locus-tag class description CJD35_RS00030 PF08125 Mannitol dehydrogenase C-terminal domain CJD35_RS00030 PF01232 Mannitol dehydrogenase Rossmann domain CJD35_RS00035 PF02614 Glucuronate isomerase CJD35_RS00040 PF07690 Major Facilitator Superfamily CJD35_RS00045 PF00356 Bacterial regulatory proteins, lacI family CJD35_RS00050 PF00206 Lyase CJD35_RS00050 PF10397 Adenylosuccinate lyase C-terminus CJD35_RS00065 PF00083 Sugar (and other) transporter CJD35_RS00080 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CJD35_RS00095 PF01103 Surface antigen CJD35_RS00095 PF17243 POTRA domain TamA domain 1 CJD35_RS00120 PF01258 Prokaryotic dksA/traR C4-type zinc finger CJD35_RS00140 PF02403 Seryl-tRNA synthetase N-terminal domain CJD35_RS00140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJD35_RS00145 PF01975 Survival protein SurE CJD35_RS00150 PF01551 Peptidase family M23 CJD35_RS00150 PF01476 LysM domain CJD35_RS00155 PF02254 TrkA-N domain CJD35_RS00155 PF07885 Ion channel CJD35_RS00160 PF18693 TRAM domain CJD35_RS00160 PF04055 Radical SAM superfamily CJD35_RS00160 PF00919 Uncharacterized protein family UPF0004 CJD35_RS00175 PF02789 Cytosol aminopeptidase family, N-terminal domain CJD35_RS00175 PF00883 Cytosol aminopeptidase family, catalytic domain CJD35_RS00185 PF00877 NlpC/P60 family CJD35_RS00190 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJD35_RS00200 PF07995 Glucose / Sorbosone dehydrogenase CJD35_RS00210 PF01300 Telomere recombination CJD35_RS00210 PF03481 Putative GTP-binding controlling metal-binding CJD35_RS00220 PF01625 Peptide methionine sulfoxide reductase CJD35_RS00225 PF13193 AMP-binding enzyme C-terminal domain CJD35_RS00225 PF00501 AMP-binding enzyme CJD35_RS00235 PF13439 Glycosyltransferase Family 4 CJD35_RS00235 PF00534 Glycosyl transferases group 1 CJD35_RS00245 PF00107 Zinc-binding dehydrogenase CJD35_RS00245 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS00255 PF02861 Clp amino terminal domain, pathogenicity island component CJD35_RS00255 PF00004 ATPase family associated with various cellular activities (AAA) CJD35_RS00255 PF07724 AAA domain (Cdc48 subfamily) CJD35_RS00255 PF17871 AAA lid domain CJD35_RS00255 PF10431 C-terminal, D2-small domain, of ClpB protein CJD35_RS00270 PF00043 Glutathione S-transferase, C-terminal domain CJD35_RS00270 PF02798 Glutathione S-transferase, N-terminal domain CJD35_RS00275 PF01027 Inhibitor of apoptosis-promoting Bax1 CJD35_RS00285 PF00080 Copper/zinc superoxide dismutase (SODC) CJD35_RS00290 PF00691 OmpA family CJD35_RS00380 PF04860 Phage portal protein CJD35_RS00400 PF01483 Proprotein convertase P-domain CJD35_RS00400 PF04389 Peptidase family M28 CJD35_RS00435 PF02773 S-adenosylmethionine synthetase, C-terminal domain CJD35_RS00435 PF02772 S-adenosylmethionine synthetase, central domain CJD35_RS00435 PF00438 S-adenosylmethionine synthetase, N-terminal domain CJD35_RS00450 PF02390 Putative methyltransferase CJD35_RS00455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS00455 PF12806 Acetyl-CoA dehydrogenase C-terminal like CJD35_RS00455 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS00455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS00475 PF00155 Aminotransferase class I and II CJD35_RS00485 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CJD35_RS00485 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CJD35_RS00490 PF00920 Dehydratase family CJD35_RS00495 PF02685 Glucokinase CJD35_RS00500 PF01081 KDPG and KHG aldolase CJD35_RS00510 PF00132 Bacterial transferase hexapeptide (six repeats) CJD35_RS00515 PF00490 Delta-aminolevulinic acid dehydratase CJD35_RS00520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJD35_RS00540 PF05173 Dihydrodipicolinate reductase, C-terminus CJD35_RS00540 PF01113 Dihydrodipicolinate reductase, N-terminus CJD35_RS00545 PF00633 Helix-hairpin-helix motif CJD35_RS00545 PF10576 Iron-sulfur binding domain of endonuclease III CJD35_RS00545 PF00730 HhH-GPD superfamily base excision DNA repair protein CJD35_RS00560 PF00528 Binding-protein-dependent transport system inner membrane component CJD35_RS00565 PF03459 TOBE domain CJD35_RS00565 PF00005 ABC transporter CJD35_RS00575 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJD35_RS00575 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJD35_RS00580 PF02321 Outer membrane efflux protein CJD35_RS00585 PF00873 AcrB/AcrD/AcrF family CJD35_RS00590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJD35_RS00590 PF00529 HlyD membrane-fusion protein of T1SS CJD35_RS00600 PF05193 Peptidase M16 inactive domain CJD35_RS00600 PF00675 Insulinase (Peptidase family M16) CJD35_RS00605 PF00270 DEAD/DEAH box helicase CJD35_RS00605 PF00271 Helicase conserved C-terminal domain CJD35_RS00620 PF00814 Glycoprotease family CJD35_RS00625 PF00814 Glycoprotease family CJD35_RS00625 PF00583 Acetyltransferase (GNAT) family CJD35_RS00630 PF05443 ROS/MUCR transcriptional regulator protein CJD35_RS00635 PF01475 Ferric uptake regulator family CJD35_RS00645 PF04055 Radical SAM superfamily CJD35_RS00645 PF01938 TRAM domain CJD35_RS00645 PF00919 Uncharacterized protein family UPF0004 CJD35_RS00650 PF02562 PhoH-like protein CJD35_RS00655 PF02130 Uncharacterized protein family UPF0054 CJD35_RS00660 PF03471 Transporter associated domain CJD35_RS00660 PF00571 CBS domain CJD35_RS00665 PF10090 Histidine phosphotransferase C-terminal domain CJD35_RS00675 PF00849 RNA pseudouridylate synthase CJD35_RS00680 PF00140 Sigma-70 factor, region 1.2 CJD35_RS00680 PF04545 Sigma-70, region 4 CJD35_RS00680 PF04542 Sigma-70 region 2 CJD35_RS00690 PF00912 Transglycosylase CJD35_RS00695 PF00593 TonB dependent receptor CJD35_RS00700 PF10431 C-terminal, D2-small domain, of ClpB protein CJD35_RS00700 PF06689 ClpX C4-type zinc finger CJD35_RS00700 PF07724 AAA domain (Cdc48 subfamily) CJD35_RS00705 PF00574 Clp protease CJD35_RS00715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJD35_RS00715 PF05697 Bacterial trigger factor protein (TF) CJD35_RS00715 PF05698 Bacterial trigger factor protein (TF) C-terminus CJD35_RS00740 PF02146 Sir2 family CJD35_RS00745 PF00909 Ammonium Transporter Family CJD35_RS00755 PF00083 Sugar (and other) transporter CJD35_RS00755 PF07690 Major Facilitator Superfamily CJD35_RS00760 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJD35_RS00760 PF06481 COX Aromatic Rich Motif CJD35_RS00770 PF00510 Cytochrome c oxidase subunit III CJD35_RS00775 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CJD35_RS00785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS00785 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS00790 PF00072 Response regulator receiver domain CJD35_RS00805 PF00294 pfkB family carbohydrate kinase CJD35_RS00810 PF00072 Response regulator receiver domain CJD35_RS00810 PF13426 PAS domain CJD35_RS00810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS00815 PF12697 Alpha/beta hydrolase family CJD35_RS00835 PF00132 Bacterial transferase hexapeptide (six repeats) CJD35_RS00840 PF01925 Sulfite exporter TauE/SafE CJD35_RS00845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS00845 PF03466 LysR substrate binding domain CJD35_RS00860 PF01066 CDP-alcohol phosphatidyltransferase CJD35_RS00875 PF00905 Penicillin binding protein transpeptidase domain CJD35_RS00875 PF00912 Transglycosylase CJD35_RS00875 PF17092 Penicillin-binding protein OB-like domain CJD35_RS00885 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CJD35_RS00895 PF00999 Sodium/hydrogen exchanger family CJD35_RS00895 PF02254 TrkA-N domain CJD35_RS00900 PF04241 Protein of unknown function (DUF423) CJD35_RS00910 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CJD35_RS00910 PF02779 Transketolase, pyrimidine binding domain CJD35_RS00910 PF02780 Transketolase, C-terminal domain CJD35_RS00920 PF01252 Signal peptidase (SPase) II CJD35_RS00925 PF08264 Anticodon-binding domain of tRNA CJD35_RS00925 PF00133 tRNA synthetases class I (I, L, M and V) CJD35_RS00930 PF06574 FAD synthetase CJD35_RS00930 PF01687 Riboflavin kinase CJD35_RS00935 PF00561 alpha/beta hydrolase fold CJD35_RS00940 PF00186 Dihydrofolate reductase CJD35_RS00945 PF02222 ATP-grasp domain CJD35_RS00945 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CJD35_RS00950 PF00731 AIR carboxylase CJD35_RS00955 PF00300 Histidine phosphatase superfamily (branch 1) CJD35_RS00960 PF01343 Peptidase family S49 CJD35_RS00965 PF03458 UPF0126 domain CJD35_RS00975 PF00255 Glutathione peroxidase CJD35_RS00985 PF16326 ABC transporter C-terminal domain CJD35_RS00985 PF00005 ABC transporter CJD35_RS01000 PF00072 Response regulator receiver domain CJD35_RS01000 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS01005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS01010 PF04304 Protein of unknown function (DUF454) CJD35_RS01030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJD35_RS01030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJD35_RS01035 PF07043 Protein of unknown function (DUF1328) CJD35_RS01050 PF00330 Aconitase family (aconitate hydratase) CJD35_RS01050 PF06434 Aconitate hydratase 2 N-terminus CJD35_RS01050 PF11791 Aconitate B N-terminal domain CJD35_RS01075 PF01979 Amidohydrolase family CJD35_RS01080 PF01979 Amidohydrolase family CJD35_RS01095 PF00392 Bacterial regulatory proteins, gntR family CJD35_RS01095 PF07702 UTRA domain CJD35_RS01105 PF02954 Bacterial regulatory protein, Fis family CJD35_RS01105 PF00072 Response regulator receiver domain CJD35_RS01105 PF00158 Sigma-54 interaction domain CJD35_RS01110 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS01110 PF09456 RcsC Alpha-Beta-Loop (ABL) CJD35_RS01110 PF00072 Response regulator receiver domain CJD35_RS01110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS01115 PF02397 Bacterial sugar transferase CJD35_RS01125 PF04542 Sigma-70 region 2 CJD35_RS01125 PF08281 Sigma-70, region 4 CJD35_RS01130 PF00072 Response regulator receiver domain CJD35_RS01135 PF07568 Histidine kinase CJD35_RS01135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS01135 PF12282 Signal transduction histidine kinase CJD35_RS01140 PF01702 Queuine tRNA-ribosyltransferase CJD35_RS01155 PF00563 EAL domain CJD35_RS01155 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS01155 PF03707 Bacterial signalling protein N terminal repeat CJD35_RS01155 PF13188 PAS domain CJD35_RS01160 PF00583 Acetyltransferase (GNAT) family CJD35_RS01165 PF00118 TCP-1/cpn60 chaperonin family CJD35_RS01170 PF00166 Chaperonin 10 Kd subunit CJD35_RS01175 PF00582 Universal stress protein family CJD35_RS01180 PF02798 Glutathione S-transferase, N-terminal domain CJD35_RS01185 PF13460 NAD(P)H-binding CJD35_RS01195 PF01653 NAD-dependent DNA ligase adenylation domain CJD35_RS01195 PF03120 NAD-dependent DNA ligase OB-fold domain CJD35_RS01195 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CJD35_RS01195 PF00533 BRCA1 C Terminus (BRCT) domain CJD35_RS01205 PF02463 RecF/RecN/SMC N terminal domain CJD35_RS01210 PF13525 Outer membrane lipoprotein CJD35_RS01225 PF00312 Ribosomal protein S15 CJD35_RS01230 PF01509 TruB family pseudouridylate synthase (N terminal domain) CJD35_RS01230 PF16198 tRNA pseudouridylate synthase B C-terminal domain CJD35_RS01235 PF00265 Thymidine kinase CJD35_RS01245 PF02033 Ribosome-binding factor A CJD35_RS01250 PF00009 Elongation factor Tu GTP binding domain CJD35_RS01250 PF04760 Translation initiation factor IF-2, N-terminal region CJD35_RS01250 PF08364 Bacterial translation initiation factor IF-2 associated region CJD35_RS01250 PF11987 Translation-initiation factor 2 CJD35_RS01265 PF13184 NusA-like KH domain CJD35_RS01265 PF08529 NusA N-terminal domain CJD35_RS01265 PF00575 S1 RNA binding domain CJD35_RS01270 PF17384 RimP C-terminal SH3 domain CJD35_RS01270 PF02576 RimP N-terminal domain CJD35_RS01275 PF07995 Glucose / Sorbosone dehydrogenase CJD35_RS01280 PF06418 CTP synthase N-terminus CJD35_RS01280 PF00117 Glutamine amidotransferase class-I CJD35_RS01290 PF00121 Triosephosphate isomerase CJD35_RS01300 PF04715 Anthranilate synthase component I, N terminal region CJD35_RS01300 PF00425 chorismate binding enzyme CJD35_RS01315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS01315 PF03466 LysR substrate binding domain CJD35_RS01320 PF00920 Dehydratase family CJD35_RS01330 PF00756 Putative esterase CJD35_RS01340 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS01340 PF00107 Zinc-binding dehydrogenase CJD35_RS01350 PF17932 Tetracyclin repressor-like, C-terminal domain CJD35_RS01350 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS01355 PF02547 Queuosine biosynthesis protein CJD35_RS01360 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJD35_RS01365 PF01467 Cytidylyltransferase-like CJD35_RS01370 PF00348 Polyprenyl synthetase CJD35_RS01375 PF02609 Exonuclease VII small subunit CJD35_RS01390 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CJD35_RS01390 PF02769 AIR synthase related protein, C-terminal domain CJD35_RS01390 PF00586 AIR synthase related protein, N-terminal domain CJD35_RS01400 PF13649 Methyltransferase domain CJD35_RS01415 PF00210 Ferritin-like domain CJD35_RS01420 PF00293 NUDIX domain CJD35_RS01440 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CJD35_RS01445 PF00589 Phage integrase family CJD35_RS01445 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS01460 PF01202 Shikimate kinase CJD35_RS01465 PF01761 3-dehydroquinate synthase CJD35_RS01475 PF01197 Ribosomal protein L31 CJD35_RS01480 PF07977 FabA-like domain CJD35_RS01495 PF17820 PDZ domain CJD35_RS01495 PF02163 Peptidase family M50 CJD35_RS01500 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CJD35_RS01500 PF13288 DXP reductoisomerase C-terminal domain CJD35_RS01500 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CJD35_RS01510 PF01255 Putative undecaprenyl diphosphate synthase CJD35_RS01515 PF01765 Ribosome recycling factor CJD35_RS01520 PF00696 Amino acid kinase family CJD35_RS01525 PF00889 Elongation factor TS CJD35_RS01530 PF00318 Ribosomal protein S2 CJD35_RS01540 PF01066 CDP-alcohol phosphatidyltransferase CJD35_RS01550 PF00180 Isocitrate/isopropylmalate dehydrogenase CJD35_RS01555 PF00795 Carbon-nitrogen hydrolase CJD35_RS01555 PF00583 Acetyltransferase (GNAT) family CJD35_RS01560 PF01380 SIS domain CJD35_RS01565 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJD35_RS01565 PF00149 Calcineurin-like phosphoesterase CJD35_RS01570 PF12804 MobA-like NTP transferase domain CJD35_RS01570 PF00132 Bacterial transferase hexapeptide (six repeats) CJD35_RS01575 PF13419 Haloacid dehalogenase-like hydrolase CJD35_RS01580 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS01585 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS01585 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJD35_RS01595 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJD35_RS01595 PF00364 Biotin-requiring enzyme CJD35_RS01595 PF02817 e3 binding domain CJD35_RS01600 PF00676 Dehydrogenase E1 component CJD35_RS01600 PF16078 2-oxoglutarate dehydrogenase N-terminus CJD35_RS01600 PF02779 Transketolase, pyrimidine binding domain CJD35_RS01600 PF16870 2-oxoglutarate dehydrogenase C-terminal CJD35_RS01605 PF00549 CoA-ligase CJD35_RS01605 PF02629 CoA binding domain CJD35_RS01610 PF00056 lactate/malate dehydrogenase, NAD binding domain CJD35_RS01610 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CJD35_RS01615 PF03969 AFG1-like ATPase CJD35_RS01625 PF13085 2Fe-2S iron-sulfur cluster binding domain CJD35_RS01645 PF00483 Nucleotidyl transferase CJD35_RS01655 PF00380 Ribosomal protein S9/S16 CJD35_RS01660 PF00572 Ribosomal protein L13 CJD35_RS01670 PF02628 Cytochrome oxidase assembly protein CJD35_RS01675 PF01081 KDPG and KHG aldolase CJD35_RS01680 PF05035 2-keto-3-deoxy-galactonokinase CJD35_RS01685 PF00920 Dehydratase family CJD35_RS01690 PF00171 Aldehyde dehydrogenase family CJD35_RS01700 PF07729 FCD domain CJD35_RS01700 PF00392 Bacterial regulatory proteins, gntR family CJD35_RS01720 PF02424 ApbE family CJD35_RS01730 PF13640 2OG-Fe(II) oxygenase superfamily CJD35_RS01730 PF18331 PKHD-type hydroxylase C-terminal domain CJD35_RS01735 PF03544 Gram-negative bacterial TonB protein C-terminal CJD35_RS01740 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS01740 PF00593 TonB dependent receptor CJD35_RS01755 PF00762 Ferrochelatase CJD35_RS01760 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJD35_RS01765 PF13380 CoA binding domain CJD35_RS01770 PF10609 NUBPL iron-transfer P-loop NTPase CJD35_RS01775 PF12221 Bacterial membrane protein N terminal CJD35_RS01775 PF01145 SPFH domain / Band 7 family CJD35_RS01780 PF01145 SPFH domain / Band 7 family CJD35_RS01785 PF13180 PDZ domain CJD35_RS01790 PF05872 Bacterial protein of unknown function (DUF853) CJD35_RS01800 PF00291 Pyridoxal-phosphate dependent enzyme CJD35_RS01820 PF04561 RNA polymerase Rpb2, domain 2 CJD35_RS01820 PF04565 RNA polymerase Rpb2, domain 3 CJD35_RS01820 PF10385 RNA polymerase beta subunit external 1 domain CJD35_RS01820 PF00562 RNA polymerase Rpb2, domain 6 CJD35_RS01820 PF04560 RNA polymerase Rpb2, domain 7 CJD35_RS01820 PF04563 RNA polymerase beta subunit CJD35_RS01825 PF05000 RNA polymerase Rpb1, domain 4 CJD35_RS01825 PF04983 RNA polymerase Rpb1, domain 3 CJD35_RS01825 PF00623 RNA polymerase Rpb1, domain 2 CJD35_RS01825 PF04997 RNA polymerase Rpb1, domain 1 CJD35_RS01825 PF04998 RNA polymerase Rpb1, domain 5 CJD35_RS01920 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS01920 PF00593 TonB dependent receptor CJD35_RS01930 PF00376 MerR family regulatory protein CJD35_RS01930 PF09278 MerR, DNA binding CJD35_RS01935 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS01935 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS01935 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS01935 PF12806 Acetyl-CoA dehydrogenase C-terminal like CJD35_RS01940 PF13520 Amino acid permease CJD35_RS01945 PF00226 DnaJ domain CJD35_RS01945 PF01556 DnaJ C terminal domain CJD35_RS01945 PF00684 DnaJ central domain CJD35_RS01950 PF00012 Hsp70 protein CJD35_RS01965 PF13439 Glycosyltransferase Family 4 CJD35_RS01965 PF00534 Glycosyl transferases group 1 CJD35_RS01970 PF02910 Fumarate reductase flavoprotein C-term CJD35_RS01970 PF00890 FAD binding domain CJD35_RS01985 PF13426 PAS domain CJD35_RS01985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJD35_RS01985 PF08447 PAS fold CJD35_RS02000 PF02075 Crossover junction endodeoxyribonuclease RuvC CJD35_RS02005 PF01709 Transcriptional regulator CJD35_RS02010 PF01906 Putative heavy-metal-binding CJD35_RS02015 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) CJD35_RS02025 PF00224 Pyruvate kinase, barrel domain CJD35_RS02025 PF02887 Pyruvate kinase, alpha/beta domain CJD35_RS02030 PF06969 HemN C-terminal domain CJD35_RS02030 PF04055 Radical SAM superfamily CJD35_RS02040 PF01725 Ham1 family CJD35_RS02045 PF01138 3' exoribonuclease family, domain 1 CJD35_RS02045 PF03725 3' exoribonuclease family, domain 2 CJD35_RS02055 PF01628 HrcA protein C terminal domain CJD35_RS02060 PF01025 GrpE CJD35_RS02080 PF00246 Zinc carboxypeptidase CJD35_RS02080 PF18027 Cytosolic carboxypeptidase N-terminal domain CJD35_RS02090 PF00444 Ribosomal protein L36 CJD35_RS02100 PF03965 Penicillinase repressor CJD35_RS02105 PF00462 Glutaredoxin CJD35_RS02120 PF00694 Aconitase C-terminal domain CJD35_RS02125 PF00330 Aconitase family (aconitate hydratase) CJD35_RS02130 PF13417 Glutathione S-transferase, N-terminal domain CJD35_RS02130 PF00043 Glutathione S-transferase, C-terminal domain CJD35_RS02140 PF00463 Isocitrate lyase family CJD35_RS02145 PF09856 Predicted transcriptional regulator (DUF2083) CJD35_RS02145 PF06114 IrrE N-terminal-like domain CJD35_RS02145 PF01381 Helix-turn-helix CJD35_RS02170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJD35_RS02170 PF18029 Glyoxalase-like domain CJD35_RS02175 PF07237 Protein of unknown function (DUF1428) CJD35_RS02185 PF03060 Nitronate monooxygenase CJD35_RS02190 PF01842 ACT domain CJD35_RS02190 PF00696 Amino acid kinase family CJD35_RS02190 PF13840 ACT domain CJD35_RS02205 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJD35_RS02205 PF00588 SpoU rRNA Methylase family CJD35_RS02215 PF00111 2Fe-2S iron-sulfur cluster binding domain CJD35_RS02235 PF07536 HWE histidine kinase CJD35_RS02235 PF13581 Histidine kinase-like ATPase domain CJD35_RS02235 PF13426 PAS domain CJD35_RS02240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJD35_RS02255 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJD35_RS02265 PF01923 Cobalamin adenosyltransferase CJD35_RS02270 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS02280 PF07662 Na+ dependent nucleoside transporter C-terminus CJD35_RS02280 PF01773 Na+ dependent nucleoside transporter N-terminus CJD35_RS02280 PF07670 Nucleoside recognition CJD35_RS02305 PF03144 Elongation factor Tu domain 2 CJD35_RS02305 PF00009 Elongation factor Tu GTP binding domain CJD35_RS02305 PF00679 Elongation factor G C-terminus CJD35_RS02330 PF00472 RF-1 domain CJD35_RS02330 PF03462 PCRF domain CJD35_RS02340 PF00905 Penicillin binding protein transpeptidase domain CJD35_RS02340 PF17092 Penicillin-binding protein OB-like domain CJD35_RS02340 PF00912 Transglycosylase CJD35_RS02345 PF11741 AMIN domain CJD35_RS02345 PF01520 N-acetylmuramoyl-L-alanine amidase CJD35_RS02350 PF00575 S1 RNA binding domain CJD35_RS02350 PF12111 Polyribonucleotide phosphorylase C terminal CJD35_RS02350 PF10150 Ribonuclease E/G family CJD35_RS02365 PF00468 Ribosomal protein L34 CJD35_RS02370 PF00825 Ribonuclease P CJD35_RS02375 PF01809 Putative membrane protein insertion efficiency factor CJD35_RS02380 PF14849 YidC periplasmic domain CJD35_RS02380 PF02096 60Kd inner membrane protein CJD35_RS02385 PF01926 50S ribosome-binding GTPase CJD35_RS02390 PF08274 PhnA Zinc-Ribbon CJD35_RS02390 PF03831 PhnA domain CJD35_RS02400 PF13722 5TM C-terminal transporter carbon starvation CstA CJD35_RS02400 PF02554 Carbon starvation protein CstA CJD35_RS02405 PF04328 Selenoprotein, putative CJD35_RS02410 PF13478 XdhC Rossmann domain CJD35_RS02410 PF02625 XdhC and CoxI family CJD35_RS02450 PF01965 DJ-1/PfpI family CJD35_RS02465 PF13378 Enolase C-terminal domain-like CJD35_RS02465 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CJD35_RS02470 PF00664 ABC transporter transmembrane region CJD35_RS02470 PF00005 ABC transporter CJD35_RS02480 PF02472 Biopolymer transport protein ExbD/TolR CJD35_RS02485 PF02472 Biopolymer transport protein ExbD/TolR CJD35_RS02490 PF01618 MotA/TolQ/ExbB proton channel family CJD35_RS02505 PF03447 Homoserine dehydrogenase, NAD binding domain CJD35_RS02505 PF01842 ACT domain CJD35_RS02505 PF00742 Homoserine dehydrogenase CJD35_RS02515 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CJD35_RS02525 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS02530 PF06628 Catalase-related immune-responsive CJD35_RS02530 PF00199 Catalase CJD35_RS02535 PF02617 ATP-dependent Clp protease adaptor protein ClpS CJD35_RS02545 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CJD35_RS02545 PF00561 alpha/beta hydrolase fold CJD35_RS02550 PF00155 Aminotransferase class I and II CJD35_RS02560 PF01799 [2Fe-2S] binding domain CJD35_RS02560 PF00111 2Fe-2S iron-sulfur cluster binding domain CJD35_RS02565 PF08446 PAS fold CJD35_RS02565 PF01590 GAF domain CJD35_RS02565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS02565 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS02565 PF00360 Phytochrome region CJD35_RS02570 PF01126 Heme oxygenase CJD35_RS02590 PF01921 tRNA synthetases class I (K) CJD35_RS02615 PF01695 IstB-like ATP binding protein CJD35_RS02620 PF00665 Integrase core domain CJD35_RS02630 PF13411 MerR HTH family regulatory protein CJD35_RS02635 PF00929 Exonuclease CJD35_RS02635 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJD35_RS02635 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJD35_RS02635 PF02811 PHP domain CJD35_RS02635 PF14579 Helix-hairpin-helix motif CJD35_RS02695 PF00872 Transposase, Mutator family CJD35_RS02705 PF01256 Carbohydrate kinase CJD35_RS02740 PF08448 PAS fold CJD35_RS02740 PF13188 PAS domain CJD35_RS02740 PF00072 Response regulator receiver domain CJD35_RS02740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS02740 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS02745 PF13426 PAS domain CJD35_RS02745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS02745 PF00072 Response regulator receiver domain CJD35_RS02750 PF00205 Thiamine pyrophosphate enzyme, central domain CJD35_RS02750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJD35_RS02750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJD35_RS02780 PF00106 short chain dehydrogenase CJD35_RS02785 PF00107 Zinc-binding dehydrogenase CJD35_RS02785 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS02785 PF13823 Alcohol dehydrogenase GroES-associated CJD35_RS02855 PF00154 recA bacterial DNA recombination protein CJD35_RS02860 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS02860 PF00072 Response regulator receiver domain CJD35_RS02865 PF13188 PAS domain CJD35_RS02865 PF00072 Response regulator receiver domain CJD35_RS02865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS02865 PF08448 PAS fold CJD35_RS02865 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS02875 PF01668 SmpB protein CJD35_RS02880 PF00701 Dihydrodipicolinate synthetase family CJD35_RS02885 PF01464 Transglycosylase SLT domain CJD35_RS02890 PF03449 Transcription elongation factor, N-terminal CJD35_RS02890 PF01272 Transcription elongation factor, GreA/GreB, C-term CJD35_RS02900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJD35_RS02900 PF00672 HAMP domain CJD35_RS02900 PF02743 Cache domain CJD35_RS02905 PF03976 Polyphosphate kinase 2 (PPK2) CJD35_RS02910 PF00152 tRNA synthetases class II (D, K and N) CJD35_RS02910 PF02938 GAD domain CJD35_RS02910 PF01336 OB-fold nucleic acid binding domain CJD35_RS02915 PF01612 3'-5' exonuclease CJD35_RS02915 PF00570 HRDC domain CJD35_RS02930 PF03471 Transporter associated domain CJD35_RS02930 PF03741 Integral membrane protein TerC family CJD35_RS02935 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain CJD35_RS02940 PF01757 Acyltransferase family CJD35_RS02950 PF00072 Response regulator receiver domain CJD35_RS02955 PF00375 Sodium:dicarboxylate symporter family CJD35_RS02965 PF01048 Phosphorylase superfamily CJD35_RS02970 PF00156 Phosphoribosyl transferase domain CJD35_RS02975 PF02167 Cytochrome C1 family CJD35_RS02980 PF00033 Cytochrome b/b6/petB CJD35_RS02980 PF00032 Cytochrome b(C-terminal)/b6/petD CJD35_RS02985 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CJD35_RS02985 PF00355 Rieske [2Fe-2S] domain CJD35_RS02990 PF00588 SpoU rRNA Methylase family CJD35_RS02995 PF01218 Coproporphyrinogen III oxidase CJD35_RS03010 PF03099 Biotin/lipoate A/B protein ligase family CJD35_RS03030 PF06508 Queuosine biosynthesis protein QueC CJD35_RS03040 PF01430 Hsp33 protein CJD35_RS03045 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJD35_RS03045 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJD35_RS03050 PF00202 Aminotransferase class-III CJD35_RS03060 PF07196 Flagellin hook IN motif CJD35_RS03060 PF07195 Flagellar hook-associated protein 2 C-terminus CJD35_RS03060 PF02465 Flagellar hook-associated protein 2 N-terminus CJD35_RS03075 PF01312 FlhB HrpN YscU SpaS Family CJD35_RS03080 PF01311 Bacterial export proteins, family 1 CJD35_RS03085 PF01313 Bacterial export proteins, family 3 CJD35_RS03090 PF00813 FliP family CJD35_RS03100 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CJD35_RS03125 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJD35_RS03125 PF18269 T3SS EscN ATPase C-terminal domain CJD35_RS03135 PF01706 FliG C-terminal domain CJD35_RS03135 PF14842 FliG N-terminal domain CJD35_RS03135 PF14841 FliG middle domain CJD35_RS03140 PF08345 Flagellar M-ring protein C-terminal CJD35_RS03140 PF01514 Secretory protein of YscJ/FliF family CJD35_RS03145 PF02049 Flagellar hook-basal body complex protein FliE CJD35_RS03150 PF02954 Bacterial regulatory protein, Fis family CJD35_RS03150 PF00158 Sigma-54 interaction domain CJD35_RS03150 PF00072 Response regulator receiver domain CJD35_RS03155 PF00700 Bacterial flagellin C-terminal helical region CJD35_RS03155 PF00669 Bacterial flagellin N-terminal helical region CJD35_RS03155 PF00700 Bacterial flagellin C-terminal helical region CJD35_RS03155 PF00669 Bacterial flagellin N-terminal helical region CJD35_RS03160 PF04349 Periplasmic glucan biosynthesis protein, MdoG CJD35_RS03165 PF13632 Glycosyl transferase family group 2 CJD35_RS03170 PF04542 Sigma-70 region 2 CJD35_RS03170 PF04545 Sigma-70, region 4 CJD35_RS03170 PF04539 Sigma-70 region 3 CJD35_RS03175 PF00771 FHIPEP family CJD35_RS03205 PF01618 MotA/TolQ/ExbB proton channel family CJD35_RS03215 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJD35_RS03215 PF00460 Flagella basal body rod protein CJD35_RS03220 PF03963 Flagellar hook capping protein - N-terminal region CJD35_RS03225 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJD35_RS03225 PF00460 Flagella basal body rod protein CJD35_RS03230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJD35_RS03230 PF00460 Flagella basal body rod protein CJD35_RS03235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CJD35_RS03235 PF00460 Flagella basal body rod protein CJD35_RS03245 PF02119 Flagellar P-ring protein CJD35_RS03250 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CJD35_RS03250 PF10135 Rod binding protein CJD35_RS03265 PF01618 MotA/TolQ/ExbB proton channel family CJD35_RS03270 PF13677 Membrane MotB of proton-channel complex MotA/MotB CJD35_RS03270 PF00691 OmpA family CJD35_RS03275 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CJD35_RS03275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CJD35_RS03280 PF01165 Ribosomal protein S21 CJD35_RS03285 PF00596 Class II Aldolase and Adducin N-terminal domain CJD35_RS03290 PF08937 MTH538 TIR-like domain (DUF1863) CJD35_RS03290 PF00400 WD domain, G-beta repeat CJD35_RS03310 PF03781 Sulfatase-modifying factor enzyme 1 CJD35_RS03335 PF00005 ABC transporter CJD35_RS03350 PF01968 Hydantoinase/oxoprolinase CJD35_RS03350 PF05378 Hydantoinase/oxoprolinase N-terminal region CJD35_RS03355 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS03355 PF08448 PAS fold CJD35_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS03355 PF00072 Response regulator receiver domain CJD35_RS03355 PF13188 PAS domain CJD35_RS03385 PF01769 Divalent cation transporter CJD35_RS03385 PF00571 CBS domain CJD35_RS03385 PF03448 MgtE intracellular N domain CJD35_RS03390 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJD35_RS03410 PF00311 Phosphoenolpyruvate carboxylase CJD35_RS03415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJD35_RS03415 PF00672 HAMP domain CJD35_RS03425 PF01451 Low molecular weight phosphotyrosine protein phosphatase CJD35_RS03430 PF00216 Bacterial DNA-binding protein CJD35_RS03435 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CJD35_RS03435 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CJD35_RS03440 PF02504 Fatty acid synthesis protein CJD35_RS03445 PF01783 Ribosomal L32p protein family CJD35_RS03455 PF00753 Metallo-beta-lactamase superfamily CJD35_RS03465 PF03009 Glycerophosphoryl diester phosphodiesterase family CJD35_RS03470 PF03960 ArsC family CJD35_RS03500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJD35_RS03520 PF05683 Fumarase C-terminus CJD35_RS03520 PF05681 Fumarate hydratase (Fumerase) CJD35_RS03530 PF00317 Ribonucleotide reductase, all-alpha domain CJD35_RS03530 PF03477 ATP cone domain CJD35_RS03530 PF02867 Ribonucleotide reductase, barrel domain CJD35_RS03570 PF00271 Helicase conserved C-terminal domain CJD35_RS03570 PF04851 Type III restriction enzyme, res subunit CJD35_RS03570 PF17757 UvrB interaction domain CJD35_RS03570 PF12344 Ultra-violet resistance protein B CJD35_RS03570 PF02151 UvrB/uvrC motif CJD35_RS03575 PF00005 ABC transporter CJD35_RS03575 PF00664 ABC transporter transmembrane region CJD35_RS03590 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CJD35_RS03590 PF00326 Prolyl oligopeptidase family CJD35_RS03595 PF01321 Creatinase/Prolidase N-terminal domain CJD35_RS03595 PF00557 Metallopeptidase family M24 CJD35_RS03605 PF00356 Bacterial regulatory proteins, lacI family CJD35_RS03625 PF01795 MraW methylase family CJD35_RS03630 PF00004 ATPase family associated with various cellular activities (AAA) CJD35_RS03630 PF01434 Peptidase family M41 CJD35_RS03630 PF17862 AAA+ lid domain CJD35_RS03635 PF03466 LysR substrate binding domain CJD35_RS03635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS03640 PF00072 Response regulator receiver domain CJD35_RS03640 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS03645 PF00043 Glutathione S-transferase, C-terminal domain CJD35_RS03645 PF13417 Glutathione S-transferase, N-terminal domain CJD35_RS03650 PF16177 Acetyl-coenzyme A synthetase N-terminus CJD35_RS03650 PF13193 AMP-binding enzyme C-terminal domain CJD35_RS03650 PF00501 AMP-binding enzyme CJD35_RS03665 PF01063 Amino-transferase class IV CJD35_RS03670 PF01212 Beta-eliminating lyase CJD35_RS03680 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CJD35_RS03680 PF01588 Putative tRNA binding domain CJD35_RS03680 PF03147 Ferredoxin-fold anticodon binding domain CJD35_RS03680 PF03483 B3/4 domain CJD35_RS03680 PF03484 tRNA synthetase B5 domain CJD35_RS03685 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CJD35_RS03685 PF01409 tRNA synthetases class II core domain (F) CJD35_RS03690 PF01810 LysE type translocator CJD35_RS03695 PF00453 Ribosomal protein L20 CJD35_RS03700 PF01632 Ribosomal protein L35 CJD35_RS03705 PF00459 Inositol monophosphatase family CJD35_RS03720 PF14572 Phosphoribosyl synthetase-associated domain CJD35_RS03720 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CJD35_RS03725 PF00795 Carbon-nitrogen hydrolase CJD35_RS03725 PF02540 NAD synthase CJD35_RS03730 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJD35_RS03755 PF00814 Glycoprotease family CJD35_RS03760 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CJD35_RS03760 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CJD35_RS03770 PF00294 pfkB family carbohydrate kinase CJD35_RS03785 PF08331 Domain of unknown function (DUF1730) CJD35_RS03790 PF13732 Domain of unknown function (DUF4162) CJD35_RS03790 PF00005 ABC transporter CJD35_RS03800 PF01641 SelR domain CJD35_RS03825 PF02142 MGS-like domain CJD35_RS03825 PF01808 AICARFT/IMPCHase bienzyme CJD35_RS03840 PF00834 Ribulose-phosphate 3 epimerase family CJD35_RS03850 PF01189 16S rRNA methyltransferase RsmB/F CJD35_RS03850 PF01029 NusB family CJD35_RS03865 PF00483 Nucleotidyl transferase CJD35_RS03870 PF16363 GDP-mannose 4,6 dehydratase CJD35_RS03875 PF00436 Single-strand binding protein family CJD35_RS03880 PF07670 Nucleoside recognition CJD35_RS03880 PF02421 Ferrous iron transport protein B CJD35_RS03880 PF07664 Ferrous iron transport protein B C terminus CJD35_RS03900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJD35_RS03905 PF00885 6,7-dimethyl-8-ribityllumazine synthase CJD35_RS03910 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CJD35_RS03910 PF00925 GTP cyclohydrolase II CJD35_RS03915 PF00677 Lumazine binding domain CJD35_RS03920 PF01872 RibD C-terminal domain CJD35_RS03920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJD35_RS03935 PF04286 Protein of unknown function (DUF445) CJD35_RS03940 PF00873 AcrB/AcrD/AcrF family CJD35_RS03945 PF13533 Biotin-lipoyl like CJD35_RS03950 PF04226 Transglycosylase associated protein CJD35_RS03955 PF04226 Transglycosylase associated protein CJD35_RS03985 PF01634 ATP phosphoribosyltransferase CJD35_RS03990 PF00815 Histidinol dehydrogenase CJD35_RS03995 PF01029 NusB family CJD35_RS04000 PF00586 AIR synthase related protein, N-terminal domain CJD35_RS04000 PF02769 AIR synthase related protein, C-terminal domain CJD35_RS04010 PF00326 Prolyl oligopeptidase family CJD35_RS04020 PF00155 Aminotransferase class I and II CJD35_RS04035 PF00202 Aminotransferase class-III CJD35_RS04040 PF01176 Translation initiation factor 1A / IF-1 CJD35_RS04045 PF02545 Maf-like protein CJD35_RS04055 PF03884 DNA gyrase inhibitor YacG CJD35_RS04065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CJD35_RS04085 PF00578 AhpC/TSA family CJD35_RS04100 PF02463 RecF/RecN/SMC N terminal domain CJD35_RS04130 PF00174 Oxidoreductase molybdopterin binding domain CJD35_RS04135 PF01292 Prokaryotic cytochrome b561 CJD35_RS04150 PF04055 Radical SAM superfamily CJD35_RS04160 PF00712 DNA polymerase III beta subunit, N-terminal domain CJD35_RS04160 PF02767 DNA polymerase III beta subunit, central domain CJD35_RS04160 PF02768 DNA polymerase III beta subunit, C-terminal domain CJD35_RS04165 PF08447 PAS fold CJD35_RS04165 PF08448 PAS fold CJD35_RS04165 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS04165 PF00563 EAL domain CJD35_RS04175 PF00072 Response regulator receiver domain CJD35_RS04175 PF01339 CheB methylesterase CJD35_RS04195 PF01964 Radical SAM ThiC family CJD35_RS04195 PF13667 ThiC-associated domain CJD35_RS04205 PF04174 A circularly permuted ATPgrasp CJD35_RS04210 PF01841 Transglutaminase-like superfamily CJD35_RS04210 PF08379 Bacterial transglutaminase-like N-terminal region CJD35_RS04215 PF00067 Cytochrome P450 CJD35_RS04230 PF00793 DAHP synthetase I family CJD35_RS04235 PF00171 Aldehyde dehydrogenase family CJD35_RS04245 PF01263 Aldose 1-epimerase CJD35_RS04250 PF03144 Elongation factor Tu domain 2 CJD35_RS04250 PF00009 Elongation factor Tu GTP binding domain CJD35_RS04250 PF16658 Class II release factor RF3, C-terminal domain CJD35_RS04260 PF00593 TonB dependent receptor CJD35_RS04260 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS04275 PF00561 alpha/beta hydrolase fold CJD35_RS04275 PF07021 Methionine biosynthesis protein MetW CJD35_RS04280 PF00561 alpha/beta hydrolase fold CJD35_RS04285 PF00155 Aminotransferase class I and II CJD35_RS04290 PF02153 Prephenate dehydrogenase CJD35_RS04310 PF00005 ABC transporter CJD35_RS04320 PF02678 Pirin CJD35_RS04320 PF05726 Pirin C-terminal cupin domain CJD35_RS04330 PF00226 DnaJ domain CJD35_RS04340 PF00012 Hsp70 protein CJD35_RS04345 PF07728 AAA domain (dynein-related subfamily) CJD35_RS04345 PF08406 CbbQ/NirQ/NorQ C-terminal CJD35_RS04345 PF12556 Cobaltochelatase CobS subunit N terminal CJD35_RS04360 PF11775 Cobalamin biosynthesis protein CobT VWA domain CJD35_RS04360 PF06213 Cobalamin biosynthesis protein CobT CJD35_RS04365 PF01272 Transcription elongation factor, GreA/GreB, C-term CJD35_RS04365 PF03449 Transcription elongation factor, N-terminal CJD35_RS04370 PF00210 Ferritin-like domain CJD35_RS04375 PF01169 Uncharacterized protein family UPF0016 CJD35_RS04385 PF00471 Ribosomal protein L33 CJD35_RS04425 PF07690 Major Facilitator Superfamily CJD35_RS04430 PF13520 Amino acid permease CJD35_RS04435 PF02578 Multi-copper polyphenol oxidoreductase laccase CJD35_RS04455 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJD35_RS04455 PF00529 HlyD membrane-fusion protein of T1SS CJD35_RS04460 PF00664 ABC transporter transmembrane region CJD35_RS04460 PF00005 ABC transporter CJD35_RS04465 PF01757 Acyltransferase family CJD35_RS04490 PF00534 Glycosyl transferases group 1 CJD35_RS04490 PF13439 Glycosyltransferase Family 4 CJD35_RS04495 PF01757 Acyltransferase family CJD35_RS04510 PF08946 Osmosensory transporter coiled coil CJD35_RS04510 PF00083 Sugar (and other) transporter CJD35_RS04520 PF13840 ACT domain CJD35_RS04520 PF00696 Amino acid kinase family CJD35_RS04525 PF05721 Phytanoyl-CoA dioxygenase (PhyH) CJD35_RS04530 PF06339 Ectoine synthase CJD35_RS04535 PF00202 Aminotransferase class-III CJD35_RS04540 PF00583 Acetyltransferase (GNAT) family CJD35_RS04550 PF12833 Helix-turn-helix domain CJD35_RS04550 PF06719 AraC-type transcriptional regulator N-terminus CJD35_RS04555 PF00248 Aldo/keto reductase family CJD35_RS04590 PF01943 Polysaccharide biosynthesis protein CJD35_RS04595 PF00571 CBS domain CJD35_RS04605 PF03061 Thioesterase superfamily CJD35_RS04625 PF17827 PrmC N-terminal domain CJD35_RS04625 PF13847 Methyltransferase domain CJD35_RS04630 PF03462 PCRF domain CJD35_RS04630 PF00472 RF-1 domain CJD35_RS04635 PF13393 Histidyl-tRNA synthetase CJD35_RS04645 PF00719 Inorganic pyrophosphatase CJD35_RS04660 PF02657 Fe-S metabolism associated domain CJD35_RS04695 PF04012 PspA/IM30 family CJD35_RS04700 PF02954 Bacterial regulatory protein, Fis family CJD35_RS04700 PF00158 Sigma-54 interaction domain CJD35_RS04705 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJD35_RS04705 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJD35_RS04710 PF03061 Thioesterase superfamily CJD35_RS04715 PF01618 MotA/TolQ/ExbB proton channel family CJD35_RS04720 PF02472 Biopolymer transport protein ExbD/TolR CJD35_RS04730 PF04052 TolB amino-terminal domain CJD35_RS04730 PF07676 WD40-like Beta Propeller Repeat CJD35_RS04735 PF00691 OmpA family CJD35_RS04750 PF05193 Peptidase M16 inactive domain CJD35_RS04750 PF00675 Insulinase (Peptidase family M16) CJD35_RS04755 PF02861 Clp amino terminal domain, pathogenicity island component CJD35_RS04755 PF10431 C-terminal, D2-small domain, of ClpB protein CJD35_RS04755 PF00004 ATPase family associated with various cellular activities (AAA) CJD35_RS04755 PF07724 AAA domain (Cdc48 subfamily) CJD35_RS04755 PF17871 AAA lid domain CJD35_RS04775 PF00593 TonB dependent receptor CJD35_RS04775 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS04795 PF02601 Exonuclease VII, large subunit CJD35_RS04795 PF13742 OB-fold nucleic acid binding domain CJD35_RS04800 PF02843 Phosphoribosylglycinamide synthetase, C domain CJD35_RS04800 PF02844 Phosphoribosylglycinamide synthetase, N domain CJD35_RS04800 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CJD35_RS04805 PF00829 Ribosomal prokaryotic L21 protein CJD35_RS04815 PF00459 Inositol monophosphatase family CJD35_RS04820 PF01523 Putative modulator of DNA gyrase CJD35_RS04825 PF09297 NADH pyrophosphatase zinc ribbon domain CJD35_RS04825 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CJD35_RS04825 PF00293 NUDIX domain CJD35_RS04830 PF10576 Iron-sulfur binding domain of endonuclease III CJD35_RS04830 PF14815 NUDIX domain CJD35_RS04830 PF00633 Helix-hairpin-helix motif CJD35_RS04830 PF00730 HhH-GPD superfamily base excision DNA repair protein CJD35_RS04850 PF02463 RecF/RecN/SMC N terminal domain CJD35_RS04865 PF13396 Phospholipase_D-nuclease N-terminal CJD35_RS04865 PF13091 PLD-like domain CJD35_RS04870 PF01040 UbiA prenyltransferase family CJD35_RS04875 PF04452 RNA methyltransferase CJD35_RS04880 PF04107 Glutamate-cysteine ligase family 2(GCS2) CJD35_RS04905 PF01330 RuvA N terminal domain CJD35_RS04905 PF07499 RuvA, C-terminal domain CJD35_RS04915 PF05496 Holliday junction DNA helicase RuvB P-loop domain CJD35_RS04915 PF05491 RuvB C-terminal winged helix domain CJD35_RS04915 PF17864 RuvB AAA lid domain CJD35_RS04920 PF00501 AMP-binding enzyme CJD35_RS04925 PF00753 Metallo-beta-lactamase superfamily CJD35_RS04935 PF00753 Metallo-beta-lactamase superfamily CJD35_RS04935 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJD35_RS04940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJD35_RS04955 PF12697 Alpha/beta hydrolase family CJD35_RS04965 PF00589 Phage integrase family CJD35_RS04965 PF13356 Arm DNA-binding domain CJD35_RS04985 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS04985 PF00593 TonB dependent receptor CJD35_RS04990 PF00326 Prolyl oligopeptidase family CJD35_RS05020 PF00665 Integrase core domain CJD35_RS05025 PF01695 IstB-like ATP binding protein CJD35_RS05030 PF07859 alpha/beta hydrolase fold CJD35_RS05035 PF13193 AMP-binding enzyme C-terminal domain CJD35_RS05035 PF00501 AMP-binding enzyme CJD35_RS05045 PF00501 AMP-binding enzyme CJD35_RS05045 PF14535 AMP-binding enzyme C-terminal domain CJD35_RS05050 PF00665 Integrase core domain CJD35_RS05055 PF01695 IstB-like ATP binding protein CJD35_RS05090 PF00765 Autoinducer synthase CJD35_RS05095 PF03472 Autoinducer binding domain CJD35_RS05095 PF00196 Bacterial regulatory proteins, luxR family CJD35_RS05110 PF12102 Domain of unknown function (DUF3578) CJD35_RS05110 PF07728 AAA domain (dynein-related subfamily) CJD35_RS05125 PF00176 SNF2 family N-terminal domain CJD35_RS05125 PF12419 SNF2 Helicase protein CJD35_RS05125 PF00271 Helicase conserved C-terminal domain CJD35_RS05150 PF18818 Metallopeptidase superfamily domain CJD35_RS05150 PF08401 Domain of unknown function (DUF1738) CJD35_RS05160 PF17762 HTH domain found in ParB protein CJD35_RS05160 PF02195 ParB-like nuclease domain CJD35_RS05190 PF10145 Phage-related minor tail protein CJD35_RS05190 PF01551 Peptidase family M23 CJD35_RS05190 PF01464 Transglycosylase SLT domain CJD35_RS05215 PF11867 Domain of unknown function (DUF3387) CJD35_RS05215 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CJD35_RS05215 PF18766 SWI2/SNF2 ATPase CJD35_RS05240 PF02384 N-6 DNA Methylase CJD35_RS05240 PF12161 HsdM N-terminal domain CJD35_RS05250 PF13784 Fic/DOC family N-terminal CJD35_RS05250 PF02661 Fic/DOC family CJD35_RS05265 PF02534 Type IV secretory system Conjugative DNA transfer CJD35_RS05275 PF00437 Type II/IV secretion system protein CJD35_RS05280 PF04956 TrbC/VIRB2 family CJD35_RS05290 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CJD35_RS05300 PF04610 TrbL/VirB6 plasmid conjugal transfer protein CJD35_RS05315 PF03743 Bacterial conjugation TrbI-like protein CJD35_RS05330 PF09828 Chromate resistance exported protein CJD35_RS05335 PF02417 Chromate transporter CJD35_RS05340 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJD35_RS05360 PF00873 AcrB/AcrD/AcrF family CJD35_RS05380 PF00589 Phage integrase family CJD35_RS05380 PF13356 Arm DNA-binding domain CJD35_RS05385 PF00665 Integrase core domain CJD35_RS05390 PF01695 IstB-like ATP binding protein CJD35_RS05425 PF00012 Hsp70 protein CJD35_RS05440 PF00565 Staphylococcal nuclease homologue CJD35_RS05465 PF03358 NADPH-dependent FMN reductase CJD35_RS05470 PF01758 Sodium Bile acid symporter family CJD35_RS05475 PF03960 ArsC family CJD35_RS05495 PF03773 Predicted permease CJD35_RS05510 PF00589 Phage integrase family CJD35_RS05510 PF13356 Arm DNA-binding domain CJD35_RS05510 PF14659 Phage integrase, N-terminal SAM-like domain CJD35_RS05515 PF13173 AAA domain CJD35_RS05515 PF13635 Domain of unknown function (DUF4143) CJD35_RS05525 PF00271 Helicase conserved C-terminal domain CJD35_RS05525 PF00176 SNF2 family N-terminal domain CJD35_RS05525 PF12137 RNA polymerase recycling family C-terminal CJD35_RS05525 PF18337 RapA N-terminal Tudor like domain CJD35_RS05525 PF18339 RapA N-terminal Tudor like domain 1 CJD35_RS05550 PF01695 IstB-like ATP binding protein CJD35_RS05555 PF00665 Integrase core domain CJD35_RS05565 PF03664 Glycosyl hydrolase family 62 CJD35_RS05565 PF03422 Carbohydrate binding module (family 6) CJD35_RS05565 PF00553 Cellulose binding domain CJD35_RS05570 PF01238 Phosphomannose isomerase type I CJD35_RS05575 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJD35_RS05575 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJD35_RS05585 PF00925 GTP cyclohydrolase II CJD35_RS05610 PF09397 Ftsk gamma domain CJD35_RS05610 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CJD35_RS05610 PF01580 FtsK/SpoIIIE family CJD35_RS05610 PF17854 FtsK alpha domain CJD35_RS05625 PF04551 GcpE protein CJD35_RS05630 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CJD35_RS05635 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJD35_RS05635 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJD35_RS05635 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJD35_RS05635 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJD35_RS05645 PF13614 AAA domain CJD35_RS05650 PF02569 Pantoate-beta-alanine ligase CJD35_RS05655 PF03653 Uncharacterised protein family (UPF0093) CJD35_RS05660 PF01208 Uroporphyrinogen decarboxylase (URO-D) CJD35_RS05665 PF03618 Kinase/pyrophosphorylase CJD35_RS05670 PF02545 Maf-like protein CJD35_RS05675 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CJD35_RS05675 PF08501 Shikimate dehydrogenase substrate binding domain CJD35_RS05680 PF01121 Dephospho-CoA kinase CJD35_RS05685 PF00929 Exonuclease CJD35_RS05690 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CJD35_RS05690 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CJD35_RS05695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CJD35_RS05725 PF02630 SCO1/SenC CJD35_RS05730 PF03692 Putative zinc- or iron-chelating domain CJD35_RS05745 PF17773 UPF0176 acylphosphatase like domain CJD35_RS05745 PF00581 Rhodanese-like domain CJD35_RS05755 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS05755 PF00593 TonB dependent receptor CJD35_RS05760 PF01168 Alanine racemase, N-terminal domain CJD35_RS05770 PF01541 GIY-YIG catalytic domain CJD35_RS05780 PF12100 Domain of unknown function (DUF3576) CJD35_RS05785 PF13603 Leucyl-tRNA synthetase, Domain 2 CJD35_RS05785 PF00133 tRNA synthetases class I (I, L, M and V) CJD35_RS05785 PF08264 Anticodon-binding domain of tRNA CJD35_RS05800 PF00195 Chalcone and stilbene synthases, N-terminal domain CJD35_RS05800 PF02797 Chalcone and stilbene synthases, C-terminal domain CJD35_RS05810 PF01494 FAD binding domain CJD35_RS05815 PF01641 SelR domain CJD35_RS05820 PF00905 Penicillin binding protein transpeptidase domain CJD35_RS05820 PF17092 Penicillin-binding protein OB-like domain CJD35_RS05820 PF00912 Transglycosylase CJD35_RS05830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJD35_RS05830 PF07498 Rho termination factor, N-terminal domain CJD35_RS05830 PF07497 Rho termination factor, RNA-binding domain CJD35_RS05835 PF03741 Integral membrane protein TerC family CJD35_RS05840 PF00107 Zinc-binding dehydrogenase CJD35_RS05840 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS05845 PF01738 Dienelactone hydrolase family CJD35_RS05855 PF01926 50S ribosome-binding GTPase CJD35_RS05855 PF12631 MnmE helical domain CJD35_RS05855 PF10396 GTP-binding protein TrmE N-terminus CJD35_RS05860 PF01134 Glucose inhibited division protein A CJD35_RS05860 PF13932 GidA associated domain CJD35_RS05865 PF02527 rRNA small subunit methyltransferase G CJD35_RS05870 PF13614 AAA domain CJD35_RS05875 PF02195 ParB-like nuclease domain CJD35_RS05875 PF17762 HTH domain found in ParB protein CJD35_RS05880 PF01433 Peptidase family M1 domain CJD35_RS05880 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CJD35_RS05880 PF11940 Domain of unknown function (DUF3458) Ig-like fold CJD35_RS05900 PF11799 impB/mucB/samB family C-terminal domain CJD35_RS05900 PF00817 impB/mucB/samB family CJD35_RS05930 PF01613 Flavin reductase like domain CJD35_RS05935 PF01515 Phosphate acetyl/butaryl transferase CJD35_RS05935 PF00390 Malic enzyme, N-terminal domain CJD35_RS05935 PF03949 Malic enzyme, NAD binding domain CJD35_RS05940 PF05190 MutS family domain IV CJD35_RS05940 PF01624 MutS domain I CJD35_RS05940 PF05192 MutS domain III CJD35_RS05940 PF00488 MutS domain V CJD35_RS05940 PF05188 MutS domain II CJD35_RS05945 PF01966 HD domain CJD35_RS05945 PF08335 GlnD PII-uridylyltransferase CJD35_RS05960 PF00005 ABC transporter CJD35_RS05965 PF02405 Permease MlaE CJD35_RS05980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJD35_RS05980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJD35_RS05985 PF01053 Cys/Met metabolism PLP-dependent enzyme CJD35_RS05990 PF08494 DEAD/H associated CJD35_RS05990 PF00271 Helicase conserved C-terminal domain CJD35_RS05990 PF00270 DEAD/DEAH box helicase CJD35_RS06000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS06000 PF00986 DNA gyrase B subunit, carboxyl terminus CJD35_RS06000 PF00204 DNA gyrase B CJD35_RS06000 PF01751 Toprim domain CJD35_RS06025 PF00155 Aminotransferase class I and II CJD35_RS06030 PF01180 Dihydroorotate dehydrogenase CJD35_RS06045 PF01458 Uncharacterized protein family (UPF0051) CJD35_RS06060 PF00005 ABC transporter CJD35_RS06065 PF01458 Uncharacterized protein family (UPF0051) CJD35_RS06070 PF00266 Aminotransferase class-V CJD35_RS06075 PF01883 Iron-sulfur cluster assembly protein CJD35_RS06080 PF01521 Iron-sulphur cluster biosynthesis CJD35_RS06100 PF03232 Ubiquinone biosynthesis protein COQ7 CJD35_RS06110 PF03572 Peptidase family S41 CJD35_RS06110 PF13180 PDZ domain CJD35_RS06120 PF02590 Predicted SPOUT methyltransferase CJD35_RS06130 PF01467 Cytidylyltransferase-like CJD35_RS06140 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJD35_RS06150 PF13360 PQQ-like domain CJD35_RS06150 PF01011 PQQ enzyme repeat CJD35_RS06155 PF00072 Response regulator receiver domain CJD35_RS06155 PF00196 Bacterial regulatory proteins, luxR family CJD35_RS06160 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS06160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS06160 PF00989 PAS fold CJD35_RS06175 PF00171 Aldehyde dehydrogenase family CJD35_RS06180 PF00127 Copper binding proteins, plastocyanin/azurin family CJD35_RS06205 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJD35_RS06205 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJD35_RS06210 PF00941 FAD binding domain in molybdopterin dehydrogenase CJD35_RS06210 PF03450 CO dehydrogenase flavoprotein C-terminal domain CJD35_RS06215 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJD35_RS06215 PF01799 [2Fe-2S] binding domain CJD35_RS06215 PF00111 2Fe-2S iron-sulfur cluster binding domain CJD35_RS06235 PF00296 Luciferase-like monooxygenase CJD35_RS06245 PF00593 TonB dependent receptor CJD35_RS06245 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS06250 PF00364 Biotin-requiring enzyme CJD35_RS06255 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJD35_RS06255 PF02785 Biotin carboxylase C-terminal domain CJD35_RS06255 PF00289 Biotin carboxylase, N-terminal domain CJD35_RS06265 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJD35_RS06265 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain CJD35_RS06265 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJD35_RS06270 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS06275 PF04055 Radical SAM superfamily CJD35_RS06275 PF06968 Biotin and Thiamin Synthesis associated domain CJD35_RS06280 PF03060 Nitronate monooxygenase CJD35_RS06290 PF01144 Coenzyme A transferase CJD35_RS06295 PF01144 Coenzyme A transferase CJD35_RS06300 PF01613 Flavin reductase like domain CJD35_RS06305 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS06310 PF00067 Cytochrome P450 CJD35_RS06330 PF01144 Coenzyme A transferase CJD35_RS06335 PF01144 Coenzyme A transferase CJD35_RS06350 PF00108 Thiolase, N-terminal domain CJD35_RS06350 PF02803 Thiolase, C-terminal domain CJD35_RS06355 PF12697 Alpha/beta hydrolase family CJD35_RS06360 PF13193 AMP-binding enzyme C-terminal domain CJD35_RS06360 PF00501 AMP-binding enzyme CJD35_RS06385 PF00753 Metallo-beta-lactamase superfamily CJD35_RS06390 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS06395 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS06395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS06395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS06400 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS06400 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS06400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS06415 PF01695 IstB-like ATP binding protein CJD35_RS06420 PF00665 Integrase core domain CJD35_RS06425 PF00364 Biotin-requiring enzyme CJD35_RS06425 PF02436 Conserved carboxylase domain CJD35_RS06425 PF00682 HMGL-like CJD35_RS06440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJD35_RS06445 PF01011 PQQ enzyme repeat CJD35_RS06445 PF13360 PQQ-like domain CJD35_RS06450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS06450 PF03466 LysR substrate binding domain CJD35_RS06455 PF05368 NmrA-like family CJD35_RS06460 PF01638 HxlR-like helix-turn-helix CJD35_RS06470 PF02525 Flavodoxin-like fold CJD35_RS06475 PF00111 2Fe-2S iron-sulfur cluster binding domain CJD35_RS06480 PF03928 Haem-degrading CJD35_RS06485 PF00171 Aldehyde dehydrogenase family CJD35_RS06490 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJD35_RS06500 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS06500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS06500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS06510 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation CJD35_RS06510 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJD35_RS06515 PF00682 HMGL-like CJD35_RS06515 PF07836 DmpG-like communication domain CJD35_RS06520 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJD35_RS06530 PF02311 AraC-like ligand binding domain CJD35_RS06530 PF12833 Helix-turn-helix domain CJD35_RS06535 PF06441 Epoxide hydrolase N terminus CJD35_RS06540 PF06441 Epoxide hydrolase N terminus CJD35_RS06550 PF01695 IstB-like ATP binding protein CJD35_RS06555 PF00665 Integrase core domain CJD35_RS06565 PF13181 Tetratricopeptide repeat CJD35_RS06575 PF13614 AAA domain CJD35_RS06590 PF00535 Glycosyl transferase family 2 CJD35_RS06595 PF02397 Bacterial sugar transferase CJD35_RS06600 PF02563 Polysaccharide biosynthesis/export protein CJD35_RS06605 PF03808 Glycosyl transferase WecB/TagA/CpsF family CJD35_RS06625 PF02321 Outer membrane efflux protein CJD35_RS06655 PF01925 Sulfite exporter TauE/SafE CJD35_RS06660 PF00534 Glycosyl transferases group 1 CJD35_RS06675 PF02699 Preprotein translocase subunit CJD35_RS06680 PF02355 Protein export membrane protein CJD35_RS06685 PF07549 SecD/SecF GG Motif CJD35_RS06685 PF02355 Protein export membrane protein CJD35_RS06700 PF01169 Uncharacterized protein family UPF0016 CJD35_RS06710 PF02673 Bacitracin resistance protein BacA CJD35_RS06715 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CJD35_RS06715 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS06725 PF01645 Conserved region in glutamate synthase CJD35_RS06725 PF01493 GXGXG motif CJD35_RS06725 PF00310 Glutamine amidotransferases class-II CJD35_RS06725 PF04898 Glutamate synthase central domain CJD35_RS06755 PF01758 Sodium Bile acid symporter family CJD35_RS06760 PF03960 ArsC family CJD35_RS06775 PF00416 Ribosomal protein S13/S18 CJD35_RS06780 PF00411 Ribosomal protein S11 CJD35_RS06785 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CJD35_RS06785 PF01000 RNA polymerase Rpb3/RpoA insert domain CJD35_RS06785 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CJD35_RS06790 PF01196 Ribosomal protein L17 CJD35_RS06795 PF00326 Prolyl oligopeptidase family CJD35_RS06795 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CJD35_RS06810 PF07690 Major Facilitator Superfamily CJD35_RS06815 PF02540 NAD synthase CJD35_RS06815 PF00117 Glutamine amidotransferase class-I CJD35_RS06815 PF00958 GMP synthase C terminal domain CJD35_RS06825 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS06825 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJD35_RS06825 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJD35_RS06830 PF00501 AMP-binding enzyme CJD35_RS06830 PF13193 AMP-binding enzyme C-terminal domain CJD35_RS06845 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS06855 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS06855 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS06855 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS06865 PF00593 TonB dependent receptor CJD35_RS06865 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS06870 PF07690 Major Facilitator Superfamily CJD35_RS06885 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS06885 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS06885 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS06890 PF00108 Thiolase, N-terminal domain CJD35_RS06890 PF02803 Thiolase, C-terminal domain CJD35_RS06895 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS06895 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS06895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS06900 PF00108 Thiolase, N-terminal domain CJD35_RS06900 PF02803 Thiolase, C-terminal domain CJD35_RS06910 PF00196 Bacterial regulatory proteins, luxR family CJD35_RS06910 PF03472 Autoinducer binding domain CJD35_RS06930 PF00106 short chain dehydrogenase CJD35_RS06955 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS06960 PF00872 Transposase, Mutator family CJD35_RS06965 PF13340 Putative transposase of IS4/5 family (DUF4096) CJD35_RS06970 PF00155 Aminotransferase class I and II CJD35_RS06975 PF02646 RmuC family CJD35_RS06980 PF04116 Fatty acid hydroxylase superfamily CJD35_RS06985 PF05552 Conserved TM helix CJD35_RS06985 PF00924 Mechanosensitive ion channel CJD35_RS06990 PF01053 Cys/Met metabolism PLP-dependent enzyme CJD35_RS06995 PF00581 Rhodanese-like domain CJD35_RS07005 PF14489 QueF-like protein CJD35_RS07010 PF01433 Peptidase family M1 domain CJD35_RS07015 PF02333 Phytase CJD35_RS07030 PF03169 OPT oligopeptide transporter protein CJD35_RS07040 PF08755 Hemimethylated DNA-binding protein YccV like CJD35_RS07060 PF00881 Nitroreductase family CJD35_RS07065 PF01593 Flavin containing amine oxidoreductase CJD35_RS07070 PF01227 GTP cyclohydrolase I CJD35_RS07075 PF00196 Bacterial regulatory proteins, luxR family CJD35_RS07075 PF13426 PAS domain CJD35_RS07095 PF14602 Hexapeptide repeat of succinyl-transferase CJD35_RS07095 PF00132 Bacterial transferase hexapeptide (six repeats) CJD35_RS07095 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CJD35_RS07105 PF03641 Possible lysine decarboxylase CJD35_RS07115 PF00266 Aminotransferase class-V CJD35_RS07120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJD35_RS07120 PF01842 ACT domain CJD35_RS07120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJD35_RS07125 PF13393 Histidyl-tRNA synthetase CJD35_RS07135 PF00709 Adenylosuccinate synthetase CJD35_RS07150 PF00375 Sodium:dicarboxylate symporter family CJD35_RS07155 PF01062 Bestrophin, RFP-TM, chloride channel CJD35_RS07160 PF00375 Sodium:dicarboxylate symporter family CJD35_RS07165 PF01243 Pyridoxamine 5'-phosphate oxidase CJD35_RS07165 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CJD35_RS07175 PF00684 DnaJ central domain CJD35_RS07175 PF01556 DnaJ C terminal domain CJD35_RS07175 PF00226 DnaJ domain CJD35_RS07180 PF03631 Virulence factor BrkB CJD35_RS07200 PF01264 Chorismate synthase CJD35_RS07220 PF03600 Citrate transporter CJD35_RS07220 PF02080 TrkA-C domain CJD35_RS07225 PF02567 Phenazine biosynthesis-like protein CJD35_RS07245 PF01541 GIY-YIG catalytic domain CJD35_RS07250 PF09382 RQC domain CJD35_RS07250 PF00570 HRDC domain CJD35_RS07250 PF16124 RecQ zinc-binding CJD35_RS07250 PF00271 Helicase conserved C-terminal domain CJD35_RS07250 PF00270 DEAD/DEAH box helicase CJD35_RS07270 PF01545 Cation efflux family CJD35_RS07275 PF02583 Metal-sensitive transcriptional repressor CJD35_RS07285 PF01593 Flavin containing amine oxidoreductase CJD35_RS07290 PF03641 Possible lysine decarboxylase CJD35_RS07300 PF00909 Ammonium Transporter Family CJD35_RS07305 PF00543 Nitrogen regulatory protein P-II CJD35_RS07315 PF01523 Putative modulator of DNA gyrase CJD35_RS07335 PF01063 Amino-transferase class IV CJD35_RS07355 PF04963 Sigma-54 factor, core binding domain CJD35_RS07355 PF00309 Sigma-54 factor, Activator interacting domain (AID) CJD35_RS07355 PF04552 Sigma-54, DNA binding domain CJD35_RS07360 PF00005 ABC transporter CJD35_RS07365 PF01037 Lrp/AsnC ligand binding domain CJD35_RS07370 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CJD35_RS07375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJD35_RS07380 PF04209 homogentisate 1,2-dioxygenase CJD35_RS07385 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJD35_RS07395 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain CJD35_RS07395 PF04616 Glycosyl hydrolases family 43 CJD35_RS07400 PF04616 Glycosyl hydrolases family 43 CJD35_RS07405 PF06964 Alpha-L-arabinofuranosidase C-terminal domain CJD35_RS07410 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJD35_RS07420 PF07729 FCD domain CJD35_RS07420 PF00392 Bacterial regulatory proteins, gntR family CJD35_RS07425 PF07690 Major Facilitator Superfamily CJD35_RS07430 PF01263 Aldose 1-epimerase CJD35_RS07435 PF08450 SMP-30/Gluconolactonase/LRE-like region CJD35_RS07440 PF12848 ABC transporter CJD35_RS07440 PF00005 ABC transporter CJD35_RS07450 PF01406 tRNA synthetases class I (C) catalytic domain CJD35_RS07455 PF01027 Inhibitor of apoptosis-promoting Bax1 CJD35_RS07470 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CJD35_RS07470 PF00476 DNA polymerase family A CJD35_RS07470 PF01367 5'-3' exonuclease, C-terminal SAM fold CJD35_RS07470 PF01612 3'-5' exonuclease CJD35_RS07495 PF00005 ABC transporter CJD35_RS07500 PF00551 Formyl transferase CJD35_RS07505 PF00586 AIR synthase related protein, N-terminal domain CJD35_RS07505 PF02769 AIR synthase related protein, C-terminal domain CJD35_RS07520 PF02503 Polyphosphate kinase middle domain CJD35_RS07520 PF13090 Polyphosphate kinase C-terminal domain 2 CJD35_RS07520 PF13089 Polyphosphate kinase N-terminal domain CJD35_RS07520 PF17941 Polyphosphate kinase C-terminal domain 1 CJD35_RS07525 PF02541 Ppx/GppA phosphatase family CJD35_RS07535 PF00696 Amino acid kinase family CJD35_RS07545 PF02325 YGGT family CJD35_RS07550 PF02594 Uncharacterised ACR, YggU family COG1872 CJD35_RS07555 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJD35_RS07555 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJD35_RS07565 PF01914 MarC family integral membrane protein CJD35_RS07570 PF05736 OprF membrane domain CJD35_RS07570 PF00691 OmpA family CJD35_RS07575 PF01595 Cyclin M transmembrane N-terminal domain CJD35_RS07575 PF03471 Transporter associated domain CJD35_RS07575 PF00571 CBS domain CJD35_RS07590 PF00034 Cytochrome c CJD35_RS07595 PF00800 Prephenate dehydratase CJD35_RS07595 PF01817 Chorismate mutase type II CJD35_RS07595 PF01842 ACT domain CJD35_RS07615 PF00085 Thioredoxin CJD35_RS07620 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJD35_RS07620 PF05362 Lon protease (S16) C-terminal proteolytic domain CJD35_RS07620 PF00004 ATPase family associated with various cellular activities (AAA) CJD35_RS07625 PF03966 Trm112p-like protein CJD35_RS07630 PF01042 Endoribonuclease L-PSP CJD35_RS07635 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS07635 PF00593 TonB dependent receptor CJD35_RS07640 PF08534 Redoxin CJD35_RS07645 PF00206 Lyase CJD35_RS07645 PF14698 Argininosuccinate lyase C-terminal CJD35_RS07655 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJD35_RS07655 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJD35_RS07660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJD35_RS07660 PF10414 Sirohaem synthase dimerisation region CJD35_RS07660 PF14824 Sirohaem biosynthesis protein central CJD35_RS07665 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS07665 PF00072 Response regulator receiver domain CJD35_RS07680 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS07680 PF00072 Response regulator receiver domain CJD35_RS07685 PF08360 QacR-like protein, C-terminal region CJD35_RS07685 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS07690 PF02321 Outer membrane efflux protein CJD35_RS07695 PF13533 Biotin-lipoyl like CJD35_RS07700 PF07690 Major Facilitator Superfamily CJD35_RS07705 PF12804 MobA-like NTP transferase domain CJD35_RS07720 PF00037 4Fe-4S binding domain CJD35_RS07720 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJD35_RS07720 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJD35_RS07725 PF01568 Molydopterin dinucleotide binding domain CJD35_RS07725 PF00384 Molybdopterin oxidoreductase CJD35_RS07725 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJD35_RS07725 PF00037 4Fe-4S binding domain CJD35_RS07725 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJD35_RS07735 PF02634 FdhD/NarQ family CJD35_RS07740 PF00593 TonB dependent receptor CJD35_RS07740 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS07750 PF01032 FecCD transport family CJD35_RS07755 PF00005 ABC transporter CJD35_RS07765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJD35_RS07770 PF02021 Uncharacterised protein family UPF0102 CJD35_RS07775 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CJD35_RS07775 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CJD35_RS07780 PF09335 SNARE associated Golgi protein CJD35_RS07785 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS07785 PF00589 Phage integrase family CJD35_RS07795 PF02445 Quinolinate synthetase A protein CJD35_RS07800 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CJD35_RS07800 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CJD35_RS07815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJD35_RS07820 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS07820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS07820 PF13755 Sensor N-terminal transmembrane domain CJD35_RS07820 PF13756 Stimulus-sensing domain CJD35_RS07820 PF00672 HAMP domain CJD35_RS07825 PF00072 Response regulator receiver domain CJD35_RS07825 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS07830 PF01293 Phosphoenolpyruvate carboxykinase CJD35_RS07840 PF00970 Oxidoreductase FAD-binding domain CJD35_RS07840 PF00175 Oxidoreductase NAD-binding domain CJD35_RS07855 PF00672 HAMP domain CJD35_RS07855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJD35_RS07865 PF01145 SPFH domain / Band 7 family CJD35_RS07865 PF16200 C-terminal region of band_7 CJD35_RS07870 PF03328 HpcH/HpaI aldolase/citrate lyase family CJD35_RS07880 PF09924 Uncharacterised conserved protein (DUF2156) CJD35_RS07880 PF03706 Lysylphosphatidylglycerol synthase TM region CJD35_RS07900 PF00072 Response regulator receiver domain CJD35_RS07900 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS07905 PF00672 HAMP domain CJD35_RS07905 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS07905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS07915 PF03781 Sulfatase-modifying factor enzyme 1 CJD35_RS07920 PF00884 Sulfatase CJD35_RS07925 PF00884 Sulfatase CJD35_RS07925 PF16347 Domain of unknown function (DUF4976) CJD35_RS07930 PF00884 Sulfatase CJD35_RS07935 PF07690 Major Facilitator Superfamily CJD35_RS07940 PF00593 TonB dependent receptor CJD35_RS07940 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS07945 PF00933 Glycosyl hydrolase family 3 N terminal domain CJD35_RS07950 PF07883 Cupin domain CJD35_RS07955 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJD35_RS07960 PF13417 Glutathione S-transferase, N-terminal domain CJD35_RS07965 PF00356 Bacterial regulatory proteins, lacI family CJD35_RS07970 PF00884 Sulfatase CJD35_RS07975 PF00933 Glycosyl hydrolase family 3 N terminal domain CJD35_RS07980 PF00593 TonB dependent receptor CJD35_RS07980 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS07985 PF00356 Bacterial regulatory proteins, lacI family CJD35_RS07990 PF00884 Sulfatase CJD35_RS07990 PF16347 Domain of unknown function (DUF4976) CJD35_RS08000 PF00884 Sulfatase CJD35_RS08005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS08005 PF03466 LysR substrate binding domain CJD35_RS08010 PF01168 Alanine racemase, N-terminal domain CJD35_RS08010 PF14031 Putative serine dehydratase domain CJD35_RS08015 PF01042 Endoribonuclease L-PSP CJD35_RS08025 PF01266 FAD dependent oxidoreductase CJD35_RS08030 PF00171 Aldehyde dehydrogenase family CJD35_RS08040 PF09423 PhoD-like phosphatase CJD35_RS08040 PF16655 PhoD-like phosphatase, N-terminal domain CJD35_RS08045 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS08045 PF00593 TonB dependent receptor CJD35_RS08060 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJD35_RS08060 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJD35_RS08070 PF00072 Response regulator receiver domain CJD35_RS08070 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS08075 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS08075 PF00672 HAMP domain CJD35_RS08090 PF13091 PLD-like domain CJD35_RS08095 PF01192 RNA polymerase Rpb6 CJD35_RS08105 PF03167 Uracil DNA glycosylase superfamily CJD35_RS08135 PF01370 NAD dependent epimerase/dehydratase family CJD35_RS08140 PF01380 SIS domain CJD35_RS08140 PF00571 CBS domain CJD35_RS08145 PF02348 Cytidylyltransferase CJD35_RS08150 PF00300 Histidine phosphatase superfamily (branch 1) CJD35_RS08170 PF00313 'Cold-shock' DNA-binding domain CJD35_RS08180 PF09856 Predicted transcriptional regulator (DUF2083) CJD35_RS08180 PF06114 IrrE N-terminal-like domain CJD35_RS08180 PF01381 Helix-turn-helix CJD35_RS08190 PF01384 Phosphate transporter family CJD35_RS08195 PF01865 Protein of unknown function DUF47 CJD35_RS08200 PF03466 LysR substrate binding domain CJD35_RS08200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS08225 PF00764 Arginosuccinate synthase CJD35_RS08230 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJD35_RS08230 PF13426 PAS domain CJD35_RS08230 PF08447 PAS fold CJD35_RS08240 PF00072 Response regulator receiver domain CJD35_RS08240 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS08245 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS08245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS08245 PF00672 HAMP domain CJD35_RS08250 PF01594 AI-2E family transporter CJD35_RS08255 PF10502 Signal peptidase, peptidase S26 CJD35_RS08260 PF01648 4'-phosphopantetheinyl transferase superfamily CJD35_RS08265 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CJD35_RS08270 PF00156 Phosphoribosyl transferase domain CJD35_RS08275 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CJD35_RS08275 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CJD35_RS08280 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJD35_RS08285 PF01040 UbiA prenyltransferase family CJD35_RS08290 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CJD35_RS08295 PF00510 Cytochrome c oxidase subunit III CJD35_RS08310 PF00291 Pyridoxal-phosphate dependent enzyme CJD35_RS08310 PF14821 Threonine synthase N terminus CJD35_RS08330 PF01979 Amidohydrolase family CJD35_RS08335 PF00892 EamA-like transporter family CJD35_RS08350 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CJD35_RS08355 PF00849 RNA pseudouridylate synthase CJD35_RS08355 PF01479 S4 domain CJD35_RS08360 PF13419 Haloacid dehalogenase-like hydrolase CJD35_RS08395 PF00850 Histone deacetylase domain CJD35_RS08405 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CJD35_RS08415 PF00977 Histidine biosynthesis protein CJD35_RS08420 PF00977 Histidine biosynthesis protein CJD35_RS08425 PF00117 Glutamine amidotransferase class-I CJD35_RS08430 PF00475 Imidazoleglycerol-phosphate dehydratase CJD35_RS08460 PF00206 Lyase CJD35_RS08460 PF10415 Fumarase C C-terminus CJD35_RS08470 PF10755 Protein of unknown function (DUF2585) CJD35_RS08475 PF00625 Guanylate kinase CJD35_RS08485 PF01790 Prolipoprotein diacylglyceryl transferase CJD35_RS08495 PF01728 FtsJ-like methyltransferase CJD35_RS08500 PF13335 Magnesium chelatase, subunit ChlI C-terminal CJD35_RS08500 PF01078 Magnesium chelatase, subunit ChlI CJD35_RS08515 PF01551 Peptidase family M23 CJD35_RS08515 PF01476 LysM domain CJD35_RS08515 PF08525 Opacity-associated protein A N-terminal motif CJD35_RS08520 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS08520 PF03707 Bacterial signalling protein N terminal repeat CJD35_RS08520 PF00563 EAL domain CJD35_RS08520 PF13188 PAS domain CJD35_RS08525 PF00164 Ribosomal protein S12/S23 CJD35_RS08530 PF00177 Ribosomal protein S7p/S5e CJD35_RS08535 PF00009 Elongation factor Tu GTP binding domain CJD35_RS08535 PF03144 Elongation factor Tu domain 2 CJD35_RS08535 PF00679 Elongation factor G C-terminus CJD35_RS08535 PF14492 Elongation Factor G, domain II CJD35_RS08535 PF03764 Elongation factor G, domain IV CJD35_RS08540 PF03143 Elongation factor Tu C-terminal domain CJD35_RS08540 PF03144 Elongation factor Tu domain 2 CJD35_RS08540 PF00009 Elongation factor Tu GTP binding domain CJD35_RS08545 PF00338 Ribosomal protein S10p/S20e CJD35_RS08550 PF00297 Ribosomal protein L3 CJD35_RS08555 PF00573 Ribosomal protein L4/L1 family CJD35_RS08560 PF00276 Ribosomal protein L23 CJD35_RS08565 PF00181 Ribosomal Proteins L2, RNA binding domain CJD35_RS08565 PF03947 Ribosomal Proteins L2, C-terminal domain CJD35_RS08570 PF00203 Ribosomal protein S19 CJD35_RS08575 PF00237 Ribosomal protein L22p/L17e CJD35_RS08580 PF07650 KH domain CJD35_RS08580 PF00189 Ribosomal protein S3, C-terminal domain CJD35_RS08585 PF00252 Ribosomal protein L16p/L10e CJD35_RS08590 PF00831 Ribosomal L29 protein CJD35_RS08595 PF00366 Ribosomal protein S17 CJD35_RS08600 PF00238 Ribosomal protein L14p/L23e CJD35_RS08605 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CJD35_RS08605 PF00467 KOW motif CJD35_RS08610 PF00673 ribosomal L5P family C-terminus CJD35_RS08610 PF00281 Ribosomal protein L5 CJD35_RS08615 PF00253 Ribosomal protein S14p/S29e CJD35_RS08620 PF00410 Ribosomal protein S8 CJD35_RS08625 PF00347 Ribosomal protein L6 CJD35_RS08630 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CJD35_RS08635 PF00333 Ribosomal protein S5, N-terminal domain CJD35_RS08635 PF03719 Ribosomal protein S5, C-terminal domain CJD35_RS08640 PF00327 Ribosomal protein L30p/L7e CJD35_RS08645 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CJD35_RS08650 PF00344 SecY translocase CJD35_RS08655 PF05191 Adenylate kinase, active site lid CJD35_RS08675 PF03144 Elongation factor Tu domain 2 CJD35_RS08675 PF00679 Elongation factor G C-terminus CJD35_RS08675 PF00009 Elongation factor Tu GTP binding domain CJD35_RS08675 PF06421 GTP-binding protein LepA C-terminus CJD35_RS08685 PF13614 AAA domain CJD35_RS08695 PF00872 Transposase, Mutator family CJD35_RS08745 PF00849 RNA pseudouridylate synthase CJD35_RS08755 PF01474 Class-II DAHP synthetase family CJD35_RS08785 PF00425 chorismate binding enzyme CJD35_RS08785 PF04715 Anthranilate synthase component I, N terminal region CJD35_RS08795 PF00155 Aminotransferase class I and II CJD35_RS08800 PF01625 Peptide methionine sulfoxide reductase CJD35_RS08810 PF05198 Translation initiation factor IF-3, N-terminal domain CJD35_RS08810 PF00707 Translation initiation factor IF-3, C-terminal domain CJD35_RS08815 PF03129 Anticodon binding domain CJD35_RS08815 PF02824 TGS domain CJD35_RS08815 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJD35_RS08815 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJD35_RS08825 PF00899 ThiF family CJD35_RS08835 PF00692 dUTPase CJD35_RS08840 PF04127 DNA / pantothenate metabolism flavoprotein CJD35_RS08840 PF02441 Flavoprotein CJD35_RS08855 PF03109 ABC1 family CJD35_RS08860 PF01209 ubiE/COQ5 methyltransferase family CJD35_RS08865 PF06827 Zinc finger found in FPG and IleRS CJD35_RS08865 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CJD35_RS08865 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CJD35_RS08870 PF01649 Ribosomal protein S20 CJD35_RS08875 PF00308 Bacterial dnaA protein CJD35_RS08875 PF08299 Bacterial dnaA protein helix-turn-helix CJD35_RS08875 PF11638 DnaA N-terminal domain CJD35_RS08885 PF00375 Sodium:dicarboxylate symporter family CJD35_RS08895 PF00579 tRNA synthetases class I (W and Y) CJD35_RS08900 PF03023 Lipid II flippase MurJ CJD35_RS08905 PF02556 Preprotein translocase subunit SecB CJD35_RS08925 PF00563 EAL domain CJD35_RS08925 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS08925 PF03707 Bacterial signalling protein N terminal repeat CJD35_RS08930 PF01546 Peptidase family M20/M25/M40 CJD35_RS08930 PF07687 Peptidase dimerisation domain CJD35_RS08940 PF17676 LD-carboxypeptidase C-terminal domain CJD35_RS08940 PF02016 LD-carboxypeptidase N-terminal domain CJD35_RS08950 PF01507 Phosphoadenosine phosphosulfate reductase family CJD35_RS08955 PF00009 Elongation factor Tu GTP binding domain CJD35_RS08960 PF00459 Inositol monophosphatase family CJD35_RS08975 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CJD35_RS09000 PF00501 AMP-binding enzyme CJD35_RS09005 PF00563 EAL domain CJD35_RS09005 PF08447 PAS fold CJD35_RS09005 PF08448 PAS fold CJD35_RS09005 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS09010 PF13614 AAA domain CJD35_RS09015 PF03960 ArsC family CJD35_RS09020 PF02785 Biotin carboxylase C-terminal domain CJD35_RS09020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJD35_RS09020 PF00289 Biotin carboxylase, N-terminal domain CJD35_RS09025 PF00364 Biotin-requiring enzyme CJD35_RS09030 PF01220 Dehydroquinase class II CJD35_RS09035 PF05690 Thiazole biosynthesis protein ThiG CJD35_RS09040 PF01144 Coenzyme A transferase CJD35_RS09050 PF01144 Coenzyme A transferase CJD35_RS09055 PF01230 HIT domain CJD35_RS09060 PF13439 Glycosyltransferase Family 4 CJD35_RS09065 PF05159 Capsule polysaccharide biosynthesis protein CJD35_RS09070 PF05159 Capsule polysaccharide biosynthesis protein CJD35_RS09085 PF13439 Glycosyltransferase Family 4 CJD35_RS09085 PF00534 Glycosyl transferases group 1 CJD35_RS09100 PF00293 NUDIX domain CJD35_RS09120 PF01741 Large-conductance mechanosensitive channel, MscL CJD35_RS09130 PF01584 CheW-like domain CJD35_RS09130 PF00072 Response regulator receiver domain CJD35_RS09130 PF01627 Hpt domain CJD35_RS09130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS09130 PF02895 Signal transducing histidine kinase, homodimeric domain CJD35_RS09140 PF00072 Response regulator receiver domain CJD35_RS09145 PF00072 Response regulator receiver domain CJD35_RS09145 PF01339 CheB methylesterase CJD35_RS09150 PF03705 CheR methyltransferase, all-alpha domain CJD35_RS09150 PF01739 CheR methyltransferase, SAM binding domain CJD35_RS09155 PF01510 N-acetylmuramoyl-L-alanine amidase CJD35_RS09165 PF01556 DnaJ C terminal domain CJD35_RS09165 PF00226 DnaJ domain CJD35_RS09165 PF00684 DnaJ central domain CJD35_RS09180 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJD35_RS09180 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJD35_RS09185 PF04279 Intracellular septation protein A CJD35_RS09190 PF02881 SRP54-type protein, helical bundle domain CJD35_RS09190 PF00448 SRP54-type protein, GTPase domain CJD35_RS09195 PF00919 Uncharacterized protein family UPF0004 CJD35_RS09195 PF04055 Radical SAM superfamily CJD35_RS09200 PF01678 Diaminopimelate epimerase CJD35_RS09210 PF13520 Amino acid permease CJD35_RS09220 PF02978 Signal peptide binding domain CJD35_RS09220 PF02881 SRP54-type protein, helical bundle domain CJD35_RS09220 PF00448 SRP54-type protein, GTPase domain CJD35_RS09225 PF00886 Ribosomal protein S16 CJD35_RS09230 PF05239 PRC-barrel domain CJD35_RS09230 PF01782 RimM N-terminal domain CJD35_RS09250 PF01746 tRNA (Guanine-1)-methyltransferase CJD35_RS09255 PF01245 Ribosomal protein L19 CJD35_RS09260 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS09260 PF00593 TonB dependent receptor CJD35_RS09275 PF07690 Major Facilitator Superfamily CJD35_RS09275 PF00083 Sugar (and other) transporter CJD35_RS09280 PF00588 SpoU rRNA Methylase family CJD35_RS09280 PF08032 RNA 2'-O ribose methyltransferase substrate binding CJD35_RS09285 PF01594 AI-2E family transporter CJD35_RS09290 PF00381 PTS HPr component phosphorylation site CJD35_RS09295 PF03610 PTS system fructose IIA component CJD35_RS09295 PF03830 PTS system sorbose subfamily IIB component CJD35_RS09300 PF03668 P-loop ATPase protein family CJD35_RS09305 PF02603 HPr Serine kinase N terminus CJD35_RS09305 PF07475 HPr Serine kinase C-terminal domain CJD35_RS09315 PF16320 Ribosomal protein L7/L12 dimerisation domain CJD35_RS09315 PF00542 Ribosomal protein L7/L12 C-terminal domain CJD35_RS09320 PF00466 Ribosomal protein L10 CJD35_RS09325 PF02824 TGS domain CJD35_RS09325 PF04607 Region found in RelA / SpoT proteins CJD35_RS09325 PF13291 ACT domain CJD35_RS09330 PF01638 HxlR-like helix-turn-helix CJD35_RS09335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS09335 PF07694 5TMR of 5TMR-LYT CJD35_RS09335 PF06580 Histidine kinase CJD35_RS09340 PF00072 Response regulator receiver domain CJD35_RS09340 PF04397 LytTr DNA-binding domain CJD35_RS09360 PF14437 MafB19-like deaminase CJD35_RS09370 PF00830 Ribosomal L28 family CJD35_RS09395 PF01022 Bacterial regulatory protein, arsR family CJD35_RS09400 PF02219 Methylenetetrahydrofolate reductase CJD35_RS09405 PF00809 Pterin binding enzyme CJD35_RS09405 PF02310 B12 binding domain CJD35_RS09405 PF02607 B12 binding domain CJD35_RS09405 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJD35_RS09405 PF02574 Homocysteine S-methyltransferase CJD35_RS09410 PF02607 B12 binding domain CJD35_RS09410 PF02574 Homocysteine S-methyltransferase CJD35_RS09410 PF02310 B12 binding domain CJD35_RS09410 PF00809 Pterin binding enzyme CJD35_RS09410 PF02965 Vitamin B12 dependent methionine synthase, activation domain CJD35_RS09415 PF18331 PKHD-type hydroxylase C-terminal domain CJD35_RS09415 PF13640 2OG-Fe(II) oxygenase superfamily CJD35_RS09420 PF00155 Aminotransferase class I and II CJD35_RS09425 PF00155 Aminotransferase class I and II CJD35_RS09430 PF00391 PEP-utilising enzyme, mobile domain CJD35_RS09430 PF02896 PEP-utilising enzyme, TIM barrel domain CJD35_RS09430 PF05524 PEP-utilising enzyme, N-terminal CJD35_RS09435 PF13464 Domain of unknown function (DUF4115) CJD35_RS09445 PF01171 PP-loop family CJD35_RS09455 PF17862 AAA+ lid domain CJD35_RS09455 PF00004 ATPase family associated with various cellular activities (AAA) CJD35_RS09455 PF01434 Peptidase family M41 CJD35_RS09460 PF00478 IMP dehydrogenase / GMP reductase domain CJD35_RS09460 PF00571 CBS domain CJD35_RS09465 PF01189 16S rRNA methyltransferase RsmB/F CJD35_RS09465 PF01029 NusB family CJD35_RS09475 PF00398 Ribosomal RNA adenine dimethylase CJD35_RS09480 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CJD35_RS09485 PF00639 PPIC-type PPIASE domain CJD35_RS09485 PF09312 SurA N-terminal domain CJD35_RS09490 PF04453 LPS transport system D CJD35_RS09495 PF02789 Cytosol aminopeptidase family, N-terminal domain CJD35_RS09495 PF00883 Cytosol aminopeptidase family, catalytic domain CJD35_RS09505 PF00334 Nucleoside diphosphate kinase CJD35_RS09600 PF02321 Outer membrane efflux protein CJD35_RS09615 PF08264 Anticodon-binding domain of tRNA CJD35_RS09615 PF00133 tRNA synthetases class I (I, L, M and V) CJD35_RS09615 PF10458 Valyl tRNA synthetase tRNA binding arm CJD35_RS09620 PF01554 MatE CJD35_RS09630 PF01757 Acyltransferase family CJD35_RS09635 PF00296 Luciferase-like monooxygenase CJD35_RS09650 PF01926 50S ribosome-binding GTPase CJD35_RS09650 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CJD35_RS09655 PF13360 PQQ-like domain CJD35_RS09665 PF02548 Ketopantoate hydroxymethyltransferase CJD35_RS09670 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS09670 PF00593 TonB dependent receptor CJD35_RS09690 PF02566 OsmC-like protein CJD35_RS09695 PF00892 EamA-like transporter family CJD35_RS09705 PF00437 Type II/IV secretion system protein CJD35_RS09715 PF00535 Glycosyl transferase family 2 CJD35_RS09735 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CJD35_RS09740 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJD35_RS09740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJD35_RS09745 PF00231 ATP synthase CJD35_RS09750 PF00306 ATP synthase alpha/beta chain, C terminal domain CJD35_RS09750 PF02874 ATP synthase alpha/beta family, beta-barrel domain CJD35_RS09750 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CJD35_RS09755 PF00213 ATP synthase delta (OSCP) subunit CJD35_RS09760 PF02674 Colicin V production protein CJD35_RS09765 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CJD35_RS09765 PF12833 Helix-turn-helix domain CJD35_RS09765 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CJD35_RS09765 PF02805 Metal binding domain of Ada CJD35_RS09780 PF00270 DEAD/DEAH box helicase CJD35_RS09780 PF17764 3′ DNA-binding domain (3′BD) CJD35_RS09780 PF18074 Primosomal protein N C-terminal domain CJD35_RS09780 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CJD35_RS09790 PF00923 Transaldolase/Fructose-6-phosphate aldolase CJD35_RS09805 PF01416 tRNA pseudouridine synthase CJD35_RS09810 PF02911 Formyl transferase, C-terminal domain CJD35_RS09810 PF00551 Formyl transferase CJD35_RS09815 PF02132 RecR protein CJD35_RS09815 PF13662 Toprim domain CJD35_RS09820 PF01327 Polypeptide deformylase CJD35_RS09825 PF00072 Response regulator receiver domain CJD35_RS09825 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS09830 PF01895 PhoU domain CJD35_RS09835 PF00005 ABC transporter CJD35_RS09840 PF00528 Binding-protein-dependent transport system inner membrane component CJD35_RS09845 PF00528 Binding-protein-dependent transport system inner membrane component CJD35_RS09855 PF16736 Single Cache-like CJD35_RS09855 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS09855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS09855 PF00989 PAS fold CJD35_RS09880 PF01546 Peptidase family M20/M25/M40 CJD35_RS09880 PF07687 Peptidase dimerisation domain CJD35_RS09925 PF00578 AhpC/TSA family CJD35_RS09930 PF04305 Protein of unknown function (DUF455) CJD35_RS09935 PF10145 Phage-related minor tail protein CJD35_RS09935 PF01551 Peptidase family M23 CJD35_RS09935 PF01464 Transglycosylase SLT domain CJD35_RS09940 PF01521 Iron-sulphur cluster biosynthesis CJD35_RS09985 PF00781 Diacylglycerol kinase catalytic domain CJD35_RS09990 PF00149 Calcineurin-like phosphoesterase CJD35_RS10000 PF08241 Methyltransferase domain CJD35_RS10010 PF00462 Glutaredoxin CJD35_RS10015 PF00795 Carbon-nitrogen hydrolase CJD35_RS10095 PF01544 CorA-like Mg2+ transporter protein CJD35_RS10105 PF00072 Response regulator receiver domain CJD35_RS10105 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS10110 PF00484 Carbonic anhydrase CJD35_RS10125 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS10125 PF00072 Response regulator receiver domain CJD35_RS10130 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS10130 PF16527 Two-component sensor protein CpxA, periplasmic domain CJD35_RS10130 PF00672 HAMP domain CJD35_RS10130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS10135 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase CJD35_RS10145 PF01479 S4 domain CJD35_RS10145 PF01728 FtsJ-like methyltransferase CJD35_RS10150 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJD35_RS10150 PF00529 HlyD membrane-fusion protein of T1SS CJD35_RS10155 PF00873 AcrB/AcrD/AcrF family CJD35_RS10160 PF03073 TspO/MBR family CJD35_RS10175 PF03807 NADP oxidoreductase coenzyme F420-dependent CJD35_RS10175 PF14748 Pyrroline-5-carboxylate reductase dimerisation CJD35_RS10180 PF17763 Glutaminase/Asparaginase C-terminal domain CJD35_RS10180 PF00710 Asparaginase, N-terminal CJD35_RS10190 PF02559 CarD-like/TRCF domain CJD35_RS10195 PF00037 4Fe-4S binding domain CJD35_RS10195 PF11953 Domain of unknown function (DUF3470) CJD35_RS10210 PF04225 Opacity-associated protein A LysM-like domain CJD35_RS10210 PF01551 Peptidase family M23 CJD35_RS10220 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS10220 PF03707 Bacterial signalling protein N terminal repeat CJD35_RS10220 PF13188 PAS domain CJD35_RS10220 PF00563 EAL domain CJD35_RS10240 PF05532 CsbD-like CJD35_RS10245 PF01235 Sodium:alanine symporter family CJD35_RS10250 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJD35_RS10250 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJD35_RS10250 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJD35_RS10250 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJD35_RS10255 PF06906 Protein of unknown function (DUF1272) CJD35_RS10260 PF02581 Thiamine monophosphate synthase CJD35_RS10260 PF03070 TENA/THI-4/PQQC family CJD35_RS10260 PF08543 Phosphomethylpyrimidine kinase CJD35_RS10265 PF01351 Ribonuclease HII CJD35_RS10295 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJD35_RS10295 PF00578 AhpC/TSA family CJD35_RS10300 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS10300 PF13977 BetI-type transcriptional repressor, C-terminal CJD35_RS10305 PF00075 RNase H CJD35_RS10310 PF01636 Phosphotransferase enzyme family CJD35_RS10315 PF02401 LytB protein CJD35_RS10335 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS10335 PF02909 Tetracyclin repressor-like, C-terminal domain CJD35_RS10340 PF00355 Rieske [2Fe-2S] domain CJD35_RS10345 PF00933 Glycosyl hydrolase family 3 N terminal domain CJD35_RS10350 PF02616 Segregation and condensation protein ScpA CJD35_RS10355 PF04079 Segregation and condensation complex subunit ScpB CJD35_RS10360 PF02416 mttA/Hcf106 family CJD35_RS10365 PF02416 mttA/Hcf106 family CJD35_RS10370 PF00902 Sec-independent protein translocase protein (TatC) CJD35_RS10380 PF07486 Cell Wall Hydrolase CJD35_RS10380 PF01471 Putative peptidoglycan binding domain CJD35_RS10385 PF00291 Pyridoxal-phosphate dependent enzyme CJD35_RS10405 PF01795 MraW methylase family CJD35_RS10415 PF00905 Penicillin binding protein transpeptidase domain CJD35_RS10415 PF03717 Penicillin-binding Protein dimerisation domain CJD35_RS10420 PF02875 Mur ligase family, glutamate ligase domain CJD35_RS10420 PF01225 Mur ligase family, catalytic domain CJD35_RS10420 PF08245 Mur ligase middle domain CJD35_RS10425 PF01225 Mur ligase family, catalytic domain CJD35_RS10425 PF02875 Mur ligase family, glutamate ligase domain CJD35_RS10425 PF08245 Mur ligase middle domain CJD35_RS10430 PF00953 Glycosyl transferase family 4 CJD35_RS10435 PF08245 Mur ligase middle domain CJD35_RS10435 PF02875 Mur ligase family, glutamate ligase domain CJD35_RS10440 PF01098 Cell cycle protein CJD35_RS10445 PF04101 Glycosyltransferase family 28 C-terminal domain CJD35_RS10445 PF03033 Glycosyltransferase family 28 N-terminal domain CJD35_RS10450 PF08245 Mur ligase middle domain CJD35_RS10450 PF01225 Mur ligase family, catalytic domain CJD35_RS10450 PF02875 Mur ligase family, glutamate ligase domain CJD35_RS10460 PF01565 FAD binding domain CJD35_RS10460 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CJD35_RS10465 PF07478 D-ala D-ala ligase C-terminus CJD35_RS10465 PF01820 D-ala D-ala ligase N-terminus CJD35_RS10470 PF03799 Cell division protein FtsQ CJD35_RS10470 PF08478 POTRA domain, FtsQ-type CJD35_RS10475 PF02491 SHS2 domain inserted in FTSA CJD35_RS10480 PF12327 FtsZ family, C-terminal domain CJD35_RS10480 PF00091 Tubulin/FtsZ family, GTPase domain CJD35_RS10490 PF01966 HD domain CJD35_RS10490 PF13286 Phosphohydrolase-associated domain CJD35_RS10495 PF08669 Glycine cleavage T-protein C-terminal barrel domain CJD35_RS10495 PF01571 Aminomethyltransferase folate-binding domain CJD35_RS10500 PF01597 Glycine cleavage H-protein CJD35_RS10505 PF02347 Glycine cleavage system P-protein CJD35_RS10510 PF00266 Aminotransferase class-V CJD35_RS10525 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS10525 PF00072 Response regulator receiver domain CJD35_RS10525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS10525 PF13188 PAS domain CJD35_RS10525 PF08448 PAS fold CJD35_RS10530 PF00155 Aminotransferase class I and II CJD35_RS10545 PF00270 DEAD/DEAH box helicase CJD35_RS10545 PF00271 Helicase conserved C-terminal domain CJD35_RS10545 PF04408 Helicase associated domain (HA2) CJD35_RS10545 PF08482 ATP-dependent helicase C-terminal CJD35_RS10550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS10550 PF00072 Response regulator receiver domain CJD35_RS10550 PF13426 PAS domain CJD35_RS10555 PF01925 Sulfite exporter TauE/SafE CJD35_RS10560 PF00348 Polyprenyl synthetase CJD35_RS10565 PF02153 Prephenate dehydrogenase CJD35_RS10565 PF01817 Chorismate mutase type II CJD35_RS10575 PF03379 CcmB protein CJD35_RS10580 PF00005 ABC transporter CJD35_RS10590 PF01329 Pterin 4 alpha carbinolamine dehydratase CJD35_RS10600 PF11856 Protein of unknown function (DUF3376) CJD35_RS10600 PF11856 Protein of unknown function (DUF3376) CJD35_RS10600 PF01734 Patatin-like phospholipase CJD35_RS10600 PF01734 Patatin-like phospholipase CJD35_RS10610 PF06745 KaiC CJD35_RS10610 PF18073 Rubredoxin metal binding domain CJD35_RS10620 PF01370 NAD dependent epimerase/dehydratase family CJD35_RS10625 PF00696 Amino acid kinase family CJD35_RS10625 PF01472 PUA domain CJD35_RS10630 PF01926 50S ribosome-binding GTPase CJD35_RS10630 PF01018 GTP1/OBG CJD35_RS10660 PF01016 Ribosomal L27 protein CJD35_RS10665 PF00829 Ribosomal prokaryotic L21 protein CJD35_RS10675 PF02254 TrkA-N domain CJD35_RS10675 PF00999 Sodium/hydrogen exchanger family CJD35_RS10680 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CJD35_RS10685 PF00270 DEAD/DEAH box helicase CJD35_RS10685 PF00271 Helicase conserved C-terminal domain CJD35_RS10690 PF00687 Ribosomal protein L1p/L10e family CJD35_RS10695 PF03946 Ribosomal protein L11, N-terminal domain CJD35_RS10695 PF00298 Ribosomal protein L11, RNA binding domain CJD35_RS10700 PF00467 KOW motif CJD35_RS10700 PF02357 Transcription termination factor nusG CJD35_RS10715 PF03631 Virulence factor BrkB CJD35_RS10720 PF01979 Amidohydrolase family CJD35_RS10725 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CJD35_RS10725 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CJD35_RS10735 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJD35_RS10735 PF00355 Rieske [2Fe-2S] domain CJD35_RS10740 PF13593 SBF-like CPA transporter family (DUF4137) CJD35_RS10745 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS10760 PF12802 MarR family CJD35_RS10775 PF00665 Integrase core domain CJD35_RS10780 PF01695 IstB-like ATP binding protein CJD35_RS10795 PF05088 Bacterial NAD-glutamate dehydrogenase CJD35_RS10800 PF17755 UvrA DNA-binding domain CJD35_RS10800 PF17760 UvrA interaction domain CJD35_RS10815 PF04397 LytTr DNA-binding domain CJD35_RS10815 PF00072 Response regulator receiver domain CJD35_RS10820 PF00672 HAMP domain CJD35_RS10820 PF06580 Histidine kinase CJD35_RS10820 PF02743 Cache domain CJD35_RS10820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS10840 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CJD35_RS10850 PF01370 NAD dependent epimerase/dehydratase family CJD35_RS10855 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS10855 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJD35_RS10855 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJD35_RS10860 PF00108 Thiolase, N-terminal domain CJD35_RS10860 PF02803 Thiolase, C-terminal domain CJD35_RS10865 PF05977 Transmembrane secretion effector CJD35_RS10875 PF01227 GTP cyclohydrolase I CJD35_RS10885 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS10900 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJD35_RS10900 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJD35_RS10905 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS10910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS10910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS10910 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS10920 PF00171 Aldehyde dehydrogenase family CJD35_RS10935 PF00005 ABC transporter CJD35_RS10940 PF01061 ABC-2 type transporter CJD35_RS10950 PF01554 MatE CJD35_RS10955 PF05661 Protein of unknown function (DUF808) CJD35_RS10970 PF01022 Bacterial regulatory protein, arsR family CJD35_RS10975 PF18755 Restriction Enzyme Adenine Methylase Associated CJD35_RS10975 PF01555 DNA methylase CJD35_RS10980 PF00809 Pterin binding enzyme CJD35_RS10990 PF00072 Response regulator receiver domain CJD35_RS10990 PF02954 Bacterial regulatory protein, Fis family CJD35_RS10990 PF00158 Sigma-54 interaction domain CJD35_RS11000 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJD35_RS11000 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CJD35_RS11010 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CJD35_RS11015 PF02233 NAD(P) transhydrogenase beta subunit CJD35_RS11040 PF08448 PAS fold CJD35_RS11040 PF00072 Response regulator receiver domain CJD35_RS11040 PF13426 PAS domain CJD35_RS11040 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS11040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS11050 PF00263 Bacterial type II and III secretion system protein CJD35_RS11050 PF13629 Pilus formation protein N terminal region CJD35_RS11050 PF04972 BON domain CJD35_RS11075 PF07411 Domain of unknown function (DUF1508) CJD35_RS11080 PF03948 Ribosomal protein L9, C-terminal domain CJD35_RS11080 PF01281 Ribosomal protein L9, N-terminal domain CJD35_RS11085 PF01084 Ribosomal protein S18 CJD35_RS11090 PF01250 Ribosomal protein S6 CJD35_RS11110 PF12704 MacB-like periplasmic core domain CJD35_RS11110 PF02687 FtsX-like permease family CJD35_RS11110 PF00005 ABC transporter CJD35_RS11115 PF00005 ABC transporter CJD35_RS11115 PF02687 FtsX-like permease family CJD35_RS11115 PF12704 MacB-like periplasmic core domain CJD35_RS11125 PF02321 Outer membrane efflux protein CJD35_RS11130 PF00698 Acyl transferase domain CJD35_RS11135 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS11150 PF00550 Phosphopantetheine attachment site CJD35_RS11155 PF02801 Beta-ketoacyl synthase, C-terminal domain CJD35_RS11155 PF00109 Beta-ketoacyl synthase, N-terminal domain CJD35_RS11160 PF02618 YceG-like family CJD35_RS11170 PF08534 Redoxin CJD35_RS11180 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS11180 PF14759 Reductase C-terminal CJD35_RS11195 PF00589 Phage integrase family CJD35_RS11195 PF13356 Arm DNA-binding domain CJD35_RS11200 PF00665 Integrase core domain CJD35_RS11205 PF01695 IstB-like ATP binding protein CJD35_RS11215 PF00483 Nucleotidyl transferase CJD35_RS11220 PF16363 GDP-mannose 4,6 dehydratase CJD35_RS11225 PF08421 Putative zinc binding domain CJD35_RS11225 PF08484 C-methyltransferase C-terminal domain CJD35_RS11230 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CJD35_RS11235 PF00550 Phosphopantetheine attachment site CJD35_RS11235 PF00501 AMP-binding enzyme CJD35_RS11235 PF13193 AMP-binding enzyme C-terminal domain CJD35_RS11235 PF00668 Condensation domain CJD35_RS11235 PF07993 Male sterility protein CJD35_RS11240 PF04989 Cephalosporin hydroxylase CJD35_RS11245 PF00535 Glycosyl transferase family 2 CJD35_RS11255 PF00535 Glycosyl transferase family 2 CJD35_RS11265 PF00593 TonB dependent receptor CJD35_RS11265 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS11270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS11270 PF03466 LysR substrate binding domain CJD35_RS11275 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS11275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS11275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS11285 PF01039 Carboxyl transferase domain CJD35_RS11290 PF04480 Protein of unknown function (DUF559) CJD35_RS11295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJD35_RS11295 PF02785 Biotin carboxylase C-terminal domain CJD35_RS11295 PF18140 Propionyl-coenzyme A carboxylase BT domain CJD35_RS11295 PF00364 Biotin-requiring enzyme CJD35_RS11295 PF00289 Biotin carboxylase, N-terminal domain CJD35_RS11300 PF01575 MaoC like domain CJD35_RS11310 PF00291 Pyridoxal-phosphate dependent enzyme CJD35_RS11325 PF01925 Sulfite exporter TauE/SafE CJD35_RS11470 PF00574 Clp protease CJD35_RS11505 PF08275 DNA primase catalytic core, N-terminal domain CJD35_RS11505 PF01807 CHC2 zinc finger CJD35_RS11505 PF08278 DNA primase DnaG DnaB-binding CJD35_RS11505 PF10410 DnaB-helicase binding domain of primase CJD35_RS11520 PF00712 DNA polymerase III beta subunit, N-terminal domain CJD35_RS11520 PF02767 DNA polymerase III beta subunit, central domain CJD35_RS11520 PF02768 DNA polymerase III beta subunit, C-terminal domain CJD35_RS11535 PF02195 ParB-like nuclease domain CJD35_RS11590 PF13632 Glycosyl transferase family group 2 CJD35_RS11590 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CJD35_RS11595 PF06965 Na+/H+ antiporter 1 CJD35_RS11610 PF08442 ATP-grasp domain CJD35_RS11610 PF00549 CoA-ligase CJD35_RS11615 PF01012 Electron transfer flavoprotein domain CJD35_RS11620 PF01012 Electron transfer flavoprotein domain CJD35_RS11620 PF00766 Electron transfer flavoprotein FAD-binding domain CJD35_RS11640 PF00313 'Cold-shock' DNA-binding domain CJD35_RS11655 PF14403 Circularly permuted ATP-grasp type 2 CJD35_RS11665 PF08379 Bacterial transglutaminase-like N-terminal region CJD35_RS11665 PF01841 Transglutaminase-like superfamily CJD35_RS11675 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS11680 PF00550 Phosphopantetheine attachment site CJD35_RS11690 PF13193 AMP-binding enzyme C-terminal domain CJD35_RS11690 PF00501 AMP-binding enzyme CJD35_RS11695 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CJD35_RS11695 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJD35_RS11720 PF01471 Putative peptidoglycan binding domain CJD35_RS11720 PF13401 AAA domain CJD35_RS11725 PF01522 Polysaccharide deacetylase CJD35_RS11740 PF00534 Glycosyl transferases group 1 CJD35_RS11740 PF13439 Glycosyltransferase Family 4 CJD35_RS11750 PF13537 Glutamine amidotransferase domain CJD35_RS11750 PF00733 Asparagine synthase CJD35_RS11755 PF02397 Bacterial sugar transferase CJD35_RS11790 PF07969 Amidohydrolase family CJD35_RS11795 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CJD35_RS11795 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CJD35_RS11800 PF00291 Pyridoxal-phosphate dependent enzyme CJD35_RS11800 PF13291 ACT domain CJD35_RS11805 PF04376 Arginine-tRNA-protein transferase, N terminus CJD35_RS11805 PF04377 Arginine-tRNA-protein transferase, C terminus CJD35_RS11820 PF13185 GAF domain CJD35_RS11830 PF00472 RF-1 domain CJD35_RS11835 PF00849 RNA pseudouridylate synthase CJD35_RS11845 PF02540 NAD synthase CJD35_RS11845 PF00795 Carbon-nitrogen hydrolase CJD35_RS11850 PF04371 Porphyromonas-type peptidyl-arginine deiminase CJD35_RS11865 PF00326 Prolyl oligopeptidase family CJD35_RS11870 PF03358 NADPH-dependent FMN reductase CJD35_RS11875 PF02678 Pirin CJD35_RS11875 PF17954 Quercetinase C-terminal cupin domain CJD35_RS11880 PF03466 LysR substrate binding domain CJD35_RS11880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS11885 PF00072 Response regulator receiver domain CJD35_RS11885 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS11890 PF07859 alpha/beta hydrolase fold CJD35_RS11905 PF08281 Sigma-70, region 4 CJD35_RS11905 PF04542 Sigma-70 region 2 CJD35_RS11920 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS11920 PF00593 TonB dependent receptor CJD35_RS11925 PF00149 Calcineurin-like phosphoesterase CJD35_RS11930 PF00692 dUTPase CJD35_RS11935 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CJD35_RS11940 PF01183 Glycosyl hydrolases family 25 CJD35_RS11945 PF06793 Uncharacterised protein family (UPF0262) CJD35_RS11950 PF03796 DnaB-like helicase C terminal domain CJD35_RS11950 PF00772 DnaB-like helicase N terminal domain CJD35_RS11960 PF01507 Phosphoadenosine phosphosulfate reductase family CJD35_RS11970 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJD35_RS11970 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJD35_RS11980 PF10414 Sirohaem synthase dimerisation region CJD35_RS11980 PF14824 Sirohaem biosynthesis protein central CJD35_RS11980 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJD35_RS11985 PF00171 Aldehyde dehydrogenase family CJD35_RS11990 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CJD35_RS12020 PF00171 Aldehyde dehydrogenase family CJD35_RS12030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS12040 PF13614 AAA domain CJD35_RS12075 PF07517 SecA DEAD-like domain CJD35_RS12075 PF01043 SecA preprotein cross-linking domain CJD35_RS12080 PF02321 Outer membrane efflux protein CJD35_RS12100 PF02913 FAD linked oxidases, C-terminal domain CJD35_RS12100 PF01565 FAD binding domain CJD35_RS12110 PF00270 DEAD/DEAH box helicase CJD35_RS12110 PF00271 Helicase conserved C-terminal domain CJD35_RS12120 PF04002 RadC-like JAB domain CJD35_RS12140 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter CJD35_RS12145 PF00119 ATP synthase A chain CJD35_RS12150 PF00137 ATP synthase subunit C CJD35_RS12160 PF00430 ATP synthase B/B' CF(0) CJD35_RS12165 PF01541 GIY-YIG catalytic domain CJD35_RS12165 PF08459 UvrC Helix-hairpin-helix N-terminal CJD35_RS12165 PF02151 UvrB/uvrC motif CJD35_RS12170 PF11967 Recombination protein O N terminal CJD35_RS12170 PF02565 Recombination protein O C terminal CJD35_RS12175 PF00180 Isocitrate/isopropylmalate dehydrogenase CJD35_RS12185 PF00291 Pyridoxal-phosphate dependent enzyme CJD35_RS12190 PF01053 Cys/Met metabolism PLP-dependent enzyme CJD35_RS12195 PF04379 ApaG domain CJD35_RS12200 PF03466 LysR substrate binding domain CJD35_RS12200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS12210 PF02254 TrkA-N domain CJD35_RS12210 PF00999 Sodium/hydrogen exchanger family CJD35_RS12220 PF00216 Bacterial DNA-binding protein CJD35_RS12225 PF00575 S1 RNA binding domain CJD35_RS12230 PF02224 Cytidylate kinase CJD35_RS12240 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CJD35_RS12270 PF13361 UvrD-like helicase C-terminal domain CJD35_RS12270 PF00580 UvrD/REP helicase N-terminal domain CJD35_RS12285 PF02082 Transcriptional regulator CJD35_RS12290 PF00042 Globin CJD35_RS12290 PF00175 Oxidoreductase NAD-binding domain CJD35_RS12290 PF00970 Oxidoreductase FAD-binding domain CJD35_RS12300 PF00849 RNA pseudouridylate synthase CJD35_RS12300 PF01479 S4 domain CJD35_RS12310 PF07690 Major Facilitator Superfamily CJD35_RS12320 PF08245 Mur ligase middle domain CJD35_RS12320 PF02875 Mur ligase family, glutamate ligase domain CJD35_RS12325 PF17848 Acetyl-coA carboxylase zinc finger domain CJD35_RS12325 PF01039 Carboxyl transferase domain CJD35_RS12330 PF00290 Tryptophan synthase alpha chain CJD35_RS12335 PF00291 Pyridoxal-phosphate dependent enzyme CJD35_RS12340 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CJD35_RS12360 PF00521 DNA gyrase/topoisomerase IV, subunit A CJD35_RS12360 PF03989 DNA gyrase C-terminal domain, beta-propeller CJD35_RS12375 PF01037 Lrp/AsnC ligand binding domain CJD35_RS12380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS12380 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS12395 PF06719 AraC-type transcriptional regulator N-terminus CJD35_RS12395 PF12833 Helix-turn-helix domain CJD35_RS12410 PF13360 PQQ-like domain CJD35_RS12410 PF01011 PQQ enzyme repeat CJD35_RS12415 PF00072 Response regulator receiver domain CJD35_RS12415 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS12420 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS12420 PF16736 Single Cache-like CJD35_RS12420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS12420 PF00989 PAS fold CJD35_RS12430 PF04055 Radical SAM superfamily CJD35_RS12435 PF03922 OmpW family CJD35_RS12440 PF00665 Integrase core domain CJD35_RS12445 PF01695 IstB-like ATP binding protein CJD35_RS12475 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS12480 PF03466 LysR substrate binding domain CJD35_RS12480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS12490 PF03992 Antibiotic biosynthesis monooxygenase CJD35_RS12495 PF00106 short chain dehydrogenase CJD35_RS12505 PF03928 Haem-degrading CJD35_RS12510 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS12510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJD35_RS12515 PF01965 DJ-1/PfpI family CJD35_RS12520 PF17755 UvrA DNA-binding domain CJD35_RS12525 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS12525 PF00107 Zinc-binding dehydrogenase CJD35_RS12530 PF00107 Zinc-binding dehydrogenase CJD35_RS12530 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS12535 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS12540 PF00248 Aldo/keto reductase family CJD35_RS12550 PF01098 Cell cycle protein CJD35_RS12555 PF03717 Penicillin-binding Protein dimerisation domain CJD35_RS12555 PF00905 Penicillin binding protein transpeptidase domain CJD35_RS12575 PF01119 DNA mismatch repair protein, C-terminal domain CJD35_RS12575 PF08676 MutL C terminal dimerisation domain CJD35_RS12585 PF01575 MaoC like domain CJD35_RS12585 PF00171 Aldehyde dehydrogenase family CJD35_RS12600 PF06071 Protein of unknown function (DUF933) CJD35_RS12600 PF01926 50S ribosome-binding GTPase CJD35_RS12605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJD35_RS12605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJD35_RS12605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJD35_RS12605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJD35_RS12610 PF01195 Peptidyl-tRNA hydrolase CJD35_RS12615 PF14693 Ribosomal protein TL5, C-terminal domain CJD35_RS12615 PF01386 Ribosomal L25p family CJD35_RS12630 PF02091 Glycyl-tRNA synthetase alpha subunit CJD35_RS12635 PF05746 DALR anticodon binding domain CJD35_RS12635 PF02092 Glycyl-tRNA synthetase beta subunit CJD35_RS12640 PF00391 PEP-utilising enzyme, mobile domain CJD35_RS12640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CJD35_RS12640 PF02896 PEP-utilising enzyme, TIM barrel domain CJD35_RS12645 PF00318 Ribosomal protein S2 CJD35_RS12660 PF07685 CobB/CobQ-like glutamine amidotransferase domain CJD35_RS12685 PF04996 Succinylarginine dihydrolase CJD35_RS12690 PF04958 Arginine N-succinyltransferase beta subunit CJD35_RS12695 PF07687 Peptidase dimerisation domain CJD35_RS12695 PF01546 Peptidase family M20/M25/M40 CJD35_RS12705 PF00293 NUDIX domain CJD35_RS12710 PF00875 DNA photolyase CJD35_RS12710 PF03441 FAD binding domain of DNA photolyase CJD35_RS12720 PF00106 short chain dehydrogenase CJD35_RS12725 PF13537 Glutamine amidotransferase domain CJD35_RS12725 PF00156 Phosphoribosyl transferase domain CJD35_RS12730 PF02417 Chromate transporter CJD35_RS12735 PF01578 Cytochrome C assembly protein CJD35_RS12740 PF03100 CcmE CJD35_RS12750 PF08534 Redoxin CJD35_RS12755 PF03918 Cytochrome C biogenesis protein CJD35_RS12765 PF02705 K+ potassium transporter CJD35_RS12770 PF00011 Hsp20/alpha crystallin family CJD35_RS12775 PF02687 FtsX-like permease family CJD35_RS12775 PF12704 MacB-like periplasmic core domain CJD35_RS12780 PF00005 ABC transporter CJD35_RS12785 PF14579 Helix-hairpin-helix motif CJD35_RS12785 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJD35_RS12785 PF02811 PHP domain CJD35_RS12785 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJD35_RS12795 PF00994 Probable molybdopterin binding domain CJD35_RS12800 PF01464 Transglycosylase SLT domain CJD35_RS12800 PF14718 Soluble lytic murein transglycosylase L domain CJD35_RS12820 PF08544 GHMP kinases C terminal CJD35_RS12820 PF00288 GHMP kinases N terminal domain CJD35_RS12835 PF01256 Carbohydrate kinase CJD35_RS12835 PF03853 YjeF-related protein N-terminus CJD35_RS12840 PF05958 tRNA (Uracil-5-)-methyltransferase CJD35_RS12850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CJD35_RS12855 PF16653 Saccharopine dehydrogenase C-terminal domain CJD35_RS12855 PF03435 Saccharopine dehydrogenase NADP binding domain CJD35_RS12860 PF02469 Fasciclin domain CJD35_RS12865 PF04679 ATP dependent DNA ligase C terminal region CJD35_RS12865 PF04675 DNA ligase N terminus CJD35_RS12865 PF01068 ATP dependent DNA ligase domain CJD35_RS12885 PF00155 Aminotransferase class I and II CJD35_RS12890 PF01177 Asp/Glu/Hydantoin racemase CJD35_RS12900 PF02660 Glycerol-3-phosphate acyltransferase CJD35_RS12910 PF01396 Topoisomerase DNA binding C4 zinc finger CJD35_RS12910 PF13368 Topoisomerase C-terminal repeat CJD35_RS12910 PF01131 DNA topoisomerase CJD35_RS12910 PF01751 Toprim domain CJD35_RS12915 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS12915 PF07694 5TMR of 5TMR-LYT CJD35_RS12920 PF01926 50S ribosome-binding GTPase CJD35_RS12920 PF07650 KH domain CJD35_RS12925 PF00035 Double-stranded RNA binding motif CJD35_RS12925 PF14622 Ribonuclease-III-like CJD35_RS12930 PF10502 Signal peptidase, peptidase S26 CJD35_RS12935 PF00342 Phosphoglucose isomerase CJD35_RS12940 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS12940 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJD35_RS12950 PF09856 Predicted transcriptional regulator (DUF2083) CJD35_RS12950 PF06114 IrrE N-terminal-like domain CJD35_RS12950 PF01381 Helix-turn-helix CJD35_RS12955 PF01039 Carboxyl transferase domain CJD35_RS12965 PF02310 B12 binding domain CJD35_RS12965 PF01642 Methylmalonyl-CoA mutase CJD35_RS12970 PF06968 Biotin and Thiamin Synthesis associated domain CJD35_RS12970 PF04055 Radical SAM superfamily CJD35_RS12975 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJD35_RS12975 PF00364 Biotin-requiring enzyme CJD35_RS12975 PF18140 Propionyl-coenzyme A carboxylase BT domain CJD35_RS12975 PF00289 Biotin carboxylase, N-terminal domain CJD35_RS12975 PF02785 Biotin carboxylase C-terminal domain CJD35_RS12980 PF10677 Protein of unknown function (DUF2490) CJD35_RS12985 PF08946 Osmosensory transporter coiled coil CJD35_RS12985 PF00083 Sugar (and other) transporter CJD35_RS12995 PF02803 Thiolase, C-terminal domain CJD35_RS12995 PF00108 Thiolase, N-terminal domain CJD35_RS13005 PF07879 PHB/PHA accumulation regulator DNA-binding domain CJD35_RS13005 PF05233 PHB accumulation regulatory domain CJD35_RS13015 PF03129 Anticodon binding domain CJD35_RS13015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CJD35_RS13020 PF07724 AAA domain (Cdc48 subfamily) CJD35_RS13020 PF10431 C-terminal, D2-small domain, of ClpB protein CJD35_RS13020 PF00004 ATPase family associated with various cellular activities (AAA) CJD35_RS13025 PF00227 Proteasome subunit CJD35_RS13045 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region CJD35_RS13045 PF00326 Prolyl oligopeptidase family CJD35_RS13050 PF02774 Semialdehyde dehydrogenase, dimerisation domain CJD35_RS13050 PF01118 Semialdehyde dehydrogenase, NAD binding domain CJD35_RS13060 PF00561 alpha/beta hydrolase fold CJD35_RS13070 PF00563 EAL domain CJD35_RS13070 PF03707 Bacterial signalling protein N terminal repeat CJD35_RS13070 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS13075 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus CJD35_RS13075 PF01048 Phosphorylase superfamily CJD35_RS13080 PF00462 Glutaredoxin CJD35_RS13080 PF08534 Redoxin CJD35_RS13085 PF02622 Uncharacterized ACR, COG1678 CJD35_RS13090 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CJD35_RS13090 PF05221 S-adenosyl-L-homocysteine hydrolase CJD35_RS13095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS13095 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS13100 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CJD35_RS13105 PF01636 Phosphotransferase enzyme family CJD35_RS13110 PF12804 MobA-like NTP transferase domain CJD35_RS13115 PF12705 PD-(D/E)XK nuclease superfamily CJD35_RS13120 PF12705 PD-(D/E)XK nuclease superfamily CJD35_RS13120 PF00580 UvrD/REP helicase N-terminal domain CJD35_RS13120 PF13361 UvrD-like helicase C-terminal domain CJD35_RS13125 PF00085 Thioredoxin CJD35_RS13130 PF00459 Inositol monophosphatase family CJD35_RS13135 PF01960 ArgJ family CJD35_RS13140 PF07517 SecA DEAD-like domain CJD35_RS13140 PF02810 SEC-C motif CJD35_RS13140 PF01043 SecA preprotein cross-linking domain CJD35_RS13140 PF07516 SecA Wing and Scaffold domain CJD35_RS13155 PF13406 Transglycosylase SLT domain CJD35_RS13160 PF03330 Lytic transglycolase CJD35_RS13160 PF05036 Sporulation related domain CJD35_RS13165 PF00768 D-alanyl-D-alanine carboxypeptidase CJD35_RS13165 PF07943 Penicillin-binding protein 5, C-terminal domain CJD35_RS13170 PF02223 Thymidylate kinase CJD35_RS13175 PF09115 DNA polymerase III, delta subunit, C terminal CJD35_RS13180 PF08264 Anticodon-binding domain of tRNA CJD35_RS13180 PF09334 tRNA synthetases class I (M) CJD35_RS13185 PF01026 TatD related DNase CJD35_RS13200 PF00083 Sugar (and other) transporter CJD35_RS13205 PF03819 MazG nucleotide pyrophosphohydrolase domain CJD35_RS13220 PF01926 50S ribosome-binding GTPase CJD35_RS13220 PF13167 GTP-binding GTPase N-terminal CJD35_RS13220 PF16360 GTP-binding GTPase Middle Region CJD35_RS13225 PF02272 DHHA1 domain CJD35_RS13225 PF01411 tRNA synthetases class II (A) CJD35_RS13225 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CJD35_RS13235 PF02581 Thiamine monophosphate synthase CJD35_RS13240 PF00274 Fructose-bisphosphate aldolase class-I CJD35_RS13245 PF00162 Phosphoglycerate kinase CJD35_RS13250 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CJD35_RS13250 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CJD35_RS13255 PF02779 Transketolase, pyrimidine binding domain CJD35_RS13255 PF02780 Transketolase, C-terminal domain CJD35_RS13255 PF00456 Transketolase, thiamine diphosphate binding domain CJD35_RS13270 PF01812 5-formyltetrahydrofolate cyclo-ligase family CJD35_RS13290 PF01594 AI-2E family transporter CJD35_RS13300 PF02817 e3 binding domain CJD35_RS13300 PF00364 Biotin-requiring enzyme CJD35_RS13300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJD35_RS13305 PF02780 Transketolase, C-terminal domain CJD35_RS13305 PF02779 Transketolase, pyrimidine binding domain CJD35_RS13310 PF00676 Dehydrogenase E1 component CJD35_RS13310 PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal CJD35_RS13315 PF00303 Thymidylate synthase CJD35_RS13345 PF17863 AAA lid domain CJD35_RS13345 PF07726 ATPase family associated with various cellular activities (AAA) CJD35_RS13380 PF00994 Probable molybdopterin binding domain CJD35_RS13380 PF18146 Damage-inducible protein CinA KH domain CJD35_RS13380 PF02464 Competence-damaged protein CJD35_RS13385 PF00557 Metallopeptidase family M24 CJD35_RS13390 PF00543 Nitrogen regulatory protein P-II CJD35_RS13395 PF03951 Glutamine synthetase, beta-Grasp domain CJD35_RS13395 PF00120 Glutamine synthetase, catalytic domain CJD35_RS13405 PF01569 PAP2 superfamily CJD35_RS13410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS13410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJD35_RS13415 PF03061 Thioesterase superfamily CJD35_RS13420 PF00364 Biotin-requiring enzyme CJD35_RS13420 PF02817 e3 binding domain CJD35_RS13420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJD35_RS13440 PF03473 MOSC domain CJD35_RS13440 PF03475 3-alpha domain CJD35_RS13450 PF00534 Glycosyl transferases group 1 CJD35_RS13450 PF08323 Starch synthase catalytic domain CJD35_RS13455 PF00004 ATPase family associated with various cellular activities (AAA) CJD35_RS13455 PF16193 AAA C-terminal domain CJD35_RS13455 PF12002 MgsA AAA+ ATPase C terminal CJD35_RS13640 PF17288 Terminase RNAseH like domain CJD35_RS13640 PF04466 Phage terminase large subunit CJD35_RS13815 PF00293 NUDIX domain CJD35_RS13820 PF13735 tRNA nucleotidyltransferase domain 2 putative CJD35_RS13820 PF12627 Probable RNA and SrmB- binding site of polymerase A CJD35_RS13820 PF01743 Poly A polymerase head domain CJD35_RS13825 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS13825 PF00563 EAL domain CJD35_RS13825 PF08447 PAS fold CJD35_RS13825 PF08448 PAS fold CJD35_RS13830 PF03989 DNA gyrase C-terminal domain, beta-propeller CJD35_RS13830 PF00521 DNA gyrase/topoisomerase IV, subunit A CJD35_RS13845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS13845 PF03466 LysR substrate binding domain CJD35_RS13855 PF02358 Trehalose-phosphatase CJD35_RS13860 PF00723 Glycosyl hydrolases family 15 CJD35_RS13865 PF00982 Glycosyltransferase family 20 CJD35_RS13870 PF01259 SAICAR synthetase CJD35_RS13885 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CJD35_RS13895 PF13614 AAA domain CJD35_RS13895 PF13807 G-rich domain on putative tyrosine kinase CJD35_RS13895 PF02706 Chain length determinant protein CJD35_RS13905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CJD35_RS13905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CJD35_RS13905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CJD35_RS13915 PF02350 UDP-N-acetylglucosamine 2-epimerase CJD35_RS13930 PF13505 Outer membrane protein beta-barrel domain CJD35_RS13935 PF01751 Toprim domain CJD35_RS13935 PF00986 DNA gyrase B subunit, carboxyl terminus CJD35_RS13935 PF00204 DNA gyrase B CJD35_RS13935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS13945 PF03597 Cytochrome oxidase maturation protein cbb3-type CJD35_RS13950 PF00403 Heavy-metal-associated domain CJD35_RS13955 PF05751 FixH CJD35_RS13965 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJD35_RS13965 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CJD35_RS13980 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJD35_RS13985 PF13545 Crp-like helix-turn-helix domain CJD35_RS13985 PF00027 Cyclic nucleotide-binding domain CJD35_RS13990 PF00196 Bacterial regulatory proteins, luxR family CJD35_RS13990 PF00072 Response regulator receiver domain CJD35_RS13995 PF00989 PAS fold CJD35_RS13995 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS14005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CJD35_RS14005 PF00672 HAMP domain CJD35_RS14020 PF03702 Anhydro-N-acetylmuramic acid kinase CJD35_RS14025 PF00579 tRNA synthetases class I (W and Y) CJD35_RS14025 PF01479 S4 domain CJD35_RS14035 PF00924 Mechanosensitive ion channel CJD35_RS14040 PF00271 Helicase conserved C-terminal domain CJD35_RS14040 PF00270 DEAD/DEAH box helicase CJD35_RS14040 PF17191 RecG wedge domain CJD35_RS14045 PF03937 Flavinator of succinate dehydrogenase CJD35_RS14050 PF00271 Helicase conserved C-terminal domain CJD35_RS14050 PF03461 TRCF domain CJD35_RS14050 PF00270 DEAD/DEAH box helicase CJD35_RS14050 PF17757 UvrB interaction domain CJD35_RS14050 PF02559 CarD-like/TRCF domain CJD35_RS14070 PF03707 Bacterial signalling protein N terminal repeat CJD35_RS14070 PF00563 EAL domain CJD35_RS14070 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS14075 PF04055 Radical SAM superfamily CJD35_RS14075 PF06463 Molybdenum Cofactor Synthesis C CJD35_RS14080 PF01513 ATP-NAD kinase CJD35_RS14090 PF04960 Glutaminase CJD35_RS14095 PF17209 Hfq protein CJD35_RS14100 PF00158 Sigma-54 interaction domain CJD35_RS14100 PF00072 Response regulator receiver domain CJD35_RS14100 PF02954 Bacterial regulatory protein, Fis family CJD35_RS14105 PF00672 HAMP domain CJD35_RS14105 PF00989 PAS fold CJD35_RS14105 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS14110 PF00072 Response regulator receiver domain CJD35_RS14110 PF02954 Bacterial regulatory protein, Fis family CJD35_RS14110 PF00158 Sigma-54 interaction domain CJD35_RS14115 PF00989 PAS fold CJD35_RS14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS14115 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS14120 PF01207 Dihydrouridine synthase (Dus) CJD35_RS14125 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CJD35_RS14125 PF02542 YgbB family CJD35_RS14130 PF00994 Probable molybdopterin binding domain CJD35_RS14130 PF02464 Competence-damaged protein CJD35_RS14130 PF18146 Damage-inducible protein CinA KH domain CJD35_RS14135 PF03364 Polyketide cyclase / dehydrase and lipid transport CJD35_RS14140 PF04055 Radical SAM superfamily CJD35_RS14140 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CJD35_RS14145 PF00484 Carbonic anhydrase CJD35_RS14155 PF00005 ABC transporter CJD35_RS14155 PF12848 ABC transporter CJD35_RS14175 PF02811 PHP domain CJD35_RS14175 PF01336 OB-fold nucleic acid binding domain CJD35_RS14175 PF14579 Helix-hairpin-helix motif CJD35_RS14175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CJD35_RS14175 PF07733 Bacterial DNA polymerase III alpha NTPase domain CJD35_RS14190 PF06750 Bacterial Peptidase A24 N-terminal domain CJD35_RS14190 PF01478 Type IV leader peptidase family CJD35_RS14210 PF03934 Type II secretion system (T2SS), protein K CJD35_RS14215 PF07963 Prokaryotic N-terminal methylation motif CJD35_RS14215 PF11612 Type II secretion system (T2SS), protein J CJD35_RS14220 PF07963 Prokaryotic N-terminal methylation motif CJD35_RS14220 PF02501 Type II secretion system (T2SS), protein I CJD35_RS14225 PF07963 Prokaryotic N-terminal methylation motif CJD35_RS14225 PF12019 Type II transport protein GspH CJD35_RS14230 PF07963 Prokaryotic N-terminal methylation motif CJD35_RS14230 PF08334 Type II secretion system (T2SS), protein G CJD35_RS14235 PF00482 Type II secretion system (T2SS), protein F CJD35_RS14240 PF00437 Type II/IV secretion system protein CJD35_RS14245 PF03958 Bacterial type II/III secretion system short domain CJD35_RS14245 PF00263 Bacterial type II and III secretion system protein CJD35_RS14285 PF00117 Glutamine amidotransferase class-I CJD35_RS14290 PF00916 Sulfate permease family CJD35_RS14290 PF01740 STAS domain CJD35_RS14295 PF00591 Glycosyl transferase family, a/b domain CJD35_RS14295 PF02885 Glycosyl transferase family, helical bundle domain CJD35_RS14300 PF00218 Indole-3-glycerol phosphate synthase CJD35_RS14305 PF01967 MoaC family CJD35_RS14310 PF03454 MoeA C-terminal region (domain IV) CJD35_RS14310 PF03453 MoeA N-terminal region (domain I and II) CJD35_RS14310 PF00994 Probable molybdopterin binding domain CJD35_RS14315 PF00717 Peptidase S24-like CJD35_RS14315 PF01726 LexA DNA binding domain CJD35_RS14320 PF00753 Metallo-beta-lactamase superfamily CJD35_RS14320 PF03772 Competence protein CJD35_RS14325 PF00749 tRNA synthetases class I (E and Q), catalytic domain CJD35_RS14330 PF00285 Citrate synthase, C-terminal domain CJD35_RS14335 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS14335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS14365 PF12706 Beta-lactamase superfamily domain CJD35_RS14365 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CJD35_RS14365 PF17770 Ribonuclease J C-terminal domain CJD35_RS14370 PF03309 Type III pantothenate kinase CJD35_RS14375 PF02237 Biotin protein ligase C terminal domain CJD35_RS14375 PF03099 Biotin/lipoate A/B protein ligase family CJD35_RS14380 PF00361 Proton-conducting membrane transporter CJD35_RS14385 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CJD35_RS14385 PF00361 Proton-conducting membrane transporter CJD35_RS14390 PF00361 Proton-conducting membrane transporter CJD35_RS14390 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJD35_RS14395 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJD35_RS14400 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CJD35_RS14405 PF12838 4Fe-4S dicluster domain CJD35_RS14410 PF00146 NADH dehydrogenase CJD35_RS14415 PF00384 Molybdopterin oxidoreductase CJD35_RS14415 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CJD35_RS14415 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CJD35_RS14420 PF10531 SLBB domain CJD35_RS14420 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CJD35_RS14420 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CJD35_RS14430 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CJD35_RS14435 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CJD35_RS14440 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CJD35_RS14445 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CJD35_RS14450 PF00459 Inositol monophosphatase family CJD35_RS14455 PF09285 Elongation factor P, C-terminal CJD35_RS14455 PF08207 Elongation factor P (EF-P) KOW-like domain CJD35_RS14455 PF01132 Elongation factor P (EF-P) OB domain CJD35_RS14460 PF04225 Opacity-associated protein A LysM-like domain CJD35_RS14460 PF01551 Peptidase family M23 CJD35_RS14470 PF01274 Malate synthase CJD35_RS14475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS14475 PF03466 LysR substrate binding domain CJD35_RS14480 PF01515 Phosphate acetyl/butaryl transferase CJD35_RS14480 PF03949 Malic enzyme, NAD binding domain CJD35_RS14480 PF00390 Malic enzyme, N-terminal domain CJD35_RS14490 PF07690 Major Facilitator Superfamily CJD35_RS14510 PF01502 Phosphoribosyl-AMP cyclohydrolase CJD35_RS14520 PF05036 Sporulation related domain CJD35_RS14520 PF03330 Lytic transglycolase CJD35_RS14525 PF00216 Bacterial DNA-binding protein CJD35_RS14530 PF05362 Lon protease (S16) C-terminal proteolytic domain CJD35_RS14530 PF02190 ATP-dependent protease La (LON) substrate-binding domain CJD35_RS14530 PF00004 ATPase family associated with various cellular activities (AAA) CJD35_RS14535 PF02575 YbaB/EbfC DNA-binding family CJD35_RS14540 PF12170 DNA polymerase III tau subunit V interacting with alpha CJD35_RS14540 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CJD35_RS14540 PF12169 DNA polymerase III subunits gamma and tau domain III CJD35_RS14560 PF00266 Aminotransferase class-V CJD35_RS14565 PF00266 Aminotransferase class-V CJD35_RS14570 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CJD35_RS14580 PF02502 Ribose/Galactose Isomerase CJD35_RS14585 PF00464 Serine hydroxymethyltransferase CJD35_RS14590 PF03477 ATP cone domain CJD35_RS14595 PF00588 SpoU rRNA Methylase family CJD35_RS14605 PF01479 S4 domain CJD35_RS14605 PF00163 Ribosomal protein S4/S9 N-terminal domain CJD35_RS14615 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CJD35_RS14630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CJD35_RS14630 PF18390 Glycogen debranching enzyme C-terminal domain CJD35_RS14630 PF00128 Alpha amylase, catalytic domain CJD35_RS14640 PF00483 Nucleotidyl transferase CJD35_RS14650 PF00343 Carbohydrate phosphorylase CJD35_RS14655 PF00144 Beta-lactamase CJD35_RS14680 PF02934 GatB/GatE catalytic domain CJD35_RS14680 PF02637 GatB domain CJD35_RS14690 PF01425 Amidase CJD35_RS14695 PF02686 Glu-tRNAGln amidotransferase C subunit CJD35_RS14705 PF03652 Holliday junction resolvase CJD35_RS14730 PF00205 Thiamine pyrophosphate enzyme, central domain CJD35_RS14730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJD35_RS14730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJD35_RS14740 PF10369 Small subunit of acetolactate synthase CJD35_RS14745 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CJD35_RS14745 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CJD35_RS14750 PF04264 YceI-like domain CJD35_RS14755 PF00682 HMGL-like CJD35_RS14755 PF08502 LeuA allosteric (dimerisation) domain CJD35_RS14760 PF07687 Peptidase dimerisation domain CJD35_RS14760 PF01546 Peptidase family M20/M25/M40 CJD35_RS14765 PF00375 Sodium:dicarboxylate symporter family CJD35_RS14770 PF01134 Glucose inhibited division protein A CJD35_RS14800 PF00364 Biotin-requiring enzyme CJD35_RS14800 PF02779 Transketolase, pyrimidine binding domain CJD35_RS14800 PF02780 Transketolase, C-terminal domain CJD35_RS14805 PF00676 Dehydrogenase E1 component CJD35_RS14815 PF03952 Enolase, N-terminal domain CJD35_RS14815 PF00113 Enolase, C-terminal TIM barrel domain CJD35_RS14850 PF03449 Transcription elongation factor, N-terminal CJD35_RS14850 PF01272 Transcription elongation factor, GreA/GreB, C-term CJD35_RS14855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CJD35_RS14855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CJD35_RS14855 PF02142 MGS-like domain CJD35_RS14865 PF00117 Glutamine amidotransferase class-I CJD35_RS14865 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CJD35_RS14870 PF09424 Yqey-like protein CJD35_RS14875 PF04480 Protein of unknown function (DUF559) CJD35_RS14880 PF10410 DnaB-helicase binding domain of primase CJD35_RS14880 PF01807 CHC2 zinc finger CJD35_RS14880 PF08275 DNA primase catalytic core, N-terminal domain CJD35_RS14880 PF08278 DNA primase DnaG DnaB-binding CJD35_RS14885 PF04546 Sigma-70, non-essential region CJD35_RS14885 PF03979 Sigma-70 factor, region 1.1 CJD35_RS14885 PF04542 Sigma-70 region 2 CJD35_RS14885 PF04545 Sigma-70, region 4 CJD35_RS14885 PF04539 Sigma-70 region 3 CJD35_RS14885 PF00140 Sigma-70 factor, region 1.2 CJD35_RS14895 PF01434 Peptidase family M41 CJD35_RS14895 PF17862 AAA+ lid domain CJD35_RS14895 PF00004 ATPase family associated with various cellular activities (AAA) CJD35_RS14900 PF00593 TonB dependent receptor CJD35_RS14900 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS14915 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CJD35_RS14920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJD35_RS14920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJD35_RS14935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS14935 PF13426 PAS domain CJD35_RS14935 PF00072 Response regulator receiver domain CJD35_RS14945 PF00111 2Fe-2S iron-sulfur cluster binding domain CJD35_RS14955 PF00593 TonB dependent receptor CJD35_RS14955 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS14970 PF00171 Aldehyde dehydrogenase family CJD35_RS14980 PF00106 short chain dehydrogenase CJD35_RS14985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJD35_RS14985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJD35_RS14990 PF00561 alpha/beta hydrolase fold CJD35_RS15000 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJD35_RS15010 PF00171 Aldehyde dehydrogenase family CJD35_RS15030 PF00202 Aminotransferase class-III CJD35_RS15035 PF03466 LysR substrate binding domain CJD35_RS15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS15040 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS15040 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS15045 PF00593 TonB dependent receptor CJD35_RS15045 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS15075 PF00356 Bacterial regulatory proteins, lacI family CJD35_RS15080 PF02806 Alpha amylase, C-terminal all-beta domain CJD35_RS15080 PF00128 Alpha amylase, catalytic domain CJD35_RS15080 PF03714 Bacterial pullanase-associated domain CJD35_RS15085 PF00128 Alpha amylase, catalytic domain CJD35_RS15090 PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation CJD35_RS15090 PF10566 Glycoside hydrolase 97 CJD35_RS15090 PF14508 Glycosyl-hydrolase 97 N-terminal CJD35_RS15105 PF13439 Glycosyltransferase Family 4 CJD35_RS15105 PF00534 Glycosyl transferases group 1 CJD35_RS15110 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CJD35_RS15125 PF01548 Transposase CJD35_RS15125 PF02371 Transposase IS116/IS110/IS902 family CJD35_RS15130 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS15130 PF00593 TonB dependent receptor CJD35_RS15135 PF01526 Tn3 transposase DDE domain CJD35_RS15135 PF13700 Domain of unknown function (DUF4158) CJD35_RS15140 PF00239 Resolvase, N terminal domain CJD35_RS15140 PF02796 Helix-turn-helix domain of resolvase CJD35_RS15165 PF00005 ABC transporter CJD35_RS15170 PF00593 TonB dependent receptor CJD35_RS15170 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS15185 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJD35_RS15185 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJD35_RS15190 PF00665 Integrase core domain CJD35_RS15195 PF01695 IstB-like ATP binding protein CJD35_RS15210 PF05401 Nodulation protein S (NodS) CJD35_RS15215 PF00535 Glycosyl transferase family 2 CJD35_RS15215 PF02709 N-terminal domain of galactosyltransferase CJD35_RS15220 PF01575 MaoC like domain CJD35_RS15225 PF03328 HpcH/HpaI aldolase/citrate lyase family CJD35_RS15235 PF01494 FAD binding domain CJD35_RS15245 PF02675 S-adenosylmethionine decarboxylase CJD35_RS15295 PF13683 Integrase core domain CJD35_RS15315 PF00067 Cytochrome P450 CJD35_RS15330 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS15330 PF00593 TonB dependent receptor CJD35_RS15340 PF07690 Major Facilitator Superfamily CJD35_RS15355 PF07690 Major Facilitator Superfamily CJD35_RS15390 PF01636 Phosphotransferase enzyme family CJD35_RS15410 PF13350 Tyrosine phosphatase family CJD35_RS15435 PF00111 2Fe-2S iron-sulfur cluster binding domain CJD35_RS15445 PF18665 Tetracyclin repressor-like, C-terminal domain CJD35_RS15445 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS15450 PF00355 Rieske [2Fe-2S] domain CJD35_RS15465 PF00890 FAD binding domain CJD35_RS15475 PF01983 Guanylyl transferase CofC like CJD35_RS15480 PF01933 Uncharacterised protein family UPF0052 CJD35_RS15485 PF00881 Nitroreductase family CJD35_RS15485 PF01996 F420-0:Gamma-glutamyl ligase CJD35_RS15495 PF04055 Radical SAM superfamily CJD35_RS15500 PF00296 Luciferase-like monooxygenase CJD35_RS15505 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS15505 PF00593 TonB dependent receptor CJD35_RS15510 PF02515 CoA-transferase family III CJD35_RS15520 PF17874 MalT-like TPR region CJD35_RS15520 PF00196 Bacterial regulatory proteins, luxR family CJD35_RS15525 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS15525 PF00107 Zinc-binding dehydrogenase CJD35_RS15545 PF01575 MaoC like domain CJD35_RS15550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS15550 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS15550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS15555 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS15555 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJD35_RS15555 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJD35_RS15560 PF00108 Thiolase, N-terminal domain CJD35_RS15560 PF02803 Thiolase, C-terminal domain CJD35_RS15565 PF00501 AMP-binding enzyme CJD35_RS15565 PF13193 AMP-binding enzyme C-terminal domain CJD35_RS15575 PF00392 Bacterial regulatory proteins, gntR family CJD35_RS15575 PF07729 FCD domain CJD35_RS15580 PF01557 Fumarylacetoacetate (FAA) hydrolase family CJD35_RS15585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CJD35_RS15600 PF03358 NADPH-dependent FMN reductase CJD35_RS15605 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS15605 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS15605 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS15645 PF13577 SnoaL-like domain CJD35_RS15650 PF13360 PQQ-like domain CJD35_RS15660 PF00107 Zinc-binding dehydrogenase CJD35_RS15660 PF16884 N-terminal domain of oxidoreductase CJD35_RS15665 PF00106 short chain dehydrogenase CJD35_RS15670 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJD35_RS15680 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJD35_RS15680 PF00355 Rieske [2Fe-2S] domain CJD35_RS15685 PF00866 Ring hydroxylating beta subunit CJD35_RS15690 PF18113 Rubredoxin binding C-terminal domain CJD35_RS15690 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS15700 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS15705 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS15710 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS15710 PF00107 Zinc-binding dehydrogenase CJD35_RS15715 PF00132 Bacterial transferase hexapeptide (six repeats) CJD35_RS15720 PF00881 Nitroreductase family CJD35_RS15725 PF00067 Cytochrome P450 CJD35_RS15730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS15730 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS15730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS15760 PF00106 short chain dehydrogenase CJD35_RS15765 PF01593 Flavin containing amine oxidoreductase CJD35_RS15775 PF06441 Epoxide hydrolase N terminus CJD35_RS15785 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJD35_RS15785 PF00355 Rieske [2Fe-2S] domain CJD35_RS15810 PF02798 Glutathione S-transferase, N-terminal domain CJD35_RS15840 PF00510 Cytochrome c oxidase subunit III CJD35_RS15865 PF00296 Luciferase-like monooxygenase CJD35_RS15885 PF00248 Aldo/keto reductase family CJD35_RS15890 PF01979 Amidohydrolase family CJD35_RS15895 PF01548 Transposase CJD35_RS15895 PF02371 Transposase IS116/IS110/IS902 family CJD35_RS15900 PF07969 Amidohydrolase family CJD35_RS15905 PF05893 Acyl-CoA reductase (LuxC) CJD35_RS15920 PF07690 Major Facilitator Superfamily CJD35_RS15925 PF00593 TonB dependent receptor CJD35_RS15925 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS15945 PF00593 TonB dependent receptor CJD35_RS15945 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS15955 PF00732 GMC oxidoreductase CJD35_RS15955 PF05199 GMC oxidoreductase CJD35_RS15960 PF00171 Aldehyde dehydrogenase family CJD35_RS15980 PF02311 AraC-like ligand binding domain CJD35_RS15980 PF12833 Helix-turn-helix domain CJD35_RS15990 PF01464 Transglycosylase SLT domain CJD35_RS16000 PF10412 Type IV secretion-system coupling protein DNA-binding domain CJD35_RS16000 PF12615 F sex factor protein N terminal CJD35_RS16040 PF06224 Winged helix DNA-binding domain CJD35_RS16050 PF00216 Bacterial DNA-binding protein CJD35_RS16060 PF09386 Antitoxin ParD CJD35_RS16085 PF01119 DNA mismatch repair protein, C-terminal domain CJD35_RS16085 PF08676 MutL C terminal dimerisation domain CJD35_RS16095 PF00589 Phage integrase family CJD35_RS16100 PF00589 Phage integrase family CJD35_RS16105 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS16105 PF00589 Phage integrase family CJD35_RS16115 PF02195 ParB-like nuclease domain CJD35_RS16115 PF17762 HTH domain found in ParB protein CJD35_RS16140 PF03881 Fructosamine kinase CJD35_RS16155 PF00216 Bacterial DNA-binding protein CJD35_RS16160 PF03472 Autoinducer binding domain CJD35_RS16160 PF00196 Bacterial regulatory proteins, luxR family CJD35_RS16165 PF00765 Autoinducer synthase CJD35_RS16185 PF01850 PIN domain CJD35_RS16215 PF13356 Arm DNA-binding domain CJD35_RS16215 PF00589 Phage integrase family CJD35_RS16220 PF00872 Transposase, Mutator family CJD35_RS16225 PF00589 Phage integrase family CJD35_RS16225 PF14659 Phage integrase, N-terminal SAM-like domain CJD35_RS16225 PF13356 Arm DNA-binding domain CJD35_RS16260 PF00873 AcrB/AcrD/AcrF family CJD35_RS16280 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS16280 PF00593 TonB dependent receptor CJD35_RS16285 PF03055 Retinal pigment epithelial membrane protein CJD35_RS16290 PF00732 GMC oxidoreductase CJD35_RS16290 PF05199 GMC oxidoreductase CJD35_RS16295 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJD35_RS16295 PF13360 PQQ-like domain CJD35_RS16325 PF00106 short chain dehydrogenase CJD35_RS16330 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS16350 PF00083 Sugar (and other) transporter CJD35_RS16355 PF12867 DinB superfamily CJD35_RS16355 PF03781 Sulfatase-modifying factor enzyme 1 CJD35_RS16365 PF00183 Hsp90 protein CJD35_RS16375 PF01571 Aminomethyltransferase folate-binding domain CJD35_RS16385 PF02219 Methylenetetrahydrofolate reductase CJD35_RS16390 PF00551 Formyl transferase CJD35_RS16395 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CJD35_RS16395 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CJD35_RS16405 PF07690 Major Facilitator Superfamily CJD35_RS16410 PF07690 Major Facilitator Superfamily CJD35_RS16440 PF13607 Succinyl-CoA ligase like flavodoxin domain CJD35_RS16440 PF13380 CoA binding domain CJD35_RS16445 PF12802 MarR family CJD35_RS16450 PF00171 Aldehyde dehydrogenase family CJD35_RS16480 PF00593 TonB dependent receptor CJD35_RS16480 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS16490 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJD35_RS16500 PF01266 FAD dependent oxidoreductase CJD35_RS16505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CJD35_RS16510 PF00528 Binding-protein-dependent transport system inner membrane component CJD35_RS16520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CJD35_RS16520 PF00005 ABC transporter CJD35_RS16530 PF04324 BFD-like [2Fe-2S] binding domain CJD35_RS16530 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS16535 PF01266 FAD dependent oxidoreductase CJD35_RS16540 PF00989 PAS fold CJD35_RS16540 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS16540 PF00497 Bacterial extracellular solute-binding proteins, family 3 CJD35_RS16540 PF01627 Hpt domain CJD35_RS16540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS16540 PF00072 Response regulator receiver domain CJD35_RS16545 PF00196 Bacterial regulatory proteins, luxR family CJD35_RS16545 PF00072 Response regulator receiver domain CJD35_RS16575 PF00171 Aldehyde dehydrogenase family CJD35_RS16585 PF00171 Aldehyde dehydrogenase family CJD35_RS16590 PF00180 Isocitrate/isopropylmalate dehydrogenase CJD35_RS16595 PF00202 Aminotransferase class-III CJD35_RS16600 PF01037 Lrp/AsnC ligand binding domain CJD35_RS16605 PF07687 Peptidase dimerisation domain CJD35_RS16605 PF01546 Peptidase family M20/M25/M40 CJD35_RS16625 PF00884 Sulfatase CJD35_RS16630 PF07690 Major Facilitator Superfamily CJD35_RS16635 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJD35_RS16635 PF13360 PQQ-like domain CJD35_RS16645 PF03466 LysR substrate binding domain CJD35_RS16645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS16655 PF07690 Major Facilitator Superfamily CJD35_RS16665 PF00171 Aldehyde dehydrogenase family CJD35_RS16680 PF00732 GMC oxidoreductase CJD35_RS16680 PF05199 GMC oxidoreductase CJD35_RS16685 PF05275 Copper resistance protein B precursor (CopB) CJD35_RS16690 PF07731 Multicopper oxidase CJD35_RS16690 PF07732 Multicopper oxidase CJD35_RS16690 PF00394 Multicopper oxidase CJD35_RS16695 PF04542 Sigma-70 region 2 CJD35_RS16695 PF08281 Sigma-70, region 4 CJD35_RS16700 PF13801 Heavy-metal resistance CJD35_RS16710 PF04234 CopC domain CJD35_RS16715 PF05425 Copper resistance protein D CJD35_RS16730 PF00005 ABC transporter CJD35_RS16735 PF13472 GDSL-like Lipase/Acylhydrolase family CJD35_RS16740 PF13614 AAA domain CJD35_RS16760 PF00171 Aldehyde dehydrogenase family CJD35_RS16765 PF00106 short chain dehydrogenase CJD35_RS16770 PF01738 Dienelactone hydrolase family CJD35_RS16775 PF00248 Aldo/keto reductase family CJD35_RS16790 PF00563 EAL domain CJD35_RS16790 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS16790 PF03707 Bacterial signalling protein N terminal repeat CJD35_RS16790 PF13188 PAS domain CJD35_RS16795 PF04909 Amidohydrolase CJD35_RS16800 PF04303 PrpF protein CJD35_RS16805 PF03737 Aldolase/RraA CJD35_RS16810 PF03466 LysR substrate binding domain CJD35_RS16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS16820 PF04909 Amidohydrolase CJD35_RS16825 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CJD35_RS16830 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJD35_RS16835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJD35_RS16845 PF12833 Helix-turn-helix domain CJD35_RS16845 PF14525 AraC-binding-like domain CJD35_RS16850 PF07690 Major Facilitator Superfamily CJD35_RS16860 PF01494 FAD binding domain CJD35_RS16895 PF02321 Outer membrane efflux protein CJD35_RS16905 PF02321 Outer membrane efflux protein CJD35_RS16910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJD35_RS16910 PF00529 HlyD membrane-fusion protein of T1SS CJD35_RS16920 PF01695 IstB-like ATP binding protein CJD35_RS16925 PF00665 Integrase core domain CJD35_RS16935 PF10503 Esterase PHB depolymerase CJD35_RS16940 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJD35_RS16940 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CJD35_RS16955 PF02492 CobW/HypB/UreG, nucleotide-binding domain CJD35_RS16955 PF07683 Cobalamin synthesis protein cobW C-terminal domain CJD35_RS16960 PF01502 Phosphoribosyl-AMP cyclohydrolase CJD35_RS16995 PF03861 ANTAR domain CJD35_RS16995 PF08376 Nitrate and nitrite sensing CJD35_RS17000 PF00005 ABC transporter CJD35_RS17005 PF07690 Major Facilitator Superfamily CJD35_RS17015 PF04324 BFD-like [2Fe-2S] binding domain CJD35_RS17015 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CJD35_RS17015 PF18267 Rubredoxin NAD+ reductase C-terminal domain CJD35_RS17015 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS17015 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CJD35_RS17020 PF00355 Rieske [2Fe-2S] domain CJD35_RS17025 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CJD35_RS17025 PF04324 BFD-like [2Fe-2S] binding domain CJD35_RS17025 PF01568 Molydopterin dinucleotide binding domain CJD35_RS17025 PF00384 Molybdopterin oxidoreductase CJD35_RS17030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CJD35_RS17030 PF14824 Sirohaem biosynthesis protein central CJD35_RS17030 PF10414 Sirohaem synthase dimerisation region CJD35_RS17035 PF09856 Predicted transcriptional regulator (DUF2083) CJD35_RS17035 PF06114 IrrE N-terminal-like domain CJD35_RS17035 PF01381 Helix-turn-helix CJD35_RS17040 PF00330 Aconitase family (aconitate hydratase) CJD35_RS17040 PF00694 Aconitase C-terminal domain CJD35_RS17050 PF00285 Citrate synthase, C-terminal domain CJD35_RS17060 PF04303 PrpF protein CJD35_RS17065 PF00330 Aconitase family (aconitate hydratase) CJD35_RS17065 PF00694 Aconitase C-terminal domain CJD35_RS17070 PF08267 Cobalamin-independent synthase, N-terminal domain CJD35_RS17070 PF01717 Cobalamin-independent synthase, Catalytic domain CJD35_RS17085 PF03737 Aldolase/RraA CJD35_RS17110 PF00753 Metallo-beta-lactamase superfamily CJD35_RS17110 PF16123 Hydroxyacylglutathione hydrolase C-terminus CJD35_RS17115 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJD35_RS17115 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJD35_RS17115 PF01842 ACT domain CJD35_RS17120 PF07690 Major Facilitator Superfamily CJD35_RS17130 PF00375 Sodium:dicarboxylate symporter family CJD35_RS17140 PF00593 TonB dependent receptor CJD35_RS17140 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS17145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS17145 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS17150 PF00072 Response regulator receiver domain CJD35_RS17150 PF02954 Bacterial regulatory protein, Fis family CJD35_RS17150 PF00158 Sigma-54 interaction domain CJD35_RS17155 PF00480 ROK family CJD35_RS17160 PF02435 Levansucrase/Invertase CJD35_RS17175 PF00356 Bacterial regulatory proteins, lacI family CJD35_RS17190 PF00664 ABC transporter transmembrane region CJD35_RS17190 PF00005 ABC transporter CJD35_RS17190 PF03412 Peptidase C39 family CJD35_RS17195 PF00120 Glutamine synthetase, catalytic domain CJD35_RS17200 PF00202 Aminotransferase class-III CJD35_RS17215 PF00117 Glutamine amidotransferase class-I CJD35_RS17215 PF00958 GMP synthase C terminal domain CJD35_RS17215 PF02540 NAD synthase CJD35_RS17225 PF00392 Bacterial regulatory proteins, gntR family CJD35_RS17225 PF07729 FCD domain CJD35_RS17230 PF01266 FAD dependent oxidoreductase CJD35_RS17235 PF00665 Integrase core domain CJD35_RS17240 PF01695 IstB-like ATP binding protein CJD35_RS17255 PF13545 Crp-like helix-turn-helix domain CJD35_RS17255 PF00027 Cyclic nucleotide-binding domain CJD35_RS17260 PF06965 Na+/H+ antiporter 1 CJD35_RS17270 PF00999 Sodium/hydrogen exchanger family CJD35_RS17275 PF10011 Predicted membrane protein (DUF2254) CJD35_RS17280 PF00654 Voltage gated chloride channel CJD35_RS17290 PF02322 Cytochrome bd terminal oxidase subunit II CJD35_RS17295 PF01654 Cytochrome bd terminal oxidase subunit I CJD35_RS17300 PF01925 Sulfite exporter TauE/SafE CJD35_RS17315 PF04143 Sulphur transport CJD35_RS17320 PF00753 Metallo-beta-lactamase superfamily CJD35_RS17325 PF10417 C-terminal domain of 1-Cys peroxiredoxin CJD35_RS17325 PF00578 AhpC/TSA family CJD35_RS17340 PF00534 Glycosyl transferases group 1 CJD35_RS17375 PF13593 SBF-like CPA transporter family (DUF4137) CJD35_RS17380 PF01425 Amidase CJD35_RS17385 PF00860 Permease family CJD35_RS17390 PF01048 Phosphorylase superfamily CJD35_RS17400 PF07687 Peptidase dimerisation domain CJD35_RS17400 PF01546 Peptidase family M20/M25/M40 CJD35_RS17405 PF00266 Aminotransferase class-V CJD35_RS17425 PF13454 FAD-NAD(P)-binding CJD35_RS17430 PF00576 HIUase/Transthyretin family CJD35_RS17435 PF03450 CO dehydrogenase flavoprotein C-terminal domain CJD35_RS17435 PF00941 FAD binding domain in molybdopterin dehydrogenase CJD35_RS17440 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJD35_RS17440 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJD35_RS17445 PF13478 XdhC Rossmann domain CJD35_RS17445 PF02625 XdhC and CoxI family CJD35_RS17450 PF01979 Amidohydrolase family CJD35_RS17455 PF00962 Adenosine/AMP deaminase CJD35_RS17465 PF03641 Possible lysine decarboxylase CJD35_RS17470 PF00156 Phosphoribosyl transferase domain CJD35_RS17475 PF03466 LysR substrate binding domain CJD35_RS17475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS17480 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS17480 PF00593 TonB dependent receptor CJD35_RS17495 PF00962 Adenosine/AMP deaminase CJD35_RS17525 PF01037 Lrp/AsnC ligand binding domain CJD35_RS17530 PF01168 Alanine racemase, N-terminal domain CJD35_RS17530 PF00842 Alanine racemase, C-terminal domain CJD35_RS17535 PF01266 FAD dependent oxidoreductase CJD35_RS17540 PF01042 Endoribonuclease L-PSP CJD35_RS17545 PF00216 Bacterial DNA-binding protein CJD35_RS17550 PF01432 Peptidase family M3 CJD35_RS17555 PF03070 TENA/THI-4/PQQC family CJD35_RS17560 PF00593 TonB dependent receptor CJD35_RS17560 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS17570 PF07690 Major Facilitator Superfamily CJD35_RS17575 PF00171 Aldehyde dehydrogenase family CJD35_RS17585 PF12833 Helix-turn-helix domain CJD35_RS17590 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS17590 PF00593 TonB dependent receptor CJD35_RS17595 PF00107 Zinc-binding dehydrogenase CJD35_RS17595 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS17600 PF00171 Aldehyde dehydrogenase family CJD35_RS17610 PF00043 Glutathione S-transferase, C-terminal domain CJD35_RS17610 PF02798 Glutathione S-transferase, N-terminal domain CJD35_RS17615 PF02798 Glutathione S-transferase, N-terminal domain CJD35_RS17615 PF00043 Glutathione S-transferase, C-terminal domain CJD35_RS17625 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS17625 PF17932 Tetracyclin repressor-like, C-terminal domain CJD35_RS17630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CJD35_RS17630 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS17630 PF02770 Acyl-CoA dehydrogenase, middle domain CJD35_RS17635 PF02803 Thiolase, C-terminal domain CJD35_RS17635 PF00108 Thiolase, N-terminal domain CJD35_RS17640 PF00106 short chain dehydrogenase CJD35_RS17645 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS17650 PF00108 Thiolase, N-terminal domain CJD35_RS17650 PF02803 Thiolase, C-terminal domain CJD35_RS17655 PF03060 Nitronate monooxygenase CJD35_RS17660 PF00128 Alpha amylase, catalytic domain CJD35_RS17675 PF05853 beta-keto acid cleavage enzyme CJD35_RS17680 PF00106 short chain dehydrogenase CJD35_RS17700 PF13193 AMP-binding enzyme C-terminal domain CJD35_RS17700 PF00501 AMP-binding enzyme CJD35_RS17710 PF00043 Glutathione S-transferase, C-terminal domain CJD35_RS17710 PF02798 Glutathione S-transferase, N-terminal domain CJD35_RS17715 PF00593 TonB dependent receptor CJD35_RS17715 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS17720 PF01047 MarR family CJD35_RS17725 PF03055 Retinal pigment epithelial membrane protein CJD35_RS17730 PF07690 Major Facilitator Superfamily CJD35_RS17740 PF00171 Aldehyde dehydrogenase family CJD35_RS17755 PF00106 short chain dehydrogenase CJD35_RS17765 PF00034 Cytochrome c CJD35_RS17770 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS17770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS17770 PF00672 HAMP domain CJD35_RS17775 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS17775 PF00072 Response regulator receiver domain CJD35_RS17780 PF00529 HlyD membrane-fusion protein of T1SS CJD35_RS17780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CJD35_RS17785 PF00873 AcrB/AcrD/AcrF family CJD35_RS17790 PF02321 Outer membrane efflux protein CJD35_RS17810 PF07291 Methylamine utilisation protein MauE CJD35_RS17815 PF00578 AhpC/TSA family CJD35_RS17820 PF02975 Methylamine dehydrogenase, L chain CJD35_RS17830 PF00593 TonB dependent receptor CJD35_RS17830 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS17835 PF13181 Tetratricopeptide repeat CJD35_RS17875 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJD35_RS17880 PF00111 2Fe-2S iron-sulfur cluster binding domain CJD35_RS17880 PF01799 [2Fe-2S] binding domain CJD35_RS17885 PF03193 RsgA GTPase CJD35_RS17890 PF08666 SAF domain CJD35_RS17890 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CJD35_RS17910 PF10503 Esterase PHB depolymerase CJD35_RS17925 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CJD35_RS17925 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CJD35_RS17930 PF01266 FAD dependent oxidoreductase CJD35_RS17930 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CJD35_RS17935 PF00455 DeoR C terminal sensor domain CJD35_RS17935 PF08220 DeoR-like helix-turn-helix domain CJD35_RS17945 PF00561 alpha/beta hydrolase fold CJD35_RS17950 PF00593 TonB dependent receptor CJD35_RS17950 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS17955 PF02735 Ku70/Ku80 beta-barrel domain CJD35_RS17960 PF02308 MgtC family CJD35_RS17965 PF01068 ATP dependent DNA ligase domain CJD35_RS17965 PF04679 ATP dependent DNA ligase C terminal region CJD35_RS17965 PF13298 DNA polymerase Ligase (LigD) CJD35_RS17985 PF04545 Sigma-70, region 4 CJD35_RS17985 PF04542 Sigma-70 region 2 CJD35_RS17990 PF06532 Negative regulator of sigma F CJD35_RS18000 PF05114 Protein of unknown function (DUF692) CJD35_RS18010 PF02028 BCCT, betaine/carnitine/choline family transporter CJD35_RS18015 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CJD35_RS18015 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CJD35_RS18015 PF00205 Thiamine pyrophosphate enzyme, central domain CJD35_RS18020 PF01645 Conserved region in glutamate synthase CJD35_RS18045 PF04679 ATP dependent DNA ligase C terminal region CJD35_RS18045 PF13298 DNA polymerase Ligase (LigD) CJD35_RS18045 PF01068 ATP dependent DNA ligase domain CJD35_RS18050 PF03372 Endonuclease/Exonuclease/phosphatase family CJD35_RS18075 PF00196 Bacterial regulatory proteins, luxR family CJD35_RS18075 PF00072 Response regulator receiver domain CJD35_RS18080 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS18080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS18080 PF00989 PAS fold CJD35_RS18105 PF00042 Globin CJD35_RS18105 PF00175 Oxidoreductase NAD-binding domain CJD35_RS18105 PF00970 Oxidoreductase FAD-binding domain CJD35_RS18115 PF00582 Universal stress protein family CJD35_RS18125 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJD35_RS18125 PF00361 Proton-conducting membrane transporter CJD35_RS18125 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CJD35_RS18125 PF13244 Domain of unknown function (DUF4040) CJD35_RS18130 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJD35_RS18140 PF01899 Na+/H+ ion antiporter subunit CJD35_RS18145 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CJD35_RS18150 PF03334 Na+/H+ antiporter subunit CJD35_RS18155 PF13188 PAS domain CJD35_RS18155 PF00563 EAL domain CJD35_RS18155 PF03707 Bacterial signalling protein N terminal repeat CJD35_RS18155 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS18165 PF03466 LysR substrate binding domain CJD35_RS18165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS18180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJD35_RS18190 PF00106 short chain dehydrogenase CJD35_RS18200 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJD35_RS18200 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS18205 PF01965 DJ-1/PfpI family CJD35_RS18210 PF17755 UvrA DNA-binding domain CJD35_RS18215 PF00872 Transposase, Mutator family CJD35_RS18220 PF00107 Zinc-binding dehydrogenase CJD35_RS18220 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS18225 PF02583 Metal-sensitive transcriptional repressor CJD35_RS18235 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS18290 PF01556 DnaJ C terminal domain CJD35_RS18290 PF00226 DnaJ domain CJD35_RS18300 PF02803 Thiolase, C-terminal domain CJD35_RS18300 PF00108 Thiolase, N-terminal domain CJD35_RS18315 PF00106 short chain dehydrogenase CJD35_RS18320 PF00111 2Fe-2S iron-sulfur cluster binding domain CJD35_RS18320 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJD35_RS18320 PF01799 [2Fe-2S] binding domain CJD35_RS18325 PF00941 FAD binding domain in molybdopterin dehydrogenase CJD35_RS18325 PF03450 CO dehydrogenase flavoprotein C-terminal domain CJD35_RS18330 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJD35_RS18330 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJD35_RS18350 PF00072 Response regulator receiver domain CJD35_RS18350 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS18360 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CJD35_RS18360 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJD35_RS18370 PF01272 Transcription elongation factor, GreA/GreB, C-term CJD35_RS18370 PF03449 Transcription elongation factor, N-terminal CJD35_RS18380 PF00313 'Cold-shock' DNA-binding domain CJD35_RS18425 PF00266 Aminotransferase class-V CJD35_RS18460 PF00107 Zinc-binding dehydrogenase CJD35_RS18460 PF13823 Alcohol dehydrogenase GroES-associated CJD35_RS18460 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS18465 PF00072 Response regulator receiver domain CJD35_RS18490 PF00183 Hsp90 protein CJD35_RS18495 PF02594 Uncharacterised ACR, YggU family COG1872 CJD35_RS18500 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CJD35_RS18500 PF00072 Response regulator receiver domain CJD35_RS18500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS18500 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS18500 PF01627 Hpt domain CJD35_RS18500 PF00672 HAMP domain CJD35_RS18505 PF01739 CheR methyltransferase, SAM binding domain CJD35_RS18505 PF03705 CheR methyltransferase, all-alpha domain CJD35_RS18510 PF01339 CheB methylesterase CJD35_RS18515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS18515 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS18540 PF01464 Transglycosylase SLT domain CJD35_RS18610 PF12477 Sex factor F TraW protein N terminal CJD35_RS18620 PF06834 TraU protein CJD35_RS18645 PF06122 Conjugative relaxosome accessory transposon protein CJD35_RS18665 PF01027 Inhibitor of apoptosis-promoting Bax1 CJD35_RS18675 PF00550 Phosphopantetheine attachment site CJD35_RS18695 PF03831 PhnA domain CJD35_RS18695 PF08274 PhnA Zinc-Ribbon CJD35_RS18700 PF00999 Sodium/hydrogen exchanger family CJD35_RS18710 PF00072 Response regulator receiver domain CJD35_RS18710 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS18715 PF03109 ABC1 family CJD35_RS18720 PF08379 Bacterial transglutaminase-like N-terminal region CJD35_RS18720 PF01841 Transglutaminase-like superfamily CJD35_RS18755 PF06233 Usg-like family CJD35_RS18765 PF00166 Chaperonin 10 Kd subunit CJD35_RS18770 PF00118 TCP-1/cpn60 chaperonin family CJD35_RS18775 PF00483 Nucleotidyl transferase CJD35_RS18775 PF01050 Mannose-6-phosphate isomerase CJD35_RS18780 PF01238 Phosphomannose isomerase type I CJD35_RS18785 PF00534 Glycosyl transferases group 1 CJD35_RS18795 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CJD35_RS18795 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CJD35_RS18795 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CJD35_RS18795 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CJD35_RS18800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS18800 PF13426 PAS domain CJD35_RS18800 PF00072 Response regulator receiver domain CJD35_RS18805 PF07536 HWE histidine kinase CJD35_RS18805 PF13426 PAS domain CJD35_RS18810 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS18815 PF00595 PDZ domain CJD35_RS18825 PF00011 Hsp20/alpha crystallin family CJD35_RS18830 PF00011 Hsp20/alpha crystallin family CJD35_RS18835 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS18845 PF04545 Sigma-70, region 4 CJD35_RS18845 PF04542 Sigma-70 region 2 CJD35_RS18845 PF00140 Sigma-70 factor, region 1.2 CJD35_RS18855 PF00589 Phage integrase family CJD35_RS18860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJD35_RS18860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJD35_RS18865 PF00563 EAL domain CJD35_RS18865 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS18865 PF13188 PAS domain CJD35_RS18865 PF03707 Bacterial signalling protein N terminal repeat CJD35_RS18870 PF00872 Transposase, Mutator family CJD35_RS18875 PF00999 Sodium/hydrogen exchanger family CJD35_RS18875 PF02254 TrkA-N domain CJD35_RS18880 PF00216 Bacterial DNA-binding protein CJD35_RS18900 PF13426 PAS domain CJD35_RS18900 PF08447 PAS fold CJD35_RS18900 PF07536 HWE histidine kinase CJD35_RS18925 PF18272 single-stranded DNA binding TraI N-terminal subdomain CJD35_RS18925 PF08751 TrwC relaxase CJD35_RS18925 PF18340 DNA relaxase TraI 2B/2B-like domain CJD35_RS18925 PF07057 DNA helicase TraI CJD35_RS18985 PF03600 Citrate transporter CJD35_RS18985 PF02080 TrkA-C domain CJD35_RS19015 PF03230 Antirestriction protein CJD35_RS19035 PF00210 Ferritin-like domain CJD35_RS19100 PF00589 Phage integrase family CJD35_RS19100 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS19110 PF16916 Dimerisation domain of Zinc Transporter CJD35_RS19110 PF01545 Cation efflux family CJD35_RS19115 PF02583 Metal-sensitive transcriptional repressor CJD35_RS19120 PF09828 Chromate resistance exported protein CJD35_RS19125 PF02417 Chromate transporter CJD35_RS19130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJD35_RS19200 PF00589 Phage integrase family CJD35_RS19200 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS19205 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS19205 PF00589 Phage integrase family CJD35_RS19210 PF00589 Phage integrase family CJD35_RS19210 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS19220 PF00589 Phage integrase family CJD35_RS19225 PF00589 Phage integrase family CJD35_RS19230 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS19230 PF00589 Phage integrase family CJD35_RS19240 PF05443 ROS/MUCR transcriptional regulator protein CJD35_RS19280 PF00534 Glycosyl transferases group 1 CJD35_RS19280 PF13439 Glycosyltransferase Family 4 CJD35_RS19300 PF17284 Spermidine synthase tetramerisation domain CJD35_RS19315 PF13180 PDZ domain CJD35_RS19345 PF07015 VirC1 protein CJD35_RS19355 PF00239 Resolvase, N terminal domain CJD35_RS19365 PF13700 Domain of unknown function (DUF4158) CJD35_RS19365 PF01526 Tn3 transposase DDE domain CJD35_RS19370 PF02796 Helix-turn-helix domain of resolvase CJD35_RS19370 PF00239 Resolvase, N terminal domain CJD35_RS19375 PF13700 Domain of unknown function (DUF4158) CJD35_RS19375 PF01526 Tn3 transposase DDE domain CJD35_RS19380 PF13700 Domain of unknown function (DUF4158) CJD35_RS19380 PF01526 Tn3 transposase DDE domain CJD35_RS19405 PF09084 NMT1/THI5 like CJD35_RS19410 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CJD35_RS19410 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CJD35_RS19415 PF00355 Rieske [2Fe-2S] domain CJD35_RS19420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJD35_RS19420 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJD35_RS19425 PF09084 NMT1/THI5 like CJD35_RS19435 PF01047 MarR family CJD35_RS19440 PF00144 Beta-lactamase CJD35_RS19450 PF00144 Beta-lactamase CJD35_RS19455 PF01047 MarR family CJD35_RS19460 PF01527 Transposase CJD35_RS19475 PF13683 Integrase core domain CJD35_RS19480 PF00355 Rieske [2Fe-2S] domain CJD35_RS19480 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJD35_RS19485 PF00866 Ring hydroxylating beta subunit CJD35_RS19490 PF00872 Transposase, Mutator family CJD35_RS19505 PF12833 Helix-turn-helix domain CJD35_RS19510 PF02625 XdhC and CoxI family CJD35_RS19510 PF13478 XdhC Rossmann domain CJD35_RS19515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJD35_RS19515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJD35_RS19520 PF01842 ACT domain CJD35_RS19520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CJD35_RS19520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CJD35_RS19525 PF13660 Domain of unknown function (DUF4147) CJD35_RS19525 PF05161 MOFRL family CJD35_RS19530 PF13660 Domain of unknown function (DUF4147) CJD35_RS19530 PF05161 MOFRL family CJD35_RS19535 PF12804 MobA-like NTP transferase domain CJD35_RS19545 PF04909 Amidohydrolase CJD35_RS19550 PF04303 PrpF protein CJD35_RS19555 PF03737 Aldolase/RraA CJD35_RS19560 PF03466 LysR substrate binding domain CJD35_RS19560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS19570 PF04909 Amidohydrolase CJD35_RS19580 PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit CJD35_RS19585 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CJD35_RS19595 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJD35_RS19600 PF00248 Aldo/keto reductase family CJD35_RS19605 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS19610 PF00171 Aldehyde dehydrogenase family CJD35_RS19615 PF01695 IstB-like ATP binding protein CJD35_RS19620 PF00665 Integrase core domain CJD35_RS19630 PF06463 Molybdenum Cofactor Synthesis C CJD35_RS19630 PF04055 Radical SAM superfamily CJD35_RS19640 PF09084 NMT1/THI5 like CJD35_RS19645 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CJD35_RS19645 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CJD35_RS19650 PF00355 Rieske [2Fe-2S] domain CJD35_RS19655 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CJD35_RS19655 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CJD35_RS19660 PF00111 2Fe-2S iron-sulfur cluster binding domain CJD35_RS19665 PF14759 Reductase C-terminal CJD35_RS19665 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS19715 PF07178 TraL protein CJD35_RS19765 PF12477 Sex factor F TraW protein N terminal CJD35_RS19775 PF06834 TraU protein CJD35_RS19795 PF06122 Conjugative relaxosome accessory transposon protein CJD35_RS19815 PF09278 MerR, DNA binding CJD35_RS19815 PF00376 MerR family regulatory protein CJD35_RS19825 PF00216 Bacterial DNA-binding protein CJD35_RS19835 PF01734 Patatin-like phospholipase CJD35_RS19875 PF00589 Phage integrase family CJD35_RS19880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJD35_RS19880 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS19885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CJD35_RS19885 PF00364 Biotin-requiring enzyme CJD35_RS19885 PF02817 e3 binding domain CJD35_RS19890 PF02780 Transketolase, C-terminal domain CJD35_RS19890 PF00364 Biotin-requiring enzyme CJD35_RS19890 PF02779 Transketolase, pyrimidine binding domain CJD35_RS19895 PF00676 Dehydrogenase E1 component CJD35_RS19900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS19900 PF03466 LysR substrate binding domain CJD35_RS19920 PF18272 single-stranded DNA binding TraI N-terminal subdomain CJD35_RS19920 PF07057 DNA helicase TraI CJD35_RS19920 PF18340 DNA relaxase TraI 2B/2B-like domain CJD35_RS19920 PF08751 TrwC relaxase CJD35_RS19985 PF03831 PhnA domain CJD35_RS19985 PF08274 PhnA Zinc-Ribbon CJD35_RS19990 PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain CJD35_RS19990 PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain CJD35_RS20000 PF00916 Sulfate permease family CJD35_RS20000 PF01740 STAS domain CJD35_RS20085 PF01119 DNA mismatch repair protein, C-terminal domain CJD35_RS20085 PF08676 MutL C terminal dimerisation domain CJD35_RS20100 PF05443 ROS/MUCR transcriptional regulator protein CJD35_RS20135 PF02195 ParB-like nuclease domain CJD35_RS20135 PF17762 HTH domain found in ParB protein CJD35_RS20155 PF00115 Cytochrome C and Quinol oxidase polypeptide I CJD35_RS20170 PF00970 Oxidoreductase FAD-binding domain CJD35_RS20170 PF00042 Globin CJD35_RS20170 PF00175 Oxidoreductase NAD-binding domain CJD35_RS20175 PF00027 Cyclic nucleotide-binding domain CJD35_RS20175 PF13545 Crp-like helix-turn-helix domain CJD35_RS20195 PF05443 ROS/MUCR transcriptional regulator protein CJD35_RS20280 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS20280 PF00589 Phage integrase family CJD35_RS20290 PF16916 Dimerisation domain of Zinc Transporter CJD35_RS20290 PF01545 Cation efflux family CJD35_RS20295 PF02583 Metal-sensitive transcriptional repressor CJD35_RS20300 PF09828 Chromate resistance exported protein CJD35_RS20305 PF02417 Chromate transporter CJD35_RS20310 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CJD35_RS20360 PF08401 Domain of unknown function (DUF1738) CJD35_RS20360 PF18818 Metallopeptidase superfamily domain CJD35_RS20375 PF13495 Phage integrase, N-terminal SAM-like domain CJD35_RS20375 PF00589 Phage integrase family CJD35_RS20380 PF18818 Metallopeptidase superfamily domain CJD35_RS20380 PF08401 Domain of unknown function (DUF1738) CJD35_RS20395 PF00589 Phage integrase family CJD35_RS20395 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS20400 PF00589 Phage integrase family CJD35_RS20400 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS20405 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS20405 PF00589 Phage integrase family CJD35_RS20415 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS20415 PF00589 Phage integrase family CJD35_RS20420 PF00589 Phage integrase family CJD35_RS20425 PF00589 Phage integrase family CJD35_RS20440 PF13614 AAA domain CJD35_RS20465 PF00239 Resolvase, N terminal domain CJD35_RS20475 PF13610 DDE domain CJD35_RS20480 PF00593 TonB dependent receptor CJD35_RS20480 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS20485 PF00196 Bacterial regulatory proteins, luxR family CJD35_RS20485 PF00072 Response regulator receiver domain CJD35_RS20490 PF00355 Rieske [2Fe-2S] domain CJD35_RS20490 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CJD35_RS20505 PF02796 Helix-turn-helix domain of resolvase CJD35_RS20505 PF00239 Resolvase, N terminal domain CJD35_RS20515 PF03524 Conjugal transfer protein CJD35_RS20520 PF03743 Bacterial conjugation TrbI-like protein CJD35_RS20535 PF01526 Tn3 transposase DDE domain CJD35_RS20535 PF13700 Domain of unknown function (DUF4158) CJD35_RS20540 PF01526 Tn3 transposase DDE domain CJD35_RS20540 PF13700 Domain of unknown function (DUF4158) CJD35_RS20550 PF07992 Pyridine nucleotide-disulphide oxidoreductase CJD35_RS20550 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CJD35_RS20550 PF00403 Heavy-metal-associated domain CJD35_RS20555 PF00403 Heavy-metal-associated domain CJD35_RS20560 PF02411 MerT mercuric transport protein CJD35_RS20565 PF13411 MerR HTH family regulatory protein CJD35_RS20570 PF00239 Resolvase, N terminal domain CJD35_RS20570 PF02796 Helix-turn-helix domain of resolvase CJD35_RS20580 PF13411 MerR HTH family regulatory protein CJD35_RS20600 PF07731 Multicopper oxidase CJD35_RS20600 PF07732 Multicopper oxidase CJD35_RS20610 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS20610 PF00107 Zinc-binding dehydrogenase CJD35_RS20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS20615 PF03466 LysR substrate binding domain CJD35_RS20630 PF13360 PQQ-like domain CJD35_RS20630 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CJD35_RS20635 PF00171 Aldehyde dehydrogenase family CJD35_RS20640 PF00501 AMP-binding enzyme CJD35_RS20640 PF13193 AMP-binding enzyme C-terminal domain CJD35_RS20645 PF02954 Bacterial regulatory protein, Fis family CJD35_RS20645 PF01590 GAF domain CJD35_RS20645 PF00158 Sigma-54 interaction domain CJD35_RS20655 PF01695 IstB-like ATP binding protein CJD35_RS20660 PF00665 Integrase core domain CJD35_RS20665 PF02796 Helix-turn-helix domain of resolvase CJD35_RS20665 PF00239 Resolvase, N terminal domain CJD35_RS20720 PF00183 Hsp90 protein CJD35_RS20725 PF02594 Uncharacterised ACR, YggU family COG1872 CJD35_RS20730 PF00072 Response regulator receiver domain CJD35_RS20730 PF01627 Hpt domain CJD35_RS20730 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CJD35_RS20730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS20730 PF00672 HAMP domain CJD35_RS20730 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS20735 PF01739 CheR methyltransferase, SAM binding domain CJD35_RS20735 PF03705 CheR methyltransferase, all-alpha domain CJD35_RS20740 PF01339 CheB methylesterase CJD35_RS20745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS20745 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS20760 PF13610 DDE domain CJD35_RS20765 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS20775 PF00378 Enoyl-CoA hydratase/isomerase CJD35_RS20775 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CJD35_RS20775 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CJD35_RS20790 PF00593 TonB dependent receptor CJD35_RS20790 PF07715 TonB-dependent Receptor Plug Domain CJD35_RS20800 PF01695 IstB-like ATP binding protein CJD35_RS20805 PF00665 Integrase core domain CJD35_RS20810 PF13700 Domain of unknown function (DUF4158) CJD35_RS20810 PF01526 Tn3 transposase DDE domain CJD35_RS20815 PF13700 Domain of unknown function (DUF4158) CJD35_RS20815 PF01526 Tn3 transposase DDE domain CJD35_RS20825 PF00106 short chain dehydrogenase CJD35_RS20845 PF02534 Type IV secretory system Conjugative DNA transfer CJD35_RS20850 PF00437 Type II/IV secretion system protein CJD35_RS20855 PF03743 Bacterial conjugation TrbI-like protein CJD35_RS20860 PF03524 Conjugal transfer protein CJD35_RS20865 PF04335 VirB8 protein CJD35_RS20890 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CJD35_RS20895 PF05101 Type IV secretory pathway, VirB3-like protein CJD35_RS20900 PF04956 TrbC/VIRB2 family CJD35_RS20905 PF01464 Transglycosylase SLT domain CJD35_RS20940 PF13700 Domain of unknown function (DUF4158) CJD35_RS20940 PF01526 Tn3 transposase DDE domain CJD35_RS20945 PF00239 Resolvase, N terminal domain CJD35_RS20945 PF02796 Helix-turn-helix domain of resolvase CJD35_RS20960 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CJD35_RS20960 PF01348 Type II intron maturase CJD35_RS20980 PF18818 Metallopeptidase superfamily domain CJD35_RS20980 PF08401 Domain of unknown function (DUF1738) CJD35_RS20990 PF02661 Fic/DOC family CJD35_RS20990 PF17841 BID domain of Bartonella effector protein (Bep) CJD35_RS21080 PF01381 Helix-turn-helix CJD35_RS21090 PF02796 Helix-turn-helix domain of resolvase CJD35_RS21090 PF00239 Resolvase, N terminal domain CJD35_RS21095 PF00436 Single-strand binding protein family CJD35_RS21110 PF13614 AAA domain CJD35_RS21115 PF17762 HTH domain found in ParB protein CJD35_RS21115 PF02195 ParB-like nuclease domain CJD35_RS21135 PF13700 Domain of unknown function (DUF4158) CJD35_RS21135 PF01526 Tn3 transposase DDE domain CJD35_RS21145 PF02796 Helix-turn-helix domain of resolvase CJD35_RS21145 PF00239 Resolvase, N terminal domain CJD35_RS21165 PF01068 ATP dependent DNA ligase domain CJD35_RS21165 PF13298 DNA polymerase Ligase (LigD) CJD35_RS21165 PF04679 ATP dependent DNA ligase C terminal region CJD35_RS21170 PF03372 Endonuclease/Exonuclease/phosphatase family CJD35_RS21195 PF00072 Response regulator receiver domain CJD35_RS21195 PF00196 Bacterial regulatory proteins, luxR family CJD35_RS21200 PF00989 PAS fold CJD35_RS21200 PF00512 His Kinase A (phospho-acceptor) domain CJD35_RS21200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CJD35_RS21225 PF00970 Oxidoreductase FAD-binding domain CJD35_RS21225 PF00042 Globin CJD35_RS21225 PF00175 Oxidoreductase NAD-binding domain CJD35_RS21235 PF00582 Universal stress protein family CJD35_RS21245 PF13244 Domain of unknown function (DUF4040) CJD35_RS21245 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter CJD35_RS21245 PF00361 Proton-conducting membrane transporter CJD35_RS21245 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CJD35_RS21250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CJD35_RS21260 PF01899 Na+/H+ ion antiporter subunit CJD35_RS21265 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CJD35_RS21270 PF03334 Na+/H+ antiporter subunit CJD35_RS21275 PF00990 Diguanylate cyclase, GGDEF domain CJD35_RS21275 PF13188 PAS domain CJD35_RS21275 PF00563 EAL domain CJD35_RS21275 PF03707 Bacterial signalling protein N terminal repeat CJD35_RS21285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CJD35_RS21285 PF03466 LysR substrate binding domain CJD35_RS21300 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CJD35_RS21310 PF00106 short chain dehydrogenase CJD35_RS21320 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS21320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CJD35_RS21325 PF01965 DJ-1/PfpI family CJD35_RS21330 PF17755 UvrA DNA-binding domain CJD35_RS21335 PF00872 Transposase, Mutator family CJD35_RS21340 PF08240 Alcohol dehydrogenase GroES-like domain CJD35_RS21340 PF00107 Zinc-binding dehydrogenase CJD35_RS21345 PF02583 Metal-sensitive transcriptional repressor CJD35_RS21355 PF00440 Bacterial regulatory proteins, tetR family CJD35_RS21410 PF01556 DnaJ C terminal domain CJD35_RS21410 PF00226 DnaJ domain CJD35_RS21420 PF00108 Thiolase, N-terminal domain CJD35_RS21420 PF02803 Thiolase, C-terminal domain CJD35_RS21435 PF00106 short chain dehydrogenase CJD35_RS21440 PF00111 2Fe-2S iron-sulfur cluster binding domain CJD35_RS21440 PF01799 [2Fe-2S] binding domain CJD35_RS21440 PF10518 TAT (twin-arginine translocation) pathway signal sequence CJD35_RS21445 PF00941 FAD binding domain in molybdopterin dehydrogenase CJD35_RS21445 PF03450 CO dehydrogenase flavoprotein C-terminal domain CJD35_RS21450 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CJD35_RS21450 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CJD35_RS21470 PF00486 Transcriptional regulatory protein, C terminal CJD35_RS21470 PF00072 Response regulator receiver domain CJD35_RS21480 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CJD35_RS21480 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CJD35_RS21490 PF03449 Transcription elongation factor, N-terminal CJD35_RS21490 PF01272 Transcription elongation factor, GreA/GreB, C-term CJD35_RS21500 PF00313 'Cold-shock' DNA-binding domain CJD35_RS21545 PF00266 Aminotransferase class-V CJD35_RS21565 PF01526 Tn3 transposase DDE domain CJD35_RS21565 PF13700 Domain of unknown function (DUF4158) CJD35_RS21580 PF04542 Sigma-70 region 2 CJD35_RS21580 PF08281 Sigma-70, region 4 CJD35_RS21585 PF13801 Heavy-metal resistance CJD35_RS21600 PF05425 Copper resistance protein D CJD35_RS21610 PF03960 ArsC family CJD35_RS21615 PF02040 Arsenical pump membrane protein CJD35_RS21635 PF00717 Peptidase S24-like CJD35_RS21640 PF13438 Domain of unknown function (DUF4113) CJD35_RS21640 PF00817 impB/mucB/samB family CJD35_RS21640 PF11799 impB/mucB/samB family C-terminal domain CJD35_RS21640 PF11798 IMS family HHH motif CJD35_RS21645 PF01526 Tn3 transposase DDE domain CJD35_RS21645 PF13700 Domain of unknown function (DUF4158) CJD35_RS21650 PF02796 Helix-turn-helix domain of resolvase CJD35_RS21650 PF00239 Resolvase, N terminal domain CJD35_RS21655 PF00817 impB/mucB/samB family CJD35_RS21655 PF11799 impB/mucB/samB family C-terminal domain CJD35_RS21670 PF00872 Transposase, Mutator family CJD35_RS21705 PF09278 MerR, DNA binding CJD35_RS21705 PF00376 MerR family regulatory protein CJD35_RS21720 PF02321 Outer membrane efflux protein CJD35_RS21745 PF02049 Flagellar hook-basal body complex protein FliE CJD35_RS21750 PF01062 Bestrophin, RFP-TM, chloride channel CJD35_RS21780 PF02308 MgtC family CJD35_RS21790 PF09335 SNARE associated Golgi protein CJD35_RS21805 PF08401 Domain of unknown function (DUF1738) CJD35_RS21805 PF18818 Metallopeptidase superfamily domain CJD35_RS21860 PF01464 Transglycosylase SLT domain CJD35_RS21870 PF05101 Type IV secretory pathway, VirB3-like protein CJD35_RS21875 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CJD35_RS21895 PF04335 VirB8 protein CJD35_RS21900 PF03524 Conjugal transfer protein CJD35_RS21905 PF03743 Bacterial conjugation TrbI-like protein CJD35_RS21910 PF00437 Type II/IV secretion system protein CJD35_RS21915 PF02534 Type IV secretory system Conjugative DNA transfer CJD35_RS21945 PF17762 HTH domain found in ParB protein CJD35_RS21945 PF02195 ParB-like nuclease domain CJD35_RS21975 PF00239 Resolvase, N terminal domain CJD35_RS21975 PF02796 Helix-turn-helix domain of resolvase CJD35_RS21980 PF09278 MerR, DNA binding CJD35_RS21980 PF00376 MerR family regulatory protein CJD35_RS22020 PF05275 Copper resistance protein B precursor (CopB) CJD35_RS22025 PF07732 Multicopper oxidase CJD35_RS22025 PF00394 Multicopper oxidase CJD35_RS22025 PF07731 Multicopper oxidase CJD35_RS22030 PF00106 short chain dehydrogenase CJD35_RS22035 PF00239 Resolvase, N terminal domain CJD35_RS22035 PF02796 Helix-turn-helix domain of resolvase CJD35_RS22045 PF05045 Rhamnan synthesis protein F CJD35_RS22045 PF14307 Glycosyltransferase WbsX CJD35_RS22105 PF14307 Glycosyltransferase WbsX CJD35_RS22105 PF05045 Rhamnan synthesis protein F CJD35_RS22120 PF16363 GDP-mannose 4,6 dehydratase CJD35_RS22150 PF02563 Polysaccharide biosynthesis/export protein CJD35_RS22155 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CJD35_RS22160 PF16363 GDP-mannose 4,6 dehydratase CJD35_RS22165 PF04321 RmlD substrate binding domain CJD35_RS22170 PF00483 Nucleotidyl transferase CJD35_RS22190 PF02899 Phage integrase, N-terminal SAM-like domain CJD35_RS22190 PF00589 Phage integrase family CJD35_RS22195 PF08241 Methyltransferase domain CJD35_RS22215 PF02796 Helix-turn-helix domain of resolvase CJD35_RS22215 PF00239 Resolvase, N terminal domain CJD35_RS22220 PF13700 Domain of unknown function (DUF4158) CJD35_RS22220 PF01526 Tn3 transposase DDE domain CJD35_RS22240 PF13700 Domain of unknown function (DUF4158) CJD35_RS22240 PF01526 Tn3 transposase DDE domain CJD35_RS22245 PF00239 Resolvase, N terminal domain CJD35_RS22245 PF02796 Helix-turn-helix domain of resolvase CJD35_RS22250 PF01050 Mannose-6-phosphate isomerase CJD35_RS22250 PF00483 Nucleotidyl transferase CJD35_RS22255 PF10134 Replication initiator protein A CJD35_RS22275 PF07015 VirC1 protein CJD35_RS22280 PF00535 Glycosyl transferase family 2 CJD35_RS22305 PF01061 ABC-2 type transporter CJD35_RS22310 PF00005 ABC transporter