CDO28_RS00030 SM00354 helix_turn _helix lactose operon repressor CDO28_RS00045 SM00822 CDO28_RS00045 CDO28_RS00065 SM00421 helix_turn_helix, Lux Regulon CDO28_RS00070 SM00919 Malic enzyme, NAD binding domain CDO28_RS00070 SM01274 CDO28_RS00070 CDO28_RS00090 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CDO28_RS00100 SM00382 ATPases associated with a variety of cellular activities CDO28_RS00140 SM00422 helix_turn_helix, mercury resistance CDO28_RS00155 SM00382 ATPases associated with a variety of cellular activities CDO28_RS00160 SM00382 ATPases associated with a variety of cellular activities CDO28_RS00215 SM00905 Dihydroneopterin aldolase CDO28_RS00240 SM00855 Phosphoglycerate mutase family CDO28_RS00255 SM00091 PAS domain CDO28_RS00255 SM00387 Histidine kinase-like ATPases CDO28_RS00255 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS00255 SM00448 cheY-homologous receiver domain CDO28_RS00270 SM00382 ATPases associated with a variety of cellular activities CDO28_RS00275 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CDO28_RS00295 SM00860 SMI1 / KNR4 family CDO28_RS00300 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS00305 SM01329 CDO28_RS00305 CDO28_RS00325 SM00382 ATPases associated with a variety of cellular activities CDO28_RS00330 SM00363 S4 RNA-binding domain CDO28_RS00330 SM01390 CDO28_RS00330 CDO28_RS00385 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS00400 SM01211 CDO28_RS00400 CDO28_RS00480 SM00998 Adenylosuccinate lyase C-terminus CDO28_RS00510 SM00903 Flavin reductase like domain CDO28_RS00535 SM00852 Probable molybdopterin binding domain CDO28_RS00550 SM00487 DEAD-like helicases superfamily CDO28_RS00550 SM00490 helicase superfamily c-terminal domain CDO28_RS00585 SM00966 SpoVT / AbrB like domain CDO28_RS00605 SM00382 ATPases associated with a variety of cellular activities CDO28_RS00710 SM00357 Cold shock protein domain CDO28_RS00795 SM00344 helix_turn_helix ASNC type CDO28_RS00805 SM00849 Metallo-beta-lactamase superfamily CDO28_RS00850 SM00861 Transketolase, pyrimidine binding domain CDO28_RS00880 SM00346 helix_turn_helix isocitrate lyase regulation CDO28_RS00895 SM00822 CDO28_RS00895 CDO28_RS00915 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS01000 SM00829 Enoylreductase CDO28_RS01005 SM00382 ATPases associated with a variety of cellular activities CDO28_RS01025 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS01025 SM00895 CDO28_RS01025 CDO28_RS01030 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS01030 SM01091 Transporter associated domain CDO28_RS01040 SM00852 Probable molybdopterin binding domain CDO28_RS01090 SM00487 DEAD-like helicases superfamily CDO28_RS01090 SM00490 helicase superfamily c-terminal domain CDO28_RS01100 SM00487 DEAD-like helicases superfamily CDO28_RS01100 SM00490 helicase superfamily c-terminal domain CDO28_RS01100 SM00982 CDO28_RS01100 CDO28_RS01100 SM01058 CarD-like/TRCF domain CDO28_RS01140 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS01160 SM00992 Hemimethylated DNA-binding protein YccV like CDO28_RS01165 SM01230 CDO28_RS01165 CDO28_RS01170 SM00938 Nitrogen regulatory protein P-II CDO28_RS01185 SM00852 Probable molybdopterin binding domain CDO28_RS01310 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS01710 SM00344 helix_turn_helix ASNC type CDO28_RS01715 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CDO28_RS01715 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CDO28_RS01730 SM00450 Rhodanese Homology Domain CDO28_RS01735 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CDO28_RS01750 SM00966 SpoVT / AbrB like domain CDO28_RS01785 SM00480 DNA polymerase III beta subunit CDO28_RS01820 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS01845 SM00470 ParB-like nuclease domain CDO28_RS01855 SM00470 ParB-like nuclease domain CDO28_RS01870 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CDO28_RS01875 SM00507 HNH nucleases CDO28_RS02130 SM00936 Penicillin-binding protein 5, C-terminal domain CDO28_RS02160 SM00849 Metallo-beta-lactamase superfamily CDO28_RS02190 SM00028 Tetratricopeptide repeats CDO28_RS02190 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS02240 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS02295 SM00829 Enoylreductase CDO28_RS02300 SM00851 MGS-like domain CDO28_RS02300 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDO28_RS02340 SM00344 helix_turn_helix ASNC type CDO28_RS02355 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS02390 SM00434 DNA Topoisomerase IV CDO28_RS02455 SM00490 helicase superfamily c-terminal domain CDO28_RS02490 SM00318 Staphylococcal nuclease homologues CDO28_RS02525 SM00894 Excalibur calcium-binding domain CDO28_RS02530 SM00287 Bacterial SH3 domain homologues CDO28_RS02535 SM00487 DEAD-like helicases superfamily CDO28_RS02535 SM00490 helicase superfamily c-terminal domain CDO28_RS02535 SM00507 HNH nucleases CDO28_RS02545 SM00382 ATPases associated with a variety of cellular activities CDO28_RS02675 SM01323 CDO28_RS02675 CDO28_RS02685 SM00257 Lysin motif CDO28_RS02725 SM00382 ATPases associated with a variety of cellular activities CDO28_RS02750 SM00836 DALR anticodon binding domain CDO28_RS02750 SM01016 Arginyl tRNA synthetase N terminal dom CDO28_RS02755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDO28_RS02765 SM00155 Phospholipase D. Active site motifs. CDO28_RS02775 SM00671 Sel1-like repeats. CDO28_RS02830 SM00465 GIY-YIG type nucleases (URI domain) CDO28_RS02865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDO28_RS02940 SM00382 ATPases associated with a variety of cellular activities CDO28_RS02940 SM01086 C-terminal, D2-small domain, of ClpB protein CDO28_RS02960 SM00971 Serine acetyltransferase, N-terminal CDO28_RS02985 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS03000 SM00382 ATPases associated with a variety of cellular activities CDO28_RS03080 SM00382 ATPases associated with a variety of cellular activities CDO28_RS03080 SM00448 cheY-homologous receiver domain CDO28_RS03085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS03085 SM00387 Histidine kinase-like ATPases CDO28_RS03085 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS03090 SM00382 ATPases associated with a variety of cellular activities CDO28_RS03090 SM00448 cheY-homologous receiver domain CDO28_RS03095 SM00387 Histidine kinase-like ATPases CDO28_RS03095 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS03125 SM00729 Elongator protein 3, MiaB family, Radical SAM CDO28_RS03155 SM00861 Transketolase, pyrimidine binding domain CDO28_RS03170 SM01192 CDO28_RS03170 CDO28_RS03170 SM01193 CDO28_RS03170 CDO28_RS03205 SM00867 YceI-like domain CDO28_RS03220 SM00387 Histidine kinase-like ATPases CDO28_RS03220 SM00433 TopoisomeraseII CDO28_RS03245 SM00903 Flavin reductase like domain CDO28_RS03260 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CDO28_RS03275 SM01234 CDO28_RS03275 CDO28_RS03310 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS03380 SM00422 helix_turn_helix, mercury resistance CDO28_RS03385 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS03385 SM00924 MgtE intracellular N domain CDO28_RS03415 SM00763 PrkA AAA domain CDO28_RS03430 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS03480 SM00382 ATPases associated with a variety of cellular activities CDO28_RS03485 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDO28_RS03510 SM00662 RNA polymerases D CDO28_RS03575 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CDO28_RS03580 SM01374 CDO28_RS03580 CDO28_RS03600 SM00322 K homology RNA-binding domain CDO28_RS03615 SM01382 CDO28_RS03615 CDO28_RS03615 SM01383 CDO28_RS03615 CDO28_RS03635 SM01403 CDO28_RS03635 CDO28_RS03645 SM00838 Elongation factor G C-terminus CDO28_RS03645 SM00889 Elongation factor G, domain IV CDO28_RS03665 SM00663 RNA polymerase I subunit A N-terminus CDO28_RS03690 SM00649 Ribosomal protein L11/L12 CDO28_RS03695 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CDO28_RS03695 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CDO28_RS03735 SM00967 RNA 2'-O ribose methyltransferase substrate binding CDO28_RS03780 SM00937 CDO28_RS03780 CDO28_RS03795 SM00646 CDO28_RS03795 CDO28_RS03855 SM00878 Biotin carboxylase C-terminal domain CDO28_RS03880 SM00845 GatB domain CDO28_RS03900 SM00849 Metallo-beta-lactamase superfamily CDO28_RS03905 SM00732 Likely ribonuclease with RNase H fold. CDO28_RS03940 SM01207 CDO28_RS03940 CDO28_RS03950 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CDO28_RS03950 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CDO28_RS03950 SM00493 CDO28_RS03950 CDO28_RS03955 SM00316 Ribosomal protein S1-like RNA-binding domain CDO28_RS03955 SM00955 CDO28_RS03955 CDO28_RS03980 SM00267 diguanylate cyclase CDO28_RS03980 SM00448 cheY-homologous receiver domain CDO28_RS03985 SM00448 cheY-homologous receiver domain CDO28_RS04005 SM00481 DNA polymerase alpha chain like domain CDO28_RS04010 SM00382 ATPases associated with a variety of cellular activities CDO28_RS04050 SM00849 Metallo-beta-lactamase superfamily CDO28_RS04095 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDO28_RS04105 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDO28_RS04175 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS04190 SM00411 bacterial (prokaryotic) histone like domain CDO28_RS04195 SM00382 ATPases associated with a variety of cellular activities CDO28_RS04195 SM00464 Found in ATP-dependent protease La (LON) CDO28_RS04200 SM00382 ATPases associated with a variety of cellular activities CDO28_RS04200 SM00994 ClpX C4-type zinc finger CDO28_RS04200 SM01086 C-terminal, D2-small domain, of ClpB protein CDO28_RS04210 SM00155 Phospholipase D. Active site motifs. CDO28_RS04240 SM00881 CoA binding domain CDO28_RS04280 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDO28_RS04365 SM00422 helix_turn_helix, mercury resistance CDO28_RS04370 SM00411 bacterial (prokaryotic) histone like domain CDO28_RS04460 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS04470 SM01004 Delta-aminolevulinic acid dehydratase CDO28_RS04490 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS04495 SM00434 DNA Topoisomerase IV CDO28_RS04515 SM00450 Rhodanese Homology Domain CDO28_RS04540 SM00474 3'-5' exonuclease CDO28_RS04545 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS04600 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDO28_RS04635 SM00465 GIY-YIG type nucleases (URI domain) CDO28_RS04675 SM00562 CDO28_RS04675 CDO28_RS04700 SM00382 ATPases associated with a variety of cellular activities CDO28_RS04760 SM00650 Ribosomal RNA adenine dimethylases CDO28_RS04770 SM00072 Guanylate kinase homologues. CDO28_RS04785 SM00825 Beta-ketoacyl synthase CDO28_RS04795 SM00822 CDO28_RS04795 CDO28_RS04800 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CDO28_RS04845 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS04850 SM00382 ATPases associated with a variety of cellular activities CDO28_RS04865 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS04870 SM01005 Alanine racemase, C-terminal domain CDO28_RS04875 SM00382 ATPases associated with a variety of cellular activities CDO28_RS04905 SM00382 ATPases associated with a variety of cellular activities CDO28_RS04910 SM00257 Lysin motif CDO28_RS04925 SM00917 LeuA allosteric (dimerisation) domain CDO28_RS05020 SM00382 ATPases associated with a variety of cellular activities CDO28_RS05055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDO28_RS05090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS05100 SM00984 UDP binding domain CDO28_RS05110 SM00316 Ribosomal protein S1-like RNA-binding domain CDO28_RS05110 SM00732 Likely ribonuclease with RNase H fold. CDO28_RS05125 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS05150 SM00358 Double-stranded RNA binding motif CDO28_RS05150 SM00535 Ribonuclease III family CDO28_RS05180 SM00966 SpoVT / AbrB like domain CDO28_RS05185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDO28_RS05185 SM00954 Region found in RelA / SpoT proteins CDO28_RS05190 SM01409 CDO28_RS05190 CDO28_RS05200 SM00869 Autotransporter beta-domain CDO28_RS05215 SM01130 CDO28_RS05215 CDO28_RS05255 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS05335 SM00829 Enoylreductase CDO28_RS05365 SM00986 Uracil DNA glycosylase superfamily CDO28_RS05365 SM00987 UreE urease accessory protein, C-terminal domain CDO28_RS05395 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDO28_RS05395 SM00387 Histidine kinase-like ATPases CDO28_RS05395 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS05405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS05405 SM00387 Histidine kinase-like ATPases CDO28_RS05405 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS05410 SM00448 cheY-homologous receiver domain CDO28_RS05410 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS05415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDO28_RS05445 SM00387 Histidine kinase-like ATPases CDO28_RS05450 SM00448 cheY-homologous receiver domain CDO28_RS05450 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS05505 SM00287 Bacterial SH3 domain homologues CDO28_RS05525 SM00387 Histidine kinase-like ATPases CDO28_RS05525 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS05625 SM00564 beta-propeller repeat CDO28_RS05635 SM00422 helix_turn_helix, mercury resistance CDO28_RS05685 SM00829 Enoylreductase CDO28_RS05735 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS05745 SM00052 Putative diguanylate phosphodiesterase CDO28_RS05745 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDO28_RS05745 SM00267 diguanylate cyclase CDO28_RS05780 SM00829 Enoylreductase CDO28_RS05785 SM00052 Putative diguanylate phosphodiesterase CDO28_RS05785 SM00267 diguanylate cyclase CDO28_RS05845 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS05880 SM00849 Metallo-beta-lactamase superfamily CDO28_RS05905 SM00968 SMC proteins Flexible Hinge Domain CDO28_RS05925 SM00478 endonuclease III CDO28_RS05940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS05975 SM00052 Putative diguanylate phosphodiesterase CDO28_RS05975 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDO28_RS05975 SM00267 diguanylate cyclase CDO28_RS06080 SM00855 Phosphoglycerate mutase family CDO28_RS06090 SM00271 DnaJ molecular chaperone homology domain CDO28_RS06125 SM00382 ATPases associated with a variety of cellular activities CDO28_RS06155 SM00829 Enoylreductase CDO28_RS06175 SM00861 Transketolase, pyrimidine binding domain CDO28_RS06180 SM00363 S4 RNA-binding domain CDO28_RS06190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDO28_RS06190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS06275 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS06290 SM00052 Putative diguanylate phosphodiesterase CDO28_RS06290 SM00267 diguanylate cyclase CDO28_RS06295 SM01209 CDO28_RS06295 CDO28_RS06295 SM01210 CDO28_RS06295 CDO28_RS06360 SM00028 Tetratricopeptide repeats CDO28_RS06370 SM00852 Probable molybdopterin binding domain CDO28_RS06385 SM00729 Elongator protein 3, MiaB family, Radical SAM CDO28_RS06445 SM00421 helix_turn_helix, Lux Regulon CDO28_RS06450 SM00421 helix_turn_helix, Lux Regulon CDO28_RS06455 SM00346 helix_turn_helix isocitrate lyase regulation CDO28_RS06460 SM00822 CDO28_RS06460 CDO28_RS06505 SM00052 Putative diguanylate phosphodiesterase CDO28_RS06505 SM00267 diguanylate cyclase CDO28_RS06510 SM00091 PAS domain CDO28_RS06510 SM00448 cheY-homologous receiver domain CDO28_RS06515 SM00853 MutL C terminal dimerisation domain CDO28_RS06515 SM01340 CDO28_RS06515 CDO28_RS06585 SM00363 S4 RNA-binding domain CDO28_RS06610 SM00904 Riboflavin kinase CDO28_RS06620 SM00450 Rhodanese Homology Domain CDO28_RS06625 SM00883 Chaperonin 10 Kd subunit CDO28_RS06720 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS06720 SM00895 CDO28_RS06720 CDO28_RS06770 SM01060 CDO28_RS06770 CDO28_RS06790 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS06790 SM01240 CDO28_RS06790 CDO28_RS06795 SM00849 Metallo-beta-lactamase superfamily CDO28_RS06925 SM00448 cheY-homologous receiver domain CDO28_RS06945 SM00382 ATPases associated with a variety of cellular activities CDO28_RS06950 SM00382 ATPases associated with a variety of cellular activities CDO28_RS07020 SM00091 PAS domain CDO28_RS07020 SM00387 Histidine kinase-like ATPases CDO28_RS07020 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS07050 SM00382 ATPases associated with a variety of cellular activities CDO28_RS07060 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS07085 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDO28_RS07085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS07100 SM01230 CDO28_RS07100 CDO28_RS07140 SM00382 ATPases associated with a variety of cellular activities CDO28_RS07145 SM00642 Alpha-amylase domain CDO28_RS07165 SM00354 helix_turn _helix lactose operon repressor CDO28_RS07245 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS07320 SM00858 CDO28_RS07320 CDO28_RS07350 SM00382 ATPases associated with a variety of cellular activities CDO28_RS07395 SM00421 helix_turn_helix, Lux Regulon CDO28_RS07400 SM00421 helix_turn_helix, Lux Regulon CDO28_RS07435 SM00448 cheY-homologous receiver domain CDO28_RS07440 SM00448 cheY-homologous receiver domain CDO28_RS07445 SM00138 Methyltransferase, chemotaxis proteins CDO28_RS07450 SM00260 Two component signalling adaptor domain CDO28_RS07455 SM00073 Histidine Phosphotransfer domain CDO28_RS07455 SM00260 Two component signalling adaptor domain CDO28_RS07455 SM00387 Histidine kinase-like ATPases CDO28_RS07455 SM01231 CDO28_RS07455 CDO28_RS07460 SM00448 cheY-homologous receiver domain CDO28_RS07470 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDO28_RS07495 SM00382 ATPases associated with a variety of cellular activities CDO28_RS07505 SM00420 helix_turn_helix, Deoxyribose operon repressor CDO28_RS07505 SM01134 CDO28_RS07505 CDO28_RS07510 SM01007 Class II Aldolase and Adducin N-terminal domain CDO28_RS07595 SM00226 Low molecular weight phosphatase family CDO28_RS07630 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS07690 SM00822 CDO28_RS07690 CDO28_RS07690 SM00823 Phosphopantetheine attachment site CDO28_RS07690 SM00825 Beta-ketoacyl synthase CDO28_RS07690 SM00826 CDO28_RS07690 CDO28_RS07690 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CDO28_RS07690 SM00829 Enoylreductase CDO28_RS07700 SM00822 CDO28_RS07700 CDO28_RS07755 SM00382 ATPases associated with a variety of cellular activities CDO28_RS07760 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS07790 SM00830 Chorismate mutase type II CDO28_RS07810 SM00387 Histidine kinase-like ATPases CDO28_RS07810 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS07810 SM00448 cheY-homologous receiver domain CDO28_RS07815 SM00421 helix_turn_helix, Lux Regulon CDO28_RS07815 SM00448 cheY-homologous receiver domain CDO28_RS07870 SM00487 DEAD-like helicases superfamily CDO28_RS07870 SM00490 helicase superfamily c-terminal domain CDO28_RS07900 SM00671 Sel1-like repeats. CDO28_RS07955 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS08005 SM00448 cheY-homologous receiver domain CDO28_RS08005 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS08015 SM00382 ATPases associated with a variety of cellular activities CDO28_RS08035 SM00387 Histidine kinase-like ATPases CDO28_RS08035 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS08070 SM00563 Phosphate acyltransferases CDO28_RS08120 SM00382 ATPases associated with a variety of cellular activities CDO28_RS08150 SM00100 Cyclic nucleotide-monophosphate binding domain CDO28_RS08155 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS08155 SM01080 CDO28_RS08155 CDO28_RS08285 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS08285 SM00387 Histidine kinase-like ATPases CDO28_RS08305 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDO28_RS08305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS08360 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS08390 SM00487 DEAD-like helicases superfamily CDO28_RS08390 SM00490 helicase superfamily c-terminal domain CDO28_RS08460 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDO28_RS08460 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS08490 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS08500 SM01091 Transporter associated domain CDO28_RS08515 SM00729 Elongator protein 3, MiaB family, Radical SAM CDO28_RS08520 SM00563 Phosphate acyltransferases CDO28_RS08535 SM00932 Scaffold protein Nfu/NifU N terminal CDO28_RS08560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CDO28_RS08565 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CDO28_RS08565 SM00534 ATPase domain of DNA mismatch repair MUTS family CDO28_RS08570 SM00919 Malic enzyme, NAD binding domain CDO28_RS08570 SM01274 CDO28_RS08570 CDO28_RS08580 SM00387 Histidine kinase-like ATPases CDO28_RS08580 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS08580 SM00448 cheY-homologous receiver domain CDO28_RS08590 SM00967 RNA 2'-O ribose methyltransferase substrate binding CDO28_RS08610 SM00411 bacterial (prokaryotic) histone like domain CDO28_RS08630 SM00382 ATPases associated with a variety of cellular activities CDO28_RS08680 SM00729 Elongator protein 3, MiaB family, Radical SAM CDO28_RS08705 SM00382 ATPases associated with a variety of cellular activities CDO28_RS08705 SM00760 Bacterial dnaA protein helix-turn-helix domain CDO28_RS08725 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CDO28_RS08725 SM01232 CDO28_RS08725 CDO28_RS08745 SM00248 ankyrin repeats CDO28_RS08820 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS08840 SM00344 helix_turn_helix ASNC type CDO28_RS08865 SM00382 ATPases associated with a variety of cellular activities CDO28_RS08885 SM00480 DNA polymerase III beta subunit CDO28_RS08900 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CDO28_RS09060 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS09075 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS09100 SM00822 CDO28_RS09100 CDO28_RS09125 SM00873 B3/4 domain CDO28_RS09125 SM00874 tRNA synthetase B5 domain CDO28_RS09125 SM00896 Ferredoxin-fold anticodon binding domain CDO28_RS09170 SM00841 Elongation factor P, C-terminal CDO28_RS09170 SM01185 CDO28_RS09170 CDO28_RS09200 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS09260 SM00474 3'-5' exonuclease CDO28_RS09275 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS09275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS09305 SM00316 Ribosomal protein S1-like RNA-binding domain CDO28_RS09350 SM00825 Beta-ketoacyl synthase CDO28_RS09365 SM00316 Ribosomal protein S1-like RNA-binding domain CDO28_RS09365 SM00322 K homology RNA-binding domain CDO28_RS09370 SM01387 CDO28_RS09370 CDO28_RS09375 SM00911 HWE histidine kinase CDO28_RS09400 SM00316 Ribosomal protein S1-like RNA-binding domain CDO28_RS09400 SM00322 K homology RNA-binding domain CDO28_RS09420 SM00493 CDO28_RS09420 CDO28_RS09435 SM00382 ATPases associated with a variety of cellular activities CDO28_RS09525 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS09600 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS09600 SM00866 CDO28_RS09600 CDO28_RS09635 SM00382 ATPases associated with a variety of cellular activities CDO28_RS09665 SM00382 ATPases associated with a variety of cellular activities CDO28_RS09690 SM00271 DnaJ molecular chaperone homology domain CDO28_RS09725 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS09730 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CDO28_RS09730 SM00474 3'-5' exonuclease CDO28_RS09730 SM00475 5'-3' exonuclease CDO28_RS09730 SM00479 CDO28_RS09730 CDO28_RS09730 SM00482 DNA polymerase A domain CDO28_RS09740 SM00287 Bacterial SH3 domain homologues CDO28_RS09765 SM00478 endonuclease III CDO28_RS09775 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS09780 SM00855 Phosphoglycerate mutase family CDO28_RS09790 SM00382 ATPases associated with a variety of cellular activities CDO28_RS09800 SM00851 MGS-like domain CDO28_RS09825 SM00382 ATPases associated with a variety of cellular activities CDO28_RS09840 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS09890 SM00858 CDO28_RS09890 CDO28_RS09935 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CDO28_RS09960 SM00382 ATPases associated with a variety of cellular activities CDO28_RS10040 SM00382 ATPases associated with a variety of cellular activities CDO28_RS10055 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS10055 SM00895 CDO28_RS10055 CDO28_RS10115 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS10150 SM01230 CDO28_RS10150 CDO28_RS10170 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS10205 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS10295 SM00382 ATPases associated with a variety of cellular activities CDO28_RS10300 SM00487 DEAD-like helicases superfamily CDO28_RS10300 SM00490 helicase superfamily c-terminal domain CDO28_RS10300 SM00847 Helicase associated domain (HA2) Add an annotation CDO28_RS10305 SM00387 Histidine kinase-like ATPases CDO28_RS10305 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS10310 SM00448 cheY-homologous receiver domain CDO28_RS10345 SM00382 ATPases associated with a variety of cellular activities CDO28_RS10345 SM01086 C-terminal, D2-small domain, of ClpB protein CDO28_RS10350 SM01006 Siderophore biosynthesis protein domain CDO28_RS10400 SM00257 Lysin motif CDO28_RS10400 SM00749 bacterial OsmY and nodulation domain CDO28_RS10415 SM00448 cheY-homologous receiver domain CDO28_RS10415 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS10420 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS10420 SM00387 Histidine kinase-like ATPases CDO28_RS10420 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS10445 SM00996 S-adenosyl-L-homocysteine hydrolase CDO28_RS10445 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CDO28_RS10450 SM00387 Histidine kinase-like ATPases CDO28_RS10450 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS10535 SM00382 ATPases associated with a variety of cellular activities CDO28_RS10550 SM00858 CDO28_RS10550 CDO28_RS10555 SM00895 CDO28_RS10555 CDO28_RS10575 SM00387 Histidine kinase-like ATPases CDO28_RS10575 SM00433 TopoisomeraseII CDO28_RS10580 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS10585 SM00463 Small MutS-related domain CDO28_RS10590 SM00925 MltA specific insert domain CDO28_RS10595 SM00978 CDO28_RS10595 CDO28_RS10610 SM00479 CDO28_RS10610 CDO28_RS10645 SM00357 Cold shock protein domain CDO28_RS10645 SM00382 ATPases associated with a variety of cellular activities CDO28_RS10645 SM00959 Rho termination factor, N-terminal domain CDO28_RS10655 SM01228 CDO28_RS10655 CDO28_RS10670 SM00470 ParB-like nuclease domain CDO28_RS10735 SM00798 AICARFT/IMPCHase bienzyme CDO28_RS10735 SM00851 MGS-like domain CDO28_RS10760 SM00947 Carbonic anhydrase CDO28_RS10775 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDO28_RS10785 SM00966 SpoVT / AbrB like domain CDO28_RS10800 SM00014 Acid phosphatase homologues CDO28_RS10805 SM01329 CDO28_RS10805 CDO28_RS10825 SM00354 helix_turn _helix lactose operon repressor CDO28_RS10835 SM00882 Coenzyme A transferase CDO28_RS10865 SM00382 ATPases associated with a variety of cellular activities CDO28_RS10895 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS10915 SM01150 CDO28_RS10915 CDO28_RS10930 SM01068 Putative carbohydrate binding domain CDO28_RS10945 SM00382 ATPases associated with a variety of cellular activities CDO28_RS10950 SM00421 helix_turn_helix, Lux Regulon CDO28_RS10955 SM00878 Biotin carboxylase C-terminal domain CDO28_RS10960 SM00382 ATPases associated with a variety of cellular activities CDO28_RS10970 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS10975 SM00420 helix_turn_helix, Deoxyribose operon repressor CDO28_RS10975 SM01134 CDO28_RS10975 CDO28_RS11030 SM00822 CDO28_RS11030 CDO28_RS11035 SM00490 helicase superfamily c-terminal domain CDO28_RS11040 SM00363 S4 RNA-binding domain CDO28_RS11050 SM01058 CarD-like/TRCF domain CDO28_RS11065 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11085 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CDO28_RS11090 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11100 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS11100 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CDO28_RS11130 SM00830 Chorismate mutase type II CDO28_RS11135 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11135 SM00962 SRP54-type protein, GTPase domain CDO28_RS11135 SM00963 SRP54-type protein, helical bundle domain CDO28_RS11145 SM00729 Elongator protein 3, MiaB family, Radical SAM CDO28_RS11150 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11150 SM00962 SRP54-type protein, GTPase domain CDO28_RS11150 SM00963 SRP54-type protein, helical bundle domain CDO28_RS11185 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS11235 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11285 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11305 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS11320 SM00855 Phosphoglycerate mutase family CDO28_RS11330 SM00448 cheY-homologous receiver domain CDO28_RS11330 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS11335 SM00100 Cyclic nucleotide-monophosphate binding domain CDO28_RS11355 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11390 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11390 SM00843 CDO28_RS11390 CDO28_RS11400 SM00938 Nitrogen regulatory protein P-II CDO28_RS11425 SM00464 Found in ATP-dependent protease La (LON) CDO28_RS11445 SM00833 Cobalamin synthesis protein cobW C-terminal domain CDO28_RS11495 SM00481 DNA polymerase alpha chain like domain CDO28_RS11520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDO28_RS11520 SM00245 tail specific protease CDO28_RS11550 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CDO28_RS11615 SM00838 Elongation factor G C-terminus CDO28_RS11760 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11775 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS11795 SM00881 CoA binding domain CDO28_RS11800 SM00861 Transketolase, pyrimidine binding domain CDO28_RS11840 SM00563 Phosphate acyltransferases CDO28_RS11870 SM00487 DEAD-like helicases superfamily CDO28_RS11870 SM00490 helicase superfamily c-terminal domain CDO28_RS11895 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11910 SM00344 helix_turn_helix ASNC type CDO28_RS11930 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11980 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11985 SM00382 ATPases associated with a variety of cellular activities CDO28_RS11995 SM00420 helix_turn_helix, Deoxyribose operon repressor CDO28_RS11995 SM01134 CDO28_RS11995 CDO28_RS12000 SM00822 CDO28_RS12000 CDO28_RS12015 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDO28_RS12025 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDO28_RS12025 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDO28_RS12040 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDO28_RS12040 SM00091 PAS domain CDO28_RS12040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDO28_RS12045 SM00260 Two component signalling adaptor domain CDO28_RS12055 SM00344 helix_turn_helix ASNC type CDO28_RS12105 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS12110 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDO28_RS12165 SM01018 B12 binding domain CDO28_RS12190 SM00382 ATPases associated with a variety of cellular activities CDO28_RS12195 SM00382 ATPases associated with a variety of cellular activities CDO28_RS12255 SM00382 ATPases associated with a variety of cellular activities CDO28_RS12260 SM00382 ATPases associated with a variety of cellular activities CDO28_RS12285 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS12305 SM00382 ATPases associated with a variety of cellular activities CDO28_RS12330 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS12330 SM00866 CDO28_RS12330 CDO28_RS12340 SM00052 Putative diguanylate phosphodiesterase CDO28_RS12340 SM00267 diguanylate cyclase CDO28_RS12370 SM00382 ATPases associated with a variety of cellular activities CDO28_RS12385 SM00421 helix_turn_helix, Lux Regulon CDO28_RS12395 SM00344 helix_turn_helix ASNC type CDO28_RS12400 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS12435 SM00861 Transketolase, pyrimidine binding domain CDO28_RS12455 SM00382 ATPases associated with a variety of cellular activities CDO28_RS12475 SM00986 Uracil DNA glycosylase superfamily CDO28_RS12475 SM00987 UreE urease accessory protein, C-terminal domain CDO28_RS12560 SM00052 Putative diguanylate phosphodiesterase CDO28_RS12560 SM00267 diguanylate cyclase CDO28_RS12560 SM01079 CDO28_RS12560 CDO28_RS12600 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS12600 SM00871 Bacterial transcription activator, effector binding domain CDO28_RS12625 SM00354 helix_turn _helix lactose operon repressor CDO28_RS12655 SM00382 ATPases associated with a variety of cellular activities CDO28_RS12655 SM00930 CDO28_RS12655 CDO28_RS12670 SM00450 Rhodanese Homology Domain CDO28_RS12675 SM00880 CDO28_RS12675 CDO28_RS12680 SM01118 CDO28_RS12680 CDO28_RS12755 SM00320 WD40 repeats CDO28_RS12760 SM00833 Cobalamin synthesis protein cobW C-terminal domain CDO28_RS12770 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS12775 SM00354 helix_turn _helix lactose operon repressor CDO28_RS12790 SM00052 Putative diguanylate phosphodiesterase CDO28_RS12790 SM00091 PAS domain CDO28_RS12790 SM00267 diguanylate cyclase CDO28_RS12800 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CDO28_RS12800 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CDO28_RS12815 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS12825 SM00028 Tetratricopeptide repeats CDO28_RS12860 SM00829 Enoylreductase CDO28_RS12875 SM00642 Alpha-amylase domain CDO28_RS12895 SM00642 Alpha-amylase domain CDO28_RS12905 SM00327 von Willebrand factor (vWF) type A domain CDO28_RS12910 SM00460 Transglutaminase/protease-like homologues CDO28_RS12940 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS12990 SM00448 cheY-homologous receiver domain CDO28_RS13020 SM00382 ATPases associated with a variety of cellular activities CDO28_RS13040 SM00421 helix_turn_helix, Lux Regulon CDO28_RS13095 SM00244 prohibitin homologues CDO28_RS13105 SM00257 Lysin motif CDO28_RS13120 SM00267 diguanylate cyclase CDO28_RS13140 SM00382 ATPases associated with a variety of cellular activities CDO28_RS13140 SM00448 cheY-homologous receiver domain CDO28_RS13175 SM00028 Tetratricopeptide repeats CDO28_RS13190 SM01001 AIR carboxylase CDO28_RS13205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS13220 SM00671 Sel1-like repeats. CDO28_RS13240 SM00382 ATPases associated with a variety of cellular activities CDO28_RS13270 SM00028 Tetratricopeptide repeats CDO28_RS13270 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS13295 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDO28_RS13300 SM00861 Transketolase, pyrimidine binding domain CDO28_RS13375 SM00382 ATPases associated with a variety of cellular activities CDO28_RS13445 SM00382 ATPases associated with a variety of cellular activities CDO28_RS13480 SM00788 Adenylosuccinate synthetase CDO28_RS13495 SM00363 S4 RNA-binding domain CDO28_RS13525 SM00448 cheY-homologous receiver domain CDO28_RS13530 SM00448 cheY-homologous receiver domain CDO28_RS13530 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS13550 SM00421 helix_turn_helix, Lux Regulon CDO28_RS13620 SM00382 ATPases associated with a variety of cellular activities CDO28_RS13640 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS13640 SM00866 CDO28_RS13640 CDO28_RS13650 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS13660 SM00344 helix_turn_helix ASNC type CDO28_RS13665 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS13670 SM00829 Enoylreductase CDO28_RS13675 SM00344 helix_turn_helix ASNC type CDO28_RS13690 SM00833 Cobalamin synthesis protein cobW C-terminal domain CDO28_RS13750 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS13750 SM01091 Transporter associated domain CDO28_RS13760 SM00271 DnaJ molecular chaperone homology domain CDO28_RS13770 SM00327 von Willebrand factor (vWF) type A domain CDO28_RS13805 SM00849 Metallo-beta-lactamase superfamily CDO28_RS13835 SM00563 Phosphate acyltransferases CDO28_RS13850 SM00382 ATPases associated with a variety of cellular activities CDO28_RS13870 SM00448 cheY-homologous receiver domain CDO28_RS13910 SM00893 Electron transfer flavoprotein domain CDO28_RS13915 SM00893 Electron transfer flavoprotein domain CDO28_RS13950 SM00478 endonuclease III CDO28_RS13955 SM00507 HNH nucleases CDO28_RS14000 SM00957 SecA DEAD-like domain CDO28_RS14000 SM00958 SecA preprotein cross-linking domain CDO28_RS14075 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDO28_RS14080 SM00937 CDO28_RS14080 CDO28_RS14100 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14100 SM01086 C-terminal, D2-small domain, of ClpB protein CDO28_RS14145 SM00849 Metallo-beta-lactamase superfamily CDO28_RS14165 SM00903 Flavin reductase like domain CDO28_RS14170 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS14170 SM00895 CDO28_RS14170 CDO28_RS14175 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14180 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14245 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14250 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14275 SM01230 CDO28_RS14275 CDO28_RS14300 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14320 SM00861 Transketolase, pyrimidine binding domain CDO28_RS14330 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS14330 SM00866 CDO28_RS14330 CDO28_RS14345 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14370 SM01133 CDO28_RS14370 CDO28_RS14380 SM00849 Metallo-beta-lactamase superfamily CDO28_RS14405 SM00822 CDO28_RS14405 CDO28_RS14425 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS14425 SM00895 CDO28_RS14425 CDO28_RS14450 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14480 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14515 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14545 SM00829 Enoylreductase CDO28_RS14605 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14630 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS14630 SM00895 CDO28_RS14630 CDO28_RS14640 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS14640 SM00895 CDO28_RS14640 CDO28_RS14645 SM01230 CDO28_RS14645 CDO28_RS14700 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14785 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14790 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14805 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS14860 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS14880 SM00988 UreE urease accessory protein, N-terminal domain CDO28_RS14925 SM00382 ATPases associated with a variety of cellular activities CDO28_RS14955 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS14965 SM00829 Enoylreductase CDO28_RS15000 SM00382 ATPases associated with a variety of cellular activities CDO28_RS15005 SM00822 CDO28_RS15005 CDO28_RS15025 SM00448 cheY-homologous receiver domain CDO28_RS15040 SM00091 PAS domain CDO28_RS15040 SM00911 HWE histidine kinase CDO28_RS15055 SM00382 ATPases associated with a variety of cellular activities CDO28_RS15120 SM00670 Large family of predicted nucleotide-binding domains CDO28_RS15125 SM00966 SpoVT / AbrB like domain CDO28_RS15160 SM00382 ATPases associated with a variety of cellular activities CDO28_RS15165 SM00382 ATPases associated with a variety of cellular activities CDO28_RS15175 SM00642 Alpha-amylase domain CDO28_RS15195 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS15205 SM00382 ATPases associated with a variety of cellular activities CDO28_RS15325 SM00917 LeuA allosteric (dimerisation) domain CDO28_RS15480 SM01400 CDO28_RS15480 CDO28_RS15530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS15530 SM00387 Histidine kinase-like ATPases CDO28_RS15530 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS15535 SM00448 cheY-homologous receiver domain CDO28_RS15535 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS15540 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS15560 SM00849 Metallo-beta-lactamase superfamily CDO28_RS15570 SM00357 Cold shock protein domain CDO28_RS15610 SM00822 CDO28_RS15610 CDO28_RS15620 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CDO28_RS15630 SM00400 zinc finger CDO28_RS15630 SM00493 CDO28_RS15630 CDO28_RS15635 SM00341 Helicase and RNase D C-terminal CDO28_RS15635 SM00487 DEAD-like helicases superfamily CDO28_RS15635 SM00490 helicase superfamily c-terminal domain CDO28_RS15635 SM00956 CDO28_RS15635 CDO28_RS15645 SM00829 Enoylreductase CDO28_RS15925 SM00382 ATPases associated with a variety of cellular activities CDO28_RS15950 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CDO28_RS15960 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS15965 SM00382 ATPases associated with a variety of cellular activities CDO28_RS15990 SM00881 CoA binding domain CDO28_RS16015 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS16040 SM00382 ATPases associated with a variety of cellular activities CDO28_RS16045 SM00421 helix_turn_helix, Lux Regulon CDO28_RS16070 SM00382 ATPases associated with a variety of cellular activities CDO28_RS16075 SM00382 ATPases associated with a variety of cellular activities CDO28_RS16090 SM01007 Class II Aldolase and Adducin N-terminal domain CDO28_RS16100 SM01007 Class II Aldolase and Adducin N-terminal domain CDO28_RS16120 SM00420 helix_turn_helix, Deoxyribose operon repressor CDO28_RS16120 SM01134 CDO28_RS16120 CDO28_RS16150 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS16160 SM00382 ATPases associated with a variety of cellular activities CDO28_RS16195 SM01230 CDO28_RS16195 CDO28_RS16260 SM00382 ATPases associated with a variety of cellular activities CDO28_RS16265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS16290 SM00641 Glycosyl hydrolases family 25 CDO28_RS16325 SM00271 DnaJ molecular chaperone homology domain CDO28_RS16330 SM00644 CDO28_RS16330 CDO28_RS16430 SM00842 Cell division protein FtsA CDO28_RS16435 SM00864 Tubulin/FtsZ family, GTPase domain CDO28_RS16435 SM00865 Tubulin/FtsZ family, C-terminal domain CDO28_RS16455 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CDO28_RS16455 SM00292 breast cancer carboxy-terminal domain CDO28_RS16455 SM00532 Ligase N family CDO28_RS16525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDO28_RS16525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS16530 SM00260 Two component signalling adaptor domain CDO28_RS16550 SM00267 diguanylate cyclase CDO28_RS16670 SM00244 prohibitin homologues CDO28_RS16675 SM00244 prohibitin homologues CDO28_RS16690 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDO28_RS16740 SM00357 Cold shock protein domain CDO28_RS16815 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS16865 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS16890 SM00344 helix_turn_helix ASNC type CDO28_RS16940 SM00382 ATPases associated with a variety of cellular activities CDO28_RS17015 SM00357 Cold shock protein domain CDO28_RS17035 SM00382 ATPases associated with a variety of cellular activities CDO28_RS17040 SM00382 ATPases associated with a variety of cellular activities CDO28_RS17050 SM00864 Tubulin/FtsZ family, GTPase domain CDO28_RS17050 SM00865 Tubulin/FtsZ family, C-terminal domain CDO28_RS17055 SM00028 Tetratricopeptide repeats CDO28_RS17140 SM00382 ATPases associated with a variety of cellular activities CDO28_RS17150 SM00965 Secretin and TonB N terminus short domain CDO28_RS17165 SM00978 CDO28_RS17165 CDO28_RS17190 SM00760 Bacterial dnaA protein helix-turn-helix domain CDO28_RS17345 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS17355 SM00448 cheY-homologous receiver domain CDO28_RS17360 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS17400 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS17475 SM01018 B12 binding domain CDO28_RS17535 SM00382 ATPases associated with a variety of cellular activities CDO28_RS17560 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS17560 SM01080 CDO28_RS17560 CDO28_RS17575 SM00833 Cobalamin synthesis protein cobW C-terminal domain CDO28_RS17595 SM01012 CDO28_RS17595 CDO28_RS17620 SM00382 ATPases associated with a variety of cellular activities CDO28_RS17670 SM00825 Beta-ketoacyl synthase CDO28_RS17675 SM00829 Enoylreductase CDO28_RS17700 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS17710 SM01350 CDO28_RS17710 CDO28_RS17720 SM00354 helix_turn _helix lactose operon repressor CDO28_RS17740 SM00382 ATPases associated with a variety of cellular activities CDO28_RS17805 SM00382 ATPases associated with a variety of cellular activities CDO28_RS17875 SM01130 CDO28_RS17875 CDO28_RS17880 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS17880 SM00895 CDO28_RS17880 CDO28_RS17970 SM00857 Resolvase, N terminal domain CDO28_RS18120 SM01230 CDO28_RS18120 CDO28_RS18275 SM00382 ATPases associated with a variety of cellular activities CDO28_RS18335 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS18405 SM00878 Biotin carboxylase C-terminal domain CDO28_RS18410 SM00796 Allophanate hydrolase subunit 1 CDO28_RS18410 SM00797 Allophanate hydrolase subunit 2 CDO28_RS18420 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS18420 SM00895 CDO28_RS18420 CDO28_RS18455 SM00382 ATPases associated with a variety of cellular activities CDO28_RS18545 SM00487 DEAD-like helicases superfamily CDO28_RS18545 SM00490 helicase superfamily c-terminal domain CDO28_RS18570 SM00357 Cold shock protein domain CDO28_RS18585 SM00271 DnaJ molecular chaperone homology domain CDO28_RS18595 SM00487 DEAD-like helicases superfamily CDO28_RS18595 SM00490 helicase superfamily c-terminal domain CDO28_RS18615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDO28_RS18615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS18615 SM01049 CDO28_RS18615 CDO28_RS18620 SM00280 Kazal type serine protease inhibitors CDO28_RS18650 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS18655 SM00382 ATPases associated with a variety of cellular activities CDO28_RS18690 SM00387 Histidine kinase-like ATPases CDO28_RS18690 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS18695 SM00318 Staphylococcal nuclease homologues CDO28_RS18700 SM00986 Uracil DNA glycosylase superfamily CDO28_RS18700 SM00987 UreE urease accessory protein, C-terminal domain CDO28_RS18705 SM00344 helix_turn_helix ASNC type CDO28_RS18720 SM00028 Tetratricopeptide repeats CDO28_RS18750 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS18750 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CDO28_RS18780 SM00729 Elongator protein 3, MiaB family, Radical SAM CDO28_RS18790 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS18960 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS18980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS18995 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS19000 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDO28_RS19135 SM00052 Putative diguanylate phosphodiesterase CDO28_RS19145 SM00869 Autotransporter beta-domain CDO28_RS19235 SM01007 Class II Aldolase and Adducin N-terminal domain CDO28_RS19290 SM00382 ATPases associated with a variety of cellular activities CDO28_RS19475 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS19485 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDO28_RS19505 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS19505 SM00895 CDO28_RS19505 CDO28_RS19585 SM00822 CDO28_RS19585 CDO28_RS19625 SM00382 ATPases associated with a variety of cellular activities CDO28_RS19625 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS19705 SM00382 ATPases associated with a variety of cellular activities CDO28_RS19715 SM00631 CDO28_RS19715 CDO28_RS19760 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS19785 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS19800 SM00382 ATPases associated with a variety of cellular activities CDO28_RS19860 SM00226 Low molecular weight phosphatase family CDO28_RS19865 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS19920 SM00382 ATPases associated with a variety of cellular activities CDO28_RS19965 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS19965 SM00866 CDO28_RS19965 CDO28_RS19995 SM00382 ATPases associated with a variety of cellular activities CDO28_RS20030 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS20040 SM00387 Histidine kinase-like ATPases CDO28_RS20040 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS20050 SM00448 cheY-homologous receiver domain CDO28_RS20050 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS20070 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS20135 SM00822 CDO28_RS20135 CDO28_RS20135 SM00825 Beta-ketoacyl synthase CDO28_RS20135 SM00826 CDO28_RS20135 CDO28_RS20135 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CDO28_RS20160 SM01043 Bacterial transcriptional activator domain CDO28_RS20220 SM00901 CDO28_RS20220 CDO28_RS20310 SM00953 CDO28_RS20310 CDO28_RS20370 SM00287 Bacterial SH3 domain homologues CDO28_RS20375 SM00267 diguanylate cyclase CDO28_RS20400 SM00382 ATPases associated with a variety of cellular activities CDO28_RS20435 SM00448 cheY-homologous receiver domain CDO28_RS20435 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS20440 SM00387 Histidine kinase-like ATPases CDO28_RS20440 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS20490 SM01006 Siderophore biosynthesis protein domain CDO28_RS20505 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS20515 SM01006 Siderophore biosynthesis protein domain CDO28_RS20525 SM00822 CDO28_RS20525 CDO28_RS20550 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDO28_RS20555 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS20575 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS20595 SM00382 ATPases associated with a variety of cellular activities CDO28_RS20640 SM00829 Enoylreductase CDO28_RS20645 SM00382 ATPases associated with a variety of cellular activities CDO28_RS20665 SM00470 ParB-like nuclease domain CDO28_RS20685 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDO28_RS20715 SM00671 Sel1-like repeats. CDO28_RS20740 SM00448 cheY-homologous receiver domain CDO28_RS20760 SM00460 Transglutaminase/protease-like homologues CDO28_RS20780 SM00235 Zinc-dependent metalloprotease CDO28_RS20785 SM00382 ATPases associated with a variety of cellular activities CDO28_RS20795 SM00829 Enoylreductase CDO28_RS20805 SM01057 Eukaryotic-type carbonic anhydrase CDO28_RS20830 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CDO28_RS20850 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS20850 SM00895 CDO28_RS20850 CDO28_RS20855 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS20855 SM00895 CDO28_RS20855 CDO28_RS20860 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CDO28_RS20865 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS20865 SM00895 CDO28_RS20865 CDO28_RS20880 SM00382 ATPases associated with a variety of cellular activities CDO28_RS20885 SM00822 CDO28_RS20885 CDO28_RS20895 SM00354 helix_turn _helix lactose operon repressor CDO28_RS20910 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS20910 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CDO28_RS20915 SM00382 ATPases associated with a variety of cellular activities CDO28_RS20975 SM00382 ATPases associated with a variety of cellular activities CDO28_RS20980 SM00382 ATPases associated with a variety of cellular activities CDO28_RS21000 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDO28_RS21000 SM00091 PAS domain CDO28_RS21000 SM00911 HWE histidine kinase CDO28_RS21005 SM00448 cheY-homologous receiver domain CDO28_RS21010 SM00267 diguanylate cyclase CDO28_RS21015 SM00271 DnaJ molecular chaperone homology domain CDO28_RS21045 SM00883 Chaperonin 10 Kd subunit CDO28_RS21050 SM00357 Cold shock protein domain CDO28_RS21085 SM00052 Putative diguanylate phosphodiesterase CDO28_RS21085 SM00267 diguanylate cyclase CDO28_RS21150 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS21150 SM00895 CDO28_RS21150 CDO28_RS21165 SM00028 Tetratricopeptide repeats CDO28_RS21170 SM00650 Ribosomal RNA adenine dimethylases CDO28_RS21215 SM00357 Cold shock protein domain CDO28_RS21250 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS21275 SM00382 ATPases associated with a variety of cellular activities CDO28_RS21285 SM00387 Histidine kinase-like ATPases CDO28_RS21290 SM00448 cheY-homologous receiver domain CDO28_RS21315 SM00382 ATPases associated with a variety of cellular activities CDO28_RS21335 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS21335 SM00895 CDO28_RS21335 CDO28_RS21355 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDO28_RS21400 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS21400 SM00895 CDO28_RS21400 CDO28_RS21430 SM00479 CDO28_RS21430 CDO28_RS21465 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS21465 SM00895 CDO28_RS21465 CDO28_RS21470 SM00382 ATPases associated with a variety of cellular activities CDO28_RS21515 SM00422 helix_turn_helix, mercury resistance CDO28_RS21555 SM00448 cheY-homologous receiver domain CDO28_RS21575 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS21590 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS21625 SM00850 LytTr DNA-binding domain CDO28_RS21705 SM00883 Chaperonin 10 Kd subunit CDO28_RS21715 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDO28_RS21725 SM00382 ATPases associated with a variety of cellular activities CDO28_RS21745 SM00382 ATPases associated with a variety of cellular activities CDO28_RS21795 SM00354 helix_turn _helix lactose operon repressor CDO28_RS21805 SM00849 Metallo-beta-lactamase superfamily CDO28_RS21880 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS21905 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS21930 SM00448 cheY-homologous receiver domain CDO28_RS21935 SM00911 HWE histidine kinase CDO28_RS21940 SM00382 ATPases associated with a variety of cellular activities CDO28_RS21955 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS21955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS21960 SM00382 ATPases associated with a variety of cellular activities CDO28_RS22045 SM01130 CDO28_RS22045 CDO28_RS22050 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CDO28_RS22070 SM00382 ATPases associated with a variety of cellular activities CDO28_RS22085 SM00346 helix_turn_helix isocitrate lyase regulation CDO28_RS22120 SM00420 helix_turn_helix, Deoxyribose operon repressor CDO28_RS22120 SM01134 CDO28_RS22120 CDO28_RS22235 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS22295 SM01130 CDO28_RS22295 CDO28_RS22335 SM00859 Semialdehyde dehydrogenase, NAD binding domain CDO28_RS22350 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDO28_RS22375 SM00883 Chaperonin 10 Kd subunit CDO28_RS22395 SM00382 ATPases associated with a variety of cellular activities CDO28_RS22415 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CDO28_RS22525 SM00421 helix_turn_helix, Lux Regulon CDO28_RS22555 SM00091 PAS domain CDO28_RS22555 SM00387 Histidine kinase-like ATPases CDO28_RS22555 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS22560 SM00421 helix_turn_helix, Lux Regulon CDO28_RS22560 SM00448 cheY-homologous receiver domain CDO28_RS22570 SM00100 Cyclic nucleotide-monophosphate binding domain CDO28_RS22570 SM00419 helix_turn_helix, cAMP Regulatory protein CDO28_RS22620 SM00100 Cyclic nucleotide-monophosphate binding domain CDO28_RS22620 SM00419 helix_turn_helix, cAMP Regulatory protein CDO28_RS22670 SM00382 ATPases associated with a variety of cellular activities CDO28_RS22675 SM00382 ATPases associated with a variety of cellular activities CDO28_RS22735 SM00903 Flavin reductase like domain CDO28_RS22740 SM00387 Histidine kinase-like ATPases CDO28_RS22740 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS22745 SM00421 helix_turn_helix, Lux Regulon CDO28_RS22745 SM00448 cheY-homologous receiver domain CDO28_RS22755 SM00100 Cyclic nucleotide-monophosphate binding domain CDO28_RS22755 SM00419 helix_turn_helix, cAMP Regulatory protein CDO28_RS22790 SM01266 CDO28_RS22790 CDO28_RS22820 SM00357 Cold shock protein domain CDO28_RS22860 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS22860 SM00895 CDO28_RS22860 CDO28_RS22880 SM00903 Flavin reductase like domain CDO28_RS22915 SM00382 ATPases associated with a variety of cellular activities CDO28_RS22955 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDO28_RS22955 SM00382 ATPases associated with a variety of cellular activities CDO28_RS22970 SM00893 Electron transfer flavoprotein domain CDO28_RS22975 SM00893 Electron transfer flavoprotein domain CDO28_RS23105 SM00825 Beta-ketoacyl synthase CDO28_RS23110 SM00822 CDO28_RS23110 CDO28_RS23145 SM00382 ATPases associated with a variety of cellular activities CDO28_RS23235 SM00481 DNA polymerase alpha chain like domain CDO28_RS23375 SM00387 Histidine kinase-like ATPases CDO28_RS23375 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS23380 SM00421 helix_turn_helix, Lux Regulon CDO28_RS23380 SM00448 cheY-homologous receiver domain CDO28_RS23385 SM00448 cheY-homologous receiver domain CDO28_RS23405 SM00854 Bacterial capsule synthesis protein PGA_cap CDO28_RS23410 SM00382 ATPases associated with a variety of cellular activities CDO28_RS23455 SM00421 helix_turn_helix, Lux Regulon CDO28_RS23490 SM00421 helix_turn_helix, Lux Regulon CDO28_RS23525 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS23620 SM00382 ATPases associated with a variety of cellular activities CDO28_RS23625 SM00822 CDO28_RS23625 CDO28_RS23630 SM00849 Metallo-beta-lactamase superfamily CDO28_RS23640 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS23670 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS23675 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDO28_RS23700 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS23795 SM00947 Carbonic anhydrase CDO28_RS23805 SM00448 cheY-homologous receiver domain CDO28_RS23805 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS23810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS23810 SM00387 Histidine kinase-like ATPases CDO28_RS23810 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS23830 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS23855 SM00829 Enoylreductase CDO28_RS23870 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS23885 SM00849 Metallo-beta-lactamase superfamily CDO28_RS23900 SM00829 Enoylreductase CDO28_RS23905 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS23965 SM00710 Parallel beta-helix repeats CDO28_RS23980 SM00966 SpoVT / AbrB like domain CDO28_RS24040 SM00822 CDO28_RS24040 CDO28_RS24070 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDO28_RS24100 SM00382 ATPases associated with a variety of cellular activities CDO28_RS24140 SM00382 ATPases associated with a variety of cellular activities CDO28_RS24235 SM00382 ATPases associated with a variety of cellular activities CDO28_RS24240 SM00382 ATPases associated with a variety of cellular activities CDO28_RS24250 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS24250 SM00895 CDO28_RS24250 CDO28_RS24255 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CDO28_RS24325 SM00382 ATPases associated with a variety of cellular activities CDO28_RS24330 SM00382 ATPases associated with a variety of cellular activities CDO28_RS24385 SM00893 Electron transfer flavoprotein domain CDO28_RS24390 SM00893 Electron transfer flavoprotein domain CDO28_RS24405 SM00822 CDO28_RS24405 CDO28_RS24430 SM00882 Coenzyme A transferase CDO28_RS24470 SM00382 ATPases associated with a variety of cellular activities CDO28_RS24500 SM00382 ATPases associated with a variety of cellular activities CDO28_RS24520 SM01130 CDO28_RS24520 CDO28_RS24525 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS24525 SM00895 CDO28_RS24525 CDO28_RS24550 SM00822 CDO28_RS24550 CDO28_RS24555 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS24575 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CDO28_RS24590 SM00382 ATPases associated with a variety of cellular activities CDO28_RS24610 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS24640 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS24685 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS24685 SM00895 CDO28_RS24685 CDO28_RS24695 SM00382 ATPases associated with a variety of cellular activities CDO28_RS24725 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS24730 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDO28_RS24730 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDO28_RS24735 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDO28_RS24805 SM00052 Putative diguanylate phosphodiesterase CDO28_RS24805 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDO28_RS24805 SM00091 PAS domain CDO28_RS24805 SM00267 diguanylate cyclase CDO28_RS24810 SM00421 helix_turn_helix, Lux Regulon CDO28_RS24810 SM00448 cheY-homologous receiver domain CDO28_RS24815 SM00138 Methyltransferase, chemotaxis proteins CDO28_RS24820 SM00260 Two component signalling adaptor domain CDO28_RS24825 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). CDO28_RS24825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS24830 SM00073 Histidine Phosphotransfer domain CDO28_RS24830 SM00260 Two component signalling adaptor domain CDO28_RS24830 SM00387 Histidine kinase-like ATPases CDO28_RS24830 SM00448 cheY-homologous receiver domain CDO28_RS24830 SM01231 CDO28_RS24830 CDO28_RS24870 SM00858 CDO28_RS24870 CDO28_RS24895 SM00028 Tetratricopeptide repeats CDO28_RS24940 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS24940 SM00454 Sterile alpha motif. CDO28_RS25135 SM00028 Tetratricopeptide repeats CDO28_RS25150 SM00387 Histidine kinase-like ATPases CDO28_RS25150 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS25155 SM00421 helix_turn_helix, Lux Regulon CDO28_RS25155 SM00448 cheY-homologous receiver domain CDO28_RS25160 SM00448 cheY-homologous receiver domain CDO28_RS25260 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS25325 SM00382 ATPases associated with a variety of cellular activities CDO28_RS25350 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS25375 SM00382 ATPases associated with a variety of cellular activities CDO28_RS25390 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS25390 SM00895 CDO28_RS25390 CDO28_RS25470 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS25470 SM00454 Sterile alpha motif. CDO28_RS25550 SM00849 Metallo-beta-lactamase superfamily CDO28_RS25580 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS25585 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS25590 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS25645 SM01329 CDO28_RS25645 CDO28_RS25695 SM00382 ATPases associated with a variety of cellular activities CDO28_RS25700 SM00344 helix_turn_helix ASNC type CDO28_RS25745 SM00382 ATPases associated with a variety of cellular activities CDO28_RS25775 SM00382 ATPases associated with a variety of cellular activities CDO28_RS25930 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS26030 SM00318 Staphylococcal nuclease homologues CDO28_RS26105 SM00641 Glycosyl hydrolases family 25 CDO28_RS26130 SM00382 ATPases associated with a variety of cellular activities CDO28_RS26135 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS26160 SM00346 helix_turn_helix isocitrate lyase regulation CDO28_RS26180 SM00382 ATPases associated with a variety of cellular activities CDO28_RS26185 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CDO28_RS26215 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CDO28_RS26225 SM00448 cheY-homologous receiver domain CDO28_RS26225 SM01012 CDO28_RS26225 CDO28_RS26235 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS26270 SM00878 Biotin carboxylase C-terminal domain CDO28_RS26290 SM00953 CDO28_RS26290 CDO28_RS26300 SM00382 ATPases associated with a variety of cellular activities CDO28_RS26320 SM01119 CDO28_RS26320 CDO28_RS26325 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS26340 SM00382 ATPases associated with a variety of cellular activities CDO28_RS26350 SM00346 helix_turn_helix isocitrate lyase regulation CDO28_RS26355 SM00382 ATPases associated with a variety of cellular activities CDO28_RS26545 SM00849 Metallo-beta-lactamase superfamily CDO28_RS26555 SM00984 UDP binding domain CDO28_RS26570 SM00382 ATPases associated with a variety of cellular activities CDO28_RS26615 SM00100 Cyclic nucleotide-monophosphate binding domain CDO28_RS26625 SM00354 helix_turn _helix lactose operon repressor CDO28_RS26645 SM00382 ATPases associated with a variety of cellular activities CDO28_RS26695 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDO28_RS26700 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS26715 SM00829 Enoylreductase CDO28_RS26755 SM00223 APPLE domain CDO28_RS26755 SM01359 CDO28_RS26755 CDO28_RS26755 SM01360 CDO28_RS26755 CDO28_RS26760 SM00420 helix_turn_helix, Deoxyribose operon repressor CDO28_RS26760 SM01134 CDO28_RS26760 CDO28_RS26765 SM01133 CDO28_RS26765 CDO28_RS26805 SM00382 ATPases associated with a variety of cellular activities CDO28_RS26835 SM00382 ATPases associated with a variety of cellular activities CDO28_RS26920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS26925 SM00072 Guanylate kinase homologues. CDO28_RS26960 SM00382 ATPases associated with a variety of cellular activities CDO28_RS26990 SM00387 Histidine kinase-like ATPases CDO28_RS27010 SM00422 helix_turn_helix, mercury resistance CDO28_RS27010 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS27030 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27055 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27060 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27060 SM00448 cheY-homologous receiver domain CDO28_RS27065 SM00387 Histidine kinase-like ATPases CDO28_RS27065 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS27095 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS27110 SM00387 Histidine kinase-like ATPases CDO28_RS27110 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS27115 SM00448 cheY-homologous receiver domain CDO28_RS27115 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS27195 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27200 SM00347 helix_turn_helix multiple antibiotic resistance protein CDO28_RS27275 SM00749 bacterial OsmY and nodulation domain CDO28_RS27295 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS27305 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDO28_RS27310 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS27330 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27340 SM00354 helix_turn _helix lactose operon repressor CDO28_RS27360 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS27360 SM00895 CDO28_RS27360 CDO28_RS27480 SM00354 helix_turn _helix lactose operon repressor CDO28_RS27500 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27535 SM00822 CDO28_RS27535 CDO28_RS27545 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS27550 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS27555 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS27560 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27595 SM00420 helix_turn_helix, Deoxyribose operon repressor CDO28_RS27595 SM01134 CDO28_RS27595 CDO28_RS27640 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27660 SM00448 cheY-homologous receiver domain CDO28_RS27660 SM00850 LytTr DNA-binding domain CDO28_RS27675 SM00869 Autotransporter beta-domain CDO28_RS27680 SM00450 Rhodanese Homology Domain CDO28_RS27715 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS27720 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDO28_RS27730 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS27735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS27735 SM00387 Histidine kinase-like ATPases CDO28_RS27735 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS27740 SM00448 cheY-homologous receiver domain CDO28_RS27740 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS27770 SM00883 Chaperonin 10 Kd subunit CDO28_RS27805 SM00387 Histidine kinase-like ATPases CDO28_RS27815 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS27840 SM00422 helix_turn_helix, mercury resistance CDO28_RS27870 SM01154 CDO28_RS27870 CDO28_RS27885 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27900 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS27900 SM00895 CDO28_RS27900 CDO28_RS27905 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27935 SM00354 helix_turn _helix lactose operon repressor CDO28_RS27950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS27970 SM00382 ATPases associated with a variety of cellular activities CDO28_RS27975 SM00813 Alpha-L-arabinofuranosidase C-terminus CDO28_RS27985 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS28000 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CDO28_RS28000 SM00245 tail specific protease CDO28_RS28010 SM00382 ATPases associated with a variety of cellular activities CDO28_RS28025 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CDO28_RS28025 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDO28_RS28025 SM00091 PAS domain CDO28_RS28025 SM00911 HWE histidine kinase CDO28_RS28030 SM00448 cheY-homologous receiver domain CDO28_RS28035 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS28070 SM00382 ATPases associated with a variety of cellular activities CDO28_RS28130 SM00318 Staphylococcal nuclease homologues CDO28_RS28210 SM00354 helix_turn _helix lactose operon repressor CDO28_RS28235 SM00382 ATPases associated with a variety of cellular activities CDO28_RS28255 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS28260 SM00354 helix_turn _helix lactose operon repressor CDO28_RS28305 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CDO28_RS28325 SM00244 prohibitin homologues CDO28_RS28430 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS28445 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDO28_RS28455 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS28500 SM00829 Enoylreductase CDO28_RS28510 SM00382 ATPases associated with a variety of cellular activities CDO28_RS28530 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS28570 SM00849 Metallo-beta-lactamase superfamily CDO28_RS28580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDO28_RS28580 SM00091 PAS domain CDO28_RS28580 SM00387 Histidine kinase-like ATPases CDO28_RS28580 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS28585 SM00448 cheY-homologous receiver domain CDO28_RS28590 SM00421 helix_turn_helix, Lux Regulon CDO28_RS28590 SM00448 cheY-homologous receiver domain CDO28_RS28600 SM00822 CDO28_RS28600 CDO28_RS28650 SM00487 DEAD-like helicases superfamily CDO28_RS28650 SM00490 helicase superfamily c-terminal domain CDO28_RS28690 SM00460 Transglutaminase/protease-like homologues CDO28_RS28720 SM00382 ATPases associated with a variety of cellular activities CDO28_RS28755 SM00052 Putative diguanylate phosphodiesterase CDO28_RS28755 SM00267 diguanylate cyclase CDO28_RS28775 SM00382 ATPases associated with a variety of cellular activities CDO28_RS28875 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CDO28_RS28880 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CDO28_RS28940 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS28960 SM00382 ATPases associated with a variety of cellular activities CDO28_RS28970 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CDO28_RS28995 SM00382 ATPases associated with a variety of cellular activities CDO28_RS29060 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS29075 SM00749 bacterial OsmY and nodulation domain CDO28_RS29090 SM00642 Alpha-amylase domain CDO28_RS29095 SM00642 Alpha-amylase domain CDO28_RS29100 SM00986 Uracil DNA glycosylase superfamily CDO28_RS29100 SM00987 UreE urease accessory protein, C-terminal domain CDO28_RS29160 SM00382 ATPases associated with a variety of cellular activities CDO28_RS29180 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS29180 SM00866 CDO28_RS29180 CDO28_RS29190 SM00382 ATPases associated with a variety of cellular activities CDO28_RS29270 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS29350 SM00344 helix_turn_helix ASNC type CDO28_RS29430 SM01130 CDO28_RS29430 CDO28_RS29480 SM00052 Putative diguanylate phosphodiesterase CDO28_RS29490 SM00387 Histidine kinase-like ATPases CDO28_RS29495 SM00421 helix_turn_helix, Lux Regulon CDO28_RS29495 SM00448 cheY-homologous receiver domain CDO28_RS29600 SM00382 ATPases associated with a variety of cellular activities CDO28_RS29615 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS29615 SM00895 CDO28_RS29615 CDO28_RS29625 SM01007 Class II Aldolase and Adducin N-terminal domain CDO28_RS29630 SM00354 helix_turn _helix lactose operon repressor CDO28_RS29660 SM00382 ATPases associated with a variety of cellular activities CDO28_RS29665 SM00354 helix_turn _helix lactose operon repressor CDO28_RS29705 SM00346 helix_turn_helix isocitrate lyase regulation CDO28_RS29725 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen CDO28_RS29730 SM00028 Tetratricopeptide repeats CDO28_RS29755 SM00822 CDO28_RS29755 CDO28_RS29805 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS29825 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS29830 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS29860 SM00382 ATPases associated with a variety of cellular activities CDO28_RS29880 SM00354 helix_turn _helix lactose operon repressor CDO28_RS29885 SM00382 ATPases associated with a variety of cellular activities CDO28_RS29900 SM00387 Histidine kinase-like ATPases CDO28_RS29900 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS29905 SM00448 cheY-homologous receiver domain CDO28_RS29905 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS29950 SM01230 CDO28_RS29950 CDO28_RS29975 SM00822 CDO28_RS29975 CDO28_RS29995 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS30005 SM00878 Biotin carboxylase C-terminal domain CDO28_RS30015 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS30015 SM00866 CDO28_RS30015 CDO28_RS30040 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30045 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30055 SM01120 CDO28_RS30055 CDO28_RS30085 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS30085 SM00895 CDO28_RS30085 CDO28_RS30095 SM00028 Tetratricopeptide repeats CDO28_RS30100 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS30100 SM01080 CDO28_RS30100 CDO28_RS30105 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30110 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30130 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30155 SM00642 Alpha-amylase domain CDO28_RS30215 SM00346 helix_turn_helix isocitrate lyase regulation CDO28_RS30220 SM00882 Coenzyme A transferase CDO28_RS30225 SM00882 Coenzyme A transferase CDO28_RS30255 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30255 SM00843 CDO28_RS30255 CDO28_RS30275 SM00470 ParB-like nuclease domain CDO28_RS30285 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30290 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30320 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CDO28_RS30335 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS30335 SM00454 Sterile alpha motif. CDO28_RS30340 SM00387 Histidine kinase-like ATPases CDO28_RS30340 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS30340 SM00448 cheY-homologous receiver domain CDO28_RS30345 SM00421 helix_turn_helix, Lux Regulon CDO28_RS30345 SM00448 cheY-homologous receiver domain CDO28_RS30355 SM00387 Histidine kinase-like ATPases CDO28_RS30355 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS30360 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30360 SM00448 cheY-homologous receiver domain CDO28_RS30400 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS30420 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30445 SM00354 helix_turn _helix lactose operon repressor CDO28_RS30520 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30545 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS30550 SM00354 helix_turn _helix lactose operon repressor CDO28_RS30610 SM01060 CDO28_RS30610 CDO28_RS30645 SM00354 helix_turn _helix lactose operon repressor CDO28_RS30660 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30680 SM00861 Transketolase, pyrimidine binding domain CDO28_RS30685 SM00344 helix_turn_helix ASNC type CDO28_RS30710 SM00363 S4 RNA-binding domain CDO28_RS30790 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS30820 SM00470 ParB-like nuclease domain CDO28_RS30835 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS30835 SM00866 CDO28_RS30835 CDO28_RS30840 SM00838 Elongation factor G C-terminus CDO28_RS30840 SM00889 Elongation factor G, domain IV CDO28_RS30855 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS30875 SM00382 ATPases associated with a variety of cellular activities CDO28_RS30980 SM00421 helix_turn_helix, Lux Regulon CDO28_RS30980 SM00448 cheY-homologous receiver domain CDO28_RS30995 SM00829 Enoylreductase CDO28_RS31070 SM00155 Phospholipase D. Active site motifs. CDO28_RS31095 SM00642 Alpha-amylase domain CDO28_RS31110 SM00382 ATPases associated with a variety of cellular activities CDO28_RS31125 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS31125 SM00895 CDO28_RS31125 CDO28_RS31130 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS31130 SM00895 CDO28_RS31130 CDO28_RS31135 SM01130 CDO28_RS31135 CDO28_RS31155 SM00382 ATPases associated with a variety of cellular activities CDO28_RS31225 SM00382 ATPases associated with a variety of cellular activities CDO28_RS31250 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS31250 SM00895 CDO28_RS31250 CDO28_RS31255 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDO28_RS31265 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS31270 SM00833 Cobalamin synthesis protein cobW C-terminal domain CDO28_RS31305 SM01130 CDO28_RS31305 CDO28_RS31310 SM00382 ATPases associated with a variety of cellular activities CDO28_RS31345 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS31345 SM00895 CDO28_RS31345 CDO28_RS31375 SM00354 helix_turn _helix lactose operon repressor CDO28_RS31385 SM00382 ATPases associated with a variety of cellular activities CDO28_RS31420 SM00421 helix_turn_helix, Lux Regulon CDO28_RS31420 SM00448 cheY-homologous receiver domain CDO28_RS31425 SM00897 FIST N domain CDO28_RS31425 SM01204 CDO28_RS31425 CDO28_RS31430 SM00387 Histidine kinase-like ATPases CDO28_RS31430 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS31430 SM00448 cheY-homologous receiver domain CDO28_RS31450 SM00849 Metallo-beta-lactamase superfamily CDO28_RS31475 SM00564 beta-propeller repeat CDO28_RS31485 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS31505 SM00320 WD40 repeats CDO28_RS31525 SM00382 ATPases associated with a variety of cellular activities CDO28_RS31530 SM00382 ATPases associated with a variety of cellular activities CDO28_RS31555 SM00382 ATPases associated with a variety of cellular activities CDO28_RS31560 SM00961 Ribulose bisphosphate carboxylase, small chain CDO28_RS31575 SM00861 Transketolase, pyrimidine binding domain CDO28_RS31615 SM00729 Elongator protein 3, MiaB family, Radical SAM CDO28_RS31650 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS31665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS31665 SM00387 Histidine kinase-like ATPases CDO28_RS31665 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS31670 SM00448 cheY-homologous receiver domain CDO28_RS31670 SM00862 Transcriptional regulatory protein, C terminal CDO28_RS31700 SM00749 bacterial OsmY and nodulation domain CDO28_RS31725 SM00354 helix_turn _helix lactose operon repressor CDO28_RS31750 SM00382 ATPases associated with a variety of cellular activities CDO28_RS31805 SM00829 Enoylreductase CDO28_RS31825 SM00855 Phosphoglycerate mutase family CDO28_RS31860 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS31865 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS31865 SM00895 CDO28_RS31865 CDO28_RS31870 SM01130 CDO28_RS31870 CDO28_RS31890 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS31905 SM00382 ATPases associated with a variety of cellular activities CDO28_RS31985 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32030 SM00354 helix_turn _helix lactose operon repressor CDO28_RS32050 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS32050 SM00895 CDO28_RS32050 CDO28_RS32070 SM01130 CDO28_RS32070 CDO28_RS32075 SM01130 CDO28_RS32075 CDO28_RS32080 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS32100 SM01120 CDO28_RS32100 CDO28_RS32110 SM01120 CDO28_RS32110 CDO28_RS32130 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32165 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS32165 SM00895 CDO28_RS32165 CDO28_RS32170 SM00354 helix_turn _helix lactose operon repressor CDO28_RS32190 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32290 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS32300 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS32340 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32365 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS32365 SM00387 Histidine kinase-like ATPases CDO28_RS32365 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS32365 SM00448 cheY-homologous receiver domain CDO28_RS32370 SM00448 cheY-homologous receiver domain CDO28_RS32375 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CDO28_RS32375 SM00388 His Kinase A (phosphoacceptor) domain CDO28_RS32375 SM00448 cheY-homologous receiver domain CDO28_RS32400 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32415 SM00354 helix_turn _helix lactose operon repressor CDO28_RS32435 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32460 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS32460 SM00895 CDO28_RS32460 CDO28_RS32485 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32520 SM00346 helix_turn_helix isocitrate lyase regulation CDO28_RS32525 SM00829 Enoylreductase CDO28_RS32530 SM00267 diguanylate cyclase CDO28_RS32550 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS32550 SM00895 CDO28_RS32550 CDO28_RS32565 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS32570 SM01092 CO dehydrogenase flavoprotein C-terminal domain CDO28_RS32610 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDO28_RS32650 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32660 SM00829 Enoylreductase CDO28_RS32675 SM00344 helix_turn_helix ASNC type CDO28_RS32680 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS32685 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32690 SM00062 Bacterial periplasmic substrate-binding proteins CDO28_RS32735 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS32735 SM00895 CDO28_RS32735 CDO28_RS32765 SM00052 Putative diguanylate phosphodiesterase CDO28_RS32765 SM00267 diguanylate cyclase CDO28_RS32780 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CDO28_RS32780 SM00331 Sigma factor PP2C-like phosphatases CDO28_RS32810 SM00822 CDO28_RS32810 CDO28_RS32815 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS32885 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32890 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32895 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS32895 SM00895 CDO28_RS32895 CDO28_RS32910 SM00354 helix_turn _helix lactose operon repressor CDO28_RS32920 SM00382 ATPases associated with a variety of cellular activities CDO28_RS32945 SM01007 Class II Aldolase and Adducin N-terminal domain CDO28_RS32960 SM00822 CDO28_RS32960 CDO28_RS32965 SM00822 CDO28_RS32965 CDO28_RS32980 SM00028 Tetratricopeptide repeats CDO28_RS32995 SM01133 CDO28_RS32995 CDO28_RS33020 SM00382 ATPases associated with a variety of cellular activities CDO28_RS33040 SM00382 ATPases associated with a variety of cellular activities CDO28_RS33050 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS33050 SM00895 CDO28_RS33050 CDO28_RS33055 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CDO28_RS33060 SM00822 CDO28_RS33060 CDO28_RS33075 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CDO28_RS33075 SM00091 PAS domain CDO28_RS33075 SM00138 Methyltransferase, chemotaxis proteins CDO28_RS33075 SM00911 HWE histidine kinase CDO28_RS33145 SM01006 Siderophore biosynthesis protein domain CDO28_RS33165 SM00354 helix_turn _helix lactose operon repressor CDO28_RS33180 SM00028 Tetratricopeptide repeats CDO28_RS33360 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS33380 SM00382 ATPases associated with a variety of cellular activities CDO28_RS33400 SM00382 ATPases associated with a variety of cellular activities CDO28_RS33630 SM00421 helix_turn_helix, Lux Regulon CDO28_RS33635 SM00421 helix_turn_helix, Lux Regulon CDO28_RS33640 SM00421 helix_turn_helix, Lux Regulon CDO28_RS33665 SM00354 helix_turn _helix lactose operon repressor CDO28_RS33745 SM00116 Domain in cystathionine beta-synthase and other proteins. CDO28_RS33755 SM00382 ATPases associated with a variety of cellular activities CDO28_RS33770 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain CDO28_RS33825 SM01007 Class II Aldolase and Adducin N-terminal domain CDO28_RS33845 SM00382 ATPases associated with a variety of cellular activities CDO28_RS33960 SM00382 ATPases associated with a variety of cellular activities CDO28_RS34000 SM00470 ParB-like nuclease domain CDO28_RS34030 SM00318 Staphylococcal nuclease homologues CDO28_RS34120 SM00710 Parallel beta-helix repeats CDO28_RS34130 SM00342 helix_turn_helix, arabinose operon control protein CDO28_RS34135 SM00267 diguanylate cyclase CDO28_RS34175 SM00357 Cold shock protein domain CDO28_RS34190 SM00345 helix_turn_helix gluconate operon transcriptional repressor CDO28_RS34200 SM00873 B3/4 domain CDO28_RS34240 SM00318 Staphylococcal nuclease homologues CDO28_RS34370 SM00830 Chorismate mutase type II CDO28_RS34385 SM00823 Phosphopantetheine attachment site CDO28_RS34485 SM00382 ATPases associated with a variety of cellular activities CDO28_RS34520 SM00382 ATPases associated with a variety of cellular activities CDO28_RS34535 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS34575 SM00530 Helix-turn-helix XRE-family like proteins CDO28_RS34590 SM00448 cheY-homologous receiver domain