 IPR001753 Crotonase superfamily CDO28_RS08720 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDO28_RS08720 IPR029045 ClpP/crotonase-like domain CDO28_RS08725 IPR010663 Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase CDO28_RS08725 IPR010979 Ribosomal protein S13-like, H2TH CDO28_RS08725 IPR012319 DNA glycosylase/AP lyase, catalytic domain CDO28_RS08725 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CDO28_RS08725 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CDO28_RS08725 IPR020629 Formamidopyrimidine-DNA glycosylase CDO28_RS08730 IPR004033 UbiE/COQ5 methyltransferase CDO28_RS08730 IPR023576 UbiE/COQ5 methyltransferase, conserved site CDO28_RS08730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS08735 IPR004147 UbiB domain CDO28_RS08735 IPR010232 Probable protein kinase UbiB CDO28_RS08735 IPR011009 Protein kinase-like domain CDO28_RS08740 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS08740 IPR016040 NAD(P)-binding domain CDO28_RS08745 IPR002110 Ankyrin repeat CDO28_RS08745 IPR020683 Ankyrin repeat-containing domain CDO28_RS08755 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CDO28_RS08755 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS08760 IPR000944 Transcription regulator Rrf2-like CDO28_RS08760 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS08765 IPR003382 Flavoprotein CDO28_RS08765 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CDO28_RS08765 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CDO28_RS08770 IPR026869 Putative glutamine amidotransferase type 2 CDO28_RS08770 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS08775 IPR000683 Oxidoreductase, N-terminal CDO28_RS08775 IPR004104 Oxidoreductase, C-terminal CDO28_RS08775 IPR016040 NAD(P)-binding domain CDO28_RS08785 IPR000281 Helix-turn-helix protein RpiR CDO28_RS08785 IPR001347 Sugar isomerase (SIS) CDO28_RS08785 IPR009057 Homeodomain-like CDO28_RS08785 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS08790 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CDO28_RS08790 IPR011611 Carbohydrate kinase PfkB CDO28_RS08790 IPR018659 Protein of unknown function DUF2090 CDO28_RS08790 IPR029056 Ribokinase-like CDO28_RS08790 IPR030830 CDO28_RS08790 CDO28_RS08795 IPR000399 TPP-binding enzyme, conserved site CDO28_RS08795 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDO28_RS08795 IPR012000 Thiamine pyrophosphate enzyme, central domain CDO28_RS08795 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDO28_RS08795 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS08795 IPR029061 Thiamin diphosphate-binding fold CDO28_RS08795 IPR030817 CDO28_RS08795 CDO28_RS08800 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS08800 IPR030823 CDO28_RS08800 CDO28_RS08805 IPR011051 RmlC-like cupin domain CDO28_RS08805 IPR014710 RmlC-like jelly roll fold CDO28_RS08805 IPR021120 KduI/IolB isomerase CDO28_RS08805 IPR024203 5-deoxy-glucuronate isomerase, IolB CDO28_RS08810 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS08810 IPR011057 Mss4-like CDO28_RS08815 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS08815 IPR016040 NAD(P)-binding domain CDO28_RS08820 IPR003313 AraC-type arabinose-binding/dimerisation domain CDO28_RS08820 IPR009057 Homeodomain-like CDO28_RS08820 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS08825 IPR000620 Drug/metabolite transporter CDO28_RS08830 IPR000795 Elongation factor, GTP-binding domain CDO28_RS08830 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CDO28_RS08830 IPR004548 Peptide chain release factor 3 CDO28_RS08830 IPR005225 Small GTP-binding protein domain CDO28_RS08830 IPR009000 Translation protein, beta-barrel domain CDO28_RS08830 IPR009022 Elongation factor G, III-V domain CDO28_RS08830 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08830 IPR031157 CDO28_RS08830 CDO28_RS08830 IPR032090 CDO28_RS08830 CDO28_RS08835 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase CDO28_RS08835 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase CDO28_RS08835 IPR029054 dUTPase-like CDO28_RS08840 IPR000485 AsnC-type HTH domain CDO28_RS08840 IPR011008 Dimeric alpha-beta barrel CDO28_RS08840 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS08840 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS08840 IPR019888 Transcription regulator AsnC-type CDO28_RS08845 IPR000620 Drug/metabolite transporter CDO28_RS08850 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS08855 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS08860 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDO28_RS08860 IPR005856 Cysteine synthase K/M CDO28_RS08860 IPR005859 Cysteine synthase A CDO28_RS08865 IPR000523 Magnesium chelatase, ChlI subunit CDO28_RS08865 IPR003593 AAA+ ATPase domain CDO28_RS08865 IPR004482 Mg chelatase-related protein CDO28_RS08865 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS08865 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS08865 IPR025158 Mg chelatase-related protein, C-terminal domain CDO28_RS08865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS08870 IPR004215 Prokaryotic glutathione synthetase, N-terminal CDO28_RS08870 IPR004218 Prokaryotic glutathione synthetase, ATP-binding CDO28_RS08870 IPR006284 Glutathione synthetase, prokaryotic CDO28_RS08870 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS08870 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS08870 IPR016185 Pre-ATP-grasp domain CDO28_RS08875 IPR003509 Uncharacterised protein family UPF0102 CDO28_RS08875 IPR011335 Restriction endonuclease type II-like CDO28_RS08875 IPR011856 tRNA endonuclease-like domain CDO28_RS08880 IPR000878 Tetrapyrrole methylase CDO28_RS08880 IPR008189 rRNA small subunit methyltransferase I CDO28_RS08880 IPR014776 Tetrapyrrole methylase, subdomain 2 CDO28_RS08880 IPR014777 Tetrapyrrole methylase, subdomain 1 CDO28_RS08880 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CDO28_RS08885 IPR001001 DNA polymerase III, beta chain CDO28_RS08885 IPR022634 DNA polymerase III, beta chain, N-terminal CDO28_RS08885 IPR022635 DNA polymerase III, beta chain, C-terminal CDO28_RS08885 IPR022637 DNA polymerase III, beta chain, central CDO28_RS08890 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS08895 IPR013078 Histidine phosphatase superfamily, clade-1 CDO28_RS08895 IPR029033 Histidine phosphatase superfamily CDO28_RS08900 IPR001754 Orotidine 5'-phosphate decarboxylase domain CDO28_RS08900 IPR011060 Ribulose-phosphate binding barrel CDO28_RS08900 IPR013785 Aldolase-type TIM barrel CDO28_RS08900 IPR014732 Orotidine 5'-phosphate decarboxylase CDO28_RS08900 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CDO28_RS08905 IPR010753 Protein of unknown function DUF1330 CDO28_RS08905 IPR011008 Dimeric alpha-beta barrel CDO28_RS08910 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS08910 IPR016040 NAD(P)-binding domain CDO28_RS08920 IPR003824 Undecaprenyl-diphosphatase UppP CDO28_RS08925 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS08925 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS08925 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS08925 IPR012336 Thioredoxin-like fold CDO28_RS08930 IPR004453 Epoxyqueuosine reductase QueG CDO28_RS08930 IPR009051 Alpha-helical ferredoxin CDO28_RS08930 IPR013542 Domain of unknown function DUF1730 CDO28_RS08930 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS08935 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS08935 IPR016040 NAD(P)-binding domain CDO28_RS08940 IPR009009 RlpA-like double-psi beta-barrel domain CDO28_RS08940 IPR012997 Rare lipoprotein A, bacterial CDO28_RS08945 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p CDO28_RS08945 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CDO28_RS08945 IPR023267 RNA (C5-cytosine) methyltransferase CDO28_RS08945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS08955 IPR009056 Cytochrome c-like domain CDO28_RS08955 IPR010538 Protein of unknown function DUF1111 CDO28_RS08965 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CDO28_RS08970 IPR008311 Uncharacterised conserved protein UCP028101 CDO28_RS08970 IPR015943 WD40/YVTN repeat-like-containing domain CDO28_RS08975 IPR000182 GNAT domain CDO28_RS08975 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS08980 IPR003736 Phenylacetic acid degradation-related domain CDO28_RS08980 IPR006683 Thioesterase superfamily CDO28_RS08980 IPR029069 HotDog domain CDO28_RS08985 IPR000845 Nucleoside phosphorylase domain CDO28_RS08985 IPR010050 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative CDO28_RS08990 IPR001674 GMP synthase, C-terminal CDO28_RS08990 IPR004739 GMP synthase, N-terminal CDO28_RS08990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS08990 IPR017926 Glutamine amidotransferase CDO28_RS08990 IPR022310 NAD/GMP synthase CDO28_RS08990 IPR022955 GMP synthase CDO28_RS08990 IPR029062 Class I glutamine amidotransferase-like CDO28_RS08995 IPR002716 PIN domain CDO28_RS08995 IPR022907 VapC family CDO28_RS08995 IPR029060 PIN domain-like CDO28_RS09000 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDO28_RS09020 IPR007036 Succinylglutamate desuccinylase/aspartoacylase CDO28_RS09025 IPR000796 Aspartate/other aminotransferase CDO28_RS09025 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDO28_RS09025 IPR004839 Aminotransferase, class I/classII CDO28_RS09025 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS09025 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS09030 IPR006504 Transcriptional regulator Spx/MgsR CDO28_RS09030 IPR006660 Arsenate reductase-like CDO28_RS09030 IPR012336 Thioredoxin-like fold CDO28_RS09035 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CDO28_RS09035 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CDO28_RS09040 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS09045 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS09045 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS09045 IPR012336 Thioredoxin-like fold CDO28_RS09050 IPR000787 Peptidase M29, aminopeptidase II CDO28_RS09055 IPR000620 Drug/metabolite transporter CDO28_RS09060 IPR000835 MarR-type HTH domain CDO28_RS09060 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS09060 IPR023187 Transcriptional regulator MarR-type, conserved site CDO28_RS09065 IPR003680 Flavodoxin-like fold CDO28_RS09065 IPR029039 Flavoprotein-like CDO28_RS09070 IPR003753 Exonuclease VII, large subunit CDO28_RS09070 IPR020579 Exonuclease VII, large subunit, C-terminal CDO28_RS09070 IPR025824 OB-fold nucleic acid binding domain CDO28_RS09075 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS09075 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS09085 IPR000683 Oxidoreductase, N-terminal CDO28_RS09085 IPR016040 NAD(P)-binding domain CDO28_RS09090 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS09095 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CDO28_RS09100 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS09100 IPR016040 NAD(P)-binding domain CDO28_RS09105 IPR009078 Ferritin-like superfamily CDO28_RS09105 IPR010287 Domain of unknown function DUF892 CDO28_RS09105 IPR012347 Ferritin-related CDO28_RS09110 IPR000847 Transcription regulator HTH, LysR CDO28_RS09110 IPR005119 LysR, substrate-binding CDO28_RS09110 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS09115 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS09120 IPR032710 CDO28_RS09120 CDO28_RS09125 IPR002547 tRNA-binding domain CDO28_RS09125 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CDO28_RS09125 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding CDO28_RS09125 IPR005146 B3/B4 tRNA-binding domain CDO28_RS09125 IPR005147 tRNA synthetase, B5-domain CDO28_RS09125 IPR009061 DNA binding domain, putative CDO28_RS09125 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS09125 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CDO28_RS09130 IPR002319 Phenylalanyl-tRNA synthetase CDO28_RS09130 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CDO28_RS09130 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CDO28_RS09130 IPR010978 tRNA-binding arm CDO28_RS09130 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CDO28_RS09135 IPR005813 Ribosomal protein L20 CDO28_RS09140 IPR001706 Ribosomal protein L35, non-mitochondrial CDO28_RS09140 IPR018265 Ribosomal protein L35, conserved site CDO28_RS09140 IPR021137 Ribosomal protein L35 CDO28_RS09145 IPR001288 Translation initiation factor 3 CDO28_RS09145 IPR019814 Translation initiation factor 3, N-terminal CDO28_RS09145 IPR019815 Translation initiation factor 3, C-terminal CDO28_RS09150 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS09150 IPR029058 Alpha/Beta hydrolase fold CDO28_RS09155 IPR010319 Transglutaminase-like cysteine peptidase, predicted CDO28_RS09160 IPR003251 Rubrerythrin CDO28_RS09160 IPR009078 Ferritin-like superfamily CDO28_RS09160 IPR012347 Ferritin-related CDO28_RS09160 IPR017040 Uncharacterised conserved protein UCP035918 , rubrerythrin/DUF125-related CDO28_RS09165 IPR003333 Mycolic acid cyclopropane synthase CDO28_RS09165 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS09170 IPR001059 Translation elongation factor P/YeiP, central CDO28_RS09170 IPR008991 Translation protein SH3-like domain CDO28_RS09170 IPR011768 Translation elongation factor P CDO28_RS09170 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS09170 IPR013185 Translation elongation factor, KOW-like CDO28_RS09170 IPR013852 Translation elongation factor P/YeiP, conserved site CDO28_RS09170 IPR014722 Ribosomal protein L2 domain 2 CDO28_RS09170 IPR015365 Elongation factor P, C-terminal CDO28_RS09170 IPR020599 Translation elongation factor P/YeiP CDO28_RS09175 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CDO28_RS09175 IPR004525 Elongation factor P--(R)-beta-lysine ligase CDO28_RS09175 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CDO28_RS09180 IPR003739 Lysine-2,3-aminomutase family CDO28_RS09180 IPR007197 Radical SAM CDO28_RS09180 IPR013785 Aldolase-type TIM barrel CDO28_RS09180 IPR022447 Lysine-2,3-aminomutase-related CDO28_RS09185 IPR006664 Outer membrane protein, bacterial CDO28_RS09185 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CDO28_RS09185 IPR006690 Outer membrane protein, OmpA-like, conserved site CDO28_RS09190 IPR010331 Exopolysaccharide synthesis, ExoD CDO28_RS09195 IPR000182 GNAT domain CDO28_RS09195 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS09200 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS09200 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS09200 IPR011051 RmlC-like cupin domain CDO28_RS09200 IPR014710 RmlC-like jelly roll fold CDO28_RS09205 IPR011701 Major facilitator superfamily CDO28_RS09205 IPR020846 Major facilitator superfamily domain CDO28_RS09210 IPR000640 Translation elongation factor EFG, V domain CDO28_RS09210 IPR000795 Elongation factor, GTP-binding domain CDO28_RS09210 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CDO28_RS09210 IPR005225 Small GTP-binding protein domain CDO28_RS09210 IPR006297 Elongation factor 4 CDO28_RS09210 IPR009022 Elongation factor G, III-V domain CDO28_RS09210 IPR013842 GTP-binding protein LepA, C-terminal CDO28_RS09210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09210 IPR031157 CDO28_RS09210 CDO28_RS09215 IPR009956 Post-segregation antitoxin CcdA CDO28_RS09220 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CDO28_RS09220 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CDO28_RS09225 IPR032808 CDO28_RS09225 CDO28_RS09230 IPR011893 Selenoprotein, Rdx type CDO28_RS09230 IPR012336 Thioredoxin-like fold CDO28_RS09240 IPR000305 GIY-YIG nuclease superfamily CDO28_RS09240 IPR027299 GIY-YIG domain CDO28_RS09255 IPR001584 Integrase, catalytic core CDO28_RS09255 IPR009057 Homeodomain-like CDO28_RS09255 IPR012337 Ribonuclease H-like domain CDO28_RS09260 IPR002562 3'-5' exonuclease domain CDO28_RS09260 IPR012337 Ribonuclease H-like domain CDO28_RS09270 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS09270 IPR016040 NAD(P)-binding domain CDO28_RS09275 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS09275 IPR003660 HAMP linker domain CDO28_RS09275 IPR029151 Periplasmic sensor domain-like CDO28_RS09275 IPR029787 Nucleotide cyclase CDO28_RS09275 IPR033479 CDO28_RS09275 CDO28_RS09285 IPR012413 BA14k family CDO28_RS09305 IPR000110 Ribosomal protein S1 CDO28_RS09305 IPR003029 Ribosomal protein S1, RNA-binding domain CDO28_RS09305 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS09305 IPR022967 RNA-binding domain, S1 CDO28_RS09310 IPR003136 Cytidylate kinase CDO28_RS09310 IPR011994 Cytidylate kinase domain CDO28_RS09310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09315 IPR001986 Enolpyruvate transferase domain CDO28_RS09315 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CDO28_RS09315 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CDO28_RS09315 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CDO28_RS09320 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid CDO28_RS09330 IPR003848 Domain of unknown function DUF218 CDO28_RS09330 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS09335 IPR005115 Uncharacterised domain UPF0126 CDO28_RS09340 IPR002481 Ferric-uptake regulator CDO28_RS09340 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS09345 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA CDO28_RS09345 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CDO28_RS09345 IPR029069 HotDog domain CDO28_RS09350 IPR014030 Beta-ketoacyl synthase, N-terminal CDO28_RS09350 IPR014031 Beta-ketoacyl synthase, C-terminal CDO28_RS09350 IPR016039 Thiolase-like CDO28_RS09350 IPR018201 Beta-ketoacyl synthase, active site CDO28_RS09350 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDO28_RS09355 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS09355 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CDO28_RS09355 IPR016040 NAD(P)-binding domain CDO28_RS09360 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDO28_RS09360 IPR007848 Methyltransferase small domain CDO28_RS09360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS09365 IPR001247 Exoribonuclease, phosphorolytic domain 1 CDO28_RS09365 IPR003029 Ribosomal protein S1, RNA-binding domain CDO28_RS09365 IPR004087 K Homology domain CDO28_RS09365 IPR004088 K Homology domain, type 1 CDO28_RS09365 IPR012162 Polyribonucleotide nucleotidyltransferase CDO28_RS09365 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS09365 IPR015847 Exoribonuclease, phosphorolytic domain 2 CDO28_RS09365 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CDO28_RS09365 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS09365 IPR022967 RNA-binding domain, S1 CDO28_RS09365 IPR027408 PNPase/RNase PH domain CDO28_RS09370 IPR000589 Ribosomal protein S15 CDO28_RS09370 IPR005290 Ribosomal protein S15, bacterial-type CDO28_RS09370 IPR009068 S15/NS1, RNA-binding CDO28_RS09375 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS09375 IPR011102 Signal transduction histidine kinase, HWE region CDO28_RS09380 IPR002501 Pseudouridine synthase II CDO28_RS09380 IPR014780 tRNA pseudouridine synthase II, TruB CDO28_RS09380 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal CDO28_RS09380 IPR015947 PUA-like domain CDO28_RS09380 IPR020103 Pseudouridine synthase, catalytic domain CDO28_RS09380 IPR032819 CDO28_RS09380 CDO28_RS09385 IPR000238 Ribosome-binding factor A CDO28_RS09385 IPR015946 K homology domain-like, alpha/beta CDO28_RS09385 IPR020053 Ribosome-binding factor A, conserved site CDO28_RS09385 IPR023799 Ribosome-binding factor A domain CDO28_RS09390 IPR000178 Translation initiation factor aIF-2, bacterial-like CDO28_RS09390 IPR005225 Small GTP-binding protein domain CDO28_RS09390 IPR006847 Translation initiation factor IF-2, N-terminal CDO28_RS09390 IPR009000 Translation protein, beta-barrel domain CDO28_RS09390 IPR013575 Initiation factor 2 associated domain, bacterial CDO28_RS09390 IPR023115 Translation initiation factor IF- 2, domain 3 CDO28_RS09390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09395 IPR007393 Domain of unknown function DUF448 CDO28_RS09395 IPR029064 50S ribosomal protein L30e-like CDO28_RS09400 IPR003029 Ribosomal protein S1, RNA-binding domain CDO28_RS09400 IPR004087 K Homology domain CDO28_RS09400 IPR009019 K homology domain, prokaryotic type CDO28_RS09400 IPR010213 Transcription termination factor NusA CDO28_RS09400 IPR010214 Transcription termination factor NusA, C-terminal duplication CDO28_RS09400 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CDO28_RS09400 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS09400 IPR013735 Transcription factor NusA, N-terminal CDO28_RS09400 IPR015946 K homology domain-like, alpha/beta CDO28_RS09400 IPR022967 RNA-binding domain, S1 CDO28_RS09400 IPR025249 KH domain, NusA-like CDO28_RS09400 IPR030842 CDO28_RS09400 CDO28_RS09405 IPR003728 Ribosome maturation factor RimP CDO28_RS09405 IPR028989 Ribosome maturation factor RimP, N-terminal CDO28_RS09405 IPR028998 Ribosome maturation factor RimP, C-terminal CDO28_RS09410 IPR010290 Transmembrane secretion effector CDO28_RS09410 IPR020846 Major facilitator superfamily domain CDO28_RS09415 IPR002477 Peptidoglycan binding-like CDO28_RS09415 IPR011970 Lytic murein transglycosylase CDO28_RS09415 IPR023346 Lysozyme-like domain CDO28_RS09415 IPR031304 CDO28_RS09415 CDO28_RS09420 IPR000093 DNA recombination protein RecR CDO28_RS09420 IPR006171 Toprim domain CDO28_RS09420 IPR015967 Recombination protein RecR, conserved site CDO28_RS09420 IPR023627 Recombination protein RecR CDO28_RS09420 IPR023628 Recombination protein RecR, C4-type zinc finger CDO28_RS09425 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS09430 IPR004401 Nucleoid-associated protein YbaB CDO28_RS09435 IPR003593 AAA+ ATPase domain CDO28_RS09435 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CDO28_RS09435 IPR012763 DNA polymerase III, subunit gamma/ tau CDO28_RS09435 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal CDO28_RS09435 IPR022754 DNA polymerase III, gamma subunit, domain III CDO28_RS09435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09445 IPR001310 Histidine triad (HIT) protein CDO28_RS09445 IPR011146 HIT-like domain CDO28_RS09445 IPR026026 Histidine triad hydrolase, Hint-type CDO28_RS09450 IPR000086 NUDIX hydrolase domain CDO28_RS09450 IPR015375 NADH pyrophosphatase-like, N-terminal CDO28_RS09450 IPR015376 Zinc ribbon, NADH pyrophosphatase CDO28_RS09450 IPR015797 NUDIX hydrolase domain-like CDO28_RS09450 IPR020084 NUDIX hydrolase, conserved site CDO28_RS09455 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS09455 IPR013196 Helix-turn-helix, type 11 CDO28_RS09455 IPR026881 WYL domain CDO28_RS09460 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS09460 IPR026275 Glyoxalase/bleomycin resistance protein/dioxygenase CDO28_RS09460 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS09465 IPR009506 Protein of unknown function DUF1127 CDO28_RS09470 IPR001086 Prephenate dehydratase CDO28_RS09470 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CDO28_RS09470 IPR018528 Prephenate dehydratase, conserved site CDO28_RS09475 IPR003329 Acylneuraminate cytidylyltransferase CDO28_RS09475 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase CDO28_RS09475 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS09480 IPR002327 Cytochrome c, class IA/ IB CDO28_RS09480 IPR009056 Cytochrome c-like domain CDO28_RS09485 IPR001544 Aminotransferase, class IV CDO28_RS09485 IPR005786 Branched-chain amino acid aminotransferase II CDO28_RS09485 IPR018300 Aminotransferase, class IV, conserved site CDO28_RS09490 IPR004776 Auxin efflux carrier CDO28_RS09495 IPR007055 BON domain CDO28_RS09500 IPR000847 Transcription regulator HTH, LysR CDO28_RS09500 IPR005119 LysR, substrate-binding CDO28_RS09500 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS09505 IPR011701 Major facilitator superfamily CDO28_RS09505 IPR020846 Major facilitator superfamily domain CDO28_RS09510 IPR002938 Monooxygenase, FAD-binding CDO28_RS09510 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS09515 IPR000531 TonB-dependent receptor, beta-barrel CDO28_RS09515 IPR012910 TonB-dependent receptor, plug CDO28_RS09520 IPR011701 Major facilitator superfamily CDO28_RS09520 IPR020846 Major facilitator superfamily domain CDO28_RS09525 IPR009057 Homeodomain-like CDO28_RS09525 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS09525 IPR018062 HTH domain AraC-type, conserved site CDO28_RS09525 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS09535 IPR008651 Uncharacterised protein family HicB CDO28_RS09535 IPR010985 Ribbon-helix-helix CDO28_RS09550 IPR002569 Peptide methionine sulphoxide reductase MsrA CDO28_RS09555 IPR003760 Basic membrane lipoprotein CDO28_RS09555 IPR028082 Periplasmic binding protein-like I CDO28_RS09560 IPR007236 SlyX CDO28_RS09570 IPR020556 Amidase, conserved site CDO28_RS09570 IPR023631 Amidase signature domain CDO28_RS09575 IPR000600 ROK CDO28_RS09580 IPR005627 Copper homeostasis protein CutC CDO28_RS09580 IPR023648 Copper homeostasis CutC domain CDO28_RS09590 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CDO28_RS09590 IPR006680 Amidohydrolase 1 CDO28_RS09590 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS09590 IPR032466 CDO28_RS09590 CDO28_RS09595 IPR001347 Sugar isomerase (SIS) CDO28_RS09600 IPR000524 Transcription regulator HTH, GntR CDO28_RS09600 IPR011663 UbiC transcription regulator-associated CDO28_RS09600 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS09600 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CDO28_RS09605 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CDO28_RS09610 IPR001347 Sugar isomerase (SIS) CDO28_RS09620 IPR000515 MetI-like domain CDO28_RS09625 IPR000515 MetI-like domain CDO28_RS09630 IPR000683 Oxidoreductase, N-terminal CDO28_RS09630 IPR016040 NAD(P)-binding domain CDO28_RS09635 IPR003439 ABC transporter-like CDO28_RS09635 IPR003593 AAA+ ATPase domain CDO28_RS09635 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS09635 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS09635 IPR013611 Transport-associated OB, type 2 CDO28_RS09635 IPR017871 ABC transporter, conserved site CDO28_RS09635 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09640 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS09640 IPR032317 CDO28_RS09640 CDO28_RS09645 IPR001036 Acriflavin resistance protein CDO28_RS09645 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CDO28_RS09645 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDO28_RS09650 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS09650 IPR009057 Homeodomain-like CDO28_RS09650 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS09650 IPR013572 Transcription regulator MAATS, C-terminal CDO28_RS09650 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS09650 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDO28_RS09655 IPR000182 GNAT domain CDO28_RS09655 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS09660 IPR000594 UBA/THIF-type NAD/FAD binding fold CDO28_RS09660 IPR016040 NAD(P)-binding domain CDO28_RS09665 IPR001238 DNA-binding, RecF CDO28_RS09665 IPR003395 RecF/RecN/SMC, N-terminal CDO28_RS09665 IPR003593 AAA+ ATPase domain CDO28_RS09665 IPR018078 DNA-binding, RecF, conserved site CDO28_RS09665 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09670 IPR018445 Putitive phosphate transport regulator CDO28_RS09675 IPR001204 Phosphate transporter CDO28_RS09680 IPR009758 Protein of unknown function DUF1326 CDO28_RS09680 IPR014581 Uncharacterised conserved protein UCP033303 CDO28_RS09685 IPR018688 Protein of unknown function DUF2182, transmembrane, metal-binding CDO28_RS09690 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CDO28_RS09690 IPR001623 DnaJ domain CDO28_RS09690 IPR002939 Chaperone DnaJ, C-terminal CDO28_RS09690 IPR008971 HSP40/DnaJ peptide-binding CDO28_RS09690 IPR012724 Chaperone DnaJ CDO28_RS09690 IPR018253 DnaJ domain, conserved site CDO28_RS09695 IPR012725 Chaperone DnaK CDO28_RS09695 IPR013126 Heat shock protein 70 family CDO28_RS09695 IPR018181 Heat shock protein 70, conserved site CDO28_RS09695 IPR029047 Heat shock protein 70kD, peptide-binding domain CDO28_RS09695 IPR029048 Heat shock protein 70kD, C-terminal domain CDO28_RS09700 IPR001264 Glycosyl transferase, family 51 CDO28_RS09700 IPR001460 Penicillin-binding protein, transpeptidase CDO28_RS09700 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS09700 IPR023346 Lysozyme-like domain CDO28_RS09705 IPR000620 Drug/metabolite transporter CDO28_RS09715 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CDO28_RS09720 IPR002933 Peptidase M20 CDO28_RS09720 IPR011650 Peptidase M20, dimerisation domain CDO28_RS09725 IPR000835 MarR-type HTH domain CDO28_RS09725 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS09725 IPR023187 Transcriptional regulator MarR-type, conserved site CDO28_RS09730 IPR001098 DNA-directed DNA polymerase, family A, palm domain CDO28_RS09730 IPR002298 DNA polymerase A CDO28_RS09730 IPR002421 5'-3' exonuclease, N-terminal CDO28_RS09730 IPR002562 3'-5' exonuclease domain CDO28_RS09730 IPR008918 Helix-hairpin-helix motif, class 2 CDO28_RS09730 IPR012337 Ribonuclease H-like domain CDO28_RS09730 IPR013520 Exonuclease, RNase T/DNA polymerase III CDO28_RS09730 IPR018320 DNA polymerase 1 CDO28_RS09730 IPR019760 DNA-directed DNA polymerase, family A, conserved site CDO28_RS09730 IPR020045 5'-3' exonuclease, C-terminal domain CDO28_RS09730 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CDO28_RS09730 IPR029060 PIN domain-like CDO28_RS09735 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDO28_RS09735 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS09735 IPR016040 NAD(P)-binding domain CDO28_RS09735 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDO28_RS09735 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDO28_RS09740 IPR003646 SH3-like domain, bacterial-type CDO28_RS09740 IPR010466 Protein of unknown function DUF1058 CDO28_RS09745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09750 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CDO28_RS09750 IPR011611 Carbohydrate kinase PfkB CDO28_RS09750 IPR029056 Ribokinase-like CDO28_RS09755 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS09755 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS09760 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS09760 IPR009057 Homeodomain-like CDO28_RS09760 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS09765 IPR000445 Helix-hairpin-helix motif CDO28_RS09765 IPR003265 HhH-GPD domain CDO28_RS09765 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CDO28_RS09765 IPR004036 Endonuclease III-like, conserved site-2 CDO28_RS09765 IPR005759 Endonuclease III CDO28_RS09765 IPR011257 DNA glycosylase CDO28_RS09765 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CDO28_RS09770 IPR016990 Uncharacterised conserved protein UCP032162, transmembrane CDO28_RS09770 IPR019253 Protein of unknown function DUF2244, transmembrane CDO28_RS09775 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CDO28_RS09775 IPR009057 Homeodomain-like CDO28_RS09775 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS09775 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CDO28_RS09775 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS09780 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CDO28_RS09780 IPR005952 Phosphoglycerate mutase 1 CDO28_RS09780 IPR013078 Histidine phosphatase superfamily, clade-1 CDO28_RS09780 IPR029033 Histidine phosphatase superfamily CDO28_RS09785 IPR000846 Dihydrodipicolinate reductase, N-terminal CDO28_RS09785 IPR016040 NAD(P)-binding domain CDO28_RS09785 IPR022663 Dihydrodipicolinate reductase, C-terminal CDO28_RS09785 IPR022664 Dihydrodipicolinate reductase, conserved site CDO28_RS09785 IPR023940 Dihydrodipicolinate reductase, bacterial CDO28_RS09790 IPR003439 ABC transporter-like CDO28_RS09790 IPR003593 AAA+ ATPase domain CDO28_RS09790 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS09790 IPR017871 ABC transporter, conserved site CDO28_RS09790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09795 IPR003836 Glucokinase CDO28_RS09800 IPR004363 Methylglyoxal synthase CDO28_RS09800 IPR011607 Methylglyoxal synthase-like domain CDO28_RS09800 IPR018148 Methylglyoxal synthase, active site CDO28_RS09805 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase CDO28_RS09805 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CDO28_RS09810 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS09810 IPR030678 CDO28_RS09810 CDO28_RS09815 IPR000515 MetI-like domain CDO28_RS09820 IPR000515 MetI-like domain CDO28_RS09820 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDO28_RS09825 IPR003439 ABC transporter-like CDO28_RS09825 IPR003593 AAA+ ATPase domain CDO28_RS09825 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS09825 IPR017871 ABC transporter, conserved site CDO28_RS09825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09830 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS09830 IPR016040 NAD(P)-binding domain CDO28_RS09835 IPR000064 Endopeptidase, NLPC/P60 domain CDO28_RS09835 IPR001452 SH3 domain CDO28_RS09840 IPR000835 MarR-type HTH domain CDO28_RS09840 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS09845 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CDO28_RS09845 IPR011356 Leucine aminopeptidase/peptidase B CDO28_RS09850 IPR011990 Tetratricopeptide-like helical domain CDO28_RS09850 IPR014596 Uncharacterised conserved protein UCP035836 CDO28_RS09855 IPR002559 Transposase, IS4-like CDO28_RS09855 IPR012337 Ribonuclease H-like domain CDO28_RS09855 IPR014736 Transposase, Tn5-like, core CDO28_RS09855 IPR025399 Domain of unknown function DUF4372 CDO28_RS09860 IPR018076 Type II secretion system F domain CDO28_RS09865 IPR018076 Type II secretion system F domain CDO28_RS09870 IPR001482 Type II secretion system protein E CDO28_RS09870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09875 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDO28_RS09875 IPR011006 CheY-like superfamily CDO28_RS09875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09880 IPR013361 Pilus biogenesis CpaD CDO28_RS09880 IPR019027 Pilus biogenesis CpaD-related CDO28_RS09885 IPR001775 GspD/PilQ family CDO28_RS09885 IPR004846 Type II/III secretion system CDO28_RS09885 IPR007055 BON domain CDO28_RS09885 IPR032789 CDO28_RS09885 CDO28_RS09890 IPR013974 SAF domain CDO28_RS09890 IPR017592 Pilus assembly, Flp-type CpaB CDO28_RS09890 IPR031571 CDO28_RS09890 CDO28_RS09895 IPR000045 Prepilin type IV endopeptidase, peptidase domain CDO28_RS09900 IPR007047 Flp/Fap pilin component CDO28_RS09905 IPR032789 CDO28_RS09905 CDO28_RS09910 IPR012495 TadE-like CDO28_RS09915 IPR012495 TadE-like CDO28_RS09920 IPR006124 Metalloenzyme CDO28_RS09920 IPR010045 Phosphopentomutase CDO28_RS09920 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CDO28_RS09920 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS09920 IPR024052 Phosphopentomutase DeoB cap domain CDO28_RS09925 IPR001365 Adenosine/AMP deaminase domain CDO28_RS09925 IPR006330 Adenosine/adenine deaminase CDO28_RS09925 IPR028892 Adenine deaminase type 2 CDO28_RS09925 IPR032466 CDO28_RS09925 CDO28_RS09930 IPR005765 Uracil phosphoribosyl transferase CDO28_RS09930 IPR029057 Phosphoribosyltransferase-like CDO28_RS09935 IPR000053 Pyrimidine-nucleoside phosphorylase CDO28_RS09935 IPR000312 Glycosyl transferase, family 3 CDO28_RS09935 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal CDO28_RS09935 IPR013465 Thymidine phosphorylase CDO28_RS09935 IPR017459 Glycosyl transferase family 3, N-terminal domain CDO28_RS09935 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site CDO28_RS09935 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic CDO28_RS09940 IPR000845 Nucleoside phosphorylase domain CDO28_RS09940 IPR011268 Purine nucleoside phosphorylase CDO28_RS09940 IPR011269 Putative purine nucleotide phosphorylase CDO28_RS09945 IPR002125 CMP/dCMP deaminase, zinc-binding CDO28_RS09945 IPR006262 Cytidine deaminase, homotetrameric CDO28_RS09945 IPR016192 APOBEC/CMP deaminase, zinc-binding CDO28_RS09945 IPR016193 Cytidine deaminase-like CDO28_RS09950 IPR001851 ABC transporter, permease CDO28_RS09955 IPR001851 ABC transporter, permease CDO28_RS09960 IPR003439 ABC transporter-like CDO28_RS09960 IPR003593 AAA+ ATPase domain CDO28_RS09960 IPR017871 ABC transporter, conserved site CDO28_RS09960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS09965 IPR002559 Transposase, IS4-like CDO28_RS09965 IPR032806 CDO28_RS09965 CDO28_RS09980 IPR001757 Cation-transporting P-type ATPase CDO28_RS09980 IPR006121 Heavy metal-associated domain, HMA CDO28_RS09980 IPR008250 P-type ATPase, A domain CDO28_RS09980 IPR017969 Heavy-metal-associated, conserved site CDO28_RS09980 IPR018303 P-type ATPase, phosphorylation site CDO28_RS09980 IPR023214 HAD-like domain CDO28_RS09980 IPR023299 P-type ATPase, cytoplasmic domain N CDO28_RS09980 IPR027256 Cation-transporting P-type ATPase, subfamily IB CDO28_RS09985 IPR000683 Oxidoreductase, N-terminal CDO28_RS09985 IPR004104 Oxidoreductase, C-terminal CDO28_RS09985 IPR016040 NAD(P)-binding domain CDO28_RS09990 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS09995 IPR029065 Enolase C-terminal domain-like CDO28_RS10000 IPR009334 Protein of unknown function DUF993 CDO28_RS10005 IPR000683 Oxidoreductase, N-terminal CDO28_RS10005 IPR004104 Oxidoreductase, C-terminal CDO28_RS10005 IPR016040 NAD(P)-binding domain CDO28_RS10010 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS10010 IPR009057 Homeodomain-like CDO28_RS10010 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS10010 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS10020 IPR000515 MetI-like domain CDO28_RS10025 IPR000515 MetI-like domain CDO28_RS10030 IPR000683 Oxidoreductase, N-terminal CDO28_RS10030 IPR004104 Oxidoreductase, C-terminal CDO28_RS10030 IPR016040 NAD(P)-binding domain CDO28_RS10035 IPR000683 Oxidoreductase, N-terminal CDO28_RS10035 IPR004104 Oxidoreductase, C-terminal CDO28_RS10035 IPR016040 NAD(P)-binding domain CDO28_RS10040 IPR003439 ABC transporter-like CDO28_RS10040 IPR003593 AAA+ ATPase domain CDO28_RS10040 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS10040 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS10040 IPR013611 Transport-associated OB, type 2 CDO28_RS10040 IPR017871 ABC transporter, conserved site CDO28_RS10040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10045 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS10045 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS10045 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS10045 IPR012336 Thioredoxin-like fold CDO28_RS10050 IPR005511 Senescence marker protein-30 (SMP-30) CDO28_RS10050 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS10050 IPR013658 SMP-30/Gluconolactonase/LRE-like region CDO28_RS10055 IPR000524 Transcription regulator HTH, GntR CDO28_RS10055 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS10055 IPR011711 GntR, C-terminal CDO28_RS10055 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS10060 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CDO28_RS10060 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDO28_RS10060 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CDO28_RS10065 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS10065 IPR016040 NAD(P)-binding domain CDO28_RS10070 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase CDO28_RS10070 IPR018969 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal CDO28_RS10070 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal CDO28_RS10070 IPR019789 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, thiamine diphosphate binding site CDO28_RS10070 IPR019790 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, conserved site CDO28_RS10070 IPR023962 Probable phosphoketolase CDO28_RS10070 IPR029061 Thiamin diphosphate-binding fold CDO28_RS10075 IPR002293 Amino acid/polyamine transporter I CDO28_RS10080 IPR006222 Glycine cleavage T-protein, N-terminal CDO28_RS10080 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDO28_RS10080 IPR018959 Domain of unknown function DUF1989 CDO28_RS10080 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDO28_RS10080 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CDO28_RS10085 IPR000960 Flavin monooxygenase FMO CDO28_RS10085 IPR020946 Flavin monooxygenase-like CDO28_RS10085 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS10090 IPR021848 Protein of unknown function DUF3445 CDO28_RS10095 IPR000951 Phthalate dioxygenase reductase CDO28_RS10095 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS10095 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDO28_RS10095 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS10095 IPR008333 Oxidoreductase, FAD-binding domain CDO28_RS10095 IPR012675 Beta-grasp domain CDO28_RS10095 IPR017938 Riboflavin synthase-like beta-barrel CDO28_RS10105 IPR006222 Glycine cleavage T-protein, N-terminal CDO28_RS10105 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDO28_RS10105 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDO28_RS10105 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA CDO28_RS10105 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CDO28_RS10110 IPR002376 Formyl transferase, N-terminal CDO28_RS10110 IPR004810 Formyltetrahydrofolate deformylase CDO28_RS10115 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS10115 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS10115 IPR011051 RmlC-like cupin domain CDO28_RS10115 IPR013096 Cupin 2, conserved barrel CDO28_RS10115 IPR014710 RmlC-like jelly roll fold CDO28_RS10135 IPR002293 Amino acid/polyamine transporter I CDO28_RS10150 IPR008146 Glutamine synthetase, catalytic domain CDO28_RS10150 IPR008147 Glutamine synthetase, beta-Grasp CDO28_RS10150 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDO28_RS10150 IPR017536 Glutamine synthetase, type III CDO28_RS10150 IPR027303 Glutamine synthetase, glycine-rich site CDO28_RS10155 IPR002932 Glutamate synthase domain CDO28_RS10155 IPR013785 Aldolase-type TIM barrel CDO28_RS10155 IPR024188 Glutamate synthase large subunit-like protein CDO28_RS10160 IPR002489 Glutamate synthase, alpha subunit, C-terminal CDO28_RS10160 IPR012061 Glutamate synthase, large subunit domain 3 stand-alone protein CDO28_RS10165 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS10170 IPR002818 ThiJ/PfpI CDO28_RS10170 IPR009057 Homeodomain-like CDO28_RS10170 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS10170 IPR018062 HTH domain AraC-type, conserved site CDO28_RS10170 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS10170 IPR029062 Class I glutamine amidotransferase-like CDO28_RS10175 IPR006076 FAD dependent oxidoreductase CDO28_RS10175 IPR006278 Sarcosine oxidase, beta subunit, heterotetrameric CDO28_RS10175 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS10180 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric CDO28_RS10185 IPR006222 Glycine cleavage T-protein, N-terminal CDO28_RS10185 IPR006277 Sarcosine oxidase, alpha subunit CDO28_RS10185 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDO28_RS10185 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS10185 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDO28_RS10185 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CDO28_RS10190 IPR007375 Sarcosine oxidase, gamma subunit CDO28_RS10195 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CDO28_RS10195 IPR016040 NAD(P)-binding domain CDO28_RS10195 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDO28_RS10195 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDO28_RS10195 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site CDO28_RS10205 IPR000644 CBS domain CDO28_RS10205 IPR007065 HPP CDO28_RS10210 IPR011051 RmlC-like cupin domain CDO28_RS10210 IPR013096 Cupin 2, conserved barrel CDO28_RS10210 IPR014710 RmlC-like jelly roll fold CDO28_RS10215 IPR000847 Transcription regulator HTH, LysR CDO28_RS10215 IPR005119 LysR, substrate-binding CDO28_RS10215 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS10220 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDO28_RS10220 IPR011821 O-succinylhomoserine (thiol)-lyase CDO28_RS10220 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS10220 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS10220 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS10225 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDO28_RS10225 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CDO28_RS10285 IPR027020 Protein ynjB CDO28_RS10290 IPR000515 MetI-like domain CDO28_RS10295 IPR003439 ABC transporter-like CDO28_RS10295 IPR003593 AAA+ ATPase domain CDO28_RS10295 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10300 IPR001650 Helicase, C-terminal CDO28_RS10300 IPR007502 Helicase-associated domain CDO28_RS10300 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type CDO28_RS10300 IPR011545 DEAD/DEAH box helicase domain CDO28_RS10300 IPR013689 RNA helicase, ATP-dependent, HrpB type, C-terminal CDO28_RS10300 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS10300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10305 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS10305 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS10305 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS10310 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS10310 IPR002197 DNA binding HTH domain, Fis-type CDO28_RS10310 IPR009057 Homeodomain-like CDO28_RS10310 IPR011006 CheY-like superfamily CDO28_RS10315 IPR009394 Protein of unknown function DUF1052 CDO28_RS10320 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS10325 IPR001465 Malate synthase CDO28_RS10325 IPR006253 Malate synthase G CDO28_RS10325 IPR011076 Malate synthase-like CDO28_RS10325 IPR023310 Malate synthase G, beta sub-domain CDO28_RS10330 IPR002821 Hydantoinase/oxoprolinase CDO28_RS10330 IPR008040 Hydantoinaseoxoprolinase, N-terminal CDO28_RS10335 IPR001128 Cytochrome P450 CDO28_RS10335 IPR002401 Cytochrome P450, E-class, group I CDO28_RS10335 IPR017972 Cytochrome P450, conserved site CDO28_RS10340 IPR009842 Protein of unknown function DUF1402 CDO28_RS10345 IPR003593 AAA+ ATPase domain CDO28_RS10345 IPR003959 ATPase, AAA-type, core CDO28_RS10345 IPR004491 Heat shock protein HslU CDO28_RS10345 IPR019489 Clp ATPase, C-terminal CDO28_RS10345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10350 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS10350 IPR019432 Siderophore biosynthesis protein, conserved domain CDO28_RS10355 IPR001353 Proteasome, subunit alpha/beta CDO28_RS10355 IPR022281 ATP-dependent protease, HslV subunit CDO28_RS10355 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS10360 IPR000807 Imidazoleglycerol-phosphate dehydratase CDO28_RS10360 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CDO28_RS10360 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS10365 IPR024399 Protein of unknown function DUF2628 CDO28_RS10370 IPR010139 Imidazole glycerol phosphate synthase, subunit H CDO28_RS10370 IPR017926 Glutamine amidotransferase CDO28_RS10370 IPR029062 Class I glutamine amidotransferase-like CDO28_RS10375 IPR006062 Histidine biosynthesis CDO28_RS10375 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CDO28_RS10375 IPR011060 Ribulose-phosphate binding barrel CDO28_RS10375 IPR013785 Aldolase-type TIM barrel CDO28_RS10375 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CDO28_RS10380 IPR004651 Histidine biosynthesis, HisF CDO28_RS10380 IPR006062 Histidine biosynthesis CDO28_RS10380 IPR011060 Ribulose-phosphate binding barrel CDO28_RS10380 IPR013785 Aldolase-type TIM barrel CDO28_RS10385 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CDO28_RS10385 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CDO28_RS10390 IPR004566 Bacterial pantothenate kinase CDO28_RS10390 IPR006083 Phosphoribulokinase/uridine kinase CDO28_RS10390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10395 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CDO28_RS10400 IPR007055 BON domain CDO28_RS10400 IPR014004 Transport-associated and nodulation domain, bacteria CDO28_RS10400 IPR018392 LysM domain CDO28_RS10405 IPR000352 Peptide chain release factor class I/class II CDO28_RS10410 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising CDO28_RS10410 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CDO28_RS10410 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CDO28_RS10410 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site CDO28_RS10415 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS10415 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS10415 IPR011006 CheY-like superfamily CDO28_RS10415 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS10415 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS10420 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS10420 IPR003660 HAMP linker domain CDO28_RS10420 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS10420 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS10420 IPR025908 Sensor N-terminal transmembrane domain CDO28_RS10420 IPR025919 Stimulus-sensing domain CDO28_RS10425 IPR011104 HPr kinase/phosphorylase, C-terminal CDO28_RS10425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10435 IPR004701 Phosphotransferase system, mannose-type IIA component CDO28_RS10440 IPR000032 Phosphocarrier HPr protein-like CDO28_RS10440 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CDO28_RS10445 IPR000043 Adenosylhomocysteinase CDO28_RS10445 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDO28_RS10445 IPR016040 NAD(P)-binding domain CDO28_RS10445 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site CDO28_RS10450 IPR000014 PAS domain CDO28_RS10450 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS10450 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS10450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS10455 IPR002575 Aminoglycoside phosphotransferase CDO28_RS10455 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CDO28_RS10455 IPR011009 Protein kinase-like domain CDO28_RS10455 IPR012180 Predicted bifunctional ATPase/phosphotransferase CDO28_RS10455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10460 IPR025877 MobA-like NTP transferase domain CDO28_RS10460 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS10465 IPR014153 Double-strand break repair protein AddB CDO28_RS10465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10470 IPR011335 Restriction endonuclease type II-like CDO28_RS10470 IPR014016 UvrD-like Helicase, ATP-binding domain CDO28_RS10470 IPR014017 DNA helicase, UvrD-like, C-terminal CDO28_RS10470 IPR014151 DNA helicase (double-strand break repair), AddA type CDO28_RS10470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10475 IPR005746 Thioredoxin CDO28_RS10475 IPR012336 Thioredoxin-like fold CDO28_RS10475 IPR013766 Thioredoxin domain CDO28_RS10475 IPR017937 Thioredoxin, conserved site CDO28_RS10480 IPR002559 Transposase, IS4-like CDO28_RS10480 IPR012337 Ribonuclease H-like domain CDO28_RS10480 IPR014736 Transposase, Tn5-like, core CDO28_RS10480 IPR025399 Domain of unknown function DUF4372 CDO28_RS10485 IPR001645 Folylpolyglutamate synthetase CDO28_RS10485 IPR004101 Mur ligase, C-terminal CDO28_RS10485 IPR013221 Mur ligase, central CDO28_RS10485 IPR018109 Folylpolyglutamate synthetase, conserved site CDO28_RS10490 IPR000022 Carboxyl transferase CDO28_RS10490 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CDO28_RS10490 IPR029045 ClpP/crotonase-like domain CDO28_RS10495 IPR002028 Tryptophan synthase, alpha chain CDO28_RS10495 IPR011060 Ribulose-phosphate binding barrel CDO28_RS10495 IPR013785 Aldolase-type TIM barrel CDO28_RS10495 IPR018204 Tryptophan synthase, alpha chain, active site CDO28_RS10500 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDO28_RS10500 IPR006653 Tryptophan synthase, beta chain, conserved site CDO28_RS10500 IPR006654 Tryptophan synthase, beta chain CDO28_RS10500 IPR023026 Tryptophan synthase beta chain/beta chain-like CDO28_RS10505 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) like domain CDO28_RS10505 IPR011060 Ribulose-phosphate binding barrel CDO28_RS10505 IPR013785 Aldolase-type TIM barrel CDO28_RS10510 IPR002725 Protein of unknown function DUF45 CDO28_RS10515 IPR021273 Protein of unknown function DUF2852 CDO28_RS10520 IPR009656 PHB de-polymerase, C-terminal CDO28_RS10520 IPR010915 Polyhydroxyalkanoate depolymerase CDO28_RS10520 IPR029058 Alpha/Beta hydrolase fold CDO28_RS10525 IPR011032 GroES (chaperonin 10)-like CDO28_RS10525 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS10525 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS10525 IPR016040 NAD(P)-binding domain CDO28_RS10530 IPR001851 ABC transporter, permease CDO28_RS10535 IPR003439 ABC transporter-like CDO28_RS10535 IPR003593 AAA+ ATPase domain CDO28_RS10535 IPR017871 ABC transporter, conserved site CDO28_RS10535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10540 IPR025997 Periplasmic binding protein domain CDO28_RS10540 IPR028082 Periplasmic binding protein-like I CDO28_RS10545 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS10550 IPR007392 D-galactarate dehydratase/Altronate hydrolase, C-terminal CDO28_RS10550 IPR013974 SAF domain CDO28_RS10555 IPR000524 Transcription regulator HTH, GntR CDO28_RS10555 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS10555 IPR011711 GntR, C-terminal CDO28_RS10555 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS10560 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CDO28_RS10560 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase CDO28_RS10560 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS10565 IPR010102 Succinate semialdehyde dehydrogenase CDO28_RS10565 IPR015590 Aldehyde dehydrogenase domain CDO28_RS10565 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS10565 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS10565 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS10565 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS10565 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS10570 IPR000415 Nitroreductase-like CDO28_RS10570 IPR029479 Nitroreductase CDO28_RS10575 IPR000565 DNA topoisomerase, type IIA, subunit B CDO28_RS10575 IPR001241 DNA topoisomerase, type IIA CDO28_RS10575 IPR002288 DNA gyrase B subunit, C-terminal CDO28_RS10575 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS10575 IPR006171 Toprim domain CDO28_RS10575 IPR011557 DNA gyrase, subunit B CDO28_RS10575 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CDO28_RS10575 IPR013759 DNA topoisomerase, type IIA, central domain CDO28_RS10575 IPR013760 DNA topoisomerase, type IIA-like domain CDO28_RS10575 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS10575 IPR018522 DNA topoisomerase, type IIA, conserved site CDO28_RS10575 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS10580 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS10580 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS10585 IPR002625 Smr protein/MutS2 C-terminal CDO28_RS10590 IPR005300 Lytic transglycosylase MltA CDO28_RS10590 IPR009009 RlpA-like double-psi beta-barrel domain CDO28_RS10590 IPR010611 3D domain CDO28_RS10590 IPR026044 Membrane-bound lytic murein transglycosylase A CDO28_RS10595 IPR007379 Tim44-like domain CDO28_RS10595 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related CDO28_RS10595 IPR032710 CDO28_RS10595 CDO28_RS10600 IPR007313 FxsA cytoplasmic membrane protein CDO28_RS10605 IPR003708 Bacterial protein export chaperone SecB CDO28_RS10610 IPR006054 DNA polymerase III, epsilon subunit CDO28_RS10610 IPR006309 DNA polymerase 3, epsilon subunit CDO28_RS10610 IPR012337 Ribonuclease H-like domain CDO28_RS10610 IPR013520 Exonuclease, RNase T/DNA polymerase III CDO28_RS10615 IPR001977 Dephospho-CoA kinase CDO28_RS10615 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10620 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CDO28_RS10620 IPR011342 Shikimate dehydrogenase CDO28_RS10620 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CDO28_RS10620 IPR016040 NAD(P)-binding domain CDO28_RS10620 IPR022893 Shikimate, quinate/shikimate dehydrogenase CDO28_RS10625 IPR003697 Maf-like protein CDO28_RS10625 IPR029001 Inosine triphosphate pyrophosphatase-like CDO28_RS10630 IPR005177 Bifunctional kinase-pyrophosphorylase CDO28_RS10630 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein CDO28_RS10635 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CDO28_RS10635 IPR006361 Uroporphyrinogen decarboxylase HemE CDO28_RS10640 IPR005265 Uncharacterised protein family UPF0093 CDO28_RS10640 IPR014351 Conserved hypothetical protein CHP00701 CDO28_RS10645 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CDO28_RS10645 IPR003593 AAA+ ATPase domain CDO28_RS10645 IPR004665 Transcription termination factor Rho CDO28_RS10645 IPR011112 Rho termination factor, N-terminal CDO28_RS10645 IPR011113 Rho termination factor, RNA-binding CDO28_RS10645 IPR011129 Cold shock protein CDO28_RS10645 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS10645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10650 IPR004520 tRNA modification GTPase MnmE CDO28_RS10650 IPR005225 Small GTP-binding protein domain CDO28_RS10650 IPR006073 GTP binding domain CDO28_RS10650 IPR018948 GTP-binding protein TrmE, N-terminal CDO28_RS10650 IPR025867 tRNA modification GTPase MnmE C-terminal domain CDO28_RS10650 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDO28_RS10650 IPR027368 tRNA modification GTPase MnmE domain 2 CDO28_RS10650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10655 IPR002218 Glucose-inhibited division protein A-related CDO28_RS10655 IPR004416 Glucose-inhibited division protein A CDO28_RS10655 IPR020595 Glucose-inhibited division protein A-related, conserved site CDO28_RS10655 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS10655 IPR026904 GidA associated domain 3 CDO28_RS10660 IPR003682 rRNA small subunit methyltransferase G CDO28_RS10660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS10665 IPR025669 AAA domain CDO28_RS10665 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10670 IPR003115 ParB/Sulfiredoxin CDO28_RS10670 IPR004437 ParB/RepB/Spo0J partition protein family CDO28_RS10675 IPR005790 DNA polymerase III, delta subunit CDO28_RS10675 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CDO28_RS10675 IPR010372 DNA polymerase III, delta CDO28_RS10675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10680 IPR007485 Lipopolysaccharide assembly, LptE CDO28_RS10685 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDO28_RS10685 IPR002300 Aminoacyl-tRNA synthetase, class Ia CDO28_RS10685 IPR002302 Leucine-tRNA ligase CDO28_RS10685 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CDO28_RS10685 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CDO28_RS10685 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CDO28_RS10685 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS10685 IPR025709 Leucyl-tRNA synthetase, editing domain CDO28_RS10690 IPR001608 Alanine racemase, N-terminal CDO28_RS10690 IPR011078 Uncharacterised protein family UPF0001 CDO28_RS10690 IPR029066 PLP-binding barrel CDO28_RS10695 IPR000873 AMP-dependent synthetase/ligase CDO28_RS10695 IPR020845 AMP-binding, conserved site CDO28_RS10695 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS10695 IPR032387 CDO28_RS10695 CDO28_RS10705 IPR010421 Protein of unknown function DUF1013 CDO28_RS10710 IPR000873 AMP-dependent synthetase/ligase CDO28_RS10710 IPR011904 Acetate-CoA ligase CDO28_RS10710 IPR020845 AMP-binding, conserved site CDO28_RS10710 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS10710 IPR032387 CDO28_RS10710 CDO28_RS10715 IPR012875 Protein of unknown function DUF1674 CDO28_RS10720 IPR001915 Peptidase M48 CDO28_RS10720 IPR022919 Peptidase M48, protease HtpX, putative CDO28_RS10725 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p CDO28_RS10725 IPR006027 NusB/RsmB/TIM44 CDO28_RS10725 IPR023267 RNA (C5-cytosine) methyltransferase CDO28_RS10725 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS10730 IPR012480 Heparinase II/III-like CDO28_RS10735 IPR002695 AICARFT/IMPCHase bienzyme CDO28_RS10735 IPR011607 Methylglyoxal synthase-like domain CDO28_RS10735 IPR016193 Cytidine deaminase-like CDO28_RS10735 IPR024051 AICAR transformylase domain CDO28_RS10745 IPR020846 Major facilitator superfamily domain CDO28_RS10745 IPR024671 Autophagy-related protein 22-like CDO28_RS10750 IPR007780 Bacterial NAD-glutamate dehydrogenase CDO28_RS10750 IPR016040 NAD(P)-binding domain CDO28_RS10750 IPR028971 NAD-glutamate dehydrogenase CDO28_RS10755 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase CDO28_RS10755 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CDO28_RS10755 IPR029056 Ribokinase-like CDO28_RS10760 IPR001765 Carbonic anhydrase CDO28_RS10760 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CDO28_RS10770 IPR023346 Lysozyme-like domain CDO28_RS10770 IPR031304 CDO28_RS10770 CDO28_RS10775 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDO28_RS10775 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type CDO28_RS10775 IPR012080 Aspartate-semialdehyde dehydrogenase CDO28_RS10775 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CDO28_RS10775 IPR016040 NAD(P)-binding domain CDO28_RS10785 IPR007159 AbrB-like domain CDO28_RS10790 IPR002716 PIN domain CDO28_RS10790 IPR022907 VapC family CDO28_RS10790 IPR029060 PIN domain-like CDO28_RS10795 IPR005828 General substrate transporter CDO28_RS10795 IPR005829 Sugar transporter, conserved site CDO28_RS10795 IPR020846 Major facilitator superfamily domain CDO28_RS10800 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CDO28_RS10805 IPR004429 Isopropylmalate dehydrogenase CDO28_RS10805 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CDO28_RS10805 IPR024084 Isopropylmalate dehydrogenase-like domain CDO28_RS10810 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS10815 IPR001567 Peptidase M3A/M3B CDO28_RS10815 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 CDO28_RS10815 IPR024079 Metallopeptidase, catalytic domain CDO28_RS10815 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CDO28_RS10820 IPR009334 Protein of unknown function DUF993 CDO28_RS10820 IPR013785 Aldolase-type TIM barrel CDO28_RS10825 IPR000843 Transcription regulator HTH, LacI CDO28_RS10825 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS10825 IPR028082 Periplasmic binding protein-like I CDO28_RS10830 IPR000683 Oxidoreductase, N-terminal CDO28_RS10830 IPR004104 Oxidoreductase, C-terminal CDO28_RS10830 IPR016040 NAD(P)-binding domain CDO28_RS10835 IPR004165 Coenzyme A transferase family I CDO28_RS10835 IPR014388 3-oxoacid CoA-transferase CDO28_RS10840 IPR001753 Crotonase superfamily CDO28_RS10840 IPR029045 ClpP/crotonase-like domain CDO28_RS10845 IPR015590 Aldehyde dehydrogenase domain CDO28_RS10845 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS10845 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS10845 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS10845 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS10845 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS10850 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS10855 IPR000515 MetI-like domain CDO28_RS10860 IPR000515 MetI-like domain CDO28_RS10865 IPR003439 ABC transporter-like CDO28_RS10865 IPR003593 AAA+ ATPase domain CDO28_RS10865 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS10865 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS10865 IPR013611 Transport-associated OB, type 2 CDO28_RS10865 IPR017871 ABC transporter, conserved site CDO28_RS10865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10870 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CDO28_RS10870 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CDO28_RS10870 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS10875 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS10875 IPR016040 NAD(P)-binding domain CDO28_RS10875 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS10880 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CDO28_RS10880 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CDO28_RS10880 IPR012132 Glucose-methanol-choline oxidoreductase CDO28_RS10880 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS10885 IPR007835 MOFRL domain CDO28_RS10885 IPR025286 MOFRL-associated domain CDO28_RS10890 IPR005814 Aminotransferase class-III CDO28_RS10890 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS10890 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS10890 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS10895 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS10895 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS10895 IPR011051 RmlC-like cupin domain CDO28_RS10895 IPR013096 Cupin 2, conserved barrel CDO28_RS10895 IPR014710 RmlC-like jelly roll fold CDO28_RS10900 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDO28_RS10900 IPR004839 Aminotransferase, class I/classII CDO28_RS10900 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS10900 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS10900 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS10905 IPR015590 Aldehyde dehydrogenase domain CDO28_RS10905 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS10905 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS10905 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS10905 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS10910 IPR004113 FAD-linked oxidase, C-terminal CDO28_RS10910 IPR006094 FAD linked oxidase, N-terminal CDO28_RS10910 IPR016164 FAD-linked oxidase-like, C-terminal CDO28_RS10910 IPR016166 FAD-binding, type 2 CDO28_RS10910 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS10910 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS10915 IPR009770 Domain of unknown function DUF1338 CDO28_RS10920 IPR000847 Transcription regulator HTH, LysR CDO28_RS10920 IPR005119 LysR, substrate-binding CDO28_RS10920 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS10930 IPR005196 Glycoside hydrolase, family 65, N-terminal CDO28_RS10930 IPR008928 Six-hairpin glycosidase-like CDO28_RS10930 IPR009342 Putative carbohydrate binding domain CDO28_RS10930 IPR010383 Glycosyltransferase 36 CDO28_RS10930 IPR011013 Galactose mutarotase-like domain CDO28_RS10930 IPR019282 Domain of unknown function DUF2329 CDO28_RS10930 IPR021478 Protein of unknown function DUF3131 CDO28_RS10930 IPR033432 CDO28_RS10930 CDO28_RS10935 IPR014550 Uncharacterised conserved protein UCP028704, OpgC CDO28_RS10945 IPR003439 ABC transporter-like CDO28_RS10945 IPR003593 AAA+ ATPase domain CDO28_RS10945 IPR005896 Glucan exporter ATP-binding protein, NdvA CDO28_RS10945 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS10945 IPR017871 ABC transporter, conserved site CDO28_RS10945 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10950 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS10950 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CDO28_RS10950 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS10950 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS10955 IPR000089 Biotin/lipoyl attachment CDO28_RS10955 IPR000891 Pyruvate carboxyltransferase CDO28_RS10955 IPR001882 Biotin-binding site CDO28_RS10955 IPR003379 Carboxylase, conserved domain CDO28_RS10955 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDO28_RS10955 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CDO28_RS10955 IPR005482 Biotin carboxylase, C-terminal CDO28_RS10955 IPR005930 Pyruvate carboxylase CDO28_RS10955 IPR009057 Homeodomain-like CDO28_RS10955 IPR011053 Single hybrid motif CDO28_RS10955 IPR011054 Rudiment single hybrid motif CDO28_RS10955 IPR013785 Aldolase-type TIM barrel CDO28_RS10955 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS10955 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS10955 IPR016185 Pre-ATP-grasp domain CDO28_RS10960 IPR003439 ABC transporter-like CDO28_RS10960 IPR003593 AAA+ ATPase domain CDO28_RS10960 IPR017871 ABC transporter, conserved site CDO28_RS10960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS10960 IPR030679 CDO28_RS10960 CDO28_RS10965 IPR000515 MetI-like domain CDO28_RS10965 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS10970 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS10970 IPR018313 Extracellular solute-binding protein, family 3, conserved site CDO28_RS10975 IPR001034 HTH DeoR N-terminal domain CDO28_RS10975 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS10975 IPR014036 DeoR C-terminal sensor domain CDO28_RS10975 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CDO28_RS10980 IPR011701 Major facilitator superfamily CDO28_RS10980 IPR020846 Major facilitator superfamily domain CDO28_RS10985 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CDO28_RS10985 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CDO28_RS10990 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS10995 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CDO28_RS10995 IPR004839 Aminotransferase, class I/classII CDO28_RS10995 IPR005861 Histidinol-phosphate aminotransferase family CDO28_RS10995 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS10995 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS10995 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS11000 IPR000092 Polyprenyl synthetase CDO28_RS11000 IPR008949 Terpenoid synthase CDO28_RS11005 IPR001264 Glycosyl transferase, family 51 CDO28_RS11005 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase CDO28_RS11005 IPR023346 Lysozyme-like domain CDO28_RS11010 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS11010 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS11010 IPR012336 Thioredoxin-like fold CDO28_RS11015 IPR002677 Ribosomal protein L32p CDO28_RS11015 IPR011332 Zinc-binding ribosomal protein CDO28_RS11020 IPR007897 PHB accumulation regulatory CDO28_RS11020 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR CDO28_RS11020 IPR012909 PHA accumulation regulator DNA-binding, N-terminal CDO28_RS11025 IPR002155 Thiolase CDO28_RS11025 IPR016039 Thiolase-like CDO28_RS11025 IPR020610 Thiolase, active site CDO28_RS11025 IPR020613 Thiolase, conserved site CDO28_RS11025 IPR020615 Thiolase, acyl-enzyme intermediate active site CDO28_RS11025 IPR020616 Thiolase, N-terminal CDO28_RS11025 IPR020617 Thiolase, C-terminal CDO28_RS11030 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS11030 IPR011283 Acetoacetyl-CoA reductase CDO28_RS11030 IPR016040 NAD(P)-binding domain CDO28_RS11030 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS11035 IPR001650 Helicase, C-terminal CDO28_RS11035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11040 IPR002942 RNA-binding S4 domain CDO28_RS11045 IPR000813 7Fe ferredoxin CDO28_RS11045 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS11045 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS11045 IPR022569 Ferredoxin, C-terminal CDO28_RS11050 IPR003711 CarD-like/TRCF domain CDO28_RS11055 IPR000943 RNA polymerase sigma-70 CDO28_RS11055 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS11055 IPR007630 RNA polymerase sigma-70 region 4 CDO28_RS11055 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS11055 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS11055 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS11055 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS11055 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE CDO28_RS11060 IPR001915 Peptidase M48 CDO28_RS11065 IPR003439 ABC transporter-like CDO28_RS11065 IPR003593 AAA+ ATPase domain CDO28_RS11065 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ CDO28_RS11065 IPR017871 ABC transporter, conserved site CDO28_RS11065 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11070 IPR000515 MetI-like domain CDO28_RS11070 IPR005947 Thiamine ABC transporter, permease protein CDO28_RS11075 IPR005948 Thiamine ABC transporter periplasmic binding protein CDO28_RS11075 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein CDO28_RS11080 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS11085 IPR006282 Thiamin pyrophosphokinase CDO28_RS11085 IPR007371 Thiamin pyrophosphokinase, catalytic domain CDO28_RS11085 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain CDO28_RS11090 IPR003439 ABC transporter-like CDO28_RS11090 IPR003593 AAA+ ATPase domain CDO28_RS11090 IPR017871 ABC transporter, conserved site CDO28_RS11090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11090 IPR032524 CDO28_RS11090 CDO28_RS11095 IPR000515 MetI-like domain CDO28_RS11095 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS11100 IPR001320 Ionotropic glutamate receptor CDO28_RS11100 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS11105 IPR001857 Ribosomal protein L19 CDO28_RS11105 IPR008991 Translation protein SH3-like domain CDO28_RS11105 IPR018257 Ribosomal protein L19, conserved site CDO28_RS11110 IPR002781 Transmembrane protein TauE like CDO28_RS11115 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CDO28_RS11115 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CDO28_RS11115 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CDO28_RS11115 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDO28_RS11115 IPR029028 Alpha/beta knot methyltransferases CDO28_RS11120 IPR002676 RimM protein CDO28_RS11120 IPR009000 Translation protein, beta-barrel domain CDO28_RS11120 IPR011033 PRC-barrel-like CDO28_RS11120 IPR011961 16S rRNA processing protein RimM CDO28_RS11120 IPR027275 PRC-barrel domain CDO28_RS11125 IPR000307 Ribosomal protein S16 CDO28_RS11125 IPR023803 Ribosomal protein S16 domain CDO28_RS11130 IPR002701 Chorismate mutase CDO28_RS11130 IPR010951 Chorismate mutase, bacteria CDO28_RS11130 IPR020822 Chorismate mutase, type II CDO28_RS11135 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CDO28_RS11135 IPR003593 AAA+ ATPase domain CDO28_RS11135 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CDO28_RS11135 IPR004780 Signal recognition particle protein Ffh CDO28_RS11135 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle CDO28_RS11135 IPR022941 Signal recognition particle, SRP54 subunit CDO28_RS11135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11140 IPR001653 Diaminopimelate epimerase, DapF CDO28_RS11140 IPR018510 Diaminopimelate epimerase, active site CDO28_RS11145 IPR005839 Methylthiotransferase CDO28_RS11145 IPR006467 MiaB-like tRNA modifying enzyme CDO28_RS11145 IPR006638 Elongator protein 3/MiaB/NifB CDO28_RS11145 IPR007197 Radical SAM CDO28_RS11145 IPR013848 Methylthiotransferase, N-terminal CDO28_RS11145 IPR020612 Methylthiotransferase, conserved site CDO28_RS11145 IPR023404 Radical SAM, alpha/beta horseshoe CDO28_RS11150 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CDO28_RS11150 IPR003593 AAA+ ATPase domain CDO28_RS11150 IPR004390 Signal-recognition particle receptor FtsY CDO28_RS11150 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle CDO28_RS11150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11155 IPR006008 Intracellular septation protein A CDO28_RS11160 IPR019691 Protein of unknown function DUF2585 CDO28_RS11165 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE CDO28_RS11165 IPR012336 Thioredoxin-like fold CDO28_RS11165 IPR013740 Redoxin CDO28_RS11165 IPR017937 Thioredoxin, conserved site CDO28_RS11170 IPR007078 Haem exporter protein D (CcmD) CDO28_RS11175 IPR002541 Cytochrome c assembly protein CDO28_RS11175 IPR003557 Cytochrome c-type biogenesis protein CcmC CDO28_RS11180 IPR003544 Cytochrome c-type biogenesis protein CcmB CDO28_RS11180 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CDO28_RS11185 IPR003439 ABC transporter-like CDO28_RS11185 IPR003593 AAA+ ATPase domain CDO28_RS11185 IPR005895 ABC transporter, haem export, CcmA CDO28_RS11185 IPR017871 ABC transporter, conserved site CDO28_RS11185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11190 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel CDO28_RS11190 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha CDO28_RS11190 IPR006249 Aconitate/iron regulatory protein 2 CDO28_RS11190 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDO28_RS11190 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CDO28_RS11190 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 CDO28_RS11190 IPR018136 Aconitase family, 4Fe-4S cluster binding site CDO28_RS11195 IPR010634 Protein of unknown function DUF1223 CDO28_RS11195 IPR012336 Thioredoxin-like fold CDO28_RS11200 IPR021252 Protein of unknown function DUF2794 CDO28_RS11205 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS11205 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS11210 IPR023393 START-like domain CDO28_RS11215 IPR001907 ATP-dependent Clp protease proteolytic subunit CDO28_RS11215 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CDO28_RS11215 IPR029045 ClpP/crotonase-like domain CDO28_RS11215 IPR033135 CDO28_RS11215 CDO28_RS11220 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS11230 IPR003838 Permease FtsX-like CDO28_RS11235 IPR003439 ABC transporter-like CDO28_RS11235 IPR003593 AAA+ ATPase domain CDO28_RS11235 IPR017871 ABC transporter, conserved site CDO28_RS11235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11240 IPR013830 CDO28_RS11240 CDO28_RS11245 IPR004175 2',5' RNA ligase CDO28_RS11245 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CDO28_RS11245 IPR014051 Phosphoesterase, HXTX CDO28_RS11250 IPR001533 Transcriptional coactivator/pterin dehydratase CDO28_RS11255 IPR010652 Protein of unknown function DUF1232 CDO28_RS11255 IPR016983 Uncharacterised conserved protein UCP031804 CDO28_RS11260 IPR002559 Transposase, IS4-like CDO28_RS11260 IPR032806 CDO28_RS11260 CDO28_RS11270 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CDO28_RS11270 IPR007197 Radical SAM CDO28_RS11270 IPR013785 Aldolase-type TIM barrel CDO28_RS11270 IPR027492 Dual-specificity RNA methyltransferase RlmN CDO28_RS11275 IPR007487 ABC transporter, substrate-binding protein CDO28_RS11275 IPR028082 Periplasmic binding protein-like I CDO28_RS11280 IPR001851 ABC transporter, permease CDO28_RS11285 IPR003439 ABC transporter-like CDO28_RS11285 IPR003593 AAA+ ATPase domain CDO28_RS11285 IPR017871 ABC transporter, conserved site CDO28_RS11285 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11290 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS11295 IPR001518 Argininosuccinate synthase CDO28_RS11295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS11295 IPR018223 Argininosuccinate synthase, conserved site CDO28_RS11295 IPR023434 Argininosuccinate synthase, type 1 subfamily CDO28_RS11295 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CDO28_RS11300 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CDO28_RS11300 IPR011701 Major facilitator superfamily CDO28_RS11300 IPR020846 Major facilitator superfamily domain CDO28_RS11305 IPR000835 MarR-type HTH domain CDO28_RS11305 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS11305 IPR023187 Transcriptional regulator MarR-type, conserved site CDO28_RS11315 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha CDO28_RS11315 IPR004430 3-isopropylmalate dehydratase, large subunit CDO28_RS11315 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CDO28_RS11315 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 CDO28_RS11315 IPR018136 Aconitase family, 4Fe-4S cluster binding site CDO28_RS11320 IPR013078 Histidine phosphatase superfamily, clade-1 CDO28_RS11320 IPR029033 Histidine phosphatase superfamily CDO28_RS11330 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS11330 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS11330 IPR011006 CheY-like superfamily CDO28_RS11330 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS11335 IPR000595 Cyclic nucleotide-binding domain CDO28_RS11335 IPR014710 RmlC-like jelly roll fold CDO28_RS11335 IPR018490 Cyclic nucleotide-binding-like CDO28_RS11340 IPR004808 AP endonuclease 1 CDO28_RS11340 IPR005135 Endonuclease/exonuclease/phosphatase CDO28_RS11340 IPR020847 AP endonuclease 1, binding site CDO28_RS11345 IPR000600 ROK CDO28_RS11350 IPR000600 ROK CDO28_RS11350 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS11355 IPR003439 ABC transporter-like CDO28_RS11355 IPR003593 AAA+ ATPase domain CDO28_RS11355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11360 IPR001851 ABC transporter, permease CDO28_RS11365 IPR025997 Periplasmic binding protein domain CDO28_RS11365 IPR028082 Periplasmic binding protein-like I CDO28_RS11370 IPR000683 Oxidoreductase, N-terminal CDO28_RS11370 IPR016040 NAD(P)-binding domain CDO28_RS11375 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS11380 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS11380 IPR000639 Epoxide hydrolase-like CDO28_RS11380 IPR022742 Putative lysophospholipase CDO28_RS11380 IPR029058 Alpha/Beta hydrolase fold CDO28_RS11385 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CDO28_RS11385 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDO28_RS11390 IPR002543 FtsK domain CDO28_RS11390 IPR003593 AAA+ ATPase domain CDO28_RS11390 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS11390 IPR018541 FtsK gamma domain CDO28_RS11390 IPR025199 Domain of unknown function DUF4117 CDO28_RS11390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11395 IPR001905 Ammonium transporter CDO28_RS11395 IPR018047 Ammonium transporter, conserved site CDO28_RS11395 IPR024041 Ammonium transporter AmtB-like domain CDO28_RS11395 IPR029020 Ammonium/urea transporter CDO28_RS11400 IPR002187 Nitrogen regulatory protein PII CDO28_RS11400 IPR011322 Nitrogen regulatory PII-like, alpha/beta CDO28_RS11400 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CDO28_RS11400 IPR017918 Nitrogen regulatory protein PII, conserved site CDO28_RS11405 IPR003703 Acyl-CoA thioesterase CDO28_RS11405 IPR029069 HotDog domain CDO28_RS11410 IPR002938 Monooxygenase, FAD-binding CDO28_RS11410 IPR010971 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/UbiI/COQ6 CDO28_RS11410 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS11420 IPR005651 Uncharacterised protein family UPF0434/Trm112 CDO28_RS11425 IPR003111 Peptidase S16, lon N-terminal CDO28_RS11425 IPR015947 PUA-like domain CDO28_RS11430 IPR005746 Thioredoxin CDO28_RS11430 IPR011990 Tetratricopeptide-like helical domain CDO28_RS11430 IPR012336 Thioredoxin-like fold CDO28_RS11430 IPR013766 Thioredoxin domain CDO28_RS11430 IPR017937 Thioredoxin, conserved site CDO28_RS11435 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CDO28_RS11445 IPR003495 CobW/HypB/UreG domain CDO28_RS11445 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDO28_RS11445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11450 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CDO28_RS11450 IPR011013 Galactose mutarotase-like domain CDO28_RS11450 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CDO28_RS11450 IPR015443 Aldose 1-epimerase CDO28_RS11455 IPR005697 Homoserine O-succinyltransferase CDO28_RS11455 IPR029062 Class I glutamine amidotransferase-like CDO28_RS11460 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS11460 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS11465 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel CDO28_RS11465 IPR004431 3-isopropylmalate dehydratase, small subunit CDO28_RS11465 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDO28_RS11475 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CDO28_RS11475 IPR011206 Citrate lyase beta subunit-like CDO28_RS11475 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS11480 IPR013619 Domain of unknown function DUF1737 CDO28_RS11485 IPR010428 Protein of unknown function DUF1025 CDO28_RS11485 IPR024079 Metallopeptidase, catalytic domain CDO28_RS11490 IPR001126 DNA-repair protein, UmuC-like CDO28_RS11490 IPR017961 DNA polymerase, Y-family, little finger domain CDO28_RS11495 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDO28_RS11495 IPR004013 PHP, C-terminal CDO28_RS11495 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CDO28_RS11495 IPR004805 DNA polymerase III, alpha subunit CDO28_RS11495 IPR011708 Bacterial DNA polymerase III, alpha subunit CDO28_RS11495 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS11495 IPR016195 Polymerase/histidinol phosphatase-like CDO28_RS11495 IPR023073 DNA polymerase, error-prone CDO28_RS11495 IPR029460 DNA polymerase, helix-hairpin-helix motif CDO28_RS11505 IPR002024 Bacterioferritin CDO28_RS11505 IPR008331 Ferritin/DPS protein domain CDO28_RS11505 IPR009078 Ferritin-like superfamily CDO28_RS11505 IPR012347 Ferritin-related CDO28_RS11510 IPR000086 NUDIX hydrolase domain CDO28_RS11510 IPR015797 NUDIX hydrolase domain-like CDO28_RS11510 IPR020084 NUDIX hydrolase, conserved site CDO28_RS11510 IPR020476 NUDIX hydrolase CDO28_RS11510 IPR022927 RNA pyrophosphohydrolase RppH CDO28_RS11515 IPR002509 Polysaccharide deacetylase CDO28_RS11515 IPR006837 Protein of unknown function DUF610, YibQ CDO28_RS11515 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS11520 IPR001478 PDZ domain CDO28_RS11520 IPR004447 C-terminal-processing peptidase S41A CDO28_RS11520 IPR005151 Tail specific protease CDO28_RS11520 IPR029045 ClpP/crotonase-like domain CDO28_RS11525 IPR011055 Duplicated hybrid motif CDO28_RS11525 IPR016047 Peptidase M23 CDO28_RS11530 IPR003742 SPOUT methyltransferase, predicted CDO28_RS11530 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDO28_RS11530 IPR029028 Alpha/beta knot methyltransferases CDO28_RS11535 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CDO28_RS11540 IPR004821 Cytidyltransferase-like domain CDO28_RS11540 IPR005248 Probable nicotinate-nucleotide adenylyltransferase CDO28_RS11540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS11545 IPR000965 Gamma-glutamyl phosphate reductase GPR CDO28_RS11545 IPR012134 Glutamate-5-semialdehyde dehydrogenase CDO28_RS11545 IPR015590 Aldehyde dehydrogenase domain CDO28_RS11545 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS11545 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS11545 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS11545 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site CDO28_RS11550 IPR001048 Aspartate/glutamate/uridylate kinase CDO28_RS11550 IPR001057 Glutamate/acetylglutamate kinase CDO28_RS11550 IPR002478 PUA domain CDO28_RS11550 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CDO28_RS11550 IPR011529 Glutamate 5-kinase CDO28_RS11550 IPR015947 PUA-like domain CDO28_RS11550 IPR019797 Glutamate 5-kinase, conserved site CDO28_RS11555 IPR006073 GTP binding domain CDO28_RS11555 IPR006074 GTP1/OBG, conserved site CDO28_RS11555 IPR006169 GTP1/OBG domain CDO28_RS11555 IPR014100 GTP-binding protein Obg/CgtA CDO28_RS11555 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11560 IPR000182 GNAT domain CDO28_RS11560 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS11565 IPR000182 GNAT domain CDO28_RS11565 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS11570 IPR001684 Ribosomal protein L27 CDO28_RS11570 IPR018261 Ribosomal protein L27, conserved site CDO28_RS11575 IPR001787 Ribosomal protein L21 CDO28_RS11575 IPR028909 Ribosomal protein L21-like CDO28_RS11585 IPR007362 Protein of unknown function DUF429 CDO28_RS11585 IPR008306 Uncharacterised conserved protein UCP018008 CDO28_RS11600 IPR023631 Amidase signature domain CDO28_RS11605 IPR025309 KTSC domain CDO28_RS11610 IPR018946 Alkaline phosphatase D-related CDO28_RS11610 IPR029052 Metallo-dependent phosphatase-like CDO28_RS11610 IPR032093 CDO28_RS11610 CDO28_RS11615 IPR000640 Translation elongation factor EFG, V domain CDO28_RS11615 IPR000795 Elongation factor, GTP-binding domain CDO28_RS11615 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CDO28_RS11615 IPR005225 Small GTP-binding protein domain CDO28_RS11615 IPR006298 GTP-binding protein TypA CDO28_RS11615 IPR009000 Translation protein, beta-barrel domain CDO28_RS11615 IPR009022 Elongation factor G, III-V domain CDO28_RS11615 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11615 IPR031157 CDO28_RS11615 CDO28_RS11620 IPR000182 GNAT domain CDO28_RS11620 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS11630 IPR008162 Inorganic pyrophosphatase CDO28_RS11635 IPR003425 Uncharacterised protein family Ycf19 CDO28_RS11640 IPR010290 Transmembrane secretion effector CDO28_RS11640 IPR020846 Major facilitator superfamily domain CDO28_RS11645 IPR017926 Glutamine amidotransferase CDO28_RS11645 IPR029062 Class I glutamine amidotransferase-like CDO28_RS11650 IPR007791 Heat shock protein DnaJ-like protein DjlA CDO28_RS11650 IPR029024 TerB-like CDO28_RS11655 IPR010817 HemY, N-terminal CDO28_RS11655 IPR011990 Tetratricopeptide-like helical domain CDO28_RS11655 IPR016982 Uncharacterised conserved protein UCP031802 CDO28_RS11665 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CDO28_RS11670 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase CDO28_RS11670 IPR022417 Porphobilinogen deaminase, N-terminal CDO28_RS11670 IPR022418 Porphobilinogen deaminase, C-terminal CDO28_RS11670 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CDO28_RS11675 IPR000905 Gcp-like domain CDO28_RS11675 IPR017861 Kae1/YgjD family CDO28_RS11675 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CDO28_RS11680 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CDO28_RS11680 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CDO28_RS11680 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS11680 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CDO28_RS11680 IPR013328 Dehydrogenase, multihelical CDO28_RS11680 IPR016040 NAD(P)-binding domain CDO28_RS11685 IPR005545 YCII-related CDO28_RS11685 IPR011008 Dimeric alpha-beta barrel CDO28_RS11690 IPR002740 EVE domain CDO28_RS11690 IPR015947 PUA-like domain CDO28_RS11695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS11705 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit CDO28_RS11705 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit CDO28_RS11705 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site CDO28_RS11710 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit CDO28_RS11710 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor CDO28_RS11715 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CDO28_RS11715 IPR003953 FAD binding domain CDO28_RS11715 IPR011281 Succinate dehydrogenase, flavoprotein subunit CDO28_RS11715 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit CDO28_RS11715 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CDO28_RS11715 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS11715 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CDO28_RS11715 IPR030664 CDO28_RS11715 CDO28_RS11720 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS11720 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CDO28_RS11720 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS11720 IPR009051 Alpha-helical ferredoxin CDO28_RS11720 IPR012675 Beta-grasp domain CDO28_RS11720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS11720 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CDO28_RS11725 IPR002569 Peptide methionine sulphoxide reductase MsrA CDO28_RS11730 IPR029010 ThuA-like domain CDO28_RS11730 IPR029062 Class I glutamine amidotransferase-like CDO28_RS11735 IPR000683 Oxidoreductase, N-terminal CDO28_RS11735 IPR016040 NAD(P)-binding domain CDO28_RS11740 IPR000600 ROK CDO28_RS11740 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS11750 IPR000515 MetI-like domain CDO28_RS11755 IPR000515 MetI-like domain CDO28_RS11760 IPR003439 ABC transporter-like CDO28_RS11760 IPR003593 AAA+ ATPase domain CDO28_RS11760 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS11760 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS11760 IPR013611 Transport-associated OB, type 2 CDO28_RS11760 IPR017871 ABC transporter, conserved site CDO28_RS11760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11765 IPR003086 Metalloprotease inhibitor I38 CDO28_RS11765 IPR010571 Outer membrane lipoprotein, Omp19, bacterial CDO28_RS11765 IPR016085 Protease inhibitor, beta-barrel domain CDO28_RS11765 IPR021140 Alkaline proteinase inhibitor/ Outer membrane lipoprotein Omp19 CDO28_RS11770 IPR007711 Plasmid maintenance system killer CDO28_RS11775 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS11775 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS11775 IPR013430 Toxin-antitoxin system, antidote protein, HigA CDO28_RS11780 IPR005654 ATPase, AFG1-like CDO28_RS11780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11785 IPR001236 Lactate/malate dehydrogenase, N-terminal CDO28_RS11785 IPR001557 L-lactate/malate dehydrogenase CDO28_RS11785 IPR011275 Malate dehydrogenase, type 3 CDO28_RS11785 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CDO28_RS11785 IPR016040 NAD(P)-binding domain CDO28_RS11785 IPR022383 Lactate/malate dehydrogenase, C-terminal CDO28_RS11790 IPR005809 Succinyl-CoA synthetase, beta subunit CDO28_RS11790 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CDO28_RS11790 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CDO28_RS11790 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS11790 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS11790 IPR016102 Succinyl-CoA synthetase-like CDO28_RS11790 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CDO28_RS11795 IPR003781 CoA-binding CDO28_RS11795 IPR005810 Succinyl-CoA ligase, alpha subunit CDO28_RS11795 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CDO28_RS11795 IPR016040 NAD(P)-binding domain CDO28_RS11795 IPR016102 Succinyl-CoA synthetase-like CDO28_RS11795 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CDO28_RS11800 IPR001017 Dehydrogenase, E1 component CDO28_RS11800 IPR005475 Transketolase-like, pyrimidine-binding domain CDO28_RS11800 IPR011603 2-oxoglutarate dehydrogenase E1 component CDO28_RS11800 IPR029061 Thiamin diphosphate-binding fold CDO28_RS11800 IPR031717 CDO28_RS11800 CDO28_RS11800 IPR032106 CDO28_RS11800 CDO28_RS11805 IPR000089 Biotin/lipoyl attachment CDO28_RS11805 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CDO28_RS11805 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDO28_RS11805 IPR004167 E3 binding CDO28_RS11805 IPR006255 Dihydrolipoamide succinyltransferase CDO28_RS11805 IPR011053 Single hybrid motif CDO28_RS11805 IPR023213 Chloramphenicol acetyltransferase-like domain CDO28_RS11810 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS11820 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS11820 IPR016040 NAD(P)-binding domain CDO28_RS11820 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS11825 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS11825 IPR006258 Dihydrolipoamide dehydrogenase CDO28_RS11825 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDO28_RS11825 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS11825 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS11830 IPR002816 Pheromone shutdown, TraB CDO28_RS11835 IPR002104 Integrase, catalytic CDO28_RS11835 IPR004107 Integrase, SAM-like, N-terminal CDO28_RS11835 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS11835 IPR013762 Integrase-like, catalytic core CDO28_RS11835 IPR023009 Tyrosine recombinase XerC/XerD CDO28_RS11835 IPR023109 Integrase/recombinase, N-terminal CDO28_RS11840 IPR002123 Phospholipid/glycerol acyltransferase CDO28_RS11845 IPR003959 ATPase, AAA-type, core CDO28_RS11845 IPR014555 RecF-like CDO28_RS11845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11850 IPR007655 Protein of unknown function DUF560 CDO28_RS11855 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CDO28_RS11860 IPR029058 Alpha/Beta hydrolase fold CDO28_RS11865 IPR001585 Transaldolase CDO28_RS11865 IPR004731 Transaldolase 3A/3B CDO28_RS11865 IPR013785 Aldolase-type TIM barrel CDO28_RS11865 IPR018225 Transaldolase, active site CDO28_RS11865 IPR022999 Transaldolase 3B, putative CDO28_RS11870 IPR001650 Helicase, C-terminal CDO28_RS11870 IPR005259 Primosomal protein n CDO28_RS11870 IPR006935 Helicase/UvrB domain CDO28_RS11870 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS11870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11880 IPR000711 ATPase, OSCP/delta subunit CDO28_RS11880 IPR020781 ATPase, OSCP/delta subunit, conserved site CDO28_RS11880 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CDO28_RS11885 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CDO28_RS11885 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal CDO28_RS11885 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CDO28_RS11885 IPR005294 ATPase, F1 complex, alpha subunit CDO28_RS11885 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CDO28_RS11885 IPR023366 ATP synthase subunit alpha-like domain CDO28_RS11885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11890 IPR000131 ATPase, F1 complex, gamma subunit CDO28_RS11890 IPR023632 ATPase, F1 complex, gamma subunit conserved site CDO28_RS11890 IPR023633 ATPase, F1 complex, gamma subunit domain CDO28_RS11895 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CDO28_RS11895 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal CDO28_RS11895 IPR003593 AAA+ ATPase domain CDO28_RS11895 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CDO28_RS11895 IPR005722 ATPase, F1 complex, beta subunit CDO28_RS11895 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CDO28_RS11895 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal CDO28_RS11895 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11900 IPR001469 ATPase, F1 complex, delta/epsilon subunit CDO28_RS11900 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal CDO28_RS11905 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase CDO28_RS11905 IPR016040 NAD(P)-binding domain CDO28_RS11905 IPR032095 CDO28_RS11905 CDO28_RS11910 IPR000485 AsnC-type HTH domain CDO28_RS11910 IPR011008 Dimeric alpha-beta barrel CDO28_RS11910 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS11910 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS11910 IPR019888 Transcription regulator AsnC-type CDO28_RS11920 IPR001626 ABC-3 CDO28_RS11920 IPR029022 ABC transporter, BtuC-like CDO28_RS11925 IPR001626 ABC-3 CDO28_RS11925 IPR029022 ABC transporter, BtuC-like CDO28_RS11930 IPR003439 ABC transporter-like CDO28_RS11930 IPR003593 AAA+ ATPase domain CDO28_RS11930 IPR017871 ABC transporter, conserved site CDO28_RS11930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11935 IPR006127 Periplasmic solute binding protein family CDO28_RS11935 IPR006128 Adhesion lipoprotein CDO28_RS11935 IPR006129 Adhesin B CDO28_RS11940 IPR002481 Ferric-uptake regulator CDO28_RS11940 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS11945 IPR000620 Drug/metabolite transporter CDO28_RS11950 IPR006042 Xanthine/uracil permease CDO28_RS11950 IPR006043 Xanthine/uracil/vitamin C permease CDO28_RS11955 IPR006042 Xanthine/uracil permease CDO28_RS11955 IPR006043 Xanthine/uracil/vitamin C permease CDO28_RS11955 IPR017588 Xanthine permease CDO28_RS11960 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS11960 IPR014597 ABC transporter, periplasmic substrate-binding protein CDO28_RS11965 IPR018678 Protein of unknown function DUF2160, transmembrane CDO28_RS11970 IPR000515 MetI-like domain CDO28_RS11975 IPR000515 MetI-like domain CDO28_RS11980 IPR003439 ABC transporter-like CDO28_RS11980 IPR003593 AAA+ ATPase domain CDO28_RS11980 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS11980 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11985 IPR003439 ABC transporter-like CDO28_RS11985 IPR003593 AAA+ ATPase domain CDO28_RS11985 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS11985 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS11985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS11990 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CDO28_RS11990 IPR006076 FAD dependent oxidoreductase CDO28_RS11990 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS11990 IPR031656 CDO28_RS11990 CDO28_RS11995 IPR001034 HTH DeoR N-terminal domain CDO28_RS11995 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS11995 IPR014036 DeoR C-terminal sensor domain CDO28_RS12000 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS12000 IPR016040 NAD(P)-binding domain CDO28_RS12000 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS12005 IPR000847 Transcription regulator HTH, LysR CDO28_RS12005 IPR005119 LysR, substrate-binding CDO28_RS12005 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12010 IPR002023 NADH-quinone oxidoreductase subunit E-like CDO28_RS12010 IPR012336 Thioredoxin-like fold CDO28_RS12015 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CDO28_RS12015 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CDO28_RS12015 IPR012336 Thioredoxin-like fold CDO28_RS12015 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding CDO28_RS12025 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS12025 IPR006478 Formate dehydrogenase, alpha subunit CDO28_RS12025 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CDO28_RS12025 IPR006656 Molybdopterin oxidoreductase CDO28_RS12025 IPR006657 Molydopterin dinucleotide-binding domain CDO28_RS12025 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDO28_RS12025 IPR009010 Aspartate decarboxylase-like domain CDO28_RS12025 IPR012675 Beta-grasp domain CDO28_RS12025 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS12025 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS12025 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CDO28_RS12030 IPR003786 Protein FdhD CDO28_RS12030 IPR016193 Cytidine deaminase-like CDO28_RS12035 IPR021074 Formate dehydrogenase, delta subunit CDO28_RS12040 IPR000014 PAS domain CDO28_RS12040 IPR001610 PAC motif CDO28_RS12040 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDO28_RS12040 IPR013655 PAS fold-3 CDO28_RS12045 IPR002545 CheW-like protein CDO28_RS12050 IPR006035 Ureohydrolase CDO28_RS12050 IPR014033 Arginase CDO28_RS12050 IPR020855 Ureohydrolase, manganese-binding site CDO28_RS12050 IPR023696 Ureohydrolase domain CDO28_RS12055 IPR000485 AsnC-type HTH domain CDO28_RS12055 IPR011008 Dimeric alpha-beta barrel CDO28_RS12055 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12055 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS12055 IPR019888 Transcription regulator AsnC-type CDO28_RS12060 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS12060 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS12065 IPR002575 Aminoglycoside phosphotransferase CDO28_RS12065 IPR011009 Protein kinase-like domain CDO28_RS12065 IPR024165 Aminoglycoside 3-phosphotransferase CDO28_RS12075 IPR007452 Protein of unknown function DUF490 CDO28_RS12080 IPR000184 Bacterial surface antigen (D15) CDO28_RS12080 IPR010827 Surface antigen variable number CDO28_RS12085 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS12085 IPR000639 Epoxide hydrolase-like CDO28_RS12085 IPR029058 Alpha/Beta hydrolase fold CDO28_RS12090 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS12090 IPR007195 TolB, N-terminal CDO28_RS12090 IPR011990 Tetratricopeptide-like helical domain CDO28_RS12090 IPR029787 Nucleotide cyclase CDO28_RS12100 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS12100 IPR002888 [2Fe-2S]-binding CDO28_RS12100 IPR012675 Beta-grasp domain CDO28_RS12105 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS12105 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS12110 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDO28_RS12110 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDO28_RS12110 IPR016166 FAD-binding, type 2 CDO28_RS12110 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS12110 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS12115 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CDO28_RS12115 IPR004839 Aminotransferase, class I/classII CDO28_RS12115 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase CDO28_RS12115 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS12115 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS12115 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS12120 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CDO28_RS12120 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CDO28_RS12120 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CDO28_RS12120 IPR016040 NAD(P)-binding domain CDO28_RS12120 IPR026877 DXP reductoisomerase C-terminal domain CDO28_RS12125 IPR005184 Domain of unknown function DUF306, Meta/HslJ CDO28_RS12125 IPR018660 C-type lysozyme, inhibitor CDO28_RS12130 IPR000182 GNAT domain CDO28_RS12130 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS12140 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS12140 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS12140 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS12150 IPR000600 ROK CDO28_RS12155 IPR005624 Domain of unknown function DUF336 CDO28_RS12155 IPR010371 Uncharacterised protein family UPF0303 CDO28_RS12160 IPR008928 Six-hairpin glycosidase-like CDO28_RS12160 IPR012341 Six-hairpin glycosidase CDO28_RS12165 IPR000489 Pterin-binding CDO28_RS12165 IPR003726 Homocysteine S-methyltransferase CDO28_RS12165 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CDO28_RS12165 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CDO28_RS12165 IPR006158 Cobalamin (vitamin B12)-binding domain CDO28_RS12165 IPR011005 Dihydropteroate synthase-like CDO28_RS12165 IPR011822 Cobalamin-dependent methionine synthase CDO28_RS12170 IPR001207 Transposase, mutator type CDO28_RS12175 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CDO28_RS12175 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CDO28_RS12175 IPR012132 Glucose-methanol-choline oxidoreductase CDO28_RS12175 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS12180 IPR001851 ABC transporter, permease CDO28_RS12185 IPR001851 ABC transporter, permease CDO28_RS12190 IPR003439 ABC transporter-like CDO28_RS12190 IPR003593 AAA+ ATPase domain CDO28_RS12190 IPR017871 ABC transporter, conserved site CDO28_RS12190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS12195 IPR003439 ABC transporter-like CDO28_RS12195 IPR003593 AAA+ ATPase domain CDO28_RS12195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS12195 IPR032823 CDO28_RS12195 CDO28_RS12200 IPR028081 Leucine-binding protein domain CDO28_RS12200 IPR028082 Periplasmic binding protein-like I CDO28_RS12205 IPR000847 Transcription regulator HTH, LysR CDO28_RS12205 IPR005119 LysR, substrate-binding CDO28_RS12205 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12245 IPR007324 Sugar-binding domain, putative CDO28_RS12245 IPR007630 RNA polymerase sigma-70 region 4 CDO28_RS12245 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12245 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS12250 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS12250 IPR030678 CDO28_RS12250 CDO28_RS12255 IPR003439 ABC transporter-like CDO28_RS12255 IPR003593 AAA+ ATPase domain CDO28_RS12255 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS12255 IPR017871 ABC transporter, conserved site CDO28_RS12255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS12260 IPR003439 ABC transporter-like CDO28_RS12260 IPR003593 AAA+ ATPase domain CDO28_RS12260 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS12260 IPR017871 ABC transporter, conserved site CDO28_RS12260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS12265 IPR000515 MetI-like domain CDO28_RS12270 IPR000515 MetI-like domain CDO28_RS12275 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CDO28_RS12275 IPR030395 CDO28_RS12275 CDO28_RS12280 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS12285 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS12290 IPR006076 FAD dependent oxidoreductase CDO28_RS12290 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS12295 IPR000515 MetI-like domain CDO28_RS12295 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS12300 IPR000620 Drug/metabolite transporter CDO28_RS12305 IPR003439 ABC transporter-like CDO28_RS12305 IPR003593 AAA+ ATPase domain CDO28_RS12305 IPR017871 ABC transporter, conserved site CDO28_RS12305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS12305 IPR030679 CDO28_RS12305 CDO28_RS12310 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDO28_RS12315 IPR002716 PIN domain CDO28_RS12315 IPR029060 PIN domain-like CDO28_RS12320 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CDO28_RS12320 IPR011611 Carbohydrate kinase PfkB CDO28_RS12320 IPR029056 Ribokinase-like CDO28_RS12325 IPR001347 Sugar isomerase (SIS) CDO28_RS12325 IPR024713 Fructosamine deglycase FrlB CDO28_RS12330 IPR000524 Transcription regulator HTH, GntR CDO28_RS12330 IPR011663 UbiC transcription regulator-associated CDO28_RS12330 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12330 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CDO28_RS12340 IPR000160 GGDEF domain CDO28_RS12340 IPR001633 EAL domain CDO28_RS12340 IPR029787 Nucleotide cyclase CDO28_RS12350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS12355 IPR011990 Tetratricopeptide-like helical domain CDO28_RS12365 IPR003997 RTX secretion protein D, Gram-negative bacteria CDO28_RS12365 IPR010129 Type I secretion membrane fusion protein, HlyD CDO28_RS12370 IPR003439 ABC transporter-like CDO28_RS12370 IPR003593 AAA+ ATPase domain CDO28_RS12370 IPR010128 ATPase, type I secretion system, PrtD CDO28_RS12370 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS12370 IPR017871 ABC transporter, conserved site CDO28_RS12370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS12385 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS12385 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12385 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS12390 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS12390 IPR005956 4-hydroxyphenylpyruvate dioxygenase CDO28_RS12390 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS12395 IPR000485 AsnC-type HTH domain CDO28_RS12395 IPR011008 Dimeric alpha-beta barrel CDO28_RS12395 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12395 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS12395 IPR019888 Transcription regulator AsnC-type CDO28_RS12400 IPR000835 MarR-type HTH domain CDO28_RS12400 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12405 IPR005708 Homogentisate 1,2-dioxygenase CDO28_RS12405 IPR011051 RmlC-like cupin domain CDO28_RS12405 IPR014710 RmlC-like jelly roll fold CDO28_RS12405 IPR022950 Homogentisate 1,2-dioxygenase, bacterial CDO28_RS12410 IPR011234 Fumarylacetoacetase, C-terminal-related CDO28_RS12415 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS12415 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS12415 IPR005955 Maleylacetoacetate isomerase CDO28_RS12415 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS12415 IPR012336 Thioredoxin-like fold CDO28_RS12420 IPR002376 Formyl transferase, N-terminal CDO28_RS12420 IPR004810 Formyltetrahydrofolate deformylase CDO28_RS12425 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS12425 IPR006258 Dihydrolipoamide dehydrogenase CDO28_RS12425 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDO28_RS12425 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS12425 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS12430 IPR000089 Biotin/lipoyl attachment CDO28_RS12430 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CDO28_RS12430 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDO28_RS12430 IPR004167 E3 binding CDO28_RS12430 IPR011053 Single hybrid motif CDO28_RS12430 IPR023213 Chloramphenicol acetyltransferase-like domain CDO28_RS12435 IPR005475 Transketolase-like, pyrimidine-binding domain CDO28_RS12435 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CDO28_RS12435 IPR029061 Thiamin diphosphate-binding fold CDO28_RS12435 IPR033248 CDO28_RS12435 CDO28_RS12440 IPR001017 Dehydrogenase, E1 component CDO28_RS12440 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain CDO28_RS12440 IPR029061 Thiamin diphosphate-binding fold CDO28_RS12445 IPR006076 FAD dependent oxidoreductase CDO28_RS12445 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS12450 IPR000847 Transcription regulator HTH, LysR CDO28_RS12450 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12455 IPR003439 ABC transporter-like CDO28_RS12455 IPR003593 AAA+ ATPase domain CDO28_RS12455 IPR005116 Transport-associated OB, type 1 CDO28_RS12455 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS12455 IPR011868 Molybdate ABC transporter, ATP-binding protein CDO28_RS12455 IPR017871 ABC transporter, conserved site CDO28_RS12455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS12460 IPR000515 MetI-like domain CDO28_RS12460 IPR011867 Molybdate ABC transporter, permease protein CDO28_RS12470 IPR005950 Molybdenum ABC transporter, periplasmic binding protein CDO28_RS12475 IPR002043 Uracil-DNA glycosylase CDO28_RS12475 IPR005122 Uracil-DNA glycosylase-like CDO28_RS12475 IPR018085 Uracil-DNA glycosylase, active site CDO28_RS12480 IPR000878 Tetrapyrrole methylase CDO28_RS12480 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase CDO28_RS12480 IPR014776 Tetrapyrrole methylase, subdomain 2 CDO28_RS12480 IPR014777 Tetrapyrrole methylase, subdomain 1 CDO28_RS12485 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CDO28_RS12485 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like CDO28_RS12490 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase CDO28_RS12495 IPR000878 Tetrapyrrole methylase CDO28_RS12495 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CDO28_RS12495 IPR006364 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core CDO28_RS12495 IPR012382 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase CDO28_RS12495 IPR014777 Tetrapyrrole methylase, subdomain 1 CDO28_RS12500 IPR000878 Tetrapyrrole methylase CDO28_RS12500 IPR006363 Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core CDO28_RS12500 IPR014776 Tetrapyrrole methylase, subdomain 2 CDO28_RS12500 IPR014777 Tetrapyrrole methylase, subdomain 1 CDO28_RS12505 IPR003723 Precorrin-6x reductase CDO28_RS12510 IPR000878 Tetrapyrrole methylase CDO28_RS12510 IPR006365 Cobalamin (vitamin B12) biosynthesis CobL/Precorrin-6Y C(5,15)-methyltransferase CDO28_RS12510 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase CDO28_RS12510 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit CDO28_RS12510 IPR014776 Tetrapyrrole methylase, subdomain 2 CDO28_RS12510 IPR014777 Tetrapyrrole methylase, subdomain 1 CDO28_RS12510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS12515 IPR000878 Tetrapyrrole methylase CDO28_RS12515 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CDO28_RS12515 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase CDO28_RS12515 IPR014776 Tetrapyrrole methylase, subdomain 2 CDO28_RS12515 IPR014777 Tetrapyrrole methylase, subdomain 1 CDO28_RS12520 IPR000847 Transcription regulator HTH, LysR CDO28_RS12520 IPR005119 LysR, substrate-binding CDO28_RS12520 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12525 IPR003680 Flavodoxin-like fold CDO28_RS12525 IPR029039 Flavoprotein-like CDO28_RS12530 IPR005133 Na+/H+ antiporter subunit G CDO28_RS12535 IPR007208 Na(+)/H(+) antiporter subunit F-like CDO28_RS12540 IPR002758 Na+/H+ antiporter subunit E CDO28_RS12540 IPR004847 Na(+)/H(+) antiporter subunit E1 CDO28_RS12545 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CDO28_RS12545 IPR004775 Na(+)/H(+) antiporter subunit D1 CDO28_RS12550 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CDO28_RS12550 IPR006673 Mnh complex subunit C1 CDO28_RS12555 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal CDO28_RS12555 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CDO28_RS12555 IPR005281 Monovalent cation:proton antiporter, subunit B CDO28_RS12555 IPR005663 Monovalent cation proton antiporter subunit A CDO28_RS12555 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CDO28_RS12555 IPR025383 Domain of unknown function DUF4040 CDO28_RS12560 IPR000014 PAS domain CDO28_RS12560 IPR000160 GGDEF domain CDO28_RS12560 IPR001633 EAL domain CDO28_RS12560 IPR006189 CHASE CDO28_RS12560 IPR013655 PAS fold-3 CDO28_RS12560 IPR029787 Nucleotide cyclase CDO28_RS12565 IPR012308 DNA ligase, ATP-dependent, N-terminal CDO28_RS12565 IPR012309 DNA ligase, ATP-dependent, C-terminal CDO28_RS12565 IPR012310 DNA ligase, ATP-dependent, central CDO28_RS12565 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS12565 IPR016059 DNA ligase, ATP-dependent, conserved site CDO28_RS12565 IPR026333 ATP-dependent DNA ligase, PP_1105 family CDO28_RS12570 IPR001279 Beta-lactamase-like CDO28_RS12570 IPR026360 Putative exonuclease, DNA ligase-associated CDO28_RS12575 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CDO28_RS12585 IPR002313 Lysine-tRNA ligase, class II CDO28_RS12585 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CDO28_RS12585 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CDO28_RS12585 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS12585 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CDO28_RS12590 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CDO28_RS12590 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDO28_RS12590 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CDO28_RS12590 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CDO28_RS12590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS12590 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CDO28_RS12590 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain CDO28_RS12590 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CDO28_RS12595 IPR005496 Integral membrane protein TerC CDO28_RS12600 IPR009057 Homeodomain-like CDO28_RS12600 IPR010499 Bacterial transcription activator, effector binding CDO28_RS12600 IPR011256 Regulatory factor, effector binding domain CDO28_RS12600 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS12600 IPR018062 HTH domain AraC-type, conserved site CDO28_RS12600 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS12600 IPR029442 GyrI-like small molecule binding domain CDO28_RS12605 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS12605 IPR009057 Homeodomain-like CDO28_RS12605 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS12605 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDO28_RS12610 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS12610 IPR032317 CDO28_RS12610 CDO28_RS12615 IPR004638 Drug resistance transporter EmrB/QacA subfamily CDO28_RS12615 IPR011701 Major facilitator superfamily CDO28_RS12615 IPR020846 Major facilitator superfamily domain CDO28_RS12620 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS12620 IPR029052 Metallo-dependent phosphatase-like CDO28_RS12625 IPR000843 Transcription regulator HTH, LacI CDO28_RS12625 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS12625 IPR025997 Periplasmic binding protein domain CDO28_RS12625 IPR028082 Periplasmic binding protein-like I CDO28_RS12630 IPR000577 CDO28_RS12630 CDO28_RS12630 IPR006000 Xylulokinase CDO28_RS12630 IPR018483 Carbohydrate kinase, FGGY, conserved site CDO28_RS12630 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS12630 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDO28_RS12635 IPR001998 Xylose isomerase CDO28_RS12635 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS12635 IPR013452 Xylose isomerase, bacterial-type CDO28_RS12640 IPR011418 AP endonuclease, family 2, C-terminal CDO28_RS12640 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS12645 IPR000683 Oxidoreductase, N-terminal CDO28_RS12645 IPR004104 Oxidoreductase, C-terminal CDO28_RS12645 IPR016040 NAD(P)-binding domain CDO28_RS12650 IPR001360 Glycoside hydrolase, family 1 CDO28_RS12650 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS12650 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase CDO28_RS12650 IPR017853 Glycoside hydrolase, superfamily CDO28_RS12650 IPR018120 Glycoside hydrolase, family 1, active site CDO28_RS12650 IPR033132 CDO28_RS12650 CDO28_RS12655 IPR003439 ABC transporter-like CDO28_RS12655 IPR003593 AAA+ ATPase domain CDO28_RS12655 IPR017871 ABC transporter, conserved site CDO28_RS12655 IPR018449 NIL domain CDO28_RS12655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS12660 IPR000515 MetI-like domain CDO28_RS12665 IPR004872 Lipoprotein NlpA family CDO28_RS12670 IPR001763 Rhodanese-like domain CDO28_RS12670 IPR011031 Multihaem cytochrome CDO28_RS12670 IPR020936 Uncharacterised protein family UPF0176 CDO28_RS12675 IPR007899 CHAD CDO28_RS12680 IPR012042 Uncharacterised conserved protein UCP016487, CYTH-type CDO28_RS12680 IPR023577 CYTH-like domain CDO28_RS12680 IPR033469 CDO28_RS12680 CDO28_RS12685 IPR000887 KDPG/KHG aldolase CDO28_RS12685 IPR013785 Aldolase-type TIM barrel CDO28_RS12685 IPR031337 CDO28_RS12685 CDO28_RS12685 IPR031338 CDO28_RS12685 CDO28_RS12695 IPR007486 Protein of unknown function DUF533 CDO28_RS12695 IPR029024 TerB-like CDO28_RS12700 IPR000182 GNAT domain CDO28_RS12700 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS12710 IPR011660 Rv0623-like transcription factor CDO28_RS12715 IPR002716 PIN domain CDO28_RS12715 IPR022907 VapC family CDO28_RS12715 IPR029060 PIN domain-like CDO28_RS12720 IPR011541 Nickel/cobalt transporter, high-affinity CDO28_RS12725 IPR010412 Protein of unknown function DUF1007 CDO28_RS12725 IPR016537 Uncharacterised conserved protein UCP008159, CDO28_RS12730 IPR000847 Transcription regulator HTH, LysR CDO28_RS12730 IPR005119 LysR, substrate-binding CDO28_RS12730 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12735 IPR000183 Ornithine/DAP/Arg decarboxylase CDO28_RS12735 IPR002433 Ornithine decarboxylase CDO28_RS12735 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDO28_RS12735 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CDO28_RS12735 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CDO28_RS12735 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CDO28_RS12735 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CDO28_RS12735 IPR029066 PLP-binding barrel CDO28_RS12740 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS12745 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS12755 IPR001680 WD40 repeat CDO28_RS12755 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS12755 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CDO28_RS12755 IPR015943 WD40/YVTN repeat-like-containing domain CDO28_RS12755 IPR024977 Anaphase-promoting complex subunit 4, WD40 domain CDO28_RS12760 IPR003495 CobW/HypB/UreG domain CDO28_RS12760 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDO28_RS12760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS12765 IPR003785 Creatininase/formamide hydrolase CDO28_RS12765 IPR024087 Creatininase-like domain CDO28_RS12770 IPR000835 MarR-type HTH domain CDO28_RS12770 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12775 IPR000843 Transcription regulator HTH, LacI CDO28_RS12775 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS12775 IPR028082 Periplasmic binding protein-like I CDO28_RS12780 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDO28_RS12780 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS12780 IPR016040 NAD(P)-binding domain CDO28_RS12785 IPR011697 Peptidase C26 CDO28_RS12785 IPR029062 Class I glutamine amidotransferase-like CDO28_RS12790 IPR000014 PAS domain CDO28_RS12790 IPR000160 GGDEF domain CDO28_RS12790 IPR001633 EAL domain CDO28_RS12790 IPR029787 Nucleotide cyclase CDO28_RS12795 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type CDO28_RS12800 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CDO28_RS12800 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CDO28_RS12800 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CDO28_RS12800 IPR016040 NAD(P)-binding domain CDO28_RS12805 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal CDO28_RS12810 IPR012136 NADP transhydrogenase, beta subunit CDO28_RS12810 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS12815 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS12815 IPR029787 Nucleotide cyclase CDO28_RS12820 IPR009333 Protein of unknown function DUF992 CDO28_RS12825 IPR001440 Tetratricopeptide TPR1 CDO28_RS12825 IPR011990 Tetratricopeptide-like helical domain CDO28_RS12825 IPR013105 Tetratricopeptide TPR2 CDO28_RS12825 IPR019734 Tetratricopeptide repeat CDO28_RS12830 IPR001911 Ribosomal protein S21 CDO28_RS12830 IPR018278 Ribosomal protein S21, conserved site CDO28_RS12840 IPR006076 FAD dependent oxidoreductase CDO28_RS12840 IPR006278 Sarcosine oxidase, beta subunit, heterotetrameric CDO28_RS12840 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS12845 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric CDO28_RS12850 IPR006222 Glycine cleavage T-protein, N-terminal CDO28_RS12850 IPR006277 Sarcosine oxidase, alpha subunit CDO28_RS12850 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDO28_RS12850 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS12850 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDO28_RS12850 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CDO28_RS12855 IPR006280 Sarcosine oxidase, gamma subunit, heterotetrameric CDO28_RS12855 IPR007375 Sarcosine oxidase, gamma subunit CDO28_RS12860 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS12860 IPR011032 GroES (chaperonin 10)-like CDO28_RS12860 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS12860 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS12860 IPR016040 NAD(P)-binding domain CDO28_RS12860 IPR020843 Polyketide synthase, enoylreductase CDO28_RS12865 IPR011200 Uncharacterised conserved protein UCP012608 CDO28_RS12870 IPR002539 MaoC-like domain CDO28_RS12870 IPR029069 HotDog domain CDO28_RS12875 IPR004193 Glycoside hydrolase, family 13, N-terminal CDO28_RS12875 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CDO28_RS12875 IPR011837 Glycogen debranching enzyme, GlgX type CDO28_RS12875 IPR013780 Glycosyl hydrolase, family 13, all-beta CDO28_RS12875 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS12875 IPR013783 Immunoglobulin-like fold CDO28_RS12875 IPR014756 Immunoglobulin E-set CDO28_RS12875 IPR017853 Glycoside hydrolase, superfamily CDO28_RS12880 IPR005841 Alpha-D-phosphohexomutase superfamily CDO28_RS12880 IPR005843 Alpha-D-phosphohexomutase, C-terminal CDO28_RS12880 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CDO28_RS12880 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CDO28_RS12880 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CDO28_RS12880 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CDO28_RS12880 IPR016066 Alpha-D-phosphohexomutase, conserved site CDO28_RS12885 IPR001296 Glycosyl transferase, family 1 CDO28_RS12885 IPR011835 Glycogen/starch synthase, ADP-glucose type CDO28_RS12885 IPR013534 Starch synthase, catalytic domain CDO28_RS12890 IPR005835 Nucleotidyl transferase CDO28_RS12890 IPR005836 ADP-glucose pyrophosphorylase, conserved site CDO28_RS12890 IPR011004 Trimeric LpxA-like CDO28_RS12890 IPR011831 Glucose-1-phosphate adenylyltransferase CDO28_RS12890 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial CDO28_RS12890 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS12895 IPR004193 Glycoside hydrolase, family 13, N-terminal CDO28_RS12895 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CDO28_RS12895 IPR006048 Alpha-amylase, C-terminal all beta CDO28_RS12895 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB CDO28_RS12895 IPR013780 Glycosyl hydrolase, family 13, all-beta CDO28_RS12895 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS12895 IPR013783 Immunoglobulin-like fold CDO28_RS12895 IPR014756 Immunoglobulin E-set CDO28_RS12895 IPR017853 Glycoside hydrolase, superfamily CDO28_RS12900 IPR000811 Glycosyl transferase, family 35 CDO28_RS12900 IPR011833 Glycogen/starch/alpha-glucan phosphorylase CDO28_RS12905 IPR002035 von Willebrand factor, type A CDO28_RS12905 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal CDO28_RS12910 IPR002931 Transglutaminase-like CDO28_RS12910 IPR013589 Bacterial transglutaminase-like, N-terminal CDO28_RS12915 IPR007296 Domain of unknown function DUF403 CDO28_RS12915 IPR025841 Circularly permuted ATP-grasp type 2 CDO28_RS12920 IPR020471 Aldo/keto reductase subgroup CDO28_RS12920 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS12925 IPR000847 Transcription regulator HTH, LysR CDO28_RS12925 IPR005119 LysR, substrate-binding CDO28_RS12925 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12930 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS12930 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS12935 IPR011473 Protein of unknown function DUF1579 CDO28_RS12940 IPR000835 MarR-type HTH domain CDO28_RS12940 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12945 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS12945 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS12945 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS12945 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS12945 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS12945 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS12955 IPR000572 Oxidoreductase, molybdopterin-binding domain CDO28_RS12955 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation CDO28_RS12955 IPR008335 Eukaryotic molybdopterin oxidoreductase CDO28_RS12955 IPR014756 Immunoglobulin E-set CDO28_RS12960 IPR009056 Cytochrome c-like domain CDO28_RS12965 IPR000923 Blue (type 1) copper domain CDO28_RS12965 IPR001235 Blue (type 1) copper protein, plastocyanin-type CDO28_RS12965 IPR002386 Amicyanin/Pseudoazurin CDO28_RS12965 IPR008972 Cupredoxin CDO28_RS12965 IPR012745 Pseudoazurin CDO28_RS12965 IPR028871 Blue (type 1) copper protein, binding site CDO28_RS12975 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS12975 IPR011057 Mss4-like CDO28_RS12980 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CDO28_RS12980 IPR004404 Dihydroxy-acid dehydratase CDO28_RS12980 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDO28_RS12980 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CDO28_RS12990 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS12990 IPR011006 CheY-like superfamily CDO28_RS12995 IPR002508 Cell wall hydrolase/autolysin, catalytic CDO28_RS12995 IPR007709 N-formylglutamate amidohydrolase CDO28_RS13000 IPR000760 Inositol monophosphatase CDO28_RS13000 IPR011809 Histidinol-phosphate phosphatase, putative, inositol monophosphatase CDO28_RS13000 IPR020583 Inositol monophosphatase, metal-binding site CDO28_RS13005 IPR022742 Putative lysophospholipase CDO28_RS13005 IPR029058 Alpha/Beta hydrolase fold CDO28_RS13010 IPR002068 Alpha crystallin/Hsp20 domain CDO28_RS13010 IPR008978 HSP20-like chaperone CDO28_RS13015 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS13015 IPR030678 CDO28_RS13015 CDO28_RS13020 IPR003439 ABC transporter-like CDO28_RS13020 IPR003593 AAA+ ATPase domain CDO28_RS13020 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS13020 IPR017871 ABC transporter, conserved site CDO28_RS13020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS13025 IPR000515 MetI-like domain CDO28_RS13025 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDO28_RS13030 IPR000515 MetI-like domain CDO28_RS13035 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS13035 IPR002410 Peptidase S33 CDO28_RS13035 IPR005945 Proline-specific peptidase CDO28_RS13035 IPR029058 Alpha/Beta hydrolase fold CDO28_RS13040 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS13040 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CDO28_RS13040 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS13040 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS13045 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS13045 IPR002410 Peptidase S33 CDO28_RS13045 IPR005945 Proline-specific peptidase CDO28_RS13045 IPR029058 Alpha/Beta hydrolase fold CDO28_RS13050 IPR016833 Putative sodium bile acid cotransporter CDO28_RS13055 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CDO28_RS13055 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS13055 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS13055 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS13055 IPR026273 Low specificity L-threonine aldolase CDO28_RS13060 IPR002489 Glutamate synthase, alpha subunit, C-terminal CDO28_RS13060 IPR002932 Glutamate synthase domain CDO28_RS13060 IPR006982 Glutamate synthase, central-N CDO28_RS13060 IPR013785 Aldolase-type TIM barrel CDO28_RS13060 IPR017932 Glutamine amidotransferase type 2 domain CDO28_RS13060 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS13065 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 CDO28_RS13065 IPR009051 Alpha-helical ferredoxin CDO28_RS13065 IPR016040 NAD(P)-binding domain CDO28_RS13065 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS13065 IPR028261 Dihydroprymidine dehydrogenase domain II CDO28_RS13070 IPR007407 Protein of unknown function DUF459 CDO28_RS13070 IPR013830 CDO28_RS13070 CDO28_RS13075 IPR002477 Peptidoglycan binding-like CDO28_RS13075 IPR011970 Lytic murein transglycosylase CDO28_RS13075 IPR023346 Lysozyme-like domain CDO28_RS13075 IPR031304 CDO28_RS13075 CDO28_RS13080 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CDO28_RS13080 IPR005835 Nucleotidyl transferase CDO28_RS13080 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS13085 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CDO28_RS13085 IPR018759 Protein of unknown function DUF2320 CDO28_RS13090 IPR002810 NfeD-like, C-terminal domain CDO28_RS13090 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS13095 IPR001107 Band 7 protein CDO28_RS13095 IPR001972 Stomatin family CDO28_RS13100 IPR001015 Ferrochelatase CDO28_RS13100 IPR019772 Ferrochelatase, active site CDO28_RS13105 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS13105 IPR006146 5'-Nucleotidase, conserved site CDO28_RS13105 IPR006179 5'-Nucleotidase/apyrase CDO28_RS13105 IPR008334 5'-Nucleotidase, C-terminal CDO28_RS13105 IPR018392 LysM domain CDO28_RS13105 IPR029052 Metallo-dependent phosphatase-like CDO28_RS13115 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase CDO28_RS13115 IPR016040 NAD(P)-binding domain CDO28_RS13115 IPR023181 Homospermidine synthase-like, domain CDO28_RS13115 IPR032095 CDO28_RS13115 CDO28_RS13120 IPR000160 GGDEF domain CDO28_RS13120 IPR029787 Nucleotide cyclase CDO28_RS13125 IPR001544 Aminotransferase, class IV CDO28_RS13130 IPR005801 ADC synthase CDO28_RS13130 IPR005802 Para-aminobenzoate synthase, component I CDO28_RS13130 IPR015890 Chorismate binding, C-terminal CDO28_RS13130 IPR019999 Anthranilate synthase component I - like CDO28_RS13135 IPR001567 Peptidase M3A/M3B CDO28_RS13135 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 CDO28_RS13135 IPR013647 Oligopeptidase F, N-terminal domain CDO28_RS13135 IPR024079 Metallopeptidase, catalytic domain CDO28_RS13140 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS13140 IPR002078 RNA polymerase sigma factor 54 interaction domain CDO28_RS13140 IPR002197 DNA binding HTH domain, Fis-type CDO28_RS13140 IPR003593 AAA+ ATPase domain CDO28_RS13140 IPR009057 Homeodomain-like CDO28_RS13140 IPR011006 CheY-like superfamily CDO28_RS13140 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDO28_RS13140 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDO28_RS13140 IPR025944 Sigma-54 interaction domain, conserved site CDO28_RS13140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS13145 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CDO28_RS13145 IPR010275 Protein of unknown function DUF882 CDO28_RS13150 IPR018753 Azospirillum phage Cd, Gp10 CDO28_RS13155 IPR023163 SMc04008-like domain CDO28_RS13160 IPR002508 Cell wall hydrolase/autolysin, catalytic CDO28_RS13160 IPR007709 N-formylglutamate amidohydrolase CDO28_RS13160 IPR011227 Uncharacterised conserved protein UCP029730 CDO28_RS13165 IPR009380 Protein of unknown function DUF1036 CDO28_RS13170 IPR001697 Pyruvate kinase CDO28_RS13170 IPR011037 Pyruvate kinase-like, insert domain CDO28_RS13170 IPR015793 Pyruvate kinase, barrel CDO28_RS13170 IPR015794 Pyruvate kinase, alpha/beta CDO28_RS13170 IPR015795 Pyruvate kinase, C-terminal CDO28_RS13170 IPR015806 Pyruvate kinase, beta-barrel insert domain CDO28_RS13170 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS13170 IPR018209 Pyruvate kinase, active site CDO28_RS13175 IPR011990 Tetratricopeptide-like helical domain CDO28_RS13175 IPR019734 Tetratricopeptide repeat CDO28_RS13180 IPR000473 Ribosomal protein L36 CDO28_RS13185 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CDO28_RS13185 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CDO28_RS13185 IPR011054 Rudiment single hybrid motif CDO28_RS13185 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS13185 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS13185 IPR016185 Pre-ATP-grasp domain CDO28_RS13190 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain CDO28_RS13190 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE CDO28_RS13195 IPR007420 Protein of unknown function DUF465 CDO28_RS13200 IPR007420 Protein of unknown function DUF465 CDO28_RS13205 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS13205 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS13210 IPR002781 Transmembrane protein TauE like CDO28_RS13215 IPR003733 Thiamine phosphate synthase CDO28_RS13215 IPR013785 Aldolase-type TIM barrel CDO28_RS13215 IPR022998 Thiamin phosphate synthase superfamily CDO28_RS13220 IPR006597 Sel1-like CDO28_RS13220 IPR011990 Tetratricopeptide-like helical domain CDO28_RS13225 IPR000760 Inositol monophosphatase CDO28_RS13225 IPR020550 Inositol monophosphatase, conserved site CDO28_RS13225 IPR020583 Inositol monophosphatase, metal-binding site CDO28_RS13225 IPR022337 Inositol monophosphatase, SuhB CDO28_RS13230 IPR002898 MotA/TolQ/ExbB proton channel CDO28_RS13235 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CDO28_RS13240 IPR003439 ABC transporter-like CDO28_RS13240 IPR003593 AAA+ ATPase domain CDO28_RS13240 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS13240 IPR011918 ABC transporter, ATP-binding/permease protein CDO28_RS13240 IPR017871 ABC transporter, conserved site CDO28_RS13240 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS13245 IPR002150 Ribosomal protein L31 CDO28_RS13245 IPR027491 Ribosomal protein L31 type A CDO28_RS13250 IPR010848 Protein of unknown function DUF1465 CDO28_RS13255 IPR009579 Protein of unknown function DUF1192 CDO28_RS13260 IPR011701 Major facilitator superfamily CDO28_RS13260 IPR020846 Major facilitator superfamily domain CDO28_RS13270 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS13270 IPR007195 TolB, N-terminal CDO28_RS13270 IPR011990 Tetratricopeptide-like helical domain CDO28_RS13270 IPR019734 Tetratricopeptide repeat CDO28_RS13270 IPR029787 Nucleotide cyclase CDO28_RS13275 IPR003719 Phenazine biosynthesis PhzF protein CDO28_RS13280 IPR000741 Fructose-bisphosphate aldolase, class-I CDO28_RS13280 IPR013785 Aldolase-type TIM barrel CDO28_RS13280 IPR029768 Fructose-bisphosphate aldolase class-I active site CDO28_RS13285 IPR001576 Phosphoglycerate kinase CDO28_RS13285 IPR015824 Phosphoglycerate kinase, N-terminal CDO28_RS13285 IPR015901 Phosphoglycerate kinase, C-terminal CDO28_RS13285 IPR015911 Phosphoglycerate kinase, conserved site CDO28_RS13290 IPR009467 Putative glycolipid-binding protein CDO28_RS13295 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CDO28_RS13295 IPR016040 NAD(P)-binding domain CDO28_RS13295 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CDO28_RS13295 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CDO28_RS13295 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CDO28_RS13295 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CDO28_RS13300 IPR005474 Transketolase, N-terminal CDO28_RS13300 IPR005475 Transketolase-like, pyrimidine-binding domain CDO28_RS13300 IPR005478 Transketolase, bacterial-like CDO28_RS13300 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CDO28_RS13300 IPR020826 Transketolase binding site CDO28_RS13300 IPR029061 Thiamin diphosphate-binding fold CDO28_RS13300 IPR033248 CDO28_RS13300 CDO28_RS13305 IPR025310 Protein of unknown function DUF4164 CDO28_RS13310 IPR007838 Cell division protein ZapA-like CDO28_RS13330 IPR002698 5-formyltetrahydrofolate cyclo-ligase CDO28_RS13330 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CDO28_RS13335 IPR005235 Metallophosphoesterase, MG_246/BB_0505 CDO28_RS13335 IPR029052 Metallo-dependent phosphatase-like CDO28_RS13340 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS13340 IPR032317 CDO28_RS13340 CDO28_RS13345 IPR001036 Acriflavin resistance protein CDO28_RS13345 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CDO28_RS13345 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDO28_RS13350 IPR001279 Beta-lactamase-like CDO28_RS13355 IPR002876 Transcriptional regulator TACO1-like CDO28_RS13355 IPR017856 Integrase, N-terminal zinc-binding domain-like CDO28_RS13355 IPR026563 Transcriptional regulator TACO1-like, domain 2 CDO28_RS13355 IPR026564 Transcriptional regulator TACO1-like, domain 3 CDO28_RS13355 IPR029072 YebC-like CDO28_RS13360 IPR011251 Luciferase-like domain CDO28_RS13360 IPR019949 Luciferase family oxidoreductase, group 1 CDO28_RS13365 IPR002176 Crossover junction endodeoxyribonuclease RuvC CDO28_RS13365 IPR012337 Ribonuclease H-like domain CDO28_RS13365 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site CDO28_RS13370 IPR000085 Bacterial DNA recombination protein RuvA CDO28_RS13370 IPR010994 RuvA domain 2-like CDO28_RS13370 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal CDO28_RS13370 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS13370 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CDO28_RS13375 IPR000641 CbxX/CfqX CDO28_RS13375 IPR003593 AAA+ ATPase domain CDO28_RS13375 IPR004605 DNA helicase, Holliday junction RuvB type CDO28_RS13375 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal CDO28_RS13375 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal CDO28_RS13375 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS13375 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS13380 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS13380 IPR029052 Metallo-dependent phosphatase-like CDO28_RS13385 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS13385 IPR016040 NAD(P)-binding domain CDO28_RS13390 IPR002495 Glycosyl transferase, family 8 CDO28_RS13390 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS13395 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS13395 IPR016040 NAD(P)-binding domain CDO28_RS13400 IPR006683 Thioesterase superfamily CDO28_RS13400 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CDO28_RS13400 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site CDO28_RS13400 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase CDO28_RS13400 IPR029069 HotDog domain CDO28_RS13405 IPR012309 DNA ligase, ATP-dependent, C-terminal CDO28_RS13405 IPR012310 DNA ligase, ATP-dependent, central CDO28_RS13405 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS13405 IPR014143 DNA ligase D CDO28_RS13405 IPR014144 DNA ligase D, 3'-phosphoesterase domain CDO28_RS13405 IPR014145 DNA polymerase LigD, polymerase domain CDO28_RS13405 IPR014146 DNA polymerase LigD, ligase domain CDO28_RS13410 IPR002898 MotA/TolQ/ExbB proton channel CDO28_RS13410 IPR014163 Tol-Pal system, TolQ CDO28_RS13415 IPR003400 Biopolymer transport protein ExbD/TolR CDO28_RS13415 IPR014168 Biopolymer transport, TolR CDO28_RS13425 IPR007195 TolB, N-terminal CDO28_RS13425 IPR011659 WD40-like Beta Propeller CDO28_RS13425 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB CDO28_RS13425 IPR015943 WD40/YVTN repeat-like-containing domain CDO28_RS13430 IPR006664 Outer membrane protein, bacterial CDO28_RS13430 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CDO28_RS13430 IPR006690 Outer membrane protein, OmpA-like, conserved site CDO28_RS13430 IPR014169 Peptidoglycan-associated lipoprotein CDO28_RS13435 IPR011990 Tetratricopeptide-like helical domain CDO28_RS13435 IPR014162 Tol-Pal system, YbgF CDO28_RS13435 IPR019734 Tetratricopeptide repeat CDO28_RS13440 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CDO28_RS13440 IPR012094 Lysidine-tRNA(Ile) synthetase CDO28_RS13440 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal CDO28_RS13440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS13445 IPR000642 Peptidase M41 CDO28_RS13445 IPR003593 AAA+ ATPase domain CDO28_RS13445 IPR003959 ATPase, AAA-type, core CDO28_RS13445 IPR003960 ATPase, AAA-type, conserved site CDO28_RS13445 IPR005936 Peptidase, FtsH CDO28_RS13445 IPR011546 Peptidase M41, FtsH extracellular CDO28_RS13445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS13450 IPR005841 Alpha-D-phosphohexomutase superfamily CDO28_RS13450 IPR005843 Alpha-D-phosphohexomutase, C-terminal CDO28_RS13450 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CDO28_RS13450 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CDO28_RS13450 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CDO28_RS13450 IPR006352 Phosphoglucosamine mutase CDO28_RS13450 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CDO28_RS13455 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CDO28_RS13455 IPR027385 Outer membrane protein beta-barrel CDO28_RS13460 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CDO28_RS13460 IPR027385 Outer membrane protein beta-barrel CDO28_RS13465 IPR000192 Aminotransferase class V domain CDO28_RS13465 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type CDO28_RS13465 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS13465 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS13465 IPR022278 Phosphoserine aminotransferase CDO28_RS13470 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDO28_RS13470 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS13470 IPR006236 D-3-phosphoglycerate dehydrogenase CDO28_RS13470 IPR016040 NAD(P)-binding domain CDO28_RS13470 IPR029009 Allosteric substrate binding domain CDO28_RS13470 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDO28_RS13470 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDO28_RS13475 IPR000620 Drug/metabolite transporter CDO28_RS13480 IPR001114 Adenylosuccinate synthetase CDO28_RS13480 IPR018220 Adenylosuccinate synthase, active site CDO28_RS13480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS13480 IPR033128 CDO28_RS13480 CDO28_RS13490 IPR000943 RNA polymerase sigma-70 CDO28_RS13490 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS13490 IPR007630 RNA polymerase sigma-70 region 4 CDO28_RS13490 IPR009042 RNA polymerase sigma-70 region 1.2 CDO28_RS13490 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS13490 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria CDO28_RS13490 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS13490 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS13490 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS13490 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE CDO28_RS13495 IPR002942 RNA-binding S4 domain CDO28_RS13495 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CDO28_RS13495 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CDO28_RS13495 IPR006225 Pseudouridine synthase, RluC/RluD CDO28_RS13495 IPR020103 Pseudouridine synthase, catalytic domain CDO28_RS13505 IPR001537 tRNA/rRNA methyltransferase, SpoU type CDO28_RS13505 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CDO28_RS13505 IPR029028 Alpha/beta knot methyltransferases CDO28_RS13505 IPR029064 50S ribosomal protein L30e-like CDO28_RS13515 IPR008325 Uncharacterised conserved protein UCP033924 CDO28_RS13520 IPR018762 Protein of unknown function DUF2328 CDO28_RS13525 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS13525 IPR011006 CheY-like superfamily CDO28_RS13530 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS13530 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS13530 IPR011006 CheY-like superfamily CDO28_RS13530 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS13540 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS13540 IPR031165 CDO28_RS13540 CDO28_RS13545 IPR009534 Protein of unknown function DUF1153 CDO28_RS13545 IPR010921 Trp repressor/replication initiator CDO28_RS13545 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS13550 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS13550 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CDO28_RS13550 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS13550 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS13555 IPR004506 tRNA-specific 2-thiouridylase CDO28_RS13555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS13555 IPR023382 Adenine nucleotide alpha hydrolase-like domains CDO28_RS13605 IPR010282 Uncharacterised protein family HutD/Ves CDO28_RS13605 IPR011051 RmlC-like cupin domain CDO28_RS13605 IPR014710 RmlC-like jelly roll fold CDO28_RS13610 IPR011642 Nucleoside recognition Gate CDO28_RS13615 IPR001106 Aromatic amino acid lyase CDO28_RS13615 IPR008948 L-Aspartase-like CDO28_RS13615 IPR024083 Fumarase/histidase, N-terminal CDO28_RS13620 IPR003439 ABC transporter-like CDO28_RS13620 IPR003593 AAA+ ATPase domain CDO28_RS13620 IPR005892 Glycine betaine transport ATP-binding subunit CDO28_RS13620 IPR017871 ABC transporter, conserved site CDO28_RS13620 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS13625 IPR000515 MetI-like domain CDO28_RS13630 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CDO28_RS13635 IPR006680 Amidohydrolase 1 CDO28_RS13635 IPR010252 Formiminoglutamate deiminase CDO28_RS13635 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS13635 IPR032466 CDO28_RS13635 CDO28_RS13640 IPR000524 Transcription regulator HTH, GntR CDO28_RS13640 IPR010248 Histidine utilization repressor CDO28_RS13640 IPR011663 UbiC transcription regulator-associated CDO28_RS13640 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS13640 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CDO28_RS13645 IPR002575 Aminoglycoside phosphotransferase CDO28_RS13645 IPR005814 Aminotransferase class-III CDO28_RS13645 IPR011009 Protein kinase-like domain CDO28_RS13645 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS13645 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS13645 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS13650 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS13655 IPR002575 Aminoglycoside phosphotransferase CDO28_RS13655 IPR005814 Aminotransferase class-III CDO28_RS13655 IPR011009 Protein kinase-like domain CDO28_RS13655 IPR011055 Duplicated hybrid motif CDO28_RS13655 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS13655 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS13655 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS13655 IPR016047 Peptidase M23 CDO28_RS13660 IPR000485 AsnC-type HTH domain CDO28_RS13660 IPR011008 Dimeric alpha-beta barrel CDO28_RS13660 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS13660 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS13660 IPR019888 Transcription regulator AsnC-type CDO28_RS13665 IPR009057 Homeodomain-like CDO28_RS13665 IPR009594 Transcription regulator HTH, AraC, N-terminal CDO28_RS13665 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS13670 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS13670 IPR011032 GroES (chaperonin 10)-like CDO28_RS13670 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS13670 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS13670 IPR016040 NAD(P)-binding domain CDO28_RS13670 IPR020843 Polyketide synthase, enoylreductase CDO28_RS13675 IPR000485 AsnC-type HTH domain CDO28_RS13675 IPR011008 Dimeric alpha-beta barrel CDO28_RS13675 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS13675 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDO28_RS13675 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS13675 IPR019888 Transcription regulator AsnC-type CDO28_RS13680 IPR002933 Peptidase M20 CDO28_RS13680 IPR011650 Peptidase M20, dimerisation domain CDO28_RS13680 IPR017439 Amidohydrolase CDO28_RS13685 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CDO28_RS13685 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS13685 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CDO28_RS13690 IPR003495 CobW/HypB/UreG domain CDO28_RS13690 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDO28_RS13690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS13695 IPR007159 AbrB-like domain CDO28_RS13700 IPR002716 PIN domain CDO28_RS13700 IPR022907 VapC family CDO28_RS13700 IPR029060 PIN domain-like CDO28_RS13705 IPR001455 TusA-like domain CDO28_RS13715 IPR001095 Acetyl-CoA carboxylase, alpha subunit CDO28_RS13715 IPR029045 ClpP/crotonase-like domain CDO28_RS13720 IPR002104 Integrase, catalytic CDO28_RS13720 IPR004107 Integrase, SAM-like, N-terminal CDO28_RS13720 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS13720 IPR011932 Tyrosine recombinase XerD CDO28_RS13720 IPR013762 Integrase-like, catalytic core CDO28_RS13720 IPR023009 Tyrosine recombinase XerC/XerD CDO28_RS13720 IPR023109 Integrase/recombinase, N-terminal CDO28_RS13730 IPR010985 Ribbon-helix-helix CDO28_RS13730 IPR013321 Arc-type ribbon-helix-helix CDO28_RS13730 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor CDO28_RS13735 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CDO28_RS13740 IPR000623 Shikimate kinase/Threonine synthase-like 1 CDO28_RS13740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS13740 IPR031322 CDO28_RS13740 CDO28_RS13745 IPR016037 3-dehydroquinate synthase AroB CDO28_RS13745 IPR030960 CDO28_RS13745 CDO28_RS13745 IPR030963 CDO28_RS13745 CDO28_RS13750 IPR000644 CBS domain CDO28_RS13750 IPR002550 Domain of unknown function DUF21 CDO28_RS13750 IPR005170 Transporter-associated domain CDO28_RS13750 IPR016166 FAD-binding, type 2 CDO28_RS13750 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS13755 IPR002634 BolA protein CDO28_RS13760 IPR001623 DnaJ domain CDO28_RS13765 IPR006537 Cobaltochelatase subunit CobS CDO28_RS13765 IPR011704 ATPase, dynein-related, AAA domain CDO28_RS13765 IPR013615 CbbQ/NirQ/NorQ, C-terminal CDO28_RS13765 IPR025865 Cobaltochelatase subunit CobS N-terminal domain CDO28_RS13765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS13770 IPR002035 von Willebrand factor, type A CDO28_RS13770 IPR006538 Cobalt chelatase, CobT subunit CDO28_RS13770 IPR025861 Cobalamin biosynthesis protein CobT VWA domain CDO28_RS13775 IPR014567 Uncharacterised conserved protein UCP031900 CDO28_RS13775 IPR027372 Phytase-like domain CDO28_RS13780 IPR003744 Protein of unknown function DUF165 CDO28_RS13785 IPR001383 Ribosomal protein L28 CDO28_RS13785 IPR026569 Ribosomal protein L28/L24 CDO28_RS13790 IPR021457 Protein of unknown function DUF3108 CDO28_RS13795 IPR000620 Drug/metabolite transporter CDO28_RS13800 IPR009327 Protein of unknown function DUF985 CDO28_RS13800 IPR011051 RmlC-like cupin domain CDO28_RS13800 IPR014710 RmlC-like jelly roll fold CDO28_RS13805 IPR001279 Beta-lactamase-like CDO28_RS13805 IPR017782 Hydroxyacylglutathione hydrolase CDO28_RS13805 IPR032282 CDO28_RS13805 CDO28_RS13810 IPR013216 Methyltransferase type 11 CDO28_RS13810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS13815 IPR004839 Aminotransferase, class I/classII CDO28_RS13815 IPR005861 Histidinol-phosphate aminotransferase family CDO28_RS13815 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS13815 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS13815 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS13820 IPR003099 Prephenate dehydrogenase CDO28_RS13820 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS13820 IPR016040 NAD(P)-binding domain CDO28_RS13825 IPR018666 Protein of unknown function DUF2125 CDO28_RS13830 IPR006840 ChaC-like protein CDO28_RS13830 IPR013024 Butirosin biosynthesis, BtrG-like CDO28_RS13835 IPR002123 Phospholipid/glycerol acyltransferase CDO28_RS13840 IPR003848 Domain of unknown function DUF218 CDO28_RS13840 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS13850 IPR003439 ABC transporter-like CDO28_RS13850 IPR003593 AAA+ ATPase domain CDO28_RS13850 IPR005286 Cell division protein FtsE, ATP-binding CDO28_RS13850 IPR017871 ABC transporter, conserved site CDO28_RS13850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS13860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS13865 IPR000836 Phosphoribosyltransferase domain CDO28_RS13865 IPR005904 Hypoxanthine phosphoribosyl transferase CDO28_RS13865 IPR029057 Phosphoribosyltransferase-like CDO28_RS13870 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS13870 IPR011006 CheY-like superfamily CDO28_RS13880 IPR012683 Conserved hypothetical protein CHP02302, transmembrane CDO28_RS13885 IPR000183 Ornithine/DAP/Arg decarboxylase CDO28_RS13885 IPR002986 Diaminopimelate decarboxylase, LysA CDO28_RS13885 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDO28_RS13885 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CDO28_RS13885 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CDO28_RS13885 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CDO28_RS13885 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CDO28_RS13885 IPR029066 PLP-binding barrel CDO28_RS13890 IPR032831 CDO28_RS13890 CDO28_RS13895 IPR000362 Fumarate lyase family CDO28_RS13895 IPR008948 L-Aspartase-like CDO28_RS13895 IPR009049 Argininosuccinate lyase CDO28_RS13895 IPR020557 Fumarate lyase, conserved site CDO28_RS13895 IPR022761 Fumarate lyase, N-terminal CDO28_RS13895 IPR024083 Fumarase/histidase, N-terminal CDO28_RS13895 IPR029419 Argininosuccinate lyase, C-terminal CDO28_RS13900 IPR012336 Thioredoxin-like fold CDO28_RS13900 IPR013740 Redoxin CDO28_RS13900 IPR017937 Thioredoxin, conserved site CDO28_RS13905 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDO28_RS13905 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDO28_RS13905 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CDO28_RS13905 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS13905 IPR013328 Dehydrogenase, multihelical CDO28_RS13905 IPR016040 NAD(P)-binding domain CDO28_RS13905 IPR022694 3-hydroxyacyl-CoA dehydrogenase CDO28_RS13910 IPR001308 Electron transfer flavoprotein, alpha subunit CDO28_RS13910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS13910 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDO28_RS13910 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CDO28_RS13910 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site CDO28_RS13910 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS13915 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CDO28_RS13915 IPR012255 Electron transfer flavoprotein, beta subunit CDO28_RS13915 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS13915 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDO28_RS13920 IPR022764 Peptidase S54, rhomboid domain CDO28_RS13925 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like CDO28_RS13925 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type CDO28_RS13930 IPR007667 Hypoxia induced protein, domain CDO28_RS13935 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS13935 IPR016040 NAD(P)-binding domain CDO28_RS13935 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS13940 IPR017039 Virulence factor BrkB CDO28_RS13945 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CDO28_RS13945 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CDO28_RS13945 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS13945 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CDO28_RS13950 IPR003265 HhH-GPD domain CDO28_RS13950 IPR011257 DNA glycosylase CDO28_RS13950 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CDO28_RS13955 IPR003615 HNH nuclease CDO28_RS13955 IPR029471 HNH endonuclease 5 CDO28_RS13960 IPR003752 Disulphide bond formation protein DsbB/BdbC CDO28_RS13960 IPR023380 Disulphide bond formation protein DsbB-like domain CDO28_RS13960 IPR024199 Uncharacterised conserved protein, DsbB-like CDO28_RS13970 IPR000182 GNAT domain CDO28_RS13970 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS13975 IPR010985 Ribbon-helix-helix CDO28_RS13975 IPR014795 Vibrio phage ICP1, Orf50 CDO28_RS13980 IPR000873 AMP-dependent synthetase/ligase CDO28_RS13980 IPR020845 AMP-binding, conserved site CDO28_RS13980 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS13985 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS13990 IPR002797 Polysaccharide biosynthesis protein CDO28_RS13990 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CDO28_RS13995 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CDO28_RS13995 IPR011701 Major facilitator superfamily CDO28_RS13995 IPR020846 Major facilitator superfamily domain CDO28_RS14000 IPR000185 Protein translocase subunit SecA CDO28_RS14000 IPR004027 SEC-C motif CDO28_RS14000 IPR011115 SecA DEAD-like, N-terminal CDO28_RS14000 IPR011116 SecA Wing/Scaffold CDO28_RS14000 IPR011130 SecA preprotein, cross-linking domain CDO28_RS14000 IPR020937 SecA conserved site CDO28_RS14000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14005 IPR027304 Trigger factor/SurA domain CDO28_RS14010 IPR002813 Arginine biosynthesis protein ArgJ CDO28_RS14010 IPR016117 ArgJ-like domain CDO28_RS14015 IPR000182 GNAT domain CDO28_RS14015 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS14020 IPR000086 NUDIX hydrolase domain CDO28_RS14020 IPR003561 Mutator MutT CDO28_RS14020 IPR015797 NUDIX hydrolase domain-like CDO28_RS14020 IPR020084 NUDIX hydrolase, conserved site CDO28_RS14020 IPR020476 NUDIX hydrolase CDO28_RS14030 IPR007047 Flp/Fap pilin component CDO28_RS14035 IPR013216 Methyltransferase type 11 CDO28_RS14035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS14040 IPR000836 Phosphoribosyltransferase domain CDO28_RS14040 IPR029057 Phosphoribosyltransferase-like CDO28_RS14045 IPR002109 Glutaredoxin CDO28_RS14045 IPR011900 Glutaredoxin, GrxC CDO28_RS14045 IPR012336 Thioredoxin-like fold CDO28_RS14045 IPR014025 Glutaredoxin subgroup CDO28_RS14050 IPR001110 Uncharacterised protein family UPF0012, conserved site CDO28_RS14050 IPR003010 Carbon-nitrogen hydrolase CDO28_RS14055 IPR009562 Protein of unknown function DUF1178 CDO28_RS14060 IPR010233 Ubiquinone biosynthesis O-methyltransferase CDO28_RS14060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS14065 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CDO28_RS14065 IPR024072 Dihydrofolate reductase-like domain CDO28_RS14070 IPR001048 Aspartate/glutamate/uridylate kinase CDO28_RS14070 IPR001341 Aspartate kinase domain CDO28_RS14070 IPR002912 ACT domain CDO28_RS14070 IPR005260 Aspartate kinase, monofunctional class CDO28_RS14070 IPR018042 Aspartate kinase, conserved site CDO28_RS14070 IPR027795 GATS-like ACT domain CDO28_RS14075 IPR000121 PEP-utilising enzyme, C-terminal CDO28_RS14075 IPR003018 GAF domain CDO28_RS14075 IPR006318 Phosphoenolpyruvate-utilising enzyme CDO28_RS14075 IPR008279 PEP-utilising enzyme, mobile domain CDO28_RS14075 IPR008731 Phosphotransferase system, enzyme I N-terminal CDO28_RS14075 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS14075 IPR023151 PEP-utilising enzyme, conserved site CDO28_RS14075 IPR029016 GAF domain-like CDO28_RS14080 IPR000352 Peptide chain release factor class I/class II CDO28_RS14080 IPR004373 Peptide chain release factor 1 CDO28_RS14080 IPR005139 Peptide chain release factor CDO28_RS14080 IPR014720 Double-stranded RNA-binding domain CDO28_RS14085 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDO28_RS14085 IPR004556 Modification methylase HemK CDO28_RS14085 IPR007848 Methyltransferase small domain CDO28_RS14085 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CDO28_RS14085 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS14095 IPR025430 Domain of unknown function DUF4167 CDO28_RS14100 IPR001270 ClpA/B family CDO28_RS14100 IPR003593 AAA+ ATPase domain CDO28_RS14100 IPR003959 ATPase, AAA-type, core CDO28_RS14100 IPR004176 Clp, N-terminal CDO28_RS14100 IPR017730 Chaperonin ClpB CDO28_RS14100 IPR018368 ClpA/B, conserved site 1 CDO28_RS14100 IPR019489 Clp ATPase, C-terminal CDO28_RS14100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14100 IPR028299 ClpA/B, conserved site 2 CDO28_RS14105 IPR011055 Duplicated hybrid motif CDO28_RS14105 IPR016047 Peptidase M23 CDO28_RS14145 IPR001279 Beta-lactamase-like CDO28_RS14150 IPR000847 Transcription regulator HTH, LysR CDO28_RS14150 IPR005119 LysR, substrate-binding CDO28_RS14150 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14155 IPR005805 Rieske iron-sulphur protein, C-terminal CDO28_RS14155 IPR006076 FAD dependent oxidoreductase CDO28_RS14155 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS14155 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS14160 IPR001920 Asp/Glu racemase CDO28_RS14160 IPR015942 Asp/Glu/hydantoin racemase CDO28_RS14165 IPR002563 Flavin reductase-like, FMN-binding CDO28_RS14165 IPR012349 FMN-binding split barrel CDO28_RS14170 IPR000524 Transcription regulator HTH, GntR CDO28_RS14170 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS14170 IPR011711 GntR, C-terminal CDO28_RS14170 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14175 IPR003439 ABC transporter-like CDO28_RS14175 IPR003593 AAA+ ATPase domain CDO28_RS14175 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS14175 IPR017871 ABC transporter, conserved site CDO28_RS14175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14180 IPR003439 ABC transporter-like CDO28_RS14180 IPR003593 AAA+ ATPase domain CDO28_RS14180 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS14180 IPR017871 ABC transporter, conserved site CDO28_RS14180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14185 IPR006680 Amidohydrolase 1 CDO28_RS14185 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS14185 IPR032466 CDO28_RS14185 CDO28_RS14190 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS14190 IPR013108 Amidohydrolase 3 CDO28_RS14190 IPR018228 Deoxyribonuclease, TatD-related, conserved site CDO28_RS14190 IPR032466 CDO28_RS14190 CDO28_RS14195 IPR000515 MetI-like domain CDO28_RS14195 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDO28_RS14200 IPR000515 MetI-like domain CDO28_RS14205 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS14205 IPR030678 CDO28_RS14205 CDO28_RS14215 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS14215 IPR030678 CDO28_RS14215 CDO28_RS14220 IPR006680 Amidohydrolase 1 CDO28_RS14220 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS14220 IPR032466 CDO28_RS14220 CDO28_RS14225 IPR005814 Aminotransferase class-III CDO28_RS14225 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS14225 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS14225 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS14230 IPR000868 Isochorismatase-like CDO28_RS14235 IPR001851 ABC transporter, permease CDO28_RS14240 IPR001851 ABC transporter, permease CDO28_RS14245 IPR003439 ABC transporter-like CDO28_RS14245 IPR003593 AAA+ ATPase domain CDO28_RS14245 IPR017871 ABC transporter, conserved site CDO28_RS14245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14250 IPR003439 ABC transporter-like CDO28_RS14250 IPR003593 AAA+ ATPase domain CDO28_RS14250 IPR017871 ABC transporter, conserved site CDO28_RS14250 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14250 IPR032823 CDO28_RS14250 CDO28_RS14255 IPR028081 Leucine-binding protein domain CDO28_RS14255 IPR028082 Periplasmic binding protein-like I CDO28_RS14260 IPR000868 Isochorismatase-like CDO28_RS14265 IPR002508 Cell wall hydrolase/autolysin, catalytic CDO28_RS14265 IPR007709 N-formylglutamate amidohydrolase CDO28_RS14265 IPR011227 Uncharacterised conserved protein UCP029730 CDO28_RS14270 IPR000281 Helix-turn-helix protein RpiR CDO28_RS14270 IPR001347 Sugar isomerase (SIS) CDO28_RS14270 IPR009057 Homeodomain-like CDO28_RS14270 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14275 IPR008146 Glutamine synthetase, catalytic domain CDO28_RS14275 IPR008147 Glutamine synthetase, beta-Grasp CDO28_RS14275 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDO28_RS14280 IPR009050 Globin-like CDO28_RS14280 IPR012292 Globin, structural domain CDO28_RS14290 IPR003953 FAD binding domain CDO28_RS14290 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CDO28_RS14290 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS14295 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS14295 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS14300 IPR003439 ABC transporter-like CDO28_RS14300 IPR003593 AAA+ ATPase domain CDO28_RS14300 IPR017871 ABC transporter, conserved site CDO28_RS14300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14305 IPR000515 MetI-like domain CDO28_RS14310 IPR010067 ABC transporter, substrate-binding protein, aliphatic sulphonates CDO28_RS14310 IPR015168 SsuA/THI5-like CDO28_RS14315 IPR011701 Major facilitator superfamily CDO28_RS14315 IPR020846 Major facilitator superfamily domain CDO28_RS14320 IPR005474 Transketolase, N-terminal CDO28_RS14320 IPR005475 Transketolase-like, pyrimidine-binding domain CDO28_RS14320 IPR005478 Transketolase, bacterial-like CDO28_RS14320 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CDO28_RS14320 IPR029061 Thiamin diphosphate-binding fold CDO28_RS14325 IPR000577 CDO28_RS14325 CDO28_RS14325 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS14325 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDO28_RS14330 IPR000524 Transcription regulator HTH, GntR CDO28_RS14330 IPR011663 UbiC transcription regulator-associated CDO28_RS14330 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14330 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CDO28_RS14335 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS14335 IPR016040 NAD(P)-binding domain CDO28_RS14335 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS14340 IPR025997 Periplasmic binding protein domain CDO28_RS14340 IPR028082 Periplasmic binding protein-like I CDO28_RS14345 IPR003439 ABC transporter-like CDO28_RS14345 IPR003593 AAA+ ATPase domain CDO28_RS14345 IPR017871 ABC transporter, conserved site CDO28_RS14345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14350 IPR001851 ABC transporter, permease CDO28_RS14355 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS14355 IPR016040 NAD(P)-binding domain CDO28_RS14355 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS14360 IPR000577 CDO28_RS14360 CDO28_RS14360 IPR018483 Carbohydrate kinase, FGGY, conserved site CDO28_RS14360 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS14360 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDO28_RS14365 IPR000577 CDO28_RS14365 CDO28_RS14365 IPR018483 Carbohydrate kinase, FGGY, conserved site CDO28_RS14365 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS14365 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDO28_RS14370 IPR002915 DeoC/FbaB/ lacD aldolase CDO28_RS14370 IPR011343 Deoxyribose-phosphate aldolase CDO28_RS14370 IPR013785 Aldolase-type TIM barrel CDO28_RS14370 IPR028581 Deoxyribose-phosphate aldolase type I CDO28_RS14375 IPR000281 Helix-turn-helix protein RpiR CDO28_RS14375 IPR001347 Sugar isomerase (SIS) CDO28_RS14375 IPR009057 Homeodomain-like CDO28_RS14375 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14380 IPR001279 Beta-lactamase-like CDO28_RS14385 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDO28_RS14385 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS14385 IPR016040 NAD(P)-binding domain CDO28_RS14385 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDO28_RS14390 IPR016040 NAD(P)-binding domain CDO28_RS14395 IPR000887 KDPG/KHG aldolase CDO28_RS14395 IPR013785 Aldolase-type TIM barrel CDO28_RS14395 IPR031337 CDO28_RS14395 CDO28_RS14400 IPR010551 Glucose-6-phosphate isomerase, prokaryote CDO28_RS14400 IPR011051 RmlC-like cupin domain CDO28_RS14400 IPR014710 RmlC-like jelly roll fold CDO28_RS14400 IPR016758 Glucose-6-phosphate isomerase, subgroup CDO28_RS14405 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS14405 IPR016040 NAD(P)-binding domain CDO28_RS14405 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS14410 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS14410 IPR016040 NAD(P)-binding domain CDO28_RS14410 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS14415 IPR001670 Alcohol dehydrogenase, iron-type CDO28_RS14415 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CDO28_RS14420 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS14420 IPR016040 NAD(P)-binding domain CDO28_RS14420 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS14425 IPR000524 Transcription regulator HTH, GntR CDO28_RS14425 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS14425 IPR011711 GntR, C-terminal CDO28_RS14425 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14430 IPR003767 Malate/L-lactate dehydrogenase CDO28_RS14435 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS14435 IPR016040 NAD(P)-binding domain CDO28_RS14435 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS14445 IPR025997 Periplasmic binding protein domain CDO28_RS14445 IPR028082 Periplasmic binding protein-like I CDO28_RS14450 IPR003439 ABC transporter-like CDO28_RS14450 IPR003593 AAA+ ATPase domain CDO28_RS14450 IPR017871 ABC transporter, conserved site CDO28_RS14450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14460 IPR001851 ABC transporter, permease CDO28_RS14465 IPR000847 Transcription regulator HTH, LysR CDO28_RS14465 IPR005119 LysR, substrate-binding CDO28_RS14465 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14470 IPR000515 MetI-like domain CDO28_RS14475 IPR000515 MetI-like domain CDO28_RS14480 IPR003439 ABC transporter-like CDO28_RS14480 IPR003593 AAA+ ATPase domain CDO28_RS14480 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS14480 IPR017871 ABC transporter, conserved site CDO28_RS14480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14485 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS14490 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS14490 IPR030678 CDO28_RS14490 CDO28_RS14495 IPR002933 Peptidase M20 CDO28_RS14495 IPR011650 Peptidase M20, dimerisation domain CDO28_RS14495 IPR017145 Aminobenzoyl-glutamate utilization protein B CDO28_RS14495 IPR017439 Amidohydrolase CDO28_RS14505 IPR000843 Transcription regulator HTH, LacI CDO28_RS14505 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS14505 IPR025997 Periplasmic binding protein domain CDO28_RS14505 IPR028082 Periplasmic binding protein-like I CDO28_RS14510 IPR025997 Periplasmic binding protein domain CDO28_RS14510 IPR028082 Periplasmic binding protein-like I CDO28_RS14515 IPR003439 ABC transporter-like CDO28_RS14515 IPR003593 AAA+ ATPase domain CDO28_RS14515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14520 IPR001851 ABC transporter, permease CDO28_RS14525 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS14530 IPR006694 Fatty acid hydroxylase CDO28_RS14540 IPR012747 MocE Rieske [2Fe-2S] CDO28_RS14540 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS14545 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS14545 IPR011032 GroES (chaperonin 10)-like CDO28_RS14545 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS14545 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS14545 IPR016040 NAD(P)-binding domain CDO28_RS14545 IPR020843 Polyketide synthase, enoylreductase CDO28_RS14550 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS14550 IPR016040 NAD(P)-binding domain CDO28_RS14555 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS14555 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS14555 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS14555 IPR028202 Reductase, C-terminal CDO28_RS14560 IPR025870 Glyoxalase-like domain CDO28_RS14560 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS14570 IPR006076 FAD dependent oxidoreductase CDO28_RS14570 IPR006222 Glycine cleavage T-protein, N-terminal CDO28_RS14570 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDO28_RS14570 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS14570 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDO28_RS14570 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CDO28_RS14570 IPR032503 CDO28_RS14570 CDO28_RS14575 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CDO28_RS14580 IPR000298 Cytochrome c oxidase subunit III domain CDO28_RS14580 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CDO28_RS14585 IPR000298 Cytochrome c oxidase subunit III domain CDO28_RS14585 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CDO28_RS14590 IPR000883 Cytochrome c oxidase subunit I CDO28_RS14590 IPR014241 Cytochrome c oxidase, subunit I bacterial type CDO28_RS14590 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDO28_RS14590 IPR023616 Cytochrome c oxidase, subunit I domain CDO28_RS14595 IPR001505 Copper centre Cu(A) CDO28_RS14595 IPR002429 Cytochrome c oxidase subunit II C-terminal CDO28_RS14595 IPR008972 Cupredoxin CDO28_RS14595 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CDO28_RS14600 IPR002327 Cytochrome c, class IA/ IB CDO28_RS14600 IPR009056 Cytochrome c-like domain CDO28_RS14605 IPR003439 ABC transporter-like CDO28_RS14605 IPR003593 AAA+ ATPase domain CDO28_RS14605 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS14605 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS14605 IPR013611 Transport-associated OB, type 2 CDO28_RS14605 IPR017871 ABC transporter, conserved site CDO28_RS14605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14610 IPR000515 MetI-like domain CDO28_RS14615 IPR000515 MetI-like domain CDO28_RS14625 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDO28_RS14625 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS14625 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS14625 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS14630 IPR000524 Transcription regulator HTH, GntR CDO28_RS14630 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS14630 IPR011711 GntR, C-terminal CDO28_RS14630 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14635 IPR001207 Transposase, mutator type CDO28_RS14640 IPR000524 Transcription regulator HTH, GntR CDO28_RS14640 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS14640 IPR011711 GntR, C-terminal CDO28_RS14640 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14645 IPR008146 Glutamine synthetase, catalytic domain CDO28_RS14645 IPR008147 Glutamine synthetase, beta-Grasp CDO28_RS14645 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDO28_RS14650 IPR006076 FAD dependent oxidoreductase CDO28_RS14650 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS14660 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS14670 IPR015590 Aldehyde dehydrogenase domain CDO28_RS14670 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS14670 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS14670 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS14670 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS14675 IPR000620 Drug/metabolite transporter CDO28_RS14680 IPR004839 Aminotransferase, class I/classII CDO28_RS14680 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS14680 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS14680 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS14685 IPR000847 Transcription regulator HTH, LysR CDO28_RS14685 IPR005119 LysR, substrate-binding CDO28_RS14685 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14690 IPR005925 Agmatinase-related CDO28_RS14690 IPR006035 Ureohydrolase CDO28_RS14690 IPR020855 Ureohydrolase, manganese-binding site CDO28_RS14690 IPR023696 Ureohydrolase domain CDO28_RS14700 IPR003439 ABC transporter-like CDO28_RS14700 IPR003593 AAA+ ATPase domain CDO28_RS14700 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS14700 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS14700 IPR013611 Transport-associated OB, type 2 CDO28_RS14700 IPR017871 ABC transporter, conserved site CDO28_RS14700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14705 IPR000515 MetI-like domain CDO28_RS14710 IPR000515 MetI-like domain CDO28_RS14715 IPR001110 Uncharacterised protein family UPF0012, conserved site CDO28_RS14715 IPR003010 Carbon-nitrogen hydrolase CDO28_RS14720 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS14720 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS14725 IPR005025 NADPH-dependent FMN reductase-like CDO28_RS14725 IPR029039 Flavoprotein-like CDO28_RS14730 IPR014914 RES CDO28_RS14740 IPR014914 RES CDO28_RS14750 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS14750 IPR029058 Alpha/Beta hydrolase fold CDO28_RS14750 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS14755 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS14755 IPR016040 NAD(P)-binding domain CDO28_RS14760 IPR000595 Cyclic nucleotide-binding domain CDO28_RS14760 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14760 IPR012318 Helix-turn-helix motif, Crp-type CDO28_RS14760 IPR014710 RmlC-like jelly roll fold CDO28_RS14760 IPR018490 Cyclic nucleotide-binding-like CDO28_RS14765 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS14765 IPR011006 CheY-like superfamily CDO28_RS14770 IPR000760 Inositol monophosphatase CDO28_RS14770 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial CDO28_RS14770 IPR020550 Inositol monophosphatase, conserved site CDO28_RS14775 IPR001851 ABC transporter, permease CDO28_RS14780 IPR001851 ABC transporter, permease CDO28_RS14780 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CDO28_RS14785 IPR003439 ABC transporter-like CDO28_RS14785 IPR003593 AAA+ ATPase domain CDO28_RS14785 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14785 IPR032823 CDO28_RS14785 CDO28_RS14790 IPR003439 ABC transporter-like CDO28_RS14790 IPR003593 AAA+ ATPase domain CDO28_RS14790 IPR017871 ABC transporter, conserved site CDO28_RS14790 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14790 IPR030660 CDO28_RS14790 CDO28_RS14800 IPR000709 Leu/Ile/Val-binding protein CDO28_RS14800 IPR028081 Leucine-binding protein domain CDO28_RS14800 IPR028082 Periplasmic binding protein-like I CDO28_RS14805 IPR000835 MarR-type HTH domain CDO28_RS14805 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14810 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS14810 IPR000639 Epoxide hydrolase-like CDO28_RS14810 IPR029058 Alpha/Beta hydrolase fold CDO28_RS14815 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDO28_RS14815 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS14815 IPR016040 NAD(P)-binding domain CDO28_RS14815 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDO28_RS14815 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDO28_RS14820 IPR002669 Urease accessory protein UreD CDO28_RS14825 IPR002026 Urease, gamma/gamma-beta subunit CDO28_RS14825 IPR012010 Urease, gamma subunit CDO28_RS14830 IPR010696 Protein of unknown function DUF1272 CDO28_RS14835 IPR002019 Urease, beta subunit CDO28_RS14840 IPR009739 Protein of unknown function DUF1311 CDO28_RS14850 IPR005848 Urease, alpha subunit CDO28_RS14850 IPR006680 Amidohydrolase 1 CDO28_RS14850 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS14850 IPR011612 Urease alpha-subunit, N-terminal domain CDO28_RS14850 IPR017950 Urease active site CDO28_RS14850 IPR029754 Urease nickel binding site CDO28_RS14850 IPR032466 CDO28_RS14850 CDO28_RS14855 IPR009057 Homeodomain-like CDO28_RS14860 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS14860 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS14865 IPR009387 Toxin HigB CDO28_RS14870 IPR012336 Thioredoxin-like fold CDO28_RS14870 IPR013740 Redoxin CDO28_RS14875 IPR007138 Antibiotic biosynthesis monooxygenase-like domain CDO28_RS14875 IPR011008 Dimeric alpha-beta barrel CDO28_RS14880 IPR004029 UreE urease accessory, N-terminal CDO28_RS14880 IPR007864 Urease accessory protein UreE, C-terminal domain CDO28_RS14880 IPR012406 Urease accessory protein UreE CDO28_RS14885 IPR002639 Urease accessory protein UreF CDO28_RS14890 IPR003495 CobW/HypB/UreG domain CDO28_RS14890 IPR004400 Urease accessory protein UreG CDO28_RS14890 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14895 IPR001036 Acriflavin resistance protein CDO28_RS14895 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDO28_RS14900 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS14900 IPR032317 CDO28_RS14900 CDO28_RS14905 IPR015168 SsuA/THI5-like CDO28_RS14910 IPR000515 MetI-like domain CDO28_RS14915 IPR000515 MetI-like domain CDO28_RS14920 IPR000182 GNAT domain CDO28_RS14920 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS14925 IPR003439 ABC transporter-like CDO28_RS14925 IPR003593 AAA+ ATPase domain CDO28_RS14925 IPR017871 ABC transporter, conserved site CDO28_RS14925 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS14930 IPR011051 RmlC-like cupin domain CDO28_RS14930 IPR013096 Cupin 2, conserved barrel CDO28_RS14930 IPR014710 RmlC-like jelly roll fold CDO28_RS14930 IPR017102 Uncharacterised conserved protein UCP037087 CDO28_RS14935 IPR006680 Amidohydrolase 1 CDO28_RS14935 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS14935 IPR011778 Hydantoinase/dihydropyrimidinase CDO28_RS14935 IPR032466 CDO28_RS14935 CDO28_RS14940 IPR002933 Peptidase M20 CDO28_RS14940 IPR010158 Amidase, hydantoinase/carbamoylase CDO28_RS14940 IPR011650 Peptidase M20, dimerisation domain CDO28_RS14945 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS14945 IPR009057 Homeodomain-like CDO28_RS14945 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS14945 IPR013573 Transcription regulator YcdC, C-terminal CDO28_RS14945 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS14955 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS14955 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS14955 IPR012675 Beta-grasp domain CDO28_RS14955 IPR029787 Nucleotide cyclase CDO28_RS14960 IPR000847 Transcription regulator HTH, LysR CDO28_RS14960 IPR005119 LysR, substrate-binding CDO28_RS14960 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS14965 IPR011032 GroES (chaperonin 10)-like CDO28_RS14965 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS14965 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS14965 IPR016040 NAD(P)-binding domain CDO28_RS14965 IPR020843 Polyketide synthase, enoylreductase CDO28_RS14970 IPR005720 Dihydroorotate dehydrogenase domain CDO28_RS14970 IPR013785 Aldolase-type TIM barrel CDO28_RS14970 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS14975 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CDO28_RS14975 IPR009051 Alpha-helical ferredoxin CDO28_RS14975 IPR016040 NAD(P)-binding domain CDO28_RS14975 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS14975 IPR028261 Dihydroprymidine dehydrogenase domain II CDO28_RS14980 IPR007324 Sugar-binding domain, putative CDO28_RS14980 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS14985 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS14990 IPR000515 MetI-like domain CDO28_RS14995 IPR000515 MetI-like domain CDO28_RS15000 IPR003439 ABC transporter-like CDO28_RS15000 IPR003593 AAA+ ATPase domain CDO28_RS15000 IPR005116 Transport-associated OB, type 1 CDO28_RS15000 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS15000 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS15000 IPR017871 ABC transporter, conserved site CDO28_RS15000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15005 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS15005 IPR016040 NAD(P)-binding domain CDO28_RS15005 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS15010 IPR000669 Mannitol dehydrogenase CDO28_RS15010 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS15010 IPR013118 Mannitol dehydrogenase, C-terminal CDO28_RS15010 IPR013131 Mannitol dehydrogenase, N-terminal CDO28_RS15010 IPR013328 Dehydrogenase, multihelical CDO28_RS15010 IPR016040 NAD(P)-binding domain CDO28_RS15010 IPR023027 Mannitol dehydrogenase, conserved site CDO28_RS15015 IPR006439 HAD hydrolase, subfamily IA CDO28_RS15015 IPR023198 Phosphoglycolate phosphatase, domain 2 CDO28_RS15015 IPR023214 HAD-like domain CDO28_RS15020 IPR000577 CDO28_RS15020 CDO28_RS15020 IPR006003 Carbohydrate kinase, FGGY-related CDO28_RS15020 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS15020 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDO28_RS15025 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS15025 IPR011006 CheY-like superfamily CDO28_RS15025 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15025 IPR014605 Signal transduction response regulator, PhyR-like, C-terminal, alphaproteobacteria CDO28_RS15035 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CDO28_RS15035 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS15035 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15035 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS15035 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS15035 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS15035 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS15040 IPR000014 PAS domain CDO28_RS15040 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS15040 IPR011102 Signal transduction histidine kinase, HWE region CDO28_RS15040 IPR013655 PAS fold-3 CDO28_RS15040 IPR029016 GAF domain-like CDO28_RS15050 IPR010279 Protein of unknown function DUF883, ElaB CDO28_RS15055 IPR003439 ABC transporter-like CDO28_RS15055 IPR003593 AAA+ ATPase domain CDO28_RS15055 IPR017871 ABC transporter, conserved site CDO28_RS15055 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15060 IPR000522 ABC transporter, permease protein CDO28_RS15060 IPR029022 ABC transporter, BtuC-like CDO28_RS15065 IPR002491 ABC transporter periplasmic binding domain CDO28_RS15070 IPR007845 Haemin-degrading HemS/ChuX domain CDO28_RS15075 IPR019600 Hemin uptake protein HemP CDO28_RS15085 IPR006260 TonB, C-terminal CDO28_RS15090 IPR016772 Uncharacterised conserved protein UCP020408 CDO28_RS15100 IPR007138 Antibiotic biosynthesis monooxygenase-like domain CDO28_RS15100 IPR011008 Dimeric alpha-beta barrel CDO28_RS15105 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDO28_RS15110 IPR006696 Protein of unknown function DUF423 CDO28_RS15115 IPR001486 Globin, truncated bacterial-like CDO28_RS15115 IPR009050 Globin-like CDO28_RS15115 IPR012292 Globin, structural domain CDO28_RS15120 IPR002716 PIN domain CDO28_RS15120 IPR022907 VapC family CDO28_RS15120 IPR029060 PIN domain-like CDO28_RS15125 IPR007159 AbrB-like domain CDO28_RS15130 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS15130 IPR009057 Homeodomain-like CDO28_RS15130 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS15130 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS15135 IPR000390 Small multidrug resistance protein family CDO28_RS15140 IPR008257 Renal dipeptidase family CDO28_RS15140 IPR032466 CDO28_RS15140 CDO28_RS15145 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS15145 IPR030678 CDO28_RS15145 CDO28_RS15150 IPR000515 MetI-like domain CDO28_RS15155 IPR000515 MetI-like domain CDO28_RS15155 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDO28_RS15160 IPR003439 ABC transporter-like CDO28_RS15160 IPR003593 AAA+ ATPase domain CDO28_RS15160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15165 IPR003439 ABC transporter-like CDO28_RS15165 IPR003593 AAA+ ATPase domain CDO28_RS15165 IPR017871 ABC transporter, conserved site CDO28_RS15165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15170 IPR011611 Carbohydrate kinase PfkB CDO28_RS15170 IPR029056 Ribokinase-like CDO28_RS15175 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CDO28_RS15175 IPR013780 Glycosyl hydrolase, family 13, all-beta CDO28_RS15175 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS15175 IPR017853 Glycoside hydrolase, superfamily CDO28_RS15175 IPR032091 CDO28_RS15175 CDO28_RS15180 IPR006679 Adenine deaminase CDO28_RS15180 IPR006680 Amidohydrolase 1 CDO28_RS15180 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS15180 IPR026912 Adenine deaminase C-terminal domain CDO28_RS15180 IPR032466 CDO28_RS15180 CDO28_RS15185 IPR005814 Aminotransferase class-III CDO28_RS15185 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS15185 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS15185 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS15190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15195 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS15195 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15200 IPR012349 FMN-binding split barrel CDO28_RS15200 IPR019595 Domain of unknown function DUF2470 CDO28_RS15205 IPR003439 ABC transporter-like CDO28_RS15205 IPR003593 AAA+ ATPase domain CDO28_RS15205 IPR017871 ABC transporter, conserved site CDO28_RS15205 IPR022473 ABC transporter, Choline, ATP-binding subunit CDO28_RS15205 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15210 IPR000515 MetI-like domain CDO28_RS15210 IPR017784 ABC transporter, choline, permease protein CDO28_RS15215 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CDO28_RS15215 IPR017783 ABC transporter, choline, substrate-binding protein CDO28_RS15220 IPR001267 Thymidine kinase CDO28_RS15220 IPR020633 Thymidine kinase, conserved site CDO28_RS15220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15235 IPR003959 ATPase, AAA-type, core CDO28_RS15235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15240 IPR007569 Domain of unknown function DUF559 CDO28_RS15240 IPR011335 Restriction endonuclease type II-like CDO28_RS15245 IPR002559 Transposase, IS4-like CDO28_RS15245 IPR012337 Ribonuclease H-like domain CDO28_RS15245 IPR014736 Transposase, Tn5-like, core CDO28_RS15245 IPR025399 Domain of unknown function DUF4372 CDO28_RS15255 IPR016936 Uncharacterised conserved protein UCP029693 CDO28_RS15260 IPR000559 Formate-tetrahydrofolate ligase, FTHFS CDO28_RS15260 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site CDO28_RS15260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15265 IPR009683 Extensin-like, C-terminal CDO28_RS15270 IPR000531 TonB-dependent receptor, beta-barrel CDO28_RS15270 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor CDO28_RS15270 IPR011276 TonB-dependent haem/haemoglobin receptor CDO28_RS15270 IPR012910 TonB-dependent receptor, plug CDO28_RS15275 IPR005801 ADC synthase CDO28_RS15275 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CDO28_RS15275 IPR006805 Anthranilate synthase component I, N-terminal CDO28_RS15275 IPR010112 Anthranilate synthase CDO28_RS15275 IPR015890 Chorismate binding, C-terminal CDO28_RS15275 IPR017926 Glutamine amidotransferase CDO28_RS15275 IPR029062 Class I glutamine amidotransferase-like CDO28_RS15280 IPR002524 Cation efflux protein CDO28_RS15280 IPR027469 Cation efflux protein transmembrane domain CDO28_RS15280 IPR027470 Cation efflux protein cytoplasmic domain CDO28_RS15285 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 CDO28_RS15285 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CDO28_RS15290 IPR002575 Aminoglycoside phosphotransferase CDO28_RS15290 IPR011009 Protein kinase-like domain CDO28_RS15290 IPR024165 Aminoglycoside 3-phosphotransferase CDO28_RS15295 IPR000182 GNAT domain CDO28_RS15295 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS15300 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein CDO28_RS15305 IPR027470 Cation efflux protein cytoplasmic domain CDO28_RS15310 IPR000531 TonB-dependent receptor, beta-barrel CDO28_RS15310 IPR012910 TonB-dependent receptor, plug CDO28_RS15315 IPR001907 ATP-dependent Clp protease proteolytic subunit CDO28_RS15315 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CDO28_RS15315 IPR029045 ClpP/crotonase-like domain CDO28_RS15315 IPR033135 CDO28_RS15315 CDO28_RS15325 IPR000891 Pyruvate carboxyltransferase CDO28_RS15325 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site CDO28_RS15325 IPR005668 2-isopropylmalate synthase CDO28_RS15325 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CDO28_RS15325 IPR013785 Aldolase-type TIM barrel CDO28_RS15330 IPR011660 Rv0623-like transcription factor CDO28_RS15330 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15335 IPR002716 PIN domain CDO28_RS15335 IPR022907 VapC family CDO28_RS15335 IPR029060 PIN domain-like CDO28_RS15345 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS15345 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15345 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS15345 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS15345 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS15345 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS15350 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS15350 IPR029052 Metallo-dependent phosphatase-like CDO28_RS15355 IPR000086 NUDIX hydrolase domain CDO28_RS15355 IPR015797 NUDIX hydrolase domain-like CDO28_RS15355 IPR020084 NUDIX hydrolase, conserved site CDO28_RS15360 IPR003812 Fido domain CDO28_RS15370 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS15370 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS15370 IPR012336 Thioredoxin-like fold CDO28_RS15370 IPR016639 Glutathione S-transferase (GST) CDO28_RS15375 IPR000182 GNAT domain CDO28_RS15375 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS15380 IPR029062 Class I glutamine amidotransferase-like CDO28_RS15385 IPR011933 Double transmembrane domain CDO28_RS15385 IPR024163 Aerotolerance regulator N-terminal CDO28_RS15385 IPR025297 Domain of unknown function DUF4159 CDO28_RS15385 IPR029062 Class I glutamine amidotransferase-like CDO28_RS15390 IPR002881 Domain of unknown function DUF58 CDO28_RS15395 IPR011703 ATPase, AAA-3 CDO28_RS15395 IPR016366 ATPase chaperone, AAA-type, MoxR, predicted CDO28_RS15395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15400 IPR010707 Protein of unknown function DUF1285 CDO28_RS15400 IPR023361 Protein of unknown function DUF1285, beta-roll domain CDO28_RS15405 IPR000086 NUDIX hydrolase domain CDO28_RS15405 IPR015797 NUDIX hydrolase domain-like CDO28_RS15410 IPR002646 Poly A polymerase, head domain CDO28_RS15410 IPR032828 CDO28_RS15410 CDO28_RS15415 IPR009409 Protein of unknown function DUF1059 CDO28_RS15420 IPR000836 Phosphoribosyltransferase domain CDO28_RS15420 IPR005764 Adenine phosphoribosyl transferase CDO28_RS15420 IPR029057 Phosphoribosyltransferase-like CDO28_RS15425 IPR002539 MaoC-like domain CDO28_RS15425 IPR029069 HotDog domain CDO28_RS15430 IPR002539 MaoC-like domain CDO28_RS15430 IPR029069 HotDog domain CDO28_RS15435 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CDO28_RS15435 IPR006073 GTP binding domain CDO28_RS15435 IPR012675 Beta-grasp domain CDO28_RS15435 IPR012676 TGS-like CDO28_RS15435 IPR013029 Domain of unknown function DUF933 CDO28_RS15435 IPR023192 TGS-like domain CDO28_RS15435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15440 IPR003769 Adaptor protein ClpS, core CDO28_RS15440 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CDO28_RS15440 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CDO28_RS15445 IPR001328 Peptidyl-tRNA hydrolase CDO28_RS15445 IPR018171 Peptidyl-tRNA hydrolase, conserved site CDO28_RS15450 IPR001021 Ribosomal protein L25, long-form CDO28_RS15450 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain CDO28_RS15450 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain CDO28_RS15450 IPR020057 Ribosomal protein L25, beta domain CDO28_RS15450 IPR029751 Ribosomal protein L25 CDO28_RS15455 IPR004711 Benzoate transporter CDO28_RS15460 IPR002197 DNA binding HTH domain, Fis-type CDO28_RS15460 IPR003018 GAF domain CDO28_RS15460 IPR009057 Homeodomain-like CDO28_RS15460 IPR029016 GAF domain-like CDO28_RS15465 IPR015590 Aldehyde dehydrogenase domain CDO28_RS15465 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS15465 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS15465 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS15465 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS15465 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS15470 IPR008497 Protein of unknown function DUF779 CDO28_RS15475 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS15480 IPR000836 Phosphoribosyltransferase domain CDO28_RS15480 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CDO28_RS15480 IPR005946 Ribose-phosphate diphosphokinase CDO28_RS15480 IPR029057 Phosphoribosyltransferase-like CDO28_RS15480 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CDO28_RS15490 IPR000587 Creatinase, N-terminal CDO28_RS15490 IPR000994 Peptidase M24, structural domain CDO28_RS15490 IPR028980 Creatinase/Aminopeptidase P, N-terminal CDO28_RS15490 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDO28_RS15495 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CDO28_RS15495 IPR011324 Cytotoxic necrotizing factor-like, catalytic CDO28_RS15500 IPR003788 Putative S-adenosyl-L-methionine-dependent methyltransferase MidA CDO28_RS15500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS15505 IPR001640 Prolipoprotein diacylglyceryl transferase CDO28_RS15510 IPR007475 Membrane fusogenic activity CDO28_RS15515 IPR019660 Putative sensory transduction regulator YbjN CDO28_RS15520 IPR000304 Pyrroline-5-carboxylate reductase CDO28_RS15520 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS15520 IPR016040 NAD(P)-binding domain CDO28_RS15520 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDO28_RS15520 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CDO28_RS15525 IPR002547 tRNA-binding domain CDO28_RS15525 IPR008231 Export-related chaperone protein CsaA CDO28_RS15525 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS15530 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS15530 IPR003660 HAMP linker domain CDO28_RS15530 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS15530 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS15535 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS15535 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS15535 IPR011006 CheY-like superfamily CDO28_RS15535 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15535 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS15540 IPR000835 MarR-type HTH domain CDO28_RS15540 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15540 IPR023187 Transcriptional regulator MarR-type, conserved site CDO28_RS15550 IPR003646 SH3-like domain, bacterial-type CDO28_RS15550 IPR009642 Protein of unknown function DUF1236 CDO28_RS15560 IPR001279 Beta-lactamase-like CDO28_RS15565 IPR012413 BA14k family CDO28_RS15570 IPR002059 Cold-shock protein, DNA-binding CDO28_RS15570 IPR011129 Cold shock protein CDO28_RS15570 IPR012156 Cold shock, CspA CDO28_RS15570 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS15570 IPR019844 Cold-shock conserved site CDO28_RS15575 IPR000620 Drug/metabolite transporter CDO28_RS15580 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CDO28_RS15580 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS15580 IPR012938 Glucose/Sorbosone dehydrogenase CDO28_RS15595 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDO28_RS15595 IPR004839 Aminotransferase, class I/classII CDO28_RS15595 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS15595 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS15595 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS15605 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDO28_RS15605 IPR016040 NAD(P)-binding domain CDO28_RS15610 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS15610 IPR016040 NAD(P)-binding domain CDO28_RS15610 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS15615 IPR000847 Transcription regulator HTH, LysR CDO28_RS15615 IPR005119 LysR, substrate-binding CDO28_RS15615 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15620 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain CDO28_RS15620 IPR006274 Carbamoyl-phosphate synthase, small subunit CDO28_RS15620 IPR017926 Glutamine amidotransferase CDO28_RS15620 IPR029062 Class I glutamine amidotransferase-like CDO28_RS15625 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related CDO28_RS15625 IPR019004 Uncharacterised domain YOR215C, mitochondrial CDO28_RS15625 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CDO28_RS15630 IPR002694 Zinc finger, CHC2-type CDO28_RS15630 IPR006171 Toprim domain CDO28_RS15630 IPR006295 DNA primase, DnaG CDO28_RS15630 IPR013264 DNA primase, catalytic core, N-terminal CDO28_RS15630 IPR019475 DNA primase, DnaB-helicase binding domain CDO28_RS15630 IPR030846 CDO28_RS15630 CDO28_RS15635 IPR001650 Helicase, C-terminal CDO28_RS15635 IPR002121 HRDC domain CDO28_RS15635 IPR004589 DNA helicase, ATP-dependent, RecQ type CDO28_RS15635 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CDO28_RS15635 IPR010997 HRDC-like CDO28_RS15635 IPR011545 DEAD/DEAH box helicase domain CDO28_RS15635 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15635 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS15635 IPR018982 RQC domain CDO28_RS15635 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15635 IPR032284 CDO28_RS15635 CDO28_RS15640 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CDO28_RS15640 IPR004839 Aminotransferase, class I/classII CDO28_RS15640 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase CDO28_RS15640 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS15640 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS15640 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS15645 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS15645 IPR004627 L-threonine 3-dehydrogenase CDO28_RS15645 IPR011032 GroES (chaperonin 10)-like CDO28_RS15645 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS15645 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS15645 IPR016040 NAD(P)-binding domain CDO28_RS15645 IPR020843 Polyketide synthase, enoylreductase CDO28_RS15650 IPR000943 RNA polymerase sigma-70 CDO28_RS15650 IPR007127 RNA polymerase sigma factor 70, region 1.1 CDO28_RS15650 IPR007624 RNA polymerase sigma-70 region 3 CDO28_RS15650 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS15650 IPR007630 RNA polymerase sigma-70 region 4 CDO28_RS15650 IPR007631 RNA polymerase sigma factor 70, non-essential domain CDO28_RS15650 IPR009042 RNA polymerase sigma-70 region 1.2 CDO28_RS15650 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15650 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CDO28_RS15650 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS15650 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS15650 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS15650 IPR028630 RNA polymerase sigma factor RpoD CDO28_RS15655 IPR014845 Uncharacterised protein GYD CDO28_RS15665 IPR008258 Lytic transglycosylase-like SLT domain CDO28_RS15665 IPR023346 Lysozyme-like domain CDO28_RS15670 IPR009874 Protein of unknown function DUF1428 CDO28_RS15670 IPR011008 Dimeric alpha-beta barrel CDO28_RS15675 IPR001602 Uncharacterised protein family UPF0047 CDO28_RS15680 IPR009959 Polyketide cyclase SnoaL-like domain CDO28_RS15680 IPR011721 Conserved hypothetical protein CHP02096 CDO28_RS15680 IPR032710 CDO28_RS15680 CDO28_RS15685 IPR000845 Nucleoside phosphorylase domain CDO28_RS15690 IPR007497 Protein of unknown function DUF541 CDO28_RS15710 IPR010033 HAD-superfamily phosphatase, subfamily IIIC CDO28_RS15710 IPR010037 FkbH domain CDO28_RS15710 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS15710 IPR023214 HAD-like domain CDO28_RS15715 IPR009081 Acyl carrier protein-like CDO28_RS15725 IPR004299 Membrane bound O-acyl transferase, MBOAT CDO28_RS15725 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB CDO28_RS15725 IPR028362 Alginate O-acetyltransferase AlgI CDO28_RS15730 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS15735 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA CDO28_RS15735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15740 IPR016186 C-type lectin-like CDO28_RS15740 IPR016187 C-type lectin fold CDO28_RS15745 IPR015124 Sulfotransferase Stf0 CDO28_RS15745 IPR024628 Sulphotransferase Stf0, domain CDO28_RS15745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15755 IPR000182 GNAT domain CDO28_RS15755 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS15760 IPR006439 HAD hydrolase, subfamily IA CDO28_RS15760 IPR023214 HAD-like domain CDO28_RS15775 IPR000262 FMN-dependent dehydrogenase CDO28_RS15775 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CDO28_RS15775 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CDO28_RS15775 IPR013785 Aldolase-type TIM barrel CDO28_RS15790 IPR000182 GNAT domain CDO28_RS15790 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS15795 IPR003679 Aminoglycoside 3-N-acetyltransferase CDO28_RS15805 IPR011990 Tetratricopeptide-like helical domain CDO28_RS15805 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS15815 IPR003776 YcaO-like domain CDO28_RS15830 IPR002035 von Willebrand factor, type A CDO28_RS15830 IPR010607 Protein of unknown function DUF1194 CDO28_RS15835 IPR016883 Uncharacterised conserved protein UCP028431 CDO28_RS15835 IPR019282 Domain of unknown function DUF2329 CDO28_RS15840 IPR013901 Protein of unknown function DUF1772 CDO28_RS15845 IPR001753 Crotonase superfamily CDO28_RS15845 IPR029045 ClpP/crotonase-like domain CDO28_RS15850 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS15850 IPR009057 Homeodomain-like CDO28_RS15850 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS15850 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS15855 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS15855 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS15860 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDO28_RS15860 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS15860 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS15860 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS15865 IPR012037 Alpha/beta-hydrolase family CDO28_RS15865 IPR027787 Alpha/beta-hydrolase, catalytic domain CDO28_RS15865 IPR027788 Alpha/beta-hydrolase, N-terminal domain CDO28_RS15870 IPR000847 Transcription regulator HTH, LysR CDO28_RS15870 IPR005119 LysR, substrate-binding CDO28_RS15870 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15875 IPR006076 FAD dependent oxidoreductase CDO28_RS15875 IPR006222 Glycine cleavage T-protein, N-terminal CDO28_RS15875 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDO28_RS15875 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS15875 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDO28_RS15875 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CDO28_RS15875 IPR032503 CDO28_RS15875 CDO28_RS15880 IPR006076 FAD dependent oxidoreductase CDO28_RS15880 IPR006222 Glycine cleavage T-protein, N-terminal CDO28_RS15880 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDO28_RS15880 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS15880 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDO28_RS15880 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CDO28_RS15880 IPR032503 CDO28_RS15880 CDO28_RS15885 IPR010426 Trimethylamine methyltransferase CDO28_RS15895 IPR002491 ABC transporter periplasmic binding domain CDO28_RS15900 IPR008090 Ferric iron reductase CDO28_RS15900 IPR022770 Ferric iron reductase FhuF domain CDO28_RS15900 IPR024726 Ferric iron reductase, C-terminal CDO28_RS15905 IPR000531 TonB-dependent receptor, beta-barrel CDO28_RS15905 IPR010105 TonB-dependent siderophore receptor CDO28_RS15905 IPR012910 TonB-dependent receptor, plug CDO28_RS15910 IPR015590 Aldehyde dehydrogenase domain CDO28_RS15910 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS15910 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS15910 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS15910 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS15915 IPR000515 MetI-like domain CDO28_RS15920 IPR000515 MetI-like domain CDO28_RS15925 IPR003439 ABC transporter-like CDO28_RS15925 IPR003593 AAA+ ATPase domain CDO28_RS15925 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS15925 IPR013611 Transport-associated OB, type 2 CDO28_RS15925 IPR017871 ABC transporter, conserved site CDO28_RS15925 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15930 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CDO28_RS15935 IPR000847 Transcription regulator HTH, LysR CDO28_RS15935 IPR005119 LysR, substrate-binding CDO28_RS15935 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS15940 IPR002168 Lipase, GDXG, active site CDO28_RS15940 IPR013094 Alpha/beta hydrolase fold-3 CDO28_RS15940 IPR029058 Alpha/Beta hydrolase fold CDO28_RS15945 IPR018717 Domain of unknown function DUF2241 CDO28_RS15945 IPR027795 GATS-like ACT domain CDO28_RS15950 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain CDO28_RS15950 IPR005674 CocE/Serine esterase CDO28_RS15950 IPR008979 Galactose-binding domain-like CDO28_RS15950 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal CDO28_RS15950 IPR029058 Alpha/Beta hydrolase fold CDO28_RS15955 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS15955 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDO28_RS15955 IPR030678 CDO28_RS15955 CDO28_RS15960 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS15960 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS15965 IPR003439 ABC transporter-like CDO28_RS15965 IPR003593 AAA+ ATPase domain CDO28_RS15965 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS15965 IPR017871 ABC transporter, conserved site CDO28_RS15965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS15970 IPR000515 MetI-like domain CDO28_RS15975 IPR000515 MetI-like domain CDO28_RS15980 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS15980 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CDO28_RS15980 IPR030678 CDO28_RS15980 CDO28_RS15985 IPR001753 Crotonase superfamily CDO28_RS15985 IPR014748 Crontonase, C-terminal CDO28_RS15985 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CDO28_RS15985 IPR029045 ClpP/crotonase-like domain CDO28_RS15990 IPR003781 CoA-binding CDO28_RS15990 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS15990 IPR016040 NAD(P)-binding domain CDO28_RS15990 IPR016102 Succinyl-CoA synthetase-like CDO28_RS15990 IPR032875 CDO28_RS15990 CDO28_RS16000 IPR006089 Acyl-CoA dehydrogenase, conserved site CDO28_RS16000 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDO28_RS16000 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDO28_RS16000 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CDO28_RS16000 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDO28_RS16005 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDO28_RS16005 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDO28_RS16005 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS16005 IPR013328 Dehydrogenase, multihelical CDO28_RS16005 IPR016040 NAD(P)-binding domain CDO28_RS16005 IPR026578 L-carnitine dehydrogenase CDO28_RS16005 IPR029069 HotDog domain CDO28_RS16010 IPR008567 3-keto-5-aminohexanoate cleavage enzyme CDO28_RS16010 IPR013785 Aldolase-type TIM barrel CDO28_RS16015 IPR009057 Homeodomain-like CDO28_RS16015 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS16015 IPR018062 HTH domain AraC-type, conserved site CDO28_RS16015 IPR029062 Class I glutamine amidotransferase-like CDO28_RS16020 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS16020 IPR016040 NAD(P)-binding domain CDO28_RS16020 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS16025 IPR000515 MetI-like domain CDO28_RS16030 IPR000515 MetI-like domain CDO28_RS16035 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CDO28_RS16040 IPR003439 ABC transporter-like CDO28_RS16040 IPR003593 AAA+ ATPase domain CDO28_RS16040 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CDO28_RS16040 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS16040 IPR013611 Transport-associated OB, type 2 CDO28_RS16040 IPR017871 ABC transporter, conserved site CDO28_RS16040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16045 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS16045 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS16045 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS16050 IPR007324 Sugar-binding domain, putative CDO28_RS16055 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS16055 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDO28_RS16060 IPR000515 MetI-like domain CDO28_RS16065 IPR000515 MetI-like domain CDO28_RS16070 IPR003439 ABC transporter-like CDO28_RS16070 IPR003593 AAA+ ATPase domain CDO28_RS16070 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS16070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16075 IPR003439 ABC transporter-like CDO28_RS16075 IPR003593 AAA+ ATPase domain CDO28_RS16075 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS16075 IPR013611 Transport-associated OB, type 2 CDO28_RS16075 IPR017871 ABC transporter, conserved site CDO28_RS16075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16080 IPR000577 CDO28_RS16080 CDO28_RS16080 IPR018483 Carbohydrate kinase, FGGY, conserved site CDO28_RS16080 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS16080 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDO28_RS16085 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDO28_RS16085 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS16085 IPR016040 NAD(P)-binding domain CDO28_RS16085 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDO28_RS16085 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDO28_RS16090 IPR001303 Class II aldolase/adducin N-terminal CDO28_RS16095 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CDO28_RS16095 IPR006076 FAD dependent oxidoreductase CDO28_RS16095 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS16095 IPR031656 CDO28_RS16095 CDO28_RS16100 IPR001303 Class II aldolase/adducin N-terminal CDO28_RS16105 IPR000577 CDO28_RS16105 CDO28_RS16105 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS16105 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDO28_RS16110 IPR006356 HAD-superfamily hydrolase, subfamily IIA, hypothetical 3 CDO28_RS16110 IPR006357 HAD-superfamily hydrolase, subfamily IIA CDO28_RS16110 IPR023214 HAD-like domain CDO28_RS16115 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS16120 IPR001034 HTH DeoR N-terminal domain CDO28_RS16120 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS16120 IPR014036 DeoR C-terminal sensor domain CDO28_RS16120 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CDO28_RS16125 IPR000652 Triosephosphate isomerase CDO28_RS16125 IPR013785 Aldolase-type TIM barrel CDO28_RS16125 IPR020861 Triosephosphate isomerase, active site CDO28_RS16125 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CDO28_RS16130 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CDO28_RS16135 IPR002559 Transposase, IS4-like CDO28_RS16135 IPR032806 CDO28_RS16135 CDO28_RS16140 IPR001207 Transposase, mutator type CDO28_RS16145 IPR000531 TonB-dependent receptor, beta-barrel CDO28_RS16145 IPR010105 TonB-dependent siderophore receptor CDO28_RS16145 IPR012910 TonB-dependent receptor, plug CDO28_RS16150 IPR009057 Homeodomain-like CDO28_RS16150 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS16150 IPR018062 HTH domain AraC-type, conserved site CDO28_RS16150 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS16155 IPR002180 6,7-dimethyl-8-ribityllumazine synthase CDO28_RS16160 IPR003439 ABC transporter-like CDO28_RS16160 IPR003593 AAA+ ATPase domain CDO28_RS16160 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS16160 IPR013611 Transport-associated OB, type 2 CDO28_RS16160 IPR017871 ABC transporter, conserved site CDO28_RS16160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16165 IPR000515 MetI-like domain CDO28_RS16170 IPR000515 MetI-like domain CDO28_RS16180 IPR000281 Helix-turn-helix protein RpiR CDO28_RS16180 IPR001347 Sugar isomerase (SIS) CDO28_RS16180 IPR009057 Homeodomain-like CDO28_RS16180 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS16185 IPR002508 Cell wall hydrolase/autolysin, catalytic CDO28_RS16185 IPR007709 N-formylglutamate amidohydrolase CDO28_RS16185 IPR011227 Uncharacterised conserved protein UCP029730 CDO28_RS16190 IPR002293 Amino acid/polyamine transporter I CDO28_RS16195 IPR008146 Glutamine synthetase, catalytic domain CDO28_RS16195 IPR008147 Glutamine synthetase, beta-Grasp CDO28_RS16195 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDO28_RS16200 IPR015590 Aldehyde dehydrogenase domain CDO28_RS16200 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS16200 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS16200 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS16200 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS16205 IPR001670 Alcohol dehydrogenase, iron-type CDO28_RS16205 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CDO28_RS16210 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDO28_RS16210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16215 IPR006076 FAD dependent oxidoreductase CDO28_RS16215 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS16220 IPR002477 Peptidoglycan binding-like CDO28_RS16220 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS16225 IPR027839 Protein of unknown function DUF4432 CDO28_RS16230 IPR005939 Beta-lactamase hydrolase-like CDO28_RS16230 IPR029021 Protein-tyrosine phosphatase-like CDO28_RS16240 IPR000399 TPP-binding enzyme, conserved site CDO28_RS16240 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDO28_RS16240 IPR012000 Thiamine pyrophosphate enzyme, central domain CDO28_RS16240 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDO28_RS16240 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS16240 IPR029061 Thiamin diphosphate-binding fold CDO28_RS16245 IPR000620 Drug/metabolite transporter CDO28_RS16250 IPR022742 Putative lysophospholipase CDO28_RS16250 IPR029058 Alpha/Beta hydrolase fold CDO28_RS16255 IPR001568 Ribonuclease T2-like CDO28_RS16255 IPR018188 Ribonuclease T2, active site CDO28_RS16260 IPR003439 ABC transporter-like CDO28_RS16260 IPR003593 AAA+ ATPase domain CDO28_RS16260 IPR017871 ABC transporter, conserved site CDO28_RS16260 IPR022374 ABC transporter, ATP-binding protein, ChvD CDO28_RS16260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16260 IPR032781 CDO28_RS16260 CDO28_RS16265 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS16265 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS16265 IPR013216 Methyltransferase type 11 CDO28_RS16265 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS16270 IPR003171 Methylenetetrahydrofolate reductase CDO28_RS16270 IPR004620 5,10-methylenetetrahydrofolate reductase CDO28_RS16270 IPR029041 FAD-linked oxidoreductase-like CDO28_RS16280 IPR000620 Drug/metabolite transporter CDO28_RS16285 IPR002477 Peptidoglycan binding-like CDO28_RS16285 IPR011970 Lytic murein transglycosylase CDO28_RS16285 IPR023346 Lysozyme-like domain CDO28_RS16285 IPR031304 CDO28_RS16285 CDO28_RS16290 IPR002053 Glycoside hydrolase, family 25 CDO28_RS16290 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS16290 IPR017853 Glycoside hydrolase, superfamily CDO28_RS16290 IPR018077 Glycoside hydrolase, family 25 subgroup CDO28_RS16295 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS16300 IPR021829 Protein of unknown function DUF3419 CDO28_RS16300 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS16305 IPR001466 Beta-lactamase-related CDO28_RS16305 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS16310 IPR008258 Lytic transglycosylase-like SLT domain CDO28_RS16310 IPR023346 Lysozyme-like domain CDO28_RS16315 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS16320 IPR000023 Phosphofructokinase domain CDO28_RS16320 IPR011405 Pyrophosphate-dependent phosphofructokinase CDO28_RS16320 IPR022953 Phosphofructokinase CDO28_RS16325 IPR001623 DnaJ domain CDO28_RS16325 IPR007791 Heat shock protein DnaJ-like protein DjlA CDO28_RS16325 IPR029024 TerB-like CDO28_RS16330 IPR002477 Peptidoglycan binding-like CDO28_RS16330 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CDO28_RS16335 IPR008258 Lytic transglycosylase-like SLT domain CDO28_RS16335 IPR023346 Lysozyme-like domain CDO28_RS16340 IPR006076 FAD dependent oxidoreductase CDO28_RS16340 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS16350 IPR003444 MraZ CDO28_RS16350 IPR020603 MraZ domain CDO28_RS16355 IPR002903 Ribosomal RNA small subunit methyltransferase H CDO28_RS16355 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain CDO28_RS16355 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS16365 IPR001460 Penicillin-binding protein, transpeptidase CDO28_RS16365 IPR005311 Penicillin-binding protein, dimerisation domain CDO28_RS16365 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS16370 IPR000713 Mur ligase, N-terminal CDO28_RS16370 IPR004101 Mur ligase, C-terminal CDO28_RS16370 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CDO28_RS16370 IPR013221 Mur ligase, central CDO28_RS16375 IPR000713 Mur ligase, N-terminal CDO28_RS16375 IPR004101 Mur ligase, C-terminal CDO28_RS16375 IPR005863 UDP-MurNAc-pentapeptide synthetase CDO28_RS16375 IPR013221 Mur ligase, central CDO28_RS16380 IPR000715 Glycosyl transferase, family 4 CDO28_RS16380 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CDO28_RS16380 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CDO28_RS16385 IPR004101 Mur ligase, C-terminal CDO28_RS16385 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CDO28_RS16385 IPR013221 Mur ligase, central CDO28_RS16385 IPR016040 NAD(P)-binding domain CDO28_RS16385 IPR018109 Folylpolyglutamate synthetase, conserved site CDO28_RS16390 IPR001182 Cell cycle protein FtsW/RodA CDO28_RS16390 IPR013437 Cell division protein FtsW CDO28_RS16395 IPR004276 Glycosyl transferase, family 28 CDO28_RS16395 IPR006009 N-acetylglucosaminyltransferase, MurG CDO28_RS16395 IPR007235 Glycosyl transferase, family 28, C-terminal CDO28_RS16400 IPR000713 Mur ligase, N-terminal CDO28_RS16400 IPR004101 Mur ligase, C-terminal CDO28_RS16400 IPR005758 UDP-N-acetylmuramate-alanine ligase CDO28_RS16400 IPR013221 Mur ligase, central CDO28_RS16400 IPR016040 NAD(P)-binding domain CDO28_RS16405 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CDO28_RS16405 IPR006094 FAD linked oxidase, N-terminal CDO28_RS16405 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CDO28_RS16405 IPR016166 FAD-binding, type 2 CDO28_RS16405 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS16405 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS16410 IPR004736 Citrate-proton symport CDO28_RS16410 IPR005828 General substrate transporter CDO28_RS16410 IPR005829 Sugar transporter, conserved site CDO28_RS16410 IPR011701 Major facilitator superfamily CDO28_RS16410 IPR020846 Major facilitator superfamily domain CDO28_RS16415 IPR000425 Major intrinsic protein CDO28_RS16415 IPR022357 Major intrinsic protein, conserved site CDO28_RS16415 IPR023271 Aquaporin-like CDO28_RS16415 IPR023743 Aquaporin Z CDO28_RS16420 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CDO28_RS16420 IPR005905 D-alanine--D-alanine ligase CDO28_RS16420 IPR011095 D-alanine--D-alanine ligase, C-terminal CDO28_RS16420 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CDO28_RS16420 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS16420 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS16420 IPR016185 Pre-ATP-grasp domain CDO28_RS16425 IPR005548 Cell division protein FtsQ/DivIB CDO28_RS16425 IPR013685 Polypeptide-transport-associated, FtsQ-type CDO28_RS16425 IPR026579 Cell division protein FtsQ CDO28_RS16430 IPR003494 SHS2 domain inserted in FtsA CDO28_RS16430 IPR020823 Cell division protein FtsA CDO28_RS16435 IPR000158 Cell division protein FtsZ CDO28_RS16435 IPR003008 Tubulin/FtsZ, GTPase domain CDO28_RS16435 IPR008280 Tubulin/FtsZ, C-terminal CDO28_RS16435 IPR017844 Cell division protein FtsZ, C-terminal extension CDO28_RS16435 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CDO28_RS16435 IPR020805 Cell division protein FtsZ, conserved site CDO28_RS16435 IPR024757 Cell division protein FtsZ, C-terminal CDO28_RS16440 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase CDO28_RS16440 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal CDO28_RS16440 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal CDO28_RS16440 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS16445 IPR011990 Tetratricopeptide-like helical domain CDO28_RS16445 IPR017689 Outer membrane protein assembly factor BamD CDO28_RS16450 IPR003395 RecF/RecN/SMC, N-terminal CDO28_RS16450 IPR004604 DNA recombination/repair protein RecN CDO28_RS16450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16455 IPR001357 BRCT domain CDO28_RS16455 IPR001679 NAD-dependent DNA ligase CDO28_RS16455 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CDO28_RS16455 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CDO28_RS16455 IPR004150 NAD-dependent DNA ligase, OB-fold CDO28_RS16455 IPR010994 RuvA domain 2-like CDO28_RS16455 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS16455 IPR013839 NAD-dependent DNA ligase, adenylation CDO28_RS16455 IPR013840 NAD-dependent DNA ligase, N-terminal CDO28_RS16455 IPR018239 NAD-dependent DNA ligase, active site CDO28_RS16455 IPR033136 CDO28_RS16455 CDO28_RS16460 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS16465 IPR003721 Pantoate-beta-alanine ligase CDO28_RS16465 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS16470 IPR003700 Ketopantoate hydroxymethyltransferase CDO28_RS16470 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS16475 IPR011606 Branched-chain amino acid transport, permease CDO28_RS16480 IPR008407 Branched-chain amino acid transport, AzlD CDO28_RS16490 IPR000587 Creatinase, N-terminal CDO28_RS16490 IPR000994 Peptidase M24, structural domain CDO28_RS16490 IPR028980 Creatinase/Aminopeptidase P, N-terminal CDO28_RS16490 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDO28_RS16490 IPR032416 CDO28_RS16490 CDO28_RS16505 IPR006119 Resolvase, N-terminal CDO28_RS16510 IPR004498 Ribosomal protein L11 methyltransferase CDO28_RS16510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS16515 IPR003782 Copper chaperone SCO1/SenC CDO28_RS16515 IPR012336 Thioredoxin-like fold CDO28_RS16525 IPR003660 HAMP linker domain CDO28_RS16525 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDO28_RS16530 IPR002545 CheW-like protein CDO28_RS16545 IPR010292 Uncharacterised protein family CreA CDO28_RS16550 IPR000160 GGDEF domain CDO28_RS16550 IPR029787 Nucleotide cyclase CDO28_RS16555 IPR000836 Phosphoribosyltransferase domain CDO28_RS16555 IPR029057 Phosphoribosyltransferase-like CDO28_RS16560 IPR000182 GNAT domain CDO28_RS16560 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS16565 IPR013986 DExx box DNA helicase domain CDO28_RS16565 IPR014016 UvrD-like Helicase, ATP-binding domain CDO28_RS16565 IPR014017 DNA helicase, UvrD-like, C-terminal CDO28_RS16565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16570 IPR003779 Carboxymuconolactone decarboxylase-like CDO28_RS16570 IPR004675 Alkylhydroperoxidase AhpD core CDO28_RS16570 IPR029032 AhpD-like CDO28_RS16575 IPR007325 Kynurenine formamidase CDO28_RS16580 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS16580 IPR032317 CDO28_RS16580 CDO28_RS16585 IPR001036 Acriflavin resistance protein CDO28_RS16585 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDO28_RS16590 IPR013901 Protein of unknown function DUF1772 CDO28_RS16595 IPR004113 FAD-linked oxidase, C-terminal CDO28_RS16595 IPR006094 FAD linked oxidase, N-terminal CDO28_RS16595 IPR016164 FAD-linked oxidase-like, C-terminal CDO28_RS16595 IPR016166 FAD-binding, type 2 CDO28_RS16595 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS16595 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS16595 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDO28_RS16600 IPR007844 AsmA CDO28_RS16600 IPR017023 Uncharacterised conserved protein UCP034039 CDO28_RS16600 IPR032712 CDO28_RS16600 CDO28_RS16605 IPR002559 Transposase, IS4-like CDO28_RS16605 IPR012337 Ribonuclease H-like domain CDO28_RS16605 IPR014736 Transposase, Tn5-like, core CDO28_RS16605 IPR025399 Domain of unknown function DUF4372 CDO28_RS16610 IPR027373 Ribbon-helix-helix domain CDO28_RS16615 IPR025227 Protein of unknown function DUF4169 CDO28_RS16620 IPR007481 Stringent starvation protein B CDO28_RS16630 IPR021274 Protein of unknown function DUF2853 CDO28_RS16630 IPR023154 Jann4075-like domain CDO28_RS16655 IPR000398 Thymidylate synthase CDO28_RS16655 IPR020940 Thymidylate synthase, active site CDO28_RS16655 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CDO28_RS16660 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS16660 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS16660 IPR012336 Thioredoxin-like fold CDO28_RS16665 IPR001796 Dihydrofolate reductase domain CDO28_RS16665 IPR012259 Dihydrofolate reductase CDO28_RS16665 IPR024072 Dihydrofolate reductase-like domain CDO28_RS16670 IPR001107 Band 7 protein CDO28_RS16670 IPR010201 HflK CDO28_RS16670 IPR020980 Menbrane protein HflK, N-terminal CDO28_RS16675 IPR001107 Band 7 protein CDO28_RS16675 IPR010200 HflC CDO28_RS16680 IPR019201 Protein of unknown function DUF2065 CDO28_RS16685 IPR016540 Uncharacterised conserved protein UCP008459 CDO28_RS16685 IPR027795 GATS-like ACT domain CDO28_RS16690 IPR001478 PDZ domain CDO28_RS16690 IPR001940 Peptidase S1C CDO28_RS16690 IPR009003 Trypsin-like cysteine/serine peptidase domain CDO28_RS16690 IPR011782 Peptidase S1C, Do CDO28_RS16695 IPR000182 GNAT domain CDO28_RS16695 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS16700 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like CDO28_RS16700 IPR023190 Phosphoserine phosphatase, domain 2 CDO28_RS16700 IPR023214 HAD-like domain CDO28_RS16705 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase CDO28_RS16705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16715 IPR032710 CDO28_RS16715 CDO28_RS16720 IPR002789 Domain of unknown function DUF87 CDO28_RS16720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16725 IPR000399 TPP-binding enzyme, conserved site CDO28_RS16725 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDO28_RS16725 IPR012000 Thiamine pyrophosphate enzyme, central domain CDO28_RS16725 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDO28_RS16725 IPR012846 Acetolactate synthase, large subunit, biosynthetic CDO28_RS16725 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS16725 IPR029061 Thiamin diphosphate-binding fold CDO28_RS16730 IPR002912 ACT domain CDO28_RS16730 IPR004789 Acetolactate synthase, small subunit CDO28_RS16730 IPR019455 Acetolactate synthase, small subunit, C-terminal CDO28_RS16735 IPR020471 Aldo/keto reductase subgroup CDO28_RS16735 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS16740 IPR002059 Cold-shock protein, DNA-binding CDO28_RS16740 IPR011129 Cold shock protein CDO28_RS16740 IPR012156 Cold shock, CspA CDO28_RS16740 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS16740 IPR019844 Cold-shock conserved site CDO28_RS16750 IPR013216 Methyltransferase type 11 CDO28_RS16750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS16755 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS16760 IPR004232 Nitrile hydratase alpha /Thiocyanate hydrolase gamma CDO28_RS16760 IPR018141 Nitrile hydratase, alpha subunit CDO28_RS16760 IPR023900 Nitrile hydratase alpha subunit /Thiocyanate hydrolase gamma subunit CDO28_RS16765 IPR003168 Nitrile hydratase, beta subunit CDO28_RS16765 IPR008990 Electron transport accessory protein-like domain CDO28_RS16765 IPR024690 Nitrile hydratase beta subunit domain CDO28_RS16770 IPR008990 Electron transport accessory protein-like domain CDO28_RS16770 IPR023808 Nitrile hydratase accessory protein, putative CDO28_RS16770 IPR024690 Nitrile hydratase beta subunit domain CDO28_RS16780 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS16780 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS16780 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS16780 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS16780 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS16780 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS16785 IPR005297 Lipoprotein repeat CDO28_RS16785 IPR014558 Uncharacterised conserved lipoprotein CDO28_RS16795 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS16800 IPR007820 AbrB family CDO28_RS16800 IPR017516 AbrB duplication CDO28_RS16805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16805 IPR027785 UvrD-like helicase C-terminal domain CDO28_RS16810 IPR002641 Patatin/Phospholipase A2-related CDO28_RS16810 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDO28_RS16815 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS16815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16815 IPR029787 Nucleotide cyclase CDO28_RS16820 IPR003776 YcaO-like domain CDO28_RS16825 IPR012924 TfuA-like, core CDO28_RS16840 IPR002048 EF-hand domain CDO28_RS16840 IPR011992 EF-hand domain pair CDO28_RS16840 IPR018247 EF-Hand 1, calcium-binding site CDO28_RS16855 IPR010296 Protein of unknown function DUF899, thioredoxin-like CDO28_RS16855 IPR012336 Thioredoxin-like fold CDO28_RS16860 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ CDO28_RS16860 IPR013785 Aldolase-type TIM barrel CDO28_RS16865 IPR000524 Transcription regulator HTH, GntR CDO28_RS16865 IPR004839 Aminotransferase, class I/classII CDO28_RS16865 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS16865 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS16865 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS16870 IPR009325 Protein of unknown function DUF983 CDO28_RS16875 IPR008030 NmrA-like domain CDO28_RS16875 IPR016040 NAD(P)-binding domain CDO28_RS16880 IPR002577 Helix-turn-helix, HxlR type CDO28_RS16880 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS16885 IPR001920 Asp/Glu racemase CDO28_RS16885 IPR004380 Aspartate racemase CDO28_RS16885 IPR015942 Asp/Glu/hydantoin racemase CDO28_RS16890 IPR000485 AsnC-type HTH domain CDO28_RS16890 IPR011008 Dimeric alpha-beta barrel CDO28_RS16890 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS16890 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS16890 IPR019888 Transcription regulator AsnC-type CDO28_RS16895 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS16900 IPR000281 Helix-turn-helix protein RpiR CDO28_RS16900 IPR001347 Sugar isomerase (SIS) CDO28_RS16900 IPR009057 Homeodomain-like CDO28_RS16900 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS16910 IPR005828 General substrate transporter CDO28_RS16910 IPR020846 Major facilitator superfamily domain CDO28_RS16920 IPR002575 Aminoglycoside phosphotransferase CDO28_RS16920 IPR011009 Protein kinase-like domain CDO28_RS16925 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CDO28_RS16935 IPR010319 Transglutaminase-like cysteine peptidase, predicted CDO28_RS16940 IPR003439 ABC transporter-like CDO28_RS16940 IPR003593 AAA+ ATPase domain CDO28_RS16940 IPR003838 Permease FtsX-like CDO28_RS16940 IPR017871 ABC transporter, conserved site CDO28_RS16940 IPR025857 MacB-like periplasmic core domain CDO28_RS16940 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS16945 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS16945 IPR032317 CDO28_RS16945 CDO28_RS16950 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS16950 IPR009057 Homeodomain-like CDO28_RS16950 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS16950 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS16955 IPR000506 Acetohydroxy acid isomeroreductase C-terminal CDO28_RS16955 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS16955 IPR013023 Acetohydroxy acid isomeroreductase CDO28_RS16955 IPR013116 Acetohydroxy acid isomeroreductase, catalytic CDO28_RS16955 IPR013328 Dehydrogenase, multihelical CDO28_RS16955 IPR016040 NAD(P)-binding domain CDO28_RS16965 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS16965 IPR029787 Nucleotide cyclase CDO28_RS16970 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CDO28_RS16975 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS16985 IPR004839 Aminotransferase, class I/classII CDO28_RS16985 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS16985 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS16985 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS16990 IPR002559 Transposase, IS4-like CDO28_RS16990 IPR032806 CDO28_RS16990 CDO28_RS16995 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS17000 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS17000 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS17000 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS17000 IPR012336 Thioredoxin-like fold CDO28_RS17005 IPR001911 Ribosomal protein S21 CDO28_RS17015 IPR002059 Cold-shock protein, DNA-binding CDO28_RS17015 IPR011129 Cold shock protein CDO28_RS17015 IPR012156 Cold shock, CspA CDO28_RS17015 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS17015 IPR019844 Cold-shock conserved site CDO28_RS17025 IPR026045 Ferric binding protein CDO28_RS17030 IPR000515 MetI-like domain CDO28_RS17035 IPR003439 ABC transporter-like CDO28_RS17035 IPR003593 AAA+ ATPase domain CDO28_RS17035 IPR017871 ABC transporter, conserved site CDO28_RS17035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17040 IPR003593 AAA+ ATPase domain CDO28_RS17040 IPR006379 HAD-superfamily hydrolase, subfamily IIB CDO28_RS17040 IPR023214 HAD-like domain CDO28_RS17040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17050 IPR000158 Cell division protein FtsZ CDO28_RS17050 IPR003008 Tubulin/FtsZ, GTPase domain CDO28_RS17050 IPR008280 Tubulin/FtsZ, C-terminal CDO28_RS17050 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CDO28_RS17050 IPR020805 Cell division protein FtsZ, conserved site CDO28_RS17050 IPR024757 Cell division protein FtsZ, C-terminal CDO28_RS17055 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS17055 IPR011990 Tetratricopeptide-like helical domain CDO28_RS17055 IPR019734 Tetratricopeptide repeat CDO28_RS17055 IPR029787 Nucleotide cyclase CDO28_RS17060 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CDO28_RS17060 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS17060 IPR012938 Glucose/Sorbosone dehydrogenase CDO28_RS17065 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS17065 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDO28_RS17065 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like CDO28_RS17070 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS17075 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS17080 IPR011050 Pectin lyase fold/virulence factor CDO28_RS17080 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal CDO28_RS17090 IPR000064 Endopeptidase, NLPC/P60 domain CDO28_RS17090 IPR013423 Conserved hypothetical protein CHP02594 CDO28_RS17095 IPR005135 Endonuclease/exonuclease/phosphatase CDO28_RS17100 IPR015797 NUDIX hydrolase domain-like CDO28_RS17105 IPR003719 Phenazine biosynthesis PhzF protein CDO28_RS17115 IPR010985 Ribbon-helix-helix CDO28_RS17115 IPR013321 Arc-type ribbon-helix-helix CDO28_RS17115 IPR031807 CDO28_RS17115 CDO28_RS17120 IPR012933 HicA mRNA interferase family CDO28_RS17125 IPR015124 Sulfotransferase Stf0 CDO28_RS17125 IPR024628 Sulphotransferase Stf0, domain CDO28_RS17125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17135 IPR003997 RTX secretion protein D, Gram-negative bacteria CDO28_RS17135 IPR010129 Type I secretion membrane fusion protein, HlyD CDO28_RS17140 IPR003439 ABC transporter-like CDO28_RS17140 IPR003593 AAA+ ATPase domain CDO28_RS17140 IPR010128 ATPase, type I secretion system, PrtD CDO28_RS17140 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS17140 IPR017871 ABC transporter, conserved site CDO28_RS17140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17145 IPR010495 Haem-binding HasA CDO28_RS17145 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS17145 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS17150 IPR000531 TonB-dependent receptor, beta-barrel CDO28_RS17150 IPR011276 TonB-dependent haem/haemoglobin receptor CDO28_RS17150 IPR011662 Secretin/TonB, short N-terminal CDO28_RS17150 IPR012910 TonB-dependent receptor, plug CDO28_RS17155 IPR006860 FecR protein CDO28_RS17155 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CDO28_RS17155 IPR032623 CDO28_RS17155 CDO28_RS17160 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS17160 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS17160 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS17160 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS17160 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS17160 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS17165 IPR007379 Tim44-like domain CDO28_RS17165 IPR032710 CDO28_RS17165 CDO28_RS17170 IPR001646 Pentapeptide repeat CDO28_RS17185 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS17185 IPR015927 Peptidase S24/S26A/S26B/S26C CDO28_RS17185 IPR019759 Peptidase S24/S26A/S26B CDO28_RS17185 IPR028360 Peptidase S24/S26, beta-ribbon domain CDO28_RS17190 IPR010921 Trp repressor/replication initiator CDO28_RS17190 IPR013159 Chromosomal replication initiator, DnaA C-terminal CDO28_RS17200 IPR012413 BA14k family CDO28_RS17235 IPR002559 Transposase, IS4-like CDO28_RS17235 IPR032806 CDO28_RS17235 CDO28_RS17240 IPR023616 Cytochrome c oxidase, subunit I domain CDO28_RS17245 IPR021738 Protein of unknown function DUF3309 CDO28_RS17250 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS17250 IPR011057 Mss4-like CDO28_RS17255 IPR004921 Terminase, large subunit CDO28_RS17265 IPR001173 Glycosyltransferase 2-like CDO28_RS17265 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS17275 IPR023346 Lysozyme-like domain CDO28_RS17285 IPR010889 Protein of unknown function DUF1515 CDO28_RS17300 IPR004680 Citrate transporter-like domain CDO28_RS17300 IPR006037 Regulator of K+ conductance, C-terminal CDO28_RS17305 IPR010323 Protein of unknown function DUF924 CDO28_RS17305 IPR011990 Tetratricopeptide-like helical domain CDO28_RS17310 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS17310 IPR011057 Mss4-like CDO28_RS17315 IPR006685 Mechanosensitive ion channel MscS CDO28_RS17315 IPR010920 Like-Sm (LSM) domain CDO28_RS17315 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CDO28_RS17315 IPR011066 Mechanosensitive ion channel MscS, C-terminal CDO28_RS17320 IPR005496 Integral membrane protein TerC CDO28_RS17320 IPR022301 Integral membrane protein YjbE CDO28_RS17340 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CDO28_RS17340 IPR024072 Dihydrofolate reductase-like domain CDO28_RS17345 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS17345 IPR029787 Nucleotide cyclase CDO28_RS17350 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS17350 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS17350 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS17355 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS17355 IPR011006 CheY-like superfamily CDO28_RS17360 IPR002818 ThiJ/PfpI CDO28_RS17360 IPR009057 Homeodomain-like CDO28_RS17360 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS17360 IPR018062 HTH domain AraC-type, conserved site CDO28_RS17360 IPR029062 Class I glutamine amidotransferase-like CDO28_RS17365 IPR003735 Metal-sensitive transcriptional repressor CDO28_RS17370 IPR002524 Cation efflux protein CDO28_RS17370 IPR027469 Cation efflux protein transmembrane domain CDO28_RS17380 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS17380 IPR029058 Alpha/Beta hydrolase fold CDO28_RS17395 IPR000847 Transcription regulator HTH, LysR CDO28_RS17395 IPR005119 LysR, substrate-binding CDO28_RS17395 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS17400 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS17400 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS17405 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDO28_RS17405 IPR023393 START-like domain CDO28_RS17410 IPR012853 Chloramphenicol phosphotransferase-like CDO28_RS17410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17415 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS17415 IPR012675 Beta-grasp domain CDO28_RS17415 IPR027980 Protein of unknown function DUF4445 CDO28_RS17425 IPR000489 Pterin-binding CDO28_RS17425 IPR011005 Dihydropteroate synthase-like CDO28_RS17430 IPR003171 Methylenetetrahydrofolate reductase CDO28_RS17430 IPR029041 FAD-linked oxidoreductase-like CDO28_RS17435 IPR022026 Methylene-tetrahydrofolate reductase C-terminal CDO28_RS17440 IPR025989 Virulence factor domain CDO28_RS17445 IPR012413 BA14k family CDO28_RS17460 IPR002376 Formyl transferase, N-terminal CDO28_RS17465 IPR012437 Domain of unknown function DUF1638 CDO28_RS17470 IPR012556 Entericidin EcnAB CDO28_RS17475 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CDO28_RS17475 IPR006158 Cobalamin (vitamin B12)-binding domain CDO28_RS17480 IPR010426 Trimethylamine methyltransferase CDO28_RS17490 IPR018711 Domain of unknown function DUF2233 CDO28_RS17495 IPR013559 YheO-like CDO28_RS17500 IPR004839 Aminotransferase, class I/classII CDO28_RS17500 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS17500 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS17500 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS17510 IPR003726 Homocysteine S-methyltransferase CDO28_RS17510 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT CDO28_RS17515 IPR000847 Transcription regulator HTH, LysR CDO28_RS17515 IPR005119 LysR, substrate-binding CDO28_RS17515 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS17520 IPR004370 4-oxalocrotonate tautomerase CDO28_RS17520 IPR014347 Tautomerase/MIF superfamily CDO28_RS17530 IPR010985 Ribbon-helix-helix CDO28_RS17530 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor CDO28_RS17535 IPR003439 ABC transporter-like CDO28_RS17535 IPR003593 AAA+ ATPase domain CDO28_RS17535 IPR005892 Glycine betaine transport ATP-binding subunit CDO28_RS17535 IPR017871 ABC transporter, conserved site CDO28_RS17535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17540 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CDO28_RS17550 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDO28_RS17550 IPR004459 Cobyric acid synthase CobQ CDO28_RS17550 IPR011698 CobB/CobQ-like glutamine amidotransferase CDO28_RS17550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17550 IPR029062 Class I glutamine amidotransferase-like CDO28_RS17555 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS17555 IPR029058 Alpha/Beta hydrolase fold CDO28_RS17560 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS17560 IPR007890 CHASE2 CDO28_RS17560 IPR029787 Nucleotide cyclase CDO28_RS17565 IPR006860 FecR protein CDO28_RS17570 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase CDO28_RS17570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17575 IPR003495 CobW/HypB/UreG domain CDO28_RS17575 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDO28_RS17575 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW CDO28_RS17575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17580 IPR003672 CobN/magnesium chelatase CDO28_RS17580 IPR011953 Cobaltochelatase, CobN subunit CDO28_RS17585 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR CDO28_RS17585 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain CDO28_RS17585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17590 IPR028082 Periplasmic binding protein-like I CDO28_RS17595 IPR005561 ANTAR domain CDO28_RS17595 IPR008327 Signal transduction response regulator, antiterminator CDO28_RS17595 IPR011006 CheY-like superfamily CDO28_RS17595 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS17600 IPR000515 MetI-like domain CDO28_RS17600 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDO28_RS17605 IPR000515 MetI-like domain CDO28_RS17610 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS17610 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CDO28_RS17610 IPR030678 CDO28_RS17610 CDO28_RS17615 IPR004304 Acetamidase/Formamidase CDO28_RS17620 IPR003439 ABC transporter-like CDO28_RS17620 IPR003593 AAA+ ATPase domain CDO28_RS17620 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS17620 IPR017871 ABC transporter, conserved site CDO28_RS17620 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17625 IPR002781 Transmembrane protein TauE like CDO28_RS17630 IPR002750 CobE/GbiG C-terminal domain CDO28_RS17635 IPR000878 Tetrapyrrole methylase CDO28_RS17635 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CDO28_RS17635 IPR006366 Uroporphyrin-III C-methyltransferase CDO28_RS17635 IPR014776 Tetrapyrrole methylase, subdomain 2 CDO28_RS17635 IPR014777 Tetrapyrrole methylase, subdomain 1 CDO28_RS17640 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDO28_RS17640 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA CDO28_RS17640 IPR011698 CobB/CobQ-like glutamine amidotransferase CDO28_RS17640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17640 IPR029062 Class I glutamine amidotransferase-like CDO28_RS17645 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CDO28_RS17645 IPR004839 Aminotransferase, class I/classII CDO28_RS17645 IPR005860 L-threonine-O-3-phosphate decarboxylase CDO28_RS17645 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS17645 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS17645 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS17650 IPR004485 Cobalamin biosynthesis CobD/CbiB CDO28_RS17655 IPR006162 Phosphopantetheine attachment site CDO28_RS17655 IPR009081 Acyl carrier protein-like CDO28_RS17660 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CDO28_RS17660 IPR029069 HotDog domain CDO28_RS17665 IPR014030 Beta-ketoacyl synthase, N-terminal CDO28_RS17665 IPR016039 Thiolase-like CDO28_RS17670 IPR014030 Beta-ketoacyl synthase, N-terminal CDO28_RS17670 IPR014031 Beta-ketoacyl synthase, C-terminal CDO28_RS17670 IPR016039 Thiolase-like CDO28_RS17670 IPR018201 Beta-ketoacyl synthase, active site CDO28_RS17670 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDO28_RS17675 IPR011032 GroES (chaperonin 10)-like CDO28_RS17675 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS17675 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS17675 IPR016040 NAD(P)-binding domain CDO28_RS17675 IPR020843 Polyketide synthase, enoylreductase CDO28_RS17680 IPR004960 Bacterial lipid A biosynthesis acyltransferase CDO28_RS17690 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS17690 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS17695 IPR023393 START-like domain CDO28_RS17700 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS17705 IPR001463 Sodium:alanine symporter CDO28_RS17710 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating CDO28_RS17710 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CDO28_RS17710 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDO28_RS17710 IPR006183 CDO28_RS17710 CDO28_RS17710 IPR006184 6-phosphogluconate-binding site CDO28_RS17710 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS17710 IPR012284 Fibritin/6-phosphogluconate dehydrogenase, C-terminal extension CDO28_RS17710 IPR013328 Dehydrogenase, multihelical CDO28_RS17710 IPR016040 NAD(P)-binding domain CDO28_RS17720 IPR000843 Transcription regulator HTH, LacI CDO28_RS17720 IPR001761 Periplasmic binding protein/LacI sugar binding domain CDO28_RS17720 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS17720 IPR028082 Periplasmic binding protein-like I CDO28_RS17725 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS17730 IPR000515 MetI-like domain CDO28_RS17735 IPR000515 MetI-like domain CDO28_RS17740 IPR003439 ABC transporter-like CDO28_RS17740 IPR003593 AAA+ ATPase domain CDO28_RS17740 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS17740 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS17740 IPR013611 Transport-associated OB, type 2 CDO28_RS17740 IPR017871 ABC transporter, conserved site CDO28_RS17740 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17745 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CDO28_RS17745 IPR008979 Galactose-binding domain-like CDO28_RS17745 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS17745 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain CDO28_RS17745 IPR017853 Glycoside hydrolase, superfamily CDO28_RS17750 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS17755 IPR000683 Oxidoreductase, N-terminal CDO28_RS17755 IPR016040 NAD(P)-binding domain CDO28_RS17760 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS17765 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS17765 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDO28_RS17765 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like CDO28_RS17775 IPR001584 Integrase, catalytic core CDO28_RS17775 IPR009057 Homeodomain-like CDO28_RS17775 IPR012337 Ribonuclease H-like domain CDO28_RS17780 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS17785 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS17790 IPR006710 Glycoside hydrolase, family 43 CDO28_RS17790 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CDO28_RS17790 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CDO28_RS17795 IPR024572 Protein of unknown function DUF3315 CDO28_RS17800 IPR006127 Periplasmic solute binding protein family CDO28_RS17805 IPR003439 ABC transporter-like CDO28_RS17805 IPR003593 AAA+ ATPase domain CDO28_RS17805 IPR017871 ABC transporter, conserved site CDO28_RS17805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS17810 IPR001626 ABC-3 CDO28_RS17810 IPR029022 ABC transporter, BtuC-like CDO28_RS17815 IPR002481 Ferric-uptake regulator CDO28_RS17815 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS17820 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS17820 IPR011004 Trimeric LpxA-like CDO28_RS17825 IPR011234 Fumarylacetoacetase, C-terminal-related CDO28_RS17835 IPR010385 Protein of unknown function DUF982 CDO28_RS17850 IPR008119 Dense granule Gra6 protein CDO28_RS17855 IPR001207 Transposase, mutator type CDO28_RS17865 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS17865 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS17875 IPR002220 DapA-like CDO28_RS17875 IPR013785 Aldolase-type TIM barrel CDO28_RS17880 IPR000524 Transcription regulator HTH, GntR CDO28_RS17880 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS17880 IPR011711 GntR, C-terminal CDO28_RS17880 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS17920 IPR009057 Homeodomain-like CDO28_RS17925 IPR010921 Trp repressor/replication initiator CDO28_RS17930 IPR025948 HTH-like domain CDO28_RS17935 IPR004291 Transposase, IS66 CDO28_RS17935 IPR024463 Transposase TnpC, homeodomain CDO28_RS17935 IPR024474 Zinc-finger binding domain of transposase IS66 CDO28_RS17940 IPR008878 Transposase IS66, Orf2 CDO28_RS17950 IPR002104 Integrase, catalytic CDO28_RS17950 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS17950 IPR013762 Integrase-like, catalytic core CDO28_RS17955 IPR002104 Integrase, catalytic CDO28_RS17955 IPR004107 Integrase, SAM-like, N-terminal CDO28_RS17955 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS17955 IPR013762 Integrase-like, catalytic core CDO28_RS17955 IPR023109 Integrase/recombinase, N-terminal CDO28_RS17960 IPR008878 Transposase IS66, Orf2 CDO28_RS17970 IPR006119 Resolvase, N-terminal CDO28_RS17970 IPR011109 Recombinase CDO28_RS17970 IPR025827 Recombinase zinc beta ribbon domain CDO28_RS17995 IPR012336 Thioredoxin-like fold CDO28_RS17995 IPR013766 Thioredoxin domain CDO28_RS17995 IPR017937 Thioredoxin, conserved site CDO28_RS18000 IPR012336 Thioredoxin-like fold CDO28_RS18000 IPR013766 Thioredoxin domain CDO28_RS18000 IPR017937 Thioredoxin, conserved site CDO28_RS18010 IPR000394 RNA polymerase sigma factor 54 CDO28_RS18010 IPR007046 RNA polymerase sigma factor 54, core-binding CDO28_RS18010 IPR007634 RNA polymerase sigma factor 54, DNA-binding CDO28_RS18015 IPR000595 Cyclic nucleotide-binding domain CDO28_RS18015 IPR014710 RmlC-like jelly roll fold CDO28_RS18015 IPR018490 Cyclic nucleotide-binding-like CDO28_RS18035 IPR012336 Thioredoxin-like fold CDO28_RS18095 IPR002514 Transposase IS3/IS911family CDO28_RS18095 IPR009057 Homeodomain-like CDO28_RS18095 IPR010921 Trp repressor/replication initiator CDO28_RS18105 IPR001207 Transposase, mutator type CDO28_RS18110 IPR002489 Glutamate synthase, alpha subunit, C-terminal CDO28_RS18110 IPR002932 Glutamate synthase domain CDO28_RS18110 IPR006982 Glutamate synthase, central-N CDO28_RS18110 IPR013785 Aldolase-type TIM barrel CDO28_RS18110 IPR017932 Glutamine amidotransferase type 2 domain CDO28_RS18110 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS18120 IPR001637 Glutamine synthetase class-I, adenylation site CDO28_RS18120 IPR004809 Glutamine synthetase type I CDO28_RS18120 IPR008146 Glutamine synthetase, catalytic domain CDO28_RS18120 IPR008147 Glutamine synthetase, beta-Grasp CDO28_RS18120 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDO28_RS18120 IPR027303 Glutamine synthetase, glycine-rich site CDO28_RS18125 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDO28_RS18125 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS18130 IPR000873 AMP-dependent synthetase/ligase CDO28_RS18130 IPR003679 Aminoglycoside 3-N-acetyltransferase CDO28_RS18130 IPR020845 AMP-binding, conserved site CDO28_RS18130 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS18135 IPR007803 Arginine/Asparagine/Proline hydroxylase CDO28_RS18135 IPR008035 L-proline 3-hydroxylase, C-terminal CDO28_RS18135 IPR027443 Isopenicillin N synthase-like CDO28_RS18140 IPR006035 Ureohydrolase CDO28_RS18140 IPR023696 Ureohydrolase domain CDO28_RS18145 IPR001048 Aspartate/glutamate/uridylate kinase CDO28_RS18145 IPR001057 Glutamate/acetylglutamate kinase CDO28_RS18145 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CDO28_RS18145 IPR011529 Glutamate 5-kinase CDO28_RS18150 IPR012337 Ribonuclease H-like domain CDO28_RS18155 IPR002514 Transposase IS3/IS911family CDO28_RS18155 IPR009057 Homeodomain-like CDO28_RS18155 IPR010921 Trp repressor/replication initiator CDO28_RS18165 IPR008878 Transposase IS66, Orf2 CDO28_RS18170 IPR004291 Transposase, IS66 CDO28_RS18170 IPR024463 Transposase TnpC, homeodomain CDO28_RS18170 IPR024474 Zinc-finger binding domain of transposase IS66 CDO28_RS18185 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS18195 IPR002514 Transposase IS3/IS911family CDO28_RS18195 IPR010921 Trp repressor/replication initiator CDO28_RS18195 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS18200 IPR008878 Transposase IS66, Orf2 CDO28_RS18215 IPR001466 Beta-lactamase-related CDO28_RS18215 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS18220 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS18220 IPR030678 CDO28_RS18220 CDO28_RS18225 IPR008257 Renal dipeptidase family CDO28_RS18225 IPR032466 CDO28_RS18225 CDO28_RS18230 IPR001207 Transposase, mutator type CDO28_RS18245 IPR008878 Transposase IS66, Orf2 CDO28_RS18250 IPR002514 Transposase IS3/IS911family CDO28_RS18250 IPR010921 Trp repressor/replication initiator CDO28_RS18250 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS18255 IPR001207 Transposase, mutator type CDO28_RS18260 IPR000515 MetI-like domain CDO28_RS18265 IPR000515 MetI-like domain CDO28_RS18270 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS18270 IPR030678 CDO28_RS18270 CDO28_RS18275 IPR003439 ABC transporter-like CDO28_RS18275 IPR003593 AAA+ ATPase domain CDO28_RS18275 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS18275 IPR017871 ABC transporter, conserved site CDO28_RS18275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS18285 IPR006076 FAD dependent oxidoreductase CDO28_RS18285 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS18295 IPR020518 Transcription regulator PrtN CDO28_RS18310 IPR007948 Protein of unknown function DUF736 CDO28_RS18315 IPR022205 Protein of unknown function DUF3732 CDO28_RS18315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS18335 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS18335 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS18340 IPR018754 Protein of unknown function DUF2285 CDO28_RS18350 IPR018754 Protein of unknown function DUF2285 CDO28_RS18355 IPR009061 DNA binding domain, putative CDO28_RS18355 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS18360 IPR018777 Replication initiator protein A CDO28_RS18365 IPR021263 Protein of unknown function DUF2840 CDO28_RS18370 IPR015927 Peptidase S24/S26A/S26B/S26C CDO28_RS18370 IPR019533 Peptidase S26 CDO28_RS18370 IPR028360 Peptidase S24/S26, beta-ribbon domain CDO28_RS18375 IPR007948 Protein of unknown function DUF736 CDO28_RS18380 IPR008258 Lytic transglycosylase-like SLT domain CDO28_RS18380 IPR023346 Lysozyme-like domain CDO28_RS18385 IPR021795 Protein of unknown function DUF3363 CDO28_RS18390 IPR003688 Ti-type conjugative transfer system, TraG-like CDO28_RS18390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS18400 IPR018959 Domain of unknown function DUF1989 CDO28_RS18405 IPR000089 Biotin/lipoyl attachment CDO28_RS18405 IPR001882 Biotin-binding site CDO28_RS18405 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDO28_RS18405 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CDO28_RS18405 IPR005482 Biotin carboxylase, C-terminal CDO28_RS18405 IPR011053 Single hybrid motif CDO28_RS18405 IPR011054 Rudiment single hybrid motif CDO28_RS18405 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS18405 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS18405 IPR016185 Pre-ATP-grasp domain CDO28_RS18410 IPR003778 Allophanate hydrolase subunit 2 CDO28_RS18410 IPR003833 Allophanate hydrolase subunit 1 CDO28_RS18410 IPR024946 Arginine repressor C-terminal-like domain CDO28_RS18410 IPR029000 Cyclophilin-like domain CDO28_RS18415 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CDO28_RS18415 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS18420 IPR000524 Transcription regulator HTH, GntR CDO28_RS18420 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS18420 IPR011711 GntR, C-terminal CDO28_RS18420 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS18425 IPR000847 Transcription regulator HTH, LysR CDO28_RS18425 IPR005119 LysR, substrate-binding CDO28_RS18425 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS18440 IPR001482 Type II secretion system protein E CDO28_RS18440 IPR014149 Conjugative transfer, TrbB CDO28_RS18440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS18445 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CDO28_RS18450 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB CDO28_RS18450 IPR016704 Conjugal transfer, TrbD CDO28_RS18455 IPR003593 AAA+ ATPase domain CDO28_RS18455 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CDO28_RS18455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS18460 IPR014147 Type IV conjugative transfer protein TrbJ CDO28_RS18465 IPR027587 Conjugative transfer region protein TrbK CDO28_RS18470 IPR007688 Conjugal transfer, TrbL/VirB6 CDO28_RS18470 IPR014150 Conjugal transfer, TrbL CDO28_RS18475 IPR007430 Bacterial virulence protein VirB8 CDO28_RS18475 IPR032710 CDO28_RS18475 CDO28_RS18480 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CDO28_RS18480 IPR014142 P-type conjugative transfer protein TrbG CDO28_RS18485 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CDO28_RS18490 IPR018733 Protein of unknown function DUF2274 CDO28_RS18505 IPR020358 Uncharacterised protein family Y4oB CDO28_RS18505 IPR024467 Domain of unknown function DUF2384 CDO28_RS18520 IPR020232 Uncharacterised protein family, Y4jG, transmembrane CDO28_RS18520 IPR028090 JAB domain, prokaryotic CDO28_RS18525 IPR000594 UBA/THIF-type NAD/FAD binding fold CDO28_RS18525 IPR016040 NAD(P)-binding domain CDO28_RS18525 IPR025221 E1 N-terminal domain CDO28_RS18535 IPR014016 UvrD-like Helicase, ATP-binding domain CDO28_RS18535 IPR014017 DNA helicase, UvrD-like, C-terminal CDO28_RS18535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS18545 IPR001650 Helicase, C-terminal CDO28_RS18545 IPR011545 DEAD/DEAH box helicase domain CDO28_RS18545 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS18545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS18550 IPR025159 Domain of unknown function DUF4095 CDO28_RS18555 IPR014942 Protein of unknown function DUF1814 CDO28_RS18560 IPR002104 Integrase, catalytic CDO28_RS18560 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS18560 IPR013762 Integrase-like, catalytic core CDO28_RS18565 IPR001269 tRNA-dihydrouridine synthase CDO28_RS18565 IPR004653 tRNA-dihydrouridine synthase, TIM-barrel, YjbN CDO28_RS18565 IPR013785 Aldolase-type TIM barrel CDO28_RS18565 IPR018517 tRNA-dihydrouridine synthase, conserved site CDO28_RS18570 IPR002059 Cold-shock protein, DNA-binding CDO28_RS18570 IPR011129 Cold shock protein CDO28_RS18570 IPR012156 Cold shock, CspA CDO28_RS18570 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS18570 IPR019844 Cold-shock conserved site CDO28_RS18585 IPR001623 DnaJ domain CDO28_RS18595 IPR001650 Helicase, C-terminal CDO28_RS18595 IPR001943 UVR domain CDO28_RS18595 IPR004807 UvrABC system, subunit B CDO28_RS18595 IPR006935 Helicase/UvrB domain CDO28_RS18595 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS18595 IPR024759 UvrB, YAD/RRR-motif-containing domain CDO28_RS18595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS18600 IPR007437 Protein of unknown function DUF486 CDO28_RS18610 IPR006683 Thioesterase superfamily CDO28_RS18610 IPR029069 HotDog domain CDO28_RS18615 IPR003660 HAMP linker domain CDO28_RS18615 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDO28_RS18615 IPR004090 Chemotaxis methyl-accepting receptor CDO28_RS18615 IPR033480 CDO28_RS18615 CDO28_RS18620 IPR002350 Kazal domain CDO28_RS18625 IPR009683 Extensin-like, C-terminal CDO28_RS18630 IPR016040 NAD(P)-binding domain CDO28_RS18630 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDO28_RS18635 IPR005119 LysR, substrate-binding CDO28_RS18640 IPR010985 Ribbon-helix-helix CDO28_RS18640 IPR014795 Vibrio phage ICP1, Orf50 CDO28_RS18645 IPR000182 GNAT domain CDO28_RS18645 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS18650 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS18650 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS18655 IPR003439 ABC transporter-like CDO28_RS18655 IPR003593 AAA+ ATPase domain CDO28_RS18655 IPR017871 ABC transporter, conserved site CDO28_RS18655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS18660 IPR000412 ABC-2 transporter CDO28_RS18660 IPR013525 ABC-2 type transporter CDO28_RS18665 IPR001969 Aspartic peptidase, active site CDO28_RS18665 IPR011969 Peptidase aspartic, CHP02281 CDO28_RS18665 IPR021109 Aspartic peptidase domain CDO28_RS18670 IPR010710 Protein of unknown function DUF1289 CDO28_RS18675 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase CDO28_RS18680 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like CDO28_RS18680 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic CDO28_RS18680 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal CDO28_RS18685 IPR000829 Diacylglycerol kinase, prokaryotic CDO28_RS18690 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS18690 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS18690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS18695 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CDO28_RS18700 IPR005122 Uracil-DNA glycosylase-like CDO28_RS18705 IPR000485 AsnC-type HTH domain CDO28_RS18705 IPR011008 Dimeric alpha-beta barrel CDO28_RS18705 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS18705 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDO28_RS18705 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS18705 IPR019888 Transcription regulator AsnC-type CDO28_RS18710 IPR014825 DNA alkylation repair enzyme CDO28_RS18710 IPR016024 Armadillo-type fold CDO28_RS18715 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CDO28_RS18715 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDO28_RS18715 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS18715 IPR013328 Dehydrogenase, multihelical CDO28_RS18715 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CDO28_RS18715 IPR016040 NAD(P)-binding domain CDO28_RS18715 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDO28_RS18720 IPR011990 Tetratricopeptide-like helical domain CDO28_RS18720 IPR013105 Tetratricopeptide TPR2 CDO28_RS18720 IPR019734 Tetratricopeptide repeat CDO28_RS18720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS18725 IPR014470 Uncharacterised conserved protein UCP01500 CDO28_RS18730 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS18730 IPR016040 NAD(P)-binding domain CDO28_RS18735 IPR009354 Usg-like CDO28_RS18740 IPR000515 MetI-like domain CDO28_RS18740 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS18745 IPR000515 MetI-like domain CDO28_RS18745 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS18750 IPR001320 Ionotropic glutamate receptor CDO28_RS18750 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS18750 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein CDO28_RS18750 IPR018313 Extracellular solute-binding protein, family 3, conserved site CDO28_RS18760 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CDO28_RS18765 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain CDO28_RS18765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS18770 IPR013482 Molybdenum cofactor guanylyltransferase CDO28_RS18770 IPR025877 MobA-like NTP transferase domain CDO28_RS18770 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS18775 IPR000620 Drug/metabolite transporter CDO28_RS18780 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CDO28_RS18780 IPR006638 Elongator protein 3/MiaB/NifB CDO28_RS18780 IPR007197 Radical SAM CDO28_RS18780 IPR010505 Molybdenum cofactor synthesis C-terminal CDO28_RS18780 IPR013483 Molybdenum cofactor biosynthesis protein A CDO28_RS18780 IPR013785 Aldolase-type TIM barrel CDO28_RS18785 IPR010376 Domain of unknown function, DUF971 CDO28_RS18790 IPR000835 MarR-type HTH domain CDO28_RS18790 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS18790 IPR023187 Transcriptional regulator MarR-type, conserved site CDO28_RS18795 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS18795 IPR029058 Alpha/Beta hydrolase fold CDO28_RS18800 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain CDO28_RS18800 IPR012349 FMN-binding split barrel CDO28_RS18800 IPR024029 Pyridoxamine 5-phosphate oxidase, FMN-dependent CDO28_RS18805 IPR000362 Fumarate lyase family CDO28_RS18805 IPR005677 Fumarate hydratase, class II CDO28_RS18805 IPR008948 L-Aspartase-like CDO28_RS18805 IPR018951 Fumarase C, C-terminal CDO28_RS18805 IPR020557 Fumarate lyase, conserved site CDO28_RS18805 IPR022761 Fumarate lyase, N-terminal CDO28_RS18805 IPR024083 Fumarase/histidase, N-terminal CDO28_RS18810 IPR002477 Peptidoglycan binding-like CDO28_RS18810 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS18815 IPR006346 2-phosphoglycolate phosphatase, prokaryotic CDO28_RS18815 IPR006439 HAD hydrolase, subfamily IA CDO28_RS18815 IPR023198 Phosphoglycolate phosphatase, domain 2 CDO28_RS18815 IPR023214 HAD-like domain CDO28_RS18820 IPR004788 Ribose 5-phosphate isomerase, type A CDO28_RS18820 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CDO28_RS18825 IPR018637 Domain of unknown function DUF2059 CDO28_RS18830 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS18830 IPR006324 Glutathione-disulphide reductase CDO28_RS18830 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDO28_RS18830 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS18830 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS18835 IPR002480 DAHP synthetase, class II CDO28_RS18840 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS18840 IPR011057 Mss4-like CDO28_RS18850 IPR018705 Domain of unknown function DUF2134, membrane CDO28_RS18865 IPR000209 Peptidase S8/S53 domain CDO28_RS18865 IPR015500 Peptidase S8, subtilisin-related CDO28_RS18865 IPR022398 Peptidase S8, subtilisin, His-active site CDO28_RS18865 IPR023827 Peptidase S8, subtilisin, Asp-active site CDO28_RS18865 IPR023828 Peptidase S8, subtilisin, Ser-active site CDO28_RS18880 IPR001264 Glycosyl transferase, family 51 CDO28_RS18880 IPR001460 Penicillin-binding protein, transpeptidase CDO28_RS18880 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS18880 IPR012413 BA14k family CDO28_RS18880 IPR023346 Lysozyme-like domain CDO28_RS18885 IPR021327 Protein of unknown function DUF2934 CDO28_RS18905 IPR009962 Protein of unknown function DUF1488 CDO28_RS18920 IPR004680 Citrate transporter-like domain CDO28_RS18920 IPR006037 Regulator of K+ conductance, C-terminal CDO28_RS18955 IPR005119 LysR, substrate-binding CDO28_RS18960 IPR000835 MarR-type HTH domain CDO28_RS18960 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS18965 IPR002938 Monooxygenase, FAD-binding CDO28_RS18965 IPR012336 Thioredoxin-like fold CDO28_RS18965 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS18975 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDO28_RS18975 IPR023393 START-like domain CDO28_RS18980 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS18980 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS18990 IPR032808 CDO28_RS18990 CDO28_RS18995 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS18995 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS19000 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDO28_RS19000 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDO28_RS19000 IPR016166 FAD-binding, type 2 CDO28_RS19000 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS19000 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS19005 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS19005 IPR002888 [2Fe-2S]-binding CDO28_RS19005 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS19005 IPR012675 Beta-grasp domain CDO28_RS19010 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS19010 IPR009057 Homeodomain-like CDO28_RS19010 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS19010 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDO28_RS19020 IPR014914 RES CDO28_RS19035 IPR005064 Bordetella uptake gene CDO28_RS19040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS19050 IPR005119 LysR, substrate-binding CDO28_RS19055 IPR000847 Transcription regulator HTH, LysR CDO28_RS19055 IPR005119 LysR, substrate-binding CDO28_RS19055 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19060 IPR005025 NADPH-dependent FMN reductase-like CDO28_RS19060 IPR010089 Flavoprotein WrbA CDO28_RS19060 IPR029039 Flavoprotein-like CDO28_RS19065 IPR011701 Major facilitator superfamily CDO28_RS19065 IPR020846 Major facilitator superfamily domain CDO28_RS19070 IPR002938 Monooxygenase, FAD-binding CDO28_RS19070 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS19075 IPR000847 Transcription regulator HTH, LysR CDO28_RS19075 IPR005119 LysR, substrate-binding CDO28_RS19075 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19080 IPR000620 Drug/metabolite transporter CDO28_RS19090 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19090 IPR012318 Helix-turn-helix motif, Crp-type CDO28_RS19090 IPR014710 RmlC-like jelly roll fold CDO28_RS19090 IPR018490 Cyclic nucleotide-binding-like CDO28_RS19095 IPR010621 Domain of unknown function DUF1214 CDO28_RS19095 IPR010679 Domain of unknown function DUF1254 CDO28_RS19095 IPR023289 VPA0735-like domain CDO28_RS19105 IPR019207 Protein of unknown function DUF2092, periplasmic CDO28_RS19105 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDO28_RS19115 IPR011990 Tetratricopeptide-like helical domain CDO28_RS19120 IPR010297 Protein of unknown function DUF900, hydrolase-like CDO28_RS19120 IPR014586 Uncharacterised conserved protein UCP033909 CDO28_RS19120 IPR029058 Alpha/Beta hydrolase fold CDO28_RS19130 IPR012332 P22 tailspike C-terminal domain-like CDO28_RS19130 IPR013425 Autotransporter-associated beta strand repeat CDO28_RS19135 IPR001633 EAL domain CDO28_RS19140 IPR010642 Invasion protein B CDO28_RS19145 IPR005546 Autotransporter beta-domain CDO28_RS19145 IPR006315 Outer membrane autotransporter barrel CDO28_RS19145 IPR011050 Pectin lyase fold/virulence factor CDO28_RS19145 IPR012332 P22 tailspike C-terminal domain-like CDO28_RS19145 IPR013425 Autotransporter-associated beta strand repeat CDO28_RS19150 IPR011990 Tetratricopeptide-like helical domain CDO28_RS19155 IPR000871 Beta-lactamase, class-A/D CDO28_RS19155 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS19160 IPR000847 Transcription regulator HTH, LysR CDO28_RS19160 IPR005119 LysR, substrate-binding CDO28_RS19160 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19170 IPR000847 Transcription regulator HTH, LysR CDO28_RS19170 IPR005119 LysR, substrate-binding CDO28_RS19170 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19175 IPR016040 NAD(P)-binding domain CDO28_RS19180 IPR011701 Major facilitator superfamily CDO28_RS19180 IPR020846 Major facilitator superfamily domain CDO28_RS19185 IPR002577 Helix-turn-helix, HxlR type CDO28_RS19185 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19190 IPR010126 Esterase, PHB depolymerase CDO28_RS19190 IPR029058 Alpha/Beta hydrolase fold CDO28_RS19195 IPR007213 Leucine carboxyl methyltransferase CDO28_RS19195 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP CDO28_RS19195 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS19205 IPR000847 Transcription regulator HTH, LysR CDO28_RS19205 IPR005119 LysR, substrate-binding CDO28_RS19205 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19210 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS19210 IPR016040 NAD(P)-binding domain CDO28_RS19215 IPR002818 ThiJ/PfpI CDO28_RS19215 IPR029062 Class I glutamine amidotransferase-like CDO28_RS19220 IPR029062 Class I glutamine amidotransferase-like CDO28_RS19220 IPR032633 CDO28_RS19220 CDO28_RS19225 IPR007138 Antibiotic biosynthesis monooxygenase-like domain CDO28_RS19225 IPR011008 Dimeric alpha-beta barrel CDO28_RS19230 IPR000683 Oxidoreductase, N-terminal CDO28_RS19230 IPR016040 NAD(P)-binding domain CDO28_RS19235 IPR001303 Class II aldolase/adducin N-terminal CDO28_RS19240 IPR006328 Haloacid dehalogenase, type II CDO28_RS19240 IPR006439 HAD hydrolase, subfamily IA CDO28_RS19240 IPR023214 HAD-like domain CDO28_RS19245 IPR000847 Transcription regulator HTH, LysR CDO28_RS19245 IPR005119 LysR, substrate-binding CDO28_RS19245 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19255 IPR016040 NAD(P)-binding domain CDO28_RS19260 IPR000847 Transcription regulator HTH, LysR CDO28_RS19260 IPR005119 LysR, substrate-binding CDO28_RS19260 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19265 IPR010093 Excisionase/Xis, DNA-binding CDO28_RS19275 IPR013830 CDO28_RS19275 CDO28_RS19280 IPR001851 ABC transporter, permease CDO28_RS19285 IPR001851 ABC transporter, permease CDO28_RS19290 IPR003439 ABC transporter-like CDO28_RS19290 IPR003593 AAA+ ATPase domain CDO28_RS19290 IPR017871 ABC transporter, conserved site CDO28_RS19290 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS19295 IPR025997 Periplasmic binding protein domain CDO28_RS19295 IPR028082 Periplasmic binding protein-like I CDO28_RS19300 IPR013830 CDO28_RS19300 CDO28_RS19305 IPR000600 ROK CDO28_RS19305 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19310 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS19310 IPR029787 Nucleotide cyclase CDO28_RS19315 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS19315 IPR009057 Homeodomain-like CDO28_RS19315 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS19315 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS19320 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS19320 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS19330 IPR025202 Phospholipase D-like domain CDO28_RS19335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS19340 IPR002577 Helix-turn-helix, HxlR type CDO28_RS19340 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19345 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS19345 IPR000639 Epoxide hydrolase-like CDO28_RS19345 IPR029058 Alpha/Beta hydrolase fold CDO28_RS19355 IPR000944 Transcription regulator Rrf2-like CDO28_RS19355 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19360 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CDO28_RS19360 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS19370 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS19370 IPR029787 Nucleotide cyclase CDO28_RS19375 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS19375 IPR009057 Homeodomain-like CDO28_RS19375 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS19375 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS19375 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDO28_RS19380 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS19380 IPR029058 Alpha/Beta hydrolase fold CDO28_RS19390 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS19390 IPR000639 Epoxide hydrolase-like CDO28_RS19390 IPR029058 Alpha/Beta hydrolase fold CDO28_RS19395 IPR000944 Transcription regulator Rrf2-like CDO28_RS19395 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19400 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS19400 IPR001221 Phenol hydroxylase reductase CDO28_RS19400 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDO28_RS19400 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS19400 IPR008333 Oxidoreductase, FAD-binding domain CDO28_RS19400 IPR012675 Beta-grasp domain CDO28_RS19400 IPR017938 Riboflavin synthase-like beta-barrel CDO28_RS19405 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit CDO28_RS19405 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain CDO28_RS19405 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site CDO28_RS19405 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS19410 IPR000847 Transcription regulator HTH, LysR CDO28_RS19410 IPR005119 LysR, substrate-binding CDO28_RS19410 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19415 IPR009057 Homeodomain-like CDO28_RS19415 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS19415 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS19420 IPR014757 Transcription regulator IclR, C-terminal CDO28_RS19420 IPR029016 GAF domain-like CDO28_RS19430 IPR016130 Protein-tyrosine phosphatase, active site CDO28_RS19430 IPR026893 Tyrosine/serine-protein phosphatase IphP-type CDO28_RS19430 IPR029021 Protein-tyrosine phosphatase-like CDO28_RS19435 IPR009945 Protein of unknown function DUF1476 CDO28_RS19440 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS19440 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS19445 IPR002933 Peptidase M20 CDO28_RS19445 IPR010158 Amidase, hydantoinase/carbamoylase CDO28_RS19445 IPR011650 Peptidase M20, dimerisation domain CDO28_RS19450 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase CDO28_RS19455 IPR015942 Asp/Glu/hydantoin racemase CDO28_RS19455 IPR026286 Maleate isomerase/Arylmalonate decarboxylase CDO28_RS19460 IPR000847 Transcription regulator HTH, LysR CDO28_RS19460 IPR005119 LysR, substrate-binding CDO28_RS19460 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19470 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CDO28_RS19470 IPR012675 Beta-grasp domain CDO28_RS19470 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDO28_RS19475 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS19475 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS19480 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS19480 IPR002888 [2Fe-2S]-binding CDO28_RS19480 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS19480 IPR012675 Beta-grasp domain CDO28_RS19485 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDO28_RS19485 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDO28_RS19485 IPR016166 FAD-binding, type 2 CDO28_RS19485 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS19485 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS19500 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel CDO28_RS19500 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha CDO28_RS19500 IPR006249 Aconitate/iron regulatory protein 2 CDO28_RS19500 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDO28_RS19500 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CDO28_RS19500 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 CDO28_RS19500 IPR018136 Aconitase family, 4Fe-4S cluster binding site CDO28_RS19505 IPR000524 Transcription regulator HTH, GntR CDO28_RS19505 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS19505 IPR011711 GntR, C-terminal CDO28_RS19505 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19510 IPR002823 Protein of unknown function DUF112, transmembrane CDO28_RS19515 IPR009936 Protein of unknown function DUF1468 CDO28_RS19520 IPR005064 Bordetella uptake gene CDO28_RS19525 IPR003812 Fido domain CDO28_RS19525 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19525 IPR025758 Fic/DOC N-terminal CDO28_RS19525 IPR026287 Adenosine monophosphate-protein transferase CDO28_RS19535 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS19540 IPR000182 GNAT domain CDO28_RS19540 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS19545 IPR010093 Excisionase/Xis, DNA-binding CDO28_RS19565 IPR000847 Transcription regulator HTH, LysR CDO28_RS19565 IPR005119 LysR, substrate-binding CDO28_RS19565 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19570 IPR011701 Major facilitator superfamily CDO28_RS19570 IPR020846 Major facilitator superfamily domain CDO28_RS19580 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS19580 IPR029058 Alpha/Beta hydrolase fold CDO28_RS19585 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS19585 IPR016040 NAD(P)-binding domain CDO28_RS19585 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS19590 IPR003779 Carboxymuconolactone decarboxylase-like CDO28_RS19590 IPR029032 AhpD-like CDO28_RS19595 IPR011051 RmlC-like cupin domain CDO28_RS19595 IPR013096 Cupin 2, conserved barrel CDO28_RS19595 IPR014710 RmlC-like jelly roll fold CDO28_RS19605 IPR000639 Epoxide hydrolase-like CDO28_RS19605 IPR010497 Epoxide hydrolase, N-terminal CDO28_RS19605 IPR016292 Epoxide hydrolase CDO28_RS19605 IPR029058 Alpha/Beta hydrolase fold CDO28_RS19610 IPR021445 Protein of unknown function DUF3095 CDO28_RS19615 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS19615 IPR000639 Epoxide hydrolase-like CDO28_RS19615 IPR029058 Alpha/Beta hydrolase fold CDO28_RS19620 IPR032033 CDO28_RS19620 CDO28_RS19625 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS19625 IPR003593 AAA+ ATPase domain CDO28_RS19625 IPR011990 Tetratricopeptide-like helical domain CDO28_RS19625 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19625 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS19625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS19630 IPR000639 Epoxide hydrolase-like CDO28_RS19630 IPR010497 Epoxide hydrolase, N-terminal CDO28_RS19630 IPR016292 Epoxide hydrolase CDO28_RS19630 IPR029058 Alpha/Beta hydrolase fold CDO28_RS19635 IPR003718 OsmC/Ohr family CDO28_RS19635 IPR015946 K homology domain-like, alpha/beta CDO28_RS19635 IPR019953 Organic hydroperoxide resistance protein famiy CDO28_RS19640 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS19640 IPR029058 Alpha/Beta hydrolase fold CDO28_RS19650 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CDO28_RS19655 IPR010985 Ribbon-helix-helix CDO28_RS19655 IPR013321 Arc-type ribbon-helix-helix CDO28_RS19655 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor CDO28_RS19660 IPR011111 RepB plasmid partition CDO28_RS19670 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDO28_RS19670 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS19670 IPR016040 NAD(P)-binding domain CDO28_RS19670 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDO28_RS19670 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CDO28_RS19670 IPR033689 CDO28_RS19670 CDO28_RS19680 IPR000847 Transcription regulator HTH, LysR CDO28_RS19680 IPR005119 LysR, substrate-binding CDO28_RS19680 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19685 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS19685 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CDO28_RS19685 IPR030678 CDO28_RS19685 CDO28_RS19690 IPR011051 RmlC-like cupin domain CDO28_RS19690 IPR014710 RmlC-like jelly roll fold CDO28_RS19690 IPR031723 CDO28_RS19690 CDO28_RS19695 IPR000515 MetI-like domain CDO28_RS19700 IPR000515 MetI-like domain CDO28_RS19705 IPR003439 ABC transporter-like CDO28_RS19705 IPR003593 AAA+ ATPase domain CDO28_RS19705 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS19705 IPR017871 ABC transporter, conserved site CDO28_RS19705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS19715 IPR000834 Peptidase M14, carboxypeptidase A CDO28_RS19720 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CDO28_RS19720 IPR011013 Galactose mutarotase-like domain CDO28_RS19720 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CDO28_RS19730 IPR029060 PIN domain-like CDO28_RS19750 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS19755 IPR005532 Formylglycine-generating sulphatase enzyme domain CDO28_RS19755 IPR016187 C-type lectin fold CDO28_RS19760 IPR009057 Homeodomain-like CDO28_RS19760 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS19760 IPR018062 HTH domain AraC-type, conserved site CDO28_RS19760 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS19770 IPR011006 CheY-like superfamily CDO28_RS19775 IPR000847 Transcription regulator HTH, LysR CDO28_RS19775 IPR005119 LysR, substrate-binding CDO28_RS19775 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19780 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CDO28_RS19780 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS19780 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS19780 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS19785 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS19790 IPR000515 MetI-like domain CDO28_RS19790 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS19795 IPR000515 MetI-like domain CDO28_RS19795 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS19800 IPR003439 ABC transporter-like CDO28_RS19800 IPR003593 AAA+ ATPase domain CDO28_RS19800 IPR017871 ABC transporter, conserved site CDO28_RS19800 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS19800 IPR030679 CDO28_RS19800 CDO28_RS19805 IPR000868 Isochorismatase-like CDO28_RS19810 IPR000847 Transcription regulator HTH, LysR CDO28_RS19810 IPR005119 LysR, substrate-binding CDO28_RS19810 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19840 IPR010126 Esterase, PHB depolymerase CDO28_RS19840 IPR029058 Alpha/Beta hydrolase fold CDO28_RS19845 IPR005025 NADPH-dependent FMN reductase-like CDO28_RS19845 IPR014063 Arsenate resistance ArsH CDO28_RS19845 IPR029039 Flavoprotein-like CDO28_RS19850 IPR006659 Arsenate reductase CDO28_RS19850 IPR006660 Arsenate reductase-like CDO28_RS19850 IPR012336 Thioredoxin-like fold CDO28_RS19855 IPR000425 Major intrinsic protein CDO28_RS19855 IPR023271 Aquaporin-like CDO28_RS19860 IPR023485 Phosphotyrosine protein phosphatase I superfamily CDO28_RS19865 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS19865 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19880 IPR008567 3-keto-5-aminohexanoate cleavage enzyme CDO28_RS19880 IPR013785 Aldolase-type TIM barrel CDO28_RS19885 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CDO28_RS19890 IPR010985 Ribbon-helix-helix CDO28_RS19890 IPR013321 Arc-type ribbon-helix-helix CDO28_RS19890 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor CDO28_RS19895 IPR006680 Amidohydrolase 1 CDO28_RS19895 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS19895 IPR032466 CDO28_RS19895 CDO28_RS19900 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CDO28_RS19905 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS19905 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS19910 IPR001851 ABC transporter, permease CDO28_RS19915 IPR001851 ABC transporter, permease CDO28_RS19920 IPR003439 ABC transporter-like CDO28_RS19920 IPR003593 AAA+ ATPase domain CDO28_RS19920 IPR017871 ABC transporter, conserved site CDO28_RS19920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS19925 IPR003760 Basic membrane lipoprotein CDO28_RS19930 IPR011008 Dimeric alpha-beta barrel CDO28_RS19930 IPR012577 NIPSNAP CDO28_RS19935 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CDO28_RS19935 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CDO28_RS19935 IPR012132 Glucose-methanol-choline oxidoreductase CDO28_RS19935 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS19940 IPR005122 Uracil-DNA glycosylase-like CDO28_RS19945 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS19945 IPR009057 Homeodomain-like CDO28_RS19945 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS19945 IPR013573 Transcription regulator YcdC, C-terminal CDO28_RS19945 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS19955 IPR000262 FMN-dependent dehydrogenase CDO28_RS19955 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CDO28_RS19955 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CDO28_RS19955 IPR013785 Aldolase-type TIM barrel CDO28_RS19960 IPR011009 Protein kinase-like domain CDO28_RS19965 IPR000524 Transcription regulator HTH, GntR CDO28_RS19965 IPR010248 Histidine utilization repressor CDO28_RS19965 IPR011663 UbiC transcription regulator-associated CDO28_RS19965 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS19965 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CDO28_RS19970 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS19970 IPR011032 GroES (chaperonin 10)-like CDO28_RS19970 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS19970 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS19970 IPR016040 NAD(P)-binding domain CDO28_RS19975 IPR001692 Histidinol dehydrogenase, conserved site CDO28_RS19975 IPR012131 Histidinol dehydrogenase CDO28_RS19975 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS19975 IPR022695 Histidinol dehydrogenase, monofunctional CDO28_RS19980 IPR000515 MetI-like domain CDO28_RS19985 IPR000515 MetI-like domain CDO28_RS19990 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CDO28_RS19995 IPR003439 ABC transporter-like CDO28_RS19995 IPR003593 AAA+ ATPase domain CDO28_RS19995 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CDO28_RS19995 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS19995 IPR013611 Transport-associated OB, type 2 CDO28_RS19995 IPR017871 ABC transporter, conserved site CDO28_RS19995 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20000 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS20000 IPR016040 NAD(P)-binding domain CDO28_RS20000 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS20005 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CDO28_RS20005 IPR004839 Aminotransferase, class I/classII CDO28_RS20005 IPR005861 Histidinol-phosphate aminotransferase family CDO28_RS20005 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS20005 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS20005 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS20010 IPR003115 ParB/Sulfiredoxin CDO28_RS20020 IPR009387 Toxin HigB CDO28_RS20025 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS20025 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS20030 IPR003313 AraC-type arabinose-binding/dimerisation domain CDO28_RS20030 IPR009057 Homeodomain-like CDO28_RS20030 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS20030 IPR018062 HTH domain AraC-type, conserved site CDO28_RS20030 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS20030 IPR032783 CDO28_RS20030 CDO28_RS20035 IPR011701 Major facilitator superfamily CDO28_RS20035 IPR020846 Major facilitator superfamily domain CDO28_RS20040 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS20040 IPR003660 HAMP linker domain CDO28_RS20040 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS20040 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS20045 IPR010583 MltA-interacting MipA CDO28_RS20050 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS20050 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS20050 IPR011006 CheY-like superfamily CDO28_RS20050 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20050 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS20055 IPR007318 Phospholipid methyltransferase CDO28_RS20060 IPR001036 Acriflavin resistance protein CDO28_RS20060 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDO28_RS20065 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS20065 IPR032317 CDO28_RS20065 CDO28_RS20070 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS20070 IPR010359 Protein of unknown function DUF955 CDO28_RS20070 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS20075 IPR016541 Uncharacterised conserved protein UCP008505 CDO28_RS20080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20105 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS20110 IPR011989 Armadillo-like helical CDO28_RS20110 IPR016024 Armadillo-type fold CDO28_RS20115 IPR004028 Retroviral Gag polyprotein, M CDO28_RS20115 IPR004291 Transposase, IS66 CDO28_RS20120 IPR013597 Group II intron, maturase-specific CDO28_RS20130 IPR029069 HotDog domain CDO28_RS20135 IPR001227 Acyl transferase domain CDO28_RS20135 IPR009081 Acyl carrier protein-like CDO28_RS20135 IPR013968 Polyketide synthase, KR CDO28_RS20135 IPR014030 Beta-ketoacyl synthase, N-terminal CDO28_RS20135 IPR014031 Beta-ketoacyl synthase, C-terminal CDO28_RS20135 IPR014043 Acyl transferase CDO28_RS20135 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CDO28_RS20135 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CDO28_RS20135 IPR016039 Thiolase-like CDO28_RS20135 IPR016040 NAD(P)-binding domain CDO28_RS20135 IPR018201 Beta-ketoacyl synthase, active site CDO28_RS20135 IPR020801 Polyketide synthase, acyl transferase domain CDO28_RS20135 IPR020807 Polyketide synthase, dehydratase domain CDO28_RS20135 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDO28_RS20135 IPR029069 HotDog domain CDO28_RS20135 IPR032821 CDO28_RS20135 CDO28_RS20145 IPR011519 ASPIC/UnbV CDO28_RS20150 IPR012964 Protein of unknown function DUF1702 CDO28_RS20160 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS20160 IPR005158 Bacterial transcriptional activator domain CDO28_RS20160 IPR011990 Tetratricopeptide-like helical domain CDO28_RS20160 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20160 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS20165 IPR017642 DNA sulphur modification protein DndB CDO28_RS20180 IPR002104 Integrase, catalytic CDO28_RS20180 IPR004107 Integrase, SAM-like, N-terminal CDO28_RS20180 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS20180 IPR013762 Integrase-like, catalytic core CDO28_RS20180 IPR023109 Integrase/recombinase, N-terminal CDO28_RS20185 IPR002104 Integrase, catalytic CDO28_RS20185 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS20185 IPR013762 Integrase-like, catalytic core CDO28_RS20190 IPR002104 Integrase, catalytic CDO28_RS20190 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS20190 IPR013762 Integrase-like, catalytic core CDO28_RS20190 IPR023109 Integrase/recombinase, N-terminal CDO28_RS20210 IPR008878 Transposase IS66, Orf2 CDO28_RS20215 IPR002514 Transposase IS3/IS911family CDO28_RS20215 IPR009057 Homeodomain-like CDO28_RS20215 IPR010921 Trp repressor/replication initiator CDO28_RS20220 IPR014966 FRG domain CDO28_RS20225 IPR002789 Domain of unknown function DUF87 CDO28_RS20225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20240 IPR025669 AAA domain CDO28_RS20240 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20245 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDO28_RS20250 IPR002716 PIN domain CDO28_RS20250 IPR029060 PIN domain-like CDO28_RS20260 IPR002104 Integrase, catalytic CDO28_RS20260 IPR010998 Integrase, Lambda-type, N-terminal CDO28_RS20260 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS20260 IPR013762 Integrase-like, catalytic core CDO28_RS20260 IPR023109 Integrase/recombinase, N-terminal CDO28_RS20275 IPR014942 Protein of unknown function DUF1814 CDO28_RS20285 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS20305 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor CDO28_RS20310 IPR014914 RES CDO28_RS20315 IPR011979 Conserved hypothetical protein CHP02293 CDO28_RS20315 IPR024467 Domain of unknown function DUF2384 CDO28_RS20330 IPR000847 Transcription regulator HTH, LysR CDO28_RS20330 IPR005119 LysR, substrate-binding CDO28_RS20330 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20335 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS20335 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS20340 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDO28_RS20340 IPR013785 Aldolase-type TIM barrel CDO28_RS20345 IPR000847 Transcription regulator HTH, LysR CDO28_RS20345 IPR005119 LysR, substrate-binding CDO28_RS20345 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20350 IPR001264 Glycosyl transferase, family 51 CDO28_RS20350 IPR001460 Penicillin-binding protein, transpeptidase CDO28_RS20350 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS20350 IPR023346 Lysozyme-like domain CDO28_RS20350 IPR031376 CDO28_RS20350 CDO28_RS20360 IPR001460 Penicillin-binding protein, transpeptidase CDO28_RS20360 IPR005311 Penicillin-binding protein, dimerisation domain CDO28_RS20360 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS20370 IPR003646 SH3-like domain, bacterial-type CDO28_RS20375 IPR000160 GGDEF domain CDO28_RS20375 IPR029787 Nucleotide cyclase CDO28_RS20380 IPR000600 ROK CDO28_RS20380 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20390 IPR000515 MetI-like domain CDO28_RS20395 IPR000515 MetI-like domain CDO28_RS20400 IPR003439 ABC transporter-like CDO28_RS20400 IPR003593 AAA+ ATPase domain CDO28_RS20400 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS20400 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS20400 IPR013611 Transport-associated OB, type 2 CDO28_RS20400 IPR017871 ABC transporter, conserved site CDO28_RS20400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20405 IPR000683 Oxidoreductase, N-terminal CDO28_RS20405 IPR016040 NAD(P)-binding domain CDO28_RS20405 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS20410 IPR002934 Nucleotidyl transferase domain CDO28_RS20410 IPR024172 Streptomycin 3''-adenylyltransferase CDO28_RS20410 IPR025184 Domain of unknown function DUF4111 CDO28_RS20415 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS20415 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS20415 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS20415 IPR012336 Thioredoxin-like fold CDO28_RS20425 IPR014016 UvrD-like Helicase, ATP-binding domain CDO28_RS20425 IPR014017 DNA helicase, UvrD-like, C-terminal CDO28_RS20425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20430 IPR013099 Two pore domain potassium channel domain CDO28_RS20435 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS20435 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS20435 IPR011006 CheY-like superfamily CDO28_RS20435 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20440 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS20440 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS20440 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal CDO28_RS20440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS20440 IPR006016 UspA CDO28_RS20440 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS20440 IPR025201 Sensor protein KdpD, transmembrane domain CDO28_RS20440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20440 IPR029016 GAF domain-like CDO28_RS20445 IPR003820 Potassium-transporting ATPase C chain CDO28_RS20450 IPR001757 Cation-transporting P-type ATPase CDO28_RS20450 IPR006391 Potassium-transporting P-type ATPase, B chain, subfamily IA CDO28_RS20450 IPR008250 P-type ATPase, A domain CDO28_RS20450 IPR018303 P-type ATPase, phosphorylation site CDO28_RS20450 IPR023214 HAD-like domain CDO28_RS20450 IPR023299 P-type ATPase, cytoplasmic domain N CDO28_RS20455 IPR004623 Potassium-transporting ATPase A chain CDO28_RS20460 IPR011726 K+ transporting P-type ATPase, F subunit CDO28_RS20470 IPR014090 Siderophore transporter, RhtX/FptX family CDO28_RS20470 IPR020846 Major facilitator superfamily domain CDO28_RS20470 IPR024371 Acetyl-coenzyme A transporter 1 CDO28_RS20475 IPR004637 2,4-diaminobutyrate 4-transaminase CDO28_RS20475 IPR005814 Aminotransferase class-III CDO28_RS20475 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS20475 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS20475 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS20480 IPR002129 Pyridoxal phosphate-dependent decarboxylase CDO28_RS20480 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS20480 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS20480 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS20480 IPR021115 Pyridoxal-phosphate binding site CDO28_RS20485 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CDO28_RS20485 IPR022770 Ferric iron reductase FhuF domain CDO28_RS20490 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS20490 IPR019432 Siderophore biosynthesis protein, conserved domain CDO28_RS20495 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS20495 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase CDO28_RS20495 IPR031043 CDO28_RS20495 CDO28_RS20500 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CDO28_RS20500 IPR022770 Ferric iron reductase FhuF domain CDO28_RS20505 IPR009057 Homeodomain-like CDO28_RS20505 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS20505 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS20510 IPR000531 TonB-dependent receptor, beta-barrel CDO28_RS20510 IPR010105 TonB-dependent siderophore receptor CDO28_RS20510 IPR012910 TonB-dependent receptor, plug CDO28_RS20515 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS20515 IPR019432 Siderophore biosynthesis protein, conserved domain CDO28_RS20520 IPR000847 Transcription regulator HTH, LysR CDO28_RS20520 IPR005119 LysR, substrate-binding CDO28_RS20520 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20525 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS20525 IPR016040 NAD(P)-binding domain CDO28_RS20525 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS20530 IPR009959 Polyketide cyclase SnoaL-like domain CDO28_RS20530 IPR032710 CDO28_RS20530 CDO28_RS20535 IPR020955 Uncharacterised protein family Atu4866 CDO28_RS20540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS20545 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS20545 IPR002888 [2Fe-2S]-binding CDO28_RS20545 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS20545 IPR012675 Beta-grasp domain CDO28_RS20550 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDO28_RS20550 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDO28_RS20550 IPR016166 FAD-binding, type 2 CDO28_RS20550 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS20550 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS20555 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS20555 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS20560 IPR001126 DNA-repair protein, UmuC-like CDO28_RS20560 IPR017961 DNA polymerase, Y-family, little finger domain CDO28_RS20560 IPR022880 DNA polymerase IV CDO28_RS20560 IPR024728 DNA polymerase type-Y, HhH motif CDO28_RS20575 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS20575 IPR029787 Nucleotide cyclase CDO28_RS20580 IPR002781 Transmembrane protein TauE like CDO28_RS20585 IPR003760 Basic membrane lipoprotein CDO28_RS20590 IPR020556 Amidase, conserved site CDO28_RS20590 IPR023631 Amidase signature domain CDO28_RS20595 IPR003439 ABC transporter-like CDO28_RS20595 IPR003593 AAA+ ATPase domain CDO28_RS20595 IPR017871 ABC transporter, conserved site CDO28_RS20595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20600 IPR001851 ABC transporter, permease CDO28_RS20605 IPR001851 ABC transporter, permease CDO28_RS20610 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS20610 IPR013108 Amidohydrolase 3 CDO28_RS20610 IPR032466 CDO28_RS20610 CDO28_RS20615 IPR011051 RmlC-like cupin domain CDO28_RS20615 IPR014710 RmlC-like jelly roll fold CDO28_RS20615 IPR025979 ChrR-like cupin domain CDO28_RS20620 IPR011701 Major facilitator superfamily CDO28_RS20620 IPR020846 Major facilitator superfamily domain CDO28_RS20625 IPR000763 Catalase-peroxidase haem CDO28_RS20625 IPR002016 Haem peroxidase, plant/fungal/bacterial CDO28_RS20625 IPR010255 Haem peroxidase CDO28_RS20625 IPR019793 Peroxidases heam-ligand binding site CDO28_RS20625 IPR019794 Peroxidase, active site CDO28_RS20635 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS20635 IPR009057 Homeodomain-like CDO28_RS20635 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS20635 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS20640 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CDO28_RS20640 IPR011032 GroES (chaperonin 10)-like CDO28_RS20640 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS20640 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS20640 IPR016040 NAD(P)-binding domain CDO28_RS20640 IPR020843 Polyketide synthase, enoylreductase CDO28_RS20645 IPR003439 ABC transporter-like CDO28_RS20645 IPR003593 AAA+ ATPase domain CDO28_RS20645 IPR017871 ABC transporter, conserved site CDO28_RS20645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20650 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS20650 IPR009057 Homeodomain-like CDO28_RS20650 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS20650 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS20655 IPR003718 OsmC/Ohr family CDO28_RS20655 IPR015946 K homology domain-like, alpha/beta CDO28_RS20655 IPR019953 Organic hydroperoxide resistance protein famiy CDO28_RS20660 IPR005090 Replication protein C CDO28_RS20660 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20660 IPR021760 Replication protein-C C-terminal CDO28_RS20665 IPR003115 ParB/Sulfiredoxin CDO28_RS20665 IPR004437 ParB/RepB/Spo0J partition protein family CDO28_RS20665 IPR011111 RepB plasmid partition CDO28_RS20665 IPR017819 Plasmid partitioning protein, RepB CDO28_RS20670 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDO28_RS20670 IPR017818 Plasmid partitioning protein, RepA CDO28_RS20670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20685 IPR006656 Molybdopterin oxidoreductase CDO28_RS20685 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDO28_RS20685 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDO28_RS20685 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CDO28_RS20690 IPR006443 Formate dehydrogenase, alpha subunit, anaerobic CDO28_RS20690 IPR006656 Molybdopterin oxidoreductase CDO28_RS20690 IPR006657 Molydopterin dinucleotide-binding domain CDO28_RS20690 IPR009010 Aspartate decarboxylase-like domain CDO28_RS20695 IPR006470 Formate dehydrogenase, beta subunit CDO28_RS20695 IPR014603 Formate dehydrogenase, iron-sulphur subunit CDO28_RS20695 IPR015246 Formate dehydrogenase, transmembrane CDO28_RS20695 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS20695 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS20700 IPR006471 Formate dehydrogenase, gamma subunit CDO28_RS20700 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase CDO28_RS20700 IPR016174 Di-haem cytochrome, transmembrane CDO28_RS20705 IPR006452 Formate dehydrogenase accessory protein CDO28_RS20705 IPR024064 FdhE-like CDO28_RS20710 IPR004534 L-seryl-tRNA selenium transferase CDO28_RS20710 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS20710 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS20710 IPR018319 L-seryl-tRNA selenium transferase-like CDO28_RS20710 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain CDO28_RS20715 IPR006597 Sel1-like CDO28_RS20715 IPR011990 Tetratricopeptide-like helical domain CDO28_RS20720 IPR000795 Elongation factor, GTP-binding domain CDO28_RS20720 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CDO28_RS20720 IPR004535 Translation elongation factor, selenocysteine-specific CDO28_RS20720 IPR009000 Translation protein, beta-barrel domain CDO28_RS20720 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDO28_RS20720 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20720 IPR015190 Translation elongation factor SelB, winged helix, type 2 CDO28_RS20720 IPR015191 Translation elongation factor SelB, winged helix, type 3 CDO28_RS20720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20740 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS20740 IPR011006 CheY-like superfamily CDO28_RS20760 IPR002931 Transglutaminase-like CDO28_RS20770 IPR004536 Selenide water dikinase CDO28_RS20770 IPR010918 AIR synthase-related protein, C-terminal domain CDO28_RS20770 IPR016188 PurM, N-terminal-like CDO28_RS20770 IPR023061 Selenide, water dikinase, class I CDO28_RS20780 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS20780 IPR006026 Peptidase, metallopeptidase CDO28_RS20780 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS20780 IPR013858 Peptidase M10 serralysin C-terminal domain CDO28_RS20780 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS20780 IPR024079 Metallopeptidase, catalytic domain CDO28_RS20785 IPR003439 ABC transporter-like CDO28_RS20785 IPR003593 AAA+ ATPase domain CDO28_RS20785 IPR017871 ABC transporter, conserved site CDO28_RS20785 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20785 IPR032781 CDO28_RS20785 CDO28_RS20790 IPR000847 Transcription regulator HTH, LysR CDO28_RS20790 IPR005119 LysR, substrate-binding CDO28_RS20790 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20795 IPR011032 GroES (chaperonin 10)-like CDO28_RS20795 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS20795 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS20795 IPR016040 NAD(P)-binding domain CDO28_RS20795 IPR020843 Polyketide synthase, enoylreductase CDO28_RS20800 IPR018735 Protein of unknown function DUF2277 CDO28_RS20805 IPR001148 Alpha carbonic anhydrase CDO28_RS20805 IPR018338 Carbonic anhydrase, alpha-class, conserved site CDO28_RS20815 IPR000524 Transcription regulator HTH, GntR CDO28_RS20815 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20820 IPR015590 Aldehyde dehydrogenase domain CDO28_RS20820 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS20820 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS20825 IPR015590 Aldehyde dehydrogenase domain CDO28_RS20825 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS20825 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS20830 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDO28_RS20830 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDO28_RS20830 IPR029017 Enolase N-terminal domain-like CDO28_RS20830 IPR029065 Enolase C-terminal domain-like CDO28_RS20835 IPR008928 Six-hairpin glycosidase-like CDO28_RS20835 IPR012341 Six-hairpin glycosidase CDO28_RS20840 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS20840 IPR016040 NAD(P)-binding domain CDO28_RS20840 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS20845 IPR005511 Senescence marker protein-30 (SMP-30) CDO28_RS20845 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS20845 IPR013658 SMP-30/Gluconolactonase/LRE-like region CDO28_RS20850 IPR000524 Transcription regulator HTH, GntR CDO28_RS20850 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS20850 IPR011711 GntR, C-terminal CDO28_RS20850 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20855 IPR000524 Transcription regulator HTH, GntR CDO28_RS20855 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS20855 IPR011711 GntR, C-terminal CDO28_RS20855 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20860 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDO28_RS20860 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDO28_RS20860 IPR029017 Enolase N-terminal domain-like CDO28_RS20860 IPR029065 Enolase C-terminal domain-like CDO28_RS20865 IPR000524 Transcription regulator HTH, GntR CDO28_RS20865 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS20865 IPR011711 GntR, C-terminal CDO28_RS20865 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20870 IPR025997 Periplasmic binding protein domain CDO28_RS20870 IPR028082 Periplasmic binding protein-like I CDO28_RS20875 IPR001851 ABC transporter, permease CDO28_RS20880 IPR003439 ABC transporter-like CDO28_RS20880 IPR003593 AAA+ ATPase domain CDO28_RS20880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20885 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS20885 IPR016040 NAD(P)-binding domain CDO28_RS20885 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS20890 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CDO28_RS20890 IPR011013 Galactose mutarotase-like domain CDO28_RS20890 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup CDO28_RS20895 IPR000843 Transcription regulator HTH, LacI CDO28_RS20895 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS20895 IPR028082 Periplasmic binding protein-like I CDO28_RS20900 IPR000515 MetI-like domain CDO28_RS20900 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS20905 IPR000515 MetI-like domain CDO28_RS20905 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS20910 IPR001320 Ionotropic glutamate receptor CDO28_RS20910 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS20915 IPR003439 ABC transporter-like CDO28_RS20915 IPR003593 AAA+ ATPase domain CDO28_RS20915 IPR017871 ABC transporter, conserved site CDO28_RS20915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20915 IPR030679 CDO28_RS20915 CDO28_RS20920 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDO28_RS20920 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS20920 IPR016040 NAD(P)-binding domain CDO28_RS20920 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CDO28_RS20925 IPR011008 Dimeric alpha-beta barrel CDO28_RS20930 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS20930 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS20935 IPR012413 BA14k family CDO28_RS20940 IPR001544 Aminotransferase, class IV CDO28_RS20945 IPR005321 Peptidase S58, DmpA CDO28_RS20945 IPR016117 ArgJ-like domain CDO28_RS20950 IPR000847 Transcription regulator HTH, LysR CDO28_RS20950 IPR005119 LysR, substrate-binding CDO28_RS20950 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS20955 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS20955 IPR013108 Amidohydrolase 3 CDO28_RS20955 IPR032466 CDO28_RS20955 CDO28_RS20960 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS20960 IPR030678 CDO28_RS20960 CDO28_RS20965 IPR000515 MetI-like domain CDO28_RS20970 IPR000515 MetI-like domain CDO28_RS20975 IPR003439 ABC transporter-like CDO28_RS20975 IPR003593 AAA+ ATPase domain CDO28_RS20975 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20980 IPR003439 ABC transporter-like CDO28_RS20980 IPR003593 AAA+ ATPase domain CDO28_RS20980 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS20980 IPR017871 ABC transporter, conserved site CDO28_RS20980 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS20985 IPR010985 Ribbon-helix-helix CDO28_RS20985 IPR013321 Arc-type ribbon-helix-helix CDO28_RS20990 IPR002716 PIN domain CDO28_RS20990 IPR022907 VapC family CDO28_RS20990 IPR029060 PIN domain-like CDO28_RS20995 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS20995 IPR011057 Mss4-like CDO28_RS21000 IPR000014 PAS domain CDO28_RS21000 IPR001610 PAC motif CDO28_RS21000 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS21000 IPR011102 Signal transduction histidine kinase, HWE region CDO28_RS21000 IPR013656 PAS fold-4 CDO28_RS21000 IPR013767 PAS fold CDO28_RS21005 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS21005 IPR011006 CheY-like superfamily CDO28_RS21010 IPR000160 GGDEF domain CDO28_RS21010 IPR029787 Nucleotide cyclase CDO28_RS21015 IPR001623 DnaJ domain CDO28_RS21015 IPR002939 Chaperone DnaJ, C-terminal CDO28_RS21015 IPR008971 HSP40/DnaJ peptide-binding CDO28_RS21025 IPR009056 Cytochrome c-like domain CDO28_RS21040 IPR001844 Chaperonin Cpn60 CDO28_RS21040 IPR002423 Chaperonin Cpn60/TCP-1 CDO28_RS21040 IPR018370 Chaperonin Cpn60, conserved site CDO28_RS21040 IPR027409 GroEL-like apical domain CDO28_RS21040 IPR027413 GroEL-like equatorial domain CDO28_RS21045 IPR011032 GroES (chaperonin 10)-like CDO28_RS21045 IPR018369 Chaperonin Cpn10, conserved site CDO28_RS21045 IPR020818 Chaperonin Cpn10 CDO28_RS21050 IPR002059 Cold-shock protein, DNA-binding CDO28_RS21050 IPR011129 Cold shock protein CDO28_RS21050 IPR012156 Cold shock, CspA CDO28_RS21050 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS21050 IPR019844 Cold-shock conserved site CDO28_RS21060 IPR005804 Fatty acid desaturase, type 1 CDO28_RS21075 IPR025711 PepSY domain CDO28_RS21080 IPR002549 Uncharacterised protein family UPF0118 CDO28_RS21085 IPR000160 GGDEF domain CDO28_RS21085 IPR001633 EAL domain CDO28_RS21085 IPR007892 CHASE4 CDO28_RS21085 IPR029787 Nucleotide cyclase CDO28_RS21090 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase CDO28_RS21090 IPR028973 3-demethylubiquinone-9 3-methyltransferase CDO28_RS21090 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS21095 IPR000209 Peptidase S8/S53 domain CDO28_RS21095 IPR015500 Peptidase S8, subtilisin-related CDO28_RS21095 IPR023828 Peptidase S8, subtilisin, Ser-active site CDO28_RS21100 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS21100 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS21100 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS21100 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS21100 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS21100 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS21120 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CDO28_RS21120 IPR023459 Transcription elongation factor GreA/GreB family CDO28_RS21125 IPR000873 AMP-dependent synthetase/ligase CDO28_RS21125 IPR020845 AMP-binding, conserved site CDO28_RS21125 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS21130 IPR007956 Malonyl-CoA decarboxylase CDO28_RS21135 IPR004681 TRAP transporter permease protein CDO28_RS21135 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS21140 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS21145 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS21150 IPR000524 Transcription regulator HTH, GntR CDO28_RS21150 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS21150 IPR011711 GntR, C-terminal CDO28_RS21150 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS21155 IPR001775 GspD/PilQ family CDO28_RS21155 IPR004846 Type II/III secretion system CDO28_RS21155 IPR007055 BON domain CDO28_RS21155 IPR032789 CDO28_RS21155 CDO28_RS21165 IPR011990 Tetratricopeptide-like helical domain CDO28_RS21165 IPR019734 Tetratricopeptide repeat CDO28_RS21170 IPR013216 Methyltransferase type 11 CDO28_RS21170 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CDO28_RS21170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS21175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS21180 IPR022742 Putative lysophospholipase CDO28_RS21180 IPR029058 Alpha/Beta hydrolase fold CDO28_RS21185 IPR016898 Polyphosphate kinase 2 CDO28_RS21185 IPR022486 Polyphosphate kinase 2, PA0141 CDO28_RS21185 IPR022488 Polyphosphate kinase-2-related CDO28_RS21185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS21190 IPR006685 Mechanosensitive ion channel MscS CDO28_RS21190 IPR010920 Like-Sm (LSM) domain CDO28_RS21190 IPR020846 Major facilitator superfamily domain CDO28_RS21195 IPR014845 Uncharacterised protein GYD CDO28_RS21200 IPR011990 Tetratricopeptide-like helical domain CDO28_RS21210 IPR003719 Phenazine biosynthesis PhzF protein CDO28_RS21215 IPR002059 Cold-shock protein, DNA-binding CDO28_RS21215 IPR011129 Cold shock protein CDO28_RS21215 IPR012156 Cold shock, CspA CDO28_RS21215 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS21215 IPR019844 Cold-shock conserved site CDO28_RS21220 IPR011701 Major facilitator superfamily CDO28_RS21220 IPR020846 Major facilitator superfamily domain CDO28_RS21225 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS21225 IPR016040 NAD(P)-binding domain CDO28_RS21225 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS21235 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS21235 IPR009057 Homeodomain-like CDO28_RS21235 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS21245 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDO28_RS21245 IPR023393 START-like domain CDO28_RS21250 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS21250 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS21260 IPR005511 Senescence marker protein-30 (SMP-30) CDO28_RS21260 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS21260 IPR013658 SMP-30/Gluconolactonase/LRE-like region CDO28_RS21265 IPR001851 ABC transporter, permease CDO28_RS21270 IPR001851 ABC transporter, permease CDO28_RS21275 IPR003439 ABC transporter-like CDO28_RS21275 IPR003593 AAA+ ATPase domain CDO28_RS21275 IPR017871 ABC transporter, conserved site CDO28_RS21275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS21280 IPR025997 Periplasmic binding protein domain CDO28_RS21280 IPR028082 Periplasmic binding protein-like I CDO28_RS21285 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS21285 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDO28_RS21285 IPR029016 GAF domain-like CDO28_RS21290 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS21290 IPR011006 CheY-like superfamily CDO28_RS21290 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS21290 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS21310 IPR007045 5-keto 4-deoxyuronate isomerase CDO28_RS21310 IPR011051 RmlC-like cupin domain CDO28_RS21310 IPR021120 KduI/IolB isomerase CDO28_RS21310 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain CDO28_RS21310 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain CDO28_RS21315 IPR003439 ABC transporter-like CDO28_RS21315 IPR003593 AAA+ ATPase domain CDO28_RS21315 IPR017871 ABC transporter, conserved site CDO28_RS21315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS21320 IPR001851 ABC transporter, permease CDO28_RS21325 IPR025997 Periplasmic binding protein domain CDO28_RS21325 IPR028082 Periplasmic binding protein-like I CDO28_RS21330 IPR015590 Aldehyde dehydrogenase domain CDO28_RS21330 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS21330 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS21330 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS21335 IPR000524 Transcription regulator HTH, GntR CDO28_RS21335 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS21335 IPR011711 GntR, C-terminal CDO28_RS21335 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS21340 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS21340 IPR009057 Homeodomain-like CDO28_RS21340 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS21345 IPR005829 Sugar transporter, conserved site CDO28_RS21345 IPR011701 Major facilitator superfamily CDO28_RS21345 IPR020846 Major facilitator superfamily domain CDO28_RS21350 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CDO28_RS21350 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS21350 IPR012938 Glucose/Sorbosone dehydrogenase CDO28_RS21355 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CDO28_RS21355 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CDO28_RS21355 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CDO28_RS21355 IPR014362 Glutamate dehydrogenase CDO28_RS21355 IPR016040 NAD(P)-binding domain CDO28_RS21365 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CDO28_RS21370 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CDO28_RS21375 IPR001830 Glycosyl transferase, family 20 CDO28_RS21375 IPR012766 Alpha,alpha-trehalose-phosphate synthase CDO28_RS21380 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CDO28_RS21380 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDO28_RS21385 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDO28_RS21385 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS21385 IPR013328 Dehydrogenase, multihelical CDO28_RS21385 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CDO28_RS21385 IPR016040 NAD(P)-binding domain CDO28_RS21385 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDO28_RS21390 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS21390 IPR016040 NAD(P)-binding domain CDO28_RS21395 IPR004113 FAD-linked oxidase, C-terminal CDO28_RS21395 IPR006094 FAD linked oxidase, N-terminal CDO28_RS21395 IPR016164 FAD-linked oxidase-like, C-terminal CDO28_RS21395 IPR016166 FAD-binding, type 2 CDO28_RS21395 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS21395 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS21395 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDO28_RS21400 IPR000524 Transcription regulator HTH, GntR CDO28_RS21400 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS21400 IPR011711 GntR, C-terminal CDO28_RS21400 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS21405 IPR011234 Fumarylacetoacetase, C-terminal-related CDO28_RS21410 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS21415 IPR004681 TRAP transporter permease protein CDO28_RS21415 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS21420 IPR004682 TRAP dicarboxylate transporter CDO28_RS21420 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS21425 IPR018679 Protein of unknown function DUF2161 CDO28_RS21430 IPR012337 Ribonuclease H-like domain CDO28_RS21430 IPR013520 Exonuclease, RNase T/DNA polymerase III CDO28_RS21440 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDO28_RS21440 IPR013785 Aldolase-type TIM barrel CDO28_RS21440 IPR016040 NAD(P)-binding domain CDO28_RS21440 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS21445 IPR013094 Alpha/beta hydrolase fold-3 CDO28_RS21445 IPR029058 Alpha/Beta hydrolase fold CDO28_RS21450 IPR015590 Aldehyde dehydrogenase domain CDO28_RS21450 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS21450 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS21450 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS21450 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS21455 IPR001670 Alcohol dehydrogenase, iron-type CDO28_RS21460 IPR003767 Malate/L-lactate dehydrogenase CDO28_RS21465 IPR000485 AsnC-type HTH domain CDO28_RS21465 IPR000524 Transcription regulator HTH, GntR CDO28_RS21465 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS21465 IPR011711 GntR, C-terminal CDO28_RS21465 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS21470 IPR003439 ABC transporter-like CDO28_RS21470 IPR003593 AAA+ ATPase domain CDO28_RS21470 IPR017871 ABC transporter, conserved site CDO28_RS21470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS21475 IPR001851 ABC transporter, permease CDO28_RS21480 IPR025997 Periplasmic binding protein domain CDO28_RS21480 IPR028082 Periplasmic binding protein-like I CDO28_RS21485 IPR002818 ThiJ/PfpI CDO28_RS21485 IPR006286 Peptidase C56, PfpI CDO28_RS21485 IPR029062 Class I glutamine amidotransferase-like CDO28_RS21490 IPR014580 Uncharacterised conserved protein UCP033199 CDO28_RS21490 IPR023204 SP1917 domain CDO28_RS21505 IPR013216 Methyltransferase type 11 CDO28_RS21505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS21510 IPR002109 Glutaredoxin CDO28_RS21510 IPR009908 Methylamine utilisation protein, MauE CDO28_RS21510 IPR012336 Thioredoxin-like fold CDO28_RS21510 IPR014025 Glutaredoxin subgroup CDO28_RS21515 IPR000551 MerR-type HTH domain CDO28_RS21515 IPR009061 DNA binding domain, putative CDO28_RS21540 IPR013417 Conserved hypothetical protein CHP02588 CDO28_RS21540 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS21545 IPR013416 Conserved hypothetical protein CHP02587, putative integral membrane CDO28_RS21545 IPR024464 Protein of unknown function DUF2391 CDO28_RS21555 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS21555 IPR011006 CheY-like superfamily CDO28_RS21560 IPR002716 PIN domain CDO28_RS21560 IPR029060 PIN domain-like CDO28_RS21565 IPR019239 Protein of unknown function DUF2191 CDO28_RS21575 IPR002818 ThiJ/PfpI CDO28_RS21575 IPR009057 Homeodomain-like CDO28_RS21575 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS21575 IPR018062 HTH domain AraC-type, conserved site CDO28_RS21575 IPR029062 Class I glutamine amidotransferase-like CDO28_RS21580 IPR004695 Voltage-dependent anion channel CDO28_RS21590 IPR009057 Homeodomain-like CDO28_RS21590 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS21600 IPR005594 YadA-like, C-terminal CDO28_RS21600 IPR008635 Coiled stalk of trimeric autotransporter adhesin CDO28_RS21600 IPR008640 Head domain of trimeric autotransporter adhesin CDO28_RS21600 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS21605 IPR010642 Invasion protein B CDO28_RS21615 IPR025240 Domain of unknown function DUF4189 CDO28_RS21620 IPR010642 Invasion protein B CDO28_RS21625 IPR005330 MHYT CDO28_RS21625 IPR007492 LytTR DNA-binding domain CDO28_RS21625 IPR012073 LytTR MHYT transcriptional regulator CDO28_RS21630 IPR001633 EAL domain CDO28_RS21635 IPR008868 Bacterial TniB CDO28_RS21635 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS21640 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS21640 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS21640 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS21645 IPR021529 Protein of unknown function DUF2798 CDO28_RS21650 IPR008030 NmrA-like domain CDO28_RS21650 IPR016040 NAD(P)-binding domain CDO28_RS21655 IPR000847 Transcription regulator HTH, LysR CDO28_RS21655 IPR005119 LysR, substrate-binding CDO28_RS21655 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS21660 IPR007337 RelB antitoxin/Antitoxin DinJ CDO28_RS21670 IPR009199 PhoPQ-activated pathogenicity-related protein, PqaA type CDO28_RS21670 IPR029058 Alpha/Beta hydrolase fold CDO28_RS21685 IPR021327 Protein of unknown function DUF2934 CDO28_RS21705 IPR011032 GroES (chaperonin 10)-like CDO28_RS21705 IPR018369 Chaperonin Cpn10, conserved site CDO28_RS21705 IPR020818 Chaperonin Cpn10 CDO28_RS21710 IPR001844 Chaperonin Cpn60 CDO28_RS21710 IPR002423 Chaperonin Cpn60/TCP-1 CDO28_RS21710 IPR018370 Chaperonin Cpn60, conserved site CDO28_RS21710 IPR027409 GroEL-like apical domain CDO28_RS21710 IPR027413 GroEL-like equatorial domain CDO28_RS21715 IPR001478 PDZ domain CDO28_RS21715 IPR001940 Peptidase S1C CDO28_RS21715 IPR009003 Trypsin-like cysteine/serine peptidase domain CDO28_RS21715 IPR011782 Peptidase S1C, Do CDO28_RS21720 IPR013783 Immunoglobulin-like fold CDO28_RS21720 IPR018905 Alpha-galactosidase, NEW3 domain CDO28_RS21725 IPR003439 ABC transporter-like CDO28_RS21725 IPR003593 AAA+ ATPase domain CDO28_RS21725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS21730 IPR032688 CDO28_RS21730 CDO28_RS21740 IPR012336 Thioredoxin-like fold CDO28_RS21745 IPR000642 Peptidase M41 CDO28_RS21745 IPR003593 AAA+ ATPase domain CDO28_RS21745 IPR003959 ATPase, AAA-type, core CDO28_RS21745 IPR003960 ATPase, AAA-type, conserved site CDO28_RS21745 IPR005936 Peptidase, FtsH CDO28_RS21745 IPR011546 Peptidase M41, FtsH extracellular CDO28_RS21745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS21750 IPR005530 SPW repeat CDO28_RS21755 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial CDO28_RS21775 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CDO28_RS21775 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS21775 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS21775 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS21775 IPR028202 Reductase, C-terminal CDO28_RS21780 IPR025997 Periplasmic binding protein domain CDO28_RS21780 IPR028082 Periplasmic binding protein-like I CDO28_RS21785 IPR012747 MocE Rieske [2Fe-2S] CDO28_RS21785 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS21795 IPR000843 Transcription regulator HTH, LacI CDO28_RS21795 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS21800 IPR013830 CDO28_RS21800 CDO28_RS21805 IPR001279 Beta-lactamase-like CDO28_RS21825 IPR010385 Protein of unknown function DUF982 CDO28_RS21830 IPR012347 Ferritin-related CDO28_RS21830 IPR025419 Domain of unknown function DUF4142 CDO28_RS21845 IPR021327 Protein of unknown function DUF2934 CDO28_RS21850 IPR001296 Glycosyl transferase, family 1 CDO28_RS21855 IPR004379 UDP-galactopyranose mutase CDO28_RS21855 IPR015899 UDP-galactopyranose mutase, C-terminal CDO28_RS21855 IPR016040 NAD(P)-binding domain CDO28_RS21860 IPR000683 Oxidoreductase, N-terminal CDO28_RS21860 IPR001296 Glycosyl transferase, family 1 CDO28_RS21860 IPR004104 Oxidoreductase, C-terminal CDO28_RS21860 IPR011032 GroES (chaperonin 10)-like CDO28_RS21860 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS21860 IPR016040 NAD(P)-binding domain CDO28_RS21865 IPR001296 Glycosyl transferase, family 1 CDO28_RS21865 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS21865 IPR017853 Glycoside hydrolase, superfamily CDO28_RS21880 IPR003313 AraC-type arabinose-binding/dimerisation domain CDO28_RS21880 IPR009057 Homeodomain-like CDO28_RS21880 IPR011051 RmlC-like cupin domain CDO28_RS21880 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS21880 IPR018062 HTH domain AraC-type, conserved site CDO28_RS21880 IPR032783 CDO28_RS21880 CDO28_RS21885 IPR003726 Homocysteine S-methyltransferase CDO28_RS21890 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS21890 IPR029058 Alpha/Beta hydrolase fold CDO28_RS21895 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS21895 IPR009057 Homeodomain-like CDO28_RS21895 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS21905 IPR009057 Homeodomain-like CDO28_RS21905 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS21905 IPR018062 HTH domain AraC-type, conserved site CDO28_RS21905 IPR029062 Class I glutamine amidotransferase-like CDO28_RS21910 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS21910 IPR025714 Methyltransferase domain CDO28_RS21910 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS21915 IPR007337 RelB antitoxin/Antitoxin DinJ CDO28_RS21920 IPR008462 CsbD-like CDO28_RS21930 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS21930 IPR011006 CheY-like superfamily CDO28_RS21935 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS21935 IPR011102 Signal transduction histidine kinase, HWE region CDO28_RS21940 IPR003593 AAA+ ATPase domain CDO28_RS21940 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA CDO28_RS21940 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS21940 IPR030665 CDO28_RS21940 CDO28_RS21950 IPR000709 Leu/Ile/Val-binding protein CDO28_RS21950 IPR028081 Leucine-binding protein domain CDO28_RS21950 IPR028082 Periplasmic binding protein-like I CDO28_RS21955 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS21955 IPR003660 HAMP linker domain CDO28_RS21955 IPR029787 Nucleotide cyclase CDO28_RS21960 IPR003439 ABC transporter-like CDO28_RS21960 IPR003593 AAA+ ATPase domain CDO28_RS21960 IPR005890 Nitrate transport ATP-binding subunit C/D CDO28_RS21960 IPR017871 ABC transporter, conserved site CDO28_RS21960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS21965 IPR000515 MetI-like domain CDO28_RS21965 IPR005889 Nitrate transport permease CDO28_RS21990 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS22000 IPR010297 Protein of unknown function DUF900, hydrolase-like CDO28_RS22000 IPR014586 Uncharacterised conserved protein UCP033909 CDO28_RS22000 IPR029058 Alpha/Beta hydrolase fold CDO28_RS22005 IPR011990 Tetratricopeptide-like helical domain CDO28_RS22015 IPR019207 Protein of unknown function DUF2092, periplasmic CDO28_RS22015 IPR029046 Lipoprotein localisation LolA/LolB/LppX CDO28_RS22025 IPR010621 Domain of unknown function DUF1214 CDO28_RS22025 IPR010679 Domain of unknown function DUF1254 CDO28_RS22025 IPR023289 VPA0735-like domain CDO28_RS22030 IPR010621 Domain of unknown function DUF1214 CDO28_RS22030 IPR010679 Domain of unknown function DUF1254 CDO28_RS22030 IPR023289 VPA0735-like domain CDO28_RS22035 IPR005126 NapC/NirT cytochrome c, N-terminal CDO28_RS22035 IPR011031 Multihaem cytochrome CDO28_RS22040 IPR007729 2-keto-3-deoxy-galactonokinase CDO28_RS22045 IPR002220 DapA-like CDO28_RS22045 IPR013785 Aldolase-type TIM barrel CDO28_RS22050 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDO28_RS22050 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDO28_RS22050 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CDO28_RS22050 IPR029017 Enolase N-terminal domain-like CDO28_RS22050 IPR029065 Enolase C-terminal domain-like CDO28_RS22055 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS22060 IPR000515 MetI-like domain CDO28_RS22065 IPR000515 MetI-like domain CDO28_RS22070 IPR003439 ABC transporter-like CDO28_RS22070 IPR003593 AAA+ ATPase domain CDO28_RS22070 IPR017871 ABC transporter, conserved site CDO28_RS22070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS22075 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS22075 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS22075 IPR013611 Transport-associated OB, type 2 CDO28_RS22075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS22080 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS22080 IPR016040 NAD(P)-binding domain CDO28_RS22085 IPR005471 Transcription regulator IclR, N-terminal CDO28_RS22085 IPR005511 Senescence marker protein-30 (SMP-30) CDO28_RS22085 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS22085 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22085 IPR013658 SMP-30/Gluconolactonase/LRE-like region CDO28_RS22085 IPR014757 Transcription regulator IclR, C-terminal CDO28_RS22085 IPR029016 GAF domain-like CDO28_RS22090 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS22090 IPR016040 NAD(P)-binding domain CDO28_RS22115 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase CDO28_RS22115 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CDO28_RS22115 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS22120 IPR001034 HTH DeoR N-terminal domain CDO28_RS22120 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22120 IPR014036 DeoR C-terminal sensor domain CDO28_RS22120 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CDO28_RS22130 IPR000515 MetI-like domain CDO28_RS22135 IPR000515 MetI-like domain CDO28_RS22140 IPR001207 Transposase, mutator type CDO28_RS22145 IPR025877 MobA-like NTP transferase domain CDO28_RS22145 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS22150 IPR006204 GHMP kinase N-terminal domain CDO28_RS22150 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related CDO28_RS22150 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS22150 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS22155 IPR000462 CDP-alcohol phosphatidyltransferase CDO28_RS22160 IPR001962 Asparagine synthase CDO28_RS22160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS22160 IPR017932 Glutamine amidotransferase type 2 domain CDO28_RS22160 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS22185 IPR001584 Integrase, catalytic core CDO28_RS22185 IPR012337 Ribonuclease H-like domain CDO28_RS22195 IPR003346 Transposase, IS116/IS110/IS902 CDO28_RS22205 IPR008807 ROSMUCR transcriptional regulator CDO28_RS22210 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS22210 IPR030823 CDO28_RS22210 CDO28_RS22215 IPR000683 Oxidoreductase, N-terminal CDO28_RS22215 IPR016040 NAD(P)-binding domain CDO28_RS22220 IPR002509 Polysaccharide deacetylase CDO28_RS22220 IPR006879 Uncharacterised protein family UPF0249/HpnK CDO28_RS22220 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS22225 IPR000683 Oxidoreductase, N-terminal CDO28_RS22225 IPR004104 Oxidoreductase, C-terminal CDO28_RS22225 IPR016040 NAD(P)-binding domain CDO28_RS22230 IPR025997 Periplasmic binding protein domain CDO28_RS22230 IPR028082 Periplasmic binding protein-like I CDO28_RS22235 IPR000524 Transcription regulator HTH, GntR CDO28_RS22235 IPR004839 Aminotransferase, class I/classII CDO28_RS22235 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22235 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS22235 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS22240 IPR005804 Fatty acid desaturase, type 1 CDO28_RS22245 IPR012747 MocE Rieske [2Fe-2S] CDO28_RS22245 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS22250 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS22250 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS22250 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS22250 IPR028202 Reductase, C-terminal CDO28_RS22255 IPR003700 Ketopantoate hydroxymethyltransferase CDO28_RS22255 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS22260 IPR002376 Formyl transferase, N-terminal CDO28_RS22260 IPR004810 Formyltetrahydrofolate deformylase CDO28_RS22265 IPR009056 Cytochrome c-like domain CDO28_RS22270 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CDO28_RS22270 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CDO28_RS22270 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS22275 IPR027056 Gluconate 2-dehydrogenase subunit 3 CDO28_RS22280 IPR011701 Major facilitator superfamily CDO28_RS22280 IPR020846 Major facilitator superfamily domain CDO28_RS22285 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDO28_RS22285 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS22285 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS22290 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDO28_RS22290 IPR009727 NifT/FixU CDO28_RS22290 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS22290 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS22290 IPR024044 NifT/FixU barrel-like domain CDO28_RS22295 IPR002220 DapA-like CDO28_RS22295 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CDO28_RS22295 IPR013785 Aldolase-type TIM barrel CDO28_RS22295 IPR020624 Dihydrodipicolinate synthetase, conserved site CDO28_RS22295 IPR020625 Dihydrodipicolinate synthetase, active site CDO28_RS22300 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS22320 IPR000394 RNA polymerase sigma factor 54 CDO28_RS22325 IPR000394 RNA polymerase sigma factor 54 CDO28_RS22325 IPR007634 RNA polymerase sigma factor 54, DNA-binding CDO28_RS22335 IPR000534 Semialdehyde dehydrogenase, NAD-binding CDO28_RS22335 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type CDO28_RS22335 IPR012080 Aspartate-semialdehyde dehydrogenase CDO28_RS22335 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CDO28_RS22335 IPR016040 NAD(P)-binding domain CDO28_RS22340 IPR001048 Aspartate/glutamate/uridylate kinase CDO28_RS22350 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CDO28_RS22350 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CDO28_RS22350 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CDO28_RS22350 IPR014362 Glutamate dehydrogenase CDO28_RS22350 IPR016040 NAD(P)-binding domain CDO28_RS22360 IPR002504 Inorganic polyphosphate/ATP-NAD kinase CDO28_RS22360 IPR016064 ATP-NAD kinase-like domain CDO28_RS22360 IPR017437 ATP-NAD kinase, PpnK-type, all-beta CDO28_RS22360 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 CDO28_RS22365 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CDO28_RS22365 IPR005982 Thioredoxin reductase CDO28_RS22365 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS22370 IPR001844 Chaperonin Cpn60 CDO28_RS22370 IPR002423 Chaperonin Cpn60/TCP-1 CDO28_RS22370 IPR018370 Chaperonin Cpn60, conserved site CDO28_RS22370 IPR027409 GroEL-like apical domain CDO28_RS22370 IPR027413 GroEL-like equatorial domain CDO28_RS22375 IPR011032 GroES (chaperonin 10)-like CDO28_RS22375 IPR018369 Chaperonin Cpn10, conserved site CDO28_RS22375 IPR020818 Chaperonin Cpn10 CDO28_RS22385 IPR000847 Transcription regulator HTH, LysR CDO28_RS22385 IPR005119 LysR, substrate-binding CDO28_RS22385 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22390 IPR008257 Renal dipeptidase family CDO28_RS22390 IPR032466 CDO28_RS22390 CDO28_RS22395 IPR003439 ABC transporter-like CDO28_RS22395 IPR003593 AAA+ ATPase domain CDO28_RS22395 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS22395 IPR017871 ABC transporter, conserved site CDO28_RS22395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS22400 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS22400 IPR030678 CDO28_RS22400 CDO28_RS22405 IPR000515 MetI-like domain CDO28_RS22410 IPR000515 MetI-like domain CDO28_RS22415 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain CDO28_RS22415 IPR005674 CocE/Serine esterase CDO28_RS22415 IPR008979 Galactose-binding domain-like CDO28_RS22415 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal CDO28_RS22415 IPR029058 Alpha/Beta hydrolase fold CDO28_RS22430 IPR004291 Transposase, IS66 CDO28_RS22430 IPR024463 Transposase TnpC, homeodomain CDO28_RS22430 IPR024474 Zinc-finger binding domain of transposase IS66 CDO28_RS22435 IPR008878 Transposase IS66, Orf2 CDO28_RS22440 IPR002514 Transposase IS3/IS911family CDO28_RS22440 IPR010921 Trp repressor/replication initiator CDO28_RS22440 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22455 IPR001048 Aspartate/glutamate/uridylate kinase CDO28_RS22455 IPR001057 Glutamate/acetylglutamate kinase CDO28_RS22455 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase CDO28_RS22455 IPR011529 Glutamate 5-kinase CDO28_RS22455 IPR019797 Glutamate 5-kinase, conserved site CDO28_RS22460 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDO28_RS22460 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS22465 IPR003719 Phenazine biosynthesis PhzF protein CDO28_RS22470 IPR000873 AMP-dependent synthetase/ligase CDO28_RS22470 IPR003679 Aminoglycoside 3-N-acetyltransferase CDO28_RS22470 IPR020845 AMP-binding, conserved site CDO28_RS22480 IPR001584 Integrase, catalytic core CDO28_RS22480 IPR012337 Ribonuclease H-like domain CDO28_RS22490 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDO28_RS22490 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS22490 IPR016185 Pre-ATP-grasp domain CDO28_RS22495 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CDO28_RS22495 IPR005982 Thioredoxin reductase CDO28_RS22495 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS22505 IPR001958 Tetracycline resistance protein, TetA/multidrug resistance protein MdtG CDO28_RS22505 IPR011701 Major facilitator superfamily CDO28_RS22505 IPR020846 Major facilitator superfamily domain CDO28_RS22510 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDO28_RS22510 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS22510 IPR016185 Pre-ATP-grasp domain CDO28_RS22525 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS22525 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22525 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS22530 IPR000595 Cyclic nucleotide-binding domain CDO28_RS22530 IPR014710 RmlC-like jelly roll fold CDO28_RS22530 IPR018490 Cyclic nucleotide-binding-like CDO28_RS22535 IPR006656 Molybdopterin oxidoreductase CDO28_RS22535 IPR006657 Molydopterin dinucleotide-binding domain CDO28_RS22535 IPR009010 Aspartate decarboxylase-like domain CDO28_RS22535 IPR010051 Periplasmic nitrate reductase, large subunit CDO28_RS22540 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CDO28_RS22540 IPR011031 Multihaem cytochrome CDO28_RS22540 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain CDO28_RS22545 IPR005126 NapC/NirT cytochrome c, N-terminal CDO28_RS22545 IPR011031 Multihaem cytochrome CDO28_RS22545 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT CDO28_RS22545 IPR024717 Denitrification system component NapC/NirT/NrfH CDO28_RS22550 IPR006015 Universal stress protein A CDO28_RS22550 IPR006016 UspA CDO28_RS22550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS22555 IPR000014 PAS domain CDO28_RS22555 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS22555 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS22555 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS22555 IPR013767 PAS fold CDO28_RS22560 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS22560 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS22560 IPR011006 CheY-like superfamily CDO28_RS22560 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22560 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS22570 IPR000595 Cyclic nucleotide-binding domain CDO28_RS22570 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22570 IPR012318 Helix-turn-helix motif, Crp-type CDO28_RS22570 IPR014710 RmlC-like jelly roll fold CDO28_RS22570 IPR018335 Transcription regulator HTH, Crp-type, conserved site CDO28_RS22570 IPR018490 Cyclic nucleotide-binding-like CDO28_RS22580 IPR000883 Cytochrome c oxidase subunit I CDO28_RS22580 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CDO28_RS22580 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDO28_RS22580 IPR023616 Cytochrome c oxidase, subunit I domain CDO28_RS22585 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CDO28_RS22585 IPR009056 Cytochrome c-like domain CDO28_RS22590 IPR008621 Cbb3-type cytochrome oxidase component CDO28_RS22595 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CDO28_RS22595 IPR008168 Cytochrome c, class IC CDO28_RS22595 IPR009056 Cytochrome c-like domain CDO28_RS22595 IPR032858 CDO28_RS22595 CDO28_RS22600 IPR013783 Immunoglobulin-like fold CDO28_RS22600 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG CDO28_RS22600 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS22600 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS22600 IPR032879 CDO28_RS22600 CDO28_RS22605 IPR008620 FixH CDO28_RS22605 IPR018037 FixH, Proteobacterial CDO28_RS22610 IPR001757 Cation-transporting P-type ATPase CDO28_RS22610 IPR006121 Heavy metal-associated domain, HMA CDO28_RS22610 IPR008250 P-type ATPase, A domain CDO28_RS22610 IPR017969 Heavy-metal-associated, conserved site CDO28_RS22610 IPR018303 P-type ATPase, phosphorylation site CDO28_RS22610 IPR023214 HAD-like domain CDO28_RS22610 IPR027256 Cation-transporting P-type ATPase, subfamily IB CDO28_RS22615 IPR004714 Cytochrome oxidase maturation protein cbb3-type CDO28_RS22620 IPR000595 Cyclic nucleotide-binding domain CDO28_RS22620 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22620 IPR012318 Helix-turn-helix motif, Crp-type CDO28_RS22620 IPR014710 RmlC-like jelly roll fold CDO28_RS22620 IPR018490 Cyclic nucleotide-binding-like CDO28_RS22635 IPR012533 GLE1, N-terminal, bacteria CDO28_RS22645 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS22645 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS22650 IPR005322 Peptidase C69, dipeptidase A CDO28_RS22655 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS22655 IPR030678 CDO28_RS22655 CDO28_RS22660 IPR000515 MetI-like domain CDO28_RS22665 IPR000515 MetI-like domain CDO28_RS22670 IPR003439 ABC transporter-like CDO28_RS22670 IPR003593 AAA+ ATPase domain CDO28_RS22670 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS22670 IPR017871 ABC transporter, conserved site CDO28_RS22670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS22675 IPR003439 ABC transporter-like CDO28_RS22675 IPR003593 AAA+ ATPase domain CDO28_RS22675 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS22675 IPR017871 ABC transporter, conserved site CDO28_RS22675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS22680 IPR010290 Transmembrane secretion effector CDO28_RS22680 IPR020846 Major facilitator superfamily domain CDO28_RS22690 IPR002514 Transposase IS3/IS911family CDO28_RS22690 IPR009057 Homeodomain-like CDO28_RS22690 IPR010921 Trp repressor/replication initiator CDO28_RS22695 IPR002514 Transposase IS3/IS911family CDO28_RS22695 IPR009057 Homeodomain-like CDO28_RS22705 IPR001584 Integrase, catalytic core CDO28_RS22705 IPR012337 Ribonuclease H-like domain CDO28_RS22730 IPR000847 Transcription regulator HTH, LysR CDO28_RS22730 IPR005119 LysR, substrate-binding CDO28_RS22730 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22735 IPR002563 Flavin reductase-like, FMN-binding CDO28_RS22735 IPR012349 FMN-binding split barrel CDO28_RS22740 IPR000014 PAS domain CDO28_RS22740 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS22740 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS22740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS22745 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS22745 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS22745 IPR011006 CheY-like superfamily CDO28_RS22745 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22745 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS22755 IPR000595 Cyclic nucleotide-binding domain CDO28_RS22755 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22755 IPR012318 Helix-turn-helix motif, Crp-type CDO28_RS22755 IPR014710 RmlC-like jelly roll fold CDO28_RS22755 IPR018335 Transcription regulator HTH, Crp-type, conserved site CDO28_RS22755 IPR018490 Cyclic nucleotide-binding-like CDO28_RS22765 IPR000883 Cytochrome c oxidase subunit I CDO28_RS22765 IPR004677 Cytochrome c oxidase cbb3-type, subunit I CDO28_RS22765 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDO28_RS22765 IPR023616 Cytochrome c oxidase, subunit I domain CDO28_RS22770 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CDO28_RS22770 IPR009056 Cytochrome c-like domain CDO28_RS22775 IPR008621 Cbb3-type cytochrome oxidase component CDO28_RS22780 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CDO28_RS22780 IPR008168 Cytochrome c, class IC CDO28_RS22780 IPR009056 Cytochrome c-like domain CDO28_RS22780 IPR032858 CDO28_RS22780 CDO28_RS22790 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS22790 IPR011004 Trimeric LpxA-like CDO28_RS22790 IPR018357 Hexapeptide transferase, conserved site CDO28_RS22790 IPR024688 Maltose/galactoside acetyltransferase CDO28_RS22800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS22805 IPR000917 Sulfatase CDO28_RS22805 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS22810 IPR002514 Transposase IS3/IS911family CDO28_RS22810 IPR009057 Homeodomain-like CDO28_RS22820 IPR002059 Cold-shock protein, DNA-binding CDO28_RS22820 IPR011129 Cold shock protein CDO28_RS22820 IPR012156 Cold shock, CspA CDO28_RS22820 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS22820 IPR019844 Cold-shock conserved site CDO28_RS22835 IPR000086 NUDIX hydrolase domain CDO28_RS22835 IPR015797 NUDIX hydrolase domain-like CDO28_RS22845 IPR001463 Sodium:alanine symporter CDO28_RS22860 IPR000524 Transcription regulator HTH, GntR CDO28_RS22860 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS22860 IPR011711 GntR, C-terminal CDO28_RS22860 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS22870 IPR009569 Amino acid synthesis, putative CDO28_RS22875 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS22875 IPR029058 Alpha/Beta hydrolase fold CDO28_RS22880 IPR002563 Flavin reductase-like, FMN-binding CDO28_RS22880 IPR012349 FMN-binding split barrel CDO28_RS22885 IPR011251 Luciferase-like domain CDO28_RS22890 IPR015590 Aldehyde dehydrogenase domain CDO28_RS22890 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS22890 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS22890 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS22890 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS22890 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS22895 IPR011008 Dimeric alpha-beta barrel CDO28_RS22895 IPR012577 NIPSNAP CDO28_RS22905 IPR000515 MetI-like domain CDO28_RS22910 IPR000515 MetI-like domain CDO28_RS22915 IPR003439 ABC transporter-like CDO28_RS22915 IPR003593 AAA+ ATPase domain CDO28_RS22915 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS22915 IPR013611 Transport-associated OB, type 2 CDO28_RS22915 IPR017871 ABC transporter, conserved site CDO28_RS22915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS22920 IPR010102 Succinate semialdehyde dehydrogenase CDO28_RS22920 IPR015590 Aldehyde dehydrogenase domain CDO28_RS22920 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS22920 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS22920 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS22920 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS22920 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS22925 IPR002514 Transposase IS3/IS911family CDO28_RS22925 IPR009057 Homeodomain-like CDO28_RS22940 IPR009727 NifT/FixU CDO28_RS22940 IPR024044 NifT/FixU barrel-like domain CDO28_RS22945 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS22945 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS22950 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CDO28_RS22950 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CDO28_RS22950 IPR005980 Nitrogenase cofactor biosynthesis protein NifB CDO28_RS22950 IPR007197 Radical SAM CDO28_RS22950 IPR013785 Aldolase-type TIM barrel CDO28_RS22955 IPR002078 RNA polymerase sigma factor 54 interaction domain CDO28_RS22955 IPR002197 DNA binding HTH domain, Fis-type CDO28_RS22955 IPR003018 GAF domain CDO28_RS22955 IPR003593 AAA+ ATPase domain CDO28_RS22955 IPR009057 Homeodomain-like CDO28_RS22955 IPR010113 Nif-specific regulatory protein CDO28_RS22955 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDO28_RS22955 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDO28_RS22955 IPR025944 Sigma-54 interaction domain, conserved site CDO28_RS22955 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS22955 IPR029016 GAF domain-like CDO28_RS22960 IPR007859 Electron transfer flavoprotein-ubiquinone oxidoreductase CDO28_RS22960 IPR012206 Ferredoxin-like, FixX CDO28_RS22960 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS22965 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS22970 IPR001308 Electron transfer flavoprotein, alpha subunit CDO28_RS22970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS22970 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDO28_RS22970 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CDO28_RS22970 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site CDO28_RS22970 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS22975 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CDO28_RS22975 IPR012255 Electron transfer flavoprotein, beta subunit CDO28_RS22975 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS22975 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDO28_RS22990 IPR000394 RNA polymerase sigma factor 54 CDO28_RS22995 IPR000394 RNA polymerase sigma factor 54 CDO28_RS22995 IPR007634 RNA polymerase sigma factor 54, DNA-binding CDO28_RS23005 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL CDO28_RS23005 IPR005977 Nitrogenase iron protein NifH CDO28_RS23005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS23005 IPR030655 CDO28_RS23005 CDO28_RS23010 IPR000318 Nitrogenase component 1, conserved site CDO28_RS23010 IPR000510 Nitrogenase/oxidoreductase, component 1 CDO28_RS23010 IPR005972 Nitrogenase molybdenum-iron protein alpha chain CDO28_RS23010 IPR010143 Nitrogenase component 1, alpha chain CDO28_RS23015 IPR000318 Nitrogenase component 1, conserved site CDO28_RS23015 IPR000510 Nitrogenase/oxidoreductase, component 1 CDO28_RS23015 IPR005976 Nitrogenase molybdenum-iron protein beta chain CDO28_RS23015 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal CDO28_RS23020 IPR000318 Nitrogenase component 1, conserved site CDO28_RS23020 IPR000510 Nitrogenase/oxidoreductase, component 1 CDO28_RS23020 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE CDO28_RS23025 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CDO28_RS23025 IPR013480 Nitrogen fixation protein NifX CDO28_RS23030 IPR007774 Putative nitrogen fixation protein CDO28_RS23030 IPR029012 Helix hairpin bin domain CDO28_RS23035 IPR009051 Alpha-helical ferredoxin CDO28_RS23035 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific CDO28_RS23035 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS23035 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS23050 IPR024239 Exopolysaccharide production repressor CDO28_RS23055 IPR000847 Transcription regulator HTH, LysR CDO28_RS23055 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23085 IPR000847 Transcription regulator HTH, LysR CDO28_RS23085 IPR005119 LysR, substrate-binding CDO28_RS23085 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23095 IPR000863 Sulfotransferase domain CDO28_RS23095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS23100 IPR006162 Phosphopantetheine attachment site CDO28_RS23100 IPR009081 Acyl carrier protein-like CDO28_RS23105 IPR014030 Beta-ketoacyl synthase, N-terminal CDO28_RS23105 IPR014031 Beta-ketoacyl synthase, C-terminal CDO28_RS23105 IPR016039 Thiolase-like CDO28_RS23105 IPR018201 Beta-ketoacyl synthase, active site CDO28_RS23105 IPR020615 Thiolase, acyl-enzyme intermediate active site CDO28_RS23105 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CDO28_RS23110 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS23110 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CDO28_RS23110 IPR016040 NAD(P)-binding domain CDO28_RS23110 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS23120 IPR002500 Phosphoadenosine phosphosulphate reductase CDO28_RS23120 IPR011784 Sulphate adenylyltransferase, small subunit CDO28_RS23120 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS23125 IPR000795 Elongation factor, GTP-binding domain CDO28_RS23125 IPR002891 Adenylylsulphate kinase CDO28_RS23125 IPR009000 Translation protein, beta-barrel domain CDO28_RS23125 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDO28_RS23125 IPR011779 Sulphate adenylyltransferase, large subunit CDO28_RS23125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS23125 IPR031157 CDO28_RS23125 CDO28_RS23140 IPR000412 ABC-2 transporter CDO28_RS23140 IPR005981 ABC-2 type transporter, NodJ CDO28_RS23140 IPR013525 ABC-2 type transporter CDO28_RS23145 IPR003439 ABC transporter-like CDO28_RS23145 IPR003593 AAA+ ATPase domain CDO28_RS23145 IPR005978 Nodulation ABC transporter, NodI CDO28_RS23145 IPR017871 ABC transporter, conserved site CDO28_RS23145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS23150 IPR001173 Glycosyltransferase 2-like CDO28_RS23150 IPR026463 Chitooligosaccharide synthase NodC CDO28_RS23150 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS23155 IPR002509 Polysaccharide deacetylase CDO28_RS23155 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS23155 IPR026402 Chitooligosaccharide deacetylase NodB CDO28_RS23160 IPR003484 N-acyltransferase NodA CDO28_RS23160 IPR020567 Nodulation protein A, NodA, conserved site CDO28_RS23165 IPR000847 Transcription regulator HTH, LysR CDO28_RS23165 IPR005119 LysR, substrate-binding CDO28_RS23165 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23175 IPR000318 Nitrogenase component 1, conserved site CDO28_RS23175 IPR000510 Nitrogenase/oxidoreductase, component 1 CDO28_RS23175 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein CDO28_RS23180 IPR002539 MaoC-like domain CDO28_RS23180 IPR029069 HotDog domain CDO28_RS23185 IPR001036 Acriflavin resistance protein CDO28_RS23185 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDO28_RS23190 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS23190 IPR032317 CDO28_RS23190 CDO28_RS23195 IPR001347 Sugar isomerase (SIS) CDO28_RS23195 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CDO28_RS23195 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS23200 IPR003738 Protein of unknown function DUF159 CDO28_RS23205 IPR003738 Protein of unknown function DUF159 CDO28_RS23210 IPR017961 DNA polymerase, Y-family, little finger domain CDO28_RS23220 IPR001126 DNA-repair protein, UmuC-like CDO28_RS23225 IPR017026 Inducible mutagenesis protein A CDO28_RS23225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS23230 IPR001126 DNA-repair protein, UmuC-like CDO28_RS23235 IPR003141 Polymerase/histidinol phosphatase, N-terminal CDO28_RS23235 IPR004013 PHP, C-terminal CDO28_RS23235 IPR004805 DNA polymerase III, alpha subunit CDO28_RS23235 IPR011708 Bacterial DNA polymerase III, alpha subunit CDO28_RS23235 IPR016195 Polymerase/histidinol phosphatase-like CDO28_RS23235 IPR023073 DNA polymerase, error-prone CDO28_RS23235 IPR029460 DNA polymerase, helix-hairpin-helix motif CDO28_RS23245 IPR012912 Plasmid pRiA4b, Orf3 CDO28_RS23245 IPR024047 Protein MM3350-like domain CDO28_RS23250 IPR004914 Antirestriction protein CDO28_RS23265 IPR009553 Protein of unknown function DUF1173 CDO28_RS23275 IPR026937 Strawberry notch, helicase C domain CDO28_RS23280 IPR006171 Toprim domain CDO28_RS23285 IPR019627 Mycobacteriophage D29, Gp61 CDO28_RS23300 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDO28_RS23315 IPR007948 Protein of unknown function DUF736 CDO28_RS23325 IPR003688 Ti-type conjugative transfer system, TraG-like CDO28_RS23325 IPR014135 Ti-type conjugative transfer system, TraG CDO28_RS23325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS23330 IPR009444 Conjugal transfer, TraD, alpha-type CDO28_RS23335 IPR012930 TraC-like CDO28_RS23340 IPR005053 MobA/MobL protein CDO28_RS23340 IPR014136 Ti-type conjugative transfer relaxase TraA CDO28_RS23340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS23340 IPR027785 UvrD-like helicase C-terminal domain CDO28_RS23350 IPR006685 Mechanosensitive ion channel MscS CDO28_RS23350 IPR010920 Like-Sm (LSM) domain CDO28_RS23350 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CDO28_RS23350 IPR011066 Mechanosensitive ion channel MscS, C-terminal CDO28_RS23365 IPR021556 Protein of unknown function DUF2950 CDO28_RS23370 IPR021728 Protein of unknown function DUF3300 CDO28_RS23375 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS23375 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS23375 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS23380 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS23380 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS23380 IPR011006 CheY-like superfamily CDO28_RS23380 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23385 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS23385 IPR011006 CheY-like superfamily CDO28_RS23390 IPR000917 Sulfatase CDO28_RS23390 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CDO28_RS23390 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS23400 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CDO28_RS23400 IPR002933 Peptidase M20 CDO28_RS23400 IPR010161 Peptidase M20B, tripeptide aminopeptidase CDO28_RS23400 IPR011650 Peptidase M20, dimerisation domain CDO28_RS23405 IPR019079 Capsule synthesis protein, CapA CDO28_RS23405 IPR029052 Metallo-dependent phosphatase-like CDO28_RS23410 IPR003439 ABC transporter-like CDO28_RS23410 IPR003593 AAA+ ATPase domain CDO28_RS23410 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS23410 IPR017871 ABC transporter, conserved site CDO28_RS23410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS23415 IPR000515 MetI-like domain CDO28_RS23420 IPR000515 MetI-like domain CDO28_RS23425 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS23425 IPR030678 CDO28_RS23425 CDO28_RS23435 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS23435 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS23440 IPR000182 GNAT domain CDO28_RS23440 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS23450 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS23455 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS23455 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CDO28_RS23455 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23455 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS23465 IPR001690 Autoinducer synthesis protein CDO28_RS23465 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS23465 IPR018311 Autoinducer synthesis, conserved site CDO28_RS23480 IPR000847 Transcription regulator HTH, LysR CDO28_RS23480 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23485 IPR005119 LysR, substrate-binding CDO28_RS23490 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS23490 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CDO28_RS23490 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23490 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS23495 IPR025246 Transposase IS30-like HTH domain CDO28_RS23500 IPR009057 Homeodomain-like CDO28_RS23500 IPR012337 Ribonuclease H-like domain CDO28_RS23505 IPR001584 Integrase, catalytic core CDO28_RS23505 IPR009057 Homeodomain-like CDO28_RS23505 IPR012337 Ribonuclease H-like domain CDO28_RS23505 IPR025246 Transposase IS30-like HTH domain CDO28_RS23510 IPR001584 Integrase, catalytic core CDO28_RS23510 IPR009057 Homeodomain-like CDO28_RS23510 IPR012337 Ribonuclease H-like domain CDO28_RS23515 IPR005126 NapC/NirT cytochrome c, N-terminal CDO28_RS23515 IPR011031 Multihaem cytochrome CDO28_RS23525 IPR009057 Homeodomain-like CDO28_RS23525 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS23530 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS23530 IPR016040 NAD(P)-binding domain CDO28_RS23530 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS23535 IPR005545 YCII-related CDO28_RS23535 IPR011008 Dimeric alpha-beta barrel CDO28_RS23540 IPR002823 Protein of unknown function DUF112, transmembrane CDO28_RS23545 IPR009936 Protein of unknown function DUF1468 CDO28_RS23550 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS23550 IPR016040 NAD(P)-binding domain CDO28_RS23550 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS23555 IPR015590 Aldehyde dehydrogenase domain CDO28_RS23555 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS23555 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS23555 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS23555 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS23555 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS23560 IPR005064 Bordetella uptake gene CDO28_RS23565 IPR000847 Transcription regulator HTH, LysR CDO28_RS23565 IPR005119 LysR, substrate-binding CDO28_RS23565 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23570 IPR015590 Aldehyde dehydrogenase domain CDO28_RS23570 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS23570 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS23570 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS23570 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS23575 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS23575 IPR016040 NAD(P)-binding domain CDO28_RS23575 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS23580 IPR005000 HpcH/HpaI aldolase/citrate lyase domain CDO28_RS23580 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS23585 IPR011051 RmlC-like cupin domain CDO28_RS23585 IPR014710 RmlC-like jelly roll fold CDO28_RS23590 IPR011234 Fumarylacetoacetase, C-terminal-related CDO28_RS23590 IPR018833 Domain of unknown function DUF2437 CDO28_RS23595 IPR005064 Bordetella uptake gene CDO28_RS23605 IPR005511 Senescence marker protein-30 (SMP-30) CDO28_RS23605 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS23605 IPR013658 SMP-30/Gluconolactonase/LRE-like region CDO28_RS23610 IPR025997 Periplasmic binding protein domain CDO28_RS23610 IPR028082 Periplasmic binding protein-like I CDO28_RS23615 IPR001851 ABC transporter, permease CDO28_RS23620 IPR001851 ABC transporter, permease CDO28_RS23620 IPR003439 ABC transporter-like CDO28_RS23620 IPR003593 AAA+ ATPase domain CDO28_RS23620 IPR017871 ABC transporter, conserved site CDO28_RS23620 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS23625 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS23625 IPR016040 NAD(P)-binding domain CDO28_RS23625 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS23630 IPR001279 Beta-lactamase-like CDO28_RS23635 IPR002327 Cytochrome c, class IA/ IB CDO28_RS23635 IPR009056 Cytochrome c-like domain CDO28_RS23640 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS23640 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS23640 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CDO28_RS23645 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS23645 IPR002888 [2Fe-2S]-binding CDO28_RS23645 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS23645 IPR012675 Beta-grasp domain CDO28_RS23650 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS23650 IPR029052 Metallo-dependent phosphatase-like CDO28_RS23655 IPR011701 Major facilitator superfamily CDO28_RS23655 IPR020846 Major facilitator superfamily domain CDO28_RS23660 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS23665 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS23665 IPR016040 NAD(P)-binding domain CDO28_RS23670 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS23670 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS23675 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDO28_RS23675 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDO28_RS23675 IPR016166 FAD-binding, type 2 CDO28_RS23675 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS23675 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS23680 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS23680 IPR002888 [2Fe-2S]-binding CDO28_RS23680 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS23680 IPR012675 Beta-grasp domain CDO28_RS23685 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS23690 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS23690 IPR016040 NAD(P)-binding domain CDO28_RS23695 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS23695 IPR013658 SMP-30/Gluconolactonase/LRE-like region CDO28_RS23700 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS23700 IPR029787 Nucleotide cyclase CDO28_RS23715 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS23715 IPR016040 NAD(P)-binding domain CDO28_RS23720 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CDO28_RS23720 IPR024072 Dihydrofolate reductase-like domain CDO28_RS23725 IPR000847 Transcription regulator HTH, LysR CDO28_RS23725 IPR005119 LysR, substrate-binding CDO28_RS23725 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23730 IPR029000 Cyclophilin-like domain CDO28_RS23735 IPR011701 Major facilitator superfamily CDO28_RS23735 IPR020846 Major facilitator superfamily domain CDO28_RS23745 IPR011051 RmlC-like cupin domain CDO28_RS23745 IPR013096 Cupin 2, conserved barrel CDO28_RS23745 IPR014710 RmlC-like jelly roll fold CDO28_RS23750 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS23755 IPR016888 Uncharacterised conserved protein UCP028498 CDO28_RS23760 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CDO28_RS23760 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS23760 IPR012938 Glucose/Sorbosone dehydrogenase CDO28_RS23765 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CDO28_RS23765 IPR024072 Dihydrofolate reductase-like domain CDO28_RS23770 IPR011051 RmlC-like cupin domain CDO28_RS23770 IPR013096 Cupin 2, conserved barrel CDO28_RS23770 IPR014710 RmlC-like jelly roll fold CDO28_RS23790 IPR011547 Sulphate transporter CDO28_RS23795 IPR001765 Carbonic anhydrase CDO28_RS23795 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site CDO28_RS23805 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS23805 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS23805 IPR011006 CheY-like superfamily CDO28_RS23805 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23805 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS23810 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS23810 IPR003660 HAMP linker domain CDO28_RS23810 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS23810 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS23820 IPR002327 Cytochrome c, class IA/ IB CDO28_RS23820 IPR009056 Cytochrome c-like domain CDO28_RS23825 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS23825 IPR002888 [2Fe-2S]-binding CDO28_RS23825 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS23825 IPR012675 Beta-grasp domain CDO28_RS23830 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS23830 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS23830 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CDO28_RS23840 IPR013216 Methyltransferase type 11 CDO28_RS23840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS23845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS23855 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CDO28_RS23855 IPR011032 GroES (chaperonin 10)-like CDO28_RS23855 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS23855 IPR016040 NAD(P)-binding domain CDO28_RS23855 IPR020843 Polyketide synthase, enoylreductase CDO28_RS23860 IPR000683 Oxidoreductase, N-terminal CDO28_RS23860 IPR016040 NAD(P)-binding domain CDO28_RS23865 IPR009959 Polyketide cyclase SnoaL-like domain CDO28_RS23865 IPR032710 CDO28_RS23865 CDO28_RS23870 IPR009057 Homeodomain-like CDO28_RS23870 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS23870 IPR018062 HTH domain AraC-type, conserved site CDO28_RS23870 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS23870 IPR032783 CDO28_RS23870 CDO28_RS23875 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS23875 IPR016040 NAD(P)-binding domain CDO28_RS23880 IPR003787 Sulphur relay, DsrE/F-like protein CDO28_RS23880 IPR027396 DsrEFH-like CDO28_RS23885 IPR001279 Beta-lactamase-like CDO28_RS23890 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS23890 IPR029058 Alpha/Beta hydrolase fold CDO28_RS23895 IPR004370 4-oxalocrotonate tautomerase CDO28_RS23895 IPR014347 Tautomerase/MIF superfamily CDO28_RS23900 IPR011032 GroES (chaperonin 10)-like CDO28_RS23900 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS23900 IPR016040 NAD(P)-binding domain CDO28_RS23900 IPR020843 Polyketide synthase, enoylreductase CDO28_RS23905 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS23905 IPR011990 Tetratricopeptide-like helical domain CDO28_RS23905 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23905 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS23905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS23910 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS23910 IPR016040 NAD(P)-binding domain CDO28_RS23925 IPR006439 HAD hydrolase, subfamily IA CDO28_RS23925 IPR023214 HAD-like domain CDO28_RS23930 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA CDO28_RS23930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS23935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS23940 IPR003346 Transposase, IS116/IS110/IS902 CDO28_RS23945 IPR005829 Sugar transporter, conserved site CDO28_RS23945 IPR011701 Major facilitator superfamily CDO28_RS23945 IPR020846 Major facilitator superfamily domain CDO28_RS23950 IPR023631 Amidase signature domain CDO28_RS23955 IPR000847 Transcription regulator HTH, LysR CDO28_RS23955 IPR005119 LysR, substrate-binding CDO28_RS23955 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS23960 IPR011250 Outer membrane protein/outer membrane enzyme PagP , beta-barrel CDO28_RS23965 IPR001434 Domain of unknown function DUF11 CDO28_RS23965 IPR006626 Parallel beta-helix repeat CDO28_RS23965 IPR006946 Protein of unknown function DUF642 CDO28_RS23965 IPR008962 PapD-like CDO28_RS23965 IPR008979 Galactose-binding domain-like CDO28_RS23965 IPR028974 TSP type-3 repeat CDO28_RS23975 IPR002716 PIN domain CDO28_RS23975 IPR022907 VapC family CDO28_RS23975 IPR029060 PIN domain-like CDO28_RS23980 IPR007159 AbrB-like domain CDO28_RS23990 IPR000847 Transcription regulator HTH, LysR CDO28_RS23990 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24005 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS24010 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative CDO28_RS24015 IPR000847 Transcription regulator HTH, LysR CDO28_RS24015 IPR005119 LysR, substrate-binding CDO28_RS24015 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24020 IPR020471 Aldo/keto reductase subgroup CDO28_RS24020 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS24035 IPR004370 4-oxalocrotonate tautomerase CDO28_RS24035 IPR014347 Tautomerase/MIF superfamily CDO28_RS24040 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS24040 IPR016040 NAD(P)-binding domain CDO28_RS24040 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS24045 IPR000847 Transcription regulator HTH, LysR CDO28_RS24045 IPR005119 LysR, substrate-binding CDO28_RS24045 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24060 IPR005126 NapC/NirT cytochrome c, N-terminal CDO28_RS24060 IPR011031 Multihaem cytochrome CDO28_RS24060 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT CDO28_RS24060 IPR024717 Denitrification system component NapC/NirT/NrfH CDO28_RS24065 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CDO28_RS24065 IPR011031 Multihaem cytochrome CDO28_RS24065 IPR027406 Periplasmic nitrate reductase NapB subunit, heme binding domain CDO28_RS24070 IPR006656 Molybdopterin oxidoreductase CDO28_RS24070 IPR006657 Molydopterin dinucleotide-binding domain CDO28_RS24070 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDO28_RS24070 IPR009010 Aspartate decarboxylase-like domain CDO28_RS24070 IPR010051 Periplasmic nitrate reductase, large subunit CDO28_RS24070 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CDO28_RS24075 IPR005623 Chaperone NapD, nitrate reductase assembly CDO28_RS24080 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS24080 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS24085 IPR004448 Nitrate reductas, NapE, periplasmic CDO28_RS24085 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE CDO28_RS24090 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS24090 IPR009057 Homeodomain-like CDO28_RS24090 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS24090 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS24090 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDO28_RS24095 IPR011701 Major facilitator superfamily CDO28_RS24095 IPR020846 Major facilitator superfamily domain CDO28_RS24100 IPR001482 Type II secretion system protein E CDO28_RS24100 IPR003593 AAA+ ATPase domain CDO28_RS24100 IPR014155 Type IV secretion system protein VirB11 CDO28_RS24100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24105 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CDO28_RS24110 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CDO28_RS24110 IPR014148 P-type conjugative transfer protein VirB9 CDO28_RS24115 IPR007430 Bacterial virulence protein VirB8 CDO28_RS24115 IPR026264 Type IV secretion system protein VirB8/PtlE CDO28_RS24115 IPR032710 CDO28_RS24115 CDO28_RS24125 IPR007688 Conjugal transfer, TrbL/VirB6 CDO28_RS24135 IPR014158 Type IV secretion system, VirB5 CDO28_RS24135 IPR023220 Type IV secretion system, VirB5-domain CDO28_RS24140 IPR003593 AAA+ ATPase domain CDO28_RS24140 IPR004346 CagE, TrbE, VirB component of type IV transporter system CDO28_RS24140 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CDO28_RS24140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24145 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB CDO28_RS24150 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CDO28_RS24155 IPR008258 Lytic transglycosylase-like SLT domain CDO28_RS24165 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24175 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CDO28_RS24175 IPR024072 Dihydrofolate reductase-like domain CDO28_RS24180 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS24180 IPR029058 Alpha/Beta hydrolase fold CDO28_RS24185 IPR005829 Sugar transporter, conserved site CDO28_RS24185 IPR011701 Major facilitator superfamily CDO28_RS24185 IPR020846 Major facilitator superfamily domain CDO28_RS24190 IPR000587 Creatinase, N-terminal CDO28_RS24190 IPR000994 Peptidase M24, structural domain CDO28_RS24190 IPR028980 Creatinase/Aminopeptidase P, N-terminal CDO28_RS24190 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDO28_RS24195 IPR011051 RmlC-like cupin domain CDO28_RS24195 IPR013096 Cupin 2, conserved barrel CDO28_RS24195 IPR014710 RmlC-like jelly roll fold CDO28_RS24200 IPR009215 TIM-barrel domain, IGPS-like CDO28_RS24200 IPR013785 Aldolase-type TIM barrel CDO28_RS24200 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS24205 IPR008322 Uncharacterised protein family UPF0261 CDO28_RS24210 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS24210 IPR009057 Homeodomain-like CDO28_RS24210 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS24210 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDO28_RS24215 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS24220 IPR000515 MetI-like domain CDO28_RS24225 IPR000515 MetI-like domain CDO28_RS24235 IPR003439 ABC transporter-like CDO28_RS24235 IPR003593 AAA+ ATPase domain CDO28_RS24235 IPR005116 Transport-associated OB, type 1 CDO28_RS24235 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS24235 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS24235 IPR017871 ABC transporter, conserved site CDO28_RS24235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24240 IPR003439 ABC transporter-like CDO28_RS24240 IPR003593 AAA+ ATPase domain CDO28_RS24240 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS24240 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS24240 IPR013611 Transport-associated OB, type 2 CDO28_RS24240 IPR017871 ABC transporter, conserved site CDO28_RS24240 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24245 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDO28_RS24245 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS24245 IPR016040 NAD(P)-binding domain CDO28_RS24250 IPR000524 Transcription regulator HTH, GntR CDO28_RS24250 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS24250 IPR011711 GntR, C-terminal CDO28_RS24250 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24255 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDO28_RS24255 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDO28_RS24255 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CDO28_RS24255 IPR029017 Enolase N-terminal domain-like CDO28_RS24255 IPR029065 Enolase C-terminal domain-like CDO28_RS24260 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS24265 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS24270 IPR009597 Domain of unknown function DUF1206 CDO28_RS24275 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS24275 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS24280 IPR022037 Protein of unknown function DUF3606 CDO28_RS24290 IPR000515 MetI-like domain CDO28_RS24295 IPR000515 MetI-like domain CDO28_RS24305 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CDO28_RS24315 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS24315 IPR016040 NAD(P)-binding domain CDO28_RS24320 IPR002781 Transmembrane protein TauE like CDO28_RS24325 IPR003439 ABC transporter-like CDO28_RS24325 IPR003593 AAA+ ATPase domain CDO28_RS24325 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS24325 IPR017871 ABC transporter, conserved site CDO28_RS24325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24330 IPR003439 ABC transporter-like CDO28_RS24330 IPR003593 AAA+ ATPase domain CDO28_RS24330 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS24330 IPR017871 ABC transporter, conserved site CDO28_RS24330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24335 IPR000515 MetI-like domain CDO28_RS24335 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDO28_RS24340 IPR000515 MetI-like domain CDO28_RS24345 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS24345 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CDO28_RS24345 IPR030678 CDO28_RS24345 CDO28_RS24350 IPR020556 Amidase, conserved site CDO28_RS24350 IPR023631 Amidase signature domain CDO28_RS24360 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS24360 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CDO28_RS24360 IPR030678 CDO28_RS24360 CDO28_RS24365 IPR016040 NAD(P)-binding domain CDO28_RS24365 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B CDO28_RS24365 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS24370 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS24370 IPR012675 Beta-grasp domain CDO28_RS24375 IPR006076 FAD dependent oxidoreductase CDO28_RS24375 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS24380 IPR000847 Transcription regulator HTH, LysR CDO28_RS24380 IPR005119 LysR, substrate-binding CDO28_RS24380 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24385 IPR001308 Electron transfer flavoprotein, alpha subunit CDO28_RS24385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS24385 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDO28_RS24385 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CDO28_RS24385 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site CDO28_RS24385 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS24390 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CDO28_RS24390 IPR012255 Electron transfer flavoprotein, beta subunit CDO28_RS24390 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS24390 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CDO28_RS24395 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS24400 IPR009334 Protein of unknown function DUF993 CDO28_RS24400 IPR013785 Aldolase-type TIM barrel CDO28_RS24405 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS24405 IPR016040 NAD(P)-binding domain CDO28_RS24405 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS24410 IPR006089 Acyl-CoA dehydrogenase, conserved site CDO28_RS24410 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDO28_RS24410 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDO28_RS24410 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CDO28_RS24410 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDO28_RS24415 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS24420 IPR007835 MOFRL domain CDO28_RS24420 IPR025286 MOFRL-associated domain CDO28_RS24425 IPR001753 Crotonase superfamily CDO28_RS24425 IPR029045 ClpP/crotonase-like domain CDO28_RS24430 IPR004165 Coenzyme A transferase family I CDO28_RS24430 IPR014388 3-oxoacid CoA-transferase CDO28_RS24435 IPR018170 Aldo/keto reductase, conserved site CDO28_RS24435 IPR020471 Aldo/keto reductase subgroup CDO28_RS24435 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS24445 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor CDO28_RS24450 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CDO28_RS24450 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CDO28_RS24450 IPR012132 Glucose-methanol-choline oxidoreductase CDO28_RS24450 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS24455 IPR015590 Aldehyde dehydrogenase domain CDO28_RS24455 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS24455 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS24455 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS24455 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS24460 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS24460 IPR011032 GroES (chaperonin 10)-like CDO28_RS24460 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS24460 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS24460 IPR016040 NAD(P)-binding domain CDO28_RS24465 IPR001851 ABC transporter, permease CDO28_RS24465 IPR029022 ABC transporter, BtuC-like CDO28_RS24470 IPR003439 ABC transporter-like CDO28_RS24470 IPR003593 AAA+ ATPase domain CDO28_RS24470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24475 IPR001851 ABC transporter, permease CDO28_RS24480 IPR025997 Periplasmic binding protein domain CDO28_RS24480 IPR028082 Periplasmic binding protein-like I CDO28_RS24485 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS24485 IPR009057 Homeodomain-like CDO28_RS24485 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS24485 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS24495 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS24500 IPR003439 ABC transporter-like CDO28_RS24500 IPR003593 AAA+ ATPase domain CDO28_RS24500 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS24500 IPR017871 ABC transporter, conserved site CDO28_RS24500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24505 IPR000515 MetI-like domain CDO28_RS24510 IPR000515 MetI-like domain CDO28_RS24515 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS24515 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CDO28_RS24515 IPR030678 CDO28_RS24515 CDO28_RS24520 IPR002220 DapA-like CDO28_RS24520 IPR013785 Aldolase-type TIM barrel CDO28_RS24520 IPR017655 5-dehydro-4-deoxyglucarate dehydratase CDO28_RS24525 IPR000524 Transcription regulator HTH, GntR CDO28_RS24525 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS24525 IPR011711 GntR, C-terminal CDO28_RS24525 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24535 IPR005829 Sugar transporter, conserved site CDO28_RS24535 IPR011701 Major facilitator superfamily CDO28_RS24535 IPR020846 Major facilitator superfamily domain CDO28_RS24545 IPR002155 Thiolase CDO28_RS24545 IPR016039 Thiolase-like CDO28_RS24545 IPR020610 Thiolase, active site CDO28_RS24545 IPR020616 Thiolase, N-terminal CDO28_RS24545 IPR020617 Thiolase, C-terminal CDO28_RS24550 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS24550 IPR016040 NAD(P)-binding domain CDO28_RS24550 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS24555 IPR009057 Homeodomain-like CDO28_RS24555 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS24555 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS24555 IPR032687 CDO28_RS24555 CDO28_RS24560 IPR014914 RES CDO28_RS24565 IPR024467 Domain of unknown function DUF2384 CDO28_RS24570 IPR003767 Malate/L-lactate dehydrogenase CDO28_RS24575 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDO28_RS24575 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDO28_RS24575 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CDO28_RS24575 IPR029017 Enolase N-terminal domain-like CDO28_RS24575 IPR029065 Enolase C-terminal domain-like CDO28_RS24580 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CDO28_RS24585 IPR000515 MetI-like domain CDO28_RS24590 IPR000644 CBS domain CDO28_RS24590 IPR003439 ABC transporter-like CDO28_RS24590 IPR003593 AAA+ ATPase domain CDO28_RS24590 IPR005892 Glycine betaine transport ATP-binding subunit CDO28_RS24590 IPR017871 ABC transporter, conserved site CDO28_RS24590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24595 IPR000515 MetI-like domain CDO28_RS24600 IPR000868 Isochorismatase-like CDO28_RS24605 IPR000587 Creatinase, N-terminal CDO28_RS24605 IPR000994 Peptidase M24, structural domain CDO28_RS24605 IPR028980 Creatinase/Aminopeptidase P, N-terminal CDO28_RS24605 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDO28_RS24610 IPR002818 ThiJ/PfpI CDO28_RS24610 IPR009057 Homeodomain-like CDO28_RS24610 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS24610 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS24610 IPR029062 Class I glutamine amidotransferase-like CDO28_RS24615 IPR010426 Trimethylamine methyltransferase CDO28_RS24620 IPR000847 Transcription regulator HTH, LysR CDO28_RS24620 IPR005119 LysR, substrate-binding CDO28_RS24620 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24625 IPR006076 FAD dependent oxidoreductase CDO28_RS24625 IPR006222 Glycine cleavage T-protein, N-terminal CDO28_RS24625 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDO28_RS24625 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS24625 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDO28_RS24625 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CDO28_RS24625 IPR032503 CDO28_RS24625 CDO28_RS24635 IPR002327 Cytochrome c, class IA/ IB CDO28_RS24635 IPR009056 Cytochrome c-like domain CDO28_RS24640 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS24640 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS24640 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CDO28_RS24645 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS24645 IPR002888 [2Fe-2S]-binding CDO28_RS24645 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS24645 IPR012675 Beta-grasp domain CDO28_RS24650 IPR000847 Transcription regulator HTH, LysR CDO28_RS24650 IPR005119 LysR, substrate-binding CDO28_RS24650 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24660 IPR000192 Aminotransferase class V domain CDO28_RS24660 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS24660 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS24660 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS24660 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase CDO28_RS24665 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS24665 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS24665 IPR012336 Thioredoxin-like fold CDO28_RS24670 IPR000951 Phthalate dioxygenase reductase CDO28_RS24670 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS24670 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS24670 IPR012675 Beta-grasp domain CDO28_RS24670 IPR017938 Riboflavin synthase-like beta-barrel CDO28_RS24670 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS24685 IPR000524 Transcription regulator HTH, GntR CDO28_RS24685 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS24685 IPR011711 GntR, C-terminal CDO28_RS24685 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24690 IPR003760 Basic membrane lipoprotein CDO28_RS24690 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDO28_RS24695 IPR003439 ABC transporter-like CDO28_RS24695 IPR003593 AAA+ ATPase domain CDO28_RS24695 IPR017871 ABC transporter, conserved site CDO28_RS24695 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24700 IPR001851 ABC transporter, permease CDO28_RS24705 IPR001851 ABC transporter, permease CDO28_RS24715 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H CDO28_RS24715 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site CDO28_RS24720 IPR010226 NADH-quinone oxidoreductase, chain I CDO28_RS24720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS24720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS24725 IPR000644 CBS domain CDO28_RS24730 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site CDO28_RS24730 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS24730 IPR006656 Molybdopterin oxidoreductase CDO28_RS24730 IPR006657 Molydopterin dinucleotide-binding domain CDO28_RS24730 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDO28_RS24730 IPR009010 Aspartate decarboxylase-like domain CDO28_RS24730 IPR010228 NADH:ubiquinone oxidoreductase, subunit G CDO28_RS24730 IPR012675 Beta-grasp domain CDO28_RS24730 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CDO28_RS24730 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CDO28_RS24730 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CDO28_RS24730 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CDO28_RS24735 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CDO28_RS24735 IPR011537 NADH ubiquinone oxidoreductase, F subunit CDO28_RS24735 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CDO28_RS24735 IPR019554 Soluble ligand binding domain CDO28_RS24735 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding CDO28_RS24740 IPR002023 NADH-quinone oxidoreductase subunit E-like CDO28_RS24740 IPR012336 Thioredoxin-like fold CDO28_RS24745 IPR001135 NADH-quinone oxidoreductase, subunit D CDO28_RS24745 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H CDO28_RS24745 IPR029014 NiFe hydrogenase-like CDO28_RS24750 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit CDO28_RS24750 IPR010218 NADH dehydrogenase, subunit C CDO28_RS24750 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site CDO28_RS24755 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CDO28_RS24755 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit CDO28_RS24760 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 CDO28_RS24760 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid CDO28_RS24765 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CDO28_RS24765 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 CDO28_RS24770 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CDO28_RS24770 IPR003918 NADH:ubiquinone oxidoreductase CDO28_RS24770 IPR010227 NADH-quinone oxidoreductase, chain M/4 CDO28_RS24775 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CDO28_RS24785 IPR001516 NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal CDO28_RS24785 IPR001750 NADH:ubiquinone/plastoquinone oxidoreductase CDO28_RS24790 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K CDO28_RS24795 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 CDO28_RS24800 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CDO28_RS24800 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS24805 IPR000014 PAS domain CDO28_RS24805 IPR000160 GGDEF domain CDO28_RS24805 IPR001610 PAC motif CDO28_RS24805 IPR001633 EAL domain CDO28_RS24805 IPR013655 PAS fold-3 CDO28_RS24805 IPR013656 PAS fold-4 CDO28_RS24805 IPR029787 Nucleotide cyclase CDO28_RS24810 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS24810 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS24810 IPR011006 CheY-like superfamily CDO28_RS24810 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24810 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS24815 IPR000780 MCP methyltransferase, CheR-type CDO28_RS24815 IPR011990 Tetratricopeptide-like helical domain CDO28_RS24815 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal CDO28_RS24815 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CDO28_RS24815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS24820 IPR002545 CheW-like protein CDO28_RS24825 IPR003660 HAMP linker domain CDO28_RS24825 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CDO28_RS24830 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS24830 IPR002545 CheW-like protein CDO28_RS24830 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS24830 IPR004105 Histidine kinase CheA-like, homodimeric domain CDO28_RS24830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS24830 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CDO28_RS24830 IPR011006 CheY-like superfamily CDO28_RS24835 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CDO28_RS24835 IPR008248 Signal transduction response regulator, chemotaxis, CheB CDO28_RS24835 IPR011006 CheY-like superfamily CDO28_RS24840 IPR018076 Type II secretion system F domain CDO28_RS24845 IPR018076 Type II secretion system F domain CDO28_RS24850 IPR001482 Type II secretion system protein E CDO28_RS24850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24855 IPR007047 Flp/Fap pilin component CDO28_RS24860 IPR012495 TadE-like CDO28_RS24865 IPR011006 CheY-like superfamily CDO28_RS24865 IPR012495 TadE-like CDO28_RS24865 IPR025669 AAA domain CDO28_RS24865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24870 IPR013974 SAF domain CDO28_RS24870 IPR017592 Pilus assembly, Flp-type CpaB CDO28_RS24870 IPR031571 CDO28_RS24870 CDO28_RS24875 IPR000045 Prepilin type IV endopeptidase, peptidase domain CDO28_RS24880 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal CDO28_RS24885 IPR032789 CDO28_RS24885 CDO28_RS24890 IPR006685 Mechanosensitive ion channel MscS CDO28_RS24890 IPR010920 Like-Sm (LSM) domain CDO28_RS24890 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CDO28_RS24890 IPR011066 Mechanosensitive ion channel MscS, C-terminal CDO28_RS24895 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS24895 IPR011990 Tetratricopeptide-like helical domain CDO28_RS24895 IPR019734 Tetratricopeptide repeat CDO28_RS24895 IPR029787 Nucleotide cyclase CDO28_RS24910 IPR002514 Transposase IS3/IS911family CDO28_RS24910 IPR009057 Homeodomain-like CDO28_RS24910 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24915 IPR000757 Glycoside hydrolase, family 16 CDO28_RS24915 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS24915 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CDO28_RS24930 IPR009959 Polyketide cyclase SnoaL-like domain CDO28_RS24930 IPR032710 CDO28_RS24930 CDO28_RS24935 IPR003812 Fido domain CDO28_RS24940 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS24940 IPR001660 Sterile alpha motif domain CDO28_RS24940 IPR011990 Tetratricopeptide-like helical domain CDO28_RS24940 IPR013761 Sterile alpha motif/pointed domain CDO28_RS24940 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS24940 IPR029787 Nucleotide cyclase CDO28_RS24945 IPR005805 Rieske iron-sulphur protein, C-terminal CDO28_RS24945 IPR006076 FAD dependent oxidoreductase CDO28_RS24945 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS24945 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS24965 IPR008962 PapD-like CDO28_RS24965 IPR016147 PapD, N-terminal, bacterial CDO28_RS24970 IPR003148 Regulator of K+ conductance, N-terminal CDO28_RS24970 IPR006153 Cation/H+ exchanger CDO28_RS24970 IPR016040 NAD(P)-binding domain CDO28_RS24975 IPR000847 Transcription regulator HTH, LysR CDO28_RS24975 IPR005119 LysR, substrate-binding CDO28_RS24975 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS24980 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDO28_RS24980 IPR013785 Aldolase-type TIM barrel CDO28_RS24985 IPR016040 NAD(P)-binding domain CDO28_RS24995 IPR000847 Transcription regulator HTH, LysR CDO28_RS24995 IPR005119 LysR, substrate-binding CDO28_RS24995 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS25000 IPR010323 Protein of unknown function DUF924 CDO28_RS25000 IPR011990 Tetratricopeptide-like helical domain CDO28_RS25005 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS25005 IPR016040 NAD(P)-binding domain CDO28_RS25005 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS25010 IPR009959 Polyketide cyclase SnoaL-like domain CDO28_RS25010 IPR032710 CDO28_RS25010 CDO28_RS25015 IPR000847 Transcription regulator HTH, LysR CDO28_RS25015 IPR005119 LysR, substrate-binding CDO28_RS25015 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS25050 IPR000182 GNAT domain CDO28_RS25050 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS25055 IPR001036 Acriflavin resistance protein CDO28_RS25055 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CDO28_RS25055 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDO28_RS25060 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS25060 IPR032317 CDO28_RS25060 CDO28_RS25065 IPR005134 Uncharacterised protein family UPF0114 CDO28_RS25070 IPR002293 Amino acid/polyamine transporter I CDO28_RS25070 IPR004754 Amino acid antiporter CDO28_RS25075 IPR002293 Amino acid/polyamine transporter I CDO28_RS25075 IPR004754 Amino acid antiporter CDO28_RS25080 IPR003876 Arginine deiminase CDO28_RS25085 IPR008816 Glycine zipper 2TM domain CDO28_RS25090 IPR009200 Protein of unknown function DUF1269, membrane associated CDO28_RS25100 IPR005325 Protein of unknown function DUF308, membrane CDO28_RS25105 IPR002549 Uncharacterised protein family UPF0118 CDO28_RS25110 IPR006680 Amidohydrolase 1 CDO28_RS25110 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS25110 IPR032466 CDO28_RS25110 CDO28_RS25115 IPR011066 Mechanosensitive ion channel MscS, C-terminal CDO28_RS25130 IPR010297 Protein of unknown function DUF900, hydrolase-like CDO28_RS25130 IPR014586 Uncharacterised conserved protein UCP033909 CDO28_RS25130 IPR029058 Alpha/Beta hydrolase fold CDO28_RS25135 IPR010177 Doubled CXXCH motif CDO28_RS25135 IPR011031 Multihaem cytochrome CDO28_RS25135 IPR011990 Tetratricopeptide-like helical domain CDO28_RS25135 IPR019734 Tetratricopeptide repeat CDO28_RS25135 IPR023155 Cytochrome c-552/4 CDO28_RS25140 IPR023214 HAD-like domain CDO28_RS25145 IPR000917 Sulfatase CDO28_RS25145 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CDO28_RS25145 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS25150 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS25150 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS25150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS25155 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS25155 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS25155 IPR011006 CheY-like superfamily CDO28_RS25155 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS25155 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS25160 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS25160 IPR011006 CheY-like superfamily CDO28_RS25165 IPR010621 Domain of unknown function DUF1214 CDO28_RS25175 IPR005064 Bordetella uptake gene CDO28_RS25185 IPR002514 Transposase IS3/IS911family CDO28_RS25185 IPR009057 Homeodomain-like CDO28_RS25210 IPR010640 Low temperature requirement A CDO28_RS25215 IPR008807 ROSMUCR transcriptional regulator CDO28_RS25220 IPR006035 Ureohydrolase CDO28_RS25220 IPR023696 Ureohydrolase domain CDO28_RS25230 IPR006679 Adenine deaminase CDO28_RS25230 IPR006680 Amidohydrolase 1 CDO28_RS25230 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS25230 IPR026912 Adenine deaminase C-terminal domain CDO28_RS25230 IPR032466 CDO28_RS25230 CDO28_RS25235 IPR006043 Xanthine/uracil/vitamin C permease CDO28_RS25240 IPR006679 Adenine deaminase CDO28_RS25240 IPR006680 Amidohydrolase 1 CDO28_RS25240 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS25240 IPR026912 Adenine deaminase C-terminal domain CDO28_RS25240 IPR032466 CDO28_RS25240 CDO28_RS25245 IPR000847 Transcription regulator HTH, LysR CDO28_RS25245 IPR005119 LysR, substrate-binding CDO28_RS25245 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS25255 IPR000868 Isochorismatase-like CDO28_RS25260 IPR002818 ThiJ/PfpI CDO28_RS25260 IPR009057 Homeodomain-like CDO28_RS25260 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS25260 IPR029062 Class I glutamine amidotransferase-like CDO28_RS25265 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS25265 IPR009057 Homeodomain-like CDO28_RS25265 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS25265 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS25265 IPR017757 Transcriptional repressor BetI CDO28_RS25270 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS25270 IPR029058 Alpha/Beta hydrolase fold CDO28_RS25275 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CDO28_RS25280 IPR011264 NAD/NADP-dependent betaine aldehyde dehydrogenase CDO28_RS25280 IPR015590 Aldehyde dehydrogenase domain CDO28_RS25280 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS25280 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS25280 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS25280 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS25280 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS25285 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS25290 IPR006680 Amidohydrolase 1 CDO28_RS25290 IPR032466 CDO28_RS25290 CDO28_RS25295 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS25295 IPR001221 Phenol hydroxylase reductase CDO28_RS25295 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDO28_RS25295 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDO28_RS25295 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS25295 IPR008333 Oxidoreductase, FAD-binding domain CDO28_RS25295 IPR012675 Beta-grasp domain CDO28_RS25295 IPR017938 Riboflavin synthase-like beta-barrel CDO28_RS25300 IPR000847 Transcription regulator HTH, LysR CDO28_RS25300 IPR005119 LysR, substrate-binding CDO28_RS25300 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS25305 IPR018383 Uncharacterised protein family UPF0324, prokaryote CDO28_RS25315 IPR013216 Methyltransferase type 11 CDO28_RS25315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS25320 IPR007037 Siderophore-interacting protein CDO28_RS25320 IPR013113 FAD-binding 9, siderophore-interacting CDO28_RS25320 IPR014543 Uncharacterised conserved protein UCP028291 CDO28_RS25320 IPR017938 Riboflavin synthase-like beta-barrel CDO28_RS25325 IPR003439 ABC transporter-like CDO28_RS25325 IPR003593 AAA+ ATPase domain CDO28_RS25325 IPR017871 ABC transporter, conserved site CDO28_RS25325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS25330 IPR000522 ABC transporter, permease protein CDO28_RS25330 IPR029022 ABC transporter, BtuC-like CDO28_RS25335 IPR000522 ABC transporter, permease protein CDO28_RS25335 IPR029022 ABC transporter, BtuC-like CDO28_RS25340 IPR002491 ABC transporter periplasmic binding domain CDO28_RS25345 IPR000531 TonB-dependent receptor, beta-barrel CDO28_RS25345 IPR010105 TonB-dependent siderophore receptor CDO28_RS25345 IPR012910 TonB-dependent receptor, plug CDO28_RS25350 IPR009057 Homeodomain-like CDO28_RS25350 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS25350 IPR018062 HTH domain AraC-type, conserved site CDO28_RS25365 IPR000515 MetI-like domain CDO28_RS25370 IPR000515 MetI-like domain CDO28_RS25375 IPR003439 ABC transporter-like CDO28_RS25375 IPR003593 AAA+ ATPase domain CDO28_RS25375 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CDO28_RS25375 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS25375 IPR013611 Transport-associated OB, type 2 CDO28_RS25375 IPR017871 ABC transporter, conserved site CDO28_RS25375 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS25385 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS25385 IPR016040 NAD(P)-binding domain CDO28_RS25385 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS25390 IPR000524 Transcription regulator HTH, GntR CDO28_RS25390 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS25390 IPR011711 GntR, C-terminal CDO28_RS25390 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS25395 IPR002575 Aminoglycoside phosphotransferase CDO28_RS25395 IPR011009 Protein kinase-like domain CDO28_RS25400 IPR005814 Aminotransferase class-III CDO28_RS25400 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS25400 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS25400 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS25410 IPR009282 Protein of unknown function DUF937 CDO28_RS25410 IPR027405 YidB-like CDO28_RS25415 IPR007341 Transglycosylase-associated protein CDO28_RS25445 IPR010297 Protein of unknown function DUF900, hydrolase-like CDO28_RS25445 IPR014586 Uncharacterised conserved protein UCP033909 CDO28_RS25445 IPR029058 Alpha/Beta hydrolase fold CDO28_RS25455 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS25455 IPR016040 NAD(P)-binding domain CDO28_RS25460 IPR007896 Transmembrane pair, bacterial CDO28_RS25465 IPR000847 Transcription regulator HTH, LysR CDO28_RS25465 IPR005119 LysR, substrate-binding CDO28_RS25465 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS25470 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS25470 IPR001660 Sterile alpha motif domain CDO28_RS25470 IPR013761 Sterile alpha motif/pointed domain CDO28_RS25470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS25470 IPR029787 Nucleotide cyclase CDO28_RS25480 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS25480 IPR009057 Homeodomain-like CDO28_RS25480 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS25480 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS25480 IPR025996 WHG domain CDO28_RS25490 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS25490 IPR011057 Mss4-like CDO28_RS25495 IPR011051 RmlC-like cupin domain CDO28_RS25495 IPR014710 RmlC-like jelly roll fold CDO28_RS25515 IPR003855 K+ potassium transporter CDO28_RS25515 IPR023051 Potassium uptake protein, low affinity, Kup CDO28_RS25545 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS25545 IPR029058 Alpha/Beta hydrolase fold CDO28_RS25550 IPR001279 Beta-lactamase-like CDO28_RS25555 IPR010290 Transmembrane secretion effector CDO28_RS25555 IPR020846 Major facilitator superfamily domain CDO28_RS25560 IPR032808 CDO28_RS25560 CDO28_RS25565 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS25565 IPR013108 Amidohydrolase 3 CDO28_RS25565 IPR032466 CDO28_RS25565 CDO28_RS25570 IPR009872 Protein of unknown function DUF1427 CDO28_RS25570 IPR020017 XapX domain CDO28_RS25575 IPR000868 Isochorismatase-like CDO28_RS25580 IPR009057 Homeodomain-like CDO28_RS25580 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS25580 IPR018062 HTH domain AraC-type, conserved site CDO28_RS25580 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS25585 IPR009057 Homeodomain-like CDO28_RS25585 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS25590 IPR009057 Homeodomain-like CDO28_RS25590 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS25590 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS25605 IPR029058 Alpha/Beta hydrolase fold CDO28_RS25615 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CDO28_RS25615 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS25615 IPR012938 Glucose/Sorbosone dehydrogenase CDO28_RS25620 IPR000182 GNAT domain CDO28_RS25620 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS25625 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CDO28_RS25625 IPR002933 Peptidase M20 CDO28_RS25625 IPR010169 Acetylornithine deacetylase (ArgE) CDO28_RS25625 IPR011650 Peptidase M20, dimerisation domain CDO28_RS25630 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS25630 IPR016040 NAD(P)-binding domain CDO28_RS25635 IPR008579 Domain of unknown function DUF861, cupin-3 CDO28_RS25635 IPR011051 RmlC-like cupin domain CDO28_RS25635 IPR014710 RmlC-like jelly roll fold CDO28_RS25640 IPR015590 Aldehyde dehydrogenase domain CDO28_RS25640 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS25640 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS25640 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS25640 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS25640 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS25645 IPR011829 Tartrate dehydrogenase CDO28_RS25645 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CDO28_RS25645 IPR024084 Isopropylmalate dehydrogenase-like domain CDO28_RS25650 IPR010102 Succinate semialdehyde dehydrogenase CDO28_RS25650 IPR015590 Aldehyde dehydrogenase domain CDO28_RS25650 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS25650 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS25650 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS25650 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS25650 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS25655 IPR006076 FAD dependent oxidoreductase CDO28_RS25655 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS25660 IPR006328 Haloacid dehalogenase, type II CDO28_RS25660 IPR006439 HAD hydrolase, subfamily IA CDO28_RS25660 IPR023214 HAD-like domain CDO28_RS25665 IPR000182 GNAT domain CDO28_RS25665 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS25670 IPR005814 Aminotransferase class-III CDO28_RS25670 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS25670 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS25670 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS25675 IPR006439 HAD hydrolase, subfamily IA CDO28_RS25675 IPR023214 HAD-like domain CDO28_RS25680 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS25680 IPR030678 CDO28_RS25680 CDO28_RS25685 IPR000515 MetI-like domain CDO28_RS25690 IPR000515 MetI-like domain CDO28_RS25690 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDO28_RS25695 IPR003439 ABC transporter-like CDO28_RS25695 IPR003593 AAA+ ATPase domain CDO28_RS25695 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS25695 IPR017871 ABC transporter, conserved site CDO28_RS25695 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS25700 IPR000485 AsnC-type HTH domain CDO28_RS25700 IPR011008 Dimeric alpha-beta barrel CDO28_RS25700 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS25700 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CDO28_RS25700 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS25700 IPR019888 Transcription regulator AsnC-type CDO28_RS25705 IPR006076 FAD dependent oxidoreductase CDO28_RS25705 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS25715 IPR003462 Ornithine cyclodeaminase/mu-crystallin CDO28_RS25715 IPR016040 NAD(P)-binding domain CDO28_RS25715 IPR023401 Ornithine cyclodeaminase, N-terminal CDO28_RS25720 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CDO28_RS25720 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDO28_RS25725 IPR002104 Integrase, catalytic CDO28_RS25725 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS25725 IPR013762 Integrase-like, catalytic core CDO28_RS25735 IPR011992 EF-hand domain pair CDO28_RS25735 IPR018247 EF-Hand 1, calcium-binding site CDO28_RS25745 IPR003439 ABC transporter-like CDO28_RS25745 IPR003593 AAA+ ATPase domain CDO28_RS25745 IPR005074 Peptidase C39, bacteriocin processing CDO28_RS25745 IPR010132 ATPase, type I secretion system, HlyB CDO28_RS25745 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS25745 IPR017871 ABC transporter, conserved site CDO28_RS25745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS25750 IPR003997 RTX secretion protein D, Gram-negative bacteria CDO28_RS25750 IPR006144 Secretion protein HlyD, conserved site CDO28_RS25750 IPR010129 Type I secretion membrane fusion protein, HlyD CDO28_RS25755 IPR002104 Integrase, catalytic CDO28_RS25755 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS25755 IPR013762 Integrase-like, catalytic core CDO28_RS25760 IPR002491 ABC transporter periplasmic binding domain CDO28_RS25765 IPR000522 ABC transporter, permease protein CDO28_RS25765 IPR029022 ABC transporter, BtuC-like CDO28_RS25770 IPR000522 ABC transporter, permease protein CDO28_RS25770 IPR029022 ABC transporter, BtuC-like CDO28_RS25775 IPR003439 ABC transporter-like CDO28_RS25775 IPR003593 AAA+ ATPase domain CDO28_RS25775 IPR017871 ABC transporter, conserved site CDO28_RS25775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS25780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS25785 IPR002104 Integrase, catalytic CDO28_RS25785 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS25785 IPR013762 Integrase-like, catalytic core CDO28_RS25805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS25810 IPR000182 GNAT domain CDO28_RS25810 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS25815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS25820 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS25825 IPR009799 EthD domain CDO28_RS25825 IPR011008 Dimeric alpha-beta barrel CDO28_RS25835 IPR001757 Cation-transporting P-type ATPase CDO28_RS25835 IPR008250 P-type ATPase, A domain CDO28_RS25835 IPR018303 P-type ATPase, phosphorylation site CDO28_RS25835 IPR023214 HAD-like domain CDO28_RS25835 IPR023299 P-type ATPase, cytoplasmic domain N CDO28_RS25835 IPR027256 Cation-transporting P-type ATPase, subfamily IB CDO28_RS25840 IPR002489 Glutamate synthase, alpha subunit, C-terminal CDO28_RS25855 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CDO28_RS25855 IPR009056 Cytochrome c-like domain CDO28_RS25860 IPR000883 Cytochrome c oxidase subunit I CDO28_RS25860 IPR023616 Cytochrome c oxidase, subunit I domain CDO28_RS25875 IPR001844 Chaperonin Cpn60 CDO28_RS25875 IPR002423 Chaperonin Cpn60/TCP-1 CDO28_RS25875 IPR018370 Chaperonin Cpn60, conserved site CDO28_RS25875 IPR027409 GroEL-like apical domain CDO28_RS25875 IPR027413 GroEL-like equatorial domain CDO28_RS25880 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CDO28_RS25880 IPR004839 Aminotransferase, class I/classII CDO28_RS25880 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase CDO28_RS25880 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS25880 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS25880 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS25885 IPR003782 Copper chaperone SCO1/SenC CDO28_RS25885 IPR012336 Thioredoxin-like fold CDO28_RS25890 IPR008969 Carboxypeptidase-like, regulatory domain CDO28_RS25890 IPR008972 Cupredoxin CDO28_RS25890 IPR014766 Carboxypeptidase, regulatory domain CDO28_RS25895 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS25895 IPR029052 Metallo-dependent phosphatase-like CDO28_RS25900 IPR009056 Cytochrome c-like domain CDO28_RS25910 IPR015323 Flavocytochrome c sulphide dehydrogenase, flavin-binding CDO28_RS25910 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS25910 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS25915 IPR009056 Cytochrome c-like domain CDO28_RS25920 IPR013783 Immunoglobulin-like fold CDO28_RS25920 IPR014756 Immunoglobulin E-set CDO28_RS25920 IPR014880 Sulphur oxidation protein SoxZ CDO28_RS25920 IPR030995 CDO28_RS25920 CDO28_RS25925 IPR016568 Sulphur oxidation, SoxY CDO28_RS25925 IPR032711 CDO28_RS25925 CDO28_RS25930 IPR000524 Transcription regulator HTH, GntR CDO28_RS25930 IPR004839 Aminotransferase, class I/classII CDO28_RS25930 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS25930 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS25930 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS25935 IPR011051 RmlC-like cupin domain CDO28_RS25935 IPR013096 Cupin 2, conserved barrel CDO28_RS25935 IPR014710 RmlC-like jelly roll fold CDO28_RS25940 IPR003779 Carboxymuconolactone decarboxylase-like CDO28_RS25940 IPR004675 Alkylhydroperoxidase AhpD core CDO28_RS25940 IPR029032 AhpD-like CDO28_RS25945 IPR016040 NAD(P)-binding domain CDO28_RS25955 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS25955 IPR009057 Homeodomain-like CDO28_RS25955 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS25955 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS25960 IPR009506 Protein of unknown function DUF1127 CDO28_RS25965 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CDO28_RS25965 IPR005982 Thioredoxin reductase CDO28_RS25965 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CDO28_RS25965 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS25970 IPR000847 Transcription regulator HTH, LysR CDO28_RS25970 IPR005119 LysR, substrate-binding CDO28_RS25970 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS25975 IPR002579 Peptide methionine sulphoxide reductase MrsB CDO28_RS25975 IPR011057 Mss4-like CDO28_RS25980 IPR002569 Peptide methionine sulphoxide reductase MsrA CDO28_RS25985 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CDO28_RS25995 IPR005064 Bordetella uptake gene CDO28_RS26000 IPR012309 DNA ligase, ATP-dependent, C-terminal CDO28_RS26000 IPR012310 DNA ligase, ATP-dependent, central CDO28_RS26000 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS26000 IPR014143 DNA ligase D CDO28_RS26000 IPR014146 DNA polymerase LigD, ligase domain CDO28_RS26010 IPR028992 Hedgehog/Intein (Hint) domain CDO28_RS26025 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS26025 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS26030 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CDO28_RS26065 IPR025568 Domain of unknown function DUF4334 CDO28_RS26065 IPR025951 GXWXG domain CDO28_RS26070 IPR003231 Acyl carrier protein (ACP) CDO28_RS26070 IPR006162 Phosphopantetheine attachment site CDO28_RS26070 IPR009081 Acyl carrier protein-like CDO28_RS26075 IPR009444 Conjugal transfer, TraD, alpha-type CDO28_RS26080 IPR012930 TraC-like CDO28_RS26085 IPR005053 MobA/MobL protein CDO28_RS26085 IPR014136 Ti-type conjugative transfer relaxase TraA CDO28_RS26085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26085 IPR027785 UvrD-like helicase C-terminal domain CDO28_RS26095 IPR003673 CoA-transferase family III CDO28_RS26095 IPR023606 CoA-transferase family III domain CDO28_RS26105 IPR002053 Glycoside hydrolase, family 25 CDO28_RS26105 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS26105 IPR017853 Glycoside hydrolase, superfamily CDO28_RS26105 IPR018077 Glycoside hydrolase, family 25 subgroup CDO28_RS26110 IPR000182 GNAT domain CDO28_RS26110 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS26115 IPR000847 Transcription regulator HTH, LysR CDO28_RS26115 IPR005119 LysR, substrate-binding CDO28_RS26115 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS26120 IPR000362 Fumarate lyase family CDO28_RS26120 IPR008948 L-Aspartase-like CDO28_RS26120 IPR009049 Argininosuccinate lyase CDO28_RS26120 IPR020557 Fumarate lyase, conserved site CDO28_RS26120 IPR022761 Fumarate lyase, N-terminal CDO28_RS26120 IPR024083 Fumarase/histidase, N-terminal CDO28_RS26120 IPR029419 Argininosuccinate lyase, C-terminal CDO28_RS26125 IPR000515 MetI-like domain CDO28_RS26125 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS26130 IPR003439 ABC transporter-like CDO28_RS26130 IPR003593 AAA+ ATPase domain CDO28_RS26130 IPR017871 ABC transporter, conserved site CDO28_RS26130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26130 IPR030679 CDO28_RS26130 CDO28_RS26135 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS26140 IPR005656 MmgE/PrpD CDO28_RS26145 IPR002509 Polysaccharide deacetylase CDO28_RS26145 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS26155 IPR006680 Amidohydrolase 1 CDO28_RS26155 IPR032466 CDO28_RS26155 CDO28_RS26160 IPR005471 Transcription regulator IclR, N-terminal CDO28_RS26160 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS26160 IPR014757 Transcription regulator IclR, C-terminal CDO28_RS26160 IPR029016 GAF domain-like CDO28_RS26165 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS26170 IPR000515 MetI-like domain CDO28_RS26175 IPR000515 MetI-like domain CDO28_RS26180 IPR003439 ABC transporter-like CDO28_RS26180 IPR003593 AAA+ ATPase domain CDO28_RS26180 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS26180 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS26180 IPR013611 Transport-associated OB, type 2 CDO28_RS26180 IPR017871 ABC transporter, conserved site CDO28_RS26180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26185 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDO28_RS26185 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDO28_RS26185 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CDO28_RS26185 IPR029017 Enolase N-terminal domain-like CDO28_RS26185 IPR029065 Enolase C-terminal domain-like CDO28_RS26190 IPR008000 Rhamnose mutarotase CDO28_RS26190 IPR011008 Dimeric alpha-beta barrel CDO28_RS26195 IPR000683 Oxidoreductase, N-terminal CDO28_RS26195 IPR016040 NAD(P)-binding domain CDO28_RS26200 IPR002539 MaoC-like domain CDO28_RS26200 IPR029069 HotDog domain CDO28_RS26205 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS26205 IPR016040 NAD(P)-binding domain CDO28_RS26205 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS26210 IPR011234 Fumarylacetoacetase, C-terminal-related CDO28_RS26215 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDO28_RS26215 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDO28_RS26215 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CDO28_RS26215 IPR029017 Enolase N-terminal domain-like CDO28_RS26215 IPR029065 Enolase C-terminal domain-like CDO28_RS26225 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS26225 IPR005561 ANTAR domain CDO28_RS26225 IPR008327 Signal transduction response regulator, antiterminator CDO28_RS26225 IPR011006 CheY-like superfamily CDO28_RS26225 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS26230 IPR012924 TfuA-like, core CDO28_RS26235 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS26235 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS26245 IPR006001 Carbohydrate kinase, thermoresistant glucokinase CDO28_RS26245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26245 IPR031322 CDO28_RS26245 CDO28_RS26255 IPR006089 Acyl-CoA dehydrogenase, conserved site CDO28_RS26255 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDO28_RS26255 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDO28_RS26255 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CDO28_RS26255 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDO28_RS26260 IPR000022 Carboxyl transferase CDO28_RS26260 IPR029045 ClpP/crotonase-like domain CDO28_RS26265 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS26265 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS26270 IPR000089 Biotin/lipoyl attachment CDO28_RS26270 IPR001882 Biotin-binding site CDO28_RS26270 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDO28_RS26270 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CDO28_RS26270 IPR005482 Biotin carboxylase, C-terminal CDO28_RS26270 IPR011053 Single hybrid motif CDO28_RS26270 IPR011054 Rudiment single hybrid motif CDO28_RS26270 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS26270 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS26270 IPR016185 Pre-ATP-grasp domain CDO28_RS26275 IPR000891 Pyruvate carboxyltransferase CDO28_RS26275 IPR013785 Aldolase-type TIM barrel CDO28_RS26280 IPR001753 Crotonase superfamily CDO28_RS26280 IPR014748 Crontonase, C-terminal CDO28_RS26280 IPR029045 ClpP/crotonase-like domain CDO28_RS26285 IPR024467 Domain of unknown function DUF2384 CDO28_RS26290 IPR014914 RES CDO28_RS26295 IPR004113 FAD-linked oxidase, C-terminal CDO28_RS26295 IPR006094 FAD linked oxidase, N-terminal CDO28_RS26295 IPR016164 FAD-linked oxidase-like, C-terminal CDO28_RS26295 IPR016166 FAD-binding, type 2 CDO28_RS26295 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS26295 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS26295 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CDO28_RS26300 IPR003439 ABC transporter-like CDO28_RS26300 IPR003593 AAA+ ATPase domain CDO28_RS26300 IPR005666 Sulphate transport system permease protein 1 CDO28_RS26300 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS26300 IPR017871 ABC transporter, conserved site CDO28_RS26300 IPR024765 TOBE-like domain CDO28_RS26300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26305 IPR000515 MetI-like domain CDO28_RS26305 IPR005667 Sulphate ABC transporter permease protein 2 CDO28_RS26305 IPR011866 Sulphate ABC transporter, permease protein CysW CDO28_RS26310 IPR000515 MetI-like domain CDO28_RS26310 IPR005667 Sulphate ABC transporter permease protein 2 CDO28_RS26310 IPR011865 Sulphate ABC transporter, permease protein CysT CDO28_RS26315 IPR000957 Sulphate/thiosulphate-binding, conserved site CDO28_RS26315 IPR005669 Thiosulphate/Sulfate-binding protein CDO28_RS26320 IPR001608 Alanine racemase, N-terminal CDO28_RS26320 IPR026956 D-serine dehydratase-like domain CDO28_RS26320 IPR029066 PLP-binding barrel CDO28_RS26325 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS26325 IPR018313 Extracellular solute-binding protein, family 3, conserved site CDO28_RS26330 IPR000515 MetI-like domain CDO28_RS26330 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS26335 IPR000515 MetI-like domain CDO28_RS26335 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS26340 IPR003439 ABC transporter-like CDO28_RS26340 IPR003593 AAA+ ATPase domain CDO28_RS26340 IPR017871 ABC transporter, conserved site CDO28_RS26340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26340 IPR030679 CDO28_RS26340 CDO28_RS26345 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS26345 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS26350 IPR005471 Transcription regulator IclR, N-terminal CDO28_RS26350 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS26350 IPR014757 Transcription regulator IclR, C-terminal CDO28_RS26350 IPR029016 GAF domain-like CDO28_RS26355 IPR003439 ABC transporter-like CDO28_RS26355 IPR003593 AAA+ ATPase domain CDO28_RS26355 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS26355 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS26355 IPR013611 Transport-associated OB, type 2 CDO28_RS26355 IPR017871 ABC transporter, conserved site CDO28_RS26355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26360 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CDO28_RS26360 IPR011611 Carbohydrate kinase PfkB CDO28_RS26360 IPR029056 Ribokinase-like CDO28_RS26365 IPR001347 Sugar isomerase (SIS) CDO28_RS26370 IPR000515 MetI-like domain CDO28_RS26375 IPR000515 MetI-like domain CDO28_RS26385 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS26390 IPR000600 ROK CDO28_RS26390 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS26395 IPR002500 Phosphoadenosine phosphosulphate reductase CDO28_RS26395 IPR011784 Sulphate adenylyltransferase, small subunit CDO28_RS26395 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS26400 IPR000795 Elongation factor, GTP-binding domain CDO28_RS26400 IPR002891 Adenylylsulphate kinase CDO28_RS26400 IPR009000 Translation protein, beta-barrel domain CDO28_RS26400 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CDO28_RS26400 IPR011779 Sulphate adenylyltransferase, large subunit CDO28_RS26400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26400 IPR031157 CDO28_RS26400 CDO28_RS26405 IPR000760 Inositol monophosphatase CDO28_RS26405 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial CDO28_RS26405 IPR020550 Inositol monophosphatase, conserved site CDO28_RS26405 IPR020583 Inositol monophosphatase, metal-binding site CDO28_RS26410 IPR016195 Polymerase/histidinol phosphatase-like CDO28_RS26415 IPR003806 ATP-grasp fold, DUF201-type CDO28_RS26415 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS26415 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS26415 IPR016185 Pre-ATP-grasp domain CDO28_RS26420 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS26420 IPR016040 NAD(P)-binding domain CDO28_RS26430 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS26430 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS26430 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS26435 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS26440 IPR001296 Glycosyl transferase, family 1 CDO28_RS26440 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS26450 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CDO28_RS26450 IPR016040 NAD(P)-binding domain CDO28_RS26455 IPR002376 Formyl transferase, N-terminal CDO28_RS26455 IPR005793 Formyl transferase, C-terminal CDO28_RS26455 IPR011034 Formyl transferase, C-terminal-like CDO28_RS26460 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS26465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26470 IPR011050 Pectin lyase fold/virulence factor CDO28_RS26470 IPR012334 Pectin lyase fold CDO28_RS26475 IPR003856 Lipopolysaccharide biosynthesis CDO28_RS26475 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26480 IPR007016 O-antigen ligase-related CDO28_RS26485 IPR001296 Glycosyl transferase, family 1 CDO28_RS26490 IPR000863 Sulfotransferase domain CDO28_RS26490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26495 IPR002797 Polysaccharide biosynthesis protein CDO28_RS26500 IPR003715 Polysaccharide export protein CDO28_RS26500 IPR019554 Soluble ligand binding domain CDO28_RS26505 IPR003362 Bacterial sugar transferase CDO28_RS26510 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related CDO28_RS26510 IPR024078 Putative deacetylase LmbE-like domain CDO28_RS26515 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDO28_RS26515 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS26515 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS26515 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS26520 IPR000863 Sulfotransferase domain CDO28_RS26520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26525 IPR001296 Glycosyl transferase, family 1 CDO28_RS26525 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS26530 IPR006685 Mechanosensitive ion channel MscS CDO28_RS26530 IPR010920 Like-Sm (LSM) domain CDO28_RS26530 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CDO28_RS26530 IPR011066 Mechanosensitive ion channel MscS, C-terminal CDO28_RS26535 IPR001296 Glycosyl transferase, family 1 CDO28_RS26540 IPR002509 Polysaccharide deacetylase CDO28_RS26540 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS26545 IPR001279 Beta-lactamase-like CDO28_RS26550 IPR021445 Protein of unknown function DUF3095 CDO28_RS26555 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CDO28_RS26555 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS26555 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CDO28_RS26555 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CDO28_RS26555 IPR016040 NAD(P)-binding domain CDO28_RS26555 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CDO28_RS26555 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CDO28_RS26560 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS26560 IPR029787 Nucleotide cyclase CDO28_RS26565 IPR025975 Polysaccharide lyase CDO28_RS26570 IPR003439 ABC transporter-like CDO28_RS26570 IPR003593 AAA+ ATPase domain CDO28_RS26570 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS26570 IPR017871 ABC transporter, conserved site CDO28_RS26570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26575 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS26580 IPR000515 MetI-like domain CDO28_RS26585 IPR000515 MetI-like domain CDO28_RS26585 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDO28_RS26590 IPR007235 Glycosyl transferase, family 28, C-terminal CDO28_RS26590 IPR016683 Glycosyl transferase, family 28, RedA, predicted CDO28_RS26595 IPR001296 Glycosyl transferase, family 1 CDO28_RS26600 IPR007235 Glycosyl transferase, family 28, C-terminal CDO28_RS26610 IPR003439 ABC transporter-like CDO28_RS26610 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS26610 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26615 IPR000595 Cyclic nucleotide-binding domain CDO28_RS26615 IPR014710 RmlC-like jelly roll fold CDO28_RS26615 IPR018488 Cyclic nucleotide-binding, conserved site CDO28_RS26615 IPR018490 Cyclic nucleotide-binding-like CDO28_RS26620 IPR006342 Methyltransferase FkbM CDO28_RS26620 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS26625 IPR000843 Transcription regulator HTH, LacI CDO28_RS26625 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS26625 IPR028082 Periplasmic binding protein-like I CDO28_RS26635 IPR000515 MetI-like domain CDO28_RS26640 IPR000515 MetI-like domain CDO28_RS26645 IPR003439 ABC transporter-like CDO28_RS26645 IPR003593 AAA+ ATPase domain CDO28_RS26645 IPR017871 ABC transporter, conserved site CDO28_RS26645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26650 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CDO28_RS26655 IPR006679 Adenine deaminase CDO28_RS26655 IPR006680 Amidohydrolase 1 CDO28_RS26655 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS26655 IPR026912 Adenine deaminase C-terminal domain CDO28_RS26655 IPR032466 CDO28_RS26655 CDO28_RS26660 IPR002933 Peptidase M20 CDO28_RS26660 IPR011650 Peptidase M20, dimerisation domain CDO28_RS26660 IPR017439 Amidohydrolase CDO28_RS26665 IPR000836 Phosphoribosyltransferase domain CDO28_RS26665 IPR029057 Phosphoribosyltransferase-like CDO28_RS26670 IPR006043 Xanthine/uracil/vitamin C permease CDO28_RS26670 IPR026033 Purine permease PbuG-like CDO28_RS26675 IPR018841 Protein of unknown function DUF2442 CDO28_RS26680 IPR005164 Allantoicase CDO28_RS26680 IPR008979 Galactose-binding domain-like CDO28_RS26680 IPR015908 Allantoicase domain CDO28_RS26685 IPR002509 Polysaccharide deacetylase CDO28_RS26685 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS26685 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 CDO28_RS26685 IPR017625 Putative urate catabolism protein CDO28_RS26685 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase CDO28_RS26690 IPR000895 Transthyretin/hydroxyisourate hydrolase CDO28_RS26690 IPR014306 Hydroxyisourate hydrolase CDO28_RS26690 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily CDO28_RS26690 IPR023418 Transthyretin, thyroxine binding site CDO28_RS26690 IPR023419 Transthyretin, conserved site CDO28_RS26695 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS26695 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDO28_RS26695 IPR002888 [2Fe-2S]-binding CDO28_RS26695 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDO28_RS26695 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS26695 IPR012175 Xanthine dehydrogenase, small subunit, bacteria CDO28_RS26695 IPR012675 Beta-grasp domain CDO28_RS26695 IPR014307 Xanthine dehydrogenase, small subunit CDO28_RS26695 IPR016166 FAD-binding, type 2 CDO28_RS26695 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS26695 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS26700 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS26700 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS26700 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit CDO28_RS26705 IPR003777 XdhC- CoxI CDO28_RS26705 IPR014308 Xanthine dehydrogenase accessory protein XdhC CDO28_RS26705 IPR016040 NAD(P)-binding domain CDO28_RS26705 IPR027051 XdhC Rossmann domain CDO28_RS26710 IPR002577 Helix-turn-helix, HxlR type CDO28_RS26710 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS26715 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CDO28_RS26715 IPR011032 GroES (chaperonin 10)-like CDO28_RS26715 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS26715 IPR016040 NAD(P)-binding domain CDO28_RS26715 IPR020843 Polyketide synthase, enoylreductase CDO28_RS26720 IPR000847 Transcription regulator HTH, LysR CDO28_RS26720 IPR005119 LysR, substrate-binding CDO28_RS26720 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS26725 IPR009056 Cytochrome c-like domain CDO28_RS26725 IPR010389 Protein of unknown function DUF989 CDO28_RS26730 IPR006680 Amidohydrolase 1 CDO28_RS26730 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS26730 IPR014311 Guanine deaminase CDO28_RS26730 IPR032466 CDO28_RS26730 CDO28_RS26735 IPR002068 Alpha crystallin/Hsp20 domain CDO28_RS26735 IPR008978 HSP20-like chaperone CDO28_RS26740 IPR002068 Alpha crystallin/Hsp20 domain CDO28_RS26740 IPR008978 HSP20-like chaperone CDO28_RS26745 IPR010385 Protein of unknown function DUF982 CDO28_RS26750 IPR001264 Glycosyl transferase, family 51 CDO28_RS26750 IPR001460 Penicillin-binding protein, transpeptidase CDO28_RS26750 IPR009647 Penicillin-binding, C-terminal CDO28_RS26750 IPR011815 Penicillin-binding protein 1C CDO28_RS26750 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS26750 IPR023346 Lysozyme-like domain CDO28_RS26755 IPR000177 Apple domain CDO28_RS26755 IPR001599 Alpha-2-macroglobulin CDO28_RS26755 IPR002890 Alpha-2-macroglobulin, N-terminal CDO28_RS26755 IPR003609 Apple-like CDO28_RS26755 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CDO28_RS26755 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CDO28_RS26755 IPR011990 Tetratricopeptide-like helical domain CDO28_RS26755 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming CDO28_RS26755 IPR021868 Alpha-2-macroglobulin MG1 domain CDO28_RS26755 IPR026284 Alpha-2-macroglobulin domain protein, bacteria CDO28_RS26760 IPR001034 HTH DeoR N-terminal domain CDO28_RS26760 IPR014036 DeoR C-terminal sensor domain CDO28_RS26760 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CDO28_RS26765 IPR002915 DeoC/FbaB/ lacD aldolase CDO28_RS26765 IPR011343 Deoxyribose-phosphate aldolase CDO28_RS26765 IPR013785 Aldolase-type TIM barrel CDO28_RS26770 IPR011408 Aldehyde dehydrogenase CDO28_RS26770 IPR015590 Aldehyde dehydrogenase domain CDO28_RS26770 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS26770 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS26770 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS26770 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS26775 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CDO28_RS26775 IPR023750 RbsD-like domain CDO28_RS26780 IPR003718 OsmC/Ohr family CDO28_RS26780 IPR015946 K homology domain-like, alpha/beta CDO28_RS26790 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS26790 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CDO28_RS26790 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS26790 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS26795 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CDO28_RS26800 IPR000515 MetI-like domain CDO28_RS26805 IPR003439 ABC transporter-like CDO28_RS26805 IPR003593 AAA+ ATPase domain CDO28_RS26805 IPR017871 ABC transporter, conserved site CDO28_RS26805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26810 IPR000515 MetI-like domain CDO28_RS26815 IPR000683 Oxidoreductase, N-terminal CDO28_RS26815 IPR004104 Oxidoreductase, C-terminal CDO28_RS26815 IPR016040 NAD(P)-binding domain CDO28_RS26820 IPR000515 MetI-like domain CDO28_RS26825 IPR000515 MetI-like domain CDO28_RS26835 IPR003439 ABC transporter-like CDO28_RS26835 IPR003593 AAA+ ATPase domain CDO28_RS26835 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS26835 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS26835 IPR013611 Transport-associated OB, type 2 CDO28_RS26835 IPR017871 ABC transporter, conserved site CDO28_RS26835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26840 IPR000182 GNAT domain CDO28_RS26840 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS26845 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS26845 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS26850 IPR009197 Microcystin LR degradation protein MlrC CDO28_RS26850 IPR010799 Microcystin LR degradation protein MlrC, C-terminal CDO28_RS26850 IPR015995 Microcystin LR degradation protein MlrC, N-terminal CDO28_RS26855 IPR032710 CDO28_RS26855 CDO28_RS26860 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS26860 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS26865 IPR000281 Helix-turn-helix protein RpiR CDO28_RS26865 IPR001347 Sugar isomerase (SIS) CDO28_RS26865 IPR009057 Homeodomain-like CDO28_RS26865 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS26870 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS26870 IPR016040 NAD(P)-binding domain CDO28_RS26870 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS26875 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS26875 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal CDO28_RS26875 IPR015883 Glycoside hydrolase family 20, catalytic core CDO28_RS26875 IPR017853 Glycoside hydrolase, superfamily CDO28_RS26875 IPR025705 Beta-hexosaminidase CDO28_RS26875 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like CDO28_RS26880 IPR009197 Microcystin LR degradation protein MlrC CDO28_RS26880 IPR010799 Microcystin LR degradation protein MlrC, C-terminal CDO28_RS26880 IPR015995 Microcystin LR degradation protein MlrC, N-terminal CDO28_RS26885 IPR020846 Major facilitator superfamily domain CDO28_RS26890 IPR023636 Urocanase conserved site CDO28_RS26890 IPR023637 Urocanase CDO28_RS26895 IPR002508 Cell wall hydrolase/autolysin, catalytic CDO28_RS26895 IPR007709 N-formylglutamate amidohydrolase CDO28_RS26895 IPR010247 N-formylglutamate deformylase CDO28_RS26900 IPR001106 Aromatic amino acid lyase CDO28_RS26900 IPR005921 Histidine ammonia-lyase CDO28_RS26900 IPR008948 L-Aspartase-like CDO28_RS26900 IPR022313 Phenylalanine/histidine ammonia-lyases, active site CDO28_RS26900 IPR024083 Fumarase/histidase, N-terminal CDO28_RS26905 IPR005920 Imidazolonepropionase CDO28_RS26905 IPR006680 Amidohydrolase 1 CDO28_RS26905 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS26905 IPR032466 CDO28_RS26905 CDO28_RS26910 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA CDO28_RS26910 IPR000477 Reverse transcriptase domain CDO28_RS26910 IPR013597 Group II intron, maturase-specific CDO28_RS26910 IPR030931 CDO28_RS26910 CDO28_RS26915 IPR011701 Major facilitator superfamily CDO28_RS26915 IPR020846 Major facilitator superfamily domain CDO28_RS26920 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS26920 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS26925 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CDO28_RS26925 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN CDO28_RS26925 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26930 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS26930 IPR012696 Phosphonate metabolism PhnM CDO28_RS26930 IPR013108 Amidohydrolase 3 CDO28_RS26930 IPR032466 CDO28_RS26930 CDO28_RS26935 IPR009389 Protein of unknown function DUF1045 CDO28_RS26945 IPR000515 MetI-like domain CDO28_RS26945 IPR005769 ABC transporter, permease PhnE/PtxC CDO28_RS26950 IPR000515 MetI-like domain CDO28_RS26950 IPR005769 ABC transporter, permease PhnE/PtxC CDO28_RS26955 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic protein CDO28_RS26955 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein CDO28_RS26960 IPR003439 ABC transporter-like CDO28_RS26960 IPR003593 AAA+ ATPase domain CDO28_RS26960 IPR012693 ABC transporter, phosphonate import, PhnC CDO28_RS26960 IPR017871 ABC transporter, conserved site CDO28_RS26960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS26965 IPR010426 Trimethylamine methyltransferase CDO28_RS26970 IPR006076 FAD dependent oxidoreductase CDO28_RS26970 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS26975 IPR000847 Transcription regulator HTH, LysR CDO28_RS26975 IPR005119 LysR, substrate-binding CDO28_RS26975 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS26980 IPR006089 Acyl-CoA dehydrogenase, conserved site CDO28_RS26980 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDO28_RS26980 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDO28_RS26980 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CDO28_RS26980 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDO28_RS26985 IPR003673 CoA-transferase family III CDO28_RS26985 IPR023606 CoA-transferase family III domain CDO28_RS26990 IPR001404 Heat shock protein Hsp90 family CDO28_RS26990 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS26990 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS26990 IPR020575 Heat shock protein Hsp90, N-terminal CDO28_RS26995 IPR000890 Aliphatic acid kinase, short-chain CDO28_RS26995 IPR004372 Acetate/Proprionate kinase CDO28_RS26995 IPR023865 Aliphatic acid kinase, short-chain, conserved site CDO28_RS27000 IPR010102 Succinate semialdehyde dehydrogenase CDO28_RS27000 IPR015590 Aldehyde dehydrogenase domain CDO28_RS27000 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS27000 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS27000 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS27000 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS27005 IPR004632 4-aminobutyrate aminotransferase, bacterial CDO28_RS27005 IPR005814 Aminotransferase class-III CDO28_RS27005 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS27005 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS27005 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS27010 IPR000551 MerR-type HTH domain CDO28_RS27010 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS27010 IPR009061 DNA binding domain, putative CDO28_RS27010 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS27010 IPR011051 RmlC-like cupin domain CDO28_RS27010 IPR013096 Cupin 2, conserved barrel CDO28_RS27010 IPR014710 RmlC-like jelly roll fold CDO28_RS27015 IPR002656 Acyltransferase 3 CDO28_RS27020 IPR001173 Glycosyltransferase 2-like CDO28_RS27020 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS27025 IPR001173 Glycosyltransferase 2-like CDO28_RS27025 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS27030 IPR003439 ABC transporter-like CDO28_RS27030 IPR003593 AAA+ ATPase domain CDO28_RS27030 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS27030 IPR017871 ABC transporter, conserved site CDO28_RS27030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27035 IPR000771 Ketose-bisphosphate aldolase, class-II CDO28_RS27035 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype CDO28_RS27035 IPR013785 Aldolase-type TIM barrel CDO28_RS27040 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS27040 IPR030678 CDO28_RS27040 CDO28_RS27045 IPR000515 MetI-like domain CDO28_RS27050 IPR000515 MetI-like domain CDO28_RS27050 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDO28_RS27055 IPR003439 ABC transporter-like CDO28_RS27055 IPR003593 AAA+ ATPase domain CDO28_RS27055 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS27055 IPR017871 ABC transporter, conserved site CDO28_RS27055 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27060 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS27060 IPR002078 RNA polymerase sigma factor 54 interaction domain CDO28_RS27060 IPR002197 DNA binding HTH domain, Fis-type CDO28_RS27060 IPR003593 AAA+ ATPase domain CDO28_RS27060 IPR009057 Homeodomain-like CDO28_RS27060 IPR011006 CheY-like superfamily CDO28_RS27060 IPR025944 Sigma-54 interaction domain, conserved site CDO28_RS27060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27065 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS27065 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS27065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS27065 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CDO28_RS27065 IPR029151 Periplasmic sensor domain-like CDO28_RS27065 IPR033479 CDO28_RS27065 CDO28_RS27070 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS27070 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS27075 IPR002925 Dienelactone hydrolase CDO28_RS27075 IPR029058 Alpha/Beta hydrolase fold CDO28_RS27095 IPR003439 ABC transporter-like CDO28_RS27095 IPR003593 AAA+ ATPase domain CDO28_RS27095 IPR017871 ABC transporter, conserved site CDO28_RS27095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27100 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG CDO28_RS27100 IPR032317 CDO28_RS27100 CDO28_RS27105 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS27105 IPR009057 Homeodomain-like CDO28_RS27105 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS27105 IPR015292 Transcription regulator YbiH, C-terminal CDO28_RS27105 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS27110 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS27110 IPR003660 HAMP linker domain CDO28_RS27110 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS27115 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS27115 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS27115 IPR011006 CheY-like superfamily CDO28_RS27115 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS27115 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS27120 IPR000917 Sulfatase CDO28_RS27120 IPR012549 Domain of unknown function DUF1705 CDO28_RS27120 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CDO28_RS27120 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS27135 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS27135 IPR029052 Metallo-dependent phosphatase-like CDO28_RS27140 IPR000150 Cof protein CDO28_RS27140 IPR006439 HAD hydrolase, subfamily IA CDO28_RS27140 IPR023198 Phosphoglycolate phosphatase, domain 2 CDO28_RS27140 IPR023214 HAD-like domain CDO28_RS27145 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS27145 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDO28_RS27145 IPR030678 CDO28_RS27145 CDO28_RS27150 IPR029058 Alpha/Beta hydrolase fold CDO28_RS27155 IPR001296 Glycosyl transferase, family 1 CDO28_RS27155 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS27160 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS27170 IPR001296 Glycosyl transferase, family 1 CDO28_RS27170 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS27175 IPR013216 Methyltransferase type 11 CDO28_RS27175 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS27180 IPR001173 Glycosyltransferase 2-like CDO28_RS27180 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS27185 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS27185 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS27185 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS27190 IPR003997 RTX secretion protein D, Gram-negative bacteria CDO28_RS27190 IPR010129 Type I secretion membrane fusion protein, HlyD CDO28_RS27195 IPR003439 ABC transporter-like CDO28_RS27195 IPR003593 AAA+ ATPase domain CDO28_RS27195 IPR010128 ATPase, type I secretion system, PrtD CDO28_RS27195 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS27195 IPR017871 ABC transporter, conserved site CDO28_RS27195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27200 IPR000835 MarR-type HTH domain CDO28_RS27200 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS27200 IPR023187 Transcriptional regulator MarR-type, conserved site CDO28_RS27205 IPR001296 Glycosyl transferase, family 1 CDO28_RS27205 IPR022623 Domain of unknown function DUF3495 CDO28_RS27215 IPR001173 Glycosyltransferase 2-like CDO28_RS27215 IPR001296 Glycosyl transferase, family 1 CDO28_RS27215 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS27215 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS27220 IPR007345 Polysaccharide pyruvyl transferase CDO28_RS27225 IPR007345 Polysaccharide pyruvyl transferase CDO28_RS27230 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS27230 IPR017853 Glycoside hydrolase, superfamily CDO28_RS27235 IPR005835 Nucleotidyl transferase CDO28_RS27235 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CDO28_RS27235 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS27240 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related CDO28_RS27240 IPR011051 RmlC-like cupin domain CDO28_RS27240 IPR014710 RmlC-like jelly roll fold CDO28_RS27245 IPR005888 dTDP-glucose 4,6-dehydratase CDO28_RS27245 IPR016040 NAD(P)-binding domain CDO28_RS27250 IPR005913 dTDP-4-dehydrorhamnose reductase CDO28_RS27250 IPR016040 NAD(P)-binding domain CDO28_RS27250 IPR029903 CDO28_RS27250 CDO28_RS27255 IPR014583 Uncharacterised protein family, Sir2-like CDO28_RS27255 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS27265 IPR008462 CsbD-like CDO28_RS27265 IPR026042 Stress response protein YjbJ CDO28_RS27270 IPR021327 Protein of unknown function DUF2934 CDO28_RS27275 IPR007055 BON domain CDO28_RS27275 IPR014004 Transport-associated and nodulation domain, bacteria CDO28_RS27285 IPR009642 Protein of unknown function DUF1236 CDO28_RS27290 IPR002549 Uncharacterised protein family UPF0118 CDO28_RS27295 IPR009057 Homeodomain-like CDO28_RS27295 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS27295 IPR018062 HTH domain AraC-type, conserved site CDO28_RS27295 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS27300 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS27300 IPR002888 [2Fe-2S]-binding CDO28_RS27300 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS27300 IPR012675 Beta-grasp domain CDO28_RS27305 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDO28_RS27305 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDO28_RS27305 IPR016166 FAD-binding, type 2 CDO28_RS27305 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS27305 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS27310 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS27310 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS27315 IPR008775 Phytanoyl-CoA dioxygenase CDO28_RS27320 IPR001851 ABC transporter, permease CDO28_RS27325 IPR001851 ABC transporter, permease CDO28_RS27330 IPR003439 ABC transporter-like CDO28_RS27330 IPR003593 AAA+ ATPase domain CDO28_RS27330 IPR017871 ABC transporter, conserved site CDO28_RS27330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27335 IPR025997 Periplasmic binding protein domain CDO28_RS27335 IPR028082 Periplasmic binding protein-like I CDO28_RS27340 IPR000843 Transcription regulator HTH, LacI CDO28_RS27340 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS27340 IPR028082 Periplasmic binding protein-like I CDO28_RS27345 IPR011051 RmlC-like cupin domain CDO28_RS27345 IPR013096 Cupin 2, conserved barrel CDO28_RS27345 IPR014710 RmlC-like jelly roll fold CDO28_RS27345 IPR025499 Pectin degradation protein KdgF CDO28_RS27350 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS27350 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase CDO28_RS27350 IPR016040 NAD(P)-binding domain CDO28_RS27350 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS27355 IPR007045 5-keto 4-deoxyuronate isomerase CDO28_RS27355 IPR011051 RmlC-like cupin domain CDO28_RS27355 IPR021120 KduI/IolB isomerase CDO28_RS27355 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain CDO28_RS27355 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain CDO28_RS27360 IPR000524 Transcription regulator HTH, GntR CDO28_RS27360 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS27360 IPR011711 GntR, C-terminal CDO28_RS27360 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS27365 IPR004681 TRAP transporter permease protein CDO28_RS27365 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS27370 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS27375 IPR004682 TRAP dicarboxylate transporter CDO28_RS27375 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS27380 IPR003766 Uronate isomerase CDO28_RS27380 IPR023177 Uronate isomerase, domain 2 CDO28_RS27380 IPR032466 CDO28_RS27380 CDO28_RS27385 IPR000683 Oxidoreductase, N-terminal CDO28_RS27385 IPR004104 Oxidoreductase, C-terminal CDO28_RS27385 IPR016040 NAD(P)-binding domain CDO28_RS27390 IPR017039 Virulence factor BrkB CDO28_RS27395 IPR016923 Uncharacterised conserved protein UCP029509, membrane CDO28_RS27395 IPR019251 Domain of unknown function DUF2231, transmembrane CDO28_RS27420 IPR007353 Protein of unknown function DUF421 CDO28_RS27420 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CDO28_RS27430 IPR017039 Virulence factor BrkB CDO28_RS27435 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CDO28_RS27435 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS27435 IPR012938 Glucose/Sorbosone dehydrogenase CDO28_RS27440 IPR016923 Uncharacterised conserved protein UCP029509, membrane CDO28_RS27440 IPR019251 Domain of unknown function DUF2231, transmembrane CDO28_RS27450 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related CDO28_RS27455 IPR009056 Cytochrome c-like domain CDO28_RS27460 IPR001505 Copper centre Cu(A) CDO28_RS27460 IPR002429 Cytochrome c oxidase subunit II C-terminal CDO28_RS27460 IPR008972 Cupredoxin CDO28_RS27460 IPR009056 Cytochrome c-like domain CDO28_RS27465 IPR004837 Sodium/calcium exchanger membrane region CDO28_RS27470 IPR000298 Cytochrome c oxidase subunit III domain CDO28_RS27470 IPR000883 Cytochrome c oxidase subunit I CDO28_RS27470 IPR014241 Cytochrome c oxidase, subunit I bacterial type CDO28_RS27470 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDO28_RS27470 IPR023616 Cytochrome c oxidase, subunit I domain CDO28_RS27480 IPR000843 Transcription regulator HTH, LacI CDO28_RS27480 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS27480 IPR028082 Periplasmic binding protein-like I CDO28_RS27485 IPR012062 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit GatZ/KbaZ CDO28_RS27485 IPR013785 Aldolase-type TIM barrel CDO28_RS27490 IPR011611 Carbohydrate kinase PfkB CDO28_RS27490 IPR029056 Ribokinase-like CDO28_RS27495 IPR001851 ABC transporter, permease CDO28_RS27500 IPR003439 ABC transporter-like CDO28_RS27500 IPR003593 AAA+ ATPase domain CDO28_RS27500 IPR017871 ABC transporter, conserved site CDO28_RS27500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27505 IPR025997 Periplasmic binding protein domain CDO28_RS27505 IPR028082 Periplasmic binding protein-like I CDO28_RS27510 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS27510 IPR011057 Mss4-like CDO28_RS27515 IPR007361 Protein of unknown function DUF427 CDO28_RS27520 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal CDO28_RS27520 IPR015889 Intradiol ring-cleavage dioxygenase, core CDO28_RS27535 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS27535 IPR016040 NAD(P)-binding domain CDO28_RS27540 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS27540 IPR016040 NAD(P)-binding domain CDO28_RS27540 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS27545 IPR009057 Homeodomain-like CDO28_RS27545 IPR009594 Transcription regulator HTH, AraC, N-terminal CDO28_RS27545 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS27550 IPR000524 Transcription regulator HTH, GntR CDO28_RS27550 IPR004839 Aminotransferase, class I/classII CDO28_RS27550 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS27550 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS27550 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS27555 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS27555 IPR010068 Taurine ABC transporter, periplasmic binding protein TauA CDO28_RS27555 IPR015168 SsuA/THI5-like CDO28_RS27560 IPR003439 ABC transporter-like CDO28_RS27560 IPR003593 AAA+ ATPase domain CDO28_RS27560 IPR017871 ABC transporter, conserved site CDO28_RS27560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27565 IPR000515 MetI-like domain CDO28_RS27570 IPR009959 Polyketide cyclase SnoaL-like domain CDO28_RS27570 IPR032710 CDO28_RS27570 CDO28_RS27575 IPR006076 FAD dependent oxidoreductase CDO28_RS27575 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS27580 IPR000399 TPP-binding enzyme, conserved site CDO28_RS27580 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDO28_RS27580 IPR012000 Thiamine pyrophosphate enzyme, central domain CDO28_RS27580 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDO28_RS27580 IPR017820 Sulphoacetaldehyde acetyltransferase CDO28_RS27580 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS27580 IPR029061 Thiamin diphosphate-binding fold CDO28_RS27585 IPR018383 Uncharacterised protein family UPF0324, prokaryote CDO28_RS27590 IPR002505 Phosphate acetyl/butaryl transferase CDO28_RS27590 IPR004614 Phosphate acetyltransferase CDO28_RS27590 IPR012147 Phosphate acetyl/butyryltransferase CDO28_RS27595 IPR001034 HTH DeoR N-terminal domain CDO28_RS27595 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS27595 IPR014036 DeoR C-terminal sensor domain CDO28_RS27595 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CDO28_RS27600 IPR006076 FAD dependent oxidoreductase CDO28_RS27600 IPR006222 Glycine cleavage T-protein, N-terminal CDO28_RS27600 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CDO28_RS27600 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS27600 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CDO28_RS27600 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CDO28_RS27600 IPR032503 CDO28_RS27600 CDO28_RS27605 IPR000847 Transcription regulator HTH, LysR CDO28_RS27605 IPR005119 LysR, substrate-binding CDO28_RS27605 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS27605 IPR017724 Aminoethylphosphonate utilisation-associated transcription regulator, LysR-type CDO28_RS27610 IPR003841 Sodium-dependent phosphate transport protein CDO28_RS27610 IPR026022 PhoU domain CDO28_RS27615 IPR000192 Aminotransferase class V domain CDO28_RS27615 IPR012703 2-aminoethylphosphonate--pyruvate transaminase CDO28_RS27615 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS27615 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS27615 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS27615 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase CDO28_RS27620 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase CDO28_RS27620 IPR012710 Phosphonoacetate hydrolase CDO28_RS27620 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CDO28_RS27620 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS27625 IPR015590 Aldehyde dehydrogenase domain CDO28_RS27625 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS27625 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS27625 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS27625 IPR017656 Putative phosphonoacetaldehyde dehydrogenase CDO28_RS27625 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS27635 IPR017663 ABC transport system, 1-aminoethylphosphonate-binding protein, putative CDO28_RS27635 IPR026045 Ferric binding protein CDO28_RS27640 IPR003439 ABC transporter-like CDO28_RS27640 IPR003593 AAA+ ATPase domain CDO28_RS27640 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS27640 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 CDO28_RS27640 IPR017871 ABC transporter, conserved site CDO28_RS27640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27645 IPR000515 MetI-like domain CDO28_RS27645 IPR017664 2-aminoethylphosphonate ABC transport system, permease protein, putative CDO28_RS27650 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS27650 IPR007280 Peptidase, C-terminal, archaeal/bacterial CDO28_RS27650 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS27650 IPR013858 Peptidase M10 serralysin C-terminal domain CDO28_RS27650 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS27650 IPR024079 Metallopeptidase, catalytic domain CDO28_RS27660 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS27660 IPR007492 LytTR DNA-binding domain CDO28_RS27660 IPR011006 CheY-like superfamily CDO28_RS27665 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS27665 IPR010559 Signal transduction histidine kinase, internal region CDO28_RS27675 IPR005546 Autotransporter beta-domain CDO28_RS27680 IPR001763 Rhodanese-like domain CDO28_RS27685 IPR007272 Sulphur transport domain CDO28_RS27695 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS27710 IPR003148 Regulator of K+ conductance, N-terminal CDO28_RS27710 IPR004771 K+/H+ exchanger CDO28_RS27710 IPR006153 Cation/H+ exchanger CDO28_RS27710 IPR016040 NAD(P)-binding domain CDO28_RS27715 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS27715 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS27720 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDO28_RS27720 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDO28_RS27720 IPR016166 FAD-binding, type 2 CDO28_RS27720 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS27720 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS27725 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS27725 IPR002888 [2Fe-2S]-binding CDO28_RS27725 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS27725 IPR012675 Beta-grasp domain CDO28_RS27730 IPR009057 Homeodomain-like CDO28_RS27730 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS27730 IPR018062 HTH domain AraC-type, conserved site CDO28_RS27730 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS27735 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS27735 IPR003660 HAMP linker domain CDO28_RS27735 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS27735 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS27740 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS27740 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS27740 IPR011006 CheY-like superfamily CDO28_RS27740 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS27740 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS27745 IPR012899 LTXXQ motif family protein CDO28_RS27750 IPR012337 Ribonuclease H-like domain CDO28_RS27760 IPR010296 Protein of unknown function DUF899, thioredoxin-like CDO28_RS27760 IPR012336 Thioredoxin-like fold CDO28_RS27765 IPR001844 Chaperonin Cpn60 CDO28_RS27765 IPR002423 Chaperonin Cpn60/TCP-1 CDO28_RS27765 IPR018370 Chaperonin Cpn60, conserved site CDO28_RS27765 IPR027409 GroEL-like apical domain CDO28_RS27765 IPR027413 GroEL-like equatorial domain CDO28_RS27770 IPR011032 GroES (chaperonin 10)-like CDO28_RS27770 IPR018369 Chaperonin Cpn10, conserved site CDO28_RS27770 IPR020818 Chaperonin Cpn10 CDO28_RS27775 IPR009354 Usg-like CDO28_RS27780 IPR011051 RmlC-like cupin domain CDO28_RS27780 IPR014710 RmlC-like jelly roll fold CDO28_RS27780 IPR031723 CDO28_RS27780 CDO28_RS27785 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CDO28_RS27785 IPR013785 Aldolase-type TIM barrel CDO28_RS27785 IPR016040 NAD(P)-binding domain CDO28_RS27785 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS27790 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS27790 IPR009057 Homeodomain-like CDO28_RS27790 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS27795 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CDO28_RS27800 IPR002477 Peptidoglycan binding-like CDO28_RS27800 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS27805 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS27805 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS27810 IPR011701 Major facilitator superfamily CDO28_RS27810 IPR020846 Major facilitator superfamily domain CDO28_RS27815 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS27815 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS27830 IPR006121 Heavy metal-associated domain, HMA CDO28_RS27830 IPR017969 Heavy-metal-associated, conserved site CDO28_RS27835 IPR001757 Cation-transporting P-type ATPase CDO28_RS27835 IPR006121 Heavy metal-associated domain, HMA CDO28_RS27835 IPR006122 Heavy metal-associated domain, copper ion-binding CDO28_RS27835 IPR008250 P-type ATPase, A domain CDO28_RS27835 IPR017969 Heavy-metal-associated, conserved site CDO28_RS27835 IPR018303 P-type ATPase, phosphorylation site CDO28_RS27835 IPR023214 HAD-like domain CDO28_RS27835 IPR023299 P-type ATPase, cytoplasmic domain N CDO28_RS27835 IPR027256 Cation-transporting P-type ATPase, subfamily IB CDO28_RS27840 IPR000551 MerR-type HTH domain CDO28_RS27840 IPR009061 DNA binding domain, putative CDO28_RS27840 IPR011789 Cu(I)-responsive transcriptional regulator CDO28_RS27840 IPR015358 Transcription regulator MerR, DNA binding CDO28_RS27845 IPR020143 Uncharacterised protein family, RP436 CDO28_RS27845 IPR032816 CDO28_RS27845 CDO28_RS27850 IPR001296 Glycosyl transferase, family 1 CDO28_RS27850 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS27855 IPR010331 Exopolysaccharide synthesis, ExoD CDO28_RS27865 IPR002508 Cell wall hydrolase/autolysin, catalytic CDO28_RS27865 IPR007709 N-formylglutamate amidohydrolase CDO28_RS27870 IPR012548 Protein of unknown function DUF1704 CDO28_RS27870 IPR012656 Conserved hypothetical protein CHP02421, QEGLA CDO28_RS27875 IPR004215 Prokaryotic glutathione synthetase, N-terminal CDO28_RS27875 IPR004218 Prokaryotic glutathione synthetase, ATP-binding CDO28_RS27875 IPR006284 Glutathione synthetase, prokaryotic CDO28_RS27875 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS27875 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS27875 IPR016185 Pre-ATP-grasp domain CDO28_RS27875 IPR018506 Cytochrome b5, heme-binding site CDO28_RS27880 IPR025997 Periplasmic binding protein domain CDO28_RS27880 IPR028082 Periplasmic binding protein-like I CDO28_RS27885 IPR003439 ABC transporter-like CDO28_RS27885 IPR003593 AAA+ ATPase domain CDO28_RS27885 IPR017871 ABC transporter, conserved site CDO28_RS27885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27890 IPR001851 ABC transporter, permease CDO28_RS27895 IPR001851 ABC transporter, permease CDO28_RS27900 IPR000524 Transcription regulator HTH, GntR CDO28_RS27900 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS27900 IPR011711 GntR, C-terminal CDO28_RS27900 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS27905 IPR003439 ABC transporter-like CDO28_RS27905 IPR003593 AAA+ ATPase domain CDO28_RS27905 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS27905 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS27905 IPR013611 Transport-associated OB, type 2 CDO28_RS27905 IPR017871 ABC transporter, conserved site CDO28_RS27905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27910 IPR000515 MetI-like domain CDO28_RS27915 IPR000515 MetI-like domain CDO28_RS27920 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS27925 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS27930 IPR000683 Oxidoreductase, N-terminal CDO28_RS27930 IPR016040 NAD(P)-binding domain CDO28_RS27935 IPR000843 Transcription regulator HTH, LacI CDO28_RS27935 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS27935 IPR028082 Periplasmic binding protein-like I CDO28_RS27945 IPR001466 Beta-lactamase-related CDO28_RS27945 IPR001586 Beta-lactamase, class-C active site CDO28_RS27945 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS27950 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS27950 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS27950 IPR016943 Uncharacterised conserved protein UCP030050, HTH transcriptional regulator, BH1869 CDO28_RS27955 IPR000515 MetI-like domain CDO28_RS27960 IPR000515 MetI-like domain CDO28_RS27970 IPR003439 ABC transporter-like CDO28_RS27970 IPR003593 AAA+ ATPase domain CDO28_RS27970 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS27970 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS27970 IPR013611 Transport-associated OB, type 2 CDO28_RS27970 IPR017871 ABC transporter, conserved site CDO28_RS27970 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS27975 IPR010720 Alpha-L-arabinofuranosidase, C-terminal CDO28_RS27975 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS27975 IPR017853 Glycoside hydrolase, superfamily CDO28_RS27985 IPR000644 CBS domain CDO28_RS27985 IPR008915 Peptidase M50 CDO28_RS27985 IPR016483 Uncharacterised conserved protein UCP006404, peptidase M50/CBS CDO28_RS27990 IPR013901 Protein of unknown function DUF1772 CDO28_RS28000 IPR001478 PDZ domain CDO28_RS28000 IPR005151 Tail specific protease CDO28_RS28000 IPR029045 ClpP/crotonase-like domain CDO28_RS28005 IPR001851 ABC transporter, permease CDO28_RS28010 IPR003439 ABC transporter-like CDO28_RS28010 IPR003593 AAA+ ATPase domain CDO28_RS28010 IPR017871 ABC transporter, conserved site CDO28_RS28010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS28015 IPR025997 Periplasmic binding protein domain CDO28_RS28015 IPR028082 Periplasmic binding protein-like I CDO28_RS28020 IPR000757 Glycoside hydrolase, family 16 CDO28_RS28020 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS28020 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CDO28_RS28025 IPR000014 PAS domain CDO28_RS28025 IPR001610 PAC motif CDO28_RS28025 IPR003018 GAF domain CDO28_RS28025 IPR011102 Signal transduction histidine kinase, HWE region CDO28_RS28025 IPR013655 PAS fold-3 CDO28_RS28025 IPR013656 PAS fold-4 CDO28_RS28025 IPR013767 PAS fold CDO28_RS28025 IPR029016 GAF domain-like CDO28_RS28030 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS28030 IPR011006 CheY-like superfamily CDO28_RS28035 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS28035 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS28050 IPR003439 ABC transporter-like CDO28_RS28050 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS28050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS28055 IPR007197 Radical SAM CDO28_RS28055 IPR013785 Aldolase-type TIM barrel CDO28_RS28055 IPR017742 7-carboxy-7-deazaguanine synthase CDO28_RS28055 IPR024924 7-carboxy-7-deazaguanine synthase-like CDO28_RS28060 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CDO28_RS28065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS28065 IPR018317 Queuosine biosynthesis protein QueC CDO28_RS28070 IPR003439 ABC transporter-like CDO28_RS28070 IPR003593 AAA+ ATPase domain CDO28_RS28070 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS28070 IPR017871 ABC transporter, conserved site CDO28_RS28070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS28075 IPR005886 UDP-glucose 4-epimerase GalE CDO28_RS28075 IPR016040 NAD(P)-binding domain CDO28_RS28080 IPR002656 Acyltransferase 3 CDO28_RS28090 IPR003715 Polysaccharide export protein CDO28_RS28095 IPR003362 Bacterial sugar transferase CDO28_RS28100 IPR024239 Exopolysaccharide production repressor CDO28_RS28105 IPR001173 Glycosyltransferase 2-like CDO28_RS28105 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS28110 IPR007345 Polysaccharide pyruvyl transferase CDO28_RS28115 IPR001173 Glycosyltransferase 2-like CDO28_RS28115 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS28130 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CDO28_RS28145 IPR002656 Acyltransferase 3 CDO28_RS28150 IPR000757 Glycoside hydrolase, family 16 CDO28_RS28150 IPR008263 Glycoside hydrolase, family 16, active site CDO28_RS28150 IPR008264 Beta-glucanase CDO28_RS28150 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CDO28_RS28160 IPR001173 Glycosyltransferase 2-like CDO28_RS28160 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS28165 IPR001173 Glycosyltransferase 2-like CDO28_RS28165 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS28170 IPR001173 Glycosyltransferase 2-like CDO28_RS28170 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS28175 IPR005835 Nucleotidyl transferase CDO28_RS28175 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS28180 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDO28_RS28180 IPR003856 Lipopolysaccharide biosynthesis CDO28_RS28180 IPR005700 Exopolysaccharide transport protein CDO28_RS28180 IPR005702 Exopolysaccharide synthesis protein CDO28_RS28180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS28180 IPR032807 CDO28_RS28180 CDO28_RS28190 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CDO28_RS28190 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CDO28_RS28190 IPR029056 Ribokinase-like CDO28_RS28195 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDO28_RS28195 IPR012336 Thioredoxin-like fold CDO28_RS28195 IPR019479 Peroxiredoxin, C-terminal CDO28_RS28195 IPR024706 Peroxiredoxin, AhpC-type CDO28_RS28200 IPR001466 Beta-lactamase-related CDO28_RS28200 IPR012338 Beta-lactamase/transpeptidase-like CDO28_RS28205 IPR003476 Glycoside hydrolase, family 42 CDO28_RS28205 IPR013529 Glycoside hydrolase, family 42, N-terminal CDO28_RS28205 IPR013738 Beta-galactosidase trimerisation CDO28_RS28205 IPR013739 Beta-galactosidase C-terminal CDO28_RS28205 IPR013780 Glycosyl hydrolase, family 13, all-beta CDO28_RS28205 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS28205 IPR017853 Glycoside hydrolase, superfamily CDO28_RS28205 IPR029062 Class I glutamine amidotransferase-like CDO28_RS28210 IPR000843 Transcription regulator HTH, LacI CDO28_RS28210 IPR001761 Periplasmic binding protein/LacI sugar binding domain CDO28_RS28210 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS28210 IPR028082 Periplasmic binding protein-like I CDO28_RS28215 IPR008928 Six-hairpin glycosidase-like CDO28_RS28215 IPR012341 Six-hairpin glycosidase CDO28_RS28220 IPR000515 MetI-like domain CDO28_RS28225 IPR000515 MetI-like domain CDO28_RS28230 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS28235 IPR003439 ABC transporter-like CDO28_RS28235 IPR003593 AAA+ ATPase domain CDO28_RS28235 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS28235 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS28235 IPR013611 Transport-associated OB, type 2 CDO28_RS28235 IPR017871 ABC transporter, conserved site CDO28_RS28235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS28240 IPR002575 Aminoglycoside phosphotransferase CDO28_RS28240 IPR005814 Aminotransferase class-III CDO28_RS28240 IPR011009 Protein kinase-like domain CDO28_RS28240 IPR011055 Duplicated hybrid motif CDO28_RS28240 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS28240 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS28240 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS28240 IPR016047 Peptidase M23 CDO28_RS28245 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS28245 IPR016040 NAD(P)-binding domain CDO28_RS28250 IPR000515 MetI-like domain CDO28_RS28255 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS28255 IPR018313 Extracellular solute-binding protein, family 3, conserved site CDO28_RS28260 IPR000843 Transcription regulator HTH, LacI CDO28_RS28260 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS28260 IPR028082 Periplasmic binding protein-like I CDO28_RS28265 IPR002539 MaoC-like domain CDO28_RS28265 IPR029069 HotDog domain CDO28_RS28270 IPR004681 TRAP transporter permease protein CDO28_RS28270 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS28275 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS28280 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS28295 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CDO28_RS28295 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site CDO28_RS28295 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CDO28_RS28295 IPR007419 BFD-like [2Fe-2S]-binding domain CDO28_RS28295 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CDO28_RS28295 IPR017121 Nitrite reductase [NAD(P)H], large subunit CDO28_RS28295 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS28300 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD CDO28_RS28300 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS28305 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CDO28_RS28305 IPR006656 Molybdopterin oxidoreductase CDO28_RS28305 IPR006657 Molydopterin dinucleotide-binding domain CDO28_RS28305 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CDO28_RS28305 IPR007419 BFD-like [2Fe-2S]-binding domain CDO28_RS28305 IPR009010 Aspartate decarboxylase-like domain CDO28_RS28305 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CDO28_RS28310 IPR000878 Tetrapyrrole methylase CDO28_RS28310 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CDO28_RS28310 IPR006367 Sirohaem synthase, N-terminal CDO28_RS28310 IPR014777 Tetrapyrrole methylase, subdomain 1 CDO28_RS28310 IPR016040 NAD(P)-binding domain CDO28_RS28310 IPR019478 Sirohaem synthase, dimerisation domain CDO28_RS28310 IPR028281 Siroheme synthase, central domain CDO28_RS28315 IPR000086 NUDIX hydrolase domain CDO28_RS28315 IPR015797 NUDIX hydrolase domain-like CDO28_RS28315 IPR020084 NUDIX hydrolase, conserved site CDO28_RS28315 IPR020476 NUDIX hydrolase CDO28_RS28325 IPR001107 Band 7 protein CDO28_RS28325 IPR001972 Stomatin family CDO28_RS28330 IPR002810 NfeD-like, C-terminal domain CDO28_RS28330 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS28330 IPR029045 ClpP/crotonase-like domain CDO28_RS28335 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS28340 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS28350 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDO28_RS28350 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDO28_RS28350 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CDO28_RS28350 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CDO28_RS28350 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDO28_RS28350 IPR023922 Sulphate-starvation-induced SfnB CDO28_RS28355 IPR000944 Transcription regulator Rrf2-like CDO28_RS28355 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS28360 IPR005225 Small GTP-binding protein domain CDO28_RS28360 IPR006073 GTP binding domain CDO28_RS28360 IPR015946 K homology domain-like, alpha/beta CDO28_RS28360 IPR016484 GTP-binding protein EngA CDO28_RS28360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS28360 IPR032859 CDO28_RS28360 CDO28_RS28365 IPR011990 Tetratricopeptide-like helical domain CDO28_RS28365 IPR018704 Domain of unknown function DUF09976 CDO28_RS28370 IPR009915 NnrU CDO28_RS28375 IPR002509 Polysaccharide deacetylase CDO28_RS28375 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS28380 IPR009248 SbmA/BacA-like CDO28_RS28380 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS28385 IPR010645 Domain of unknown function DUF1228 CDO28_RS28385 IPR020846 Major facilitator superfamily domain CDO28_RS28395 IPR002559 Transposase, IS4-like CDO28_RS28395 IPR032806 CDO28_RS28395 CDO28_RS28400 IPR000994 Peptidase M24, structural domain CDO28_RS28400 IPR001714 Peptidase M24, methionine aminopeptidase CDO28_RS28400 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CDO28_RS28405 IPR011251 Luciferase-like domain CDO28_RS28405 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative CDO28_RS28410 IPR014922 Domain of unknown function DUF1801 CDO28_RS28415 IPR014922 Domain of unknown function DUF1801 CDO28_RS28425 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDO28_RS28425 IPR023393 START-like domain CDO28_RS28430 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS28430 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS28435 IPR000577 CDO28_RS28435 CDO28_RS28435 IPR005999 Glycerol kinase CDO28_RS28435 IPR018483 Carbohydrate kinase, FGGY, conserved site CDO28_RS28435 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS28435 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDO28_RS28440 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS28440 IPR011294 3-hydroxybutyrate dehydrogenase CDO28_RS28440 IPR016040 NAD(P)-binding domain CDO28_RS28440 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS28445 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS28445 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDO28_RS28445 IPR002888 [2Fe-2S]-binding CDO28_RS28445 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDO28_RS28445 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS28445 IPR012175 Xanthine dehydrogenase, small subunit, bacteria CDO28_RS28445 IPR012675 Beta-grasp domain CDO28_RS28445 IPR014307 Xanthine dehydrogenase, small subunit CDO28_RS28445 IPR016166 FAD-binding, type 2 CDO28_RS28445 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS28445 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS28455 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS28455 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS28455 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit CDO28_RS28470 IPR000847 Transcription regulator HTH, LysR CDO28_RS28470 IPR005119 LysR, substrate-binding CDO28_RS28470 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS28475 IPR009056 Cytochrome c-like domain CDO28_RS28475 IPR010389 Protein of unknown function DUF989 CDO28_RS28480 IPR006680 Amidohydrolase 1 CDO28_RS28480 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS28480 IPR014311 Guanine deaminase CDO28_RS28480 IPR032466 CDO28_RS28480 CDO28_RS28485 IPR000262 FMN-dependent dehydrogenase CDO28_RS28485 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CDO28_RS28485 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent CDO28_RS28485 IPR013785 Aldolase-type TIM barrel CDO28_RS28490 IPR007324 Sugar-binding domain, putative CDO28_RS28490 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS28495 IPR000577 CDO28_RS28495 CDO28_RS28495 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS28495 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDO28_RS28500 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS28500 IPR011032 GroES (chaperonin 10)-like CDO28_RS28500 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS28500 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS28500 IPR016040 NAD(P)-binding domain CDO28_RS28500 IPR020843 Polyketide synthase, enoylreductase CDO28_RS28505 IPR001851 ABC transporter, permease CDO28_RS28510 IPR003439 ABC transporter-like CDO28_RS28510 IPR003593 AAA+ ATPase domain CDO28_RS28510 IPR017871 ABC transporter, conserved site CDO28_RS28510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS28515 IPR025997 Periplasmic binding protein domain CDO28_RS28515 IPR028082 Periplasmic binding protein-like I CDO28_RS28520 IPR010551 Glucose-6-phosphate isomerase, prokaryote CDO28_RS28520 IPR011051 RmlC-like cupin domain CDO28_RS28520 IPR014710 RmlC-like jelly roll fold CDO28_RS28520 IPR016758 Glucose-6-phosphate isomerase, subgroup CDO28_RS28525 IPR000262 FMN-dependent dehydrogenase CDO28_RS28525 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site CDO28_RS28525 IPR013785 Aldolase-type TIM barrel CDO28_RS28530 IPR009057 Homeodomain-like CDO28_RS28530 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS28530 IPR018062 HTH domain AraC-type, conserved site CDO28_RS28530 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS28540 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS28540 IPR029058 Alpha/Beta hydrolase fold CDO28_RS28545 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CDO28_RS28545 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS28555 IPR006685 Mechanosensitive ion channel MscS CDO28_RS28555 IPR010920 Like-Sm (LSM) domain CDO28_RS28555 IPR011066 Mechanosensitive ion channel MscS, C-terminal CDO28_RS28555 IPR016846 Predicted ion channel, cNMP-binding CDO28_RS28560 IPR011051 RmlC-like cupin domain CDO28_RS28560 IPR013096 Cupin 2, conserved barrel CDO28_RS28560 IPR014710 RmlC-like jelly roll fold CDO28_RS28565 IPR016040 NAD(P)-binding domain CDO28_RS28570 IPR001279 Beta-lactamase-like CDO28_RS28580 IPR000014 PAS domain CDO28_RS28580 IPR001610 PAC motif CDO28_RS28580 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS28580 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS28580 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS28580 IPR007895 MASE1 CDO28_RS28580 IPR013655 PAS fold-3 CDO28_RS28585 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS28585 IPR011006 CheY-like superfamily CDO28_RS28590 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS28590 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS28590 IPR011006 CheY-like superfamily CDO28_RS28590 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS28590 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS28595 IPR000847 Transcription regulator HTH, LysR CDO28_RS28595 IPR005119 LysR, substrate-binding CDO28_RS28595 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS28600 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS28600 IPR016040 NAD(P)-binding domain CDO28_RS28600 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS28605 IPR000895 Transthyretin/hydroxyisourate hydrolase CDO28_RS28605 IPR014306 Hydroxyisourate hydrolase CDO28_RS28605 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily CDO28_RS28605 IPR023418 Transthyretin, thyroxine binding site CDO28_RS28605 IPR023419 Transthyretin, conserved site CDO28_RS28615 IPR007247 Ureidoglycolate hydrolase CDO28_RS28615 IPR011051 RmlC-like cupin domain CDO28_RS28615 IPR023525 Ureidoglycolate hydrolase, bacterial CDO28_RS28615 IPR024060 Ureidoglycolate hydrolase domain CDO28_RS28620 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 CDO28_RS28620 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase CDO28_RS28625 IPR002509 Polysaccharide deacetylase CDO28_RS28625 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS28625 IPR017625 Putative urate catabolism protein CDO28_RS28630 IPR009389 Protein of unknown function DUF1045 CDO28_RS28635 IPR006076 FAD dependent oxidoreductase CDO28_RS28635 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS28640 IPR008471 MnmC-like methyltransferase CDO28_RS28640 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS28645 IPR019291 Host attachment protein CDO28_RS28650 IPR001650 Helicase, C-terminal CDO28_RS28650 IPR011545 DEAD/DEAH box helicase domain CDO28_RS28650 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CDO28_RS28650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS28655 IPR007332 Protein of unknown function DUF411 CDO28_RS28655 IPR012336 Thioredoxin-like fold CDO28_RS28665 IPR032693 CDO28_RS28665 CDO28_RS28675 IPR000620 Drug/metabolite transporter CDO28_RS28680 IPR016450 Uncharacterised conserved protein UCP005522 CDO28_RS28680 IPR025841 Circularly permuted ATP-grasp type 2 CDO28_RS28685 IPR007296 Domain of unknown function DUF403 CDO28_RS28690 IPR002931 Transglutaminase-like CDO28_RS28690 IPR013589 Bacterial transglutaminase-like, N-terminal CDO28_RS28700 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CDO28_RS28700 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDO28_RS28705 IPR015590 Aldehyde dehydrogenase domain CDO28_RS28705 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS28705 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS28705 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS28705 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS28705 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CDO28_RS28710 IPR009645 Uncharacterised conserved protein GguC CDO28_RS28710 IPR011234 Fumarylacetoacetase, C-terminal-related CDO28_RS28715 IPR001851 ABC transporter, permease CDO28_RS28720 IPR003439 ABC transporter-like CDO28_RS28720 IPR003593 AAA+ ATPase domain CDO28_RS28720 IPR017871 ABC transporter, conserved site CDO28_RS28720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS28725 IPR025997 Periplasmic binding protein domain CDO28_RS28725 IPR028082 Periplasmic binding protein-like I CDO28_RS28730 IPR000847 Transcription regulator HTH, LysR CDO28_RS28730 IPR005119 LysR, substrate-binding CDO28_RS28730 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS28750 IPR000683 Oxidoreductase, N-terminal CDO28_RS28750 IPR004104 Oxidoreductase, C-terminal CDO28_RS28750 IPR016040 NAD(P)-binding domain CDO28_RS28750 IPR030827 CDO28_RS28750 CDO28_RS28755 IPR000014 PAS domain CDO28_RS28755 IPR000160 GGDEF domain CDO28_RS28755 IPR001633 EAL domain CDO28_RS28755 IPR005330 MHYT CDO28_RS28755 IPR029787 Nucleotide cyclase CDO28_RS28760 IPR000600 ROK CDO28_RS28760 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS28765 IPR013456 D-xylose ABC transporter, substrate-binding protein CDO28_RS28765 IPR025997 Periplasmic binding protein domain CDO28_RS28765 IPR028082 Periplasmic binding protein-like I CDO28_RS28770 IPR001851 ABC transporter, permease CDO28_RS28775 IPR003439 ABC transporter-like CDO28_RS28775 IPR003593 AAA+ ATPase domain CDO28_RS28775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS28790 IPR003346 Transposase, IS116/IS110/IS902 CDO28_RS28820 IPR022037 Protein of unknown function DUF3606 CDO28_RS28835 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS28835 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS28835 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS28855 IPR001207 Transposase, mutator type CDO28_RS28870 IPR000868 Isochorismatase-like CDO28_RS28875 IPR006164 Ku70/Ku80 beta-barrel domain CDO28_RS28875 IPR009187 Predicted Ku, prokaryotic type CDO28_RS28875 IPR016194 SPOC like C-terminal domain CDO28_RS28880 IPR006164 Ku70/Ku80 beta-barrel domain CDO28_RS28880 IPR009187 Predicted Ku, prokaryotic type CDO28_RS28880 IPR016194 SPOC like C-terminal domain CDO28_RS28885 IPR000847 Transcription regulator HTH, LysR CDO28_RS28885 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS28895 IPR013216 Methyltransferase type 11 CDO28_RS28895 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS28905 IPR007438 Protein of unknown function DUF488 CDO28_RS28910 IPR002048 EF-hand domain CDO28_RS28910 IPR011992 EF-hand domain pair CDO28_RS28910 IPR018247 EF-Hand 1, calcium-binding site CDO28_RS28915 IPR002129 Pyridoxal phosphate-dependent decarboxylase CDO28_RS28915 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS28915 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS28915 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS28920 IPR006093 Oxygen oxidoreductase covalent FAD-binding site CDO28_RS28920 IPR006094 FAD linked oxidase, N-terminal CDO28_RS28920 IPR012951 Berberine/berberine-like CDO28_RS28920 IPR016164 FAD-linked oxidase-like, C-terminal CDO28_RS28920 IPR016166 FAD-binding, type 2 CDO28_RS28920 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS28920 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS28925 IPR005835 Nucleotidyl transferase CDO28_RS28925 IPR013446 Glucose-1-phosphate cytidylyltransferase CDO28_RS28925 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS28930 IPR013445 CDP-glucose 4,6-dehydratase CDO28_RS28930 IPR016040 NAD(P)-binding domain CDO28_RS28935 IPR013630 Methyltransferase putative zinc binding domain CDO28_RS28935 IPR013691 C-methyltransferase CDO28_RS28935 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS28940 IPR003313 AraC-type arabinose-binding/dimerisation domain CDO28_RS28940 IPR009057 Homeodomain-like CDO28_RS28940 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS28940 IPR018062 HTH domain AraC-type, conserved site CDO28_RS28950 IPR003762 L-arabinose isomerase CDO28_RS28950 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CDO28_RS28950 IPR009015 L-fucose isomerase, N-terminal/central domain CDO28_RS28950 IPR015888 L-fucose isomerase, C-terminal CDO28_RS28955 IPR025997 Periplasmic binding protein domain CDO28_RS28955 IPR028082 Periplasmic binding protein-like I CDO28_RS28960 IPR003439 ABC transporter-like CDO28_RS28960 IPR003593 AAA+ ATPase domain CDO28_RS28960 IPR017871 ABC transporter, conserved site CDO28_RS28960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS28965 IPR001851 ABC transporter, permease CDO28_RS28970 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain CDO28_RS28970 IPR005674 CocE/Serine esterase CDO28_RS28970 IPR008979 Galactose-binding domain-like CDO28_RS28970 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal CDO28_RS28970 IPR029058 Alpha/Beta hydrolase fold CDO28_RS28975 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase CDO28_RS28975 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS28980 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS28980 IPR016040 NAD(P)-binding domain CDO28_RS28985 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS28985 IPR011004 Trimeric LpxA-like CDO28_RS28990 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related CDO28_RS28990 IPR011051 RmlC-like cupin domain CDO28_RS28990 IPR014710 RmlC-like jelly roll fold CDO28_RS28995 IPR003439 ABC transporter-like CDO28_RS28995 IPR003593 AAA+ ATPase domain CDO28_RS28995 IPR017871 ABC transporter, conserved site CDO28_RS28995 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS29000 IPR000522 ABC transporter, permease protein CDO28_RS29000 IPR029022 ABC transporter, BtuC-like CDO28_RS29005 IPR002491 ABC transporter periplasmic binding domain CDO28_RS29010 IPR013216 Methyltransferase type 11 CDO28_RS29010 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS29020 IPR000847 Transcription regulator HTH, LysR CDO28_RS29020 IPR005119 LysR, substrate-binding CDO28_RS29020 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29025 IPR002933 Peptidase M20 CDO28_RS29025 IPR010158 Amidase, hydantoinase/carbamoylase CDO28_RS29025 IPR011650 Peptidase M20, dimerisation domain CDO28_RS29030 IPR004681 TRAP transporter permease protein CDO28_RS29030 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS29035 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS29040 IPR004682 TRAP dicarboxylate transporter CDO28_RS29040 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS29045 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS29045 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS29050 IPR025433 Domain of unknown function DUF4168 CDO28_RS29060 IPR000644 CBS domain CDO28_RS29065 IPR021327 Protein of unknown function DUF2934 CDO28_RS29075 IPR007055 BON domain CDO28_RS29075 IPR014004 Transport-associated and nodulation domain, bacteria CDO28_RS29085 IPR001631 DNA topoisomerase I CDO28_RS29085 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS29085 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type CDO28_RS29085 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type CDO28_RS29085 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 CDO28_RS29090 IPR004193 Glycoside hydrolase, family 13, N-terminal CDO28_RS29090 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CDO28_RS29090 IPR011837 Glycogen debranching enzyme, GlgX type CDO28_RS29090 IPR013780 Glycosyl hydrolase, family 13, all-beta CDO28_RS29090 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS29090 IPR013783 Immunoglobulin-like fold CDO28_RS29090 IPR014756 Immunoglobulin E-set CDO28_RS29090 IPR017853 Glycoside hydrolase, superfamily CDO28_RS29095 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CDO28_RS29095 IPR012768 Malto-oligosyltrehalose trehalohydrolase CDO28_RS29095 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS29095 IPR013783 Immunoglobulin-like fold CDO28_RS29095 IPR014756 Immunoglobulin E-set CDO28_RS29095 IPR017853 Glycoside hydrolase, superfamily CDO28_RS29100 IPR005122 Uracil-DNA glycosylase-like CDO28_RS29100 IPR005273 Uracil-DNA glycosylase, family 4 domain CDO28_RS29105 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS29105 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS29105 IPR012336 Thioredoxin-like fold CDO28_RS29110 IPR011051 RmlC-like cupin domain CDO28_RS29110 IPR013096 Cupin 2, conserved barrel CDO28_RS29110 IPR014500 Uncharacterised conserved protein UCP019307, cupin-type CDO28_RS29110 IPR014710 RmlC-like jelly roll fold CDO28_RS29140 IPR008482 Protein of unknown function DUF763 CDO28_RS29150 IPR000515 MetI-like domain CDO28_RS29155 IPR000515 MetI-like domain CDO28_RS29160 IPR003439 ABC transporter-like CDO28_RS29160 IPR003593 AAA+ ATPase domain CDO28_RS29160 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS29160 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS29160 IPR013611 Transport-associated OB, type 2 CDO28_RS29160 IPR017871 ABC transporter, conserved site CDO28_RS29160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS29170 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CDO28_RS29170 IPR011611 Carbohydrate kinase PfkB CDO28_RS29170 IPR029056 Ribokinase-like CDO28_RS29175 IPR001088 Glycoside hydrolase, family 4 CDO28_RS29175 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CDO28_RS29175 IPR016040 NAD(P)-binding domain CDO28_RS29175 IPR019802 Glycoside hydrolase, family 4, conserved site CDO28_RS29175 IPR022616 Glycosyl hydrolase, family 4, C-terminal CDO28_RS29180 IPR000524 Transcription regulator HTH, GntR CDO28_RS29180 IPR011663 UbiC transcription regulator-associated CDO28_RS29180 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29180 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CDO28_RS29185 IPR003997 RTX secretion protein D, Gram-negative bacteria CDO28_RS29185 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS29185 IPR010129 Type I secretion membrane fusion protein, HlyD CDO28_RS29185 IPR032317 CDO28_RS29185 CDO28_RS29190 IPR003439 ABC transporter-like CDO28_RS29190 IPR003593 AAA+ ATPase domain CDO28_RS29190 IPR010128 ATPase, type I secretion system, PrtD CDO28_RS29190 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS29190 IPR017871 ABC transporter, conserved site CDO28_RS29190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS29200 IPR007427 Protein of unknown function DUF475 CDO28_RS29205 IPR010385 Protein of unknown function DUF982 CDO28_RS29210 IPR010385 Protein of unknown function DUF982 CDO28_RS29215 IPR010385 Protein of unknown function DUF982 CDO28_RS29220 IPR007251 Low affinity iron permease, Fet4 CDO28_RS29230 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS29230 IPR016040 NAD(P)-binding domain CDO28_RS29240 IPR003477 mRNA interferase PemK-like protein CDO28_RS29240 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CDO28_RS29250 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA CDO28_RS29250 IPR000477 Reverse transcriptase domain CDO28_RS29250 IPR013597 Group II intron, maturase-specific CDO28_RS29250 IPR030931 CDO28_RS29250 CDO28_RS29265 IPR010385 Protein of unknown function DUF982 CDO28_RS29270 IPR000644 CBS domain CDO28_RS29285 IPR009642 Protein of unknown function DUF1236 CDO28_RS29295 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CDO28_RS29295 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS29295 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29295 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS29295 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS29295 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS29295 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS29305 IPR021553 Protein of unknwon function DUF3008 CDO28_RS29310 IPR005828 General substrate transporter CDO28_RS29310 IPR005829 Sugar transporter, conserved site CDO28_RS29310 IPR020846 Major facilitator superfamily domain CDO28_RS29315 IPR002429 Cytochrome c oxidase subunit II C-terminal CDO28_RS29315 IPR006333 Cytochrome o ubiquinol oxidase subunit II CDO28_RS29315 IPR008972 Cupredoxin CDO28_RS29315 IPR010514 COX aromatic rich motif CDO28_RS29315 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CDO28_RS29320 IPR000883 Cytochrome c oxidase subunit I CDO28_RS29320 IPR014207 Cytochrome o ubiquinol oxidase, subunit I CDO28_RS29320 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CDO28_RS29320 IPR023616 Cytochrome c oxidase, subunit I domain CDO28_RS29325 IPR000298 Cytochrome c oxidase subunit III domain CDO28_RS29325 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CDO28_RS29325 IPR014206 Cytochrome o ubiquinol oxidase, subunit III CDO28_RS29330 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CDO28_RS29330 IPR014210 Cytochrome o ubiquinol oxidase subunit IV CDO28_RS29335 IPR002994 Surfeit locus 1/Shy1 CDO28_RS29340 IPR009333 Protein of unknown function DUF992 CDO28_RS29345 IPR010321 Protein of unknown function DUF922 CDO28_RS29350 IPR000485 AsnC-type HTH domain CDO28_RS29350 IPR011008 Dimeric alpha-beta barrel CDO28_RS29350 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29350 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS29350 IPR019888 Transcription regulator AsnC-type CDO28_RS29355 IPR003462 Ornithine cyclodeaminase/mu-crystallin CDO28_RS29355 IPR016040 NAD(P)-binding domain CDO28_RS29355 IPR023401 Ornithine cyclodeaminase, N-terminal CDO28_RS29370 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS29370 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS29370 IPR013858 Peptidase M10 serralysin C-terminal domain CDO28_RS29370 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS29375 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS29375 IPR032317 CDO28_RS29375 CDO28_RS29380 IPR001036 Acriflavin resistance protein CDO28_RS29380 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 CDO28_RS29380 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDO28_RS29385 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS29385 IPR017853 Glycoside hydrolase, superfamily CDO28_RS29390 IPR001173 Glycosyltransferase 2-like CDO28_RS29390 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS29395 IPR017015 Uncharacterised conserved protein UCP033367, VanZ, Bll3170 CDO28_RS29400 IPR001296 Glycosyl transferase, family 1 CDO28_RS29400 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS29405 IPR001296 Glycosyl transferase, family 1 CDO28_RS29405 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS29410 IPR002509 Polysaccharide deacetylase CDO28_RS29410 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS29415 IPR007016 O-antigen ligase-related CDO28_RS29420 IPR003856 Lipopolysaccharide biosynthesis CDO28_RS29420 IPR032807 CDO28_RS29420 CDO28_RS29425 IPR001123 Lysine-type exporter protein (LYSE/YGGA) CDO28_RS29430 IPR002220 DapA-like CDO28_RS29430 IPR013785 Aldolase-type TIM barrel CDO28_RS29440 IPR010985 Ribbon-helix-helix CDO28_RS29440 IPR013321 Arc-type ribbon-helix-helix CDO28_RS29450 IPR002716 PIN domain CDO28_RS29450 IPR029060 PIN domain-like CDO28_RS29460 IPR002797 Polysaccharide biosynthesis protein CDO28_RS29465 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CDO28_RS29465 IPR004556 Modification methylase HemK CDO28_RS29465 IPR007848 Methyltransferase small domain CDO28_RS29465 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS29470 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS29475 IPR005490 L,D-transpeptidase catalytic domain CDO28_RS29480 IPR001633 EAL domain CDO28_RS29490 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS29490 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDO28_RS29495 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS29495 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS29495 IPR011006 CheY-like superfamily CDO28_RS29495 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29495 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS29505 IPR005527 Septum formation topological specificity factor MinE CDO28_RS29510 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDO28_RS29510 IPR010223 ATP binding protein MinD, bacterial-type CDO28_RS29510 IPR025501 ATP binding protein MinD CDO28_RS29510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS29515 IPR005526 Septum formation inhibitor MinC, C-terminal CDO28_RS29515 IPR013033 Septum formation inhibitor MinC CDO28_RS29515 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CDO28_RS29520 IPR009506 Protein of unknown function DUF1127 CDO28_RS29525 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS29535 IPR003694 NAD(+) synthetase CDO28_RS29535 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS29535 IPR022310 NAD/GMP synthase CDO28_RS29535 IPR022926 NH(3)-dependent NAD(+) synthetase CDO28_RS29540 IPR000873 AMP-dependent synthetase/ligase CDO28_RS29540 IPR020845 AMP-binding, conserved site CDO28_RS29540 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS29545 IPR009081 Acyl carrier protein-like CDO28_RS29550 IPR001962 Asparagine synthase CDO28_RS29550 IPR006426 Asparagine synthase, glutamine-hydrolyzing CDO28_RS29550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS29550 IPR017932 Glutamine amidotransferase type 2 domain CDO28_RS29550 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS29565 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase CDO28_RS29565 IPR028973 3-demethylubiquinone-9 3-methyltransferase CDO28_RS29565 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS29575 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS29585 IPR000515 MetI-like domain CDO28_RS29590 IPR000515 MetI-like domain CDO28_RS29595 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CDO28_RS29600 IPR003439 ABC transporter-like CDO28_RS29600 IPR003593 AAA+ ATPase domain CDO28_RS29600 IPR005116 Transport-associated OB, type 1 CDO28_RS29600 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS29600 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS29600 IPR017871 ABC transporter, conserved site CDO28_RS29600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS29605 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS29605 IPR016040 NAD(P)-binding domain CDO28_RS29605 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS29610 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS29610 IPR016040 NAD(P)-binding domain CDO28_RS29615 IPR000524 Transcription regulator HTH, GntR CDO28_RS29615 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS29615 IPR011711 GntR, C-terminal CDO28_RS29615 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29620 IPR001207 Transposase, mutator type CDO28_RS29625 IPR001303 Class II aldolase/adducin N-terminal CDO28_RS29630 IPR000843 Transcription regulator HTH, LacI CDO28_RS29630 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS29630 IPR028082 Periplasmic binding protein-like I CDO28_RS29635 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CDO28_RS29635 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDO28_RS29635 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS29635 IPR013328 Dehydrogenase, multihelical CDO28_RS29635 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CDO28_RS29635 IPR016040 NAD(P)-binding domain CDO28_RS29635 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDO28_RS29640 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS29640 IPR026040 Hydroxypyruvate isomerase-like CDO28_RS29645 IPR010737 Protein of unknown function, DUF1537 CDO28_RS29645 IPR031475 CDO28_RS29645 CDO28_RS29650 IPR025997 Periplasmic binding protein domain CDO28_RS29650 IPR028082 Periplasmic binding protein-like I CDO28_RS29655 IPR001851 ABC transporter, permease CDO28_RS29660 IPR003439 ABC transporter-like CDO28_RS29660 IPR003593 AAA+ ATPase domain CDO28_RS29660 IPR017871 ABC transporter, conserved site CDO28_RS29660 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS29665 IPR000843 Transcription regulator HTH, LacI CDO28_RS29665 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS29665 IPR028082 Periplasmic binding protein-like I CDO28_RS29670 IPR009784 Protein of unknown function DUF1349 CDO28_RS29670 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CDO28_RS29670 IPR015987 Uncharacterised conserved protein UCP022704 CDO28_RS29675 IPR009273 Protein of unknown function DUF930 CDO28_RS29680 IPR007247 Ureidoglycolate hydrolase CDO28_RS29680 IPR011051 RmlC-like cupin domain CDO28_RS29680 IPR023525 Ureidoglycolate hydrolase, bacterial CDO28_RS29680 IPR024060 Ureidoglycolate hydrolase domain CDO28_RS29685 IPR007835 MOFRL domain CDO28_RS29685 IPR025286 MOFRL-associated domain CDO28_RS29690 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CDO28_RS29690 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDO28_RS29690 IPR006398 2-hydroxy-3-oxopropionate reductase CDO28_RS29690 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS29690 IPR013328 Dehydrogenase, multihelical CDO28_RS29690 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CDO28_RS29690 IPR016040 NAD(P)-binding domain CDO28_RS29690 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDO28_RS29695 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS29695 IPR017643 Hydroxypyruvate isomerase CDO28_RS29695 IPR026040 Hydroxypyruvate isomerase-like CDO28_RS29700 IPR006397 Glyoxylate carboligase CDO28_RS29700 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDO28_RS29700 IPR012000 Thiamine pyrophosphate enzyme, central domain CDO28_RS29700 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDO28_RS29700 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS29700 IPR029061 Thiamin diphosphate-binding fold CDO28_RS29705 IPR005471 Transcription regulator IclR, N-terminal CDO28_RS29705 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29705 IPR014757 Transcription regulator IclR, C-terminal CDO28_RS29705 IPR029016 GAF domain-like CDO28_RS29710 IPR000847 Transcription regulator HTH, LysR CDO28_RS29710 IPR005119 LysR, substrate-binding CDO28_RS29710 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29715 IPR011051 RmlC-like cupin domain CDO28_RS29715 IPR013096 Cupin 2, conserved barrel CDO28_RS29715 IPR014710 RmlC-like jelly roll fold CDO28_RS29715 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein CDO28_RS29720 IPR012309 DNA ligase, ATP-dependent, C-terminal CDO28_RS29720 IPR012310 DNA ligase, ATP-dependent, central CDO28_RS29720 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS29720 IPR014143 DNA ligase D CDO28_RS29720 IPR014144 DNA ligase D, 3'-phosphoesterase domain CDO28_RS29720 IPR014145 DNA polymerase LigD, polymerase domain CDO28_RS29720 IPR014146 DNA polymerase LigD, ligase domain CDO28_RS29725 IPR006164 Ku70/Ku80 beta-barrel domain CDO28_RS29725 IPR009187 Predicted Ku, prokaryotic type CDO28_RS29725 IPR016194 SPOC like C-terminal domain CDO28_RS29730 IPR001357 BRCT domain CDO28_RS29730 IPR011990 Tetratricopeptide-like helical domain CDO28_RS29730 IPR019734 Tetratricopeptide repeat CDO28_RS29735 IPR029058 Alpha/Beta hydrolase fold CDO28_RS29740 IPR004808 AP endonuclease 1 CDO28_RS29740 IPR005135 Endonuclease/exonuclease/phosphatase CDO28_RS29740 IPR020847 AP endonuclease 1, binding site CDO28_RS29745 IPR005625 PepSY-associated TM helix CDO28_RS29750 IPR005625 PepSY-associated TM helix CDO28_RS29755 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS29755 IPR016040 NAD(P)-binding domain CDO28_RS29755 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS29760 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS29760 IPR016040 NAD(P)-binding domain CDO28_RS29765 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CDO28_RS29765 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS29775 IPR011979 Conserved hypothetical protein CHP02293 CDO28_RS29775 IPR024467 Domain of unknown function DUF2384 CDO28_RS29780 IPR002933 Peptidase M20 CDO28_RS29780 IPR012166 Uncharacterised protein family RocB CDO28_RS29785 IPR004638 Drug resistance transporter EmrB/QacA subfamily CDO28_RS29785 IPR011701 Major facilitator superfamily CDO28_RS29785 IPR020846 Major facilitator superfamily domain CDO28_RS29790 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS29790 IPR016040 NAD(P)-binding domain CDO28_RS29790 IPR032317 CDO28_RS29790 CDO28_RS29795 IPR011051 RmlC-like cupin domain CDO28_RS29795 IPR013096 Cupin 2, conserved barrel CDO28_RS29795 IPR014710 RmlC-like jelly roll fold CDO28_RS29800 IPR016040 NAD(P)-binding domain CDO28_RS29805 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS29805 IPR011990 Tetratricopeptide-like helical domain CDO28_RS29805 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29805 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS29810 IPR005247 YbhB/YbcL CDO28_RS29810 IPR008914 Phosphatidylethanolamine-binding protein PEBP CDO28_RS29815 IPR001296 Glycosyl transferase, family 1 CDO28_RS29815 IPR011835 Glycogen/starch synthase, ADP-glucose type CDO28_RS29815 IPR013534 Starch synthase, catalytic domain CDO28_RS29820 IPR000620 Drug/metabolite transporter CDO28_RS29825 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS29825 IPR018313 Extracellular solute-binding protein, family 3, conserved site CDO28_RS29830 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS29830 IPR029787 Nucleotide cyclase CDO28_RS29835 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CDO28_RS29835 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CDO28_RS29835 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29835 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CDO28_RS29840 IPR003180 Methylpurine-DNA glycosylase (MPG) CDO28_RS29840 IPR011034 Formyl transferase, C-terminal-like CDO28_RS29845 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CDO28_RS29845 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDO28_RS29845 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS29845 IPR013328 Dehydrogenase, multihelical CDO28_RS29845 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CDO28_RS29845 IPR016040 NAD(P)-binding domain CDO28_RS29845 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDO28_RS29850 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS29850 IPR014621 Uncharacterised conserved protein UCP036778, sugar epimerase-type CDO28_RS29855 IPR025997 Periplasmic binding protein domain CDO28_RS29855 IPR028082 Periplasmic binding protein-like I CDO28_RS29860 IPR003439 ABC transporter-like CDO28_RS29860 IPR003593 AAA+ ATPase domain CDO28_RS29860 IPR017871 ABC transporter, conserved site CDO28_RS29860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS29865 IPR001851 ABC transporter, permease CDO28_RS29870 IPR000847 Transcription regulator HTH, LysR CDO28_RS29870 IPR005119 LysR, substrate-binding CDO28_RS29870 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29875 IPR000620 Drug/metabolite transporter CDO28_RS29880 IPR000843 Transcription regulator HTH, LacI CDO28_RS29880 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS29880 IPR028082 Periplasmic binding protein-like I CDO28_RS29885 IPR003439 ABC transporter-like CDO28_RS29885 IPR003593 AAA+ ATPase domain CDO28_RS29885 IPR017871 ABC transporter, conserved site CDO28_RS29885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS29890 IPR001851 ABC transporter, permease CDO28_RS29895 IPR025997 Periplasmic binding protein domain CDO28_RS29895 IPR028082 Periplasmic binding protein-like I CDO28_RS29900 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS29900 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS29900 IPR013727 Two-component sensor kinase N-terminal CDO28_RS29905 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS29905 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS29905 IPR011006 CheY-like superfamily CDO28_RS29905 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS29915 IPR005064 Bordetella uptake gene CDO28_RS29920 IPR009936 Protein of unknown function DUF1468 CDO28_RS29925 IPR002823 Protein of unknown function DUF112, transmembrane CDO28_RS29945 IPR005546 Autotransporter beta-domain CDO28_RS29945 IPR006315 Outer membrane autotransporter barrel CDO28_RS29950 IPR008146 Glutamine synthetase, catalytic domain CDO28_RS29950 IPR008147 Glutamine synthetase, beta-Grasp CDO28_RS29950 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CDO28_RS29950 IPR027302 Glutamine synthetase, N-terminal conserved site CDO28_RS29950 IPR027303 Glutamine synthetase, glycine-rich site CDO28_RS29955 IPR021232 Protein of unknown function DUF2735 CDO28_RS29960 IPR023198 Phosphoglycolate phosphatase, domain 2 CDO28_RS29960 IPR023214 HAD-like domain CDO28_RS29965 IPR001173 Glycosyltransferase 2-like CDO28_RS29965 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS29970 IPR000669 Mannitol dehydrogenase CDO28_RS29970 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS29970 IPR013118 Mannitol dehydrogenase, C-terminal CDO28_RS29970 IPR013131 Mannitol dehydrogenase, N-terminal CDO28_RS29970 IPR013328 Dehydrogenase, multihelical CDO28_RS29970 IPR016040 NAD(P)-binding domain CDO28_RS29970 IPR023027 Mannitol dehydrogenase, conserved site CDO28_RS29975 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS29975 IPR016040 NAD(P)-binding domain CDO28_RS29975 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS29980 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site CDO28_RS29980 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CDO28_RS29980 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS29980 IPR011548 3-hydroxyisobutyrate dehydrogenase CDO28_RS29980 IPR013328 Dehydrogenase, multihelical CDO28_RS29980 IPR015815 Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type CDO28_RS29980 IPR016040 NAD(P)-binding domain CDO28_RS29980 IPR029154 NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain CDO28_RS29985 IPR029045 ClpP/crotonase-like domain CDO28_RS29985 IPR032259 CDO28_RS29985 CDO28_RS29990 IPR006089 Acyl-CoA dehydrogenase, conserved site CDO28_RS29990 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CDO28_RS29990 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CDO28_RS29990 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CDO28_RS29990 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CDO28_RS29995 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS29995 IPR010359 Protein of unknown function DUF955 CDO28_RS29995 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS29995 IPR018653 Domain of unknown function DUF2083,transcriptional regulator CDO28_RS29995 IPR026281 HTH type transcriptional regulator Rv0465c/Mt0481 CDO28_RS30000 IPR000022 Carboxyl transferase CDO28_RS30000 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CDO28_RS30000 IPR029045 ClpP/crotonase-like domain CDO28_RS30005 IPR000089 Biotin/lipoyl attachment CDO28_RS30005 IPR001882 Biotin-binding site CDO28_RS30005 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CDO28_RS30005 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CDO28_RS30005 IPR005482 Biotin carboxylase, C-terminal CDO28_RS30005 IPR011053 Single hybrid motif CDO28_RS30005 IPR011054 Rudiment single hybrid motif CDO28_RS30005 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS30005 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS30005 IPR016185 Pre-ATP-grasp domain CDO28_RS30010 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic CDO28_RS30010 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic CDO28_RS30010 IPR006158 Cobalamin (vitamin B12)-binding domain CDO28_RS30010 IPR006159 Methylmalonyl-CoA mutase, C-terminal CDO28_RS30010 IPR014348 Cobalamin (vitamin B12)-dependent enzyme, catalytic subdomain CDO28_RS30010 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic CDO28_RS30015 IPR000524 Transcription regulator HTH, GntR CDO28_RS30015 IPR011663 UbiC transcription regulator-associated CDO28_RS30015 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30015 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF CDO28_RS30015 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CDO28_RS30020 IPR009609 Phosphonate metabolism PhnG CDO28_RS30025 IPR008772 Bacterial phosphonate metabolism, PhnH CDO28_RS30030 IPR008773 Phosphonate metabolism protein PhnI CDO28_RS30035 IPR010306 Phosphonate metabolism PhnJ CDO28_RS30040 IPR003439 ABC transporter-like CDO28_RS30040 IPR003593 AAA+ ATPase domain CDO28_RS30040 IPR012700 Phosphonate C-P lyase system, PhnK CDO28_RS30040 IPR017871 ABC transporter, conserved site CDO28_RS30040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30045 IPR003439 ABC transporter-like CDO28_RS30045 IPR003593 AAA+ ATPase domain CDO28_RS30045 IPR012701 Phosphonate C-P lyase system, PhnL CDO28_RS30045 IPR017871 ABC transporter, conserved site CDO28_RS30045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30050 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS30050 IPR011004 Trimeric LpxA-like CDO28_RS30050 IPR017694 Phosphonate metabolim protein, transferase hexapeptide repeat family CDO28_RS30050 IPR018357 Hexapeptide transferase, conserved site CDO28_RS30055 IPR004006 Dak kinase CDO28_RS30055 IPR004007 DhaL domain CDO28_RS30060 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS30065 IPR002823 Protein of unknown function DUF112, transmembrane CDO28_RS30070 IPR009936 Protein of unknown function DUF1468 CDO28_RS30075 IPR005064 Bordetella uptake gene CDO28_RS30080 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA CDO28_RS30080 IPR024084 Isopropylmalate dehydrogenase-like domain CDO28_RS30085 IPR000524 Transcription regulator HTH, GntR CDO28_RS30085 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS30085 IPR011711 GntR, C-terminal CDO28_RS30085 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30095 IPR000531 TonB-dependent receptor, beta-barrel CDO28_RS30095 IPR006860 FecR protein CDO28_RS30095 IPR011990 Tetratricopeptide-like helical domain CDO28_RS30095 IPR019734 Tetratricopeptide repeat CDO28_RS30100 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS30100 IPR007890 CHASE2 CDO28_RS30100 IPR029787 Nucleotide cyclase CDO28_RS30105 IPR003439 ABC transporter-like CDO28_RS30105 IPR003593 AAA+ ATPase domain CDO28_RS30105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30110 IPR003439 ABC transporter-like CDO28_RS30110 IPR003593 AAA+ ATPase domain CDO28_RS30110 IPR017871 ABC transporter, conserved site CDO28_RS30110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30110 IPR032823 CDO28_RS30110 CDO28_RS30115 IPR001851 ABC transporter, permease CDO28_RS30120 IPR001851 ABC transporter, permease CDO28_RS30125 IPR000709 Leu/Ile/Val-binding protein CDO28_RS30125 IPR028081 Leucine-binding protein domain CDO28_RS30125 IPR028082 Periplasmic binding protein-like I CDO28_RS30130 IPR003439 ABC transporter-like CDO28_RS30130 IPR003593 AAA+ ATPase domain CDO28_RS30130 IPR017871 ABC transporter, conserved site CDO28_RS30130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30135 IPR015168 SsuA/THI5-like CDO28_RS30140 IPR000515 MetI-like domain CDO28_RS30145 IPR011251 Luciferase-like domain CDO28_RS30145 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A CDO28_RS30150 IPR005025 NADPH-dependent FMN reductase-like CDO28_RS30150 IPR019912 FMN reductase, MsuE-like CDO28_RS30150 IPR029039 Flavoprotein-like CDO28_RS30155 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CDO28_RS30155 IPR012767 Malto-oligosyltrehalose synthase CDO28_RS30155 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS30155 IPR013797 Maltooligosyl trehalose synthase, N-terminal CDO28_RS30155 IPR017853 Glycoside hydrolase, superfamily CDO28_RS30160 IPR000362 Fumarate lyase family CDO28_RS30160 IPR008948 L-Aspartase-like CDO28_RS30160 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase CDO28_RS30160 IPR020557 Fumarate lyase, conserved site CDO28_RS30160 IPR022761 Fumarate lyase, N-terminal CDO28_RS30160 IPR024083 Fumarase/histidase, N-terminal CDO28_RS30165 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal CDO28_RS30165 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit CDO28_RS30165 IPR015889 Intradiol ring-cleavage dioxygenase, core CDO28_RS30170 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal CDO28_RS30170 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit CDO28_RS30170 IPR015889 Intradiol ring-cleavage dioxygenase, core CDO28_RS30170 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal CDO28_RS30175 IPR003779 Carboxymuconolactone decarboxylase-like CDO28_RS30175 IPR012788 4-carboxymuconolactone decarboxylase CDO28_RS30175 IPR029032 AhpD-like CDO28_RS30180 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS30180 IPR022742 Putative lysophospholipase CDO28_RS30180 IPR026968 3-oxoadipate enol-lactonase 1/2 CDO28_RS30180 IPR029058 Alpha/Beta hydrolase fold CDO28_RS30185 IPR000847 Transcription regulator HTH, LysR CDO28_RS30185 IPR005119 LysR, substrate-binding CDO28_RS30185 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30185 IPR012787 Pca transcription factor PcaQ CDO28_RS30190 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS30190 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS30190 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS30195 IPR000847 Transcription regulator HTH, LysR CDO28_RS30195 IPR005119 LysR, substrate-binding CDO28_RS30195 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30200 IPR002938 Monooxygenase, FAD-binding CDO28_RS30200 IPR012733 4-hydroxybenzoate 3-monooxygenase CDO28_RS30200 IPR016040 NAD(P)-binding domain CDO28_RS30200 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS30205 IPR000572 Oxidoreductase, molybdopterin-binding domain CDO28_RS30210 IPR000101 Gamma-glutamyltranspeptidase CDO28_RS30210 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS30215 IPR005471 Transcription regulator IclR, N-terminal CDO28_RS30215 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30215 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR CDO28_RS30215 IPR014757 Transcription regulator IclR, C-terminal CDO28_RS30215 IPR029016 GAF domain-like CDO28_RS30220 IPR004165 Coenzyme A transferase family I CDO28_RS30225 IPR004165 Coenzyme A transferase family I CDO28_RS30230 IPR002155 Thiolase CDO28_RS30230 IPR012793 Beta-ketoadipyl CoA thiolase CDO28_RS30230 IPR016039 Thiolase-like CDO28_RS30230 IPR020613 Thiolase, conserved site CDO28_RS30230 IPR020615 Thiolase, acyl-enzyme intermediate active site CDO28_RS30230 IPR020616 Thiolase, N-terminal CDO28_RS30230 IPR020617 Thiolase, C-terminal CDO28_RS30235 IPR001792 Acylphosphatase-like domain CDO28_RS30235 IPR017968 Acylphosphatase, conserved site CDO28_RS30235 IPR020456 Acylphosphatase CDO28_RS30240 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CDO28_RS30240 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS30240 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30240 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS30240 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS30240 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS30240 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS30245 IPR012347 Ferritin-related CDO28_RS30245 IPR025419 Domain of unknown function DUF4142 CDO28_RS30250 IPR008972 Cupredoxin CDO28_RS30250 IPR028096 EfeO-type cupredoxin-like domain CDO28_RS30255 IPR002543 FtsK domain CDO28_RS30255 IPR003593 AAA+ ATPase domain CDO28_RS30255 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30255 IPR018541 FtsK gamma domain CDO28_RS30255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30265 IPR032808 CDO28_RS30265 CDO28_RS30270 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDO28_RS30270 IPR017818 Plasmid partitioning protein, RepA CDO28_RS30270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30275 IPR003115 ParB/Sulfiredoxin CDO28_RS30275 IPR004437 ParB/RepB/Spo0J partition protein family CDO28_RS30275 IPR011111 RepB plasmid partition CDO28_RS30275 IPR017819 Plasmid partitioning protein, RepB CDO28_RS30285 IPR003439 ABC transporter-like CDO28_RS30285 IPR003593 AAA+ ATPase domain CDO28_RS30285 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE CDO28_RS30285 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30290 IPR003439 ABC transporter-like CDO28_RS30290 IPR003593 AAA+ ATPase domain CDO28_RS30290 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CDO28_RS30290 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30290 IPR032823 CDO28_RS30290 CDO28_RS30295 IPR001851 ABC transporter, permease CDO28_RS30295 IPR017778 ABC transporter, urea, permease protein, UrtC CDO28_RS30300 IPR001851 ABC transporter, permease CDO28_RS30300 IPR017779 ABC transporter, urea, permease protein, UrtB CDO28_RS30305 IPR017777 ABC transporter, urea, substrate-binding, UrtA CDO28_RS30305 IPR028082 Periplasmic binding protein-like I CDO28_RS30310 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS30310 IPR011057 Mss4-like CDO28_RS30315 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDO28_RS30315 IPR023393 START-like domain CDO28_RS30320 IPR001845 HTH ArsR-type DNA-binding domain CDO28_RS30320 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30330 IPR009959 Polyketide cyclase SnoaL-like domain CDO28_RS30330 IPR032710 CDO28_RS30330 CDO28_RS30335 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS30335 IPR001660 Sterile alpha motif domain CDO28_RS30335 IPR011990 Tetratricopeptide-like helical domain CDO28_RS30335 IPR013761 Sterile alpha motif/pointed domain CDO28_RS30335 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30335 IPR029787 Nucleotide cyclase CDO28_RS30340 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS30340 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS30340 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS30340 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS30340 IPR011006 CheY-like superfamily CDO28_RS30345 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS30345 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS30345 IPR011006 CheY-like superfamily CDO28_RS30345 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30345 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS30350 IPR001991 Sodium:dicarboxylate symporter CDO28_RS30350 IPR018107 Sodium:dicarboxylate symporter, conserved site CDO28_RS30350 IPR023954 C4-dicarboxylate transport protein CDO28_RS30355 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS30355 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS30355 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS30355 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CDO28_RS30355 IPR029151 Periplasmic sensor domain-like CDO28_RS30360 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS30360 IPR002078 RNA polymerase sigma factor 54 interaction domain CDO28_RS30360 IPR002197 DNA binding HTH domain, Fis-type CDO28_RS30360 IPR003593 AAA+ ATPase domain CDO28_RS30360 IPR009057 Homeodomain-like CDO28_RS30360 IPR011006 CheY-like superfamily CDO28_RS30360 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDO28_RS30360 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDO28_RS30360 IPR025944 Sigma-54 interaction domain, conserved site CDO28_RS30360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30370 IPR002817 Thiamine biosynthesis protein ThiC CDO28_RS30370 IPR025747 ThiC-associated domain CDO28_RS30375 IPR006076 FAD dependent oxidoreductase CDO28_RS30375 IPR012727 Glycine oxidase ThiO CDO28_RS30375 IPR016040 NAD(P)-binding domain CDO28_RS30380 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CDO28_RS30380 IPR010035 ThiS, thiamine-biosynthesis CDO28_RS30380 IPR012675 Beta-grasp domain CDO28_RS30380 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CDO28_RS30385 IPR008867 Thiazole biosynthesis CDO28_RS30385 IPR013785 Aldolase-type TIM barrel CDO28_RS30390 IPR003733 Thiamine phosphate synthase CDO28_RS30390 IPR013785 Aldolase-type TIM barrel CDO28_RS30390 IPR022998 Thiamin phosphate synthase superfamily CDO28_RS30395 IPR011701 Major facilitator superfamily CDO28_RS30395 IPR020846 Major facilitator superfamily domain CDO28_RS30400 IPR009057 Homeodomain-like CDO28_RS30400 IPR011051 RmlC-like cupin domain CDO28_RS30400 IPR014710 RmlC-like jelly roll fold CDO28_RS30400 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS30400 IPR018062 HTH domain AraC-type, conserved site CDO28_RS30400 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS30400 IPR032783 CDO28_RS30400 CDO28_RS30405 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CDO28_RS30410 IPR002145 Ribbon-helix-helix protein, copG CDO28_RS30410 IPR010985 Ribbon-helix-helix CDO28_RS30415 IPR011660 Rv0623-like transcription factor CDO28_RS30420 IPR003439 ABC transporter-like CDO28_RS30420 IPR003593 AAA+ ATPase domain CDO28_RS30420 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS30420 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS30420 IPR013611 Transport-associated OB, type 2 CDO28_RS30420 IPR017871 ABC transporter, conserved site CDO28_RS30420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30425 IPR008928 Six-hairpin glycosidase-like CDO28_RS30425 IPR012341 Six-hairpin glycosidase CDO28_RS30425 IPR012878 Protein of unknown function DUF1680 CDO28_RS30430 IPR000515 MetI-like domain CDO28_RS30435 IPR000515 MetI-like domain CDO28_RS30445 IPR000843 Transcription regulator HTH, LacI CDO28_RS30445 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS30445 IPR028082 Periplasmic binding protein-like I CDO28_RS30450 IPR005097 Saccharopine dehydrogenase / Homospermidine synthase CDO28_RS30450 IPR016040 NAD(P)-binding domain CDO28_RS30450 IPR032095 CDO28_RS30450 CDO28_RS30455 IPR005730 Carboxynorspermidine decarboxylase CDO28_RS30455 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDO28_RS30455 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CDO28_RS30455 IPR029066 PLP-binding barrel CDO28_RS30460 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CDO28_RS30460 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CDO28_RS30460 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS30460 IPR013328 Dehydrogenase, multihelical CDO28_RS30460 IPR016040 NAD(P)-binding domain CDO28_RS30465 IPR001753 Crotonase superfamily CDO28_RS30465 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB CDO28_RS30465 IPR014748 Crontonase, C-terminal CDO28_RS30465 IPR029045 ClpP/crotonase-like domain CDO28_RS30470 IPR006683 Thioesterase superfamily CDO28_RS30470 IPR029069 HotDog domain CDO28_RS30475 IPR002539 MaoC-like domain CDO28_RS30475 IPR011966 Phenylacetic acid degradation protein PaaN CDO28_RS30475 IPR015590 Aldehyde dehydrogenase domain CDO28_RS30475 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS30475 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS30475 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS30475 IPR029069 HotDog domain CDO28_RS30480 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS30480 IPR001433 Oxidoreductase FAD/NAD(P)-binding CDO28_RS30480 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CDO28_RS30480 IPR001834 NADH:cytochrome b5 reductase (CBR) CDO28_RS30480 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS30480 IPR008333 Oxidoreductase, FAD-binding domain CDO28_RS30480 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit CDO28_RS30480 IPR012675 Beta-grasp domain CDO28_RS30480 IPR017938 Riboflavin synthase-like beta-barrel CDO28_RS30485 IPR002744 Domain of unknown function DUF59 CDO28_RS30485 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit CDO28_RS30490 IPR007814 Phenylacetic acid catabolic CDO28_RS30490 IPR009078 Ferritin-like superfamily CDO28_RS30490 IPR011882 Phenylacetate-CoA oxygenase, PaaI subunit CDO28_RS30490 IPR012347 Ferritin-related CDO28_RS30495 IPR009359 Phenylacetic acid degradation B CDO28_RS30500 IPR007814 Phenylacetic acid catabolic CDO28_RS30500 IPR009078 Ferritin-like superfamily CDO28_RS30500 IPR011881 Phenylacetate-CoA oxygenase, PaaG subunit CDO28_RS30500 IPR012347 Ferritin-related CDO28_RS30505 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX CDO28_RS30505 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30505 IPR012906 PaaX-like, N-terminal CDO28_RS30505 IPR013225 PaaX-like, C-terminal CDO28_RS30510 IPR009333 Protein of unknown function DUF992 CDO28_RS30515 IPR001088 Glycoside hydrolase, family 4 CDO28_RS30515 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CDO28_RS30515 IPR016040 NAD(P)-binding domain CDO28_RS30515 IPR019802 Glycoside hydrolase, family 4, conserved site CDO28_RS30515 IPR022616 Glycosyl hydrolase, family 4, C-terminal CDO28_RS30520 IPR003439 ABC transporter-like CDO28_RS30520 IPR003593 AAA+ ATPase domain CDO28_RS30520 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS30520 IPR017871 ABC transporter, conserved site CDO28_RS30520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30525 IPR000515 MetI-like domain CDO28_RS30525 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CDO28_RS30530 IPR000515 MetI-like domain CDO28_RS30535 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS30540 IPR001088 Glycoside hydrolase, family 4 CDO28_RS30540 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CDO28_RS30540 IPR016040 NAD(P)-binding domain CDO28_RS30540 IPR019802 Glycoside hydrolase, family 4, conserved site CDO28_RS30540 IPR022616 Glycosyl hydrolase, family 4, C-terminal CDO28_RS30545 IPR003313 AraC-type arabinose-binding/dimerisation domain CDO28_RS30545 IPR009057 Homeodomain-like CDO28_RS30545 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS30545 IPR018062 HTH domain AraC-type, conserved site CDO28_RS30545 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS30550 IPR000843 Transcription regulator HTH, LacI CDO28_RS30550 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS30550 IPR028082 Periplasmic binding protein-like I CDO28_RS30555 IPR002716 PIN domain CDO28_RS30555 IPR022907 VapC family CDO28_RS30555 IPR029060 PIN domain-like CDO28_RS30560 IPR011660 Rv0623-like transcription factor CDO28_RS30570 IPR000515 MetI-like domain CDO28_RS30575 IPR000515 MetI-like domain CDO28_RS30580 IPR006101 Glycoside hydrolase, family 2 CDO28_RS30580 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich CDO28_RS30580 IPR006103 Glycoside hydrolase, family 2, TIM barrel CDO28_RS30580 IPR006104 Glycosyl hydrolases family 2, sugar binding domain CDO28_RS30580 IPR008979 Galactose-binding domain-like CDO28_RS30580 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS30580 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain CDO28_RS30580 IPR017853 Glycoside hydrolase, superfamily CDO28_RS30580 IPR023230 Glycoside hydrolase, family 2, conserved site CDO28_RS30580 IPR023232 Glycoside hydrolase, family 2, active site CDO28_RS30590 IPR000304 Pyrroline-5-carboxylate reductase CDO28_RS30590 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS30590 IPR016040 NAD(P)-binding domain CDO28_RS30590 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDO28_RS30590 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CDO28_RS30595 IPR000847 Transcription regulator HTH, LysR CDO28_RS30595 IPR005119 LysR, substrate-binding CDO28_RS30595 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30600 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS30600 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS30600 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS30600 IPR012336 Thioredoxin-like fold CDO28_RS30605 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain CDO28_RS30605 IPR012349 FMN-binding split barrel CDO28_RS30610 IPR002226 Catalase haem-binding site CDO28_RS30610 IPR010582 Catalase immune-responsive domain CDO28_RS30610 IPR011614 Catalase core domain CDO28_RS30610 IPR018028 Catalase, mono-functional, haem-containing CDO28_RS30610 IPR020835 Catalase-like domain CDO28_RS30610 IPR024708 Catalase active site CDO28_RS30610 IPR024712 Catalase, mono-functional, haem-containing, clade 2 CDO28_RS30610 IPR029062 Class I glutamine amidotransferase-like CDO28_RS30615 IPR012309 DNA ligase, ATP-dependent, C-terminal CDO28_RS30615 IPR012310 DNA ligase, ATP-dependent, central CDO28_RS30615 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS30620 IPR000847 Transcription regulator HTH, LysR CDO28_RS30620 IPR005119 LysR, substrate-binding CDO28_RS30620 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30625 IPR022742 Putative lysophospholipase CDO28_RS30625 IPR029058 Alpha/Beta hydrolase fold CDO28_RS30630 IPR003689 Zinc/iron permease CDO28_RS30635 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS30635 IPR005530 SPW repeat CDO28_RS30635 IPR012932 Vitamin K epoxide reductase CDO28_RS30635 IPR016040 NAD(P)-binding domain CDO28_RS30640 IPR000683 Oxidoreductase, N-terminal CDO28_RS30640 IPR016040 NAD(P)-binding domain CDO28_RS30645 IPR000843 Transcription regulator HTH, LacI CDO28_RS30645 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS30645 IPR028082 Periplasmic binding protein-like I CDO28_RS30650 IPR001851 ABC transporter, permease CDO28_RS30655 IPR001851 ABC transporter, permease CDO28_RS30660 IPR003439 ABC transporter-like CDO28_RS30660 IPR003593 AAA+ ATPase domain CDO28_RS30660 IPR017871 ABC transporter, conserved site CDO28_RS30660 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30670 IPR025997 Periplasmic binding protein domain CDO28_RS30670 IPR028082 Periplasmic binding protein-like I CDO28_RS30675 IPR000089 Biotin/lipoyl attachment CDO28_RS30675 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CDO28_RS30675 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CDO28_RS30675 IPR004167 E3 binding CDO28_RS30675 IPR011053 Single hybrid motif CDO28_RS30675 IPR023213 Chloramphenicol acetyltransferase-like domain CDO28_RS30680 IPR001017 Dehydrogenase, E1 component CDO28_RS30680 IPR005475 Transketolase-like, pyrimidine-binding domain CDO28_RS30680 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CDO28_RS30680 IPR029061 Thiamin diphosphate-binding fold CDO28_RS30680 IPR033248 CDO28_RS30680 CDO28_RS30685 IPR000485 AsnC-type HTH domain CDO28_RS30685 IPR011008 Dimeric alpha-beta barrel CDO28_RS30685 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30685 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS30685 IPR019888 Transcription regulator AsnC-type CDO28_RS30700 IPR002925 Dienelactone hydrolase CDO28_RS30700 IPR029058 Alpha/Beta hydrolase fold CDO28_RS30705 IPR002821 Hydantoinase/oxoprolinase CDO28_RS30705 IPR003692 Hydantoinase B/oxoprolinase CDO28_RS30705 IPR008040 Hydantoinaseoxoprolinase, N-terminal CDO28_RS30710 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CDO28_RS30710 IPR002942 RNA-binding S4 domain CDO28_RS30710 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CDO28_RS30710 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CDO28_RS30710 IPR020103 Pseudouridine synthase, catalytic domain CDO28_RS30715 IPR005064 Bordetella uptake gene CDO28_RS30720 IPR009936 Protein of unknown function DUF1468 CDO28_RS30725 IPR002823 Protein of unknown function DUF112, transmembrane CDO28_RS30730 IPR003199 Choloylglycine hydrolase/Peptidase C59 family CDO28_RS30730 IPR005079 Peptidase C45 CDO28_RS30730 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS30735 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDO28_RS30740 IPR003779 Carboxymuconolactone decarboxylase-like CDO28_RS30740 IPR004675 Alkylhydroperoxidase AhpD core CDO28_RS30740 IPR029032 AhpD-like CDO28_RS30745 IPR007627 RNA polymerase sigma-70 region 2 CDO28_RS30745 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30745 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS30745 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS30745 IPR013325 RNA polymerase sigma factor, region 2 CDO28_RS30745 IPR014284 RNA polymerase sigma-70 like domain CDO28_RS30745 IPR032710 CDO28_RS30745 CDO28_RS30750 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CDO28_RS30750 IPR015943 WD40/YVTN repeat-like-containing domain CDO28_RS30755 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS30755 IPR009057 Homeodomain-like CDO28_RS30755 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS30755 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS30760 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS30765 IPR004681 TRAP transporter permease protein CDO28_RS30765 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS30770 IPR004682 TRAP dicarboxylate transporter CDO28_RS30770 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS30775 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CDO28_RS30775 IPR016040 NAD(P)-binding domain CDO28_RS30790 IPR000524 Transcription regulator HTH, GntR CDO28_RS30790 IPR004839 Aminotransferase, class I/classII CDO28_RS30790 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30790 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS30790 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS30790 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS30795 IPR000620 Drug/metabolite transporter CDO28_RS30805 IPR011670 Protein of unknown function DUF1612 CDO28_RS30805 IPR021068 HTH DNA binding domain CDO28_RS30810 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS30815 IPR005090 Replication protein C CDO28_RS30815 IPR021760 Replication protein-C C-terminal CDO28_RS30820 IPR003115 ParB/Sulfiredoxin CDO28_RS30820 IPR004437 ParB/RepB/Spo0J partition protein family CDO28_RS30820 IPR011111 RepB plasmid partition CDO28_RS30820 IPR017819 Plasmid partitioning protein, RepB CDO28_RS30825 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDO28_RS30825 IPR017818 Plasmid partitioning protein, RepA CDO28_RS30825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30835 IPR000524 Transcription regulator HTH, GntR CDO28_RS30835 IPR010248 Histidine utilization repressor CDO28_RS30835 IPR011663 UbiC transcription regulator-associated CDO28_RS30835 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30835 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CDO28_RS30840 IPR000640 Translation elongation factor EFG, V domain CDO28_RS30840 IPR005517 Translation elongation factor EFG/EF2, domain IV CDO28_RS30840 IPR009022 Elongation factor G, III-V domain CDO28_RS30840 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CDO28_RS30840 IPR020568 Ribosomal protein S5 domain 2-type fold CDO28_RS30840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30850 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS30850 IPR029058 Alpha/Beta hydrolase fold CDO28_RS30855 IPR002818 ThiJ/PfpI CDO28_RS30855 IPR009057 Homeodomain-like CDO28_RS30855 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS30855 IPR020449 Transcription regulator HTH, AraC- type CDO28_RS30855 IPR029062 Class I glutamine amidotransferase-like CDO28_RS30865 IPR002491 ABC transporter periplasmic binding domain CDO28_RS30870 IPR000522 ABC transporter, permease protein CDO28_RS30870 IPR029022 ABC transporter, BtuC-like CDO28_RS30875 IPR003439 ABC transporter-like CDO28_RS30875 IPR003593 AAA+ ATPase domain CDO28_RS30875 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS30880 IPR013216 Methyltransferase type 11 CDO28_RS30880 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS30900 IPR010985 Ribbon-helix-helix CDO28_RS30900 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor CDO28_RS30905 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CDO28_RS30905 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 CDO28_RS30910 IPR009057 Homeodomain-like CDO28_RS30925 IPR005175 Domain of unknown function DUF296 CDO28_RS30925 IPR025707 Predicted DNA-binding protein with PD1-like DNA-binding motif CDO28_RS30930 IPR009923 Dodecin CDO28_RS30930 IPR025543 Dodecin-like CDO28_RS30935 IPR001463 Sodium:alanine symporter CDO28_RS30940 IPR002645 STAS domain CDO28_RS30940 IPR011547 Sulphate transporter CDO28_RS30945 IPR011701 Major facilitator superfamily CDO28_RS30945 IPR020846 Major facilitator superfamily domain CDO28_RS30950 IPR025997 Periplasmic binding protein domain CDO28_RS30950 IPR028082 Periplasmic binding protein-like I CDO28_RS30955 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS30955 IPR016040 NAD(P)-binding domain CDO28_RS30955 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS30970 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS30970 IPR016040 NAD(P)-binding domain CDO28_RS30970 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS30975 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS30975 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CDO28_RS30980 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS30980 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS30980 IPR011006 CheY-like superfamily CDO28_RS30980 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS30980 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS30990 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS30990 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS30990 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS30995 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS30995 IPR011032 GroES (chaperonin 10)-like CDO28_RS30995 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS30995 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS30995 IPR016040 NAD(P)-binding domain CDO28_RS30995 IPR020843 Polyketide synthase, enoylreductase CDO28_RS30995 IPR027399 Alcohol dehydrogenase GroES-associated N-terminal domain CDO28_RS31000 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS31000 IPR016538 Uncharacterised conserved protein UCP008292, metallophosphoesterase CDO28_RS31000 IPR029052 Metallo-dependent phosphatase-like CDO28_RS31015 IPR009760 Protein of unknown function DUF1328 CDO28_RS31030 IPR025711 PepSY domain CDO28_RS31040 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase CDO28_RS31040 IPR007815 Erythromycin esterase CDO28_RS31040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS31055 IPR009078 Ferritin-like superfamily CDO28_RS31055 IPR010287 Domain of unknown function DUF892 CDO28_RS31055 IPR012347 Ferritin-related CDO28_RS31060 IPR005135 Endonuclease/exonuclease/phosphatase CDO28_RS31065 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CDO28_RS31070 IPR001736 Phospholipase D/Transphosphatidylase CDO28_RS31070 IPR025202 Phospholipase D-like domain CDO28_RS31075 IPR000399 TPP-binding enzyme, conserved site CDO28_RS31075 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CDO28_RS31075 IPR012000 Thiamine pyrophosphate enzyme, central domain CDO28_RS31075 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CDO28_RS31075 IPR029035 DHS-like NAD/FAD-binding domain CDO28_RS31075 IPR029061 Thiamin diphosphate-binding fold CDO28_RS31080 IPR009794 Protein of unknown function DUF1362 CDO28_RS31085 IPR006094 FAD linked oxidase, N-terminal CDO28_RS31085 IPR007173 D-arabinono-1,4-lactone oxidase CDO28_RS31085 IPR016166 FAD-binding, type 2 CDO28_RS31085 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS31085 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS31090 IPR009794 Protein of unknown function DUF1362 CDO28_RS31095 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CDO28_RS31095 IPR013780 Glycosyl hydrolase, family 13, all-beta CDO28_RS31095 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS31095 IPR017853 Glycoside hydrolase, superfamily CDO28_RS31100 IPR011251 Luciferase-like domain CDO28_RS31100 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related CDO28_RS31100 IPR023907 Non-F420 flavinoid oxidoreductase CDO28_RS31105 IPR001613 Flavin amine oxidase CDO28_RS31105 IPR006076 FAD dependent oxidoreductase CDO28_RS31105 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS31110 IPR002078 RNA polymerase sigma factor 54 interaction domain CDO28_RS31110 IPR002197 DNA binding HTH domain, Fis-type CDO28_RS31110 IPR003593 AAA+ ATPase domain CDO28_RS31110 IPR009057 Homeodomain-like CDO28_RS31110 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CDO28_RS31110 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CDO28_RS31110 IPR025944 Sigma-54 interaction domain, conserved site CDO28_RS31110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31110 IPR029016 GAF domain-like CDO28_RS31115 IPR009959 Polyketide cyclase SnoaL-like domain CDO28_RS31115 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS31115 IPR032710 CDO28_RS31115 CDO28_RS31120 IPR002781 Transmembrane protein TauE like CDO28_RS31125 IPR000485 AsnC-type HTH domain CDO28_RS31125 IPR000524 Transcription regulator HTH, GntR CDO28_RS31125 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS31125 IPR011711 GntR, C-terminal CDO28_RS31125 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31130 IPR000524 Transcription regulator HTH, GntR CDO28_RS31130 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS31130 IPR011711 GntR, C-terminal CDO28_RS31130 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31135 IPR002220 DapA-like CDO28_RS31135 IPR013785 Aldolase-type TIM barrel CDO28_RS31140 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS31140 IPR030678 CDO28_RS31140 CDO28_RS31145 IPR000515 MetI-like domain CDO28_RS31150 IPR000515 MetI-like domain CDO28_RS31155 IPR003439 ABC transporter-like CDO28_RS31155 IPR003593 AAA+ ATPase domain CDO28_RS31155 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS31155 IPR017871 ABC transporter, conserved site CDO28_RS31155 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31160 IPR000620 Drug/metabolite transporter CDO28_RS31165 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDO28_RS31165 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS31165 IPR016040 NAD(P)-binding domain CDO28_RS31170 IPR005493 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase CDO28_RS31175 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CDO28_RS31175 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDO28_RS31175 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CDO28_RS31180 IPR008928 Six-hairpin glycosidase-like CDO28_RS31180 IPR032790 CDO28_RS31180 CDO28_RS31180 IPR032856 CDO28_RS31180 CDO28_RS31185 IPR001296 Glycosyl transferase, family 1 CDO28_RS31185 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS31190 IPR013785 Aldolase-type TIM barrel CDO28_RS31195 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS31195 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS31200 IPR006119 Resolvase, N-terminal CDO28_RS31210 IPR010985 Ribbon-helix-helix CDO28_RS31210 IPR013321 Arc-type ribbon-helix-helix CDO28_RS31210 IPR022789 Uncharacterised protein family UPF0156/MetJ /Arc repressor CDO28_RS31220 IPR000847 Transcription regulator HTH, LysR CDO28_RS31220 IPR005119 LysR, substrate-binding CDO28_RS31220 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31225 IPR003439 ABC transporter-like CDO28_RS31225 IPR003593 AAA+ ATPase domain CDO28_RS31225 IPR017871 ABC transporter, conserved site CDO28_RS31225 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31230 IPR001851 ABC transporter, permease CDO28_RS31235 IPR001851 ABC transporter, permease CDO28_RS31240 IPR003760 Basic membrane lipoprotein CDO28_RS31240 IPR028082 Periplasmic binding protein-like I CDO28_RS31245 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS31245 IPR013108 Amidohydrolase 3 CDO28_RS31245 IPR032466 CDO28_RS31245 CDO28_RS31250 IPR000524 Transcription regulator HTH, GntR CDO28_RS31250 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS31250 IPR011711 GntR, C-terminal CDO28_RS31250 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31255 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDO28_RS31255 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDO28_RS31255 IPR016166 FAD-binding, type 2 CDO28_RS31255 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS31255 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS31260 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS31260 IPR002888 [2Fe-2S]-binding CDO28_RS31260 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS31260 IPR012675 Beta-grasp domain CDO28_RS31265 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS31265 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS31270 IPR003495 CobW/HypB/UreG domain CDO28_RS31270 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CDO28_RS31270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31275 IPR006042 Xanthine/uracil permease CDO28_RS31275 IPR006043 Xanthine/uracil/vitamin C permease CDO28_RS31275 IPR017588 Xanthine permease CDO28_RS31280 IPR003382 Flavoprotein CDO28_RS31280 IPR004507 Decarboxylase UbiX/Pad1 CDO28_RS31285 IPR002830 UbiD decarboxylyase family CDO28_RS31285 IPR012349 FMN-binding split barrel CDO28_RS31290 IPR006680 Amidohydrolase 1 CDO28_RS31290 IPR032466 CDO28_RS31290 CDO28_RS31295 IPR006680 Amidohydrolase 1 CDO28_RS31295 IPR032466 CDO28_RS31295 CDO28_RS31300 IPR018719 Protein of unknown function DUF2243, membrane CDO28_RS31305 IPR002220 DapA-like CDO28_RS31305 IPR013785 Aldolase-type TIM barrel CDO28_RS31305 IPR020625 Dihydrodipicolinate synthetase, active site CDO28_RS31310 IPR003439 ABC transporter-like CDO28_RS31310 IPR003593 AAA+ ATPase domain CDO28_RS31310 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS31310 IPR017871 ABC transporter, conserved site CDO28_RS31310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31315 IPR000515 MetI-like domain CDO28_RS31320 IPR000515 MetI-like domain CDO28_RS31325 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS31325 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CDO28_RS31325 IPR030678 CDO28_RS31325 CDO28_RS31330 IPR011040 Sialidases CDO28_RS31335 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA CDO28_RS31335 IPR024084 Isopropylmalate dehydrogenase-like domain CDO28_RS31340 IPR001670 Alcohol dehydrogenase, iron-type CDO28_RS31340 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CDO28_RS31345 IPR000524 Transcription regulator HTH, GntR CDO28_RS31345 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS31345 IPR011711 GntR, C-terminal CDO28_RS31345 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31350 IPR010737 Protein of unknown function, DUF1537 CDO28_RS31350 IPR031475 CDO28_RS31350 CDO28_RS31355 IPR000760 Inositol monophosphatase CDO28_RS31355 IPR020583 Inositol monophosphatase, metal-binding site CDO28_RS31355 IPR022337 Inositol monophosphatase, SuhB CDO28_RS31360 IPR000340 Dual specificity phosphatase, catalytic domain CDO28_RS31360 IPR029021 Protein-tyrosine phosphatase-like CDO28_RS31365 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CDO28_RS31365 IPR029052 Metallo-dependent phosphatase-like CDO28_RS31370 IPR003841 Sodium-dependent phosphate transport protein CDO28_RS31370 IPR026022 PhoU domain CDO28_RS31375 IPR000843 Transcription regulator HTH, LacI CDO28_RS31375 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS31375 IPR028082 Periplasmic binding protein-like I CDO28_RS31380 IPR000515 MetI-like domain CDO28_RS31385 IPR003439 ABC transporter-like CDO28_RS31385 IPR003593 AAA+ ATPase domain CDO28_RS31385 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS31385 IPR017871 ABC transporter, conserved site CDO28_RS31385 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31400 IPR000760 Inositol monophosphatase CDO28_RS31400 IPR020550 Inositol monophosphatase, conserved site CDO28_RS31400 IPR020583 Inositol monophosphatase, metal-binding site CDO28_RS31405 IPR000340 Dual specificity phosphatase, catalytic domain CDO28_RS31405 IPR029021 Protein-tyrosine phosphatase-like CDO28_RS31410 IPR000281 Helix-turn-helix protein RpiR CDO28_RS31410 IPR009057 Homeodomain-like CDO28_RS31410 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31420 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS31420 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS31420 IPR011006 CheY-like superfamily CDO28_RS31420 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31420 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS31425 IPR013702 FIST domain, N-terminal CDO28_RS31425 IPR019494 FIST C domain CDO28_RS31430 IPR000014 PAS domain CDO28_RS31430 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS31430 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS31430 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS31430 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS31430 IPR011006 CheY-like superfamily CDO28_RS31445 IPR013783 Immunoglobulin-like fold CDO28_RS31445 IPR014756 Immunoglobulin E-set CDO28_RS31445 IPR014880 Sulphur oxidation protein SoxZ CDO28_RS31445 IPR030831 CDO28_RS31445 CDO28_RS31445 IPR032711 CDO28_RS31445 CDO28_RS31450 IPR001279 Beta-lactamase-like CDO28_RS31450 IPR030829 CDO28_RS31450 CDO28_RS31460 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS31460 IPR011032 GroES (chaperonin 10)-like CDO28_RS31460 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS31460 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS31460 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase CDO28_RS31460 IPR016040 NAD(P)-binding domain CDO28_RS31465 IPR000801 Putative esterase CDO28_RS31465 IPR014186 S-formylglutathione hydrolase CDO28_RS31465 IPR029058 Alpha/Beta hydrolase fold CDO28_RS31470 IPR002327 Cytochrome c, class IA/ IB CDO28_RS31470 IPR009056 Cytochrome c-like domain CDO28_RS31475 IPR001479 Quinoprotein dehydrogenase, conserved site CDO28_RS31475 IPR002372 Pyrrolo-quinoline quinone repeat CDO28_RS31475 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CDO28_RS31475 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family CDO28_RS31475 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CDO28_RS31475 IPR027295 Quinonprotein alcohol dehydrogenase-like domain CDO28_RS31480 IPR009056 Cytochrome c-like domain CDO28_RS31480 IPR022411 C-type cytochrome, methanol metabolism-related CDO28_RS31485 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS31485 IPR022448 Quinoprotein dehydrogenase-associated CDO28_RS31490 IPR001763 Rhodanese-like domain CDO28_RS31490 IPR022376 PQQ-dependent catabolism-associated CXXCW motif CDO28_RS31495 IPR021698 Protein of unknown function DUF2380 CDO28_RS31500 IPR022478 ABC transporter, substrate-binding protein, PQQ-dependent alcohol dehydrogenase system CDO28_RS31500 IPR028081 Leucine-binding protein domain CDO28_RS31500 IPR028082 Periplasmic binding protein-like I CDO28_RS31505 IPR001680 WD40 repeat CDO28_RS31505 IPR011045 Nitrous oxide reductase, N-terminal CDO28_RS31505 IPR011964 YVTN beta-propeller repeat CDO28_RS31505 IPR015943 WD40/YVTN repeat-like-containing domain CDO28_RS31505 IPR019405 Lactonase, 7-bladed beta propeller CDO28_RS31505 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein CDO28_RS31515 IPR015168 SsuA/THI5-like CDO28_RS31520 IPR000515 MetI-like domain CDO28_RS31525 IPR003439 ABC transporter-like CDO28_RS31525 IPR003593 AAA+ ATPase domain CDO28_RS31525 IPR017871 ABC transporter, conserved site CDO28_RS31525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31530 IPR003439 ABC transporter-like CDO28_RS31530 IPR003593 AAA+ ATPase domain CDO28_RS31530 IPR022467 ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system CDO28_RS31530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31535 IPR000412 ABC-2 transporter CDO28_RS31535 IPR013525 ABC-2 type transporter CDO28_RS31535 IPR022403 Alcohol ABC transporter, permease protein CDO28_RS31540 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V CDO28_RS31540 IPR011057 Mss4-like CDO28_RS31540 IPR014185 Glutathione-dependent formaldehyde-activating enzyme CDO28_RS31545 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDO28_RS31545 IPR012336 Thioredoxin-like fold CDO28_RS31550 IPR000056 Ribulose-phosphate 3-epimerase-like CDO28_RS31550 IPR011060 Ribulose-phosphate binding barrel CDO28_RS31550 IPR013785 Aldolase-type TIM barrel CDO28_RS31550 IPR026019 Ribulose-phosphate 3-epimerase CDO28_RS31555 IPR000470 CbxX/CfqX, monofunctional CDO28_RS31555 IPR000641 CbxX/CfqX CDO28_RS31555 IPR003593 AAA+ ATPase domain CDO28_RS31555 IPR003959 ATPase, AAA-type, core CDO28_RS31555 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31560 IPR000894 Ribulose bisphosphate carboxylase small chain, domain CDO28_RS31565 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal CDO28_RS31565 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal CDO28_RS31565 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site CDO28_RS31565 IPR020888 Ribulose bisphosphate carboxylase, large subunit CDO28_RS31570 IPR000771 Ketose-bisphosphate aldolase, class-II CDO28_RS31570 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype CDO28_RS31570 IPR013785 Aldolase-type TIM barrel CDO28_RS31575 IPR005474 Transketolase, N-terminal CDO28_RS31575 IPR005475 Transketolase-like, pyrimidine-binding domain CDO28_RS31575 IPR005478 Transketolase, bacterial-like CDO28_RS31575 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CDO28_RS31575 IPR020826 Transketolase binding site CDO28_RS31575 IPR029061 Thiamin diphosphate-binding fold CDO28_RS31575 IPR033248 CDO28_RS31575 CDO28_RS31580 IPR006082 Phosphoribulokinase CDO28_RS31580 IPR006083 Phosphoribulokinase/uridine kinase CDO28_RS31580 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31585 IPR000146 Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase CDO28_RS31585 IPR020548 Fructose-1,6-bisphosphatase, active site CDO28_RS31585 IPR028343 Fructose-1,6-bisphosphatase CDO28_RS31585 IPR033391 CDO28_RS31585 CDO28_RS31590 IPR000847 Transcription regulator HTH, LysR CDO28_RS31590 IPR005119 LysR, substrate-binding CDO28_RS31590 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31595 IPR011725 Coenzyme PQQ biosynthesis protein A CDO28_RS31600 IPR001279 Beta-lactamase-like CDO28_RS31600 IPR011842 Coenzyme PQQ biosynthesis protein B CDO28_RS31605 IPR004305 Thiaminase-2/PQQC CDO28_RS31605 IPR011845 Coenzyme PQQ biosynthesis protein C CDO28_RS31605 IPR016084 Haem oxygenase-like, multi-helical CDO28_RS31610 IPR008792 Coenzyme PQQ synthesis D CDO28_RS31610 IPR022479 Coenzyme PQQ synthesis D, bacteria CDO28_RS31615 IPR006638 Elongator protein 3/MiaB/NifB CDO28_RS31615 IPR007197 Radical SAM CDO28_RS31615 IPR011843 Coenzyme PQQ biosynthesis protein E, bacteria CDO28_RS31615 IPR013785 Aldolase-type TIM barrel CDO28_RS31615 IPR017200 Radical SAM coenzyme PQQ biosynthesis protein E/heme D1 biosynthesis NirJ CDO28_RS31615 IPR023885 4Fe4S-binding SPASM domain CDO28_RS31620 IPR004370 4-oxalocrotonate tautomerase CDO28_RS31620 IPR014347 Tautomerase/MIF superfamily CDO28_RS31625 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS31625 IPR016040 NAD(P)-binding domain CDO28_RS31630 IPR000847 Transcription regulator HTH, LysR CDO28_RS31630 IPR005119 LysR, substrate-binding CDO28_RS31630 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31635 IPR002818 ThiJ/PfpI CDO28_RS31635 IPR029062 Class I glutamine amidotransferase-like CDO28_RS31640 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CDO28_RS31640 IPR003834 Cytochrome c assembly protein, transmembrane domain CDO28_RS31640 IPR008979 Galactose-binding domain-like CDO28_RS31640 IPR012336 Thioredoxin-like fold CDO28_RS31645 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS31645 IPR016040 NAD(P)-binding domain CDO28_RS31645 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS31650 IPR002818 ThiJ/PfpI CDO28_RS31650 IPR009057 Homeodomain-like CDO28_RS31650 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS31650 IPR029062 Class I glutamine amidotransferase-like CDO28_RS31655 IPR000073 Alpha/beta hydrolase fold-1 CDO28_RS31655 IPR000639 Epoxide hydrolase-like CDO28_RS31655 IPR029058 Alpha/Beta hydrolase fold CDO28_RS31660 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS31660 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS31665 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS31665 IPR003660 HAMP linker domain CDO28_RS31665 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS31665 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS31670 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS31670 IPR001867 Signal transduction response regulator, C-terminal CDO28_RS31670 IPR011006 CheY-like superfamily CDO28_RS31670 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31670 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS31675 IPR029058 Alpha/Beta hydrolase fold CDO28_RS31680 IPR000639 Epoxide hydrolase-like CDO28_RS31680 IPR010497 Epoxide hydrolase, N-terminal CDO28_RS31680 IPR016292 Epoxide hydrolase CDO28_RS31680 IPR029058 Alpha/Beta hydrolase fold CDO28_RS31685 IPR011051 RmlC-like cupin domain CDO28_RS31685 IPR013096 Cupin 2, conserved barrel CDO28_RS31685 IPR014710 RmlC-like jelly roll fold CDO28_RS31695 IPR012347 Ferritin-related CDO28_RS31695 IPR025419 Domain of unknown function DUF4142 CDO28_RS31700 IPR007055 BON domain CDO28_RS31700 IPR014004 Transport-associated and nodulation domain, bacteria CDO28_RS31715 IPR009937 Protein of unknown function DUF1469 CDO28_RS31720 IPR022062 Protein of unknown function DUF3618 CDO28_RS31725 IPR000843 Transcription regulator HTH, LacI CDO28_RS31725 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS31725 IPR028082 Periplasmic binding protein-like I CDO28_RS31735 IPR000515 MetI-like domain CDO28_RS31740 IPR000515 MetI-like domain CDO28_RS31745 IPR021345 Protein of unknown function DUF2961 CDO28_RS31750 IPR003439 ABC transporter-like CDO28_RS31750 IPR003593 AAA+ ATPase domain CDO28_RS31750 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS31750 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS31750 IPR013611 Transport-associated OB, type 2 CDO28_RS31750 IPR017871 ABC transporter, conserved site CDO28_RS31750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31765 IPR027554 Methyltransferase, Rta_06860 family CDO28_RS31765 IPR027555 tRNA (mo5U34)-methyltransferase-like CDO28_RS31765 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS31770 IPR016040 NAD(P)-binding domain CDO28_RS31790 IPR001296 Glycosyl transferase, family 1 CDO28_RS31790 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS31795 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS31795 IPR016040 NAD(P)-binding domain CDO28_RS31800 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS31800 IPR016040 NAD(P)-binding domain CDO28_RS31805 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS31805 IPR011032 GroES (chaperonin 10)-like CDO28_RS31805 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS31805 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS31805 IPR016040 NAD(P)-binding domain CDO28_RS31805 IPR020843 Polyketide synthase, enoylreductase CDO28_RS31810 IPR000683 Oxidoreductase, N-terminal CDO28_RS31810 IPR004104 Oxidoreductase, C-terminal CDO28_RS31810 IPR016040 NAD(P)-binding domain CDO28_RS31820 IPR002587 Myo-inositol-1-phosphate synthase CDO28_RS31820 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like CDO28_RS31820 IPR016040 NAD(P)-binding domain CDO28_RS31825 IPR013078 Histidine phosphatase superfamily, clade-1 CDO28_RS31825 IPR029033 Histidine phosphatase superfamily CDO28_RS31830 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS31830 IPR017853 Glycoside hydrolase, superfamily CDO28_RS31835 IPR007516 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal CDO28_RS31835 IPR007525 Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal CDO28_RS31840 IPR007345 Polysaccharide pyruvyl transferase CDO28_RS31850 IPR010406 Protein of unknown function DUF1003 CDO28_RS31855 IPR013538 Activator of Hsp90 ATPase homologue 1-like CDO28_RS31855 IPR023393 START-like domain CDO28_RS31860 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS31860 IPR029787 Nucleotide cyclase CDO28_RS31865 IPR000524 Transcription regulator HTH, GntR CDO28_RS31865 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS31865 IPR011711 GntR, C-terminal CDO28_RS31865 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31870 IPR002220 DapA-like CDO28_RS31870 IPR013785 Aldolase-type TIM barrel CDO28_RS31875 IPR010652 Protein of unknown function DUF1232 CDO28_RS31880 IPR003767 Malate/L-lactate dehydrogenase CDO28_RS31885 IPR015590 Aldehyde dehydrogenase domain CDO28_RS31885 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS31885 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS31885 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS31890 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS31895 IPR000515 MetI-like domain CDO28_RS31895 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS31900 IPR000515 MetI-like domain CDO28_RS31900 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS31905 IPR003439 ABC transporter-like CDO28_RS31905 IPR003593 AAA+ ATPase domain CDO28_RS31905 IPR017871 ABC transporter, conserved site CDO28_RS31905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31905 IPR030679 CDO28_RS31905 CDO28_RS31910 IPR006076 FAD dependent oxidoreductase CDO28_RS31910 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS31915 IPR008794 Proline racemase family CDO28_RS31920 IPR002840 Domain of unknown function DUF126 CDO28_RS31920 IPR007506 Domain of unknown function DUF521 CDO28_RS31920 IPR008279 PEP-utilising enzyme, mobile domain CDO28_RS31920 IPR012047 Uncharacterised conserved protein UCP036630 CDO28_RS31920 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CDO28_RS31920 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CDO28_RS31925 IPR008794 Proline racemase family CDO28_RS31930 IPR003718 OsmC/Ohr family CDO28_RS31930 IPR015946 K homology domain-like, alpha/beta CDO28_RS31935 IPR011701 Major facilitator superfamily CDO28_RS31935 IPR020846 Major facilitator superfamily domain CDO28_RS31955 IPR008567 3-keto-5-aminohexanoate cleavage enzyme CDO28_RS31955 IPR013785 Aldolase-type TIM barrel CDO28_RS31960 IPR000281 Helix-turn-helix protein RpiR CDO28_RS31960 IPR001347 Sugar isomerase (SIS) CDO28_RS31960 IPR009057 Homeodomain-like CDO28_RS31960 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS31965 IPR005814 Aminotransferase class-III CDO28_RS31965 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS31965 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS31965 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS31970 IPR003779 Carboxymuconolactone decarboxylase-like CDO28_RS31970 IPR010195 Uncharacterised peroxidase-related CDO28_RS31970 IPR029032 AhpD-like CDO28_RS31975 IPR023982 Conserved hypothetical protein CHP04029, CMD-like CDO28_RS31975 IPR029032 AhpD-like CDO28_RS31980 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS31985 IPR003439 ABC transporter-like CDO28_RS31985 IPR003593 AAA+ ATPase domain CDO28_RS31985 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CDO28_RS31985 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS31985 IPR013611 Transport-associated OB, type 2 CDO28_RS31985 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS31990 IPR000515 MetI-like domain CDO28_RS31995 IPR000515 MetI-like domain CDO28_RS32000 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CDO28_RS32005 IPR000847 Transcription regulator HTH, LysR CDO28_RS32005 IPR005119 LysR, substrate-binding CDO28_RS32005 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32010 IPR003421 Opine dehydrogenase CDO28_RS32010 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS32010 IPR013328 Dehydrogenase, multihelical CDO28_RS32010 IPR016040 NAD(P)-binding domain CDO28_RS32010 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDO28_RS32015 IPR002781 Transmembrane protein TauE like CDO28_RS32020 IPR006680 Amidohydrolase 1 CDO28_RS32020 IPR011059 Metal-dependent hydrolase, composite domain CDO28_RS32020 IPR032466 CDO28_RS32020 CDO28_RS32025 IPR006042 Xanthine/uracil permease CDO28_RS32025 IPR006043 Xanthine/uracil/vitamin C permease CDO28_RS32030 IPR000843 Transcription regulator HTH, LacI CDO28_RS32030 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS32030 IPR028082 Periplasmic binding protein-like I CDO28_RS32035 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS32035 IPR011853 TRAP transporter, 4TM/12TM fusion protein CDO28_RS32035 IPR021814 Protein of unknown function DUF3394 CDO28_RS32040 IPR011852 TRAP transporter solute receptor, TAXI family CDO28_RS32045 IPR018691 Protein of unknown function DUF2188 CDO28_RS32050 IPR000524 Transcription regulator HTH, GntR CDO28_RS32050 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS32050 IPR011711 GntR, C-terminal CDO28_RS32050 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32055 IPR004682 TRAP dicarboxylate transporter CDO28_RS32055 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS32060 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS32065 IPR004681 TRAP transporter permease protein CDO28_RS32065 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS32070 IPR002220 DapA-like CDO28_RS32070 IPR013785 Aldolase-type TIM barrel CDO28_RS32075 IPR002220 DapA-like CDO28_RS32075 IPR005264 N-acetylneuraminate lyase CDO28_RS32075 IPR013785 Aldolase-type TIM barrel CDO28_RS32075 IPR020625 Dihydrodipicolinate synthetase, active site CDO28_RS32080 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS32080 IPR011990 Tetratricopeptide-like helical domain CDO28_RS32080 IPR029787 Nucleotide cyclase CDO28_RS32085 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CDO28_RS32085 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS32085 IPR012938 Glucose/Sorbosone dehydrogenase CDO28_RS32100 IPR004007 DhaL domain CDO28_RS32100 IPR012737 Dihydroxyacetone kinase, subunit L CDO28_RS32105 IPR004006 Dak kinase CDO28_RS32105 IPR007324 Sugar-binding domain, putative CDO28_RS32105 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32105 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS32105 IPR013324 RNA polymerase sigma factor, region 3/4 CDO28_RS32110 IPR004007 DhaL domain CDO28_RS32110 IPR012737 Dihydroxyacetone kinase, subunit L CDO28_RS32115 IPR004006 Dak kinase CDO28_RS32120 IPR001851 ABC transporter, permease CDO28_RS32125 IPR025997 Periplasmic binding protein domain CDO28_RS32125 IPR028082 Periplasmic binding protein-like I CDO28_RS32130 IPR003439 ABC transporter-like CDO28_RS32130 IPR003593 AAA+ ATPase domain CDO28_RS32130 IPR017871 ABC transporter, conserved site CDO28_RS32130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS32135 IPR001851 ABC transporter, permease CDO28_RS32140 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CDO28_RS32140 IPR022460 Conserved hyptotheical protein CHP03862, flavoprotein, PP4765 CDO28_RS32140 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS32150 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS32155 IPR004681 TRAP transporter permease protein CDO28_RS32155 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS32160 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS32165 IPR000524 Transcription regulator HTH, GntR CDO28_RS32165 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS32165 IPR011711 GntR, C-terminal CDO28_RS32165 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32170 IPR000843 Transcription regulator HTH, LacI CDO28_RS32170 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS32170 IPR028082 Periplasmic binding protein-like I CDO28_RS32175 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS32180 IPR000515 MetI-like domain CDO28_RS32185 IPR000515 MetI-like domain CDO28_RS32190 IPR003439 ABC transporter-like CDO28_RS32190 IPR003593 AAA+ ATPase domain CDO28_RS32190 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS32190 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS32190 IPR013611 Transport-associated OB, type 2 CDO28_RS32190 IPR017871 ABC transporter, conserved site CDO28_RS32190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS32195 IPR009381 Trehalose catabolism protein, ThuA, prokaryote CDO28_RS32195 IPR029010 ThuA-like domain CDO28_RS32195 IPR029062 Class I glutamine amidotransferase-like CDO28_RS32200 IPR000683 Oxidoreductase, N-terminal CDO28_RS32200 IPR004104 Oxidoreductase, C-terminal CDO28_RS32200 IPR016040 NAD(P)-binding domain CDO28_RS32205 IPR005530 SPW repeat CDO28_RS32215 IPR000917 Sulfatase CDO28_RS32215 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CDO28_RS32215 IPR017850 Alkaline-phosphatase-like, core domain CDO28_RS32235 IPR021556 Protein of unknown function DUF2950 CDO28_RS32245 IPR005532 Formylglycine-generating sulphatase enzyme domain CDO28_RS32245 IPR016187 C-type lectin fold CDO28_RS32250 IPR010297 Protein of unknown function DUF900, hydrolase-like CDO28_RS32250 IPR014586 Uncharacterised conserved protein UCP033909 CDO28_RS32250 IPR029058 Alpha/Beta hydrolase fold CDO28_RS32260 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS32260 IPR009057 Homeodomain-like CDO28_RS32260 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS32265 IPR011701 Major facilitator superfamily CDO28_RS32265 IPR020846 Major facilitator superfamily domain CDO28_RS32290 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS32290 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS32290 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CDO28_RS32295 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS32295 IPR002888 [2Fe-2S]-binding CDO28_RS32295 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS32295 IPR012675 Beta-grasp domain CDO28_RS32300 IPR009057 Homeodomain-like CDO28_RS32300 IPR009594 Transcription regulator HTH, AraC, N-terminal CDO28_RS32300 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS32305 IPR001036 Acriflavin resistance protein CDO28_RS32305 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CDO28_RS32310 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS32310 IPR032317 CDO28_RS32310 CDO28_RS32315 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS32315 IPR009057 Homeodomain-like CDO28_RS32315 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS32315 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS32320 IPR016040 NAD(P)-binding domain CDO28_RS32320 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CDO28_RS32320 IPR031663 CDO28_RS32320 CDO28_RS32325 IPR025997 Periplasmic binding protein domain CDO28_RS32325 IPR028082 Periplasmic binding protein-like I CDO28_RS32335 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein CDO28_RS32340 IPR003439 ABC transporter-like CDO28_RS32340 IPR003593 AAA+ ATPase domain CDO28_RS32340 IPR017871 ABC transporter, conserved site CDO28_RS32340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS32345 IPR001851 ABC transporter, permease CDO28_RS32350 IPR000683 Oxidoreductase, N-terminal CDO28_RS32350 IPR004104 Oxidoreductase, C-terminal CDO28_RS32350 IPR016040 NAD(P)-binding domain CDO28_RS32360 IPR021796 Protein of unknown function DUF3365 CDO28_RS32365 IPR000014 PAS domain CDO28_RS32365 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS32365 IPR003594 Histidine kinase-like ATPase, C-terminal domain CDO28_RS32365 IPR003660 HAMP linker domain CDO28_RS32365 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS32365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CDO28_RS32365 IPR011006 CheY-like superfamily CDO28_RS32370 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS32370 IPR011006 CheY-like superfamily CDO28_RS32375 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS32375 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS32375 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CDO28_RS32375 IPR011006 CheY-like superfamily CDO28_RS32375 IPR029787 Nucleotide cyclase CDO28_RS32385 IPR029045 ClpP/crotonase-like domain CDO28_RS32390 IPR013099 Two pore domain potassium channel domain CDO28_RS32390 IPR028325 Voltage-gated potassium channel CDO28_RS32395 IPR000760 Inositol monophosphatase CDO28_RS32395 IPR020583 Inositol monophosphatase, metal-binding site CDO28_RS32400 IPR003439 ABC transporter-like CDO28_RS32400 IPR003593 AAA+ ATPase domain CDO28_RS32400 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS32400 IPR013611 Transport-associated OB, type 2 CDO28_RS32400 IPR017871 ABC transporter, conserved site CDO28_RS32400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS32405 IPR000515 MetI-like domain CDO28_RS32410 IPR026045 Ferric binding protein CDO28_RS32415 IPR000843 Transcription regulator HTH, LacI CDO28_RS32415 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS32415 IPR028082 Periplasmic binding protein-like I CDO28_RS32420 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS32420 IPR009057 Homeodomain-like CDO28_RS32420 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS32420 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CDO28_RS32425 IPR006143 RND efflux pump, membrane fusion protein CDO28_RS32425 IPR032317 CDO28_RS32425 CDO28_RS32430 IPR003838 Permease FtsX-like CDO28_RS32430 IPR025857 MacB-like periplasmic core domain CDO28_RS32435 IPR003439 ABC transporter-like CDO28_RS32435 IPR003593 AAA+ ATPase domain CDO28_RS32435 IPR017871 ABC transporter, conserved site CDO28_RS32435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS32440 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CDO28_RS32440 IPR004785 Ribose 5-phosphate isomerase B CDO28_RS32445 IPR004681 TRAP transporter permease protein CDO28_RS32445 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS32450 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS32455 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS32460 IPR000524 Transcription regulator HTH, GntR CDO28_RS32460 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS32460 IPR011711 GntR, C-terminal CDO28_RS32460 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32465 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS32465 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS32470 IPR006175 YjgF/Yer057p/UK114 family CDO28_RS32470 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CDO28_RS32475 IPR015590 Aldehyde dehydrogenase domain CDO28_RS32475 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS32475 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS32475 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS32480 IPR005814 Aminotransferase class-III CDO28_RS32480 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS32480 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS32480 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS32485 IPR003439 ABC transporter-like CDO28_RS32485 IPR003593 AAA+ ATPase domain CDO28_RS32485 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS32485 IPR013611 Transport-associated OB, type 2 CDO28_RS32485 IPR017871 ABC transporter, conserved site CDO28_RS32485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS32490 IPR000515 MetI-like domain CDO28_RS32495 IPR000515 MetI-like domain CDO28_RS32505 IPR008257 Renal dipeptidase family CDO28_RS32505 IPR032466 CDO28_RS32505 CDO28_RS32520 IPR005471 Transcription regulator IclR, N-terminal CDO28_RS32520 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32520 IPR014757 Transcription regulator IclR, C-terminal CDO28_RS32520 IPR029016 GAF domain-like CDO28_RS32525 IPR011032 GroES (chaperonin 10)-like CDO28_RS32525 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS32525 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS32525 IPR016040 NAD(P)-binding domain CDO28_RS32525 IPR020843 Polyketide synthase, enoylreductase CDO28_RS32530 IPR000160 GGDEF domain CDO28_RS32530 IPR029016 GAF domain-like CDO28_RS32530 IPR029787 Nucleotide cyclase CDO28_RS32540 IPR032317 CDO28_RS32540 CDO28_RS32545 IPR003919 Cellulose synthase, subunit A CDO28_RS32545 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS32550 IPR000524 Transcription regulator HTH, GntR CDO28_RS32550 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS32550 IPR011711 GntR, C-terminal CDO28_RS32550 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32555 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal CDO28_RS32555 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal CDO28_RS32555 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site CDO28_RS32560 IPR010737 Protein of unknown function, DUF1537 CDO28_RS32560 IPR031475 CDO28_RS32560 CDO28_RS32565 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS32565 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS32570 IPR002346 Molybdopterin dehydrogenase, FAD-binding CDO28_RS32570 IPR005107 CO dehydrogenase flavoprotein, C-terminal CDO28_RS32570 IPR016166 FAD-binding, type 2 CDO28_RS32570 IPR016167 FAD-binding, type 2, subdomain 1 CDO28_RS32570 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CDO28_RS32575 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS32575 IPR002888 [2Fe-2S]-binding CDO28_RS32575 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS32575 IPR012675 Beta-grasp domain CDO28_RS32580 IPR029052 Metallo-dependent phosphatase-like CDO28_RS32585 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CDO28_RS32600 IPR009056 Cytochrome c-like domain CDO28_RS32600 IPR014353 Membrane-bound alcohol dehydrogenase, cytochrome c subunit CDO28_RS32605 IPR001041 2Fe-2S ferredoxin-type domain CDO28_RS32605 IPR002888 [2Fe-2S]-binding CDO28_RS32605 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CDO28_RS32605 IPR012675 Beta-grasp domain CDO28_RS32610 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CDO28_RS32610 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CDO28_RS32610 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CDO28_RS32620 IPR018729 Protein of unknown function DUF2269, transmembrane CDO28_RS32625 IPR016040 NAD(P)-binding domain CDO28_RS32625 IPR025695 DoxX family CDO28_RS32640 IPR000515 MetI-like domain CDO28_RS32645 IPR000515 MetI-like domain CDO28_RS32650 IPR003439 ABC transporter-like CDO28_RS32650 IPR003593 AAA+ ATPase domain CDO28_RS32650 IPR008995 Molybdate/tungstate binding, C-terminal CDO28_RS32650 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS32650 IPR013611 Transport-associated OB, type 2 CDO28_RS32650 IPR017871 ABC transporter, conserved site CDO28_RS32650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS32655 IPR004045 Glutathione S-transferase, N-terminal CDO28_RS32655 IPR004046 Glutathione S-transferase, C-terminal CDO28_RS32655 IPR010987 Glutathione S-transferase, C-terminal-like CDO28_RS32655 IPR012336 Thioredoxin-like fold CDO28_RS32660 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CDO28_RS32660 IPR011032 GroES (chaperonin 10)-like CDO28_RS32660 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS32660 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS32660 IPR016040 NAD(P)-binding domain CDO28_RS32660 IPR020843 Polyketide synthase, enoylreductase CDO28_RS32665 IPR005814 Aminotransferase class-III CDO28_RS32665 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS32665 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS32665 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS32670 IPR015590 Aldehyde dehydrogenase domain CDO28_RS32670 IPR016160 Aldehyde dehydrogenase, cysteine active site CDO28_RS32670 IPR016161 Aldehyde/histidinol dehydrogenase CDO28_RS32670 IPR016162 Aldehyde dehydrogenase, N-terminal CDO28_RS32670 IPR016163 Aldehyde dehydrogenase, C-terminal CDO28_RS32675 IPR000485 AsnC-type HTH domain CDO28_RS32675 IPR011008 Dimeric alpha-beta barrel CDO28_RS32675 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32675 IPR019887 Transcription regulator AsnC-type, C-terminal CDO28_RS32675 IPR019888 Transcription regulator AsnC-type CDO28_RS32680 IPR000524 Transcription regulator HTH, GntR CDO28_RS32680 IPR004839 Aminotransferase, class I/classII CDO28_RS32680 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32680 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS32680 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS32685 IPR003439 ABC transporter-like CDO28_RS32685 IPR003593 AAA+ ATPase domain CDO28_RS32685 IPR014343 Ectoine/hydroxyectoine ABC transporter, ATP-binding protein CDO28_RS32685 IPR017871 ABC transporter, conserved site CDO28_RS32685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS32685 IPR030679 CDO28_RS32685 CDO28_RS32690 IPR001638 Extracellular solute-binding protein, family 3 CDO28_RS32690 IPR014337 Ectoine/hydroxyEctoine ABC transporter solute-binding protein EhuB CDO28_RS32695 IPR000515 MetI-like domain CDO28_RS32695 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS32695 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC CDO28_RS32700 IPR000515 MetI-like domain CDO28_RS32700 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CDO28_RS32700 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD CDO28_RS32705 IPR014332 Ectoine utilization protein EutA CDO28_RS32705 IPR026286 Maleate isomerase/Arylmalonate decarboxylase CDO28_RS32710 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CDO28_RS32710 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CDO28_RS32710 IPR014333 Ectoine utilization protein EutB CDO28_RS32715 IPR003462 Ornithine cyclodeaminase/mu-crystallin CDO28_RS32715 IPR014334 Ectoine utilization protein EutC CDO28_RS32715 IPR016040 NAD(P)-binding domain CDO28_RS32715 IPR023401 Ornithine cyclodeaminase, N-terminal CDO28_RS32720 IPR000587 Creatinase, N-terminal CDO28_RS32720 IPR000994 Peptidase M24, structural domain CDO28_RS32720 IPR014335 Ectoine utilization protein EutD CDO28_RS32720 IPR028980 Creatinase/Aminopeptidase P, N-terminal CDO28_RS32720 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CDO28_RS32725 IPR007036 Succinylglutamate desuccinylase/aspartoacylase CDO28_RS32725 IPR014336 N-alpha-acetyl diaminobutyrate deacetylase DoeB CDO28_RS32730 IPR011701 Major facilitator superfamily CDO28_RS32730 IPR020846 Major facilitator superfamily domain CDO28_RS32735 IPR000524 Transcription regulator HTH, GntR CDO28_RS32735 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS32735 IPR011711 GntR, C-terminal CDO28_RS32735 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32740 IPR004682 TRAP dicarboxylate transporter CDO28_RS32740 IPR018389 Bacterial extracellular solute-binding protein, family 7 CDO28_RS32745 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CDO28_RS32750 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CDO28_RS32755 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CDO28_RS32755 IPR011032 GroES (chaperonin 10)-like CDO28_RS32755 IPR013149 Alcohol dehydrogenase, C-terminal CDO28_RS32755 IPR013154 Alcohol dehydrogenase GroES-like CDO28_RS32755 IPR016040 NAD(P)-binding domain CDO28_RS32760 IPR004628 Mannonate dehydratase CDO28_RS32760 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS32765 IPR000160 GGDEF domain CDO28_RS32765 IPR001633 EAL domain CDO28_RS32765 IPR029787 Nucleotide cyclase CDO28_RS32775 IPR004033 UbiE/COQ5 methyltransferase CDO28_RS32775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS32780 IPR001932 Protein phosphatase 2C (PP2C)-like domain CDO28_RS32780 IPR003660 HAMP linker domain CDO28_RS32790 IPR002645 STAS domain CDO28_RS32795 IPR005511 Senescence marker protein-30 (SMP-30) CDO28_RS32795 IPR011042 Six-bladed beta-propeller, TolB-like CDO28_RS32795 IPR013658 SMP-30/Gluconolactonase/LRE-like region CDO28_RS32800 IPR009642 Protein of unknown function DUF1236 CDO28_RS32805 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS32805 IPR009057 Homeodomain-like CDO28_RS32805 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS32805 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS32810 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS32810 IPR016040 NAD(P)-binding domain CDO28_RS32810 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS32815 IPR003313 AraC-type arabinose-binding/dimerisation domain CDO28_RS32815 IPR009057 Homeodomain-like CDO28_RS32815 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS32820 IPR016040 NAD(P)-binding domain CDO28_RS32825 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS32825 IPR005886 UDP-glucose 4-epimerase GalE CDO28_RS32825 IPR016040 NAD(P)-binding domain CDO28_RS32830 IPR025993 Ceramide glucosyltransferase CDO28_RS32830 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS32835 IPR009337 Protein of unknown function DUF995 CDO28_RS32840 IPR013781 Glycoside hydrolase, catalytic domain CDO28_RS32840 IPR017853 Glycoside hydrolase, superfamily CDO28_RS32840 IPR022790 Endoglucanase H/Glycosyl hydrolase family 26 CDO28_RS32845 IPR009337 Protein of unknown function DUF995 CDO28_RS32855 IPR000600 ROK CDO28_RS32860 IPR008007 Peptidase M42 CDO28_RS32860 IPR017537 Peptidase M42, hydrolase CDO28_RS32860 IPR023367 Peptidase M42, domain 2 CDO28_RS32865 IPR025629 Protein of unknown function DUF4287 CDO28_RS32870 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase CDO28_RS32870 IPR028973 3-demethylubiquinone-9 3-methyltransferase CDO28_RS32870 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS32875 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS32875 IPR030678 CDO28_RS32875 CDO28_RS32880 IPR000515 MetI-like domain CDO28_RS32885 IPR000515 MetI-like domain CDO28_RS32885 IPR003439 ABC transporter-like CDO28_RS32885 IPR003593 AAA+ ATPase domain CDO28_RS32885 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS32885 IPR017871 ABC transporter, conserved site CDO28_RS32885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS32890 IPR003439 ABC transporter-like CDO28_RS32890 IPR003593 AAA+ ATPase domain CDO28_RS32890 IPR017871 ABC transporter, conserved site CDO28_RS32890 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS32895 IPR000524 Transcription regulator HTH, GntR CDO28_RS32895 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS32895 IPR011711 GntR, C-terminal CDO28_RS32895 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32900 IPR001962 Asparagine synthase CDO28_RS32900 IPR006426 Asparagine synthase, glutamine-hydrolyzing CDO28_RS32900 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS32900 IPR017535 Asparagine synthase family amidotransferase CDO28_RS32900 IPR017932 Glutamine amidotransferase type 2 domain CDO28_RS32900 IPR029055 Nucleophile aminohydrolases, N-terminal CDO28_RS32905 IPR000182 GNAT domain CDO28_RS32905 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS32905 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS32905 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS32905 IPR017534 GNAT-acetyltransferase CDO28_RS32910 IPR000843 Transcription regulator HTH, LacI CDO28_RS32910 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS32910 IPR025997 Periplasmic binding protein domain CDO28_RS32910 IPR028082 Periplasmic binding protein-like I CDO28_RS32915 IPR025997 Periplasmic binding protein domain CDO28_RS32915 IPR028082 Periplasmic binding protein-like I CDO28_RS32920 IPR003439 ABC transporter-like CDO28_RS32920 IPR003593 AAA+ ATPase domain CDO28_RS32920 IPR017871 ABC transporter, conserved site CDO28_RS32920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS32925 IPR001851 ABC transporter, permease CDO28_RS32930 IPR001851 ABC transporter, permease CDO28_RS32935 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS32940 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS32945 IPR001303 Class II aldolase/adducin N-terminal CDO28_RS32950 IPR010296 Protein of unknown function DUF899, thioredoxin-like CDO28_RS32950 IPR012336 Thioredoxin-like fold CDO28_RS32955 IPR000868 Isochorismatase-like CDO28_RS32960 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS32960 IPR016040 NAD(P)-binding domain CDO28_RS32965 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS32965 IPR016040 NAD(P)-binding domain CDO28_RS32970 IPR000847 Transcription regulator HTH, LysR CDO28_RS32970 IPR005119 LysR, substrate-binding CDO28_RS32970 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS32975 IPR009506 Protein of unknown function DUF1127 CDO28_RS32980 IPR011990 Tetratricopeptide-like helical domain CDO28_RS32980 IPR019734 Tetratricopeptide repeat CDO28_RS32985 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CDO28_RS32985 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CDO28_RS32985 IPR012132 Glucose-methanol-choline oxidoreductase CDO28_RS32985 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS32990 IPR000577 CDO28_RS32990 CDO28_RS32990 IPR018483 Carbohydrate kinase, FGGY, conserved site CDO28_RS32990 IPR018484 Carbohydrate kinase, FGGY, N-terminal CDO28_RS32990 IPR018485 Carbohydrate kinase, FGGY, C-terminal CDO28_RS32995 IPR002915 DeoC/FbaB/ lacD aldolase CDO28_RS32995 IPR013785 Aldolase-type TIM barrel CDO28_RS33000 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CDO28_RS33000 IPR006076 FAD dependent oxidoreductase CDO28_RS33000 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS33000 IPR031656 CDO28_RS33000 CDO28_RS33005 IPR020471 Aldo/keto reductase subgroup CDO28_RS33005 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS33010 IPR007324 Sugar-binding domain, putative CDO28_RS33010 IPR009057 Homeodomain-like CDO28_RS33010 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS33010 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CDO28_RS33015 IPR001851 ABC transporter, permease CDO28_RS33020 IPR003439 ABC transporter-like CDO28_RS33020 IPR003593 AAA+ ATPase domain CDO28_RS33020 IPR017871 ABC transporter, conserved site CDO28_RS33020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS33025 IPR025997 Periplasmic binding protein domain CDO28_RS33025 IPR028082 Periplasmic binding protein-like I CDO28_RS33030 IPR002575 Aminoglycoside phosphotransferase CDO28_RS33030 IPR011009 Protein kinase-like domain CDO28_RS33035 IPR001851 ABC transporter, permease CDO28_RS33040 IPR003439 ABC transporter-like CDO28_RS33040 IPR003593 AAA+ ATPase domain CDO28_RS33040 IPR017871 ABC transporter, conserved site CDO28_RS33040 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS33045 IPR001761 Periplasmic binding protein/LacI sugar binding domain CDO28_RS33045 IPR026266 L-arabinose-binding periplasmic protein CDO28_RS33045 IPR028082 Periplasmic binding protein-like I CDO28_RS33050 IPR000524 Transcription regulator HTH, GntR CDO28_RS33050 IPR008920 Transcription regulator FadR/GntR, C-terminal CDO28_RS33050 IPR011711 GntR, C-terminal CDO28_RS33050 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS33055 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CDO28_RS33055 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CDO28_RS33055 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site CDO28_RS33055 IPR029017 Enolase N-terminal domain-like CDO28_RS33055 IPR029065 Enolase C-terminal domain-like CDO28_RS33060 IPR002347 Glucose/ribitol dehydrogenase CDO28_RS33060 IPR016040 NAD(P)-binding domain CDO28_RS33060 IPR020904 Short-chain dehydrogenase/reductase, conserved site CDO28_RS33070 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CDO28_RS33070 IPR011247 Chemotaxis protein-glutamate methylesterase CDO28_RS33075 IPR000014 PAS domain CDO28_RS33075 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CDO28_RS33075 IPR000780 MCP methyltransferase, CheR-type CDO28_RS33075 IPR001610 PAC motif CDO28_RS33075 IPR011102 Signal transduction histidine kinase, HWE region CDO28_RS33075 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal CDO28_RS33075 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CDO28_RS33075 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS33075 IPR032675 CDO28_RS33075 CDO28_RS33080 IPR011006 CheY-like superfamily CDO28_RS33095 IPR011033 PRC-barrel-like CDO28_RS33095 IPR027275 PRC-barrel domain CDO28_RS33105 IPR011008 Dimeric alpha-beta barrel CDO28_RS33110 IPR032808 CDO28_RS33110 CDO28_RS33115 IPR018640 Protein of unknown function DUF2063 CDO28_RS33120 IPR007801 Uncharacterised protein family UPF0276 CDO28_RS33120 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS33125 IPR018740 Protein of unknown function DUF2282, integral membrane CDO28_RS33135 IPR009495 Protein of unknown function DUF1109 CDO28_RS33145 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS33145 IPR019432 Siderophore biosynthesis protein, conserved domain CDO28_RS33150 IPR013022 Xylose isomerase-like, TIM barrel domain CDO28_RS33155 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDO28_RS33155 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CDO28_RS33155 IPR016040 NAD(P)-binding domain CDO28_RS33160 IPR016624 Uncharacterised conserved protein UCP014753 CDO28_RS33165 IPR000843 Transcription regulator HTH, LacI CDO28_RS33165 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS33165 IPR028082 Periplasmic binding protein-like I CDO28_RS33170 IPR006059 Bacterial extracellular solute-binding, family 1 CDO28_RS33180 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase CDO28_RS33180 IPR011990 Tetratricopeptide-like helical domain CDO28_RS33180 IPR019734 Tetratricopeptide repeat CDO28_RS33180 IPR029787 Nucleotide cyclase CDO28_RS33195 IPR010385 Protein of unknown function DUF982 CDO28_RS33235 IPR010385 Protein of unknown function DUF982 CDO28_RS33240 IPR010385 Protein of unknown function DUF982 CDO28_RS33250 IPR002925 Dienelactone hydrolase CDO28_RS33250 IPR029058 Alpha/Beta hydrolase fold CDO28_RS33275 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family CDO28_RS33290 IPR007401 Protein of unknown function DUF454 CDO28_RS33305 IPR006121 Heavy metal-associated domain, HMA CDO28_RS33305 IPR017969 Heavy-metal-associated, conserved site CDO28_RS33310 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS33315 IPR009367 Mitochondrial fission protein ELM1-like CDO28_RS33320 IPR008166 Domain of unknown function DUF23 CDO28_RS33320 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS33345 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS33360 IPR000644 CBS domain CDO28_RS33360 IPR001347 Sugar isomerase (SIS) CDO28_RS33360 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CDO28_RS33365 IPR002656 Acyltransferase 3 CDO28_RS33375 IPR007345 Polysaccharide pyruvyl transferase CDO28_RS33380 IPR003439 ABC transporter-like CDO28_RS33380 IPR003593 AAA+ ATPase domain CDO28_RS33380 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS33380 IPR017871 ABC transporter, conserved site CDO28_RS33380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS33385 IPR005331 Sulfotransferase CDO28_RS33385 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS33395 IPR003997 RTX secretion protein D, Gram-negative bacteria CDO28_RS33395 IPR010129 Type I secretion membrane fusion protein, HlyD CDO28_RS33400 IPR003439 ABC transporter-like CDO28_RS33400 IPR003593 AAA+ ATPase domain CDO28_RS33400 IPR010128 ATPase, type I secretion system, PrtD CDO28_RS33400 IPR011527 ABC transporter type 1, transmembrane domain CDO28_RS33400 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS33415 IPR001173 Glycosyltransferase 2-like CDO28_RS33415 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS33420 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CDO28_RS33430 IPR000873 AMP-dependent synthetase/ligase CDO28_RS33430 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated CDO28_RS33430 IPR020845 AMP-binding, conserved site CDO28_RS33430 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS33435 IPR000183 Ornithine/DAP/Arg decarboxylase CDO28_RS33435 IPR002433 Ornithine decarboxylase CDO28_RS33435 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CDO28_RS33435 IPR017530 Pyridoxal-dependent decarboxylase, exosortase system type 1 associated CDO28_RS33435 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CDO28_RS33435 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CDO28_RS33435 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CDO28_RS33435 IPR029066 PLP-binding barrel CDO28_RS33440 IPR009081 Acyl carrier protein-like CDO28_RS33445 IPR001173 Glycosyltransferase 2-like CDO28_RS33445 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS33450 IPR002509 Polysaccharide deacetylase CDO28_RS33450 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CDO28_RS33455 IPR025789 Histone H3-K79 methyltransferase CDO28_RS33455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS33460 IPR005123 Oxoglutarate/iron-dependent dioxygenase CDO28_RS33475 IPR001173 Glycosyltransferase 2-like CDO28_RS33475 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS33480 IPR004379 UDP-galactopyranose mutase CDO28_RS33480 IPR015899 UDP-galactopyranose mutase, C-terminal CDO28_RS33480 IPR016040 NAD(P)-binding domain CDO28_RS33495 IPR007016 O-antigen ligase-related CDO28_RS33510 IPR011050 Pectin lyase fold/virulence factor CDO28_RS33530 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDO28_RS33530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS33535 IPR003856 Lipopolysaccharide biosynthesis CDO28_RS33545 IPR001173 Glycosyltransferase 2-like CDO28_RS33545 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS33555 IPR003362 Bacterial sugar transferase CDO28_RS33560 IPR032812 CDO28_RS33560 CDO28_RS33570 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS33570 IPR011004 Trimeric LpxA-like CDO28_RS33570 IPR018357 Hexapeptide transferase, conserved site CDO28_RS33575 IPR000683 Oxidoreductase, N-terminal CDO28_RS33575 IPR016040 NAD(P)-binding domain CDO28_RS33580 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDO28_RS33580 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS33580 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS33580 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS33585 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS33585 IPR011004 Trimeric LpxA-like CDO28_RS33585 IPR018357 Hexapeptide transferase, conserved site CDO28_RS33590 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CDO28_RS33590 IPR016040 NAD(P)-binding domain CDO28_RS33595 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CDO28_RS33595 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS33595 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CDO28_RS33595 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS33605 IPR005913 dTDP-4-dehydrorhamnose reductase CDO28_RS33605 IPR016040 NAD(P)-binding domain CDO28_RS33605 IPR029903 CDO28_RS33605 CDO28_RS33610 IPR005888 dTDP-glucose 4,6-dehydratase CDO28_RS33610 IPR016040 NAD(P)-binding domain CDO28_RS33615 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related CDO28_RS33615 IPR011051 RmlC-like cupin domain CDO28_RS33615 IPR014710 RmlC-like jelly roll fold CDO28_RS33620 IPR005835 Nucleotidyl transferase CDO28_RS33620 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form CDO28_RS33620 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS33625 IPR003715 Polysaccharide export protein CDO28_RS33625 IPR019554 Soluble ligand binding domain CDO28_RS33630 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS33630 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS33630 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS33635 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS33635 IPR011006 CheY-like superfamily CDO28_RS33635 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS33635 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS33640 IPR000792 Transcription regulator LuxR, C-terminal CDO28_RS33640 IPR011006 CheY-like superfamily CDO28_RS33640 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS33640 IPR016032 Signal transduction response regulator, C-terminal effector CDO28_RS33645 IPR028992 Hedgehog/Intein (Hint) domain CDO28_RS33660 IPR007844 AsmA CDO28_RS33660 IPR032712 CDO28_RS33660 CDO28_RS33665 IPR000843 Transcription regulator HTH, LacI CDO28_RS33665 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS33665 IPR025997 Periplasmic binding protein domain CDO28_RS33665 IPR028082 Periplasmic binding protein-like I CDO28_RS33670 IPR005804 Fatty acid desaturase, type 1 CDO28_RS33675 IPR012747 MocE Rieske [2Fe-2S] CDO28_RS33675 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CDO28_RS33680 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDO28_RS33680 IPR016156 FAD/NAD-linked reductase, dimerisation domain CDO28_RS33680 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CDO28_RS33680 IPR028202 Reductase, C-terminal CDO28_RS33685 IPR003700 Ketopantoate hydroxymethyltransferase CDO28_RS33685 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CDO28_RS33690 IPR000412 ABC-2 transporter CDO28_RS33690 IPR013525 ABC-2 type transporter CDO28_RS33695 IPR007833 Capsule polysaccharide biosynthesis CDO28_RS33700 IPR007833 Capsule polysaccharide biosynthesis CDO28_RS33700 IPR011990 Tetratricopeptide-like helical domain CDO28_RS33700 IPR019290 Glycosyltransferase 2-like, prokaryotic type CDO28_RS33700 IPR029044 Nucleotide-diphospho-sugar transferases CDO28_RS33705 IPR001451 Bacterial transferase hexapeptide repeat CDO28_RS33705 IPR011004 Trimeric LpxA-like CDO28_RS33705 IPR018357 Hexapeptide transferase, conserved site CDO28_RS33715 IPR008565 Protein of unknown function DUF847 CDO28_RS33715 IPR023346 Lysozyme-like domain CDO28_RS33720 IPR008565 Protein of unknown function DUF847 CDO28_RS33720 IPR023346 Lysozyme-like domain CDO28_RS33740 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS33740 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS33740 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS33745 IPR000644 CBS domain CDO28_RS33745 IPR001347 Sugar isomerase (SIS) CDO28_RS33745 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type CDO28_RS33755 IPR003439 ABC transporter-like CDO28_RS33755 IPR003593 AAA+ ATPase domain CDO28_RS33755 IPR017871 ABC transporter, conserved site CDO28_RS33755 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS33760 IPR000412 ABC-2 transporter CDO28_RS33760 IPR013525 ABC-2 type transporter CDO28_RS33765 IPR007833 Capsule polysaccharide biosynthesis CDO28_RS33770 IPR002934 Nucleotidyl transferase domain CDO28_RS33770 IPR007842 HEPN CDO28_RS33785 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS33785 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS33785 IPR018511 Hemolysin-type calcium-binding conserved site CDO28_RS33790 IPR018738 Protein of unknown function DUF2280 CDO28_RS33795 IPR010033 HAD-superfamily phosphatase, subfamily IIIC CDO28_RS33795 IPR010037 FkbH domain CDO28_RS33795 IPR016181 Acyl-CoA N-acyltransferase CDO28_RS33795 IPR023214 HAD-like domain CDO28_RS33800 IPR009081 Acyl carrier protein-like CDO28_RS33810 IPR004299 Membrane bound O-acyl transferase, MBOAT CDO28_RS33810 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB CDO28_RS33810 IPR028362 Alginate O-acetyltransferase AlgI CDO28_RS33815 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS33825 IPR001303 Class II aldolase/adducin N-terminal CDO28_RS33830 IPR025997 Periplasmic binding protein domain CDO28_RS33830 IPR028082 Periplasmic binding protein-like I CDO28_RS33835 IPR001851 ABC transporter, permease CDO28_RS33840 IPR001851 ABC transporter, permease CDO28_RS33845 IPR003439 ABC transporter-like CDO28_RS33845 IPR003593 AAA+ ATPase domain CDO28_RS33845 IPR017871 ABC transporter, conserved site CDO28_RS33845 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS33850 IPR007324 Sugar-binding domain, putative CDO28_RS33850 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS33860 IPR007138 Antibiotic biosynthesis monooxygenase-like domain CDO28_RS33860 IPR011008 Dimeric alpha-beta barrel CDO28_RS33935 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS33935 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS33945 IPR000914 Bacterial extracellular solute-binding protein, family 5 CDO28_RS33945 IPR030678 CDO28_RS33945 CDO28_RS33950 IPR000515 MetI-like domain CDO28_RS33955 IPR000515 MetI-like domain CDO28_RS33960 IPR003439 ABC transporter-like CDO28_RS33960 IPR003593 AAA+ ATPase domain CDO28_RS33960 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CDO28_RS33960 IPR017871 ABC transporter, conserved site CDO28_RS33960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS33980 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CDO28_RS33985 IPR002104 Integrase, catalytic CDO28_RS33985 IPR010998 Integrase, Lambda-type, N-terminal CDO28_RS33985 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS33985 IPR013762 Integrase-like, catalytic core CDO28_RS33985 IPR023109 Integrase/recombinase, N-terminal CDO28_RS33995 IPR005090 Replication protein C CDO28_RS33995 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS33995 IPR021760 Replication protein-C C-terminal CDO28_RS34000 IPR003115 ParB/Sulfiredoxin CDO28_RS34000 IPR004437 ParB/RepB/Spo0J partition protein family CDO28_RS34000 IPR011111 RepB plasmid partition CDO28_RS34000 IPR017819 Plasmid partitioning protein, RepB CDO28_RS34005 IPR017818 Plasmid partitioning protein, RepA CDO28_RS34005 IPR025669 AAA domain CDO28_RS34005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS34010 IPR013610 Domain of unknown function DUF1738 CDO28_RS34010 IPR017113 Antirestriction, ArdC CDO28_RS34015 IPR003812 Fido domain CDO28_RS34025 IPR007948 Protein of unknown function DUF736 CDO28_RS34030 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CDO28_RS34035 IPR005090 Replication protein C CDO28_RS34035 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS34035 IPR021760 Replication protein-C C-terminal CDO28_RS34045 IPR002559 Transposase, IS4-like CDO28_RS34045 IPR032806 CDO28_RS34045 CDO28_RS34050 IPR029032 AhpD-like CDO28_RS34055 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS34060 IPR006439 HAD hydrolase, subfamily IA CDO28_RS34060 IPR023214 HAD-like domain CDO28_RS34070 IPR014774 Circadian clock protein KaiC/DNA repair protein RadA CDO28_RS34070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS34120 IPR001434 Domain of unknown function DUF11 CDO28_RS34120 IPR006626 Parallel beta-helix repeat CDO28_RS34120 IPR008962 PapD-like CDO28_RS34120 IPR028974 TSP type-3 repeat CDO28_RS34130 IPR009057 Homeodomain-like CDO28_RS34130 IPR018060 DNA binding HTH domain, AraC-type CDO28_RS34135 IPR000160 GGDEF domain CDO28_RS34135 IPR029787 Nucleotide cyclase CDO28_RS34160 IPR029058 Alpha/Beta hydrolase fold CDO28_RS34175 IPR002059 Cold-shock protein, DNA-binding CDO28_RS34175 IPR011129 Cold shock protein CDO28_RS34175 IPR012156 Cold shock, CspA CDO28_RS34175 IPR012340 Nucleic acid-binding, OB-fold CDO28_RS34190 IPR000524 Transcription regulator HTH, GntR CDO28_RS34190 IPR004839 Aminotransferase, class I/classII CDO28_RS34190 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS34190 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CDO28_RS34190 IPR015424 Pyridoxal phosphate-dependent transferase CDO28_RS34195 IPR007396 Transcriptional regulator PAI 2-type CDO28_RS34195 IPR012349 FMN-binding split barrel CDO28_RS34200 IPR005146 B3/B4 tRNA-binding domain CDO28_RS34200 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CDO28_RS34215 IPR029058 Alpha/Beta hydrolase fold CDO28_RS34240 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CDO28_RS34245 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CDO28_RS34255 IPR008258 Lytic transglycosylase-like SLT domain CDO28_RS34255 IPR023346 Lysozyme-like domain CDO28_RS34260 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CDO28_RS34265 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB CDO28_RS34270 IPR004346 CagE, TrbE, VirB component of type IV transporter system CDO28_RS34270 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain CDO28_RS34270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS34275 IPR008258 Lytic transglycosylase-like SLT domain CDO28_RS34275 IPR023346 Lysozyme-like domain CDO28_RS34280 IPR014158 Type IV secretion system, VirB5 CDO28_RS34280 IPR023220 Type IV secretion system, VirB5-domain CDO28_RS34290 IPR007688 Conjugal transfer, TrbL/VirB6 CDO28_RS34295 IPR007430 Bacterial virulence protein VirB8 CDO28_RS34295 IPR026264 Type IV secretion system protein VirB8/PtlE CDO28_RS34295 IPR032710 CDO28_RS34295 CDO28_RS34305 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CDO28_RS34310 IPR001482 Type II secretion system protein E CDO28_RS34310 IPR014155 Type IV secretion system protein VirB11 CDO28_RS34310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS34315 IPR003688 Ti-type conjugative transfer system, TraG-like CDO28_RS34315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS34345 IPR008775 Phytanoyl-CoA dioxygenase CDO28_RS34350 IPR011095 D-alanine--D-alanine ligase, C-terminal CDO28_RS34350 IPR013815 ATP-grasp fold, subdomain 1 CDO28_RS34350 IPR013816 ATP-grasp fold, subdomain 2 CDO28_RS34355 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related CDO28_RS34355 IPR023210 NADP-dependent oxidoreductase domain CDO28_RS34360 IPR001544 Aminotransferase, class IV CDO28_RS34365 IPR003099 Prephenate dehydrogenase CDO28_RS34365 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CDO28_RS34365 IPR016040 NAD(P)-binding domain CDO28_RS34370 IPR002701 Chorismate mutase CDO28_RS34370 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CDO28_RS34370 IPR018146 Glyoxalase I, conserved site CDO28_RS34370 IPR020822 Chorismate mutase, type II CDO28_RS34370 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS34375 IPR005801 ADC synthase CDO28_RS34375 IPR005802 Para-aminobenzoate synthase, component I CDO28_RS34375 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CDO28_RS34375 IPR006805 Anthranilate synthase component I, N-terminal CDO28_RS34375 IPR015890 Chorismate binding, C-terminal CDO28_RS34375 IPR017926 Glutamine amidotransferase CDO28_RS34375 IPR029062 Class I glutamine amidotransferase-like CDO28_RS34380 IPR000873 AMP-dependent synthetase/ligase CDO28_RS34380 IPR001242 Condensation domain CDO28_RS34380 IPR009081 Acyl carrier protein-like CDO28_RS34380 IPR010071 Amino acid adenylation domain CDO28_RS34380 IPR010080 Thioester reductase-like domain CDO28_RS34380 IPR013120 Male sterility, NAD-binding CDO28_RS34380 IPR016040 NAD(P)-binding domain CDO28_RS34380 IPR020845 AMP-binding, conserved site CDO28_RS34380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CDO28_RS34385 IPR000873 AMP-dependent synthetase/ligase CDO28_RS34385 IPR001242 Condensation domain CDO28_RS34385 IPR009081 Acyl carrier protein-like CDO28_RS34385 IPR010071 Amino acid adenylation domain CDO28_RS34385 IPR020806 Polyketide synthase, phosphopantetheine-binding domain CDO28_RS34385 IPR020845 AMP-binding, conserved site CDO28_RS34385 IPR025110 AMP-binding enzyme C-terminal domain CDO28_RS34390 IPR000873 AMP-dependent synthetase/ligase CDO28_RS34390 IPR006162 Phosphopantetheine attachment site CDO28_RS34390 IPR009081 Acyl carrier protein-like CDO28_RS34395 IPR012912 Plasmid pRiA4b, Orf3 CDO28_RS34395 IPR024047 Protein MM3350-like domain CDO28_RS34405 IPR008878 Transposase IS66, Orf2 CDO28_RS34410 IPR002104 Integrase, catalytic CDO28_RS34410 IPR004107 Integrase, SAM-like, N-terminal CDO28_RS34410 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS34410 IPR013762 Integrase-like, catalytic core CDO28_RS34410 IPR023109 Integrase/recombinase, N-terminal CDO28_RS34415 IPR002104 Integrase, catalytic CDO28_RS34415 IPR011010 DNA breaking-rejoining enzyme, catalytic core CDO28_RS34415 IPR013762 Integrase-like, catalytic core CDO28_RS34425 IPR008878 Transposase IS66, Orf2 CDO28_RS34430 IPR002514 Transposase IS3/IS911family CDO28_RS34430 IPR010921 Trp repressor/replication initiator CDO28_RS34430 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS34435 IPR003819 Taurine catabolism dioxygenase TauD/TfdA CDO28_RS34440 IPR008278 4'-phosphopantetheinyl transferase superfamily CDO28_RS34450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS34465 IPR007074 LicD CDO28_RS34470 IPR004821 Cytidyltransferase-like domain CDO28_RS34470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CDO28_RS34475 IPR010390 Protein of unknown function DUF990 CDO28_RS34480 IPR010390 Protein of unknown function DUF990 CDO28_RS34485 IPR003439 ABC transporter-like CDO28_RS34485 IPR003593 AAA+ ATPase domain CDO28_RS34485 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS34490 IPR001646 Pentapeptide repeat CDO28_RS34495 IPR001207 Transposase, mutator type CDO28_RS34515 IPR008687 Bacterial mobilisation CDO28_RS34520 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CDO28_RS34520 IPR003593 AAA+ ATPase domain CDO28_RS34520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS34535 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS34535 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS34540 IPR012310 DNA ligase, ATP-dependent, central CDO28_RS34575 IPR001387 Cro/C1-type helix-turn-helix domain CDO28_RS34575 IPR010982 Lambda repressor-like, DNA-binding domain CDO28_RS34590 IPR001789 Signal transduction response regulator, receiver domain CDO28_RS34590 IPR011006 CheY-like superfamily CDO28_RS34595 IPR011990 Tetratricopeptide-like helical domain CDO28_RS34610 IPR001647 DNA-binding HTH domain, TetR-type CDO28_RS34610 IPR009057 Homeodomain-like CDO28_RS34610 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CDO28_RS34610 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CDO28_RS34615 IPR011008 Dimeric alpha-beta barrel CDO28_RS34615 IPR012577 NIPSNAP CDO28_RS34625 IPR002793 Endonuclease NucS CDO28_RS34635 IPR001343 Haemolysin-type calcium-binding repeat CDO28_RS34635 IPR011049 Serralysin-like metalloprotease, C-terminal CDO28_RS34640 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CDO28_RS34645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CDO28_RS34660 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain CDO28_RS34665 IPR015032 MTH538 TIR-like domain CDO28_RS34670 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain CDO28_RS34675 IPR015032 MTH538 TIR-like domain CDO28_RS34680 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain CDO28_RS34700 IPR002514 Transposase IS3/IS911family CDO28_RS34700 IPR010921 Trp repressor/replication initiator CDO28_RS34700 IPR011991 Winged helix-turn-helix DNA-binding domain CDO28_RS34715 IPR007197 Radical SAM CDO28_RS34715 IPR013785 Aldolase-type TIM barrel