CJD35_RS15140 0b1f95f7a383a63d121f677d3783ca2c 209 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS15140 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:1.10.10.60 147 198 4.9E-8 T 28-03-2018 CJD35_RS15140 0b1f95f7a383a63d121f677d3783ca2c 209 SMART SM00857 5 148 9.2E-48 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS15140 0b1f95f7a383a63d121f677d3783ca2c 209 Pfam PF00239 Resolvase, N terminal domain 5 148 6.2E-39 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS15140 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:1.20.5.40 117 146 2.5E-16 T 28-03-2018 CJD35_RS15140 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:3.40.50.1390 3 116 9.4E-32 T 28-03-2018 CJD35_RS15140 0b1f95f7a383a63d121f677d3783ca2c 209 SUPERFAMILY SSF53041 4 148 1.44E-36 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS22215 0b1f95f7a383a63d121f677d3783ca2c 209 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS22215 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:1.10.10.60 147 198 4.9E-8 T 28-03-2018 CJD35_RS22215 0b1f95f7a383a63d121f677d3783ca2c 209 SMART SM00857 5 148 9.2E-48 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS22215 0b1f95f7a383a63d121f677d3783ca2c 209 Pfam PF00239 Resolvase, N terminal domain 5 148 6.2E-39 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS22215 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:1.20.5.40 117 146 2.5E-16 T 28-03-2018 CJD35_RS22215 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:3.40.50.1390 3 116 9.4E-32 T 28-03-2018 CJD35_RS22215 0b1f95f7a383a63d121f677d3783ca2c 209 SUPERFAMILY SSF53041 4 148 1.44E-36 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20945 0b1f95f7a383a63d121f677d3783ca2c 209 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS20945 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:1.10.10.60 147 198 4.9E-8 T 28-03-2018 CJD35_RS20945 0b1f95f7a383a63d121f677d3783ca2c 209 SMART SM00857 5 148 9.2E-48 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20945 0b1f95f7a383a63d121f677d3783ca2c 209 Pfam PF00239 Resolvase, N terminal domain 5 148 6.2E-39 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20945 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:1.20.5.40 117 146 2.5E-16 T 28-03-2018 CJD35_RS20945 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:3.40.50.1390 3 116 9.4E-32 T 28-03-2018 CJD35_RS20945 0b1f95f7a383a63d121f677d3783ca2c 209 SUPERFAMILY SSF53041 4 148 1.44E-36 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20505 0b1f95f7a383a63d121f677d3783ca2c 209 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS20505 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:1.10.10.60 147 198 4.9E-8 T 28-03-2018 CJD35_RS20505 0b1f95f7a383a63d121f677d3783ca2c 209 SMART SM00857 5 148 9.2E-48 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20505 0b1f95f7a383a63d121f677d3783ca2c 209 Pfam PF00239 Resolvase, N terminal domain 5 148 6.2E-39 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20505 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:1.20.5.40 117 146 2.5E-16 T 28-03-2018 CJD35_RS20505 0b1f95f7a383a63d121f677d3783ca2c 209 Gene3D G3DSA:3.40.50.1390 3 116 9.4E-32 T 28-03-2018 CJD35_RS20505 0b1f95f7a383a63d121f677d3783ca2c 209 SUPERFAMILY SSF53041 4 148 1.44E-36 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS10170 db39026b129390e95563f8dfd594c545 168 Pfam PF10722 Putative bacterial sensory transduction regulator 16 145 3.1E-29 T 28-03-2018 IPR019660 Putative sensory transduction regulator YbjN CJD35_RS12985 619912ed552e64526a5b133ab2533722 529 Pfam PF00083 Sugar (and other) transporter 21 232 4.0E-29 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CJD35_RS12985 619912ed552e64526a5b133ab2533722 529 Gene3D G3DSA:1.20.1250.20 12 226 9.3E-25 T 28-03-2018 CJD35_RS12985 619912ed552e64526a5b133ab2533722 529 Gene3D G3DSA:1.20.1250.20 227 529 1.2E-30 T 28-03-2018 CJD35_RS12985 619912ed552e64526a5b133ab2533722 529 SUPERFAMILY SSF103473 432 527 1.03E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS12985 619912ed552e64526a5b133ab2533722 529 SUPERFAMILY SSF103473 11 340 1.03E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 274 393 3.8E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 SMART SM00388 164 232 7.6E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 SUPERFAMILY SSF55874 223 398 8.64E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 SUPERFAMILY SSF52172 417 534 2.7E-26 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 SMART SM00387 273 395 4.6E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 355 373 1.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 338 1.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 342 352 1.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 392 1.1E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 Gene3D G3DSA:3.40.50.2300 407 541 9.0E-25 T 28-03-2018 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 SMART SM00448 416 529 8.3E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 Pfam PF08448 PAS fold 37 125 4.5E-6 T 28-03-2018 IPR013656 PAS fold-4 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 Gene3D G3DSA:3.30.450.20 2 138 1.5E-17 T 28-03-2018 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 Pfam PF00512 His Kinase A (phospho-acceptor) domain 165 230 1.0E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 Gene3D G3DSA:3.30.565.10 230 395 2.6E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 SUPERFAMILY SSF47384 153 229 1.96E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 SUPERFAMILY SSF55785 6 122 7.96E-9 T 28-03-2018 IPR000014 PAS domain CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 Pfam PF00072 Response regulator receiver domain 418 529 1.2E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS10550 2e7d30e6c720fc8ddba3a52c9f11094f 541 Gene3D G3DSA:1.10.287.130 146 228 8.2E-7 T 28-03-2018 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF13185 GAF domain 241 374 3.1E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF52172 1014 1141 4.84E-38 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:1.20.120.330 383 475 8.8E-5 T 28-03-2018 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF55874 530 700 6.42E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:3.40.50.2300 867 1009 9.9E-21 T 28-03-2018 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:3.40.50.2300 1010 1142 1.7E-39 T 28-03-2018 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF00072 Response regulator receiver domain 1019 1136 1.2E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF00072 Response regulator receiver domain 752 859 1.9E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF00072 Response regulator receiver domain 873 981 4.4E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:3.40.50.2300 745 866 1.7E-24 T 28-03-2018 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF00512 His Kinase A (phospho-acceptor) domain 474 541 1.9E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00065 242 384 2.0E-5 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 589 699 2.6E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00448 871 985 4.3E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00448 749 859 1.1E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00448 1017 1136 1.0E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF52172 751 864 4.41E-25 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00387 588 700 1.0E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF05227 CHASE3 domain 47 180 9.0E-46 T 28-03-2018 IPR007891 CHASE3 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:3.30.565.10 545 708 1.0E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF55781 233 402 2.6E-16 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00388 473 541 4.0E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:1.10.287.130 476 537 2.4E-18 T 28-03-2018 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:3.30.450.40 214 382 9.2E-16 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF52172 869 993 1.71E-21 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF47384 462 542 1.63E-21 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 639 9.5E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 678 9.5E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 653 9.5E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS20730 3d94c668f4eaa124c0ec19bfbce49188 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 697 9.5E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF13185 GAF domain 241 374 3.1E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF52172 1014 1141 4.84E-38 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:1.20.120.330 383 475 8.8E-5 T 28-03-2018 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF55874 530 700 6.42E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:3.40.50.2300 867 1009 9.9E-21 T 28-03-2018 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:3.40.50.2300 1010 1142 1.7E-39 T 28-03-2018 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF00072 Response regulator receiver domain 1019 1136 1.2E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF00072 Response regulator receiver domain 752 859 1.9E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF00072 Response regulator receiver domain 873 981 4.4E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:3.40.50.2300 745 866 1.7E-24 T 28-03-2018 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF00512 His Kinase A (phospho-acceptor) domain 474 541 1.9E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00065 242 384 2.0E-5 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 589 699 2.6E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00448 871 985 4.3E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00448 749 859 1.1E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00448 1017 1136 1.0E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF52172 751 864 4.41E-25 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00387 588 700 1.0E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Pfam PF05227 CHASE3 domain 47 180 9.0E-46 T 28-03-2018 IPR007891 CHASE3 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:3.30.565.10 545 708 1.0E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF55781 233 402 2.6E-16 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SMART SM00388 473 541 4.0E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:1.10.287.130 476 537 2.4E-18 T 28-03-2018 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 Gene3D G3DSA:3.30.450.40 214 382 9.2E-16 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF52172 869 993 1.71E-21 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 SUPERFAMILY SSF47384 462 542 1.63E-21 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 639 9.5E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 678 9.5E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 653 9.5E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18500 3d94c668f4eaa124c0ec19bfbce49188 1142 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 697 9.5E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 SMART SM00382 87 242 1.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 Hamap MF_01498 DNA repair protein RadA [radA]. 21 452 42.111 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 Pfam PF13481 AAA domain 82 220 3.3E-15 T 28-03-2018 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 Gene3D G3DSA:3.40.50.300 58 247 8.7E-20 T 28-03-2018 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 SUPERFAMILY SSF52540 58 269 2.34E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 438 3.4E-161 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 SUPERFAMILY SSF54211 301 450 6.83E-33 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 SUPERFAMILY SSF54211 253 267 6.83E-33 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 Gene3D G3DSA:3.30.230.10 248 454 4.3E-36 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 PRINTS PR01874 DNA repair protein radA signature 172 196 3.1E-88 T 28-03-2018 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 PRINTS PR01874 DNA repair protein radA signature 211 239 3.1E-88 T 28-03-2018 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 PRINTS PR01874 DNA repair protein radA signature 246 272 3.1E-88 T 28-03-2018 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 PRINTS PR01874 DNA repair protein radA signature 79 107 3.1E-88 T 28-03-2018 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 PRINTS PR01874 DNA repair protein radA signature 10 34 3.1E-88 T 28-03-2018 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 PRINTS PR01874 DNA repair protein radA signature 321 344 3.1E-88 T 28-03-2018 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 PRINTS PR01874 DNA repair protein radA signature 121 138 3.1E-88 T 28-03-2018 CJD35_RS10610 5e99f9760e591408cdefe791933b7d90 455 Pfam PF13541 Subunit ChlI of Mg-chelatase 340 428 4.3E-7 T 28-03-2018 CJD35_RS05050 a991007b99b472a5c61c770267787957 503 SUPERFAMILY SSF53098 127 302 1.65E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS05050 a991007b99b472a5c61c770267787957 503 Pfam PF00665 Integrase core domain 128 252 5.7E-18 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS05050 a991007b99b472a5c61c770267787957 503 Gene3D G3DSA:3.30.420.10 127 352 3.6E-19 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS05050 a991007b99b472a5c61c770267787957 503 Gene3D G3DSA:1.10.10.60 2 43 1.2E-4 T 28-03-2018 CJD35_RS05020 a991007b99b472a5c61c770267787957 503 SUPERFAMILY SSF53098 127 302 1.65E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS05020 a991007b99b472a5c61c770267787957 503 Pfam PF00665 Integrase core domain 128 252 5.7E-18 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS05020 a991007b99b472a5c61c770267787957 503 Gene3D G3DSA:3.30.420.10 127 352 3.6E-19 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS05020 a991007b99b472a5c61c770267787957 503 Gene3D G3DSA:1.10.10.60 2 43 1.2E-4 T 28-03-2018 CJD35_RS19900 99533f9c2c383e9a64997d6fa0a003a7 303 Gene3D G3DSA:3.40.190.10 92 179 2.1E-14 T 28-03-2018 CJD35_RS19900 99533f9c2c383e9a64997d6fa0a003a7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 4.2E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS19900 99533f9c2c383e9a64997d6fa0a003a7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 4.2E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS19900 99533f9c2c383e9a64997d6fa0a003a7 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 4.2E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS19900 99533f9c2c383e9a64997d6fa0a003a7 303 Pfam PF03466 LysR substrate binding domain 93 277 2.8E-25 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS19900 99533f9c2c383e9a64997d6fa0a003a7 303 SUPERFAMILY SSF53850 91 274 1.99E-25 T 28-03-2018 CJD35_RS19900 99533f9c2c383e9a64997d6fa0a003a7 303 Gene3D G3DSA:1.10.10.10 1 86 3.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19900 99533f9c2c383e9a64997d6fa0a003a7 303 Gene3D G3DSA:3.40.190.10 180 263 6.9E-6 T 28-03-2018 CJD35_RS19900 99533f9c2c383e9a64997d6fa0a003a7 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 5.6E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS19900 99533f9c2c383e9a64997d6fa0a003a7 303 SUPERFAMILY SSF46785 1 83 2.14E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS08145 109b46945636977241e7b4aa1f915152 268 SUPERFAMILY SSF53448 4 258 1.15E-37 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS08145 109b46945636977241e7b4aa1f915152 268 Gene3D G3DSA:3.90.550.10 1 264 4.9E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS08145 109b46945636977241e7b4aa1f915152 268 Pfam PF02348 Cytidylyltransferase 5 226 2.1E-27 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CJD35_RS09075 34e96e2e95902230548cd4bde2e04598 255 Gene3D G3DSA:3.40.190.10 29 118 1.7E-11 T 28-03-2018 CJD35_RS09075 34e96e2e95902230548cd4bde2e04598 255 Gene3D G3DSA:3.40.190.10 119 216 1.3E-30 T 28-03-2018 CJD35_RS09075 34e96e2e95902230548cd4bde2e04598 255 SUPERFAMILY SSF53850 30 255 4.02E-61 T 28-03-2018 CJD35_RS09075 34e96e2e95902230548cd4bde2e04598 255 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 33 251 7.8E-54 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CJD35_RS09075 34e96e2e95902230548cd4bde2e04598 255 Pfam PF13531 Bacterial extracellular solute-binding protein 30 252 3.6E-45 T 28-03-2018 CJD35_RS09075 34e96e2e95902230548cd4bde2e04598 255 PIRSF PIRSF004846 1 255 3.4E-59 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CJD35_RS06390 6eaff82e5fd758f2b472508243471cdd 267 Gene3D G3DSA:3.90.226.10 7 220 2.3E-72 T 28-03-2018 CJD35_RS06390 6eaff82e5fd758f2b472508243471cdd 267 Gene3D G3DSA:1.10.12.10 221 264 1.9E-15 T 28-03-2018 IPR014748 Crontonase, C-terminal CJD35_RS06390 6eaff82e5fd758f2b472508243471cdd 267 SUPERFAMILY SSF52096 2 261 1.06E-90 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS06390 6eaff82e5fd758f2b472508243471cdd 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 261 4.1E-67 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS06390 6eaff82e5fd758f2b472508243471cdd 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 104 124 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CJD35_RS01460 1991022c4d8d299bb408f5e5aa52a5ab 182 ProSitePatterns PS01128 Shikimate kinase signature. 70 95 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CJD35_RS01460 1991022c4d8d299bb408f5e5aa52a5ab 182 Gene3D G3DSA:3.40.50.300 3 181 1.3E-27 T 28-03-2018 CJD35_RS01460 1991022c4d8d299bb408f5e5aa52a5ab 182 SUPERFAMILY SSF52540 17 177 2.35E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01460 1991022c4d8d299bb408f5e5aa52a5ab 182 Hamap MF_00109 Shikimate kinase [aroK]. 14 179 26.363 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CJD35_RS01460 1991022c4d8d299bb408f5e5aa52a5ab 182 PRINTS PR01100 Shikimate kinase family signature 108 125 8.7E-23 T 28-03-2018 CJD35_RS01460 1991022c4d8d299bb408f5e5aa52a5ab 182 PRINTS PR01100 Shikimate kinase family signature 41 54 8.7E-23 T 28-03-2018 CJD35_RS01460 1991022c4d8d299bb408f5e5aa52a5ab 182 PRINTS PR01100 Shikimate kinase family signature 87 96 8.7E-23 T 28-03-2018 CJD35_RS01460 1991022c4d8d299bb408f5e5aa52a5ab 182 PRINTS PR01100 Shikimate kinase family signature 17 32 8.7E-23 T 28-03-2018 CJD35_RS01460 1991022c4d8d299bb408f5e5aa52a5ab 182 PRINTS PR01100 Shikimate kinase family signature 69 77 8.7E-23 T 28-03-2018 CJD35_RS01460 1991022c4d8d299bb408f5e5aa52a5ab 182 Pfam PF01202 Shikimate kinase 23 177 1.2E-44 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CJD35_RS09945 567d6add231820ca5198988d9c81511c 257 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 255 2.7E-71 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CJD35_RS09945 567d6add231820ca5198988d9c81511c 257 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 255 1.6E-72 T 28-03-2018 CJD35_RS09945 567d6add231820ca5198988d9c81511c 257 SUPERFAMILY SSF56219 1 256 1.2E-79 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS09945 567d6add231820ca5198988d9c81511c 257 Gene3D G3DSA:3.60.10.10 1 256 2.2E-51 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS09945 567d6add231820ca5198988d9c81511c 257 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 248 4.4E-16 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS14650 11efc498a9c8587b3bc96cad62ca4c4c 822 Gene3D G3DSA:3.40.50.2000 14 489 2.8E-184 T 28-03-2018 CJD35_RS14650 11efc498a9c8587b3bc96cad62ca4c4c 822 Pfam PF00343 Carbohydrate phosphorylase 108 820 0.0 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CJD35_RS14650 11efc498a9c8587b3bc96cad62ca4c4c 822 SUPERFAMILY SSF53756 17 821 0.0 T 28-03-2018 CJD35_RS14650 11efc498a9c8587b3bc96cad62ca4c4c 822 PIRSF PIRSF000460 9 822 3.1E-225 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CJD35_RS14650 11efc498a9c8587b3bc96cad62ca4c4c 822 Gene3D G3DSA:3.40.50.2000 490 805 2.9E-127 T 28-03-2018 CJD35_RS14650 11efc498a9c8587b3bc96cad62ca4c4c 822 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 20 820 0.0 T 28-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CJD35_RS06185 65aa72e9e84727f0b3520fe997b7cfca 180 Pfam PF00581 Rhodanese-like domain 59 163 3.1E-5 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS06185 65aa72e9e84727f0b3520fe997b7cfca 180 Gene3D G3DSA:3.40.250.10 24 176 2.8E-14 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS06185 65aa72e9e84727f0b3520fe997b7cfca 180 TIGRFAM TIGR03865 PQQ_CXXCW: PQQ-dependent catabolism-associated CXXCW motif protein 10 174 4.7E-46 T 28-03-2018 IPR022376 PQQ-dependent catabolism-associated CXXCW motif CJD35_RS06185 65aa72e9e84727f0b3520fe997b7cfca 180 SUPERFAMILY SSF52821 47 172 8.64E-17 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS12000 e3f0dbf1db47c95d75548b221ca7fd2c 377 SUPERFAMILY SSF53756 8 367 5.23E-56 T 28-03-2018 CJD35_RS12000 e3f0dbf1db47c95d75548b221ca7fd2c 377 Gene3D G3DSA:3.40.50.2000 185 353 1.5E-33 T 28-03-2018 CJD35_RS12000 e3f0dbf1db47c95d75548b221ca7fd2c 377 Pfam PF13439 Glycosyltransferase Family 4 48 181 1.8E-7 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS12000 e3f0dbf1db47c95d75548b221ca7fd2c 377 Gene3D G3DSA:3.40.50.2000 1 184 5.2E-6 T 28-03-2018 CJD35_RS12000 e3f0dbf1db47c95d75548b221ca7fd2c 377 Pfam PF00534 Glycosyl transferases group 1 198 347 1.6E-24 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS09760 aea6ae8c969c39d521780902de5c0e85 515 Gene3D G3DSA:2.40.10.10 130 238 2.2E-17 T 28-03-2018 CJD35_RS09760 aea6ae8c969c39d521780902de5c0e85 515 Gene3D G3DSA:2.40.10.10 19 129 1.4E-13 T 28-03-2018 CJD35_RS09760 aea6ae8c969c39d521780902de5c0e85 515 PRINTS PR00834 HtrA/DegQ protease family signature 61 73 7.9E-8 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS09760 aea6ae8c969c39d521780902de5c0e85 515 PRINTS PR00834 HtrA/DegQ protease family signature 194 211 7.9E-8 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS09760 aea6ae8c969c39d521780902de5c0e85 515 PRINTS PR00834 HtrA/DegQ protease family signature 172 189 7.9E-8 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS09760 aea6ae8c969c39d521780902de5c0e85 515 PRINTS PR00834 HtrA/DegQ protease family signature 88 108 7.9E-8 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS09760 aea6ae8c969c39d521780902de5c0e85 515 PRINTS PR00834 HtrA/DegQ protease family signature 127 151 7.9E-8 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS09760 aea6ae8c969c39d521780902de5c0e85 515 SUPERFAMILY SSF50494 29 230 1.94E-31 T 28-03-2018 IPR009003 Peptidase S1, PA clan CJD35_RS09760 aea6ae8c969c39d521780902de5c0e85 515 Pfam PF13365 Trypsin-like peptidase domain 53 201 3.1E-18 T 28-03-2018 CJD35_RS00815 e423c1864116fd10ec196730d216b108 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 1.6E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS00815 e423c1864116fd10ec196730d216b108 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 57 72 1.6E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS00815 e423c1864116fd10ec196730d216b108 292 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 1.6E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS00815 e423c1864116fd10ec196730d216b108 292 Gene3D G3DSA:3.40.50.1820 4 292 9.6E-51 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS00815 e423c1864116fd10ec196730d216b108 292 Pfam PF00561 alpha/beta hydrolase fold 32 279 1.4E-23 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS00815 e423c1864116fd10ec196730d216b108 292 SUPERFAMILY SSF53474 8 292 3.3E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS00815 e423c1864116fd10ec196730d216b108 292 PRINTS PR00412 Epoxide hydrolase signature 116 129 8.9E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS00815 e423c1864116fd10ec196730d216b108 292 PRINTS PR00412 Epoxide hydrolase signature 57 72 8.9E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS00815 e423c1864116fd10ec196730d216b108 292 PRINTS PR00412 Epoxide hydrolase signature 102 115 8.9E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS00815 e423c1864116fd10ec196730d216b108 292 PRINTS PR00412 Epoxide hydrolase signature 269 291 8.9E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS15200 00353536ef7bddf457ff0e6f1dc27f0c 247 SUPERFAMILY SSF56645 19 95 1.98E-7 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS15200 00353536ef7bddf457ff0e6f1dc27f0c 247 Gene3D G3DSA:2.40.110.10 6 87 1.2E-7 T 28-03-2018 CJD35_RS15200 00353536ef7bddf457ff0e6f1dc27f0c 247 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 110 223 2.6E-7 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS15200 00353536ef7bddf457ff0e6f1dc27f0c 247 SUPERFAMILY SSF47203 105 224 4.95E-7 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS15200 00353536ef7bddf457ff0e6f1dc27f0c 247 Gene3D G3DSA:1.20.140.10 88 239 1.8E-9 T 28-03-2018 CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 70 81 1.1E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.1E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.1E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.1E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.1E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 Pfam PF00106 short chain dehydrogenase 6 195 2.3E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 Gene3D G3DSA:3.40.50.720 1 248 2.2E-54 T 28-03-2018 CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 SUPERFAMILY SSF51735 5 243 6.85E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.0E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 70 81 8.0E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16325 ea8fca3a0dc0fc90a7e1f28a9247eb6a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.0E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 Pfam PF00675 Insulinase (Peptidase family M16) 62 190 1.9E-13 T 28-03-2018 IPR011765 Peptidase M16, N-terminal CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 Pfam PF00675 Insulinase (Peptidase family M16) 543 665 3.9E-14 T 28-03-2018 IPR011765 Peptidase M16, N-terminal CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 Gene3D G3DSA:3.30.830.10 524 744 1.4E-43 T 28-03-2018 CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 Gene3D G3DSA:3.30.830.10 750 949 5.6E-25 T 28-03-2018 CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 Gene3D G3DSA:3.30.830.10 275 474 2.4E-18 T 28-03-2018 CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 SUPERFAMILY SSF63411 523 740 1.18E-45 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 Pfam PF05193 Peptidase M16 inactive domain 692 870 1.1E-25 T 28-03-2018 IPR007863 Peptidase M16, C-terminal CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 Pfam PF05193 Peptidase M16 inactive domain 220 393 1.2E-20 T 28-03-2018 IPR007863 Peptidase M16, C-terminal CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 Gene3D G3DSA:3.30.830.10 45 268 1.5E-53 T 28-03-2018 CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 SUPERFAMILY SSF63411 50 258 1.62E-50 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 SUPERFAMILY SSF63411 277 463 7.86E-20 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJD35_RS04750 b15b969156864719cd0ba7a9cfced29c 960 SUPERFAMILY SSF63411 755 955 9.33E-31 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJD35_RS17490 5eab5f596e946f0881680a420da32ade 360 Pfam PF05598 Transposase domain (DUF772) 53 126 1.1E-24 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CJD35_RS17490 5eab5f596e946f0881680a420da32ade 360 Pfam PF01609 Transposase DDE domain 141 347 2.0E-14 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS10065 5eab5f596e946f0881680a420da32ade 360 Pfam PF05598 Transposase domain (DUF772) 53 126 1.1E-24 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CJD35_RS10065 5eab5f596e946f0881680a420da32ade 360 Pfam PF01609 Transposase DDE domain 141 347 2.0E-14 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS08710 5eab5f596e946f0881680a420da32ade 360 Pfam PF05598 Transposase domain (DUF772) 53 126 1.1E-24 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CJD35_RS08710 5eab5f596e946f0881680a420da32ade 360 Pfam PF01609 Transposase DDE domain 141 347 2.0E-14 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS08690 5eab5f596e946f0881680a420da32ade 360 Pfam PF05598 Transposase domain (DUF772) 53 126 1.1E-24 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CJD35_RS08690 5eab5f596e946f0881680a420da32ade 360 Pfam PF01609 Transposase DDE domain 141 347 2.0E-14 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS05260 5eab5f596e946f0881680a420da32ade 360 Pfam PF05598 Transposase domain (DUF772) 53 126 1.1E-24 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CJD35_RS05260 5eab5f596e946f0881680a420da32ade 360 Pfam PF01609 Transposase DDE domain 141 347 2.0E-14 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS10785 5eab5f596e946f0881680a420da32ade 360 Pfam PF05598 Transposase domain (DUF772) 53 126 1.1E-24 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CJD35_RS10785 5eab5f596e946f0881680a420da32ade 360 Pfam PF01609 Transposase DDE domain 141 347 2.0E-14 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS16900 5eab5f596e946f0881680a420da32ade 360 Pfam PF05598 Transposase domain (DUF772) 53 126 1.1E-24 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CJD35_RS16900 5eab5f596e946f0881680a420da32ade 360 Pfam PF01609 Transposase DDE domain 141 347 2.0E-14 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS01385 5eab5f596e946f0881680a420da32ade 360 Pfam PF05598 Transposase domain (DUF772) 53 126 1.1E-24 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CJD35_RS01385 5eab5f596e946f0881680a420da32ade 360 Pfam PF01609 Transposase DDE domain 141 347 2.0E-14 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS18685 de8412fd80cbe6d0ec358fbbe4062bb9 139 Pfam PF03061 Thioesterase superfamily 21 102 1.1E-12 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CJD35_RS18685 de8412fd80cbe6d0ec358fbbe4062bb9 139 SUPERFAMILY SSF54637 6 130 1.11E-32 T 28-03-2018 IPR029069 HotDog domain CJD35_RS18685 de8412fd80cbe6d0ec358fbbe4062bb9 139 Gene3D G3DSA:3.10.129.10 5 133 6.3E-27 T 28-03-2018 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 SUPERFAMILY SSF51905 4 64 3.84E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 SUPERFAMILY SSF51905 95 258 3.84E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 Pfam PF01134 Glucose inhibited division protein A 6 395 3.2E-147 T 28-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 Gene3D G3DSA:3.50.50.60 3 261 4.9E-64 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 616 38.167 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 6.4E-6 T 28-03-2018 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.4E-6 T 28-03-2018 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 SMART SM01228 538 609 3.2E-34 T 28-03-2018 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 Gene3D G3DSA:3.50.50.60 313 403 0.12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 612 8.0E-216 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CJD35_RS05860 71d2154c8e478ff63b15cae84ef70f71 616 Pfam PF13932 GidA associated domain 398 607 6.2E-60 T 28-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CJD35_RS20570 d317bfcc88a2168478204883a6bc5e4f 186 Pfam PF00239 Resolvase, N terminal domain 6 139 1.4E-36 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20570 d317bfcc88a2168478204883a6bc5e4f 186 Pfam PF02796 Helix-turn-helix domain of resolvase 141 184 1.3E-9 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20570 d317bfcc88a2168478204883a6bc5e4f 186 Gene3D G3DSA:1.20.5.40 108 126 3.4E-18 T 28-03-2018 CJD35_RS20570 d317bfcc88a2168478204883a6bc5e4f 186 SUPERFAMILY SSF53041 6 139 1.31E-39 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20570 d317bfcc88a2168478204883a6bc5e4f 186 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS20570 d317bfcc88a2168478204883a6bc5e4f 186 SUPERFAMILY SSF46689 141 184 8.96E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS20570 d317bfcc88a2168478204883a6bc5e4f 186 Gene3D G3DSA:3.40.50.1390 4 107 6.9E-31 T 28-03-2018 CJD35_RS20570 d317bfcc88a2168478204883a6bc5e4f 186 SMART SM00857 5 139 4.4E-45 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20570 d317bfcc88a2168478204883a6bc5e4f 186 Gene3D G3DSA:1.10.10.60 127 185 1.5E-11 T 28-03-2018 CJD35_RS20570 d317bfcc88a2168478204883a6bc5e4f 186 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 PIRSF PIRSF000124 7 425 1.3E-74 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 8 411 2.6E-118 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 295 5.0E-27 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 Gene3D G3DSA:3.40.50.720 2 207 1.1E-42 T 28-03-2018 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 SUPERFAMILY SSF48179 208 300 2.21E-28 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 SUPERFAMILY SSF52413 307 416 2.09E-23 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 SUPERFAMILY SSF51735 8 200 1.32E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 PIRSF PIRSF500136 2 425 1.3E-141 T 28-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 Gene3D G3DSA:3.40.50.720 232 422 3.9E-54 T 28-03-2018 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 414 6.9E-19 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 SMART SM00984 318 416 2.6E-22 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 8 190 7.9E-53 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CJD35_RS13905 1ebff8c0610cbd92bf683194e5bafb75 431 Gene3D G3DSA:1.20.5.170 208 231 6.6E-14 T 28-03-2018 CJD35_RS00885 4cc25424ce620f8e3925dd1cee152951 149 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 15 143 2.3E-45 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 CJD35_RS00885 4cc25424ce620f8e3925dd1cee152951 149 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 145 29.516 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 CJD35_RS13900 b18893885735d2e45809b560729756d0 231 Gene3D G3DSA:3.10.560.10 112 202 1.8E-19 T 28-03-2018 CJD35_RS13900 b18893885735d2e45809b560729756d0 231 Pfam PF10531 SLBB domain 124 172 3.3E-9 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS13900 b18893885735d2e45809b560729756d0 231 Pfam PF02563 Polysaccharide biosynthesis/export protein 43 116 7.0E-20 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CJD35_RS13900 b18893885735d2e45809b560729756d0 231 Gene3D G3DSA:3.30.1950.10 50 111 9.2E-14 T 28-03-2018 CJD35_RS10760 5a54e7c5c4813b2290e0a3ed398872c6 159 SUPERFAMILY SSF46785 18 145 6.34E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10760 5a54e7c5c4813b2290e0a3ed398872c6 159 SMART SM00347 34 134 7.4E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS10760 5a54e7c5c4813b2290e0a3ed398872c6 159 Gene3D G3DSA:1.10.10.10 16 150 8.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10760 5a54e7c5c4813b2290e0a3ed398872c6 159 Pfam PF12802 MarR family 40 98 6.6E-16 T 28-03-2018 CJD35_RS10760 5a54e7c5c4813b2290e0a3ed398872c6 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 94 110 2.2E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS10760 5a54e7c5c4813b2290e0a3ed398872c6 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 58 74 2.2E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS10760 5a54e7c5c4813b2290e0a3ed398872c6 159 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 90 2.2E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS10760 5a54e7c5c4813b2290e0a3ed398872c6 159 ProSitePatterns PS01117 MarR-type HTH domain signature. 73 107 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 SUPERFAMILY SSF47384 428 498 2.55E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 Pfam PF00512 His Kinase A (phospho-acceptor) domain 436 498 3.9E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 648 661 3.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 593 607 3.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 624 642 3.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 621 3.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 662 7.9E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 SUPERFAMILY SSF52172 688 804 2.99E-30 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 SUPERFAMILY SSF55785 311 401 4.36E-7 T 28-03-2018 IPR000014 PAS domain CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 Pfam PF00072 Response regulator receiver domain 689 798 5.1E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 Gene3D G3DSA:3.30.450.20 306 428 2.3E-10 T 28-03-2018 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 SUPERFAMILY SSF55874 490 664 3.8E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 Gene3D G3DSA:1.10.287.130 429 496 1.2E-10 T 28-03-2018 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 Pfam PF13188 PAS domain 310 349 7.7E-4 T 28-03-2018 IPR000014 PAS domain CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 Gene3D G3DSA:3.30.565.10 499 664 9.9E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 SMART SM00388 434 500 2.6E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 Gene3D G3DSA:3.30.450.20 82 193 0.064 T 28-03-2018 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 SMART SM00387 541 664 4.3E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 SMART SM00448 687 798 6.0E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02865 b15e23053e2ed411aafb22c96c67d2bd 809 Gene3D G3DSA:3.40.50.2300 685 809 1.4E-27 T 28-03-2018 CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 Gene3D G3DSA:1.25.50.10 548 865 8.3E-116 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 Gene3D G3DSA:2.60.40.1730 13 201 3.4E-23 T 28-03-2018 CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 SUPERFAMILY SSF63737 12 201 4.32E-43 T 28-03-2018 CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 Gene3D G3DSA:1.10.390.10 288 451 3.4E-49 T 28-03-2018 CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 SUPERFAMILY SSF55486 211 457 2.78E-72 T 28-03-2018 CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 Pfam PF01433 Peptidase family M1 domain 216 447 1.5E-53 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 18 864 0.0 T 28-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 452 545 1.9E-26 T 28-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 550 865 2.9E-113 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 321 333 2.1E-8 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 302 317 2.1E-8 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 184 199 2.1E-8 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CJD35_RS05880 70381e5419cd5bfa9a72702ddaa87b0c 865 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 266 276 2.1E-8 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 192 5.9E-5 T 28-03-2018 CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 SUPERFAMILY SSF51735 2 230 4.66E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 Pfam PF00106 short chain dehydrogenase 8 194 1.2E-56 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21310 1c32aaccda44035fe2ccc1e220dc5a1a 246 Gene3D G3DSA:3.40.50.720 3 244 2.6E-60 T 28-03-2018 CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 192 5.9E-5 T 28-03-2018 CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 SUPERFAMILY SSF51735 2 230 4.66E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 Pfam PF00106 short chain dehydrogenase 8 194 1.2E-56 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18190 1c32aaccda44035fe2ccc1e220dc5a1a 246 Gene3D G3DSA:3.40.50.720 3 244 2.6E-60 T 28-03-2018 CJD35_RS01215 5090e0fa7756f719cf3a9593ee8d5cd2 339 Gene3D G3DSA:1.20.120.620 22 120 3.5E-16 T 28-03-2018 CJD35_RS01215 5090e0fa7756f719cf3a9593ee8d5cd2 339 SMART SM00387 239 337 1.6E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS01215 5090e0fa7756f719cf3a9593ee8d5cd2 339 Gene3D G3DSA:3.30.565.10 129 336 1.2E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS01215 5090e0fa7756f719cf3a9593ee8d5cd2 339 Pfam PF07568 Histidine kinase 145 217 3.0E-12 T 28-03-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain CJD35_RS01215 5090e0fa7756f719cf3a9593ee8d5cd2 339 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 243 335 3.8E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS01215 5090e0fa7756f719cf3a9593ee8d5cd2 339 Pfam PF13493 Domain of unknown function (DUF4118) 23 120 1.2E-12 T 28-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain CJD35_RS01215 5090e0fa7756f719cf3a9593ee8d5cd2 339 SUPERFAMILY SSF55874 203 334 6.29E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS11675 090df79d361e7695db100430e000203f 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 298 3.0E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 Gene3D G3DSA:3.50.50.60 1 128 1.8E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.8E-71 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 1.8E-71 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 1.8E-71 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 130 142 1.8E-71 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 1.8E-71 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 1.8E-71 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 1.8E-71 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 1.8E-71 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 145 169 1.8E-71 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.3E-36 T 28-03-2018 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.3E-36 T 28-03-2018 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.3E-36 T 28-03-2018 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.3E-36 T 28-03-2018 CJD35_RS11675 090df79d361e7695db100430e000203f 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.3E-36 T 28-03-2018 CJD35_RS11675 090df79d361e7695db100430e000203f 320 SUPERFAMILY SSF51905 2 308 1.3E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 Gene3D G3DSA:3.50.50.60 248 319 8.4E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 Gene3D G3DSA:3.50.50.60 129 244 1.6E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 137 157 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CJD35_RS11675 090df79d361e7695db100430e000203f 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 309 1.0E-117 T 28-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 7 384 7.1E-107 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 6 405 41.158 T 28-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 Gene3D G3DSA:3.10.290.10 330 404 2.2E-16 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 Pfam PF01479 S4 domain 354 393 1.3E-7 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 48 70 5.3E-27 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 222 234 5.3E-27 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 168 183 5.3E-27 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 189 211 5.3E-27 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 Pfam PF00579 tRNA synthetases class I (W and Y) 39 327 8.6E-76 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 SUPERFAMILY SSF52374 7 327 3.78E-97 T 28-03-2018 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 Gene3D G3DSA:1.10.240.10 230 329 3.4E-30 T 28-03-2018 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 SUPERFAMILY SSF55174 319 398 1.7E-12 T 28-03-2018 CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 Gene3D G3DSA:3.40.50.620 4 229 2.9E-67 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS14025 7f2f1a2f37ee62e2c3c2e78f08a6122d 405 SMART SM00363 347 402 1.1E-4 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS19550 65e8c001c795c63e260f6a436703549a 351 SUPERFAMILY SSF54506 6 168 9.94E-63 T 28-03-2018 CJD35_RS19550 65e8c001c795c63e260f6a436703549a 351 Pfam PF04303 PrpF protein 7 350 8.2E-114 T 28-03-2018 IPR007400 PrpF protein CJD35_RS19550 65e8c001c795c63e260f6a436703549a 351 Gene3D G3DSA:3.10.310.10 2 180 8.2E-76 T 28-03-2018 CJD35_RS19550 65e8c001c795c63e260f6a436703549a 351 SUPERFAMILY SSF54506 172 350 1.11E-54 T 28-03-2018 CJD35_RS19550 65e8c001c795c63e260f6a436703549a 351 Gene3D G3DSA:3.10.310.10 181 336 5.6E-51 T 28-03-2018 CJD35_RS16015 f247647dc978a4c61206697d61c5b370 312 Gene3D G3DSA:3.40.50.2300 216 309 0.014 T 28-03-2018 CJD35_RS16015 f247647dc978a4c61206697d61c5b370 312 Pfam PF10686 Protein of unknown function (DUF2493) 189 254 3.8E-20 T 28-03-2018 IPR019627 Mycobacteriophage D29, Gp61 CJD35_RS15420 7470e4975bd9787fb8ea70c20a66cd7d 263 SUPERFAMILY SSF51735 8 259 2.37E-72 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15420 7470e4975bd9787fb8ea70c20a66cd7d 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 197 0.0025 T 28-03-2018 CJD35_RS15420 7470e4975bd9787fb8ea70c20a66cd7d 263 Gene3D G3DSA:3.40.50.720 49 263 1.6E-55 T 28-03-2018 CJD35_RS15420 7470e4975bd9787fb8ea70c20a66cd7d 263 Gene3D G3DSA:3.40.50.720 5 48 1.6E-11 T 28-03-2018 CJD35_RS15420 7470e4975bd9787fb8ea70c20a66cd7d 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS15420 7470e4975bd9787fb8ea70c20a66cd7d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 6.1E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15420 7470e4975bd9787fb8ea70c20a66cd7d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 6.1E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15420 7470e4975bd9787fb8ea70c20a66cd7d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 6.1E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15420 7470e4975bd9787fb8ea70c20a66cd7d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 6.1E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15420 7470e4975bd9787fb8ea70c20a66cd7d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 6.1E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15420 7470e4975bd9787fb8ea70c20a66cd7d 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 258 1.6E-54 T 28-03-2018 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 Gene3D G3DSA:3.40.1380.10 27 245 1.0E-65 T 28-03-2018 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 PRINTS PR00126 ATP synthase gamma subunit signature 241 260 1.2E-29 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 PRINTS PR00126 ATP synthase gamma subunit signature 272 293 1.2E-29 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 PRINTS PR00126 ATP synthase gamma subunit signature 78 97 1.2E-29 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 PRINTS PR00126 ATP synthase gamma subunit signature 173 190 1.2E-29 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 Gene3D G3DSA:1.10.287.80 246 289 1.4E-15 T 28-03-2018 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 PIRSF PIRSF039089 1 294 9.8E-99 T 28-03-2018 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 294 32.805 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 294 4.0E-100 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 280 293 - T 28-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 Pfam PF00231 ATP synthase 3 294 1.1E-91 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09745 b514a9727dc067095ab059188bdbedb5 294 SUPERFAMILY SSF52943 2 294 3.01E-86 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS20135 137a26ca1fba4c1dfa60cc6f41a8ec2a 549 SUPERFAMILY SSF109709 94 200 1.96E-19 T 28-03-2018 CJD35_RS20135 137a26ca1fba4c1dfa60cc6f41a8ec2a 549 TIGRFAM TIGR03734 PRTRC_parB: PRTRC system ParB family protein 16 252 1.5E-92 T 28-03-2018 IPR022396 ParB-related, ThiF-related cassette, ParB CJD35_RS20135 137a26ca1fba4c1dfa60cc6f41a8ec2a 549 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 20 184 1.3E-36 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CJD35_RS20135 137a26ca1fba4c1dfa60cc6f41a8ec2a 549 Gene3D G3DSA:3.90.1530.10 2 96 3.9E-26 T 28-03-2018 CJD35_RS20135 137a26ca1fba4c1dfa60cc6f41a8ec2a 549 Gene3D G3DSA:1.10.10.60 97 146 6.1E-6 T 28-03-2018 CJD35_RS20135 137a26ca1fba4c1dfa60cc6f41a8ec2a 549 SMART SM00470 9 102 2.6E-23 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS20135 137a26ca1fba4c1dfa60cc6f41a8ec2a 549 SUPERFAMILY SSF110849 11 104 4.71E-20 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS20135 137a26ca1fba4c1dfa60cc6f41a8ec2a 549 Pfam PF02195 ParB-like nuclease domain 11 101 8.0E-19 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS20135 137a26ca1fba4c1dfa60cc6f41a8ec2a 549 Pfam PF02954 Bacterial regulatory protein, Fis family 118 145 3.0E-5 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS02590 5ee7e786022d3f4c405eca4086d4bf02 526 Gene3D G3DSA:1.10.730.10 277 341 1.0E-5 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS02590 5ee7e786022d3f4c405eca4086d4bf02 526 SUPERFAMILY SSF52374 16 323 2.2E-55 T 28-03-2018 CJD35_RS02590 5ee7e786022d3f4c405eca4086d4bf02 526 TIGRFAM TIGR00467 lysS_arch: lysine--tRNA ligase 42 521 1.5E-49 T 28-03-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CJD35_RS02590 5ee7e786022d3f4c405eca4086d4bf02 526 Pfam PF01921 tRNA synthetases class I (K) 15 367 3.0E-135 T 28-03-2018 CJD35_RS02590 5ee7e786022d3f4c405eca4086d4bf02 526 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 47 56 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS02590 5ee7e786022d3f4c405eca4086d4bf02 526 Gene3D G3DSA:1.10.10.350 429 524 1.8E-19 T 28-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CJD35_RS02590 5ee7e786022d3f4c405eca4086d4bf02 526 Gene3D G3DSA:3.40.50.620 14 276 2.4E-50 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS02590 5ee7e786022d3f4c405eca4086d4bf02 526 Hamap MF_00177 Lysine--tRNA ligase [lysS]. 15 524 28.682 T 28-03-2018 IPR002904 Lysine-tRNA ligase GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 CJD35_RS02590 5ee7e786022d3f4c405eca4086d4bf02 526 SUPERFAMILY SSF48163 333 524 3.92E-40 T 28-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CJD35_RS01200 66862fe2f871df5a7a9f7217e39160a6 117 Gene3D G3DSA:3.30.70.100 5 117 6.3E-17 T 28-03-2018 CJD35_RS01200 66862fe2f871df5a7a9f7217e39160a6 117 SUPERFAMILY SSF54909 27 109 2.46E-15 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS01200 66862fe2f871df5a7a9f7217e39160a6 117 Pfam PF03992 Antibiotic biosynthesis monooxygenase 28 96 5.5E-11 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 Gene3D G3DSA:3.30.470.20 259 368 1.3E-26 T 28-03-2018 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 543 894 7.6E-89 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 SUPERFAMILY SSF56059 9 405 1.15E-144 T 28-03-2018 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 Gene3D G3DSA:3.20.20.60 560 899 2.3E-116 T 28-03-2018 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 Gene3D G3DSA:3.30.1490.20 14 132 3.8E-30 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 PIRSF PIRSF000853 13 900 0.0 T 28-03-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 15 896 0.0 T 28-03-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 Gene3D G3DSA:1.20.80.30 133 213 2.1E-34 T 28-03-2018 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 Pfam PF00391 PEP-utilising enzyme, mobile domain 447 528 3.9E-28 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 77 383 9.2E-51 T 28-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 33 72 4.2E-9 T 28-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 Gene3D G3DSA:1.10.189.10 369 416 3.5E-22 T 28-03-2018 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 SUPERFAMILY SSF51621 536 896 1.54E-130 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 Gene3D G3DSA:3.50.30.10 417 559 5.2E-44 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 786 804 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 SUPERFAMILY SSF52009 412 537 7.19E-39 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CJD35_RS12640 17ac7dc69a1239a1d6dab9f37ab18777 900 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 475 486 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CJD35_RS06395 8535fdc87211b82754737e431f7076dd 396 Gene3D G3DSA:2.40.110.10 124 221 4.2E-34 T 28-03-2018 CJD35_RS06395 8535fdc87211b82754737e431f7076dd 396 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 392 4.1E-27 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS06395 8535fdc87211b82754737e431f7076dd 396 SUPERFAMILY SSF56645 1 246 6.28E-76 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS06395 8535fdc87211b82754737e431f7076dd 396 Gene3D G3DSA:1.20.140.10 222 396 1.2E-37 T 28-03-2018 CJD35_RS06395 8535fdc87211b82754737e431f7076dd 396 SUPERFAMILY SSF47203 234 394 9.13E-23 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS06395 8535fdc87211b82754737e431f7076dd 396 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 124 4.1E-24 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS06395 8535fdc87211b82754737e431f7076dd 396 Gene3D G3DSA:1.10.540.10 1 123 4.4E-34 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS06395 8535fdc87211b82754737e431f7076dd 396 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 222 4.3E-20 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS06100 383d825770eef2c38e3ccdec5fb8fae7 184 Gene3D G3DSA:1.20.1260.10 12 156 9.8E-32 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS06100 383d825770eef2c38e3ccdec5fb8fae7 184 SUPERFAMILY SSF47240 19 152 7.82E-19 T 28-03-2018 IPR009078 Ferritin-like superfamily CJD35_RS06100 383d825770eef2c38e3ccdec5fb8fae7 184 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 21 184 8.4E-65 T 28-03-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 CJD35_RS06100 383d825770eef2c38e3ccdec5fb8fae7 184 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 1 184 26.717 T 28-03-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 CJD35_RS15660 80014f0e93ed3a7d1901f21932769b44 333 Pfam PF00107 Zinc-binding dehydrogenase 157 289 4.2E-18 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS15660 80014f0e93ed3a7d1901f21932769b44 333 Gene3D G3DSA:3.40.50.720 148 274 1.6E-24 T 28-03-2018 CJD35_RS15660 80014f0e93ed3a7d1901f21932769b44 333 Pfam PF16884 N-terminal domain of oxidoreductase 6 110 6.0E-32 T 28-03-2018 CJD35_RS15660 80014f0e93ed3a7d1901f21932769b44 333 SUPERFAMILY SSF51735 123 297 4.82E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15660 80014f0e93ed3a7d1901f21932769b44 333 SMART SM00829 18 330 0.0016 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS15660 80014f0e93ed3a7d1901f21932769b44 333 SUPERFAMILY SSF50129 4 138 5.79E-31 T 28-03-2018 IPR011032 GroES-like CJD35_RS15660 80014f0e93ed3a7d1901f21932769b44 333 Gene3D G3DSA:3.90.180.10 1 147 4.9E-34 T 28-03-2018 CJD35_RS10880 07c3e98cbfd246af768c3b8e14c8f3f4 278 Gene3D G3DSA:3.40.50.720 26 271 4.3E-46 T 28-03-2018 CJD35_RS10880 07c3e98cbfd246af768c3b8e14c8f3f4 278 SUPERFAMILY SSF51735 28 267 3.44E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10880 07c3e98cbfd246af768c3b8e14c8f3f4 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 106 117 4.5E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS10880 07c3e98cbfd246af768c3b8e14c8f3f4 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 198 4.5E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS10880 07c3e98cbfd246af768c3b8e14c8f3f4 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 216 4.5E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS10880 07c3e98cbfd246af768c3b8e14c8f3f4 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 230 250 4.5E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS10880 07c3e98cbfd246af768c3b8e14c8f3f4 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 30 47 4.5E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS10880 07c3e98cbfd246af768c3b8e14c8f3f4 278 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 41 265 1.4E-36 T 28-03-2018 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 Gene3D G3DSA:1.10.238.10 156 175 4.1E-6 T 28-03-2018 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 SUPERFAMILY SSF47473 62 189 7.43E-18 T 28-03-2018 IPR011992 EF-hand domain pair CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 Gene3D G3DSA:1.10.238.10 176 201 9.0E-5 T 28-03-2018 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 Gene3D G3DSA:1.10.238.10 53 71 4.2E-6 T 28-03-2018 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 Pfam PF13202 EF hand 46 60 0.003 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 Pfam PF13202 EF hand 147 162 0.0015 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 Pfam PF13202 EF hand 168 186 2.5E-5 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 Pfam PF13202 EF hand 92 113 0.0025 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 Gene3D G3DSA:1.10.1330.10 107 155 2.1E-10 T 28-03-2018 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 Gene3D G3DSA:1.10.238.10 3 52 0.041 T 28-03-2018 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 ProSitePatterns PS00018 EF-hand calcium-binding domain. 173 185 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 ProSitePatterns PS00018 EF-hand calcium-binding domain. 100 112 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 Gene3D G3DSA:1.10.238.10 72 106 5.3E-8 T 28-03-2018 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 SMART SM00054 91 119 0.23 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 SMART SM00054 43 67 12.0 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 SMART SM00054 164 192 0.05 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 CJD35_RS08235 cd9961123214bd872007c1e17a92e2a0 207 ProSitePatterns PS00018 EF-hand calcium-binding domain. 48 60 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site CJD35_RS03995 a9d273ef8b36600084d859f65f67d773 148 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 2 147 19.766 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 CJD35_RS03995 a9d273ef8b36600084d859f65f67d773 148 Pfam PF01029 NusB family 10 144 5.0E-30 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CJD35_RS03995 a9d273ef8b36600084d859f65f67d773 148 SUPERFAMILY SSF48013 7 146 1.96E-33 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CJD35_RS03995 a9d273ef8b36600084d859f65f67d773 148 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 8 145 5.9E-36 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 CJD35_RS03995 a9d273ef8b36600084d859f65f67d773 148 Gene3D G3DSA:1.10.940.10 3 148 1.4E-34 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CJD35_RS05830 b98064badf357e68478d497f834ea288 418 SMART SM00382 170 355 7.3E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS05830 b98064badf357e68478d497f834ea288 418 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 418 242.404 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CJD35_RS05830 b98064badf357e68478d497f834ea288 418 Gene3D G3DSA:2.40.50.140 49 116 1.8E-28 T 28-03-2018 CJD35_RS05830 b98064badf357e68478d497f834ea288 418 SMART SM00959 5 47 1.0E-18 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CJD35_RS05830 b98064badf357e68478d497f834ea288 418 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 418 7.5E-212 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CJD35_RS05830 b98064badf357e68478d497f834ea288 418 Gene3D G3DSA:3.40.50.300 129 418 1.9E-54 T 28-03-2018 CJD35_RS05830 b98064badf357e68478d497f834ea288 418 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 6.7E-18 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CJD35_RS05830 b98064badf357e68478d497f834ea288 418 SUPERFAMILY SSF50249 49 125 2.28E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS05830 b98064badf357e68478d497f834ea288 418 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 8.7E-30 T 28-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CJD35_RS05830 b98064badf357e68478d497f834ea288 418 SUPERFAMILY SSF68912 1 46 9.02E-12 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CJD35_RS05830 b98064badf357e68478d497f834ea288 418 Gene3D G3DSA:1.10.720.10 1 43 1.0E-13 T 28-03-2018 CJD35_RS05830 b98064badf357e68478d497f834ea288 418 SUPERFAMILY SSF52540 90 371 3.09E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05830 b98064badf357e68478d497f834ea288 418 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 159 363 2.6E-23 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS05830 b98064badf357e68478d497f834ea288 418 SMART SM00357 52 118 3.4E-15 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Gene3D G3DSA:3.20.20.140 669 943 1.2E-18 T 28-03-2018 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Gene3D G3DSA:2.30.40.10 605 668 3.6E-14 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 SUPERFAMILY SSF51338 588 658 2.95E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 SUPERFAMILY SSF51338 954 996 2.95E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Pfam PF01979 Amidohydrolase family 887 989 9.1E-7 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Pfam PF07676 WD40-like Beta Propeller Repeat 369 392 3.5E-5 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Pfam PF07676 WD40-like Beta Propeller Repeat 329 343 0.22 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Pfam PF07676 WD40-like Beta Propeller Repeat 510 525 0.015 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Pfam PF07676 WD40-like Beta Propeller Repeat 94 116 8.9E-8 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Pfam PF07676 WD40-like Beta Propeller Repeat 225 249 0.017 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Pfam PF07676 WD40-like Beta Propeller Repeat 171 195 3.5E-5 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Pfam PF07676 WD40-like Beta Propeller Repeat 455 484 0.073 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Pfam PF07676 WD40-like Beta Propeller Repeat 129 161 4.8E-10 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Gene3D G3DSA:2.30.40.10 944 998 0.015 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Gene3D G3DSA:2.140.10.30 21 188 1.4E-34 T 28-03-2018 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Gene3D G3DSA:2.140.10.30 189 335 1.8E-13 T 28-03-2018 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 SUPERFAMILY SSF51556 657 950 4.03E-32 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Gene3D G3DSA:2.130.10.150 336 491 9.0E-28 T 28-03-2018 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 SUPERFAMILY SSF82171 53 209 9.02E-58 T 28-03-2018 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 SUPERFAMILY SSF82171 314 528 9.02E-58 T 28-03-2018 CJD35_RS11915 10a0a04bf5cbe49d1400ed1c608de4ba 1047 Gene3D G3DSA:2.130.10.10 492 604 0.041 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 PRINTS PR00477 Phosphoglycerate kinase family signature 353 364 2.2E-75 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 2.2E-75 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 PRINTS PR00477 Phosphoglycerate kinase family signature 376 393 2.2E-75 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 PRINTS PR00477 Phosphoglycerate kinase family signature 316 341 2.2E-75 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 PRINTS PR00477 Phosphoglycerate kinase family signature 112 127 2.2E-75 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 2.2E-75 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 2.2E-75 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 PRINTS PR00477 Phosphoglycerate kinase family signature 13 29 2.2E-75 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 PRINTS PR00477 Phosphoglycerate kinase family signature 34 56 2.2E-75 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 PIRSF PIRSF000724 1 400 1.3E-135 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 Gene3D G3DSA:3.40.50.1260 182 388 9.7E-71 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 Gene3D G3DSA:3.40.50.1260 5 181 2.1E-62 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 SUPERFAMILY SSF53748 5 398 8.36E-141 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 Pfam PF00162 Phosphoglycerate kinase 13 390 3.3E-139 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13245 ecf7d82494890e5c00f3a57b6eb3bb8c 400 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 7 400 37.928 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 ProSitePatterns PS00211 ABC transporters family signature. 753 767 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 SUPERFAMILY SSF52540 343 482 3.24E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 SUPERFAMILY SSF52540 138 272 3.24E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 SUPERFAMILY SSF52540 3 84 3.24E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:1.20.1580.10 88 400 3.3E-57 T 28-03-2018 CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:3.40.50.300 5 31 0.06 T 28-03-2018 CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:3.40.50.300 32 65 0.11 T 28-03-2018 CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 Pfam PF00005 ABC transporter 533 784 5.1E-7 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 SUPERFAMILY SSF52540 607 836 2.99E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 SUPERFAMILY SSF52540 527 571 2.99E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:3.40.50.300 521 597 1.1E-5 T 28-03-2018 CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:3.40.50.300 740 843 1.1E-27 T 28-03-2018 CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS21330 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:1.20.1580.10 616 739 5.7E-38 T 28-03-2018 CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 ProSitePatterns PS00211 ABC transporters family signature. 753 767 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 SUPERFAMILY SSF52540 343 482 3.24E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 SUPERFAMILY SSF52540 138 272 3.24E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 SUPERFAMILY SSF52540 3 84 3.24E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:1.20.1580.10 88 400 3.3E-57 T 28-03-2018 CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:3.40.50.300 5 31 0.06 T 28-03-2018 CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:3.40.50.300 32 65 0.11 T 28-03-2018 CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 Pfam PF00005 ABC transporter 533 784 5.1E-7 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 SUPERFAMILY SSF52540 607 836 2.99E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 SUPERFAMILY SSF52540 527 571 2.99E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:3.40.50.300 521 597 1.1E-5 T 28-03-2018 CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:3.40.50.300 740 843 1.1E-27 T 28-03-2018 CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS18210 1f0498d0243990af20cb93cd4647c58e 863 Gene3D G3DSA:1.20.1580.10 616 739 5.7E-38 T 28-03-2018 CJD35_RS12100 685a2dab21828a062c57b79c5ed50664 479 Gene3D G3DSA:3.30.465.10 96 239 1.5E-35 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJD35_RS12100 685a2dab21828a062c57b79c5ed50664 479 Gene3D G3DSA:1.10.45.10 433 472 1.0E-13 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CJD35_RS12100 685a2dab21828a062c57b79c5ed50664 479 Pfam PF02913 FAD linked oxidases, C-terminal domain 221 472 1.8E-45 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CJD35_RS12100 685a2dab21828a062c57b79c5ed50664 479 SUPERFAMILY SSF56176 4 217 1.71E-68 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJD35_RS12100 685a2dab21828a062c57b79c5ed50664 479 SUPERFAMILY SSF55103 222 474 5.56E-49 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CJD35_RS12100 685a2dab21828a062c57b79c5ed50664 479 Gene3D G3DSA:3.30.43.10 3 95 3.2E-26 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CJD35_RS12100 685a2dab21828a062c57b79c5ed50664 479 Pfam PF01565 FAD binding domain 42 180 6.0E-34 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CJD35_RS08270 0e556a36246656d5c4d4b59b5a2b911b 193 TIGRFAM TIGR01367 pyrE_Therm: orotate phosphoribosyltransferase 6 191 1.5E-65 T 28-03-2018 IPR006273 Orotate phosphoribosyltransferase, bacterial GO:0004588|GO:0019856 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS08270 0e556a36246656d5c4d4b59b5a2b911b 193 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 193 25.559 T 28-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS08270 0e556a36246656d5c4d4b59b5a2b911b 193 Gene3D G3DSA:3.40.50.2020 1 171 8.0E-26 T 28-03-2018 CJD35_RS08270 0e556a36246656d5c4d4b59b5a2b911b 193 SUPERFAMILY SSF53271 6 191 3.83E-34 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CJD35_RS08270 0e556a36246656d5c4d4b59b5a2b911b 193 Pfam PF00156 Phosphoribosyl transferase domain 46 175 2.0E-12 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CJD35_RS07715 aee20254dd589a29efc606ee6648b20a 150 SUPERFAMILY SSF52833 3 148 9.84E-43 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS07715 aee20254dd589a29efc606ee6648b20a 150 Gene3D G3DSA:3.40.30.10 67 150 1.8E-8 T 28-03-2018 CJD35_RS07715 aee20254dd589a29efc606ee6648b20a 150 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 7 147 6.0E-39 T 28-03-2018 CJD35_RS07715 aee20254dd589a29efc606ee6648b20a 150 PIRSF PIRSF000216 1 150 1.2E-40 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 Gene3D G3DSA:1.10.3860.10 17 420 5.6E-111 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 SUPERFAMILY SSF118215 21 414 1.31E-115 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 14 439 37.282 T 28-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 PRINTS PR00173 Glutamate-aspartate symporter signature 204 223 1.1E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 1.1E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 PRINTS PR00173 Glutamate-aspartate symporter signature 157 179 1.1E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 PRINTS PR00173 Glutamate-aspartate symporter signature 19 39 1.1E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 1.1E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 PRINTS PR00173 Glutamate-aspartate symporter signature 339 358 1.1E-25 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 48 63 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 307 330 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CJD35_RS02955 d8fe62aa52848ae35826bf842f6a582a 443 Pfam PF00375 Sodium:dicarboxylate symporter family 21 413 1.7E-105 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14420 71b550e9031922bf48b26ab8e1813ba2 443 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 21 431 1.3E-192 T 28-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14420 71b550e9031922bf48b26ab8e1813ba2 443 SUPERFAMILY SSF142019 16 254 1.2E-83 T 28-03-2018 CJD35_RS14420 71b550e9031922bf48b26ab8e1813ba2 443 SUPERFAMILY SSF142984 255 340 5.1E-24 T 28-03-2018 CJD35_RS14420 71b550e9031922bf48b26ab8e1813ba2 443 SMART SM00928 345 390 8.4E-25 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14420 71b550e9031922bf48b26ab8e1813ba2 443 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 60 230 1.3E-44 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14420 71b550e9031922bf48b26ab8e1813ba2 443 Pfam PF10531 SLBB domain 257 306 5.0E-8 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14420 71b550e9031922bf48b26ab8e1813ba2 443 SUPERFAMILY SSF140490 341 435 6.41E-36 T 28-03-2018 CJD35_RS14420 71b550e9031922bf48b26ab8e1813ba2 443 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 348 429 5.8E-29 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14420 71b550e9031922bf48b26ab8e1813ba2 443 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 358 369 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS03435 27b535e827d7bb2b529476cdd81c6268 322 Gene3D G3DSA:3.40.47.10 3 162 1.9E-35 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS03435 27b535e827d7bb2b529476cdd81c6268 322 Gene3D G3DSA:3.40.47.10 163 322 9.0E-45 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS03435 27b535e827d7bb2b529476cdd81c6268 322 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 108 189 8.8E-33 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CJD35_RS03435 27b535e827d7bb2b529476cdd81c6268 322 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 4 321 1.2E-126 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CJD35_RS03435 27b535e827d7bb2b529476cdd81c6268 322 SUPERFAMILY SSF53901 7 322 5.91E-70 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS03435 27b535e827d7bb2b529476cdd81c6268 322 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 321 1.2E-36 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CJD35_RS03435 27b535e827d7bb2b529476cdd81c6268 322 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 3 322 70.03 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CJD35_RS10570 ceb12443d06f0fdc732697f22295cc2d 297 SUPERFAMILY SSF103481 192 283 6.41E-14 T 28-03-2018 CJD35_RS10570 ceb12443d06f0fdc732697f22295cc2d 297 Pfam PF00892 EamA-like transporter family 6 135 6.7E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS10570 ceb12443d06f0fdc732697f22295cc2d 297 Pfam PF00892 EamA-like transporter family 153 282 7.7E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS10570 ceb12443d06f0fdc732697f22295cc2d 297 SUPERFAMILY SSF103481 38 138 1.57E-12 T 28-03-2018 CJD35_RS20800 f0677971a2ff509ac7604389f5d36210 281 PIRSF PIRSF003073 2 256 1.3E-89 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS20800 f0677971a2ff509ac7604389f5d36210 281 SMART SM00382 103 235 1.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS20800 f0677971a2ff509ac7604389f5d36210 281 Gene3D G3DSA:3.40.50.300 49 235 1.9E-15 T 28-03-2018 CJD35_RS20800 f0677971a2ff509ac7604389f5d36210 281 SUPERFAMILY SSF52540 70 233 2.3E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20800 f0677971a2ff509ac7604389f5d36210 281 Pfam PF01695 IstB-like ATP binding protein 57 234 6.4E-62 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS19615 f0677971a2ff509ac7604389f5d36210 281 PIRSF PIRSF003073 2 256 1.3E-89 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS19615 f0677971a2ff509ac7604389f5d36210 281 SMART SM00382 103 235 1.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS19615 f0677971a2ff509ac7604389f5d36210 281 Gene3D G3DSA:3.40.50.300 49 235 1.9E-15 T 28-03-2018 CJD35_RS19615 f0677971a2ff509ac7604389f5d36210 281 SUPERFAMILY SSF52540 70 233 2.3E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS19615 f0677971a2ff509ac7604389f5d36210 281 Pfam PF01695 IstB-like ATP binding protein 57 234 6.4E-62 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS06550 f0677971a2ff509ac7604389f5d36210 281 PIRSF PIRSF003073 2 256 1.3E-89 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS06550 f0677971a2ff509ac7604389f5d36210 281 SMART SM00382 103 235 1.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS06550 f0677971a2ff509ac7604389f5d36210 281 Gene3D G3DSA:3.40.50.300 49 235 1.9E-15 T 28-03-2018 CJD35_RS06550 f0677971a2ff509ac7604389f5d36210 281 SUPERFAMILY SSF52540 70 233 2.3E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06550 f0677971a2ff509ac7604389f5d36210 281 Pfam PF01695 IstB-like ATP binding protein 57 234 6.4E-62 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 SMART SM00387 40 190 2.7E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 Gene3D G3DSA:3.40.50.670 416 826 6.1E-103 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 SUPERFAMILY SSF55874 14 229 5.24E-67 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 ProSitePatterns PS00177 DNA topoisomerase II signature. 439 447 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 Pfam PF01751 Toprim domain 436 546 2.5E-17 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 SMART SM00433 44 822 4.0E-248 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 Gene3D G3DSA:3.30.565.10 26 236 3.1E-71 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 187 5.4E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR01159 DNA gyrase subunit B signature 391 411 7.8E-67 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR01159 DNA gyrase subunit B signature 329 345 7.8E-67 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR01159 DNA gyrase subunit B signature 782 794 7.8E-67 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR01159 DNA gyrase subunit B signature 14 24 7.8E-67 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR01159 DNA gyrase subunit B signature 798 814 7.8E-67 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR01159 DNA gyrase subunit B signature 211 224 7.8E-67 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR01159 DNA gyrase subunit B signature 487 496 7.8E-67 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR01159 DNA gyrase subunit B signature 196 211 7.8E-67 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR01159 DNA gyrase subunit B signature 377 391 7.8E-67 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR01159 DNA gyrase subunit B signature 237 259 7.8E-67 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 SUPERFAMILY SSF56719 411 576 3.14E-83 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 SUPERFAMILY SSF56719 755 821 3.14E-83 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 757 818 3.7E-28 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 Pfam PF00204 DNA gyrase B 238 407 5.5E-57 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR00418 DNA topoisomerase II family signature 503 519 1.6E-69 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR00418 DNA topoisomerase II family signature 79 92 1.6E-69 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR00418 DNA topoisomerase II family signature 761 777 1.6E-69 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR00418 DNA topoisomerase II family signature 521 538 1.6E-69 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR00418 DNA topoisomerase II family signature 437 451 1.6E-69 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR00418 DNA topoisomerase II family signature 285 298 1.6E-69 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR00418 DNA topoisomerase II family signature 126 140 1.6E-69 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR00418 DNA topoisomerase II family signature 541 553 1.6E-69 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 PRINTS PR00418 DNA topoisomerase II family signature 44 59 1.6E-69 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 SUPERFAMILY SSF54211 238 408 5.5E-57 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 11 829 96.749 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 Gene3D G3DSA:3.30.230.10 237 409 1.3E-61 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJD35_RS06000 884288ea1977660b4ba33a40266104a0 829 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 14 829 3.0E-291 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS06420 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:3.30.420.10 125 354 5.4E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS06420 d43ca9b32f88d36469eb48e3ad611cfb 504 Pfam PF00665 Integrase core domain 129 254 1.0E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS06420 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:1.10.10.60 2 44 1.9E-4 T 28-03-2018 CJD35_RS17235 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:3.30.420.10 125 354 5.4E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS17235 d43ca9b32f88d36469eb48e3ad611cfb 504 Pfam PF00665 Integrase core domain 129 254 1.0E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS17235 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:1.10.10.60 2 44 1.9E-4 T 28-03-2018 CJD35_RS15190 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:3.30.420.10 125 354 5.4E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS15190 d43ca9b32f88d36469eb48e3ad611cfb 504 Pfam PF00665 Integrase core domain 129 254 1.0E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS15190 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:1.10.10.60 2 44 1.9E-4 T 28-03-2018 CJD35_RS05555 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:3.30.420.10 125 354 5.4E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS05555 d43ca9b32f88d36469eb48e3ad611cfb 504 Pfam PF00665 Integrase core domain 129 254 1.0E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS05555 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:1.10.10.60 2 44 1.9E-4 T 28-03-2018 CJD35_RS05385 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:3.30.420.10 125 354 5.4E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS05385 d43ca9b32f88d36469eb48e3ad611cfb 504 Pfam PF00665 Integrase core domain 129 254 1.0E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS05385 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:1.10.10.60 2 44 1.9E-4 T 28-03-2018 CJD35_RS02620 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:3.30.420.10 125 354 5.4E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS02620 d43ca9b32f88d36469eb48e3ad611cfb 504 Pfam PF00665 Integrase core domain 129 254 1.0E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS02620 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:1.10.10.60 2 44 1.9E-4 T 28-03-2018 CJD35_RS10775 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:3.30.420.10 125 354 5.4E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS10775 d43ca9b32f88d36469eb48e3ad611cfb 504 Pfam PF00665 Integrase core domain 129 254 1.0E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS10775 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:1.10.10.60 2 44 1.9E-4 T 28-03-2018 CJD35_RS12440 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:3.30.420.10 125 354 5.4E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS12440 d43ca9b32f88d36469eb48e3ad611cfb 504 Pfam PF00665 Integrase core domain 129 254 1.0E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS12440 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:1.10.10.60 2 44 1.9E-4 T 28-03-2018 CJD35_RS11200 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:3.30.420.10 125 354 5.4E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS11200 d43ca9b32f88d36469eb48e3ad611cfb 504 Pfam PF00665 Integrase core domain 129 254 1.0E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS11200 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:1.10.10.60 2 44 1.9E-4 T 28-03-2018 CJD35_RS16925 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:3.30.420.10 125 354 5.4E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS16925 d43ca9b32f88d36469eb48e3ad611cfb 504 Pfam PF00665 Integrase core domain 129 254 1.0E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS16925 d43ca9b32f88d36469eb48e3ad611cfb 504 Gene3D G3DSA:1.10.10.60 2 44 1.9E-4 T 28-03-2018 CJD35_RS16965 c849a6c9c4ca7180b8c1620d9a4e30b0 170 SUPERFAMILY SSF46785 31 141 2.16E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16965 c849a6c9c4ca7180b8c1620d9a4e30b0 170 Gene3D G3DSA:1.10.10.10 13 88 4.6E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16965 c849a6c9c4ca7180b8c1620d9a4e30b0 170 Pfam PF01475 Ferric uptake regulator family 32 135 1.3E-7 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CJD35_RS12785 03606355bfb4989610e92511720999b8 1177 SUPERFAMILY SSF160975 833 882 1.05E-6 T 28-03-2018 CJD35_RS12785 03606355bfb4989610e92511720999b8 1177 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1032 0.0 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS12785 03606355bfb4989610e92511720999b8 1177 Pfam PF14579 Helix-hairpin-helix motif 798 896 2.3E-26 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS12785 03606355bfb4989610e92511720999b8 1177 SMART SM00481 7 74 2.6E-11 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CJD35_RS12785 03606355bfb4989610e92511720999b8 1177 Pfam PF02811 PHP domain 13 175 1.8E-26 T 28-03-2018 IPR004013 PHP domain GO:0003824 CJD35_RS12785 03606355bfb4989610e92511720999b8 1177 Gene3D G3DSA:2.40.50.140 989 1074 4.5E-4 T 28-03-2018 CJD35_RS12785 03606355bfb4989610e92511720999b8 1177 SUPERFAMILY SSF89550 20 266 1.35E-5 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CJD35_RS12785 03606355bfb4989610e92511720999b8 1177 Gene3D G3DSA:3.20.20.140 5 257 1.5E-28 T 28-03-2018 CJD35_RS12785 03606355bfb4989610e92511720999b8 1177 Gene3D G3DSA:1.10.150.280 782 894 1.0E-9 T 28-03-2018 CJD35_RS12785 03606355bfb4989610e92511720999b8 1177 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 294 723 1.0E-165 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 SUPERFAMILY SSF82714 723 808 1.26E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 Gene3D G3DSA:1.20.1640.10 815 1028 1.3E-39 T 28-03-2018 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 Gene3D G3DSA:1.20.1640.10 275 498 4.9E-44 T 28-03-2018 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 Gene3D G3DSA:3.30.2090.10 180 274 7.2E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 Gene3D G3DSA:3.30.70.1440 672 768 1.4E-16 T 28-03-2018 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 SUPERFAMILY SSF82693 565 670 6.28E-28 T 28-03-2018 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1040 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 Gene3D G3DSA:3.30.70.1430 38 140 1.8E-27 T 28-03-2018 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 Gene3D G3DSA:3.30.70.1430 567 668 7.6E-18 T 28-03-2018 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 SUPERFAMILY SSF82693 135 182 1.92E-21 T 28-03-2018 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 SUPERFAMILY SSF82693 274 330 1.92E-21 T 28-03-2018 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 SUPERFAMILY SSF82693 38 130 1.15E-25 T 28-03-2018 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1025 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 3.8E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 3.8E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.8E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.8E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.8E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.8E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.8E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.8E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.8E-107 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 SUPERFAMILY SSF82714 182 272 4.19E-24 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 SUPERFAMILY SSF82866 805 1029 1.12E-45 T 28-03-2018 CJD35_RS00585 6f4e88c8ea47f23e686f2aec388baa67 1050 SUPERFAMILY SSF82866 296 497 2.49E-47 T 28-03-2018 CJD35_RS12220 e4545d7a321b958b87a4e0e0f3951eb4 96 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 8.9E-18 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS12220 e4545d7a321b958b87a4e0e0f3951eb4 96 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 8.9E-18 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS12220 e4545d7a321b958b87a4e0e0f3951eb4 96 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 8.9E-18 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS12220 e4545d7a321b958b87a4e0e0f3951eb4 96 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 6.6E-36 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CJD35_RS12220 e4545d7a321b958b87a4e0e0f3951eb4 96 SUPERFAMILY SSF47729 1 91 3.97E-30 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS12220 e4545d7a321b958b87a4e0e0f3951eb4 96 Gene3D G3DSA:4.10.520.10 1 94 6.1E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS12220 e4545d7a321b958b87a4e0e0f3951eb4 96 SMART SM00411 1 91 4.2E-39 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS12220 e4545d7a321b958b87a4e0e0f3951eb4 96 Pfam PF00216 Bacterial DNA-binding protein 1 91 2.2E-30 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS12220 e4545d7a321b958b87a4e0e0f3951eb4 96 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CJD35_RS14770 c635e358ed8cf2a236b43f0bbcaad147 447 Pfam PF01134 Glucose inhibited division protein A 5 377 1.8E-102 T 28-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CJD35_RS14770 c635e358ed8cf2a236b43f0bbcaad147 447 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 443 34.51 T 28-03-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 CJD35_RS14770 c635e358ed8cf2a236b43f0bbcaad147 447 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 5 441 9.3E-167 T 28-03-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 CJD35_RS14770 c635e358ed8cf2a236b43f0bbcaad147 447 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 347 370 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CJD35_RS14770 c635e358ed8cf2a236b43f0bbcaad147 447 SUPERFAMILY SSF51905 3 376 1.83E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS14770 c635e358ed8cf2a236b43f0bbcaad147 447 Gene3D G3DSA:3.50.50.60 1 380 5.5E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS12700 8f6e43782542906d8800749f4e004eab 299 Pfam PF04338 Protein of unknown function, DUF481 94 299 1.1E-43 T 28-03-2018 IPR007433 Protein of unknown function DUF481 CJD35_RS14230 5b53f4d48f9f670532284aeda0883a84 180 PRINTS PR00813 Bacterial general secretion pathway protein G signature 82 100 4.2E-18 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CJD35_RS14230 5b53f4d48f9f670532284aeda0883a84 180 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 71 4.2E-18 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 CJD35_RS14230 5b53f4d48f9f670532284aeda0883a84 180 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 45 65 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CJD35_RS14230 5b53f4d48f9f670532284aeda0883a84 180 Gene3D G3DSA:3.30.700.10 60 177 3.5E-26 T 28-03-2018 CJD35_RS14230 5b53f4d48f9f670532284aeda0883a84 180 SUPERFAMILY SSF54523 74 177 2.25E-34 T 28-03-2018 CJD35_RS14230 5b53f4d48f9f670532284aeda0883a84 180 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 45 177 2.5E-50 T 28-03-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 CJD35_RS14230 5b53f4d48f9f670532284aeda0883a84 180 Pfam PF07963 Prokaryotic N-terminal methylation motif 42 66 1.4E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CJD35_RS14230 5b53f4d48f9f670532284aeda0883a84 180 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 45 67 3.1E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CJD35_RS14230 5b53f4d48f9f670532284aeda0883a84 180 Pfam PF08334 Type II secretion system (T2SS), protein G 69 177 1.1E-37 T 28-03-2018 IPR013545 Type II secretion system protein G CJD35_RS09820 6be2b563b8e8afc5eef3953cc2ed9568 176 SUPERFAMILY SSF56420 2 173 2.22E-63 T 28-03-2018 IPR023635 Peptide deformylase CJD35_RS09820 6be2b563b8e8afc5eef3953cc2ed9568 176 PIRSF PIRSF004749 1 176 3.2E-58 T 28-03-2018 IPR023635 Peptide deformylase CJD35_RS09820 6be2b563b8e8afc5eef3953cc2ed9568 176 Pfam PF01327 Polypeptide deformylase 4 162 3.6E-54 T 28-03-2018 IPR023635 Peptide deformylase CJD35_RS09820 6be2b563b8e8afc5eef3953cc2ed9568 176 PRINTS PR01576 Peptide deformylase signature 130 159 2.8E-35 T 28-03-2018 IPR023635 Peptide deformylase CJD35_RS09820 6be2b563b8e8afc5eef3953cc2ed9568 176 PRINTS PR01576 Peptide deformylase signature 99 110 2.8E-35 T 28-03-2018 IPR023635 Peptide deformylase CJD35_RS09820 6be2b563b8e8afc5eef3953cc2ed9568 176 PRINTS PR01576 Peptide deformylase signature 33 62 2.8E-35 T 28-03-2018 IPR023635 Peptide deformylase CJD35_RS09820 6be2b563b8e8afc5eef3953cc2ed9568 176 PRINTS PR01576 Peptide deformylase signature 111 129 2.8E-35 T 28-03-2018 IPR023635 Peptide deformylase CJD35_RS09820 6be2b563b8e8afc5eef3953cc2ed9568 176 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 169 1.2E-51 T 28-03-2018 IPR023635 Peptide deformylase CJD35_RS09820 6be2b563b8e8afc5eef3953cc2ed9568 176 Gene3D G3DSA:3.90.45.10 1 176 2.3E-64 T 28-03-2018 IPR023635 Peptide deformylase CJD35_RS09820 6be2b563b8e8afc5eef3953cc2ed9568 176 Hamap MF_00163 Peptide deformylase [def]. 2 172 31.952 T 28-03-2018 IPR023635 Peptide deformylase CJD35_RS07615 96b228987f39b0799fe7b8914af15644 298 Gene3D G3DSA:1.25.40.10 134 200 1.6E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS07615 96b228987f39b0799fe7b8914af15644 298 SUPERFAMILY SSF52833 10 112 1.73E-30 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS07615 96b228987f39b0799fe7b8914af15644 298 Gene3D G3DSA:3.40.30.10 6 133 2.5E-28 T 28-03-2018 CJD35_RS07615 96b228987f39b0799fe7b8914af15644 298 Gene3D G3DSA:1.25.40.10 201 297 1.3E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS07615 96b228987f39b0799fe7b8914af15644 298 SUPERFAMILY SSF48452 127 189 5.43E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS07615 96b228987f39b0799fe7b8914af15644 298 SUPERFAMILY SSF48452 225 271 5.43E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS07615 96b228987f39b0799fe7b8914af15644 298 Pfam PF00085 Thioredoxin 7 108 3.5E-25 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 CJD35_RS07615 96b228987f39b0799fe7b8914af15644 298 Pfam PF14561 Tetratricopeptide repeat 212 297 7.9E-30 T 28-03-2018 CJD35_RS07615 96b228987f39b0799fe7b8914af15644 298 Pfam PF14559 Tetratricopeptide repeat 137 203 7.9E-11 T 28-03-2018 CJD35_RS07615 96b228987f39b0799fe7b8914af15644 298 ProSitePatterns PS00194 Thioredoxin family active site. 26 44 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CJD35_RS01900 ffdb1ff2de4918ae5674d41b09bd5010 668 Pfam PF08706 D5 N terminal like 256 382 7.4E-18 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CJD35_RS01900 ffdb1ff2de4918ae5674d41b09bd5010 668 SMART SM00943 16 165 2.2E-43 T 28-03-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal CJD35_RS01900 ffdb1ff2de4918ae5674d41b09bd5010 668 SUPERFAMILY SSF56747 19 174 1.5E-29 T 28-03-2018 CJD35_RS01900 ffdb1ff2de4918ae5674d41b09bd5010 668 SMART SM00885 254 385 1.1E-29 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CJD35_RS01900 ffdb1ff2de4918ae5674d41b09bd5010 668 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 19 164 8.5E-34 T 28-03-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal CJD35_RS01900 ffdb1ff2de4918ae5674d41b09bd5010 668 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 336 632 3.1E-85 T 28-03-2018 IPR006500 DNA primase, phage/plasmid CJD35_RS01900 ffdb1ff2de4918ae5674d41b09bd5010 668 SUPERFAMILY SSF52540 410 539 1.05E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01900 ffdb1ff2de4918ae5674d41b09bd5010 668 Gene3D G3DSA:3.40.50.300 357 577 1.9E-12 T 28-03-2018 CJD35_RS13955 d95d7544f1b12423859b32c12ff44541 151 PIRSF PIRSF011386 2 150 1.9E-36 T 28-03-2018 IPR018037 Nitrogen fixation protein FixH, Proteobacterial CJD35_RS13955 d95d7544f1b12423859b32c12ff44541 151 Pfam PF05751 FixH 6 149 1.2E-31 T 28-03-2018 IPR008620 Nitrogen fixation protein FixH CJD35_RS12585 fca54adec0cc9fe274cee89ef780ac39 155 SUPERFAMILY SSF54637 4 154 3.6E-36 T 28-03-2018 IPR029069 HotDog domain CJD35_RS12585 fca54adec0cc9fe274cee89ef780ac39 155 Pfam PF01575 MaoC like domain 14 120 1.2E-16 T 28-03-2018 IPR002539 MaoC-like domain CJD35_RS12585 fca54adec0cc9fe274cee89ef780ac39 155 Gene3D G3DSA:3.10.129.10 1 155 3.6E-34 T 28-03-2018 CJD35_RS08560 4c6767aa6859733f2f9e9bea23192fe9 104 Gene3D G3DSA:3.30.70.330 11 104 3.6E-33 T 28-03-2018 CJD35_RS08560 4c6767aa6859733f2f9e9bea23192fe9 104 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 14 103 20.471 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CJD35_RS08560 4c6767aa6859733f2f9e9bea23192fe9 104 SUPERFAMILY SSF54189 12 101 4.32E-32 T 28-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08560 4c6767aa6859733f2f9e9bea23192fe9 104 ProSitePatterns PS00050 Ribosomal protein L23 signature. 86 101 - T 28-03-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08560 4c6767aa6859733f2f9e9bea23192fe9 104 Pfam PF00276 Ribosomal protein L23 15 100 1.0E-31 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CJD35_RS05480 37e5b4f932d3572433a24869e9633284 173 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 137 3.3E-19 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJD35_RS05480 37e5b4f932d3572433a24869e9633284 173 Gene3D G3DSA:3.40.50.2300 2 142 3.8E-36 T 28-03-2018 CJD35_RS05480 37e5b4f932d3572433a24869e9633284 173 SUPERFAMILY SSF52788 6 142 1.7E-38 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJD35_RS05480 37e5b4f932d3572433a24869e9633284 173 SMART SM00226 6 142 1.8E-34 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJD35_RS04705 c25aba7ce9e62886e32ffca5b6a23453 292 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 184 208 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS04705 c25aba7ce9e62886e32ffca5b6a23453 292 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 182 1.6E-58 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS04705 c25aba7ce9e62886e32ffca5b6a23453 292 PIRSF PIRSF000105 1 292 1.5E-80 T 28-03-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 CJD35_RS04705 c25aba7ce9e62886e32ffca5b6a23453 292 SUPERFAMILY SSF51735 1 184 3.94E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS04705 c25aba7ce9e62886e32ffca5b6a23453 292 Gene3D G3DSA:3.40.50.720 2 185 4.0E-51 T 28-03-2018 CJD35_RS04705 c25aba7ce9e62886e32ffca5b6a23453 292 Gene3D G3DSA:1.10.1040.10 186 288 8.2E-33 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS04705 c25aba7ce9e62886e32ffca5b6a23453 292 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 283 4.0E-32 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS04705 c25aba7ce9e62886e32ffca5b6a23453 292 SUPERFAMILY SSF48179 186 287 3.06E-34 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS15925 e0bb795feab0f1d5a87361e5720360cc 810 Gene3D G3DSA:2.170.130.10 32 174 2.6E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15925 e0bb795feab0f1d5a87361e5720360cc 810 Pfam PF00593 TonB dependent receptor 298 809 2.0E-33 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15925 e0bb795feab0f1d5a87361e5720360cc 810 Gene3D G3DSA:2.40.170.20 175 810 5.4E-63 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15925 e0bb795feab0f1d5a87361e5720360cc 810 SUPERFAMILY SSF56935 513 713 4.58E-101 T 28-03-2018 CJD35_RS15925 e0bb795feab0f1d5a87361e5720360cc 810 SUPERFAMILY SSF56935 36 471 4.58E-101 T 28-03-2018 CJD35_RS15925 e0bb795feab0f1d5a87361e5720360cc 810 SUPERFAMILY SSF56935 744 810 4.58E-101 T 28-03-2018 CJD35_RS15925 e0bb795feab0f1d5a87361e5720360cc 810 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 165 1.4E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 SUPERFAMILY SSF47794 359 420 6.59E-14 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 Gene3D G3DSA:2.40.50.140 135 204 4.2E-15 T 28-03-2018 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 SUPERFAMILY SSF50249 138 205 1.86E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 11 348 2.4E-122 T 28-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 371 419 5.5E-17 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 Pfam PF13184 NusA-like KH domain 236 304 2.3E-27 T 28-03-2018 IPR025249 KH domain, NusA-like GO:0003723 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 Pfam PF08529 NusA N-terminal domain 11 131 2.1E-30 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 SUPERFAMILY SSF69705 11 132 3.01E-34 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 Gene3D G3DSA:3.30.300.20 205 282 1.1E-33 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 SMART SM00316 140 206 2.9E-10 T 28-03-2018 IPR022967 RNA-binding domain, S1 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 Gene3D G3DSA:3.30.1480.10 9 132 2.6E-40 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 Gene3D G3DSA:3.30.300.20 284 354 3.6E-17 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 SUPERFAMILY SSF47794 435 518 8.79E-8 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 9 424 29.124 T 28-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 Gene3D G3DSA:1.10.150.20 361 427 8.5E-10 T 28-03-2018 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 Gene3D G3DSA:1.10.150.20 433 524 8.5E-20 T 28-03-2018 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 SUPERFAMILY SSF54814 207 284 7.19E-30 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 SUPERFAMILY SSF54814 285 348 4.51E-16 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 SMART SM00322 307 379 1.6E-5 T 28-03-2018 IPR004087 K Homology domain GO:0003676 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 SMART SM00322 236 299 12.0 T 28-03-2018 IPR004087 K Homology domain GO:0003676 CJD35_RS01265 065f085ba2705bedeead13ca902acb71 532 Pfam PF00575 S1 RNA binding domain 138 200 1.1E-7 T 28-03-2018 IPR003029 S1 domain GO:0003676 CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 Gene3D G3DSA:3.40.50.300 121 294 1.9E-21 T 28-03-2018 CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 23 465 28.347 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 26 464 1.1E-139 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 Pfam PF00308 Bacterial dnaA protein 131 347 1.0E-73 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 SUPERFAMILY SSF48295 362 465 4.71E-36 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 SUPERFAMILY SSF52540 130 343 1.52E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 375 443 3.1E-29 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 Gene3D G3DSA:1.10.1750.10 368 465 7.4E-34 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 Pfam PF11638 DnaA N-terminal domain 24 87 3.9E-9 T 28-03-2018 IPR024633 DnaA N-terminal domain CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 SMART SM00382 162 296 5.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 163 183 1.9E-40 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 261 288 1.9E-40 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 195 209 1.9E-40 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 227 241 1.9E-40 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 424 443 1.9E-40 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 SMART SM00760 374 443 1.5E-38 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 ProSitePatterns PS01008 DnaA protein signature. 424 443 - T 28-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CJD35_RS08875 426bb6909718c27788cb35ba518e784e 466 Gene3D G3DSA:1.10.8.60 296 367 1.5E-20 T 28-03-2018 CJD35_RS18255 65f017520a9fe63e44e3826baea57e2a 62 Pfam PF00563 EAL domain 2 49 3.6E-11 T 28-03-2018 IPR001633 EAL domain CJD35_RS18255 65f017520a9fe63e44e3826baea57e2a 62 SUPERFAMILY SSF141868 3 55 1.11E-13 T 28-03-2018 IPR001633 EAL domain CJD35_RS18255 65f017520a9fe63e44e3826baea57e2a 62 Gene3D G3DSA:3.20.20.450 1 62 2.0E-14 T 28-03-2018 IPR001633 EAL domain CJD35_RS21375 65f017520a9fe63e44e3826baea57e2a 62 Pfam PF00563 EAL domain 2 49 3.6E-11 T 28-03-2018 IPR001633 EAL domain CJD35_RS21375 65f017520a9fe63e44e3826baea57e2a 62 SUPERFAMILY SSF141868 3 55 1.11E-13 T 28-03-2018 IPR001633 EAL domain CJD35_RS21375 65f017520a9fe63e44e3826baea57e2a 62 Gene3D G3DSA:3.20.20.450 1 62 2.0E-14 T 28-03-2018 IPR001633 EAL domain CJD35_RS09320 6870039fae929c2d57346203fcfaf4bf 171 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 28-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS09320 6870039fae929c2d57346203fcfaf4bf 171 Pfam PF00466 Ribosomal protein L10 2 98 4.3E-21 T 28-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CJD35_RS09320 6870039fae929c2d57346203fcfaf4bf 171 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 22 140 9.0E-5 T 28-03-2018 CJD35_RS09320 6870039fae929c2d57346203fcfaf4bf 171 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 25.273 T 28-03-2018 IPR022973 Ribosomal protein L10 CJD35_RS09320 6870039fae929c2d57346203fcfaf4bf 171 SUPERFAMILY SSF160369 1 168 4.45E-54 T 28-03-2018 CJD35_RS11620 bccf9610a050eed1c88c58d30b125eb6 309 SUPERFAMILY SSF52402 2 183 5.44E-56 T 28-03-2018 CJD35_RS11620 bccf9610a050eed1c88c58d30b125eb6 309 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 272 2.1E-33 T 28-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CJD35_RS11620 bccf9610a050eed1c88c58d30b125eb6 309 SMART SM00893 3 181 1.4E-55 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CJD35_RS11620 bccf9610a050eed1c88c58d30b125eb6 309 SUPERFAMILY SSF52467 188 308 6.0E-45 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS11620 bccf9610a050eed1c88c58d30b125eb6 309 Pfam PF01012 Electron transfer flavoprotein domain 3 167 5.3E-42 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CJD35_RS11620 bccf9610a050eed1c88c58d30b125eb6 309 PIRSF PIRSF000089 1 309 6.3E-107 T 28-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CJD35_RS11620 bccf9610a050eed1c88c58d30b125eb6 309 Gene3D G3DSA:3.40.50.620 1 175 2.7E-44 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS11620 bccf9610a050eed1c88c58d30b125eb6 309 Gene3D G3DSA:3.40.50.1220 184 309 9.7E-57 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 SUPERFAMILY SSF55874 439 611 3.93E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Gene3D G3DSA:1.10.287.130 365 445 4.7E-6 T 28-03-2018 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Gene3D G3DSA:3.30.565.10 447 613 7.7E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 SMART SM00387 490 613 1.8E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 7 47 1.8E-7 T 28-03-2018 IPR022789 Antitoxin ParD CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Pfam PF00072 Response regulator receiver domain 634 744 1.1E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Pfam PF00072 Response regulator receiver domain 779 867 1.1E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Gene3D G3DSA:3.40.50.2300 631 767 6.3E-21 T 28-03-2018 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 492 611 4.5E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Pfam PF08448 PAS fold 223 331 4.6E-17 T 28-03-2018 IPR013656 PAS fold-4 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 7 47 2.6E-13 T 28-03-2018 IPR022789 Antitoxin ParD CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 SUPERFAMILY SSF52172 632 756 5.27E-23 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Gene3D G3DSA:3.30.450.20 210 357 1.2E-24 T 28-03-2018 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 SUPERFAMILY SSF52172 778 887 1.57E-21 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 591 1.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 570 1.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 556 1.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 PRINTS PR00344 Bacterial sensor protein C-terminal signature 597 610 1.2E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Gene3D G3DSA:3.30.450.20 82 209 8.5E-9 T 28-03-2018 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Gene3D G3DSA:3.40.50.2300 768 888 3.0E-20 T 28-03-2018 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 Gene3D G3DSA:1.10.1220.10 8 47 6.9E-9 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 SUPERFAMILY SSF47598 7 47 8.12E-7 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 SUPERFAMILY SSF47384 372 447 3.92E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 SUPERFAMILY SSF55785 202 326 8.03E-20 T 28-03-2018 IPR000014 PAS domain CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 SMART SM00448 632 745 3.5E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 SMART SM00448 776 884 4.4E-9 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 213 336 1.6E-9 T 28-03-2018 IPR000014 PAS domain CJD35_RS02745 8097223a90fc5140da228e01b193549f 905 SMART SM00388 383 449 0.0025 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 Gene3D G3DSA:3.30.413.10 651 822 9.8E-41 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 Gene3D G3DSA:3.50.50.60 21 152 6.8E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.3E-17 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 28 47 2.3E-17 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 301 2.3E-17 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 124 142 2.3E-17 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.3E-17 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PRINTS PR00397 Sirohaem Fe-binding site signature 699 717 2.0E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PRINTS PR00397 Sirohaem Fe-binding site signature 656 674 2.0E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 28 805 2.6E-281 T 28-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 SUPERFAMILY SSF51905 24 214 1.11E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 Gene3D G3DSA:3.90.480.10 301 648 2.4E-19 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 699 715 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 27 49 5.6E-8 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 5.6E-8 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 5.6E-8 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 294 301 5.6E-8 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 Pfam PF04324 BFD-like [2Fe-2S] binding domain 504 553 2.0E-11 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 Pfam PF04324 BFD-like [2Fe-2S] binding domain 443 490 5.7E-8 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 579 643 1.0E-13 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 SUPERFAMILY SSF51905 169 325 1.75E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 Gene3D G3DSA:3.40.50.720 153 300 2.2E-31 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 652 789 8.9E-27 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 PIRSF PIRSF037149 21 825 0.0 T 28-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 SUPERFAMILY SSF56014 653 815 1.14E-52 T 28-03-2018 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 SUPERFAMILY SSF55124 519 646 5.56E-25 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS17015 26477a9d53d371a4bc4c3d63105e0284 835 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 27 303 1.5E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16445 0e12c7d3f893db58d845e05ae6a63d37 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 1.6E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS16445 0e12c7d3f893db58d845e05ae6a63d37 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 1.6E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS16445 0e12c7d3f893db58d845e05ae6a63d37 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.6E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS16445 0e12c7d3f893db58d845e05ae6a63d37 147 Pfam PF12802 MarR family 33 90 2.3E-10 T 28-03-2018 CJD35_RS16445 0e12c7d3f893db58d845e05ae6a63d37 147 SUPERFAMILY SSF46785 10 137 2.93E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16445 0e12c7d3f893db58d845e05ae6a63d37 147 Gene3D G3DSA:1.10.10.10 1 138 4.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16445 0e12c7d3f893db58d845e05ae6a63d37 147 SMART SM00347 28 127 2.7E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS06475 62ab19cbb67c1da79427405619e84c3e 134 SUPERFAMILY SSF54292 31 118 4.19E-20 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS06475 62ab19cbb67c1da79427405619e84c3e 134 Gene3D G3DSA:3.10.20.30 30 125 3.3E-16 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS06475 62ab19cbb67c1da79427405619e84c3e 134 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 110 5.0E-11 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS06475 62ab19cbb67c1da79427405619e84c3e 134 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 66 74 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CJD35_RS07685 e0e37aaedcdd8ce8f99a860430d1fa76 223 Gene3D G3DSA:1.10.357.10 73 215 1.5E-29 T 28-03-2018 CJD35_RS07685 e0e37aaedcdd8ce8f99a860430d1fa76 223 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 70 1.6E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS07685 e0e37aaedcdd8ce8f99a860430d1fa76 223 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 156 210 4.0E-6 T 28-03-2018 CJD35_RS07685 e0e37aaedcdd8ce8f99a860430d1fa76 223 SUPERFAMILY SSF48498 95 209 2.34E-11 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS07685 e0e37aaedcdd8ce8f99a860430d1fa76 223 Gene3D G3DSA:1.10.260.40 46 72 6.9E-14 T 28-03-2018 CJD35_RS07685 e0e37aaedcdd8ce8f99a860430d1fa76 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 24 37 6.1E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS07685 e0e37aaedcdd8ce8f99a860430d1fa76 223 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 45 68 6.1E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS07685 e0e37aaedcdd8ce8f99a860430d1fa76 223 SUPERFAMILY SSF46689 10 88 6.67E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS07685 e0e37aaedcdd8ce8f99a860430d1fa76 223 Gene3D G3DSA:1.10.10.60 2 45 1.4E-13 T 28-03-2018 CJD35_RS13415 bb3f370181b6e14c6cf0ddccce82ec24 133 SUPERFAMILY SSF54637 14 130 4.68E-38 T 28-03-2018 IPR029069 HotDog domain CJD35_RS13415 bb3f370181b6e14c6cf0ddccce82ec24 133 Pfam PF03061 Thioesterase superfamily 27 99 1.1E-18 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CJD35_RS13415 bb3f370181b6e14c6cf0ddccce82ec24 133 Gene3D G3DSA:3.10.129.10 9 133 7.8E-37 T 28-03-2018 CJD35_RS21870 4e67d83e84e065b4e07214e34e56028c 107 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 3 86 5.0E-20 T 28-03-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB CJD35_RS10240 d590ef8c60e2594ef0cac2888aab1916 60 SUPERFAMILY SSF69047 6 55 6.02E-9 T 28-03-2018 IPR008462 CsbD-like domain CJD35_RS10240 d590ef8c60e2594ef0cac2888aab1916 60 Gene3D G3DSA:1.10.1470.10 4 60 2.2E-13 T 28-03-2018 IPR008462 CsbD-like domain CJD35_RS10240 d590ef8c60e2594ef0cac2888aab1916 60 Pfam PF05532 CsbD-like 6 56 1.3E-15 T 28-03-2018 IPR008462 CsbD-like domain CJD35_RS19205 9422361f9a21da66f3a9c99e74d7bc31 304 SUPERFAMILY SSF56349 4 292 3.53E-33 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS19205 9422361f9a21da66f3a9c99e74d7bc31 304 Pfam PF00589 Phage integrase family 102 283 7.6E-17 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19205 9422361f9a21da66f3a9c99e74d7bc31 304 Gene3D G3DSA:1.10.443.10 100 293 5.3E-27 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20400 9422361f9a21da66f3a9c99e74d7bc31 304 SUPERFAMILY SSF56349 4 292 3.53E-33 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS20400 9422361f9a21da66f3a9c99e74d7bc31 304 Pfam PF00589 Phage integrase family 102 283 7.6E-17 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20400 9422361f9a21da66f3a9c99e74d7bc31 304 Gene3D G3DSA:1.10.443.10 100 293 5.3E-27 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS05750 02e539a089a0fd858bdf588a37b75676 219 Gene3D G3DSA:3.60.21.10 26 194 3.8E-8 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS05750 02e539a089a0fd858bdf588a37b75676 219 SUPERFAMILY SSF56300 27 162 5.36E-12 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS05750 02e539a089a0fd858bdf588a37b75676 219 TIGRFAM TIGR04123 P_estr_lig_assc: metallophosphoesterase, DNA ligase-associated 5 198 2.5E-60 T 28-03-2018 IPR026336 Metallophosphoesterase, DNA ligase-associated CJD35_RS05750 02e539a089a0fd858bdf588a37b75676 219 PIRSF PIRSF000887 4 213 9.5E-41 T 28-03-2018 IPR024173 Phosphoesterase, MJ0037 CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 PIRSF PIRSF002583 3 628 1.1E-187 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 624 28.725 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 126 148 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 31 53 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 80 97 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 179 196 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 197 215 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 10 30 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 98 115 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 SUPERFAMILY SSF110942 510 624 1.7E-30 T 28-03-2018 CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 SMART SM00387 32 191 6.0E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 28-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 SUPERFAMILY SSF55874 10 219 8.31E-60 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 154 9.5E-11 T 28-03-2018 CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 Pfam PF00183 Hsp90 protein 225 624 4.9E-101 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 SUPERFAMILY SSF54211 232 483 4.93E-83 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS20720 f5633cfbba0e296b439d5b3d653f7eca 630 Gene3D G3DSA:3.30.565.10 34 229 2.8E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 PIRSF PIRSF002583 3 628 1.1E-187 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 624 28.725 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 126 148 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 31 53 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 80 97 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 179 196 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 197 215 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 10 30 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 PRINTS PR00775 90kDa heat shock protein signature 98 115 1.7E-54 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 SUPERFAMILY SSF110942 510 624 1.7E-30 T 28-03-2018 CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 SMART SM00387 32 191 6.0E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 28-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 SUPERFAMILY SSF55874 10 219 8.31E-60 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 154 9.5E-11 T 28-03-2018 CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 Pfam PF00183 Hsp90 protein 225 624 4.9E-101 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 SUPERFAMILY SSF54211 232 483 4.93E-83 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS18490 f5633cfbba0e296b439d5b3d653f7eca 630 Gene3D G3DSA:3.30.565.10 34 229 2.8E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS08430 6beb6c34691f0cd8b93c01ce26abec13 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 2.7E-64 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CJD35_RS08430 6beb6c34691f0cd8b93c01ce26abec13 195 Gene3D G3DSA:3.30.230.40 2 88 5.9E-32 T 28-03-2018 CJD35_RS08430 6beb6c34691f0cd8b93c01ce26abec13 195 SUPERFAMILY SSF54211 87 179 2.02E-37 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS08430 6beb6c34691f0cd8b93c01ce26abec13 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CJD35_RS08430 6beb6c34691f0cd8b93c01ce26abec13 195 Gene3D G3DSA:3.30.230.40 90 195 1.0E-37 T 28-03-2018 CJD35_RS08430 6beb6c34691f0cd8b93c01ce26abec13 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CJD35_RS08430 6beb6c34691f0cd8b93c01ce26abec13 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 42.614 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CJD35_RS08430 6beb6c34691f0cd8b93c01ce26abec13 195 SUPERFAMILY SSF54211 1 86 1.64E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 Hamap MF_00204 UvrABC system protein B [uvrB]. 33 689 40.913 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 Pfam PF02151 UvrB/uvrC motif 656 688 3.1E-8 T 28-03-2018 IPR001943 UVR domain GO:0005515 CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 SUPERFAMILY SSF52540 34 442 4.0E-125 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 Gene3D G3DSA:3.40.50.300 41 443 1.0E-29 T 28-03-2018 CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 Gene3D G3DSA:3.40.50.300 445 619 6.3E-31 T 28-03-2018 CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 SUPERFAMILY SSF46600 647 688 5.36E-11 T 28-03-2018 IPR001943 UVR domain GO:0005515 CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 Pfam PF00271 Helicase conserved C-terminal domain 464 574 5.9E-17 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 SUPERFAMILY SSF52540 489 606 8.57E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 SUPERFAMILY SSF52540 63 112 8.57E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 SMART SM00487 39 456 1.3E-25 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 SMART SM00490 490 576 1.2E-17 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 35 686 1.5E-298 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 Pfam PF12344 Ultra-violet resistance protein B 582 623 4.4E-22 T 28-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 Gene3D G3DSA:4.10.860.10 621 692 6.7E-14 T 28-03-2018 IPR001943 UVR domain GO:0005515 CJD35_RS03570 7dc8e7af9f2f6542c96c74b34acf801e 727 Pfam PF04851 Type III restriction enzyme, res subunit 46 169 2.0E-10 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CJD35_RS20430 63d35392774f0849bcb252dbd094bd04 710 Pfam PF13872 P-loop containing NTP hydrolase pore-1 385 703 5.6E-112 T 28-03-2018 CJD35_RS20430 63d35392774f0849bcb252dbd094bd04 710 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 129 143 2.3E-7 T 28-03-2018 CJD35_RS20430 63d35392774f0849bcb252dbd094bd04 710 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 209 233 2.3E-7 T 28-03-2018 CJD35_RS20430 63d35392774f0849bcb252dbd094bd04 710 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 105 121 2.3E-7 T 28-03-2018 CJD35_RS20430 63d35392774f0849bcb252dbd094bd04 710 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 189 201 2.3E-7 T 28-03-2018 CJD35_RS20430 63d35392774f0849bcb252dbd094bd04 710 Gene3D G3DSA:3.40.50.150 92 276 2.9E-10 T 28-03-2018 CJD35_RS20430 63d35392774f0849bcb252dbd094bd04 710 Pfam PF05175 Methyltransferase small domain 118 248 1.5E-4 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CJD35_RS20430 63d35392774f0849bcb252dbd094bd04 710 SUPERFAMILY SSF52540 460 659 1.33E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20430 63d35392774f0849bcb252dbd094bd04 710 SUPERFAMILY SSF53335 107 285 1.13E-15 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS20430 63d35392774f0849bcb252dbd094bd04 710 Gene3D G3DSA:3.40.50.300 288 632 3.4E-9 T 28-03-2018 CJD35_RS06990 0bc811d3c86f2cb9a027b2e8536fb074 410 SUPERFAMILY SSF53383 40 401 4.21E-93 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS06990 0bc811d3c86f2cb9a027b2e8536fb074 410 Gene3D G3DSA:3.90.1150.10 273 406 8.5E-34 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS06990 0bc811d3c86f2cb9a027b2e8536fb074 410 Gene3D G3DSA:3.40.640.10 12 272 2.7E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS06990 0bc811d3c86f2cb9a027b2e8536fb074 410 PIRSF PIRSF001434 2 404 7.9E-113 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CJD35_RS06990 0bc811d3c86f2cb9a027b2e8536fb074 410 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 36 400 4.5E-96 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CJD35_RS06990 0bc811d3c86f2cb9a027b2e8536fb074 410 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 215 229 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CJD35_RS06990 0bc811d3c86f2cb9a027b2e8536fb074 410 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 33 402 2.3E-143 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 SUPERFAMILY SSF52540 469 629 5.74E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 Gene3D G3DSA:3.40.50.300 65 335 3.8E-38 T 28-03-2018 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 Gene3D G3DSA:3.40.50.300 338 467 0.015 T 28-03-2018 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 ProSitePatterns PS01312 SecA family signature. 553 568 - T 28-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 SUPERFAMILY SSF81767 302 417 6.41E-28 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 Pfam PF07517 SecA DEAD-like domain 74 453 1.4E-95 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 Gene3D G3DSA:3.40.50.300 468 678 4.5E-31 T 28-03-2018 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 SMART SM00958 296 409 2.7E-23 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 Hamap MF_01382 Protein translocase subunit SecA [secA]. 56 682 11.977 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 PRINTS PR00906 SecA protein signature 167 177 6.7E-47 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 PRINTS PR00906 SecA protein signature 464 477 6.7E-47 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 PRINTS PR00906 SecA protein signature 113 137 6.7E-47 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 PRINTS PR00906 SecA protein signature 427 444 6.7E-47 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 PRINTS PR00906 SecA protein signature 151 165 6.7E-47 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 PRINTS PR00906 SecA protein signature 220 240 6.7E-47 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 PRINTS PR00906 SecA protein signature 390 412 6.7E-47 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 SMART SM00957 57 453 4.9E-133 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 Pfam PF01043 SecA preprotein cross-linking domain 303 409 1.7E-22 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 SUPERFAMILY SSF52540 72 295 9.54E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12075 229255f9b789360cfff850bb284a4881 683 SUPERFAMILY SSF52540 419 465 9.54E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.1E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.1E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.1E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 SUPERFAMILY SSF51735 8 246 9.23E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 244 2.8E-53 T 28-03-2018 CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 Gene3D G3DSA:3.40.50.720 2 50 1.7E-10 T 28-03-2018 CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 Gene3D G3DSA:3.40.50.720 51 248 1.4E-46 T 28-03-2018 CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.0E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.0E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.0E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.0E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.0E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06880 eef483b651e0ffbd941ba5d5f5c9cf7e 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.0E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS05565 8ee1a0cbe17e0e78974e66ffb74b2bc3 336 SUPERFAMILY SSF75005 38 313 4.0E-27 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CJD35_RS05565 8ee1a0cbe17e0e78974e66ffb74b2bc3 336 Gene3D G3DSA:2.115.10.20 2 324 4.4E-52 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CJD35_RS05565 8ee1a0cbe17e0e78974e66ffb74b2bc3 336 Pfam PF03664 Glycosyl hydrolase family 62 13 292 2.0E-56 T 28-03-2018 IPR005193 Glycoside hydrolase, family 62, arabinosidase GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 CJD35_RS17420 084fc26ce093fde26a9717fecca6a95c 146 Gene3D G3DSA:1.10.3330.10 1 146 8.7E-44 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CJD35_RS17420 084fc26ce093fde26a9717fecca6a95c 146 SUPERFAMILY SSF158694 2 145 5.62E-42 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CJD35_RS17420 084fc26ce093fde26a9717fecca6a95c 146 Pfam PF09349 OHCU decarboxylase 1 143 1.1E-36 T 28-03-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CJD35_RS17420 084fc26ce093fde26a9717fecca6a95c 146 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 2 145 7.3E-52 T 28-03-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CJD35_RS00110 12ba70ee57c9f41bf905b41778017e49 52 Pfam PF04325 Protein of unknown function (DUF465) 8 50 5.5E-12 T 28-03-2018 IPR007420 Protein of unknown function DUF465 CJD35_RS17045 8518eaeebd88c777001a4318e1fcc124 306 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 251 7.9E-48 T 28-03-2018 CJD35_RS17045 8518eaeebd88c777001a4318e1fcc124 306 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 12 297 47.054 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CJD35_RS17045 8518eaeebd88c777001a4318e1fcc124 306 SUPERFAMILY SSF51621 9 295 5.38E-92 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJD35_RS17045 8518eaeebd88c777001a4318e1fcc124 306 Gene3D G3DSA:3.20.20.60 6 303 3.8E-82 T 28-03-2018 CJD35_RS17045 8518eaeebd88c777001a4318e1fcc124 306 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 15 296 3.0E-126 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CJD35_RS17045 8518eaeebd88c777001a4318e1fcc124 306 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 CJD35_RS11130 fc5e416fd522a8c345de3bb3fa2d0526 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 303 2.2E-29 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain CJD35_RS11130 fc5e416fd522a8c345de3bb3fa2d0526 311 PIRSF PIRSF000446 1 311 4.4E-86 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CJD35_RS11130 fc5e416fd522a8c345de3bb3fa2d0526 311 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 2 292 1.5E-87 T 28-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CJD35_RS11130 fc5e416fd522a8c345de3bb3fa2d0526 311 Gene3D G3DSA:3.40.366.10 184 310 2.8E-27 T 28-03-2018 CJD35_RS11130 fc5e416fd522a8c345de3bb3fa2d0526 311 Gene3D G3DSA:3.40.366.10 2 183 4.7E-45 T 28-03-2018 CJD35_RS11130 fc5e416fd522a8c345de3bb3fa2d0526 311 SUPERFAMILY SSF55048 130 199 8.63E-17 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CJD35_RS11130 fc5e416fd522a8c345de3bb3fa2d0526 311 SUPERFAMILY SSF52151 194 309 2.38E-67 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CJD35_RS11130 fc5e416fd522a8c345de3bb3fa2d0526 311 SUPERFAMILY SSF52151 1 124 2.38E-67 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CJD35_RS11130 fc5e416fd522a8c345de3bb3fa2d0526 311 Pfam PF00698 Acyl transferase domain 4 276 2.8E-32 T 28-03-2018 IPR014043 Acyl transferase CJD35_RS02580 d8010aefdf452e06d654e4a9f51e5308 228 SMART SM00702 38 219 3.3E-30 T 28-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CJD35_RS02580 d8010aefdf452e06d654e4a9f51e5308 228 Gene3D G3DSA:2.60.120.620 28 224 1.9E-36 T 28-03-2018 CJD35_RS02580 d8010aefdf452e06d654e4a9f51e5308 228 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 116 219 1.5E-15 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CJD35_RS06360 bb259c99a25c4f520a3da9a4b42a5598 513 Gene3D G3DSA:3.30.300.30 410 513 1.1E-26 T 28-03-2018 CJD35_RS06360 bb259c99a25c4f520a3da9a4b42a5598 513 SUPERFAMILY SSF56801 6 511 1.7E-137 T 28-03-2018 CJD35_RS06360 bb259c99a25c4f520a3da9a4b42a5598 513 Gene3D G3DSA:3.40.50.980 3 168 7.4E-33 T 28-03-2018 CJD35_RS06360 bb259c99a25c4f520a3da9a4b42a5598 513 Gene3D G3DSA:3.40.50.980 169 323 1.7E-42 T 28-03-2018 CJD35_RS06360 bb259c99a25c4f520a3da9a4b42a5598 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 499 4.0E-16 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CJD35_RS06360 bb259c99a25c4f520a3da9a4b42a5598 513 Gene3D G3DSA:2.30.38.10 324 408 6.3E-24 T 28-03-2018 CJD35_RS06360 bb259c99a25c4f520a3da9a4b42a5598 513 Pfam PF00501 AMP-binding enzyme 10 415 5.8E-92 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJD35_RS10695 df463d1357880c66c0ae48c43ccf8f77 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 4.0E-13 T 28-03-2018 CJD35_RS10695 df463d1357880c66c0ae48c43ccf8f77 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 29.774 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CJD35_RS10695 df463d1357880c66c0ae48c43ccf8f77 143 Gene3D G3DSA:3.30.1550.10 3 72 5.9E-35 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal CJD35_RS10695 df463d1357880c66c0ae48c43ccf8f77 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.3E-20 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CJD35_RS10695 df463d1357880c66c0ae48c43ccf8f77 143 SUPERFAMILY SSF46906 68 140 1.03E-23 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CJD35_RS10695 df463d1357880c66c0ae48c43ccf8f77 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 7.0E-63 T 28-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS10695 df463d1357880c66c0ae48c43ccf8f77 143 SUPERFAMILY SSF54747 3 72 3.92E-29 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal CJD35_RS10695 df463d1357880c66c0ae48c43ccf8f77 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.7E-28 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal CJD35_RS10695 df463d1357880c66c0ae48c43ccf8f77 143 Gene3D G3DSA:1.10.10.250 73 140 1.3E-18 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CJD35_RS10695 df463d1357880c66c0ae48c43ccf8f77 143 SMART SM00649 9 141 1.3E-77 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CJD35_RS07285 e7f18dfa7e42678f45358d46065cb437 496 Pfam PF01593 Flavin containing amine oxidoreductase 13 489 1.5E-47 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CJD35_RS07285 e7f18dfa7e42678f45358d46065cb437 496 SUPERFAMILY SSF51905 3 318 1.84E-70 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS07285 e7f18dfa7e42678f45358d46065cb437 496 SUPERFAMILY SSF51905 450 492 1.84E-70 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS07285 e7f18dfa7e42678f45358d46065cb437 496 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 5 493 7.7E-208 T 28-03-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 CJD35_RS07285 e7f18dfa7e42678f45358d46065cb437 496 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 460 480 - T 28-03-2018 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site CJD35_RS07285 e7f18dfa7e42678f45358d46065cb437 496 Gene3D G3DSA:3.50.50.60 2 495 2.1E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05465 e1b5465244e65eaef0dc31f021bd2405 253 Gene3D G3DSA:3.40.50.360 35 233 1.6E-42 T 28-03-2018 IPR029039 Flavoprotein-like domain CJD35_RS05465 e1b5465244e65eaef0dc31f021bd2405 253 Pfam PF03358 NADPH-dependent FMN reductase 41 185 2.3E-25 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CJD35_RS05465 e1b5465244e65eaef0dc31f021bd2405 253 SUPERFAMILY SSF52218 11 235 1.2E-61 T 28-03-2018 IPR029039 Flavoprotein-like domain CJD35_RS05465 e1b5465244e65eaef0dc31f021bd2405 253 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 34 234 1.5E-115 T 28-03-2018 IPR014063 Arsenate resistance ArsH CJD35_RS13045 6e182aad4b8a6422c9439492cce46064 742 Gene3D G3DSA:2.140.10.30 24 471 4.8E-91 T 28-03-2018 CJD35_RS13045 6e182aad4b8a6422c9439492cce46064 742 Gene3D G3DSA:3.40.50.1820 480 741 1.8E-44 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS13045 6e182aad4b8a6422c9439492cce46064 742 Pfam PF00326 Prolyl oligopeptidase family 539 732 1.4E-53 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CJD35_RS13045 6e182aad4b8a6422c9439492cce46064 742 SUPERFAMILY SSF53474 486 732 4.63E-69 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS13045 6e182aad4b8a6422c9439492cce46064 742 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 160 449 2.1E-77 T 28-03-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 CJD35_RS13045 6e182aad4b8a6422c9439492cce46064 742 SUPERFAMILY SSF82171 26 468 1.96E-55 T 28-03-2018 CJD35_RS07990 1db12838dba8f6267b80c54a19cb3cb9 573 ProSitePatterns PS00523 Sulfatases signature 1. 90 102 - T 28-03-2018 IPR024607 Sulfatase, conserved site CJD35_RS07990 1db12838dba8f6267b80c54a19cb3cb9 573 Pfam PF00884 Sulfatase 45 387 4.0E-69 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CJD35_RS07990 1db12838dba8f6267b80c54a19cb3cb9 573 Gene3D G3DSA:3.30.1120.10 418 505 1.2E-12 T 28-03-2018 CJD35_RS07990 1db12838dba8f6267b80c54a19cb3cb9 573 SUPERFAMILY SSF53649 43 489 4.22E-115 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJD35_RS07990 1db12838dba8f6267b80c54a19cb3cb9 573 Gene3D G3DSA:3.40.720.10 41 344 1.7E-82 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJD35_RS07990 1db12838dba8f6267b80c54a19cb3cb9 573 Gene3D G3DSA:3.40.720.10 345 411 1.3E-13 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJD35_RS07990 1db12838dba8f6267b80c54a19cb3cb9 573 ProSitePatterns PS00149 Sulfatases signature 2. 132 142 - T 28-03-2018 IPR024607 Sulfatase, conserved site CJD35_RS07990 1db12838dba8f6267b80c54a19cb3cb9 573 Pfam PF16347 Domain of unknown function (DUF4976) 390 487 1.1E-15 T 28-03-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096 CJD35_RS14555 bc30718a33a778f1e9513dcbf4e4b8eb 111 Gene3D G3DSA:3.10.20.30 1 111 9.9E-31 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS14555 bc30718a33a778f1e9513dcbf4e4b8eb 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 40 50 - T 28-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS14555 bc30718a33a778f1e9513dcbf4e4b8eb 111 PRINTS PR00355 Adrenodoxin signature 82 90 1.0E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS14555 bc30718a33a778f1e9513dcbf4e4b8eb 111 PRINTS PR00355 Adrenodoxin signature 40 50 1.0E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS14555 bc30718a33a778f1e9513dcbf4e4b8eb 111 PRINTS PR00355 Adrenodoxin signature 59 73 1.0E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS14555 bc30718a33a778f1e9513dcbf4e4b8eb 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 89 1.9E-12 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS14555 bc30718a33a778f1e9513dcbf4e4b8eb 111 SUPERFAMILY SSF54292 1 102 3.37E-25 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS08820 1ff534e585d27f1e9bcaa9ea79dfb76d 121 Gene3D G3DSA:3.40.1260.10 1 120 2.1E-16 T 28-03-2018 CJD35_RS08820 1ff534e585d27f1e9bcaa9ea79dfb76d 121 SUPERFAMILY SSF75169 1 119 1.85E-15 T 28-03-2018 IPR027396 DsrEFH-like CJD35_RS08820 1ff534e585d27f1e9bcaa9ea79dfb76d 121 Pfam PF02635 DsrE/DsrF-like family 6 118 7.4E-8 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CJD35_RS06060 d4d9bded6883bade1d921b4a5fdb9679 252 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 2.4E-100 T 28-03-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 CJD35_RS06060 d4d9bded6883bade1d921b4a5fdb9679 252 SUPERFAMILY SSF52540 2 232 5.18E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06060 d4d9bded6883bade1d921b4a5fdb9679 252 Gene3D G3DSA:3.40.50.300 1 250 3.7E-40 T 28-03-2018 CJD35_RS06060 d4d9bded6883bade1d921b4a5fdb9679 252 Pfam PF00005 ABC transporter 17 172 2.5E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS19250 db108e6c89bdf3be7925085bfc4aeb46 277 Gene3D G3DSA:3.90.550.10 2 244 4.2E-32 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS19250 db108e6c89bdf3be7925085bfc4aeb46 277 SUPERFAMILY SSF53448 150 245 1.59E-36 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS19250 db108e6c89bdf3be7925085bfc4aeb46 277 SUPERFAMILY SSF53448 2 116 1.59E-36 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS19250 db108e6c89bdf3be7925085bfc4aeb46 277 Pfam PF00535 Glycosyl transferase family 2 4 168 2.2E-12 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS17500 2e5d85370d821f8e60c055a3fd04be0c 840 Pfam PF07631 Protein of unknown function (DUF1592) 502 629 8.3E-46 T 28-03-2018 IPR013042 Domain of unknown function DUF1592 CJD35_RS17500 2e5d85370d821f8e60c055a3fd04be0c 840 Gene3D G3DSA:1.10.760.10 58 155 0.023 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS17500 2e5d85370d821f8e60c055a3fd04be0c 840 Pfam PF07624 Protein of unknown function (DUF1585) 759 832 8.9E-24 T 28-03-2018 IPR011478 Domain of unknown function DUF1585 CJD35_RS17500 2e5d85370d821f8e60c055a3fd04be0c 840 Pfam PF07637 Protein of unknown function (DUF1595) 428 488 5.8E-23 T 28-03-2018 IPR013043 Domain of unknown function DUF1595 CJD35_RS17500 2e5d85370d821f8e60c055a3fd04be0c 840 Pfam PF07627 Protein of unknown function (DUF1588) 648 746 5.0E-34 T 28-03-2018 IPR013039 Domain of unknown function DUF1588 CJD35_RS17500 2e5d85370d821f8e60c055a3fd04be0c 840 Pfam PF07626 Protein of unknown function (DUF1587) 169 231 3.6E-24 T 28-03-2018 IPR013036 Domain of unknown function DUF1587 CJD35_RS00120 491736091241c5dcc485fb5e64bace0a 154 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 30 152 27.621 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CJD35_RS00120 491736091241c5dcc485fb5e64bace0a 154 SUPERFAMILY SSF109635 18 112 3.01E-33 T 28-03-2018 CJD35_RS00120 491736091241c5dcc485fb5e64bace0a 154 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 34 143 8.0E-42 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CJD35_RS00120 491736091241c5dcc485fb5e64bace0a 154 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 111 146 2.5E-11 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CJD35_RS00120 491736091241c5dcc485fb5e64bace0a 154 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 116 140 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CJD35_RS00120 491736091241c5dcc485fb5e64bace0a 154 SUPERFAMILY SSF57716 113 150 3.14E-8 T 28-03-2018 CJD35_RS17425 3cb9023127b7f8621853cd660bb6b177 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 59 6.5E-5 T 28-03-2018 CJD35_RS17425 3cb9023127b7f8621853cd660bb6b177 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 217 242 6.5E-5 T 28-03-2018 CJD35_RS17425 3cb9023127b7f8621853cd660bb6b177 472 Gene3D G3DSA:3.50.50.60 34 203 1.7E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17425 3cb9023127b7f8621853cd660bb6b177 472 Gene3D G3DSA:3.50.50.60 204 438 3.7E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17425 3cb9023127b7f8621853cd660bb6b177 472 SUPERFAMILY SSF51905 37 352 5.53E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17425 3cb9023127b7f8621853cd660bb6b177 472 Pfam PF13454 FAD-NAD(P)-binding 40 180 5.0E-12 T 28-03-2018 CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 Gene3D G3DSA:1.10.1040.10 593 688 1.9E-18 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 Gene3D G3DSA:1.10.1040.10 479 567 1.6E-14 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 194 1.4E-39 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 SUPERFAMILY SSF48179 595 685 6.21E-23 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 300 474 2.4E-60 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 Gene3D G3DSA:3.90.226.10 2 252 5.1E-56 T 28-03-2018 CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 SUPERFAMILY SSF51735 297 474 2.66E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 Gene3D G3DSA:3.40.50.720 253 478 5.1E-56 T 28-03-2018 CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 92 112 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 SUPERFAMILY SSF52096 8 288 2.89E-64 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 598 681 7.4E-6 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 480 562 9.3E-14 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS06825 da599f092d1f55287bc66f1b64823962 688 SUPERFAMILY SSF48179 479 569 3.4E-19 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.5E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.5E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.5E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.5E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.5E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.5E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 247 2.3E-67 T 28-03-2018 CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 SUPERFAMILY SSF51735 5 248 6.48E-82 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 Gene3D G3DSA:3.40.50.720 48 249 1.4E-59 T 28-03-2018 CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 Gene3D G3DSA:3.40.50.720 1 47 9.3E-11 T 28-03-2018 CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.5E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.5E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06315 223e96de232e4aba981182e4fa414692 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.5E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS00605 32fad7851ed9fd881ec8b4b66bba3adf 460 SUPERFAMILY SSF52540 73 361 5.76E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS00605 32fad7851ed9fd881ec8b4b66bba3adf 460 SMART SM00487 20 222 1.6E-60 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS00605 32fad7851ed9fd881ec8b4b66bba3adf 460 Pfam PF00270 DEAD/DEAH box helicase 25 195 4.6E-46 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJD35_RS00605 32fad7851ed9fd881ec8b4b66bba3adf 460 SMART SM00490 258 339 1.1E-32 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS00605 32fad7851ed9fd881ec8b4b66bba3adf 460 Gene3D G3DSA:3.40.50.300 226 454 9.0E-46 T 28-03-2018 CJD35_RS00605 32fad7851ed9fd881ec8b4b66bba3adf 460 Gene3D G3DSA:3.40.50.300 1 225 4.4E-59 T 28-03-2018 CJD35_RS00605 32fad7851ed9fd881ec8b4b66bba3adf 460 Pfam PF00271 Helicase conserved C-terminal domain 233 339 8.8E-29 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS14870 fea57d2f21ef78c48568e5cbfc6cd148 150 Gene3D G3DSA:1.10.1510.10 1 93 1.1E-27 T 28-03-2018 CJD35_RS14870 fea57d2f21ef78c48568e5cbfc6cd148 150 Gene3D G3DSA:1.10.10.410 94 150 3.2E-12 T 28-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CJD35_RS14870 fea57d2f21ef78c48568e5cbfc6cd148 150 SUPERFAMILY SSF89095 2 150 5.23E-35 T 28-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CJD35_RS14870 fea57d2f21ef78c48568e5cbfc6cd148 150 Pfam PF09424 Yqey-like protein 4 149 2.8E-43 T 28-03-2018 IPR019004 Uncharacterised domain YOR215C, mitochondrial CJD35_RS14630 abb8e48bd4d16f145894f08716e599fa 628 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 14 91 2.6E-13 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CJD35_RS14630 abb8e48bd4d16f145894f08716e599fa 628 SUPERFAMILY SSF51011 557 607 5.9E-5 T 28-03-2018 CJD35_RS14630 abb8e48bd4d16f145894f08716e599fa 628 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 13 586 2.0E-224 T 28-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 CJD35_RS14630 abb8e48bd4d16f145894f08716e599fa 628 Pfam PF00128 Alpha amylase, catalytic domain 177 274 8.0E-5 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CJD35_RS14630 abb8e48bd4d16f145894f08716e599fa 628 SUPERFAMILY SSF81296 11 127 4.0E-32 T 28-03-2018 IPR014756 Immunoglobulin E-set CJD35_RS14630 abb8e48bd4d16f145894f08716e599fa 628 SUPERFAMILY SSF51445 477 549 3.26E-108 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CJD35_RS14630 abb8e48bd4d16f145894f08716e599fa 628 SUPERFAMILY SSF51445 133 448 3.26E-108 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CJD35_RS14630 abb8e48bd4d16f145894f08716e599fa 628 Gene3D G3DSA:2.60.40.1180 557 617 8.1E-8 T 28-03-2018 CJD35_RS14630 abb8e48bd4d16f145894f08716e599fa 628 Gene3D G3DSA:2.60.40.10 7 125 1.6E-32 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS14630 abb8e48bd4d16f145894f08716e599fa 628 Gene3D G3DSA:3.20.20.80 131 556 3.1E-92 T 28-03-2018 CJD35_RS14630 abb8e48bd4d16f145894f08716e599fa 628 SMART SM00642 145 545 5.3E-5 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CJD35_RS04550 b6cded327d0fbfd1b51c736826f36ad3 294 Pfam PF06719 AraC-type transcriptional regulator N-terminus 21 169 2.1E-47 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CJD35_RS04550 b6cded327d0fbfd1b51c736826f36ad3 294 SUPERFAMILY SSF46689 234 279 6.81E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS04550 b6cded327d0fbfd1b51c736826f36ad3 294 SUPERFAMILY SSF46689 182 232 5.44E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS04550 b6cded327d0fbfd1b51c736826f36ad3 294 Pfam PF12833 Helix-turn-helix domain 204 279 1.9E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS04550 b6cded327d0fbfd1b51c736826f36ad3 294 SMART SM00342 198 281 2.4E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS04550 b6cded327d0fbfd1b51c736826f36ad3 294 Gene3D G3DSA:1.10.10.60 238 290 1.2E-9 T 28-03-2018 CJD35_RS04550 b6cded327d0fbfd1b51c736826f36ad3 294 Gene3D G3DSA:1.10.10.60 180 237 5.0E-16 T 28-03-2018 CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 Gene3D G3DSA:1.10.287.130 498 571 4.8E-11 T 28-03-2018 CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 616 725 8.9E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 Gene3D G3DSA:3.30.565.10 572 729 1.6E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 SMART SM00304 332 385 8.4E-15 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 SUPERFAMILY SSF158472 333 382 4.97E-11 T 28-03-2018 CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 689 707 7.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 675 7.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 688 7.1E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 SMART SM00388 504 575 1.9E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 Pfam PF00672 HAMP domain 333 381 1.1E-14 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 Pfam PF00512 His Kinase A (phospho-acceptor) domain 506 572 7.4E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 PIRSF PIRSF037532 15 732 9.3E-210 T 28-03-2018 IPR017232 Signal transduction histidine kinase, nitrogen fixation and metabolism regulator CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 SUPERFAMILY SSF47384 500 573 7.85E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 SUPERFAMILY SSF55874 579 725 8.51E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 SMART SM00387 615 729 6.3E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14105 50cabbb692b300ec03c68a29a3d7a7cd 751 Gene3D G3DSA:3.30.450.20 378 497 1.3E-7 T 28-03-2018 CJD35_RS14310 2dd60cefe5126ea51ceebd46f250626d 394 Gene3D G3DSA:3.90.105.10 22 55 8.1E-7 T 28-03-2018 CJD35_RS14310 2dd60cefe5126ea51ceebd46f250626d 394 SMART SM00852 175 312 1.2E-41 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS14310 2dd60cefe5126ea51ceebd46f250626d 394 Gene3D G3DSA:2.40.340.10 322 394 3.3E-12 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CJD35_RS14310 2dd60cefe5126ea51ceebd46f250626d 394 SUPERFAMILY SSF53218 172 315 7.72E-39 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS14310 2dd60cefe5126ea51ceebd46f250626d 394 Gene3D G3DSA:3.40.980.10 145 319 7.3E-48 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS14310 2dd60cefe5126ea51ceebd46f250626d 394 SUPERFAMILY SSF63882 2 171 1.23E-44 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CJD35_RS14310 2dd60cefe5126ea51ceebd46f250626d 394 Pfam PF03453 MoeA N-terminal region (domain I and II) 5 159 1.8E-33 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CJD35_RS14310 2dd60cefe5126ea51ceebd46f250626d 394 Pfam PF00994 Probable molybdopterin binding domain 175 312 7.5E-25 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS14310 2dd60cefe5126ea51ceebd46f250626d 394 Gene3D G3DSA:2.170.190.11 56 136 2.6E-22 T 28-03-2018 CJD35_RS14310 2dd60cefe5126ea51ceebd46f250626d 394 Pfam PF03454 MoeA C-terminal region (domain IV) 326 392 9.0E-12 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CJD35_RS14310 2dd60cefe5126ea51ceebd46f250626d 394 SUPERFAMILY SSF63867 323 392 1.57E-12 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CJD35_RS07150 f5e31d67cf3bbda641ca6ac9a8508e88 436 Pfam PF00375 Sodium:dicarboxylate symporter family 21 429 2.0E-112 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07150 f5e31d67cf3bbda641ca6ac9a8508e88 436 PRINTS PR00173 Glutamate-aspartate symporter signature 323 349 9.9E-43 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07150 f5e31d67cf3bbda641ca6ac9a8508e88 436 PRINTS PR00173 Glutamate-aspartate symporter signature 67 87 9.9E-43 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07150 f5e31d67cf3bbda641ca6ac9a8508e88 436 PRINTS PR00173 Glutamate-aspartate symporter signature 173 195 9.9E-43 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07150 f5e31d67cf3bbda641ca6ac9a8508e88 436 PRINTS PR00173 Glutamate-aspartate symporter signature 97 122 9.9E-43 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07150 f5e31d67cf3bbda641ca6ac9a8508e88 436 PRINTS PR00173 Glutamate-aspartate symporter signature 385 405 9.9E-43 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07150 f5e31d67cf3bbda641ca6ac9a8508e88 436 PRINTS PR00173 Glutamate-aspartate symporter signature 358 377 9.9E-43 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07150 f5e31d67cf3bbda641ca6ac9a8508e88 436 PRINTS PR00173 Glutamate-aspartate symporter signature 19 39 9.9E-43 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07150 f5e31d67cf3bbda641ca6ac9a8508e88 436 Gene3D G3DSA:1.10.3860.10 13 435 1.9E-111 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07150 f5e31d67cf3bbda641ca6ac9a8508e88 436 SUPERFAMILY SSF118215 21 430 6.02E-100 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS19645 fd5eebdc1929e0df6788aa4d4750aeaa 395 Gene3D G3DSA:3.40.50.720 1 141 6.2E-42 T 28-03-2018 CJD35_RS19645 fd5eebdc1929e0df6788aa4d4750aeaa 395 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 122 9.8E-28 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CJD35_RS19645 fd5eebdc1929e0df6788aa4d4750aeaa 395 SUPERFAMILY SSF51735 4 151 1.55E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS19645 fd5eebdc1929e0df6788aa4d4750aeaa 395 SUPERFAMILY SSF55347 127 239 1.42E-17 T 28-03-2018 CJD35_RS19645 fd5eebdc1929e0df6788aa4d4750aeaa 395 Gene3D G3DSA:3.30.360.10 142 386 1.2E-36 T 28-03-2018 CJD35_RS19645 fd5eebdc1929e0df6788aa4d4750aeaa 395 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 231 5.6E-9 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CJD35_RS14205 f93ad5c1ad6ab0750665dcd1887f1cdb 372 Pfam PF12693 GspL periplasmic domain 225 372 4.8E-11 T 28-03-2018 IPR025691 GspL periplasmic domain CJD35_RS14205 f93ad5c1ad6ab0750665dcd1887f1cdb 372 SUPERFAMILY SSF53067 5 146 1.55E-11 T 28-03-2018 CJD35_RS14205 f93ad5c1ad6ab0750665dcd1887f1cdb 372 Pfam PF05134 Type II secretion system (T2SS), protein L 7 178 3.9E-12 T 28-03-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain CJD35_RS04340 e0caf266918bf758c8bc473ca69ec7b6 434 Pfam PF00012 Hsp70 protein 96 240 1.5E-6 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS04340 e0caf266918bf758c8bc473ca69ec7b6 434 Pfam PF00012 Hsp70 protein 313 423 5.2E-10 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS04340 e0caf266918bf758c8bc473ca69ec7b6 434 Gene3D G3DSA:3.30.420.40 193 408 1.8E-29 T 28-03-2018 CJD35_RS04340 e0caf266918bf758c8bc473ca69ec7b6 434 Gene3D G3DSA:3.30.420.40 4 192 1.8E-25 T 28-03-2018 CJD35_RS04340 e0caf266918bf758c8bc473ca69ec7b6 434 SUPERFAMILY SSF53067 7 180 1.62E-16 T 28-03-2018 CJD35_RS04340 e0caf266918bf758c8bc473ca69ec7b6 434 SUPERFAMILY SSF53067 304 425 1.22E-32 T 28-03-2018 CJD35_RS04340 e0caf266918bf758c8bc473ca69ec7b6 434 SUPERFAMILY SSF53067 185 252 1.22E-32 T 28-03-2018 CJD35_RS01140 624f62b06acd469a27c1bf1417229a09 376 Pfam PF01702 Queuine tRNA-ribosyltransferase 132 369 1.5E-86 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CJD35_RS01140 624f62b06acd469a27c1bf1417229a09 376 Gene3D G3DSA:3.20.20.105 1 376 1.9E-151 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CJD35_RS01140 624f62b06acd469a27c1bf1417229a09 376 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 374 9.5E-145 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CJD35_RS01140 624f62b06acd469a27c1bf1417229a09 376 SUPERFAMILY SSF51713 5 373 3.27E-152 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CJD35_RS01140 624f62b06acd469a27c1bf1417229a09 376 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 372 53.505 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CJD35_RS01140 624f62b06acd469a27c1bf1417229a09 376 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 374 8.0E-150 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CJD35_RS06830 49f59fa02df85c4615b969871c0a7a81 513 Pfam PF00501 AMP-binding enzyme 27 400 7.3E-52 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJD35_RS06830 49f59fa02df85c4615b969871c0a7a81 513 SUPERFAMILY SSF56801 11 499 8.9E-106 T 28-03-2018 CJD35_RS06830 49f59fa02df85c4615b969871c0a7a81 513 Gene3D G3DSA:2.30.38.10 320 394 7.2E-14 T 28-03-2018 CJD35_RS06830 49f59fa02df85c4615b969871c0a7a81 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 152 163 - T 28-03-2018 IPR020845 AMP-binding, conserved site CJD35_RS06830 49f59fa02df85c4615b969871c0a7a81 513 Gene3D G3DSA:3.40.50.980 122 156 5.7E-7 T 28-03-2018 CJD35_RS06830 49f59fa02df85c4615b969871c0a7a81 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 409 486 1.2E-10 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CJD35_RS06830 49f59fa02df85c4615b969871c0a7a81 513 Gene3D G3DSA:3.30.300.30 395 507 1.8E-25 T 28-03-2018 CJD35_RS06830 49f59fa02df85c4615b969871c0a7a81 513 Gene3D G3DSA:3.40.50.980 17 121 1.2E-18 T 28-03-2018 CJD35_RS06830 49f59fa02df85c4615b969871c0a7a81 513 Gene3D G3DSA:3.40.50.980 157 317 1.4E-30 T 28-03-2018 CJD35_RS02175 fb55587cfd4613b83fb4cd45184262a9 120 Pfam PF07237 Protein of unknown function (DUF1428) 3 104 1.5E-44 T 28-03-2018 IPR009874 Protein of unknown function DUF1428 CJD35_RS02175 fb55587cfd4613b83fb4cd45184262a9 120 PIRSF PIRSF007028 1 118 6.8E-48 T 28-03-2018 IPR009874 Protein of unknown function DUF1428 CJD35_RS02175 fb55587cfd4613b83fb4cd45184262a9 120 Gene3D G3DSA:3.30.70.100 1 118 2.5E-56 T 28-03-2018 CJD35_RS02175 fb55587cfd4613b83fb4cd45184262a9 120 SUPERFAMILY SSF54909 1 117 9.47E-47 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS11475 e4e3fbc67d67d197ee0290afd5278355 509 Pfam PF05136 Phage portal protein, lambda family 43 389 8.4E-88 T 28-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 CJD35_RS11475 e4e3fbc67d67d197ee0290afd5278355 509 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 42 486 1.9E-63 T 28-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 CJD35_RS18160 04b8602aee069bf65dedc85498e10f84 111 Gene3D G3DSA:3.40.190.10 3 66 1.5E-12 T 28-03-2018 CJD35_RS18160 04b8602aee069bf65dedc85498e10f84 111 SUPERFAMILY SSF53850 5 96 1.99E-15 T 28-03-2018 CJD35_RS18160 04b8602aee069bf65dedc85498e10f84 111 Pfam PF03466 LysR substrate binding domain 8 96 3.1E-14 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS21280 04b8602aee069bf65dedc85498e10f84 111 Gene3D G3DSA:3.40.190.10 3 66 1.5E-12 T 28-03-2018 CJD35_RS21280 04b8602aee069bf65dedc85498e10f84 111 SUPERFAMILY SSF53850 5 96 1.99E-15 T 28-03-2018 CJD35_RS21280 04b8602aee069bf65dedc85498e10f84 111 Pfam PF03466 LysR substrate binding domain 8 96 3.1E-14 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS17775 e902064200542f83fd4f2df4513d04ad 244 SUPERFAMILY SSF46894 144 237 2.61E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS17775 e902064200542f83fd4f2df4513d04ad 244 SMART SM00862 163 237 3.1E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS17775 e902064200542f83fd4f2df4513d04ad 244 Gene3D G3DSA:1.10.10.10 136 242 3.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17775 e902064200542f83fd4f2df4513d04ad 244 SMART SM00448 10 121 2.2E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS17775 e902064200542f83fd4f2df4513d04ad 244 SUPERFAMILY SSF52172 6 133 8.54E-41 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS17775 e902064200542f83fd4f2df4513d04ad 244 Gene3D G3DSA:3.40.50.2300 1 135 4.5E-37 T 28-03-2018 CJD35_RS17775 e902064200542f83fd4f2df4513d04ad 244 Pfam PF00072 Response regulator receiver domain 12 121 1.6E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS17775 e902064200542f83fd4f2df4513d04ad 244 Pfam PF00486 Transcriptional regulatory protein, C terminal 166 237 2.3E-14 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS12525 6e3170b2b2e662e59713f08716e432dd 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CJD35_RS12525 6e3170b2b2e662e59713f08716e432dd 369 Pfam PF00107 Zinc-binding dehydrogenase 197 330 1.7E-21 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS12525 6e3170b2b2e662e59713f08716e432dd 369 SUPERFAMILY SSF51735 161 333 3.44E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS12525 6e3170b2b2e662e59713f08716e432dd 369 SUPERFAMILY SSF50129 1 185 5.78E-70 T 28-03-2018 IPR011032 GroES-like CJD35_RS12525 6e3170b2b2e662e59713f08716e432dd 369 SUPERFAMILY SSF50129 318 369 1.88E-11 T 28-03-2018 IPR011032 GroES-like CJD35_RS12525 6e3170b2b2e662e59713f08716e432dd 369 Gene3D G3DSA:3.40.50.720 189 310 2.7E-24 T 28-03-2018 CJD35_RS12525 6e3170b2b2e662e59713f08716e432dd 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 1.6E-25 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS12525 6e3170b2b2e662e59713f08716e432dd 369 Gene3D G3DSA:3.90.180.10 1 188 4.6E-58 T 28-03-2018 CJD35_RS12525 6e3170b2b2e662e59713f08716e432dd 369 SMART SM00829 12 367 9.8E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS12525 6e3170b2b2e662e59713f08716e432dd 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 4.3E-219 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CJD35_RS12525 6e3170b2b2e662e59713f08716e432dd 369 Gene3D G3DSA:3.90.180.10 311 369 2.7E-5 T 28-03-2018 CJD35_RS19570 3ad6cfe0298c6b33162808316499b66a 340 Pfam PF04909 Amidohydrolase 5 329 2.1E-54 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS19570 3ad6cfe0298c6b33162808316499b66a 340 Gene3D G3DSA:3.20.20.140 3 339 2.3E-55 T 28-03-2018 CJD35_RS19570 3ad6cfe0298c6b33162808316499b66a 340 SUPERFAMILY SSF51556 4 334 4.86E-87 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS18695 5d7f0ed0b4bbadd0c9c176eaa1d57b03 102 SUPERFAMILY SSF82057 31 101 1.6E-25 T 28-03-2018 CJD35_RS18695 5d7f0ed0b4bbadd0c9c176eaa1d57b03 102 Pfam PF03831 PhnA domain 35 101 2.2E-29 T 28-03-2018 IPR013988 PhnA protein, C-terminal CJD35_RS18695 5d7f0ed0b4bbadd0c9c176eaa1d57b03 102 Gene3D G3DSA:2.30.30.40 34 101 2.5E-30 T 28-03-2018 CJD35_RS00560 a3c116d7c99b61625c8d7deae268422a 233 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 13 223 4.2E-64 T 28-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CJD35_RS00560 a3c116d7c99b61625c8d7deae268422a 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 225 6.3E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJD35_RS00560 a3c116d7c99b61625c8d7deae268422a 233 SUPERFAMILY SSF161098 6 217 1.96E-47 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJD35_RS00560 a3c116d7c99b61625c8d7deae268422a 233 Gene3D G3DSA:1.10.3720.10 3 226 9.8E-34 T 28-03-2018 CJD35_RS09790 74b603dc2bf61d01552c23576a173023 217 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CJD35_RS09790 74b603dc2bf61d01552c23576a173023 217 SUPERFAMILY SSF51569 1 215 1.57E-76 T 28-03-2018 CJD35_RS09790 74b603dc2bf61d01552c23576a173023 217 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 205 1.4E-55 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CJD35_RS09790 74b603dc2bf61d01552c23576a173023 217 Gene3D G3DSA:3.20.20.70 1 216 5.7E-71 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS09790 74b603dc2bf61d01552c23576a173023 217 Hamap MF_00494 Probable transaldolase [tal]. 1 214 44.451 T 28-03-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CJD35_RS09790 74b603dc2bf61d01552c23576a173023 217 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 211 1.2E-86 T 28-03-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CJD35_RS16225 3ccbd1d5890a71bb7db914f3a86e485f 312 Pfam PF13356 Arm DNA-binding domain 2 85 5.4E-13 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CJD35_RS16225 3ccbd1d5890a71bb7db914f3a86e485f 312 Gene3D G3DSA:1.10.443.10 203 311 9.9E-8 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS16225 3ccbd1d5890a71bb7db914f3a86e485f 312 Gene3D G3DSA:1.10.150.130 86 202 4.9E-18 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS16225 3ccbd1d5890a71bb7db914f3a86e485f 312 SUPERFAMILY SSF56349 97 309 8.54E-35 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS03950 5b0cf9b73598b131ce6e6203805d5d7f 95 Pfam PF04226 Transglycosylase associated protein 46 91 3.0E-10 T 28-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 CJD35_RS15710 33d2b415c4aaf43420a9ccb62ad78c68 306 Pfam PF00107 Zinc-binding dehydrogenase 139 251 6.4E-15 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS15710 33d2b415c4aaf43420a9ccb62ad78c68 306 Gene3D G3DSA:3.40.50.720 132 251 2.4E-19 T 28-03-2018 CJD35_RS15710 33d2b415c4aaf43420a9ccb62ad78c68 306 SUPERFAMILY SSF50129 1 141 1.24E-20 T 28-03-2018 IPR011032 GroES-like CJD35_RS15710 33d2b415c4aaf43420a9ccb62ad78c68 306 SUPERFAMILY SSF51735 101 260 1.65E-26 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15710 33d2b415c4aaf43420a9ccb62ad78c68 306 Gene3D G3DSA:3.90.180.10 1 131 3.8E-25 T 28-03-2018 CJD35_RS15710 33d2b415c4aaf43420a9ccb62ad78c68 306 SMART SM00829 7 304 2.2E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS13780 e07b407c35435255654b0216b7741ff0 100 Pfam PF05433 Glycine zipper 2TM domain 54 93 3.2E-9 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CJD35_RS02455 8657647c7418fb47652d0d1ee190ba0b 355 Gene3D G3DSA:3.30.66.10 46 111 8.5E-27 T 28-03-2018 IPR035447 DNA topoisomerase I, N-terminal CJD35_RS02455 8657647c7418fb47652d0d1ee190ba0b 355 Gene3D G3DSA:1.20.120.380 264 329 1.3E-17 T 28-03-2018 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 CJD35_RS02455 8657647c7418fb47652d0d1ee190ba0b 355 SUPERFAMILY SSF55869 54 113 8.11E-18 T 28-03-2018 IPR035447 DNA topoisomerase I, N-terminal CJD35_RS02455 8657647c7418fb47652d0d1ee190ba0b 355 Gene3D G3DSA:3.90.15.10 112 258 5.2E-35 T 28-03-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 CJD35_RS02455 8657647c7418fb47652d0d1ee190ba0b 355 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 112 283 1.7E-25 T 28-03-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 CJD35_RS02455 8657647c7418fb47652d0d1ee190ba0b 355 SUPERFAMILY SSF56349 109 340 2.35E-60 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS02455 8657647c7418fb47652d0d1ee190ba0b 355 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 176 190 5.6E-7 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS02455 8657647c7418fb47652d0d1ee190ba0b 355 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 304 315 5.6E-7 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS02455 8657647c7418fb47652d0d1ee190ba0b 355 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 153 172 5.6E-7 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS02455 8657647c7418fb47652d0d1ee190ba0b 355 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 262 276 5.6E-7 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS16480 f93cf9dd44f5e15d9d9ba5f13f758e13 596 Gene3D G3DSA:2.170.130.10 2 49 2.6E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS16480 f93cf9dd44f5e15d9d9ba5f13f758e13 596 SUPERFAMILY SSF56935 7 596 6.54E-119 T 28-03-2018 CJD35_RS16480 f93cf9dd44f5e15d9d9ba5f13f758e13 596 Pfam PF07715 TonB-dependent Receptor Plug Domain 8 37 1.9E-5 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS16480 f93cf9dd44f5e15d9d9ba5f13f758e13 596 Pfam PF00593 TonB dependent receptor 138 594 6.3E-66 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS16480 f93cf9dd44f5e15d9d9ba5f13f758e13 596 Gene3D G3DSA:2.40.170.20 50 596 7.1E-87 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS16480 f93cf9dd44f5e15d9d9ba5f13f758e13 596 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 9 596 7.7E-89 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CJD35_RS16645 87b325e62e1ed5f12f8ea7cb3058b6d4 291 Gene3D G3DSA:3.40.190.10 89 177 6.3E-13 T 28-03-2018 CJD35_RS16645 87b325e62e1ed5f12f8ea7cb3058b6d4 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 64 1.9E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS16645 87b325e62e1ed5f12f8ea7cb3058b6d4 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS16645 87b325e62e1ed5f12f8ea7cb3058b6d4 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS16645 87b325e62e1ed5f12f8ea7cb3058b6d4 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS16645 87b325e62e1ed5f12f8ea7cb3058b6d4 291 Pfam PF03466 LysR substrate binding domain 89 287 1.1E-21 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS16645 87b325e62e1ed5f12f8ea7cb3058b6d4 291 Gene3D G3DSA:3.40.190.10 178 265 6.9E-11 T 28-03-2018 CJD35_RS16645 87b325e62e1ed5f12f8ea7cb3058b6d4 291 Gene3D G3DSA:1.10.10.10 1 88 3.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16645 87b325e62e1ed5f12f8ea7cb3058b6d4 291 SUPERFAMILY SSF53850 92 289 5.07E-25 T 28-03-2018 CJD35_RS16645 87b325e62e1ed5f12f8ea7cb3058b6d4 291 SUPERFAMILY SSF46785 1 91 1.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03840 d894250c9dd083b2da1c86d1d858ae0f 220 SUPERFAMILY SSF51366 5 217 3.53E-75 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJD35_RS03840 d894250c9dd083b2da1c86d1d858ae0f 220 PIRSF PIRSF001461 1 219 1.6E-92 T 28-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CJD35_RS03840 d894250c9dd083b2da1c86d1d858ae0f 220 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 203 5.4E-85 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CJD35_RS03840 d894250c9dd083b2da1c86d1d858ae0f 220 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CJD35_RS03840 d894250c9dd083b2da1c86d1d858ae0f 220 Gene3D G3DSA:3.20.20.70 1 219 2.0E-85 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS03840 d894250c9dd083b2da1c86d1d858ae0f 220 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CJD35_RS03840 d894250c9dd083b2da1c86d1d858ae0f 220 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 218 6.5E-89 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CJD35_RS17645 fafb413d314301c5330adfd91f337d71 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 258 2.9E-50 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS17645 fafb413d314301c5330adfd91f337d71 260 Gene3D G3DSA:3.90.226.10 3 217 1.1E-57 T 28-03-2018 CJD35_RS17645 fafb413d314301c5330adfd91f337d71 260 Gene3D G3DSA:1.10.12.10 218 260 2.0E-9 T 28-03-2018 IPR014748 Crontonase, C-terminal CJD35_RS17645 fafb413d314301c5330adfd91f337d71 260 SUPERFAMILY SSF52096 2 258 3.95E-69 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS07390 c5fbd5cad2fb690af56420319d6e6a98 940 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 41 939 2.3E-159 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor CJD35_RS07390 c5fbd5cad2fb690af56420319d6e6a98 940 SUPERFAMILY SSF56935 256 512 3.66E-75 T 28-03-2018 CJD35_RS07390 c5fbd5cad2fb690af56420319d6e6a98 940 SUPERFAMILY SSF56935 32 179 3.66E-75 T 28-03-2018 CJD35_RS07390 c5fbd5cad2fb690af56420319d6e6a98 940 SUPERFAMILY SSF56935 550 939 3.66E-75 T 28-03-2018 CJD35_RS07390 c5fbd5cad2fb690af56420319d6e6a98 940 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 149 1.7E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS07390 c5fbd5cad2fb690af56420319d6e6a98 940 Gene3D G3DSA:2.170.130.10 55 171 2.1E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS07390 c5fbd5cad2fb690af56420319d6e6a98 940 Gene3D G3DSA:2.40.170.20 201 939 1.6E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07390 c5fbd5cad2fb690af56420319d6e6a98 940 Pfam PF00593 TonB dependent receptor 436 938 6.3E-31 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS06755 396960ebf32cbc837d76a365d24d3036 343 PIRSF PIRSF005508 1 342 1.2E-113 T 28-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CJD35_RS06755 396960ebf32cbc837d76a365d24d3036 343 Pfam PF01758 Sodium Bile acid symporter family 48 242 4.9E-36 T 28-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CJD35_RS06755 396960ebf32cbc837d76a365d24d3036 343 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 1 329 2.8E-113 T 28-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CJD35_RS05250 2aa652d97aa9cb56125741f293e65310 394 Pfam PF02661 Fic/DOC family 131 236 4.4E-21 T 28-03-2018 IPR003812 Fido domain CJD35_RS05250 2aa652d97aa9cb56125741f293e65310 394 Gene3D G3DSA:1.10.10.10 296 390 2.9E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05250 2aa652d97aa9cb56125741f293e65310 394 SUPERFAMILY SSF140931 109 303 1.83E-46 T 28-03-2018 IPR003812 Fido domain CJD35_RS05250 2aa652d97aa9cb56125741f293e65310 394 Pfam PF13784 Fic/DOC family N-terminal 44 125 2.5E-29 T 28-03-2018 IPR025758 Fic/DOC N-terminal CJD35_RS05250 2aa652d97aa9cb56125741f293e65310 394 PIRSF PIRSF038925 18 385 6.1E-121 T 28-03-2018 IPR026287 Adenosine monophosphate-protein transferase CJD35_RS05250 2aa652d97aa9cb56125741f293e65310 394 Pfam PF13412 Winged helix-turn-helix DNA-binding 321 362 1.4E-7 T 28-03-2018 CJD35_RS05250 2aa652d97aa9cb56125741f293e65310 394 Gene3D G3DSA:1.10.3290.10 43 295 1.6E-59 T 28-03-2018 IPR003812 Fido domain CJD35_RS05250 2aa652d97aa9cb56125741f293e65310 394 SUPERFAMILY SSF46785 318 376 9.33E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS13015 dac6a18f8c935a0e5d0892283ab9bec7 508 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 114 278 6.6E-13 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS13015 dac6a18f8c935a0e5d0892283ab9bec7 508 Hamap MF_01571 Proline--tRNA ligase [proS]. 6 508 39.582 T 28-03-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 CJD35_RS13015 dac6a18f8c935a0e5d0892283ab9bec7 508 SUPERFAMILY SSF55681 11 287 1.2E-68 T 28-03-2018 CJD35_RS13015 dac6a18f8c935a0e5d0892283ab9bec7 508 SUPERFAMILY SSF52954 289 425 4.23E-20 T 28-03-2018 IPR004154 Anticodon-binding CJD35_RS13015 dac6a18f8c935a0e5d0892283ab9bec7 508 Gene3D G3DSA:3.30.930.10 5 287 1.5E-59 T 28-03-2018 CJD35_RS13015 dac6a18f8c935a0e5d0892283ab9bec7 508 TIGRFAM TIGR00408 proS_fam_I: proline--tRNA ligase 8 508 2.9E-135 T 28-03-2018 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 CJD35_RS13015 dac6a18f8c935a0e5d0892283ab9bec7 508 Gene3D G3DSA:3.30.110.30 430 507 6.2E-7 T 28-03-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 CJD35_RS13015 dac6a18f8c935a0e5d0892283ab9bec7 508 Pfam PF03129 Anticodon binding domain 300 383 3.9E-7 T 28-03-2018 IPR004154 Anticodon-binding CJD35_RS13015 dac6a18f8c935a0e5d0892283ab9bec7 508 SUPERFAMILY SSF64586 432 508 4.12E-9 T 28-03-2018 IPR017449 Prolyl-tRNA synthetase, class II GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 CJD35_RS13015 dac6a18f8c935a0e5d0892283ab9bec7 508 SMART SM00946 435 508 3.5E-10 T 28-03-2018 IPR016061 Proline-tRNA ligase, class II, C-terminal GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-6782315 CJD35_RS13015 dac6a18f8c935a0e5d0892283ab9bec7 508 Gene3D G3DSA:3.40.50.800 288 416 1.5E-19 T 28-03-2018 IPR004154 Anticodon-binding CJD35_RS16050 cb56605c804c863f01df770bb88f9fb1 91 SMART SM00411 1 90 1.1E-35 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS16050 cb56605c804c863f01df770bb88f9fb1 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.0E-30 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS16050 cb56605c804c863f01df770bb88f9fb1 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CJD35_RS16050 cb56605c804c863f01df770bb88f9fb1 91 Gene3D G3DSA:4.10.520.10 1 91 1.1E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS16050 cb56605c804c863f01df770bb88f9fb1 91 SUPERFAMILY SSF47729 1 90 7.95E-28 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS16050 cb56605c804c863f01df770bb88f9fb1 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.8E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS16050 cb56605c804c863f01df770bb88f9fb1 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.8E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS16050 cb56605c804c863f01df770bb88f9fb1 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.8E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS07595 f0d65448d43a9d8c03af926569f31dda 296 Gene3D G3DSA:3.40.190.10 24 113 8.2E-27 T 28-03-2018 CJD35_RS07595 f0d65448d43a9d8c03af926569f31dda 296 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 174 196 - T 28-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CJD35_RS07595 f0d65448d43a9d8c03af926569f31dda 296 SUPERFAMILY SSF55021 193 290 6.62E-22 T 28-03-2018 CJD35_RS07595 f0d65448d43a9d8c03af926569f31dda 296 Gene3D G3DSA:3.40.190.10 114 188 3.0E-24 T 28-03-2018 CJD35_RS07595 f0d65448d43a9d8c03af926569f31dda 296 Gene3D G3DSA:3.30.70.260 204 296 3.6E-22 T 28-03-2018 CJD35_RS07595 f0d65448d43a9d8c03af926569f31dda 296 Pfam PF00800 Prephenate dehydratase 27 199 2.9E-51 T 28-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CJD35_RS07595 f0d65448d43a9d8c03af926569f31dda 296 SUPERFAMILY SSF53850 27 202 1.41E-54 T 28-03-2018 CJD35_RS07595 f0d65448d43a9d8c03af926569f31dda 296 PIRSF PIRSF001500 10 293 1.4E-56 T 28-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 Pfam PF14520 Helix-hairpin-helix domain 585 633 2.4E-8 T 28-03-2018 CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 Gene3D G3DSA:3.40.1440.10 31 128 2.6E-20 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 SMART SM00465 44 125 3.4E-16 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 SMART SM00278 584 603 0.75 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 SMART SM00278 616 635 9.3 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 SUPERFAMILY SSF82771 45 127 9.15E-19 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 409 570 2.1E-50 T 28-03-2018 IPR001162 UvrC family homology region CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 Pfam PF02151 UvrB/uvrC motif 233 263 8.8E-8 T 28-03-2018 IPR001943 UVR domain GO:0005515 CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 SUPERFAMILY SSF47781 549 637 4.13E-22 T 28-03-2018 IPR010994 RuvA domain 2-like CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 SUPERFAMILY SSF46600 217 270 2.75E-11 T 28-03-2018 IPR001943 UVR domain GO:0005515 CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 37 616 5.1E-164 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 Pfam PF01541 GIY-YIG catalytic domain 46 120 1.5E-7 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 Gene3D G3DSA:1.10.150.20 583 638 1.0E-15 T 28-03-2018 CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 Hamap MF_00203 UvrABC system protein C [uvrC]. 31 635 27.006 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CJD35_RS12165 e0de6133fd8f2740ca90909182bf19d1 638 Gene3D G3DSA:4.10.860.10 210 264 1.9E-12 T 28-03-2018 IPR001943 UVR domain GO:0005515 CJD35_RS14120 e59f3fbfc07270867d8ce59408b9bbf6 340 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 100 118 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CJD35_RS14120 e59f3fbfc07270867d8ce59408b9bbf6 340 SUPERFAMILY SSF51395 16 324 1.32E-95 T 28-03-2018 CJD35_RS14120 e59f3fbfc07270867d8ce59408b9bbf6 340 Gene3D G3DSA:3.20.20.70 12 254 9.0E-59 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS14120 e59f3fbfc07270867d8ce59408b9bbf6 340 Gene3D G3DSA:1.10.1200.80 257 335 2.8E-21 T 28-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CJD35_RS14120 e59f3fbfc07270867d8ce59408b9bbf6 340 PIRSF PIRSF006621 6 332 4.4E-109 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CJD35_RS14120 e59f3fbfc07270867d8ce59408b9bbf6 340 Pfam PF01207 Dihydrouridine synthase (Dus) 19 318 5.1E-106 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CJD35_RS14120 e59f3fbfc07270867d8ce59408b9bbf6 340 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 9 324 6.7E-118 T 28-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CJD35_RS17170 5839d3d7cc3f0154c48a35a5827e69a9 444 Pfam PF07690 Major Facilitator Superfamily 27 393 2.4E-18 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS17170 5839d3d7cc3f0154c48a35a5827e69a9 444 Gene3D G3DSA:1.20.1250.20 4 222 1.3E-15 T 28-03-2018 CJD35_RS17170 5839d3d7cc3f0154c48a35a5827e69a9 444 Gene3D G3DSA:1.20.1250.20 228 441 5.2E-23 T 28-03-2018 CJD35_RS17170 5839d3d7cc3f0154c48a35a5827e69a9 444 SUPERFAMILY SSF103473 16 439 3.27E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 SUPERFAMILY SSF49503 59 186 1.6E-36 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 Pfam PF07732 Multicopper oxidase 58 161 1.4E-38 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 SUPERFAMILY SSF49503 426 572 3.93E-36 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 Gene3D G3DSA:2.60.40.420 366 573 8.4E-49 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 TIGRFAM TIGR01480 copper_res_A: copper-resistance protein, CopA family 5 573 1.7E-237 T 28-03-2018 IPR006376 Copper-resistance protein CopA GO:0005507|GO:0042597 CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 Gene3D G3DSA:2.60.40.420 44 160 2.0E-31 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 ProSitePatterns PS00079 Multicopper oxidases signature 1. 550 570 - T 28-03-2018 IPR033138 Multicopper oxidases, conserved site CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 SUPERFAMILY SSF49503 167 370 9.71E-53 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 Pfam PF07731 Multicopper oxidase 458 574 1.5E-26 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 ProSitePatterns PS00080 Multicopper oxidases signature 2. 555 566 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 Gene3D G3DSA:2.60.40.420 167 365 6.2E-35 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS16690 bfe5b12d4270393de1072493dfdbc599 579 Pfam PF00394 Multicopper oxidase 172 329 5.9E-29 T 28-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 CJD35_RS13510 4f80e15d38c4b71664b69c18313204e6 69 Pfam PF08279 HTH domain 9 62 5.9E-6 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 CJD35_RS13510 4f80e15d38c4b71664b69c18313204e6 69 Gene3D G3DSA:1.10.10.10 2 65 9.5E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS13510 4f80e15d38c4b71664b69c18313204e6 69 SUPERFAMILY SSF46785 8 64 3.98E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03650 686af705d91c64125b8df630468e4b11 647 SUPERFAMILY SSF56801 13 643 1.83E-176 T 28-03-2018 CJD35_RS03650 686af705d91c64125b8df630468e4b11 647 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 23 642 1.0E-293 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CJD35_RS03650 686af705d91c64125b8df630468e4b11 647 Gene3D G3DSA:3.40.50.980 74 264 1.7E-49 T 28-03-2018 CJD35_RS03650 686af705d91c64125b8df630468e4b11 647 Gene3D G3DSA:3.40.50.980 265 425 1.1E-38 T 28-03-2018 CJD35_RS03650 686af705d91c64125b8df630468e4b11 647 Pfam PF00501 AMP-binding enzyme 83 520 1.5E-93 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJD35_RS03650 686af705d91c64125b8df630468e4b11 647 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 1 645 51.345 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CJD35_RS03650 686af705d91c64125b8df630468e4b11 647 Gene3D G3DSA:3.30.300.30 514 627 1.8E-25 T 28-03-2018 CJD35_RS03650 686af705d91c64125b8df630468e4b11 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 25 80 2.5E-15 T 28-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CJD35_RS03650 686af705d91c64125b8df630468e4b11 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 28-03-2018 IPR020845 AMP-binding, conserved site CJD35_RS03650 686af705d91c64125b8df630468e4b11 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 529 607 3.5E-25 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CJD35_RS03650 686af705d91c64125b8df630468e4b11 647 Gene3D G3DSA:2.30.38.10 426 513 7.0E-13 T 28-03-2018 CJD35_RS04515 c9c3f04f03786ad175e3dce2635770fb 411 Pfam PF07690 Major Facilitator Superfamily 213 381 1.7E-10 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS04515 c9c3f04f03786ad175e3dce2635770fb 411 Gene3D G3DSA:1.20.1250.20 189 388 5.7E-15 T 28-03-2018 CJD35_RS04515 c9c3f04f03786ad175e3dce2635770fb 411 SUPERFAMILY SSF103473 9 384 1.06E-34 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS04515 c9c3f04f03786ad175e3dce2635770fb 411 Gene3D G3DSA:1.20.1250.20 1 183 4.8E-12 T 28-03-2018 CJD35_RS19745 aa5ddceb33589cc507a39da578e090a6 861 Gene3D G3DSA:3.40.50.300 457 764 3.3E-20 T 28-03-2018 CJD35_RS19745 aa5ddceb33589cc507a39da578e090a6 861 SUPERFAMILY SSF52540 425 806 4.09E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS19745 aa5ddceb33589cc507a39da578e090a6 861 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 35 840 2.2E-194 T 28-03-2018 IPR014117 Type-IV secretion system protein TraC CJD35_RS19745 aa5ddceb33589cc507a39da578e090a6 861 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 30 275 3.4E-58 T 28-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CJD35_RS19745 aa5ddceb33589cc507a39da578e090a6 861 Pfam PF12846 AAA-like domain 475 734 1.0E-14 T 28-03-2018 CJD35_RS19745 aa5ddceb33589cc507a39da578e090a6 861 SMART SM00382 474 745 0.0087 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 SUPERFAMILY SSF51735 38 280 5.07E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 45 278 4.2E-61 T 28-03-2018 CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 175 2.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 115 126 2.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 187 206 2.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 174 202 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 Gene3D G3DSA:3.40.50.720 15 282 6.6E-76 T 28-03-2018 CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 243 263 1.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 225 1.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 206 1.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 40 57 1.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18065 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 126 1.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 SUPERFAMILY SSF51735 38 280 5.07E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 45 278 4.2E-61 T 28-03-2018 CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 175 2.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 115 126 2.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 187 206 2.5E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 174 202 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 Gene3D G3DSA:3.40.50.720 15 282 6.6E-76 T 28-03-2018 CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 243 263 1.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 225 1.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 206 1.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 40 57 1.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21185 950759a9b2fa534596f0a364f3784728 283 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 126 1.3E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS05585 bd8585b6b891dd22fff83e6d132f7b9d 357 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 164 357 39.459 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CJD35_RS05585 bd8585b6b891dd22fff83e6d132f7b9d 357 Pfam PF00925 GTP cyclohydrolase II 171 332 5.8E-62 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CJD35_RS05585 bd8585b6b891dd22fff83e6d132f7b9d 357 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 183 357 3.9E-68 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CJD35_RS05585 bd8585b6b891dd22fff83e6d132f7b9d 357 SUPERFAMILY SSF142695 175 335 3.79E-56 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CJD35_RS05030 3f161d09adb9f33ec123c29ebb0967b2 355 Pfam PF07859 alpha/beta hydrolase fold 121 327 6.7E-66 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CJD35_RS05030 3f161d09adb9f33ec123c29ebb0967b2 355 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 121 137 - T 28-03-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 Reactome: R-HSA-163560 CJD35_RS05030 3f161d09adb9f33ec123c29ebb0967b2 355 Gene3D G3DSA:3.40.50.1820 34 355 5.3E-57 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS05030 3f161d09adb9f33ec123c29ebb0967b2 355 SUPERFAMILY SSF53474 82 345 1.79E-73 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS07220 945c7884c12931a4e7da4049b901e30f 593 SUPERFAMILY SSF116726 223 296 9.02E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CJD35_RS07220 945c7884c12931a4e7da4049b901e30f 593 Pfam PF02080 TrkA-C domain 227 294 2.6E-6 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CJD35_RS07220 945c7884c12931a4e7da4049b901e30f 593 Pfam PF03600 Citrate transporter 422 586 1.0E-11 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CJD35_RS07220 945c7884c12931a4e7da4049b901e30f 593 Pfam PF03600 Citrate transporter 25 204 3.4E-27 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CJD35_RS07220 945c7884c12931a4e7da4049b901e30f 593 Gene3D G3DSA:3.30.70.1450 303 386 3.0E-7 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CJD35_RS07220 945c7884c12931a4e7da4049b901e30f 593 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 543 559 - T 28-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CJD35_RS07220 945c7884c12931a4e7da4049b901e30f 593 SUPERFAMILY SSF116726 314 385 3.53E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CJD35_RS07220 945c7884c12931a4e7da4049b901e30f 593 Gene3D G3DSA:3.30.70.1450 223 300 4.1E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CJD35_RS01690 a2f9b32d4ea3cbf7982de90d994ee4af 525 Pfam PF00171 Aldehyde dehydrogenase family 17 466 7.0E-43 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS01690 a2f9b32d4ea3cbf7982de90d994ee4af 525 Gene3D G3DSA:3.40.309.10 278 454 9.0E-22 T 28-03-2018 CJD35_RS01690 a2f9b32d4ea3cbf7982de90d994ee4af 525 SUPERFAMILY SSF53720 16 516 1.57E-98 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS01690 a2f9b32d4ea3cbf7982de90d994ee4af 525 Gene3D G3DSA:3.40.605.10 4 277 5.5E-48 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 SMART SM00382 170 313 1.9E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 Gene3D G3DSA:3.40.50.2300 3 143 9.7E-27 T 28-03-2018 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 Pfam PF00072 Response regulator receiver domain 10 122 5.3E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 SMART SM00448 7 121 2.3E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 Gene3D G3DSA:1.10.10.60 433 478 1.2E-13 T 28-03-2018 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 Gene3D G3DSA:3.40.50.300 145 322 1.7E-27 T 28-03-2018 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 SUPERFAMILY SSF52540 149 393 2.22E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 363 372 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 459 1.7E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 459 479 1.7E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 236 251 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 Gene3D G3DSA:1.10.8.60 323 395 5.6E-24 T 28-03-2018 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 SUPERFAMILY SSF52172 10 194 8.25E-33 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 174 187 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 Pfam PF02954 Bacterial regulatory protein, Fis family 436 475 8.2E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 SUPERFAMILY SSF46689 363 479 1.38E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS10990 4057277ad2228fbe037e24b32080b4e5 482 Pfam PF00158 Sigma-54 interaction domain 151 316 3.1E-66 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CJD35_RS15480 2b4410d8a7b71e70f9e012b8d008f3ae 308 SUPERFAMILY SSF142338 4 305 1.57E-82 T 28-03-2018 CJD35_RS15480 2b4410d8a7b71e70f9e012b8d008f3ae 308 Hamap MF_01257 2-phospho-L-lactate transferase [cofD]. 1 308 103.521 T 28-03-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 CJD35_RS15480 2b4410d8a7b71e70f9e012b8d008f3ae 308 TIGRFAM TIGR01819 F420_cofD: 2-phospho-L-lactate transferase 4 300 7.1E-90 T 28-03-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 CJD35_RS15480 2b4410d8a7b71e70f9e012b8d008f3ae 308 Pfam PF01933 Uncharacterised protein family UPF0052 4 269 4.6E-51 T 28-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CJD35_RS15480 2b4410d8a7b71e70f9e012b8d008f3ae 308 Gene3D G3DSA:3.40.50.10680 4 79 3.6E-7 T 28-03-2018 CJD35_RS15480 2b4410d8a7b71e70f9e012b8d008f3ae 308 Gene3D G3DSA:3.40.50.10680 80 308 5.8E-42 T 28-03-2018 CJD35_RS19150 140f7d0aeffb9c7f5a6c70073ff4463c 171 Pfam PF00565 Staphylococcal nuclease homologue 43 147 8.0E-10 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS19150 140f7d0aeffb9c7f5a6c70073ff4463c 171 Gene3D G3DSA:2.40.50.90 20 152 2.4E-17 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain CJD35_RS19150 140f7d0aeffb9c7f5a6c70073ff4463c 171 SMART SM00318 25 151 8.0E-4 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS19150 140f7d0aeffb9c7f5a6c70073ff4463c 171 SUPERFAMILY SSF50199 33 153 3.66E-19 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS08775 d7f277464e23b51328d045fb2be1cd1e 145 Pfam PF03061 Thioesterase superfamily 30 105 8.3E-8 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CJD35_RS08775 d7f277464e23b51328d045fb2be1cd1e 145 SUPERFAMILY SSF54637 12 136 2.72E-22 T 28-03-2018 IPR029069 HotDog domain CJD35_RS08775 d7f277464e23b51328d045fb2be1cd1e 145 Gene3D G3DSA:3.10.129.10 13 139 4.6E-23 T 28-03-2018 CJD35_RS02860 6fede766b36b51ee737cf7810e0ab034 118 SUPERFAMILY SSF52172 4 117 9.53E-18 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS02860 6fede766b36b51ee737cf7810e0ab034 118 Gene3D G3DSA:3.40.50.2300 1 118 4.3E-13 T 28-03-2018 CJD35_RS02860 6fede766b36b51ee737cf7810e0ab034 118 SMART SM00448 5 112 0.0057 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02860 6fede766b36b51ee737cf7810e0ab034 118 Pfam PF00072 Response regulator receiver domain 7 82 1.8E-6 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18180 af5ef344142190661be6f33102f3c0e7 370 Gene3D G3DSA:3.20.20.70 2 362 1.5E-116 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS18180 af5ef344142190661be6f33102f3c0e7 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 339 9.6E-61 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CJD35_RS18180 af5ef344142190661be6f33102f3c0e7 370 SUPERFAMILY SSF51395 3 354 7.94E-113 T 28-03-2018 CJD35_RS21300 af5ef344142190661be6f33102f3c0e7 370 Gene3D G3DSA:3.20.20.70 2 362 1.5E-116 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS21300 af5ef344142190661be6f33102f3c0e7 370 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 339 9.6E-61 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CJD35_RS21300 af5ef344142190661be6f33102f3c0e7 370 SUPERFAMILY SSF51395 3 354 7.94E-113 T 28-03-2018 CJD35_RS19045 65526e2b9703d25f06464651b846cd86 190 Gene3D G3DSA:1.25.40.20 90 180 2.5E-23 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS19045 65526e2b9703d25f06464651b846cd86 190 SMART SM00248 49 78 4.1E-6 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS19045 65526e2b9703d25f06464651b846cd86 190 SMART SM00248 83 112 0.17 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS19045 65526e2b9703d25f06464651b846cd86 190 SMART SM00248 116 145 0.065 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS19045 65526e2b9703d25f06464651b846cd86 190 Pfam PF00023 Ankyrin repeat 117 147 3.4E-4 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS19045 65526e2b9703d25f06464651b846cd86 190 Pfam PF12796 Ankyrin repeats (3 copies) 22 113 3.4E-15 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS19045 65526e2b9703d25f06464651b846cd86 190 SUPERFAMILY SSF48403 21 170 1.58E-38 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS19045 65526e2b9703d25f06464651b846cd86 190 Gene3D G3DSA:1.25.40.20 12 89 2.0E-22 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS19045 65526e2b9703d25f06464651b846cd86 190 PRINTS PR01415 Ankyrin repeat signature 99 113 2.3E-6 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS19045 65526e2b9703d25f06464651b846cd86 190 PRINTS PR01415 Ankyrin repeat signature 50 65 2.3E-6 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS19980 e34039bf894e3592aec48ab7d8438710 109 PIRSF PIRSF002070 1 109 2.1E-21 T 28-03-2018 CJD35_RS19980 e34039bf894e3592aec48ab7d8438710 109 Pfam PF00436 Single-strand binding protein family 1 109 1.5E-16 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CJD35_RS19980 e34039bf894e3592aec48ab7d8438710 109 SUPERFAMILY SSF50249 1 109 1.17E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS19980 e34039bf894e3592aec48ab7d8438710 109 Gene3D G3DSA:2.40.50.140 1 109 5.8E-22 T 28-03-2018 CJD35_RS08360 af2b05903e0e0a540ee541d53052397f 219 Gene3D G3DSA:3.40.50.1000 3 32 0.11 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS08360 af2b05903e0e0a540ee541d53052397f 219 SUPERFAMILY SSF56784 5 215 9.21E-52 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS08360 af2b05903e0e0a540ee541d53052397f 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 73 187 6.1E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CJD35_RS08360 af2b05903e0e0a540ee541d53052397f 219 Gene3D G3DSA:1.10.150.240 33 72 7.6E-11 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CJD35_RS08360 af2b05903e0e0a540ee541d53052397f 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 187 2.7E-28 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS08360 af2b05903e0e0a540ee541d53052397f 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 67 181 6.4E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CJD35_RS08360 af2b05903e0e0a540ee541d53052397f 219 Gene3D G3DSA:3.40.50.1000 73 218 3.3E-29 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS13170 535a6c7f18e9f7ba3aa2bf7788d5ca78 208 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 3 191 3.6E-41 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CJD35_RS13170 535a6c7f18e9f7ba3aa2bf7788d5ca78 208 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 28-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CJD35_RS13170 535a6c7f18e9f7ba3aa2bf7788d5ca78 208 Pfam PF02223 Thymidylate kinase 9 195 1.2E-37 T 28-03-2018 CJD35_RS13170 535a6c7f18e9f7ba3aa2bf7788d5ca78 208 SUPERFAMILY SSF52540 4 190 3.27E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13170 535a6c7f18e9f7ba3aa2bf7788d5ca78 208 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 25.863 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CJD35_RS13170 535a6c7f18e9f7ba3aa2bf7788d5ca78 208 Gene3D G3DSA:3.40.50.300 2 200 6.9E-43 T 28-03-2018 CJD35_RS14945 15f5cac6c46ec1980188d60e0f32092a 120 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 26 104 6.7E-11 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS14945 15f5cac6c46ec1980188d60e0f32092a 120 SUPERFAMILY SSF54292 23 115 3.23E-25 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS14945 15f5cac6c46ec1980188d60e0f32092a 120 Gene3D G3DSA:3.10.20.30 13 120 4.9E-24 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS14945 15f5cac6c46ec1980188d60e0f32092a 120 PRINTS PR00355 Adrenodoxin signature 97 105 7.8E-7 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS14945 15f5cac6c46ec1980188d60e0f32092a 120 PRINTS PR00355 Adrenodoxin signature 74 88 7.8E-7 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS14945 15f5cac6c46ec1980188d60e0f32092a 120 PRINTS PR00355 Adrenodoxin signature 55 65 7.8E-7 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS20600 6e6d8343faa8042f8f37f94b972ece6e 485 SUPERFAMILY SSF49503 29 164 1.54E-32 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS20600 6e6d8343faa8042f8f37f94b972ece6e 485 SUPERFAMILY SSF49503 169 286 5.14E-25 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS20600 6e6d8343faa8042f8f37f94b972ece6e 485 Gene3D G3DSA:2.60.40.420 25 166 1.8E-28 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS20600 6e6d8343faa8042f8f37f94b972ece6e 485 SUPERFAMILY SSF49503 372 484 7.4E-31 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS20600 6e6d8343faa8042f8f37f94b972ece6e 485 ProSitePatterns PS00080 Multicopper oxidases signature 2. 467 478 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CJD35_RS20600 6e6d8343faa8042f8f37f94b972ece6e 485 Pfam PF07731 Multicopper oxidase 379 484 1.4E-26 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CJD35_RS20600 6e6d8343faa8042f8f37f94b972ece6e 485 Pfam PF07732 Multicopper oxidase 48 163 1.9E-28 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CJD35_RS20600 6e6d8343faa8042f8f37f94b972ece6e 485 Gene3D G3DSA:2.60.40.420 167 343 7.4E-25 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS20600 6e6d8343faa8042f8f37f94b972ece6e 485 Gene3D G3DSA:2.60.40.420 344 485 1.7E-31 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS13210 4fa5dc0134b22bdb1e0af0137ebe9d5c 170 Gene3D G3DSA:3.40.630.30 3 170 5.9E-24 T 28-03-2018 CJD35_RS13210 4fa5dc0134b22bdb1e0af0137ebe9d5c 170 SUPERFAMILY SSF55729 12 168 2.62E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS13210 4fa5dc0134b22bdb1e0af0137ebe9d5c 170 Pfam PF00583 Acetyltransferase (GNAT) family 59 143 2.3E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS11615 f2ec3ed9096029097e648c55854543b0 249 SMART SM00893 23 211 1.6E-68 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CJD35_RS11615 f2ec3ed9096029097e648c55854543b0 249 Pfam PF01012 Electron transfer flavoprotein domain 29 206 1.3E-45 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CJD35_RS11615 f2ec3ed9096029097e648c55854543b0 249 PIRSF PIRSF000090 1 248 1.5E-85 T 28-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CJD35_RS11615 f2ec3ed9096029097e648c55854543b0 249 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 28-03-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CJD35_RS11615 f2ec3ed9096029097e648c55854543b0 249 SUPERFAMILY SSF52402 1 242 4.95E-87 T 28-03-2018 CJD35_RS11615 f2ec3ed9096029097e648c55854543b0 249 Gene3D G3DSA:3.40.50.620 1 248 1.1E-85 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS04285 d20fd57412007aceabe6e2c42bf60f50 373 SUPERFAMILY SSF53383 18 367 2.69E-77 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS04285 d20fd57412007aceabe6e2c42bf60f50 373 Gene3D G3DSA:3.90.1150.10 259 373 1.1E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS04285 d20fd57412007aceabe6e2c42bf60f50 373 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 11 370 52.944 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CJD35_RS04285 d20fd57412007aceabe6e2c42bf60f50 373 Gene3D G3DSA:3.40.640.10 49 258 5.5E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS04285 d20fd57412007aceabe6e2c42bf60f50 373 Pfam PF00155 Aminotransferase class I and II 36 365 1.2E-49 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJD35_RS04285 d20fd57412007aceabe6e2c42bf60f50 373 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 18 367 1.0E-84 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CJD35_RS21440 2c766963402e62e99a5d7c26ec36365e 168 Pfam PF01799 [2Fe-2S] binding domain 88 160 3.1E-31 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS21440 2c766963402e62e99a5d7c26ec36365e 168 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 54 62 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CJD35_RS21440 2c766963402e62e99a5d7c26ec36365e 168 Gene3D G3DSA:3.10.20.30 13 89 9.0E-25 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS21440 2c766963402e62e99a5d7c26ec36365e 168 SUPERFAMILY SSF54292 14 103 1.25E-24 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS21440 2c766963402e62e99a5d7c26ec36365e 168 Gene3D G3DSA:1.10.150.120 90 168 5.9E-36 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS21440 2c766963402e62e99a5d7c26ec36365e 168 SUPERFAMILY SSF47741 99 165 3.93E-30 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS21440 2c766963402e62e99a5d7c26ec36365e 168 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 21 72 4.1E-7 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS18320 2c766963402e62e99a5d7c26ec36365e 168 Pfam PF01799 [2Fe-2S] binding domain 88 160 3.1E-31 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS18320 2c766963402e62e99a5d7c26ec36365e 168 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 54 62 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CJD35_RS18320 2c766963402e62e99a5d7c26ec36365e 168 Gene3D G3DSA:3.10.20.30 13 89 9.0E-25 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS18320 2c766963402e62e99a5d7c26ec36365e 168 SUPERFAMILY SSF54292 14 103 1.25E-24 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS18320 2c766963402e62e99a5d7c26ec36365e 168 Gene3D G3DSA:1.10.150.120 90 168 5.9E-36 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS18320 2c766963402e62e99a5d7c26ec36365e 168 SUPERFAMILY SSF47741 99 165 3.93E-30 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS18320 2c766963402e62e99a5d7c26ec36365e 168 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 21 72 4.1E-7 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS03205 e2a0aa320fd68b243867862f19d28a4f 222 Pfam PF01618 MotA/TolQ/ExbB proton channel family 83 192 9.8E-19 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CJD35_RS03205 e2a0aa320fd68b243867862f19d28a4f 222 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 162 179 - T 28-03-2018 IPR000540 Flagellar motor protein MotA, conserved site CJD35_RS06320 98cfc679f958482f68e25fb6eae4f5a5 420 Pfam PF07690 Major Facilitator Superfamily 240 409 4.5E-9 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS06320 98cfc679f958482f68e25fb6eae4f5a5 420 Pfam PF07690 Major Facilitator Superfamily 41 235 2.3E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS06320 98cfc679f958482f68e25fb6eae4f5a5 420 SUPERFAMILY SSF103473 16 414 4.19E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS06320 98cfc679f958482f68e25fb6eae4f5a5 420 Gene3D G3DSA:1.20.1250.20 19 218 8.7E-20 T 28-03-2018 CJD35_RS06320 98cfc679f958482f68e25fb6eae4f5a5 420 Gene3D G3DSA:1.20.1250.20 227 419 2.5E-16 T 28-03-2018 CJD35_RS06930 28870183af22c41c97bfa5da962cfe8e 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06930 28870183af22c41c97bfa5da962cfe8e 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06930 28870183af22c41c97bfa5da962cfe8e 295 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 5.8E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06930 28870183af22c41c97bfa5da962cfe8e 295 SUPERFAMILY SSF51735 1 254 2.66E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06930 28870183af22c41c97bfa5da962cfe8e 295 Gene3D G3DSA:3.40.50.720 1 281 2.5E-50 T 28-03-2018 CJD35_RS06930 28870183af22c41c97bfa5da962cfe8e 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 9.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06930 28870183af22c41c97bfa5da962cfe8e 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 9.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06930 28870183af22c41c97bfa5da962cfe8e 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 9.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06930 28870183af22c41c97bfa5da962cfe8e 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 9.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06930 28870183af22c41c97bfa5da962cfe8e 295 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 9.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06930 28870183af22c41c97bfa5da962cfe8e 295 Pfam PF00106 short chain dehydrogenase 8 202 5.6E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18430 598b92d385c8acd6f77b0b60320538f9 785 Pfam PF03235 Protein of unknown function DUF262 23 352 9.3E-24 T 28-03-2018 IPR004919 Domain of unknown function DUF262 CJD35_RS18430 598b92d385c8acd6f77b0b60320538f9 785 Pfam PF07510 Protein of unknown function (DUF1524) 635 764 1.4E-7 T 28-03-2018 IPR011089 Domain of unknown function DUF1524 CJD35_RS21550 598b92d385c8acd6f77b0b60320538f9 785 Pfam PF03235 Protein of unknown function DUF262 23 352 9.3E-24 T 28-03-2018 IPR004919 Domain of unknown function DUF262 CJD35_RS21550 598b92d385c8acd6f77b0b60320538f9 785 Pfam PF07510 Protein of unknown function (DUF1524) 635 764 1.4E-7 T 28-03-2018 IPR011089 Domain of unknown function DUF1524 CJD35_RS14660 6e9da58891b84bf1fd4bac128bc58d7d 170 Gene3D G3DSA:1.10.1740.10 2 70 3.0E-12 T 28-03-2018 CJD35_RS14660 6e9da58891b84bf1fd4bac128bc58d7d 170 SUPERFAMILY SSF88946 6 82 5.1E-11 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14660 6e9da58891b84bf1fd4bac128bc58d7d 170 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 158 3.0E-18 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14660 6e9da58891b84bf1fd4bac128bc58d7d 170 SUPERFAMILY SSF88659 101 162 1.31E-8 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14660 6e9da58891b84bf1fd4bac128bc58d7d 170 Pfam PF08281 Sigma-70, region 4 109 160 3.3E-8 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14660 6e9da58891b84bf1fd4bac128bc58d7d 170 Gene3D G3DSA:1.10.10.10 71 170 2.5E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS14660 6e9da58891b84bf1fd4bac128bc58d7d 170 Pfam PF04542 Sigma-70 region 2 8 72 1.0E-9 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 13 390 44.691 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 SUPERFAMILY SSF52021 15 158 2.09E-51 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 PRINTS PR00097 Anthranilate synthase component II signature 247 256 7.4E-7 T 28-03-2018 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 PRINTS PR00097 Anthranilate synthase component II signature 361 374 7.4E-7 T 28-03-2018 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 PRINTS PR00097 Anthranilate synthase component II signature 276 287 7.4E-7 T 28-03-2018 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 16 387 3.2E-126 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 Gene3D G3DSA:3.50.30.20 12 163 4.2E-51 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 PRINTS PR00096 Glutamine amidotransferase superfamily signature 276 287 1.4E-12 T 28-03-2018 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 PRINTS PR00096 Glutamine amidotransferase superfamily signature 247 256 1.4E-12 T 28-03-2018 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 PRINTS PR00096 Glutamine amidotransferase superfamily signature 361 374 1.4E-12 T 28-03-2018 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 318 329 2.1E-37 T 28-03-2018 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 293 310 2.1E-37 T 28-03-2018 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 205 219 2.1E-37 T 28-03-2018 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 244 258 2.1E-37 T 28-03-2018 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 276 292 2.1E-37 T 28-03-2018 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 SMART SM01097 13 143 2.1E-77 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 SUPERFAMILY SSF52317 201 387 5.04E-57 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 15 142 1.4E-44 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 Pfam PF00117 Glutamine amidotransferase class-I 207 383 2.3E-43 T 28-03-2018 IPR017926 Glutamine amidotransferase CJD35_RS14865 df12c3d0425cbbb087233f69cd006825 392 Gene3D G3DSA:3.40.50.880 164 390 3.2E-61 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS11685 866a28b07a91c38890e96f51c8592619 326 SUPERFAMILY SSF55729 142 304 5.3E-12 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS11685 866a28b07a91c38890e96f51c8592619 326 Gene3D G3DSA:3.40.630.30 129 310 1.2E-14 T 28-03-2018 CJD35_RS11685 866a28b07a91c38890e96f51c8592619 326 Pfam PF13480 Acetyltransferase (GNAT) domain 159 290 4.4E-15 T 28-03-2018 CJD35_RS05550 afb72f82a0a47ecb8516b3c5997189b3 242 SMART SM00382 97 229 1.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS05550 afb72f82a0a47ecb8516b3c5997189b3 242 Gene3D G3DSA:3.40.50.300 67 230 2.3E-16 T 28-03-2018 CJD35_RS05550 afb72f82a0a47ecb8516b3c5997189b3 242 Pfam PF01695 IstB-like ATP binding protein 55 229 1.2E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS05550 afb72f82a0a47ecb8516b3c5997189b3 242 SUPERFAMILY SSF52540 71 231 7.25E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05550 afb72f82a0a47ecb8516b3c5997189b3 242 PIRSF PIRSF003073 1 242 2.1E-70 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS12445 afb72f82a0a47ecb8516b3c5997189b3 242 SMART SM00382 97 229 1.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS12445 afb72f82a0a47ecb8516b3c5997189b3 242 Gene3D G3DSA:3.40.50.300 67 230 2.3E-16 T 28-03-2018 CJD35_RS12445 afb72f82a0a47ecb8516b3c5997189b3 242 Pfam PF01695 IstB-like ATP binding protein 55 229 1.2E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS12445 afb72f82a0a47ecb8516b3c5997189b3 242 SUPERFAMILY SSF52540 71 231 7.25E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12445 afb72f82a0a47ecb8516b3c5997189b3 242 PIRSF PIRSF003073 1 242 2.1E-70 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS02615 afb72f82a0a47ecb8516b3c5997189b3 242 SMART SM00382 97 229 1.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS02615 afb72f82a0a47ecb8516b3c5997189b3 242 Gene3D G3DSA:3.40.50.300 67 230 2.3E-16 T 28-03-2018 CJD35_RS02615 afb72f82a0a47ecb8516b3c5997189b3 242 Pfam PF01695 IstB-like ATP binding protein 55 229 1.2E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS02615 afb72f82a0a47ecb8516b3c5997189b3 242 SUPERFAMILY SSF52540 71 231 7.25E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS02615 afb72f82a0a47ecb8516b3c5997189b3 242 PIRSF PIRSF003073 1 242 2.1E-70 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS15195 afb72f82a0a47ecb8516b3c5997189b3 242 SMART SM00382 97 229 1.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS15195 afb72f82a0a47ecb8516b3c5997189b3 242 Gene3D G3DSA:3.40.50.300 67 230 2.3E-16 T 28-03-2018 CJD35_RS15195 afb72f82a0a47ecb8516b3c5997189b3 242 Pfam PF01695 IstB-like ATP binding protein 55 229 1.2E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS15195 afb72f82a0a47ecb8516b3c5997189b3 242 SUPERFAMILY SSF52540 71 231 7.25E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15195 afb72f82a0a47ecb8516b3c5997189b3 242 PIRSF PIRSF003073 1 242 2.1E-70 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS11205 afb72f82a0a47ecb8516b3c5997189b3 242 SMART SM00382 97 229 1.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS11205 afb72f82a0a47ecb8516b3c5997189b3 242 Gene3D G3DSA:3.40.50.300 67 230 2.3E-16 T 28-03-2018 CJD35_RS11205 afb72f82a0a47ecb8516b3c5997189b3 242 Pfam PF01695 IstB-like ATP binding protein 55 229 1.2E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS11205 afb72f82a0a47ecb8516b3c5997189b3 242 SUPERFAMILY SSF52540 71 231 7.25E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS11205 afb72f82a0a47ecb8516b3c5997189b3 242 PIRSF PIRSF003073 1 242 2.1E-70 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS06415 afb72f82a0a47ecb8516b3c5997189b3 242 SMART SM00382 97 229 1.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS06415 afb72f82a0a47ecb8516b3c5997189b3 242 Gene3D G3DSA:3.40.50.300 67 230 2.3E-16 T 28-03-2018 CJD35_RS06415 afb72f82a0a47ecb8516b3c5997189b3 242 Pfam PF01695 IstB-like ATP binding protein 55 229 1.2E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS06415 afb72f82a0a47ecb8516b3c5997189b3 242 SUPERFAMILY SSF52540 71 231 7.25E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06415 afb72f82a0a47ecb8516b3c5997189b3 242 PIRSF PIRSF003073 1 242 2.1E-70 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS16920 afb72f82a0a47ecb8516b3c5997189b3 242 SMART SM00382 97 229 1.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS16920 afb72f82a0a47ecb8516b3c5997189b3 242 Gene3D G3DSA:3.40.50.300 67 230 2.3E-16 T 28-03-2018 CJD35_RS16920 afb72f82a0a47ecb8516b3c5997189b3 242 Pfam PF01695 IstB-like ATP binding protein 55 229 1.2E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS16920 afb72f82a0a47ecb8516b3c5997189b3 242 SUPERFAMILY SSF52540 71 231 7.25E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS16920 afb72f82a0a47ecb8516b3c5997189b3 242 PIRSF PIRSF003073 1 242 2.1E-70 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS17240 afb72f82a0a47ecb8516b3c5997189b3 242 SMART SM00382 97 229 1.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS17240 afb72f82a0a47ecb8516b3c5997189b3 242 Gene3D G3DSA:3.40.50.300 67 230 2.3E-16 T 28-03-2018 CJD35_RS17240 afb72f82a0a47ecb8516b3c5997189b3 242 Pfam PF01695 IstB-like ATP binding protein 55 229 1.2E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS17240 afb72f82a0a47ecb8516b3c5997189b3 242 SUPERFAMILY SSF52540 71 231 7.25E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS17240 afb72f82a0a47ecb8516b3c5997189b3 242 PIRSF PIRSF003073 1 242 2.1E-70 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS05390 afb72f82a0a47ecb8516b3c5997189b3 242 SMART SM00382 97 229 1.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS05390 afb72f82a0a47ecb8516b3c5997189b3 242 Gene3D G3DSA:3.40.50.300 67 230 2.3E-16 T 28-03-2018 CJD35_RS05390 afb72f82a0a47ecb8516b3c5997189b3 242 Pfam PF01695 IstB-like ATP binding protein 55 229 1.2E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS05390 afb72f82a0a47ecb8516b3c5997189b3 242 SUPERFAMILY SSF52540 71 231 7.25E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05390 afb72f82a0a47ecb8516b3c5997189b3 242 PIRSF PIRSF003073 1 242 2.1E-70 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS12635 434b585d4651098caa9f124c06ad441e 749 Gene3D G3DSA:1.10.3210.10 327 567 2.1E-4 T 28-03-2018 CJD35_RS12635 434b585d4651098caa9f124c06ad441e 749 Pfam PF05746 DALR anticodon binding domain 613 739 1.6E-6 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CJD35_RS12635 434b585d4651098caa9f124c06ad441e 749 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 747 22.802 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12635 434b585d4651098caa9f124c06ad441e 749 SUPERFAMILY SSF109604 412 516 6.28E-13 T 28-03-2018 CJD35_RS12635 434b585d4651098caa9f124c06ad441e 749 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 237 252 3.0E-16 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12635 434b585d4651098caa9f124c06ad441e 749 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 48 60 3.0E-16 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12635 434b585d4651098caa9f124c06ad441e 749 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 5 18 3.0E-16 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12635 434b585d4651098caa9f124c06ad441e 749 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 310 326 3.0E-16 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12635 434b585d4651098caa9f124c06ad441e 749 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 4 579 9.7E-193 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12635 434b585d4651098caa9f124c06ad441e 749 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 747 1.2E-168 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12635 434b585d4651098caa9f124c06ad441e 749 Gene3D G3DSA:1.10.730.10 568 744 2.0E-8 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS05245 9498a25bbcbe59133edce6c4f52a5807 207 Pfam PF01420 Type I restriction modification DNA specificity domain 64 164 1.0E-4 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CJD35_RS05245 9498a25bbcbe59133edce6c4f52a5807 207 SUPERFAMILY SSF116734 12 195 8.01E-24 T 28-03-2018 CJD35_RS05245 9498a25bbcbe59133edce6c4f52a5807 207 Gene3D G3DSA:3.90.220.20 7 185 1.2E-19 T 28-03-2018 CJD35_RS06270 ee528a430509126d2419c3a48855692f 260 SUPERFAMILY SSF52096 6 259 9.48E-84 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS06270 ee528a430509126d2419c3a48855692f 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CJD35_RS06270 ee528a430509126d2419c3a48855692f 260 Gene3D G3DSA:3.90.226.10 10 217 1.2E-64 T 28-03-2018 CJD35_RS06270 ee528a430509126d2419c3a48855692f 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 259 7.2E-66 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS06270 ee528a430509126d2419c3a48855692f 260 Gene3D G3DSA:1.10.12.10 218 260 9.3E-18 T 28-03-2018 IPR014748 Crontonase, C-terminal CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 Pfam PF08448 PAS fold 45 149 2.5E-11 T 28-03-2018 IPR013656 PAS fold-4 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 Pfam PF00989 PAS fold 160 272 7.5E-13 T 28-03-2018 IPR013767 PAS fold GO:0006355 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 Pfam PF00512 His Kinase A (phospho-acceptor) domain 300 362 8.8E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 34 155 4.1E-16 T 28-03-2018 IPR000014 PAS domain CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 156 283 1.1E-24 T 28-03-2018 IPR000014 PAS domain CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 Gene3D G3DSA:3.30.565.10 363 525 2.4E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SUPERFAMILY SSF55785 45 156 1.4E-22 T 28-03-2018 IPR000014 PAS domain CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 Gene3D G3DSA:3.40.50.2300 537 660 3.5E-23 T 28-03-2018 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SUPERFAMILY SSF55874 355 530 1.57E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 Pfam PF00072 Response regulator receiver domain 548 649 9.0E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SMART SM00086 234 276 0.015 T 28-03-2018 IPR001610 PAC motif CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SMART SM00086 106 148 4.8 T 28-03-2018 IPR001610 PAC motif CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 Gene3D G3DSA:1.10.287.130 295 360 1.5E-7 T 28-03-2018 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 406 523 1.0E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SMART SM00448 546 652 4.1E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 Gene3D G3DSA:3.30.450.20 31 151 4.0E-26 T 28-03-2018 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SUPERFAMILY SSF52172 545 655 1.04E-25 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SUPERFAMILY SSF55785 144 271 1.22E-29 T 28-03-2018 IPR000014 PAS domain CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SMART SM00388 298 364 5.9E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 503 6.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 454 468 6.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 6.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 522 6.4E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SUPERFAMILY SSF47384 292 361 4.71E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SMART SM00387 405 525 9.4E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 Gene3D G3DSA:3.30.450.20 152 294 1.1E-33 T 28-03-2018 CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SMART SM00091 32 99 0.16 T 28-03-2018 IPR000014 PAS domain CJD35_RS00810 3f8b6977c198af0196e41bdb7b4bbe11 674 SMART SM00091 160 229 3.5E-5 T 28-03-2018 IPR000014 PAS domain CJD35_RS07665 9de4564b27267586524828ea971a2eb9 207 SMART SM00448 27 140 3.1E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS07665 9de4564b27267586524828ea971a2eb9 207 Pfam PF00072 Response regulator receiver domain 29 140 7.0E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS07665 9de4564b27267586524828ea971a2eb9 207 Gene3D G3DSA:3.40.50.2300 9 162 1.1E-28 T 28-03-2018 CJD35_RS07665 9de4564b27267586524828ea971a2eb9 207 SUPERFAMILY SSF52172 25 185 4.27E-29 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS21460 654476b2fbffe2f84d72eb2cdf0d7bb0 187 Pfam PF08808 RES domain 2 152 3.0E-23 T 28-03-2018 IPR014914 RES domain CJD35_RS21460 654476b2fbffe2f84d72eb2cdf0d7bb0 187 SMART SM00953 13 160 2.2E-12 T 28-03-2018 IPR014914 RES domain CJD35_RS18340 654476b2fbffe2f84d72eb2cdf0d7bb0 187 Pfam PF08808 RES domain 2 152 3.0E-23 T 28-03-2018 IPR014914 RES domain CJD35_RS18340 654476b2fbffe2f84d72eb2cdf0d7bb0 187 SMART SM00953 13 160 2.2E-12 T 28-03-2018 IPR014914 RES domain CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 Gene3D G3DSA:3.40.50.2300 945 1085 1.4E-38 T 28-03-2018 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 SMART SM00091 569 635 2.2E-8 T 28-03-2018 IPR000014 PAS domain CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 SUPERFAMILY SSF55874 757 929 4.06E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 SMART SM01079 281 469 8.2E-55 T 28-03-2018 IPR006189 CHASE domain CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 SMART SM00387 815 927 5.7E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 565 689 2.7E-19 T 28-03-2018 IPR000014 PAS domain CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 816 925 2.0E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 870 880 5.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 852 866 5.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 911 924 5.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 887 905 5.1E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 SMART SM00448 950 1069 7.0E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 SUPERFAMILY SSF47384 688 770 4.71E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 SUPERFAMILY SSF55785 557 681 1.61E-27 T 28-03-2018 IPR000014 PAS domain CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 Gene3D G3DSA:3.30.565.10 772 935 1.2E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 Gene3D G3DSA:3.30.450.20 538 702 2.6E-37 T 28-03-2018 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 Pfam PF05231 MASE1 29 198 6.2E-23 T 28-03-2018 IPR007895 MASE1 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 Pfam PF00072 Response regulator receiver domain 952 1069 2.1E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 Gene3D G3DSA:1.20.120.160 1086 1178 0.0017 T 28-03-2018 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 SMART SM00086 641 683 3.7E-8 T 28-03-2018 IPR001610 PAC motif CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 SUPERFAMILY SSF52172 950 1075 6.69E-34 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 Pfam PF00512 His Kinase A (phospho-acceptor) domain 704 768 1.3E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 Pfam PF08447 PAS fold 593 676 3.9E-16 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 SMART SM00388 703 768 7.6E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 Pfam PF03924 CHASE domain 284 463 1.2E-42 T 28-03-2018 IPR006189 CHASE domain CJD35_RS16540 41fb85ef1eba18244e411e4913219131 1183 Gene3D G3DSA:1.10.287.130 703 764 6.3E-18 T 28-03-2018 CJD35_RS15545 52e663d475573527934d78921d717acd 292 Pfam PF01575 MaoC like domain 161 264 6.5E-25 T 28-03-2018 IPR002539 MaoC-like domain CJD35_RS15545 52e663d475573527934d78921d717acd 292 SUPERFAMILY SSF54637 8 154 8.91E-32 T 28-03-2018 IPR029069 HotDog domain CJD35_RS15545 52e663d475573527934d78921d717acd 292 Gene3D G3DSA:3.10.129.10 16 157 4.1E-26 T 28-03-2018 CJD35_RS15545 52e663d475573527934d78921d717acd 292 Pfam PF13452 N-terminal half of MaoC dehydratase 50 133 1.0E-6 T 28-03-2018 CJD35_RS15545 52e663d475573527934d78921d717acd 292 SUPERFAMILY SSF54637 161 276 3.28E-28 T 28-03-2018 IPR029069 HotDog domain CJD35_RS15545 52e663d475573527934d78921d717acd 292 Gene3D G3DSA:3.10.129.10 158 286 6.0E-25 T 28-03-2018 CJD35_RS10085 9791c5190a2919a6e94cc0341c94748a 858 SUPERFAMILY SSF52540 513 714 4.83E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS10085 9791c5190a2919a6e94cc0341c94748a 858 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 508 796 1.3E-69 T 28-03-2018 IPR006500 DNA primase, phage/plasmid CJD35_RS10085 9791c5190a2919a6e94cc0341c94748a 858 Gene3D G3DSA:3.40.50.300 512 730 3.5E-10 T 28-03-2018 CJD35_RS10085 9791c5190a2919a6e94cc0341c94748a 858 SUPERFAMILY SSF56747 14 185 3.66E-29 T 28-03-2018 CJD35_RS10085 9791c5190a2919a6e94cc0341c94748a 858 SMART SM00943 18 196 3.0E-47 T 28-03-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal CJD35_RS10085 9791c5190a2919a6e94cc0341c94748a 858 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 18 194 2.9E-40 T 28-03-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal CJD35_RS10085 9791c5190a2919a6e94cc0341c94748a 858 SMART SM00885 356 544 5.6E-30 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CJD35_RS10085 9791c5190a2919a6e94cc0341c94748a 858 Pfam PF08706 D5 N terminal like 356 544 2.4E-22 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CJD35_RS17860 77daa41343858c7ff6537a015b94b8cd 119 Gene3D G3DSA:4.10.940.10 44 119 3.7E-16 T 28-03-2018 CJD35_RS17860 77daa41343858c7ff6537a015b94b8cd 119 ProDom PD591508 QUINOHEMOPROTEIN AMINE SUBUNIT DEHYDROGENASE GAMMA 1.4.99.- CATALYTIC QH-AMDH CTQ 3D-STRUCTURE 53 119 9.0E-33 T 28-03-2018 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain GO:0016638|GO:0055114 CJD35_RS17860 77daa41343858c7ff6537a015b94b8cd 119 SUPERFAMILY SSF69131 45 119 2.75E-37 T 28-03-2018 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain GO:0016638|GO:0055114 CJD35_RS17860 77daa41343858c7ff6537a015b94b8cd 119 Pfam PF08992 Quinohemoprotein amine dehydrogenase, gamma subunit 48 119 1.4E-36 T 28-03-2018 IPR015084 Quinohemoprotein amine dehydrogenase, gamma subunit, structural domain GO:0016638|GO:0055114 CJD35_RS11735 3f920030e2790658ea4a9379f0305f64 357 TIGRFAM TIGR03019 pepcterm_femAB: FemAB-related protein, PEP-CTERM system-associated 24 357 7.3E-94 T 28-03-2018 IPR017469 PEP-CTERM system-associated, FemAB-related CJD35_RS11735 3f920030e2790658ea4a9379f0305f64 357 SUPERFAMILY SSF55729 162 323 1.48E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS11735 3f920030e2790658ea4a9379f0305f64 357 Pfam PF13480 Acetyltransferase (GNAT) domain 164 288 1.8E-13 T 28-03-2018 CJD35_RS11735 3f920030e2790658ea4a9379f0305f64 357 Gene3D G3DSA:3.40.630.30 18 161 1.1E-13 T 28-03-2018 CJD35_RS11735 3f920030e2790658ea4a9379f0305f64 357 Gene3D G3DSA:3.40.630.30 162 305 1.6E-20 T 28-03-2018 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 Gene3D G3DSA:3.90.930.12 83 177 3.1E-39 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.1E-74 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 Gene3D G3DSA:3.90.930.12 2 82 5.4E-27 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.5E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.5E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.5E-33 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.45 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 Pfam PF00347 Ribosomal protein L6 11 82 9.5E-13 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 Pfam PF00347 Ribosomal protein L6 91 164 3.2E-18 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 SUPERFAMILY SSF56053 83 177 1.76E-36 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 SUPERFAMILY SSF56053 1 82 5.28E-24 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 28-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08625 cd432008449965188d99be9f479f7649 177 PIRSF PIRSF002162 1 177 3.7E-49 T 28-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS00655 f6a0827dbda4e5876d727216de764fd0 171 Pfam PF02130 Uncharacterized protein family UPF0054 15 156 5.6E-34 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CJD35_RS00655 f6a0827dbda4e5876d727216de764fd0 171 Gene3D G3DSA:3.40.390.30 3 167 2.2E-42 T 28-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CJD35_RS00655 f6a0827dbda4e5876d727216de764fd0 171 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 161 21.723 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CJD35_RS00655 f6a0827dbda4e5876d727216de764fd0 171 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 45 157 6.4E-33 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CJD35_RS00655 f6a0827dbda4e5876d727216de764fd0 171 SUPERFAMILY SSF55486 33 163 6.35E-40 T 28-03-2018 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 SUPERFAMILY SSF82714 708 797 1.16E-9 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 SUPERFAMILY SSF82866 795 1020 2.88E-41 T 28-03-2018 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 5.5E-48 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 5.5E-48 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 PRINTS PR00702 Acriflavin resistance protein family signature 386 410 5.5E-48 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 PRINTS PR00702 Acriflavin resistance protein family signature 358 379 5.5E-48 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 PRINTS PR00702 Acriflavin resistance protein family signature 13 37 5.5E-48 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 5.5E-48 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 PRINTS PR00702 Acriflavin resistance protein family signature 41 59 5.5E-48 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 Gene3D G3DSA:3.30.70.1430 43 144 8.3E-27 T 28-03-2018 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 Gene3D G3DSA:3.30.2090.10 183 270 3.9E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 SUPERFAMILY SSF82866 293 492 3.79E-44 T 28-03-2018 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 SUPERFAMILY SSF82693 43 137 1.62E-23 T 28-03-2018 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 SUPERFAMILY SSF82693 270 315 4.71E-9 T 28-03-2018 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 SUPERFAMILY SSF82693 140 184 4.71E-9 T 28-03-2018 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 Gene3D G3DSA:3.30.70.1320 753 837 7.2E-9 T 28-03-2018 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 Gene3D G3DSA:3.30.70.1430 573 659 3.1E-6 T 28-03-2018 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 SUPERFAMILY SSF82714 185 266 3.53E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 Pfam PF00873 AcrB/AcrD/AcrF family 7 1019 2.0E-204 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 Gene3D G3DSA:1.20.1640.10 271 493 3.9E-41 T 28-03-2018 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 Gene3D G3DSA:1.20.1640.10 838 1023 4.6E-30 T 28-03-2018 CJD35_RS03940 cab47809c95ea5a4d4ea6e580fe3e617 1054 Gene3D G3DSA:3.30.70.1440 660 752 0.0011 T 28-03-2018 CJD35_RS10300 03096aaa42c1ad088b5a15179e514f59 229 Pfam PF00440 Bacterial regulatory proteins, tetR family 30 75 1.8E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS10300 03096aaa42c1ad088b5a15179e514f59 229 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 99 206 1.6E-25 T 28-03-2018 CJD35_RS10300 03096aaa42c1ad088b5a15179e514f59 229 SUPERFAMILY SSF46689 17 97 5.13E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS10300 03096aaa42c1ad088b5a15179e514f59 229 SUPERFAMILY SSF48498 96 211 4.89E-23 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS10300 03096aaa42c1ad088b5a15179e514f59 229 Gene3D G3DSA:1.10.357.10 12 216 2.0E-38 T 28-03-2018 CJD35_RS01445 5f2c53675058e73ff804a8529040bfed 309 SUPERFAMILY SSF56349 101 288 1.97E-44 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS01445 5f2c53675058e73ff804a8529040bfed 309 Gene3D G3DSA:1.10.443.10 108 279 9.5E-40 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS01445 5f2c53675058e73ff804a8529040bfed 309 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 84 3.9E-9 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS01445 5f2c53675058e73ff804a8529040bfed 309 SUPERFAMILY SSF47823 4 93 5.1E-18 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CJD35_RS01445 5f2c53675058e73ff804a8529040bfed 309 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 291 47.464 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CJD35_RS01445 5f2c53675058e73ff804a8529040bfed 309 Pfam PF00589 Phage integrase family 121 276 5.7E-37 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS01445 5f2c53675058e73ff804a8529040bfed 309 Gene3D G3DSA:1.10.150.130 5 107 1.6E-13 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Gene3D G3DSA:1.10.460.10 136 318 1.9E-44 T 28-03-2018 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 283 297 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Gene3D G3DSA:2.70.20.10 320 438 1.6E-39 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 SMART SM00437 246 503 1.7E-105 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Gene3D G3DSA:3.40.50.140 1 130 1.8E-38 T 28-03-2018 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Gene3D G3DSA:1.10.460.10 439 556 1.7E-28 T 28-03-2018 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 361 377 3.5E-33 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 163 181 3.5E-33 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 75 88 3.5E-33 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 466 480 3.5E-33 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 288 297 3.5E-33 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 SUPERFAMILY SSF57783 585 622 1.04E-8 T 28-03-2018 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 586 620 3.6E-13 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Pfam PF01131 DNA topoisomerase 129 540 1.3E-124 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Hamap MF_00952 DNA topoisomerase 1 [topA]. 1 709 51.377 T 28-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Pfam PF13368 Topoisomerase C-terminal repeat 639 693 1.8E-10 T 28-03-2018 IPR025589 Topoisomerase C-terminal repeat CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Pfam PF13368 Topoisomerase C-terminal repeat 697 749 5.0E-15 T 28-03-2018 IPR025589 Topoisomerase C-terminal repeat CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Pfam PF13368 Topoisomerase C-terminal repeat 764 816 4.2E-16 T 28-03-2018 IPR025589 Topoisomerase C-terminal repeat CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 3 619 8.8E-218 T 28-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 SMART SM00436 105 193 6.9E-42 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Gene3D G3DSA:3.30.65.10 576 631 1.9E-11 T 28-03-2018 CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 SMART SM00493 1 101 5.3E-29 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 SUPERFAMILY SSF56712 585 593 1.57E-183 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 SUPERFAMILY SSF56712 1 554 1.57E-183 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CJD35_RS12910 47586ea22a6b621ebb18c4ea5a99a9e8 857 Pfam PF01751 Toprim domain 2 114 8.9E-27 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS17935 0bcd2f89f0abeebca661e90a1189eac0 289 Pfam PF08220 DeoR-like helix-turn-helix domain 40 92 4.0E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CJD35_RS17935 0bcd2f89f0abeebca661e90a1189eac0 289 SUPERFAMILY SSF100950 109 267 2.57E-30 T 28-03-2018 CJD35_RS17935 0bcd2f89f0abeebca661e90a1189eac0 289 SMART SM01134 106 267 1.9E-65 T 28-03-2018 CJD35_RS17935 0bcd2f89f0abeebca661e90a1189eac0 289 Gene3D G3DSA:3.40.50.1360 98 285 4.2E-44 T 28-03-2018 CJD35_RS17935 0bcd2f89f0abeebca661e90a1189eac0 289 SMART SM00420 40 92 1.1E-11 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CJD35_RS17935 0bcd2f89f0abeebca661e90a1189eac0 289 Pfam PF00455 DeoR C terminal sensor domain 109 266 8.1E-52 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CJD35_RS17935 0bcd2f89f0abeebca661e90a1189eac0 289 SUPERFAMILY SSF46785 40 104 9.67E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17935 0bcd2f89f0abeebca661e90a1189eac0 289 Gene3D G3DSA:1.10.10.10 30 96 8.1E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17935 0bcd2f89f0abeebca661e90a1189eac0 289 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 72 90 3.7E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CJD35_RS17935 0bcd2f89f0abeebca661e90a1189eac0 289 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 58 72 3.7E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CJD35_RS10660 4e2abd03dd58c728d72dcba2e6524d71 89 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 84 28.08 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS10660 4e2abd03dd58c728d72dcba2e6524d71 89 Pfam PF01016 Ribosomal L27 protein 2 81 1.9E-37 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS10660 4e2abd03dd58c728d72dcba2e6524d71 89 SUPERFAMILY SSF110324 2 81 5.58E-33 T 28-03-2018 CJD35_RS10660 4e2abd03dd58c728d72dcba2e6524d71 89 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 28-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS10660 4e2abd03dd58c728d72dcba2e6524d71 89 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 70 3.0E-16 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS10660 4e2abd03dd58c728d72dcba2e6524d71 89 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 81 1.3E-37 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS10660 4e2abd03dd58c728d72dcba2e6524d71 89 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.8E-35 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS10660 4e2abd03dd58c728d72dcba2e6524d71 89 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.8E-35 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS10660 4e2abd03dd58c728d72dcba2e6524d71 89 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.8E-35 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS10660 4e2abd03dd58c728d72dcba2e6524d71 89 Gene3D G3DSA:2.40.50.100 20 84 5.5E-28 T 28-03-2018 CJD35_RS03010 957102aea5d689c60bff0ffe88c7c76f 231 Hamap MF_00013 Octanoyltransferase [lipB]. 11 217 31.963 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CJD35_RS03010 957102aea5d689c60bff0ffe88c7c76f 231 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 82 134 3.0E-15 T 28-03-2018 CJD35_RS03010 957102aea5d689c60bff0ffe88c7c76f 231 Pfam PF03099 Biotin/lipoate A/B protein ligase family 75 170 6.8E-5 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CJD35_RS03010 957102aea5d689c60bff0ffe88c7c76f 231 PIRSF PIRSF016262 10 219 1.4E-49 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CJD35_RS03010 957102aea5d689c60bff0ffe88c7c76f 231 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 40 193 9.3E-39 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CJD35_RS03010 957102aea5d689c60bff0ffe88c7c76f 231 Gene3D G3DSA:3.30.930.10 11 215 1.8E-56 T 28-03-2018 CJD35_RS03010 957102aea5d689c60bff0ffe88c7c76f 231 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 77 92 - T 28-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CJD35_RS03010 957102aea5d689c60bff0ffe88c7c76f 231 SUPERFAMILY SSF55681 15 215 5.8E-61 T 28-03-2018 CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 207 325 4.5E-10 T 28-03-2018 IPR000014 PAS domain CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 325 487 2.7E-43 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 Pfam PF00563 EAL domain 507 740 5.7E-63 T 28-03-2018 IPR001633 EAL domain CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 SMART SM00267 318 489 1.1E-63 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 SUPERFAMILY SSF55785 223 327 3.7E-15 T 28-03-2018 IPR000014 PAS domain CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 SMART SM00086 278 318 3.1E-4 T 28-03-2018 IPR001610 PAC motif CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 Gene3D G3DSA:3.30.450.20 193 322 8.3E-19 T 28-03-2018 CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 Gene3D G3DSA:3.20.20.450 489 750 6.9E-80 T 28-03-2018 IPR001633 EAL domain CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 SMART SM00052 499 746 2.7E-81 T 28-03-2018 IPR001633 EAL domain CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 SUPERFAMILY SSF141868 508 754 2.35E-71 T 28-03-2018 IPR001633 EAL domain CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 Gene3D G3DSA:3.30.70.270 323 488 7.7E-61 T 28-03-2018 CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 Pfam PF00990 Diguanylate cyclase, GGDEF domain 329 484 4.2E-48 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS08520 137c2df14c113aee9712cbc7be7f032d 762 SUPERFAMILY SSF55073 334 491 1.49E-47 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 SUPERFAMILY SSF55124 1 126 1.54E-30 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 Gene3D G3DSA:3.30.413.10 401 542 1.0E-31 T 28-03-2018 CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 SUPERFAMILY SSF56014 401 542 5.76E-37 T 28-03-2018 CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 Gene3D G3DSA:3.90.480.10 212 398 8.1E-28 T 28-03-2018 CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 Gene3D G3DSA:3.90.480.10 49 186 4.6E-20 T 28-03-2018 CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 SUPERFAMILY SSF56014 120 274 7.85E-46 T 28-03-2018 CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 119 272 1.1E-41 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 445 541 5.0E-12 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 327 392 9.3E-14 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 52 109 1.2E-17 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 SUPERFAMILY SSF55124 251 275 9.32E-26 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS11970 70bc3bbb06b1e2775b66916478be2eac 543 SUPERFAMILY SSF55124 309 415 9.32E-26 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CJD35_RS08255 f7ebdcb1f1f2995d65f7884d46af72de 303 Pfam PF00717 Peptidase S24-like 63 150 2.6E-18 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS08255 f7ebdcb1f1f2995d65f7884d46af72de 303 ProSitePatterns PS00760 Signal peptidases I lysine active site. 129 141 - T 28-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CJD35_RS08255 f7ebdcb1f1f2995d65f7884d46af72de 303 Gene3D G3DSA:2.10.109.10 53 287 1.5E-44 T 28-03-2018 CJD35_RS08255 f7ebdcb1f1f2995d65f7884d46af72de 303 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 43 270 1.8E-38 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJD35_RS08255 f7ebdcb1f1f2995d65f7884d46af72de 303 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 223 242 5.8E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJD35_RS08255 f7ebdcb1f1f2995d65f7884d46af72de 303 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 57 73 5.8E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJD35_RS08255 f7ebdcb1f1f2995d65f7884d46af72de 303 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 127 139 5.8E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJD35_RS08255 f7ebdcb1f1f2995d65f7884d46af72de 303 SUPERFAMILY SSF51306 55 292 2.43E-53 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 287 867 1.8E-231 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 Gene3D G3DSA:2.40.30.10 547 666 4.0E-30 T 28-03-2018 CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 Gene3D G3DSA:3.30.56.50 296 337 5.3E-6 T 28-03-2018 CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 SUPERFAMILY SSF52540 370 542 3.63E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 Pfam PF11987 Translation-initiation factor 2 655 757 8.7E-34 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 866 16.402 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 373 527 6.9E-31 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 13 51 1.4E-9 T 28-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 Gene3D G3DSA:3.40.50.300 364 546 4.1E-38 T 28-03-2018 CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 SUPERFAMILY SSF52156 652 775 1.44E-32 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 294 343 1.6E-13 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 SUPERFAMILY SSF50447 542 626 4.37E-25 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 SUPERFAMILY SSF50447 771 864 2.02E-23 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 Gene3D G3DSA:3.40.50.10050 667 747 3.3E-25 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 Gene3D G3DSA:2.40.30.10 770 867 1.2E-23 T 28-03-2018 CJD35_RS01250 591ccc9c9302addebe97b85a82eb2bb0 868 Pfam PF00009 Elongation factor Tu GTP binding domain 374 530 2.4E-30 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08315 bab47fd68b215f2e76d30bb65550b536 289 SUPERFAMILY SSF53335 6 266 3.64E-49 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS08315 bab47fd68b215f2e76d30bb65550b536 289 Gene3D G3DSA:2.60.40.1180 13 64 1.0E-20 T 28-03-2018 CJD35_RS08315 bab47fd68b215f2e76d30bb65550b536 289 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 89 205 1.2E-11 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CJD35_RS08315 bab47fd68b215f2e76d30bb65550b536 289 Gene3D G3DSA:3.40.50.150 65 280 9.4E-28 T 28-03-2018 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 SMART SM00065 148 321 4.7E-7 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 Pfam PF00360 Phytochrome region 327 505 8.6E-47 T 28-03-2018 IPR013515 Phytochrome, central region GO:0006355|GO:0009584|GO:0018298 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 Pfam PF07536 HWE histidine kinase 527 609 3.6E-22 T 28-03-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 PIRSF PIRSF036397 7 854 0.0 T 28-03-2018 IPR009219 Bacteriophytochrome, CheY-like CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 SUPERFAMILY SSF55781 323 507 1.44E-50 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 SMART SM00448 739 846 0.0061 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 SUPERFAMILY SSF55781 135 317 4.17E-57 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 Pfam PF01590 GAF domain 153 311 3.6E-16 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 Pfam PF08446 PAS fold 18 125 7.0E-16 T 28-03-2018 IPR013654 PAS fold-2 GO:0006355 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 Gene3D G3DSA:3.30.450.20 6 122 3.1E-24 T 28-03-2018 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 Gene3D G3DSA:3.30.450.40 123 315 5.0E-39 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 SMART SM00911 527 609 3.8E-29 T 28-03-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 SUPERFAMILY SSF55785 12 125 5.31E-34 T 28-03-2018 IPR000014 PAS domain CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 Pfam PF00072 Response regulator receiver domain 741 819 5.4E-5 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 SUPERFAMILY SSF52172 737 850 6.69E-15 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 Gene3D G3DSA:3.30.565.10 511 703 9.0E-4 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 Gene3D G3DSA:3.40.50.2300 738 853 2.8E-12 T 28-03-2018 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 PRINTS PR01033 Phytochrome signature 432 451 8.9E-14 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 PRINTS PR01033 Phytochrome signature 163 182 8.9E-14 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 PRINTS PR01033 Phytochrome signature 466 484 8.9E-14 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 CJD35_RS02565 b89f4ed26eb9fccdc48ac860416304e9 854 PRINTS PR01033 Phytochrome signature 249 270 8.9E-14 T 28-03-2018 IPR001294 Phytochrome GO:0006355|GO:0009584 CJD35_RS10125 3fc493a94bc2906389fa0a858d3433e2 236 Gene3D G3DSA:1.10.10.10 130 236 3.3E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10125 3fc493a94bc2906389fa0a858d3433e2 236 SUPERFAMILY SSF46894 129 230 2.13E-22 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS10125 3fc493a94bc2906389fa0a858d3433e2 236 Pfam PF00072 Response regulator receiver domain 6 115 9.1E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS10125 3fc493a94bc2906389fa0a858d3433e2 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 229 4.4E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS10125 3fc493a94bc2906389fa0a858d3433e2 236 SUPERFAMILY SSF52172 3 126 5.98E-41 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS10125 3fc493a94bc2906389fa0a858d3433e2 236 SMART SM00862 154 229 1.5E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS10125 3fc493a94bc2906389fa0a858d3433e2 236 Gene3D G3DSA:3.40.50.2300 1 129 7.1E-36 T 28-03-2018 CJD35_RS10125 3fc493a94bc2906389fa0a858d3433e2 236 SMART SM00448 4 114 1.6E-43 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18060 b28865c76a22a4db25def80261eb11e2 371 Gene3D G3DSA:3.30.66.10 41 106 5.4E-33 T 28-03-2018 IPR035447 DNA topoisomerase I, N-terminal CJD35_RS18060 b28865c76a22a4db25def80261eb11e2 371 SUPERFAMILY SSF56349 104 329 1.32E-70 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS18060 b28865c76a22a4db25def80261eb11e2 371 Gene3D G3DSA:1.20.120.380 259 342 3.5E-30 T 28-03-2018 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 CJD35_RS18060 b28865c76a22a4db25def80261eb11e2 371 Gene3D G3DSA:3.90.15.10 107 253 1.0E-37 T 28-03-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 CJD35_RS18060 b28865c76a22a4db25def80261eb11e2 371 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 107 322 9.3E-36 T 28-03-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 CJD35_RS18060 b28865c76a22a4db25def80261eb11e2 371 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 171 185 4.2E-6 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS18060 b28865c76a22a4db25def80261eb11e2 371 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 148 167 4.2E-6 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS18060 b28865c76a22a4db25def80261eb11e2 371 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 257 271 4.2E-6 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS18060 b28865c76a22a4db25def80261eb11e2 371 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 192 208 4.2E-6 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS18060 b28865c76a22a4db25def80261eb11e2 371 SUPERFAMILY SSF55869 48 109 7.59E-23 T 28-03-2018 IPR035447 DNA topoisomerase I, N-terminal CJD35_RS21180 b28865c76a22a4db25def80261eb11e2 371 Gene3D G3DSA:3.30.66.10 41 106 5.4E-33 T 28-03-2018 IPR035447 DNA topoisomerase I, N-terminal CJD35_RS21180 b28865c76a22a4db25def80261eb11e2 371 SUPERFAMILY SSF56349 104 329 1.32E-70 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS21180 b28865c76a22a4db25def80261eb11e2 371 Gene3D G3DSA:1.20.120.380 259 342 3.5E-30 T 28-03-2018 IPR027362 DNA topoisomerase I catalytic fragment, domain 2 CJD35_RS21180 b28865c76a22a4db25def80261eb11e2 371 Gene3D G3DSA:3.90.15.10 107 253 1.0E-37 T 28-03-2018 IPR014711 DNA topoisomerase I, catalytic core, alpha-helical subdomain, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 CJD35_RS21180 b28865c76a22a4db25def80261eb11e2 371 Pfam PF01028 Eukaryotic DNA topoisomerase I, catalytic core 107 322 9.3E-36 T 28-03-2018 IPR013500 DNA topoisomerase I, catalytic core, eukaryotic-type GO:0003677|GO:0003917|GO:0006265 CJD35_RS21180 b28865c76a22a4db25def80261eb11e2 371 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 171 185 4.2E-6 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS21180 b28865c76a22a4db25def80261eb11e2 371 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 148 167 4.2E-6 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS21180 b28865c76a22a4db25def80261eb11e2 371 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 257 271 4.2E-6 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS21180 b28865c76a22a4db25def80261eb11e2 371 PRINTS PR00416 Eukaryotic DNA topoisomerase I signature 192 208 4.2E-6 T 28-03-2018 IPR001631 DNA topoisomerase I GO:0003677|GO:0003917|GO:0006265 CJD35_RS21180 b28865c76a22a4db25def80261eb11e2 371 SUPERFAMILY SSF55869 48 109 7.59E-23 T 28-03-2018 IPR035447 DNA topoisomerase I, N-terminal CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 SUPERFAMILY SSF48179 191 286 2.21E-30 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 SUPERFAMILY SSF52413 283 387 3.66E-25 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 Gene3D G3DSA:1.20.5.100 194 213 1.3E-13 T 28-03-2018 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 PIRSF PIRSF000124 1 388 1.2E-129 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 191 281 1.6E-27 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 380 4.6E-104 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 Gene3D G3DSA:3.40.50.720 1 193 1.0E-48 T 28-03-2018 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 PIRSF PIRSF500134 338 388 0.045 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 PIRSF PIRSF500134 1 342 1.3E-116 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 SUPERFAMILY SSF51735 1 194 3.46E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 372 3.2E-7 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 8.1E-36 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 Gene3D G3DSA:3.40.50.720 214 381 1.6E-44 T 28-03-2018 CJD35_RS05575 785e63b87df048317accfeaaf7df6b3a 388 SMART SM00984 300 387 4.3E-11 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CJD35_RS07535 7c8fac925cd7b881645197098293deb7 305 SUPERFAMILY SSF53633 15 304 2.62E-90 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CJD35_RS07535 7c8fac925cd7b881645197098293deb7 305 TIGRFAM TIGR00761 argB: acetylglutamate kinase 36 280 2.1E-72 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CJD35_RS07535 7c8fac925cd7b881645197098293deb7 305 PIRSF PIRSF000728 20 305 1.5E-104 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CJD35_RS07535 7c8fac925cd7b881645197098293deb7 305 PRINTS PR00474 Glutamate 5-kinase family signature 66 80 9.5E-10 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CJD35_RS07535 7c8fac925cd7b881645197098293deb7 305 PRINTS PR00474 Glutamate 5-kinase family signature 255 275 9.5E-10 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CJD35_RS07535 7c8fac925cd7b881645197098293deb7 305 PRINTS PR00474 Glutamate 5-kinase family signature 205 232 9.5E-10 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CJD35_RS07535 7c8fac925cd7b881645197098293deb7 305 Hamap MF_00082_B Acetylglutamate kinase [argB]. 33 305 35.918 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CJD35_RS07535 7c8fac925cd7b881645197098293deb7 305 Pfam PF00696 Amino acid kinase family 35 280 6.8E-46 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CJD35_RS07535 7c8fac925cd7b881645197098293deb7 305 Gene3D G3DSA:3.40.1160.10 16 305 2.2E-71 T 28-03-2018 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 1.7E-41 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.7E-41 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 1.7E-41 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 1.7E-41 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 111 124 1.7E-41 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 PIRSF PIRSF000149 1 335 2.7E-134 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 Gene3D G3DSA:3.40.50.720 1 162 6.8E-72 T 28-03-2018 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 5.1E-130 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 SMART SM00846 3 153 1.8E-85 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 SUPERFAMILY SSF51735 4 168 2.37E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 105 4.1E-34 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 314 5.6E-65 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 SUPERFAMILY SSF55347 153 315 8.11E-72 T 28-03-2018 CJD35_RS13250 3e91b44450ae15cbc6ca1c7d2cabd58c 335 Gene3D G3DSA:3.30.360.10 163 316 1.4E-65 T 28-03-2018 CJD35_RS00670 e0abcbf9f3f3bf20ca8805ac36254c4f 133 Pfam PF14464 Prokaryotic homologs of the JAB domain 14 114 2.4E-18 T 28-03-2018 IPR028090 JAB domain, prokaryotic CJD35_RS00670 e0abcbf9f3f3bf20ca8805ac36254c4f 133 SUPERFAMILY SSF102712 2 118 5.1E-23 T 28-03-2018 CJD35_RS00670 e0abcbf9f3f3bf20ca8805ac36254c4f 133 Gene3D G3DSA:3.40.140.10 1 120 2.7E-16 T 28-03-2018 CJD35_RS01050 9ae03158bd347d12c38e9c28a474c921 921 Gene3D G3DSA:3.20.19.10 168 387 1.5E-17 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJD35_RS01050 9ae03158bd347d12c38e9c28a474c921 921 Gene3D G3DSA:3.30.499.10 731 918 3.9E-32 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS01050 9ae03158bd347d12c38e9c28a474c921 921 SUPERFAMILY SSF74778 4 166 1.18E-41 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CJD35_RS01050 9ae03158bd347d12c38e9c28a474c921 921 Pfam PF00330 Aconitase family (aconitate hydratase) 411 895 3.3E-60 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS01050 9ae03158bd347d12c38e9c28a474c921 921 Gene3D G3DSA:3.40.1060.10 560 718 1.1E-20 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS01050 9ae03158bd347d12c38e9c28a474c921 921 Gene3D G3DSA:3.30.499.10 394 559 8.1E-17 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS01050 9ae03158bd347d12c38e9c28a474c921 921 Pfam PF06434 Aconitate hydratase 2 N-terminus 176 406 2.6E-65 T 28-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CJD35_RS01050 9ae03158bd347d12c38e9c28a474c921 921 Pfam PF11791 Aconitate B N-terminal domain 6 162 5.6E-41 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CJD35_RS01050 9ae03158bd347d12c38e9c28a474c921 921 SUPERFAMILY SSF53732 403 915 3.66E-70 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS01050 9ae03158bd347d12c38e9c28a474c921 921 SUPERFAMILY SSF52016 170 394 9.68E-33 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 471 8.3E-171 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 Gene3D G3DSA:3.30.390.30 367 470 5.1E-35 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 Gene3D G3DSA:3.50.50.60 155 277 9.8E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 3.0E-35 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 Gene3D G3DSA:3.50.50.60 1 154 2.4E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 SUPERFAMILY SSF51905 2 336 5.18E-67 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 326 6.1E-67 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 Gene3D G3DSA:3.50.50.60 278 366 2.0E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 SUPERFAMILY SSF55424 348 470 3.26E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 4.9E-67 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 4.9E-67 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 199 4.9E-67 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 4.9E-67 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 4.9E-67 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 4.9E-67 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 4.9E-67 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 4.9E-67 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 4.9E-67 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 5.3E-38 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 174 192 5.3E-38 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 5.3E-38 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 5.3E-38 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 5.3E-38 T 28-03-2018 CJD35_RS13410 fe31ee40a4646b27033ec962dbd965c1 471 PIRSF PIRSF000350 1 466 3.1E-85 T 28-03-2018 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 SUPERFAMILY SSF140356 15 114 3.01E-34 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 16 688 5.1E-277 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 Pfam PF13089 Polyphosphate kinase N-terminal domain 17 121 1.3E-34 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 Gene3D G3DSA:1.20.58.310 19 121 1.5E-32 T 28-03-2018 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 SUPERFAMILY SSF143724 128 317 7.26E-51 T 28-03-2018 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 SUPERFAMILY SSF56024 505 687 2.24E-67 T 28-03-2018 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 Gene3D G3DSA:3.30.1840.10 122 310 2.6E-49 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 Pfam PF13090 Polyphosphate kinase C-terminal domain 335 686 6.6E-148 T 28-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 Hamap MF_00347 Polyphosphate kinase [ppk]. 15 691 27.897 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 PIRSF PIRSF015589 2 701 2.0E-253 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 Gene3D G3DSA:3.30.870.10 327 504 9.9E-17 T 28-03-2018 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 Gene3D G3DSA:3.30.870.10 505 694 7.5E-36 T 28-03-2018 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 SUPERFAMILY SSF56024 322 499 3.14E-52 T 28-03-2018 CJD35_RS07520 dd87adbbfd5503a1d13a62b32202ed02 712 Pfam PF02503 Polyphosphate kinase middle domain 133 325 3.2E-54 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CJD35_RS07905 44a6603d8dd784daa89eec25ace97ce1 454 SMART SM00304 183 236 7.3E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJD35_RS07905 44a6603d8dd784daa89eec25ace97ce1 454 SUPERFAMILY SSF47384 220 302 1.61E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS07905 44a6603d8dd784daa89eec25ace97ce1 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 441 5.6E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS07905 44a6603d8dd784daa89eec25ace97ce1 454 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 302 2.9E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS07905 44a6603d8dd784daa89eec25ace97ce1 454 Gene3D G3DSA:3.30.565.10 309 452 1.5E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS07905 44a6603d8dd784daa89eec25ace97ce1 454 SUPERFAMILY SSF55874 294 442 1.7E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS07905 44a6603d8dd784daa89eec25ace97ce1 454 SMART SM00388 237 302 1.9E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS07905 44a6603d8dd784daa89eec25ace97ce1 454 Gene3D G3DSA:1.10.287.130 218 298 1.3E-8 T 28-03-2018 CJD35_RS07905 44a6603d8dd784daa89eec25ace97ce1 454 SMART SM00387 347 454 2.2E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS07905 44a6603d8dd784daa89eec25ace97ce1 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 4.0E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS07905 44a6603d8dd784daa89eec25ace97ce1 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 4.0E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS16415 5077d6168c4a47ce5de07c1c84055212 189 SMART SM00347 52 153 5.3E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS16415 5077d6168c4a47ce5de07c1c84055212 189 Pfam PF01047 MarR family 60 117 1.7E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS16415 5077d6168c4a47ce5de07c1c84055212 189 SUPERFAMILY SSF46785 34 170 2.1E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16415 5077d6168c4a47ce5de07c1c84055212 189 Gene3D G3DSA:1.10.10.10 16 174 2.2E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17635 ccd042600990472895bae1216b9be7ca 394 Gene3D G3DSA:3.40.47.10 266 391 2.3E-36 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS17635 ccd042600990472895bae1216b9be7ca 394 Pfam PF00108 Thiolase, N-terminal domain 6 263 2.5E-82 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CJD35_RS17635 ccd042600990472895bae1216b9be7ca 394 Gene3D G3DSA:3.40.47.10 3 265 5.2E-52 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS17635 ccd042600990472895bae1216b9be7ca 394 Pfam PF02803 Thiolase, C-terminal domain 272 392 1.5E-44 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CJD35_RS17635 ccd042600990472895bae1216b9be7ca 394 SUPERFAMILY SSF53901 272 392 1.47E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS17635 ccd042600990472895bae1216b9be7ca 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 392 6.7E-124 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS17635 ccd042600990472895bae1216b9be7ca 394 SUPERFAMILY SSF53901 6 270 2.64E-74 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS17635 ccd042600990472895bae1216b9be7ca 394 PIRSF PIRSF000429 1 394 3.7E-109 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS17635 ccd042600990472895bae1216b9be7ca 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CJD35_RS07435 fb0de45f69ea18db56489ba4d45e4871 284 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 16 33 1.6E-29 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CJD35_RS07435 fb0de45f69ea18db56489ba4d45e4871 284 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 194 211 1.6E-29 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CJD35_RS07435 fb0de45f69ea18db56489ba4d45e4871 284 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 236 254 1.6E-29 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CJD35_RS07435 fb0de45f69ea18db56489ba4d45e4871 284 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 92 113 1.6E-29 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CJD35_RS07435 fb0de45f69ea18db56489ba4d45e4871 284 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 156 176 1.6E-29 T 28-03-2018 IPR005511 Senescence marker protein-30 (SMP-30) CJD35_RS07435 fb0de45f69ea18db56489ba4d45e4871 284 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 15 254 7.6E-72 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region CJD35_RS07435 fb0de45f69ea18db56489ba4d45e4871 284 Gene3D G3DSA:2.120.10.30 16 282 7.6E-31 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS07435 fb0de45f69ea18db56489ba4d45e4871 284 SUPERFAMILY SSF63829 11 282 3.05E-61 T 28-03-2018 CJD35_RS10750 c0c925b5152540373f401c109fad478c 305 Pfam PF00892 EamA-like transporter family 160 290 1.3E-8 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS10750 c0c925b5152540373f401c109fad478c 305 Pfam PF00892 EamA-like transporter family 21 149 2.3E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS10750 c0c925b5152540373f401c109fad478c 305 SUPERFAMILY SSF103481 201 291 4.58E-8 T 28-03-2018 CJD35_RS10750 c0c925b5152540373f401c109fad478c 305 SUPERFAMILY SSF103481 54 152 1.96E-13 T 28-03-2018 CJD35_RS13205 9c34d31db60890ef1ae129df1946926d 259 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 32 105 2.4E-27 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CJD35_RS13205 9c34d31db60890ef1ae129df1946926d 259 Gene3D G3DSA:1.10.287.1080 8 125 2.8E-37 T 28-03-2018 CJD35_RS13205 9c34d31db60890ef1ae129df1946926d 259 SUPERFAMILY SSF101386 141 233 8.78E-22 T 28-03-2018 CJD35_RS13205 9c34d31db60890ef1ae129df1946926d 259 TIGRFAM TIGR00444 mazG: MazG family protein 15 253 7.1E-91 T 28-03-2018 IPR011551 NTP pyrophosphohydrolase MazG CJD35_RS13205 9c34d31db60890ef1ae129df1946926d 259 SUPERFAMILY SSF101386 9 107 1.87E-23 T 28-03-2018 CJD35_RS13205 9c34d31db60890ef1ae129df1946926d 259 Gene3D G3DSA:1.10.287.1080 141 258 3.9E-23 T 28-03-2018 CJD35_RS11160 1c6be9d8623f79b36cf5874a6c90312c 323 Pfam PF02618 YceG-like family 39 312 3.6E-73 T 28-03-2018 IPR003770 Endolytic murein transglycosylase CJD35_RS11160 1c6be9d8623f79b36cf5874a6c90312c 323 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 125 315 4.1E-51 T 28-03-2018 IPR003770 Endolytic murein transglycosylase CJD35_RS11160 1c6be9d8623f79b36cf5874a6c90312c 323 Gene3D G3DSA:3.30.160.60 287 320 6.9E-14 T 28-03-2018 CJD35_RS11160 1c6be9d8623f79b36cf5874a6c90312c 323 Gene3D G3DSA:3.30.160.60 71 104 5.5E-4 T 28-03-2018 CJD35_RS11160 1c6be9d8623f79b36cf5874a6c90312c 323 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 7 318 30.324 T 28-03-2018 IPR003770 Endolytic murein transglycosylase CJD35_RS20315 c458b2e5d247764a6645b32181234a10 462 Gene3D G3DSA:2.40.160.10 44 417 8.0E-13 T 28-03-2018 CJD35_RS20315 c458b2e5d247764a6645b32181234a10 462 Pfam PF13372 Alginate export 44 446 3.1E-74 T 28-03-2018 IPR025388 Alginate export domain CJD35_RS19135 c458b2e5d247764a6645b32181234a10 462 Gene3D G3DSA:2.40.160.10 44 417 8.0E-13 T 28-03-2018 CJD35_RS19135 c458b2e5d247764a6645b32181234a10 462 Pfam PF13372 Alginate export 44 446 3.1E-74 T 28-03-2018 IPR025388 Alginate export domain CJD35_RS19520 418638aba90d23d5e71fbc7c11a4666f 128 Gene3D G3DSA:3.40.50.720 1 125 1.4E-37 T 28-03-2018 CJD35_RS19520 418638aba90d23d5e71fbc7c11a4666f 128 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 1 93 9.1E-35 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CJD35_RS19520 418638aba90d23d5e71fbc7c11a4666f 128 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 33 49 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJD35_RS19520 418638aba90d23d5e71fbc7c11a4666f 128 SUPERFAMILY SSF51735 2 94 2.04E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS01520 8034a2f26de800da2c3ee69e25f4aeb8 241 SUPERFAMILY SSF53633 4 236 9.56E-74 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CJD35_RS01520 8034a2f26de800da2c3ee69e25f4aeb8 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 7 237 8.9E-102 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CJD35_RS01520 8034a2f26de800da2c3ee69e25f4aeb8 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 237 44.519 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CJD35_RS01520 8034a2f26de800da2c3ee69e25f4aeb8 241 Pfam PF00696 Amino acid kinase family 7 216 1.5E-32 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CJD35_RS01520 8034a2f26de800da2c3ee69e25f4aeb8 241 PIRSF PIRSF005650 1 241 3.3E-94 T 28-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CJD35_RS01520 8034a2f26de800da2c3ee69e25f4aeb8 241 Gene3D G3DSA:3.40.1160.10 2 238 2.2E-47 T 28-03-2018 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 34 229 2.2E-22 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 272 343 6.0E-36 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 8 332 35.93 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 Gene3D G3DSA:3.30.1360.10 7 93 1.3E-19 T 28-03-2018 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 Gene3D G3DSA:3.30.1360.10 119 232 3.0E-24 T 28-03-2018 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 29 332 1.7E-113 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 SUPERFAMILY SSF55257 8 58 2.2E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 SUPERFAMILY SSF55257 180 232 2.2E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 SMART SM00662 28 235 2.9E-93 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 SUPERFAMILY SSF56553 58 179 1.01E-40 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 Gene3D G3DSA:1.10.150.20 260 343 7.0E-27 T 28-03-2018 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 261 323 1.8E-25 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 64 159 4.7E-21 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS06785 5be0e9bdb18e4f66be3f114a3f3dad35 354 SUPERFAMILY SSF47789 265 341 4.97E-27 T 28-03-2018 CJD35_RS13395 cbf5818463bae96e125179d30d24df8a 470 SUPERFAMILY SSF54368 4 102 9.02E-34 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJD35_RS13395 cbf5818463bae96e125179d30d24df8a 470 Pfam PF00120 Glutamine synthetase, catalytic domain 105 467 1.1E-132 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJD35_RS13395 cbf5818463bae96e125179d30d24df8a 470 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 97 3.5E-29 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJD35_RS13395 cbf5818463bae96e125179d30d24df8a 470 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 7 469 1.1E-191 T 28-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJD35_RS13395 cbf5818463bae96e125179d30d24df8a 470 Gene3D G3DSA:3.30.590.10 107 457 4.8E-116 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CJD35_RS13395 cbf5818463bae96e125179d30d24df8a 470 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 28-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CJD35_RS13395 cbf5818463bae96e125179d30d24df8a 470 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 387 399 - T 28-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJD35_RS13395 cbf5818463bae96e125179d30d24df8a 470 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 260 275 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CJD35_RS13395 cbf5818463bae96e125179d30d24df8a 470 SUPERFAMILY SSF55931 105 469 1.86E-131 T 28-03-2018 CJD35_RS13395 cbf5818463bae96e125179d30d24df8a 470 Gene3D G3DSA:3.10.20.70 4 106 1.9E-25 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJD35_RS13395 cbf5818463bae96e125179d30d24df8a 470 SMART SM01230 104 380 3.7E-140 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJD35_RS11990 fc08b0c477b46e4227cf83ab7bb00f5b 474 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 18 378 3.2E-115 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 438 455 3.3E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 455 475 3.3E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 SMART SM00382 164 307 3.3E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 Pfam PF00072 Response regulator receiver domain 7 116 1.4E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 Gene3D G3DSA:3.40.50.300 142 315 3.0E-28 T 28-03-2018 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 SUPERFAMILY SSF52172 6 187 7.97E-39 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 SMART SM00448 5 116 2.0E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 SUPERFAMILY SSF52540 144 386 6.37E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 471 7.2E-171 T 28-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 Gene3D G3DSA:1.10.10.60 384 475 4.4E-13 T 28-03-2018 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 356 365 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 Gene3D G3DSA:1.10.8.60 317 383 2.8E-23 T 28-03-2018 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 Pfam PF02954 Bacterial regulatory protein, Fis family 432 472 7.0E-10 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 Pfam PF00158 Sigma-54 interaction domain 144 310 2.0E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 SUPERFAMILY SSF46689 356 475 2.73E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS14110 cd20903caa2af484210c346f2490f619 483 Gene3D G3DSA:3.40.50.2300 2 136 1.5E-27 T 28-03-2018 CJD35_RS17360 cc3babc63594c5a3dd797c4d5a4d9e06 358 SUPERFAMILY SSF56219 34 335 3.24E-32 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS17360 cc3babc63594c5a3dd797c4d5a4d9e06 358 Gene3D G3DSA:3.60.10.10 34 338 2.0E-26 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS00770 236be2e975cae4bb876af099a5dc695d 214 Gene3D G3DSA:1.20.120.80 28 213 8.3E-51 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS00770 236be2e975cae4bb876af099a5dc695d 214 Pfam PF00510 Cytochrome c oxidase subunit III 35 211 5.6E-13 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS00770 236be2e975cae4bb876af099a5dc695d 214 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 35 213 4.4E-80 T 28-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 CJD35_RS00770 236be2e975cae4bb876af099a5dc695d 214 SUPERFAMILY SSF81452 26 211 1.57E-56 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS06845 18b64928aa2d48d096ac75ac4517dea0 265 Gene3D G3DSA:3.90.226.10 7 222 1.3E-54 T 28-03-2018 CJD35_RS06845 18b64928aa2d48d096ac75ac4517dea0 265 Gene3D G3DSA:1.10.12.10 223 265 2.5E-15 T 28-03-2018 IPR014748 Crontonase, C-terminal CJD35_RS06845 18b64928aa2d48d096ac75ac4517dea0 265 SUPERFAMILY SSF52096 5 264 1.96E-76 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS06845 18b64928aa2d48d096ac75ac4517dea0 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 264 6.9E-54 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS06845 18b64928aa2d48d096ac75ac4517dea0 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 SUPERFAMILY SSF55874 330 490 1.06E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 Gene3D G3DSA:3.30.450.20 115 253 2.5E-26 T 28-03-2018 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 SUPERFAMILY SSF55785 142 256 1.61E-28 T 28-03-2018 IPR000014 PAS domain CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 254 2.1E-35 T 28-03-2018 IPR000014 PAS domain CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 491 1.3E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 334 8.0E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 Gene3D G3DSA:1.10.287.130 254 334 3.2E-7 T 28-03-2018 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 Gene3D G3DSA:3.30.565.10 341 497 1.9E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 SMART SM00091 131 197 8.2E-12 T 28-03-2018 IPR000014 PAS domain CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 Gene3D G3DSA:1.20.120.620 19 114 0.0011 T 28-03-2018 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 SMART SM00388 269 339 4.1E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 SUPERFAMILY SSF47384 266 334 7.85E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 2.3E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 2.3E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 2.3E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 2.3E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 Pfam PF00989 PAS fold 132 243 6.2E-19 T 28-03-2018 IPR013767 PAS fold GO:0006355 CJD35_RS18080 d0d58efdef8af8599df1839050186caa 500 SMART SM00387 381 492 1.0E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 SUPERFAMILY SSF55874 330 490 1.06E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 Gene3D G3DSA:3.30.450.20 115 253 2.5E-26 T 28-03-2018 CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 SUPERFAMILY SSF55785 142 256 1.61E-28 T 28-03-2018 IPR000014 PAS domain CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 128 254 2.1E-35 T 28-03-2018 IPR000014 PAS domain CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 491 1.3E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 334 8.0E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 Gene3D G3DSA:1.10.287.130 254 334 3.2E-7 T 28-03-2018 CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 Gene3D G3DSA:3.30.565.10 341 497 1.9E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 SMART SM00091 131 197 8.2E-12 T 28-03-2018 IPR000014 PAS domain CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 Gene3D G3DSA:1.20.120.620 19 114 0.0011 T 28-03-2018 CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 SMART SM00388 269 339 4.1E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 SUPERFAMILY SSF47384 266 334 7.85E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 2.3E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 451 2.3E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 437 2.3E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 2.3E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 Pfam PF00989 PAS fold 132 243 6.2E-19 T 28-03-2018 IPR013767 PAS fold GO:0006355 CJD35_RS21200 d0d58efdef8af8599df1839050186caa 500 SMART SM00387 381 492 1.0E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 59 2.3E-11 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 PRINTS PR00996 Glutamate methyltransferase family signature 208 222 4.7E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 PRINTS PR00996 Glutamate methyltransferase family signature 134 150 4.7E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 4.7E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 PRINTS PR00996 Glutamate methyltransferase family signature 102 122 4.7E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 PRINTS PR00996 Glutamate methyltransferase family signature 227 250 4.7E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 74 254 8.9E-36 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 SUPERFAMILY SSF47757 5 72 4.71E-7 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 SMART SM00138 7 270 2.3E-28 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 SUPERFAMILY SSF53335 74 253 5.64E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 Gene3D G3DSA:1.10.155.10 4 71 2.6E-6 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CJD35_RS18505 68f36c467b95247761d839cbe7aa4457 274 Gene3D G3DSA:3.40.50.150 72 272 2.2E-35 T 28-03-2018 CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 Pfam PF03705 CheR methyltransferase, all-alpha domain 10 59 2.3E-11 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 PRINTS PR00996 Glutamate methyltransferase family signature 208 222 4.7E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 PRINTS PR00996 Glutamate methyltransferase family signature 134 150 4.7E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 PRINTS PR00996 Glutamate methyltransferase family signature 66 78 4.7E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 PRINTS PR00996 Glutamate methyltransferase family signature 102 122 4.7E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 PRINTS PR00996 Glutamate methyltransferase family signature 227 250 4.7E-23 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 Pfam PF01739 CheR methyltransferase, SAM binding domain 74 254 8.9E-36 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 SUPERFAMILY SSF47757 5 72 4.71E-7 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 SMART SM00138 7 270 2.3E-28 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 SUPERFAMILY SSF53335 74 253 5.64E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 Gene3D G3DSA:1.10.155.10 4 71 2.6E-6 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CJD35_RS20735 68f36c467b95247761d839cbe7aa4457 274 Gene3D G3DSA:3.40.50.150 72 272 2.2E-35 T 28-03-2018 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 Pfam PF00330 Aconitase family (aconitate hydratase) 70 538 3.1E-145 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 Gene3D G3DSA:3.30.499.10 360 552 5.2E-55 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 Gene3D G3DSA:3.40.1060.10 228 359 5.5E-38 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 PRINTS PR00415 Aconitase family signature 407 418 1.0E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 PRINTS PR00415 Aconitase family signature 205 220 1.0E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 PRINTS PR00415 Aconitase family signature 281 294 1.0E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 PRINTS PR00415 Aconitase family signature 360 374 1.0E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 PRINTS PR00415 Aconitase family signature 162 170 1.0E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 PRINTS PR00415 Aconitase family signature 469 482 1.0E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 PRINTS PR00415 Aconitase family signature 138 151 1.0E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 PRINTS PR00415 Aconitase family signature 191 204 1.0E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 PRINTS PR00415 Aconitase family signature 267 280 1.0E-26 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 Pfam PF00694 Aconitase C-terminal domain 664 794 2.3E-29 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 Gene3D G3DSA:3.20.19.10 626 866 2.3E-65 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 Gene3D G3DSA:3.30.499.10 3 227 1.7E-57 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 SUPERFAMILY SSF52016 601 864 1.02E-65 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 SUPERFAMILY SSF53732 21 595 6.8E-180 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17065 99f8c34eee21d5de64a62d1511024d43 872 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 2 866 0.0 T 28-03-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 CJD35_RS06285 4497e5b1b0728cf8c50f5439e1f2f720 243 Pfam PF00378 Enoyl-CoA hydratase/isomerase 2 197 3.1E-34 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS06285 4497e5b1b0728cf8c50f5439e1f2f720 243 Gene3D G3DSA:3.90.226.10 1 243 4.1E-48 T 28-03-2018 CJD35_RS06285 4497e5b1b0728cf8c50f5439e1f2f720 243 SUPERFAMILY SSF52096 1 238 7.18E-53 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS02840 f4e78e74937adb4133de4181a3049286 694 Pfam PF01103 Surface antigen 380 694 2.7E-42 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CJD35_RS02840 f4e78e74937adb4133de4181a3049286 694 Gene3D G3DSA:2.40.160.50 322 694 3.9E-62 T 28-03-2018 CJD35_RS02840 f4e78e74937adb4133de4181a3049286 694 Gene3D G3DSA:3.10.20.310 204 281 2.5E-5 T 28-03-2018 CJD35_RS02840 f4e78e74937adb4133de4181a3049286 694 Gene3D G3DSA:3.10.20.310 39 203 0.057 T 28-03-2018 CJD35_RS12590 8b661f4b0793228fc8934d9bdc8aa8f7 516 Pfam PF09423 PhoD-like phosphatase 145 484 5.3E-95 T 28-03-2018 IPR018946 Alkaline phosphatase D-related CJD35_RS12590 8b661f4b0793228fc8934d9bdc8aa8f7 516 SUPERFAMILY SSF56300 142 489 6.5E-27 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS12590 8b661f4b0793228fc8934d9bdc8aa8f7 516 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 36 132 2.6E-29 T 28-03-2018 IPR032093 Phospholipase D, N-terminal CJD35_RS12590 8b661f4b0793228fc8934d9bdc8aa8f7 516 Gene3D G3DSA:2.60.40.380 33 136 3.1E-4 T 28-03-2018 CJD35_RS12590 8b661f4b0793228fc8934d9bdc8aa8f7 516 Gene3D G3DSA:3.60.21.10 141 510 1.5E-40 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS04460 e02ad25b4375ede7b723e28b34537e21 587 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 21 564 2.2E-196 T 28-03-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 CJD35_RS04460 e02ad25b4375ede7b723e28b34537e21 587 Gene3D G3DSA:3.40.50.300 327 567 6.3E-56 T 28-03-2018 CJD35_RS04460 e02ad25b4375ede7b723e28b34537e21 587 Pfam PF00664 ABC transporter transmembrane region 32 284 3.6E-12 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJD35_RS04460 e02ad25b4375ede7b723e28b34537e21 587 SUPERFAMILY SSF90123 19 324 5.36E-38 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJD35_RS04460 e02ad25b4375ede7b723e28b34537e21 587 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS04460 e02ad25b4375ede7b723e28b34537e21 587 SMART SM00382 363 544 2.4E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS04460 e02ad25b4375ede7b723e28b34537e21 587 Pfam PF00005 ABC transporter 355 502 6.7E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS04460 e02ad25b4375ede7b723e28b34537e21 587 Gene3D G3DSA:1.20.1560.10 14 323 4.3E-20 T 28-03-2018 CJD35_RS04460 e02ad25b4375ede7b723e28b34537e21 587 SUPERFAMILY SSF52540 328 563 3.06E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.7E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.7E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 5.7E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 5.7E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 5.7E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 5.7E-32 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 SUPERFAMILY SSF51735 2 245 4.16E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 7 243 2.2E-53 T 28-03-2018 CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 Gene3D G3DSA:3.40.50.720 1 244 2.6E-63 T 28-03-2018 CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 7.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 7.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15570 1056c848f14f143540ad48f9e192185b 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 7.0E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS07500 0513049dd95678efac2a7547df66f04b 316 Gene3D G3DSA:3.40.50.170 1 196 1.3E-59 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJD35_RS07500 0513049dd95678efac2a7547df66f04b 316 SUPERFAMILY SSF142906 198 304 2.22E-10 T 28-03-2018 CJD35_RS07500 0513049dd95678efac2a7547df66f04b 316 Pfam PF00551 Formyl transferase 5 182 2.6E-51 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJD35_RS07500 0513049dd95678efac2a7547df66f04b 316 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 190 6.3E-58 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CJD35_RS07500 0513049dd95678efac2a7547df66f04b 316 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 5 189 27.218 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CJD35_RS07500 0513049dd95678efac2a7547df66f04b 316 SUPERFAMILY SSF53328 5 190 9.81E-57 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJD35_RS07500 0513049dd95678efac2a7547df66f04b 316 Pfam PF04237 YjbR 205 299 6.9E-12 T 28-03-2018 IPR007351 Uncharacterised protein YjbR CJD35_RS06350 c295be0af9a577bdc1768b086a1bd102 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 397 8.0E-124 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS06350 c295be0af9a577bdc1768b086a1bd102 400 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CJD35_RS06350 c295be0af9a577bdc1768b086a1bd102 400 SUPERFAMILY SSF53901 1 272 1.32E-66 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06350 c295be0af9a577bdc1768b086a1bd102 400 PIRSF PIRSF000429 1 399 1.9E-115 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS06350 c295be0af9a577bdc1768b086a1bd102 400 Pfam PF00108 Thiolase, N-terminal domain 5 268 6.6E-59 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CJD35_RS06350 c295be0af9a577bdc1768b086a1bd102 400 Pfam PF02803 Thiolase, C-terminal domain 278 397 1.2E-43 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CJD35_RS06350 c295be0af9a577bdc1768b086a1bd102 400 SUPERFAMILY SSF53901 278 397 3.15E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06350 c295be0af9a577bdc1768b086a1bd102 400 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CJD35_RS06350 c295be0af9a577bdc1768b086a1bd102 400 Gene3D G3DSA:3.40.47.10 1 145 2.9E-28 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06350 c295be0af9a577bdc1768b086a1bd102 400 Gene3D G3DSA:3.40.47.10 274 396 1.3E-27 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06350 c295be0af9a577bdc1768b086a1bd102 400 Gene3D G3DSA:3.40.47.10 146 273 3.1E-18 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS05570 eb5251c14e428c10197fc7ee6b5d5a84 270 Gene3D G3DSA:2.60.120.10 158 260 0.0054 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS05570 eb5251c14e428c10197fc7ee6b5d5a84 270 PIRSF PIRSF036894 1 40 0.011 T 28-03-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 CJD35_RS05570 eb5251c14e428c10197fc7ee6b5d5a84 270 PIRSF PIRSF036894 37 259 3.2E-50 T 28-03-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 CJD35_RS05570 eb5251c14e428c10197fc7ee6b5d5a84 270 SUPERFAMILY SSF51182 3 256 1.3E-54 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS05570 eb5251c14e428c10197fc7ee6b5d5a84 270 Gene3D G3DSA:2.60.120.10 38 157 1.2E-28 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS02525 3f6a6b81c633b29ecc635319ab098997 595 Pfam PF00990 Diguanylate cyclase, GGDEF domain 433 589 4.3E-37 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS02525 3f6a6b81c633b29ecc635319ab098997 595 Gene3D G3DSA:3.30.450.20 292 424 2.3E-25 T 28-03-2018 CJD35_RS02525 3f6a6b81c633b29ecc635319ab098997 595 Pfam PF05231 MASE1 19 290 3.1E-27 T 28-03-2018 IPR007895 MASE1 CJD35_RS02525 3f6a6b81c633b29ecc635319ab098997 595 Gene3D G3DSA:3.30.70.270 425 595 1.0E-50 T 28-03-2018 CJD35_RS02525 3f6a6b81c633b29ecc635319ab098997 595 SUPERFAMILY SSF55073 438 592 4.79E-41 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS02525 3f6a6b81c633b29ecc635319ab098997 595 SUPERFAMILY SSF55785 294 420 9.16E-22 T 28-03-2018 IPR000014 PAS domain CJD35_RS02525 3f6a6b81c633b29ecc635319ab098997 595 SMART SM00091 307 373 7.7E-9 T 28-03-2018 IPR000014 PAS domain CJD35_RS02525 3f6a6b81c633b29ecc635319ab098997 595 Pfam PF08448 PAS fold 314 421 1.8E-11 T 28-03-2018 IPR013656 PAS fold-4 CJD35_RS02525 3f6a6b81c633b29ecc635319ab098997 595 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 304 429 6.3E-17 T 28-03-2018 IPR000014 PAS domain CJD35_RS02525 3f6a6b81c633b29ecc635319ab098997 595 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 429 593 1.7E-40 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS02525 3f6a6b81c633b29ecc635319ab098997 595 SMART SM00267 422 594 2.9E-55 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS12705 de4f701541b38f64890aff1e4e402938 161 PRINTS PR00502 NUDIX hydrolase family signature 54 69 5.3E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CJD35_RS12705 de4f701541b38f64890aff1e4e402938 161 PRINTS PR00502 NUDIX hydrolase family signature 40 54 5.3E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CJD35_RS12705 de4f701541b38f64890aff1e4e402938 161 SUPERFAMILY SSF55811 10 158 8.8E-32 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJD35_RS12705 de4f701541b38f64890aff1e4e402938 161 Pfam PF00293 NUDIX domain 12 152 7.6E-27 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CJD35_RS12705 de4f701541b38f64890aff1e4e402938 161 Gene3D G3DSA:3.90.79.10 6 161 1.9E-33 T 28-03-2018 CJD35_RS12705 de4f701541b38f64890aff1e4e402938 161 ProSitePatterns PS00893 Nudix box signature. 45 66 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CJD35_RS12705 de4f701541b38f64890aff1e4e402938 161 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 6 161 32.812 T 28-03-2018 IPR022927 RNA pyrophosphohydrolase RppH CJD35_RS19370 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.10.10.60 138 169 1.5E-10 T 28-03-2018 CJD35_RS19370 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.10.260.40 170 232 8.2E-4 T 28-03-2018 CJD35_RS19370 791e700537e5859678312d91f7c006e7 288 Pfam PF02796 Helix-turn-helix domain of resolvase 140 178 4.0E-8 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS19370 791e700537e5859678312d91f7c006e7 288 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS19370 791e700537e5859678312d91f7c006e7 288 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS19370 791e700537e5859678312d91f7c006e7 288 SMART SM00857 3 138 1.9E-43 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS19370 791e700537e5859678312d91f7c006e7 288 SUPERFAMILY SSF46689 140 179 4.0E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS19370 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.20.5.40 107 136 2.4E-13 T 28-03-2018 CJD35_RS19370 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:3.40.50.1390 1 106 5.9E-25 T 28-03-2018 CJD35_RS19370 791e700537e5859678312d91f7c006e7 288 SUPERFAMILY SSF53041 4 138 3.27E-36 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS19370 791e700537e5859678312d91f7c006e7 288 Pfam PF00239 Resolvase, N terminal domain 4 138 2.0E-35 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS22245 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.10.10.60 138 169 1.5E-10 T 28-03-2018 CJD35_RS22245 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.10.260.40 170 232 8.2E-4 T 28-03-2018 CJD35_RS22245 791e700537e5859678312d91f7c006e7 288 Pfam PF02796 Helix-turn-helix domain of resolvase 140 178 4.0E-8 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS22245 791e700537e5859678312d91f7c006e7 288 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS22245 791e700537e5859678312d91f7c006e7 288 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS22245 791e700537e5859678312d91f7c006e7 288 SMART SM00857 3 138 1.9E-43 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS22245 791e700537e5859678312d91f7c006e7 288 SUPERFAMILY SSF46689 140 179 4.0E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS22245 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.20.5.40 107 136 2.4E-13 T 28-03-2018 CJD35_RS22245 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:3.40.50.1390 1 106 5.9E-25 T 28-03-2018 CJD35_RS22245 791e700537e5859678312d91f7c006e7 288 SUPERFAMILY SSF53041 4 138 3.27E-36 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS22245 791e700537e5859678312d91f7c006e7 288 Pfam PF00239 Resolvase, N terminal domain 4 138 2.0E-35 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21650 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.10.10.60 138 169 1.5E-10 T 28-03-2018 CJD35_RS21650 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.10.260.40 170 232 8.2E-4 T 28-03-2018 CJD35_RS21650 791e700537e5859678312d91f7c006e7 288 Pfam PF02796 Helix-turn-helix domain of resolvase 140 178 4.0E-8 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21650 791e700537e5859678312d91f7c006e7 288 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS21650 791e700537e5859678312d91f7c006e7 288 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS21650 791e700537e5859678312d91f7c006e7 288 SMART SM00857 3 138 1.9E-43 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21650 791e700537e5859678312d91f7c006e7 288 SUPERFAMILY SSF46689 140 179 4.0E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS21650 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.20.5.40 107 136 2.4E-13 T 28-03-2018 CJD35_RS21650 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:3.40.50.1390 1 106 5.9E-25 T 28-03-2018 CJD35_RS21650 791e700537e5859678312d91f7c006e7 288 SUPERFAMILY SSF53041 4 138 3.27E-36 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21650 791e700537e5859678312d91f7c006e7 288 Pfam PF00239 Resolvase, N terminal domain 4 138 2.0E-35 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21145 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.10.10.60 138 169 1.5E-10 T 28-03-2018 CJD35_RS21145 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.10.260.40 170 232 8.2E-4 T 28-03-2018 CJD35_RS21145 791e700537e5859678312d91f7c006e7 288 Pfam PF02796 Helix-turn-helix domain of resolvase 140 178 4.0E-8 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21145 791e700537e5859678312d91f7c006e7 288 ProSitePatterns PS00398 Site-specific recombinases signature 2. 57 69 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS21145 791e700537e5859678312d91f7c006e7 288 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS21145 791e700537e5859678312d91f7c006e7 288 SMART SM00857 3 138 1.9E-43 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21145 791e700537e5859678312d91f7c006e7 288 SUPERFAMILY SSF46689 140 179 4.0E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS21145 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:1.20.5.40 107 136 2.4E-13 T 28-03-2018 CJD35_RS21145 791e700537e5859678312d91f7c006e7 288 Gene3D G3DSA:3.40.50.1390 1 106 5.9E-25 T 28-03-2018 CJD35_RS21145 791e700537e5859678312d91f7c006e7 288 SUPERFAMILY SSF53041 4 138 3.27E-36 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21145 791e700537e5859678312d91f7c006e7 288 Pfam PF00239 Resolvase, N terminal domain 4 138 2.0E-35 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS12555 2b3b73e07ecfb91c1f5a0117dad04573 692 SUPERFAMILY SSF56601 254 608 1.16E-87 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS12555 2b3b73e07ecfb91c1f5a0117dad04573 692 SUPERFAMILY SSF56519 60 253 2.49E-45 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CJD35_RS12555 2b3b73e07ecfb91c1f5a0117dad04573 692 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 22 605 5.7E-198 T 28-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 CJD35_RS12555 2b3b73e07ecfb91c1f5a0117dad04573 692 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 239 6.9E-40 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CJD35_RS12555 2b3b73e07ecfb91c1f5a0117dad04573 692 Pfam PF00905 Penicillin binding protein transpeptidase domain 271 585 3.5E-57 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CJD35_RS12555 2b3b73e07ecfb91c1f5a0117dad04573 692 Gene3D G3DSA:3.90.1310.10 36 249 6.0E-44 T 28-03-2018 CJD35_RS12555 2b3b73e07ecfb91c1f5a0117dad04573 692 Gene3D G3DSA:3.40.710.10 250 611 2.6E-78 T 28-03-2018 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 439 7.1E-125 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 SUPERFAMILY SSF103491 15 435 2.09E-126 T 28-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 278 297 7.7E-87 T 28-03-2018 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 186 209 7.7E-87 T 28-03-2018 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 120 143 7.7E-87 T 28-03-2018 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 326 348 7.7E-87 T 28-03-2018 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 7.7E-87 T 28-03-2018 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 413 431 7.7E-87 T 28-03-2018 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 7.7E-87 T 28-03-2018 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 160 185 7.7E-87 T 28-03-2018 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 PRINTS PR00303 Preprotein translocase SecY subunit signature 381 399 7.7E-87 T 28-03-2018 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 Pfam PF00344 SecY translocase 80 428 3.1E-110 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 PIRSF PIRSF004557 6 452 4.6E-117 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 444 28.272 T 28-03-2018 IPR026593 Protein translocase subunit SecY CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 Gene3D G3DSA:1.10.3370.10 12 450 3.3E-149 T 28-03-2018 CJD35_RS08650 fd6ab0adba15f589d78d61dcce483dc8 454 ProSitePatterns PS00756 Protein secY signature 2. 179 196 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CJD35_RS06520 3f4b59ba1e1087477dfb5e6350900626 310 SUPERFAMILY SSF54593 2 275 1.29E-33 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS06520 3f4b59ba1e1087477dfb5e6350900626 310 TIGRFAM TIGR03211 catechol_2_3: catechol 2,3 dioxygenase 6 310 3.1E-105 T 28-03-2018 IPR017624 Catechol 2,3 dioxygenase GO:0008198|GO:0018577|GO:0019439|GO:0055114 KEGG: 00361+1.13.11.2|KEGG: 00362+1.13.11.2|KEGG: 00622+1.13.11.2|KEGG: 00643+1.13.11.2|MetaCyc: PWY-5419|MetaCyc: PWY-5641 CJD35_RS06520 3f4b59ba1e1087477dfb5e6350900626 310 Gene3D G3DSA:3.10.180.10 1 151 2.6E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS06520 3f4b59ba1e1087477dfb5e6350900626 310 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 247 268 - T 28-03-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 CJD35_RS06520 3f4b59ba1e1087477dfb5e6350900626 310 Gene3D G3DSA:3.10.180.10 152 309 1.1E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS06520 3f4b59ba1e1087477dfb5e6350900626 310 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 152 269 2.9E-13 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS12285 0c6c336103cccfc937118801b58dad76 157 Gene3D G3DSA:1.10.10.10 1 146 9.1E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12285 0c6c336103cccfc937118801b58dad76 157 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 124 1.2E-30 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CJD35_RS12285 0c6c336103cccfc937118801b58dad76 157 SUPERFAMILY SSF46785 2 128 3.13E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12285 0c6c336103cccfc937118801b58dad76 157 Pfam PF02082 Transcriptional regulator 1 80 3.7E-25 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 5 460 1.1E-208 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 Gene3D G3DSA:1.10.275.10 2 137 4.0E-57 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 Pfam PF10415 Fumarase C C-terminus 409 461 3.4E-22 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 Gene3D G3DSA:1.20.200.10 138 415 1.2E-87 T 28-03-2018 CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 Gene3D G3DSA:1.10.40.30 416 461 8.0E-22 T 28-03-2018 CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 5.6E-35 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 5.6E-35 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 5.6E-35 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 5.6E-35 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 SUPERFAMILY SSF48557 4 461 5.97E-144 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 461 83.985 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 PRINTS PR00145 Argininosuccinate lyase family signature 133 155 2.1E-6 T 28-03-2018 CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 PRINTS PR00145 Argininosuccinate lyase family signature 175 195 2.1E-6 T 28-03-2018 CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 2.1E-6 T 28-03-2018 CJD35_RS08460 5017ad869306ff13e97cf9ec301e3799 461 Pfam PF00206 Lyase 12 343 8.2E-111 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CJD35_RS02370 33bc412937311a7e82c29995e4a0ab1c 131 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 15 103 1.0E-8 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CJD35_RS02370 33bc412937311a7e82c29995e4a0ab1c 131 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 106 11.793 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CJD35_RS02370 33bc412937311a7e82c29995e4a0ab1c 131 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 12 105 1.0E-15 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CJD35_RS02370 33bc412937311a7e82c29995e4a0ab1c 131 Gene3D G3DSA:3.30.230.10 1 112 3.1E-24 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJD35_RS02370 33bc412937311a7e82c29995e4a0ab1c 131 Pfam PF00825 Ribonuclease P 3 103 1.9E-20 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CJD35_RS02370 33bc412937311a7e82c29995e4a0ab1c 131 SUPERFAMILY SSF54211 3 105 1.57E-22 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS06465 4283836c0219013488bc4282246a42dc 271 SUPERFAMILY SSF52266 78 266 2.17E-18 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CJD35_RS06465 4283836c0219013488bc4282246a42dc 271 Gene3D G3DSA:3.40.50.1110 61 269 1.5E-15 T 28-03-2018 CJD35_RS04765 dc1a02ce61836afdd2983be9aadd48a9 418 Gene3D G3DSA:1.25.40.10 68 131 2.9E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS04765 dc1a02ce61836afdd2983be9aadd48a9 418 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 224 389 2.0E-42 T 28-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 CJD35_RS04765 dc1a02ce61836afdd2983be9aadd48a9 418 Gene3D G3DSA:2.60.120.330 215 414 1.4E-50 T 28-03-2018 IPR027443 Isopenicillin N synthase-like CJD35_RS04765 dc1a02ce61836afdd2983be9aadd48a9 418 Gene3D G3DSA:1.25.40.10 1 67 9.8E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS04765 dc1a02ce61836afdd2983be9aadd48a9 418 SUPERFAMILY SSF51197 308 390 2.75E-15 T 28-03-2018 CJD35_RS04765 dc1a02ce61836afdd2983be9aadd48a9 418 SUPERFAMILY SSF48452 3 152 2.18E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS06470 950dcf1a8b61913c5bf83cf9f32f7222 235 Pfam PF02525 Flavodoxin-like fold 1 208 1.1E-39 T 28-03-2018 IPR003680 Flavodoxin-like fold CJD35_RS06470 950dcf1a8b61913c5bf83cf9f32f7222 235 Gene3D G3DSA:3.40.50.360 1 226 4.0E-39 T 28-03-2018 IPR029039 Flavoprotein-like domain CJD35_RS06470 950dcf1a8b61913c5bf83cf9f32f7222 235 SUPERFAMILY SSF52218 1 214 1.42E-51 T 28-03-2018 IPR029039 Flavoprotein-like domain CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.1E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 SMART SM00838 598 685 1.0E-54 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 Gene3D G3DSA:2.40.30.10 288 398 6.5E-29 T 28-03-2018 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 Gene3D G3DSA:3.30.230.10 490 611 1.9E-39 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 Pfam PF00009 Elongation factor Tu GTP binding domain 10 281 8.1E-68 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 Gene3D G3DSA:3.30.70.240 612 689 9.2E-32 T 28-03-2018 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 Pfam PF14492 Elongation Factor G, domain II 402 475 1.3E-33 T 28-03-2018 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 Gene3D G3DSA:3.40.50.300 1 286 8.0E-59 T 28-03-2018 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 SUPERFAMILY SSF52540 6 281 2.19E-108 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 SUPERFAMILY SSF50447 264 402 1.7E-33 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 Pfam PF03764 Elongation factor G, domain IV 477 595 1.8E-41 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 Gene3D G3DSA:3.30.70.870 399 489 6.0E-35 T 28-03-2018 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 Pfam PF00679 Elongation factor G C-terminus 599 684 2.9E-31 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 SUPERFAMILY SSF54980 400 478 4.68E-24 T 28-03-2018 IPR035647 EF-G domain III/V-like CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 181 1.5E-32 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 SMART SM00889 478 596 7.2E-60 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 SUPERFAMILY SSF54980 601 686 2.88E-30 T 28-03-2018 IPR035647 EF-G domain III/V-like CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 107.326 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 688 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 SUPERFAMILY SSF54211 477 596 7.59E-40 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS08535 f0528720bf12a0222f961083ec3f61b9 690 Pfam PF03144 Elongation factor Tu domain 2 323 389 1.5E-13 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CJD35_RS17390 f88f186b2b55203d65b5be614edbb2f9 305 Pfam PF01048 Phosphorylase superfamily 29 301 5.8E-46 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJD35_RS17390 f88f186b2b55203d65b5be614edbb2f9 305 Gene3D G3DSA:3.40.50.1580 23 303 5.0E-48 T 28-03-2018 CJD35_RS17390 f88f186b2b55203d65b5be614edbb2f9 305 SUPERFAMILY SSF53167 173 301 8.28E-42 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJD35_RS17390 f88f186b2b55203d65b5be614edbb2f9 305 SUPERFAMILY SSF53167 29 143 8.28E-42 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJD35_RS16760 e4115279a5796c615e086e10737182ea 482 Pfam PF00171 Aldehyde dehydrogenase family 26 476 6.9E-169 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS16760 e4115279a5796c615e086e10737182ea 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS16760 e4115279a5796c615e086e10737182ea 482 Gene3D G3DSA:3.40.605.10 10 271 8.3E-100 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS16760 e4115279a5796c615e086e10737182ea 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS16760 e4115279a5796c615e086e10737182ea 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 29 475 1.2E-216 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CJD35_RS16760 e4115279a5796c615e086e10737182ea 482 SUPERFAMILY SSF53720 7 479 2.36E-167 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS16760 e4115279a5796c615e086e10737182ea 482 Gene3D G3DSA:3.40.309.10 272 463 6.3E-71 T 28-03-2018 CJD35_RS12595 a2cea26fe8e3a5ddbf2a30f055404aa1 177 Gene3D G3DSA:3.40.470.10 15 177 1.1E-37 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS12595 a2cea26fe8e3a5ddbf2a30f055404aa1 177 SMART SM00986 21 173 1.4E-10 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS12595 a2cea26fe8e3a5ddbf2a30f055404aa1 177 Pfam PF03167 Uracil DNA glycosylase superfamily 22 172 1.3E-10 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS12595 a2cea26fe8e3a5ddbf2a30f055404aa1 177 SUPERFAMILY SSF52141 20 176 1.83E-29 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS12595 a2cea26fe8e3a5ddbf2a30f055404aa1 177 SMART SM00987 21 173 1.4E-10 T 28-03-2018 CJD35_RS12595 a2cea26fe8e3a5ddbf2a30f055404aa1 177 TIGRFAM TIGR04274 hypoxanDNAglyco: DNA-deoxyinosine glycosylase 20 169 2.6E-41 T 28-03-2018 IPR026353 Hypoxanthine-DNA glycosylase CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 Gene3D G3DSA:3.40.50.300 394 627 5.0E-17 T 28-03-2018 CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 721 22.848 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 SMART SM00487 186 382 1.2E-17 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 SUPERFAMILY SSF52540 491 607 7.32E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 SUPERFAMILY SSF52540 214 263 7.32E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 Pfam PF00271 Helicase conserved C-terminal domain 519 584 1.8E-4 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 Gene3D G3DSA:3.40.50.300 173 374 1.2E-24 T 28-03-2018 CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 SUPERFAMILY SSF52540 52 85 1.57E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 SUPERFAMILY SSF52540 187 366 1.57E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 TIGRFAM TIGR00595 priA: primosomal protein N' 214 719 6.0E-182 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 Pfam PF00270 DEAD/DEAH box helicase 214 355 1.7E-13 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJD35_RS09780 d6fe1dc88b1f343698f6dae2c2cd057e 722 SMART SM00490 488 585 0.0084 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 SMART SM00482 683 886 1.0E-96 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 Pfam PF01612 3'-5' exonuclease 322 512 3.5E-30 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 SUPERFAMILY SSF53098 322 512 2.28E-43 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 Gene3D G3DSA:3.30.70.370 747 926 1.9E-47 T 28-03-2018 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 Gene3D G3DSA:3.30.70.370 654 740 2.0E-13 T 28-03-2018 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 SMART SM00474 322 514 3.2E-27 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 SUPERFAMILY SSF47807 172 287 6.58E-31 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 SMART SM00475 4 263 4.8E-121 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 SUPERFAMILY SSF88723 4 171 1.86E-51 T 28-03-2018 IPR029060 PIN domain-like CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 675 690 9.1E-61 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 854 9.1E-61 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 869 882 9.1E-61 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 652 674 9.1E-61 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 747 772 9.1E-61 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 806 817 9.1E-61 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 697 720 9.1E-61 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 PRINTS PR00868 DNA-polymerase family A (pol I) signature 784 795 9.1E-61 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 Gene3D G3DSA:1.10.150.20 181 245 2.1E-28 T 28-03-2018 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 SMART SM00279 174 209 1.6E-15 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 SUPERFAMILY SSF56672 522 926 9.01E-139 T 28-03-2018 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 ProSitePatterns PS00447 DNA polymerase family A signature. 747 766 - T 28-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 Pfam PF00476 DNA polymerase family A 546 923 1.6E-138 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 Gene3D G3DSA:1.20.1060.10 539 653 1.5E-31 T 28-03-2018 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 265 2.9E-29 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 Gene3D G3DSA:3.40.50.1010 4 180 4.9E-65 T 28-03-2018 IPR029060 PIN domain-like CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 TIGRFAM TIGR00593 pola: DNA polymerase I 6 926 2.5E-266 T 28-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 170 8.7E-51 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CJD35_RS07470 7168a1ba8715b2db4c9634f8c2ff0297 926 Gene3D G3DSA:3.30.420.10 313 538 7.1E-42 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS02090 7878b97322b59217ee4a2263d39f73b1 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 41 8.7E-6 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS02090 7878b97322b59217ee4a2263d39f73b1 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.79 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS02090 7878b97322b59217ee4a2263d39f73b1 41 Pfam PF00444 Ribosomal protein L36 1 41 1.9E-15 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS02090 7878b97322b59217ee4a2263d39f73b1 41 SUPERFAMILY SSF57840 1 41 8.11E-12 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS21340 7f030ef2d666465fa6fd66075ea92e60 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 1.9E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS21340 7f030ef2d666465fa6fd66075ea92e60 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CJD35_RS21340 7f030ef2d666465fa6fd66075ea92e60 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 2.7E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS21340 7f030ef2d666465fa6fd66075ea92e60 369 SUPERFAMILY SSF51735 161 333 4.76E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS21340 7f030ef2d666465fa6fd66075ea92e60 369 Gene3D G3DSA:3.40.50.720 189 311 3.5E-25 T 28-03-2018 CJD35_RS21340 7f030ef2d666465fa6fd66075ea92e60 369 SUPERFAMILY SSF50129 1 185 6.39E-71 T 28-03-2018 IPR011032 GroES-like CJD35_RS21340 7f030ef2d666465fa6fd66075ea92e60 369 SMART SM00829 12 367 5.2E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS21340 7f030ef2d666465fa6fd66075ea92e60 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 4.8E-221 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CJD35_RS21340 7f030ef2d666465fa6fd66075ea92e60 369 Gene3D G3DSA:3.90.180.10 1 188 3.9E-59 T 28-03-2018 CJD35_RS21340 7f030ef2d666465fa6fd66075ea92e60 369 Gene3D G3DSA:3.90.180.10 312 369 1.2E-5 T 28-03-2018 CJD35_RS21340 7f030ef2d666465fa6fd66075ea92e60 369 SUPERFAMILY SSF50129 318 369 1.33E-11 T 28-03-2018 IPR011032 GroES-like CJD35_RS18220 7f030ef2d666465fa6fd66075ea92e60 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 1.9E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS18220 7f030ef2d666465fa6fd66075ea92e60 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CJD35_RS18220 7f030ef2d666465fa6fd66075ea92e60 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 2.7E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS18220 7f030ef2d666465fa6fd66075ea92e60 369 SUPERFAMILY SSF51735 161 333 4.76E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS18220 7f030ef2d666465fa6fd66075ea92e60 369 Gene3D G3DSA:3.40.50.720 189 311 3.5E-25 T 28-03-2018 CJD35_RS18220 7f030ef2d666465fa6fd66075ea92e60 369 SUPERFAMILY SSF50129 1 185 6.39E-71 T 28-03-2018 IPR011032 GroES-like CJD35_RS18220 7f030ef2d666465fa6fd66075ea92e60 369 SMART SM00829 12 367 5.2E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS18220 7f030ef2d666465fa6fd66075ea92e60 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 4.8E-221 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CJD35_RS18220 7f030ef2d666465fa6fd66075ea92e60 369 Gene3D G3DSA:3.90.180.10 1 188 3.9E-59 T 28-03-2018 CJD35_RS18220 7f030ef2d666465fa6fd66075ea92e60 369 Gene3D G3DSA:3.90.180.10 312 369 1.2E-5 T 28-03-2018 CJD35_RS18220 7f030ef2d666465fa6fd66075ea92e60 369 SUPERFAMILY SSF50129 318 369 1.33E-11 T 28-03-2018 IPR011032 GroES-like CJD35_RS06795 061098aa4641f151390a284909340427 723 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 547 577 - T 28-03-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 CJD35_RS06795 061098aa4641f151390a284909340427 723 SUPERFAMILY SSF50993 35 451 4.45E-87 T 28-03-2018 CJD35_RS06795 061098aa4641f151390a284909340427 723 SUPERFAMILY SSF53474 455 710 1.53E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS06795 061098aa4641f151390a284909340427 723 Gene3D G3DSA:3.40.50.1820 35 255 3.4E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS06795 061098aa4641f151390a284909340427 723 Gene3D G3DSA:3.40.50.1820 256 717 2.4E-62 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS06795 061098aa4641f151390a284909340427 723 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 38 443 2.7E-102 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CJD35_RS06795 061098aa4641f151390a284909340427 723 Pfam PF00326 Prolyl oligopeptidase family 503 714 1.9E-61 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CJD35_RS06795 061098aa4641f151390a284909340427 723 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 540 559 6.8E-58 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS06795 061098aa4641f151390a284909340427 723 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 486 504 6.8E-58 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS06795 061098aa4641f151390a284909340427 723 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 570 590 6.8E-58 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS06795 061098aa4641f151390a284909340427 723 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 644 666 6.8E-58 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS06795 061098aa4641f151390a284909340427 723 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 625 640 6.8E-58 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS06795 061098aa4641f151390a284909340427 723 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 512 536 6.8E-58 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS17545 23ade625a3521b2d4553e84ea225f905 91 SMART SM00411 1 90 1.1E-33 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS17545 23ade625a3521b2d4553e84ea225f905 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-29 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS17545 23ade625a3521b2d4553e84ea225f905 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.6E-11 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS17545 23ade625a3521b2d4553e84ea225f905 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.6E-11 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS17545 23ade625a3521b2d4553e84ea225f905 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.6E-11 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS17545 23ade625a3521b2d4553e84ea225f905 91 SUPERFAMILY SSF47729 1 90 5.0E-27 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS17545 23ade625a3521b2d4553e84ea225f905 91 Gene3D G3DSA:4.10.520.10 1 91 1.9E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 SUPERFAMILY SSF53633 3 248 1.57E-68 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 Gene3D G3DSA:3.40.1160.10 1 240 4.8E-61 T 28-03-2018 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 SUPERFAMILY SSF55021 342 417 2.19E-23 T 28-03-2018 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 PIRSF PIRSF000726 59 421 8.9E-123 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 PIRSF PIRSF000726 1 62 2.0E-18 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 SUPERFAMILY SSF55021 260 338 1.29E-17 T 28-03-2018 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 Gene3D G3DSA:3.30.70.260 342 414 4.1E-21 T 28-03-2018 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 Gene3D G3DSA:3.30.70.260 241 341 1.2E-25 T 28-03-2018 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 Pfam PF13840 ACT domain 351 411 5.8E-15 T 28-03-2018 IPR027795 GATS-like ACT domain CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 62 414 6.3E-108 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 PRINTS PR00474 Glutamate 5-kinase family signature 204 224 1.4E-5 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 1.4E-5 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 1.4E-5 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 Pfam PF00696 Amino acid kinase family 3 229 7.5E-43 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CJD35_RS02190 9ecc8eb5b88fa1a05b9bb724042a8b94 421 Pfam PF01842 ACT domain 277 338 2.3E-12 T 28-03-2018 IPR002912 ACT domain CJD35_RS21470 483938c14d6c4757988c8c7e665a2a54 233 Gene3D G3DSA:3.40.50.2300 1 124 2.1E-33 T 28-03-2018 CJD35_RS21470 483938c14d6c4757988c8c7e665a2a54 233 Gene3D G3DSA:1.10.10.10 125 228 2.0E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21470 483938c14d6c4757988c8c7e665a2a54 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 5.8E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS21470 483938c14d6c4757988c8c7e665a2a54 233 Pfam PF00072 Response regulator receiver domain 3 113 8.4E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS21470 483938c14d6c4757988c8c7e665a2a54 233 SMART SM00448 1 112 3.7E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS21470 483938c14d6c4757988c8c7e665a2a54 233 SMART SM00862 145 221 5.8E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS21470 483938c14d6c4757988c8c7e665a2a54 233 SUPERFAMILY SSF52172 1 173 6.4E-37 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS18350 483938c14d6c4757988c8c7e665a2a54 233 Gene3D G3DSA:3.40.50.2300 1 124 2.1E-33 T 28-03-2018 CJD35_RS18350 483938c14d6c4757988c8c7e665a2a54 233 Gene3D G3DSA:1.10.10.10 125 228 2.0E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS18350 483938c14d6c4757988c8c7e665a2a54 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 5.8E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS18350 483938c14d6c4757988c8c7e665a2a54 233 Pfam PF00072 Response regulator receiver domain 3 113 8.4E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18350 483938c14d6c4757988c8c7e665a2a54 233 SMART SM00448 1 112 3.7E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18350 483938c14d6c4757988c8c7e665a2a54 233 SMART SM00862 145 221 5.8E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS18350 483938c14d6c4757988c8c7e665a2a54 233 SUPERFAMILY SSF52172 1 173 6.4E-37 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS15485 8b644f400a9e5c680bbbe875935a3733 245 TIGRFAM TIGR01916 F420_cofE: coenzyme F420-0:L-glutamate ligase 2 244 7.5E-71 T 28-03-2018 IPR008225 Coenzyme F420:L-glutamate ligase GO:0043773|GO:0046872|GO:0051188 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 CJD35_RS15485 8b644f400a9e5c680bbbe875935a3733 245 Gene3D G3DSA:3.30.1330.100 136 229 2.0E-21 T 28-03-2018 CJD35_RS15485 8b644f400a9e5c680bbbe875935a3733 245 Gene3D G3DSA:3.90.1660.10 55 135 1.5E-27 T 28-03-2018 CJD35_RS15485 8b644f400a9e5c680bbbe875935a3733 245 Pfam PF01996 F420-0:Gamma-glutamyl ligase 11 222 1.8E-51 T 28-03-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 CJD35_RS15485 8b644f400a9e5c680bbbe875935a3733 245 SUPERFAMILY SSF144010 2 244 3.79E-71 T 28-03-2018 CJD35_RS16420 a4d6d87e21d7e3563c5d0fc17ed66f33 133 SUPERFAMILY SSF54427 2 113 1.59E-11 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS16420 a4d6d87e21d7e3563c5d0fc17ed66f33 133 Gene3D G3DSA:3.10.450.50 2 125 1.3E-11 T 28-03-2018 CJD35_RS16420 a4d6d87e21d7e3563c5d0fc17ed66f33 133 Pfam PF12680 SnoaL-like domain 7 123 2.1E-8 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 202 458 18.424 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 Pfam PF03853 YjeF-related protein N-terminus 30 180 6.7E-27 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 Gene3D G3DSA:3.40.1190.20 203 460 4.7E-40 T 28-03-2018 IPR029056 Ribokinase-like CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 292 302 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 7 201 7.6E-30 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 219 450 3.0E-48 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 402 412 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 SUPERFAMILY SSF53613 210 457 4.26E-53 T 28-03-2018 IPR029056 Ribokinase-like CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 201 20.126 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 SUPERFAMILY SSF64153 6 227 2.88E-48 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 PIRSF PIRSF017184 5 459 4.4E-78 T 28-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 Pfam PF01256 Carbohydrate kinase 229 443 1.0E-44 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CJD35_RS12835 2fd0d0fbabbc8ab51eb11ec92105697e 461 Gene3D G3DSA:3.40.50.10260 2 202 2.9E-49 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CJD35_RS00540 e719d96530293c756a9f96f0ba8468bd 254 Gene3D G3DSA:3.30.360.10 129 222 1.0E-33 T 28-03-2018 CJD35_RS00540 e719d96530293c756a9f96f0ba8468bd 254 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 112 4.1E-22 T 28-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS00540 e719d96530293c756a9f96f0ba8468bd 254 PIRSF PIRSF000161 1 254 5.7E-77 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS00540 e719d96530293c756a9f96f0ba8468bd 254 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 3 253 1.5E-64 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS00540 e719d96530293c756a9f96f0ba8468bd 254 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 116 252 1.4E-39 T 28-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS00540 e719d96530293c756a9f96f0ba8468bd 254 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 253 30.704 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS00540 e719d96530293c756a9f96f0ba8468bd 254 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 138 155 - T 28-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS00540 e719d96530293c756a9f96f0ba8468bd 254 SUPERFAMILY SSF51735 224 254 2.61E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS00540 e719d96530293c756a9f96f0ba8468bd 254 SUPERFAMILY SSF51735 2 114 2.61E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS00540 e719d96530293c756a9f96f0ba8468bd 254 SUPERFAMILY SSF55347 115 224 1.81E-35 T 28-03-2018 CJD35_RS00540 e719d96530293c756a9f96f0ba8468bd 254 Gene3D G3DSA:3.40.50.720 1 128 1.6E-19 T 28-03-2018 CJD35_RS00785 b5a64ad6f587c5a37e435cbaad6a1813 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 428 1.1E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS00785 b5a64ad6f587c5a37e435cbaad6a1813 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 409 1.1E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS00785 b5a64ad6f587c5a37e435cbaad6a1813 441 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 375 1.1E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS00785 b5a64ad6f587c5a37e435cbaad6a1813 441 Gene3D G3DSA:3.30.565.10 288 432 1.5E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS00785 b5a64ad6f587c5a37e435cbaad6a1813 441 SUPERFAMILY SSF55874 288 430 1.31E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS00785 b5a64ad6f587c5a37e435cbaad6a1813 441 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 331 430 7.6E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS00785 b5a64ad6f587c5a37e435cbaad6a1813 441 SUPERFAMILY SSF47384 205 278 1.0E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS00785 b5a64ad6f587c5a37e435cbaad6a1813 441 SMART SM00387 326 431 4.3E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS00785 b5a64ad6f587c5a37e435cbaad6a1813 441 Gene3D G3DSA:1.10.287.130 201 280 0.0015 T 28-03-2018 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 28-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 Gene3D G3DSA:3.40.50.1980 27 226 1.3E-83 T 28-03-2018 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 Pfam PF00815 Histidinol dehydrogenase 24 428 1.1E-163 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 PIRSF PIRSF000099 3 429 5.9E-155 T 28-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 PRINTS PR00083 Histidinol dehydrogenase signature 34 58 7.2E-79 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 7.2E-79 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 PRINTS PR00083 Histidinol dehydrogenase signature 137 163 7.2E-79 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 PRINTS PR00083 Histidinol dehydrogenase signature 171 197 7.2E-79 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 PRINTS PR00083 Histidinol dehydrogenase signature 201 226 7.2E-79 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 7.2E-79 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 7.2E-79 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 7.2E-79 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 Gene3D G3DSA:3.40.50.1980 227 372 4.8E-66 T 28-03-2018 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 34 427 2.0E-155 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 6 428 40.243 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CJD35_RS03990 1fb56350d713e14092f967c99a487c7a 429 SUPERFAMILY SSF53720 20 428 5.69E-80 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS00845 ee5a8b40545eff83cda564aa9d56d5de 308 Gene3D G3DSA:1.10.10.10 4 86 1.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS00845 ee5a8b40545eff83cda564aa9d56d5de 308 Pfam PF03466 LysR substrate binding domain 93 298 2.4E-43 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS00845 ee5a8b40545eff83cda564aa9d56d5de 308 SUPERFAMILY SSF46785 4 116 2.16E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS00845 ee5a8b40545eff83cda564aa9d56d5de 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS00845 ee5a8b40545eff83cda564aa9d56d5de 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS00845 ee5a8b40545eff83cda564aa9d56d5de 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS00845 ee5a8b40545eff83cda564aa9d56d5de 308 Gene3D G3DSA:3.40.190.10 93 184 4.0E-19 T 28-03-2018 CJD35_RS00845 ee5a8b40545eff83cda564aa9d56d5de 308 SUPERFAMILY SSF53850 93 300 3.02E-37 T 28-03-2018 CJD35_RS00845 ee5a8b40545eff83cda564aa9d56d5de 308 Gene3D G3DSA:3.40.190.10 185 273 1.1E-16 T 28-03-2018 CJD35_RS00845 ee5a8b40545eff83cda564aa9d56d5de 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 6.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 SUPERFAMILY SSF51905 3 369 7.77E-68 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PIRSF PIRSF000350 1 462 1.3E-90 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 SUPERFAMILY SSF55424 344 466 1.07E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 Gene3D G3DSA:3.30.390.30 336 463 8.3E-38 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 Gene3D G3DSA:3.50.50.60 1 171 9.6E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.9E-76 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 2.9E-76 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 2.9E-76 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 138 147 2.9E-76 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.9E-76 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 176 201 2.9E-76 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 2.9E-76 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 2.9E-76 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 2.9E-76 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 329 3.4E-78 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 7.8E-37 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 176 194 3.6E-43 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 3.6E-43 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.6E-43 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 3.6E-43 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 135 153 3.6E-43 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 Gene3D G3DSA:3.40.50.720 172 335 2.4E-41 T 28-03-2018 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CJD35_RS01585 c5c91492e6d4750d45ed6636c230aa81 466 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 466 1.9E-164 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 SUPERFAMILY SSF56091 231 422 1.23E-51 T 28-03-2018 CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 SUPERFAMILY SSF50249 425 538 1.71E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 Gene3D G3DSA:3.30.1490.70 371 412 8.4E-11 T 28-03-2018 CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 TIGRFAM TIGR02777 LigD_PE_dom: DNA ligase D, 3'-phosphoesterase domain 7 162 1.3E-67 T 28-03-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 Gene3D G3DSA:2.40.50.140 413 535 5.8E-27 T 28-03-2018 CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 Pfam PF04679 ATP dependent DNA ligase C terminal region 441 533 4.6E-22 T 28-03-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 237 539 2.4E-98 T 28-03-2018 IPR014146 DNA ligase D, ligase domain CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 Pfam PF13298 DNA polymerase Ligase (LigD) 37 142 2.7E-38 T 28-03-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 553 798 2.5E-93 T 28-03-2018 IPR014145 DNA ligase D, polymerase domain CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 Gene3D G3DSA:3.30.470.30 202 370 1.1E-38 T 28-03-2018 CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 246 819 5.0E-194 T 28-03-2018 IPR014143 DNA ligase D CJD35_RS17965 c6162d3c0e142d457ebea958a90ff638 834 Pfam PF01068 ATP dependent DNA ligase domain 239 422 3.5E-30 T 28-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 CJD35_RS04210 b6448ed5c3dde63765e46d784a56050c 296 Pfam PF01841 Transglutaminase-like superfamily 147 246 6.2E-21 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS04210 b6448ed5c3dde63765e46d784a56050c 296 Gene3D G3DSA:3.90.260.10 142 254 4.6E-7 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS04210 b6448ed5c3dde63765e46d784a56050c 296 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 3 81 1.2E-19 T 28-03-2018 IPR013589 Bacterial transglutaminase-like, N-terminal CJD35_RS04210 b6448ed5c3dde63765e46d784a56050c 296 SUPERFAMILY SSF54001 7 276 1.74E-40 T 28-03-2018 CJD35_RS04210 b6448ed5c3dde63765e46d784a56050c 296 SMART SM00460 177 248 3.7E-15 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS12840 b5dfbcad10165202557783608119b468 401 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 264 395 1.4E-7 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CJD35_RS12840 b5dfbcad10165202557783608119b468 401 Gene3D G3DSA:3.40.50.150 49 400 4.2E-28 T 28-03-2018 CJD35_RS12840 b5dfbcad10165202557783608119b468 401 SUPERFAMILY SSF53335 47 401 1.78E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS12840 b5dfbcad10165202557783608119b468 401 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 333 363 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site CJD35_RS05865 9cfd41747ea35cf2ebd52e60f7557b73 214 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 200 22.032 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CJD35_RS05865 9cfd41747ea35cf2ebd52e60f7557b73 214 SUPERFAMILY SSF53335 8 181 2.45E-25 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS05865 9cfd41747ea35cf2ebd52e60f7557b73 214 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 24 182 5.6E-31 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CJD35_RS05865 9cfd41747ea35cf2ebd52e60f7557b73 214 Pfam PF02527 rRNA small subunit methyltransferase G 23 190 7.8E-33 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CJD35_RS05865 9cfd41747ea35cf2ebd52e60f7557b73 214 PIRSF PIRSF003078 4 209 6.3E-37 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CJD35_RS05865 9cfd41747ea35cf2ebd52e60f7557b73 214 Gene3D G3DSA:3.40.50.150 3 196 9.6E-17 T 28-03-2018 CJD35_RS03965 744a6d7bf4359da957aebd7dfa2528c7 99 SUPERFAMILY SSF48295 6 90 5.07E-19 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CJD35_RS03965 744a6d7bf4359da957aebd7dfa2528c7 99 Pfam PF06627 Protein of unknown function (DUF1153) 5 90 3.6E-39 T 28-03-2018 IPR009534 Protein of unknown function DUF1153 CJD35_RS03965 744a6d7bf4359da957aebd7dfa2528c7 99 Gene3D G3DSA:1.10.10.10 10 95 2.1E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Gene3D G3DSA:3.10.20.310 51 124 6.3E-12 T 28-03-2018 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 58 900 2.0E-218 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 PIRSF PIRSF006076 3 900 1.4E-244 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Gene3D G3DSA:3.10.20.310 295 375 5.0E-10 T 28-03-2018 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Gene3D G3DSA:3.10.20.310 376 418 0.62 T 28-03-2018 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Pfam PF01103 Surface antigen 479 900 3.9E-67 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Gene3D G3DSA:3.10.20.310 205 294 2.3E-21 T 28-03-2018 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 15 900 22.833 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Gene3D G3DSA:3.10.20.310 125 204 3.1E-18 T 28-03-2018 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Pfam PF07244 Surface antigen variable number repeat 58 123 2.0E-6 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Pfam PF07244 Surface antigen variable number repeat 296 372 1.5E-6 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Pfam PF07244 Surface antigen variable number repeat 125 202 7.4E-17 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Pfam PF07244 Surface antigen variable number repeat 206 293 2.8E-14 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Pfam PF07244 Surface antigen variable number repeat 378 451 7.4E-10 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CJD35_RS01490 68e5578f0be18ed7f445c77f6b7b70cc 900 Gene3D G3DSA:2.40.160.50 419 900 3.9E-81 T 28-03-2018 CJD35_RS06890 f49aa29d87ae0848dfec5c742179dbeb 391 Pfam PF02803 Thiolase, C-terminal domain 268 389 1.3E-44 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CJD35_RS06890 f49aa29d87ae0848dfec5c742179dbeb 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CJD35_RS06890 f49aa29d87ae0848dfec5c742179dbeb 391 SUPERFAMILY SSF53901 3 268 4.26E-67 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06890 f49aa29d87ae0848dfec5c742179dbeb 391 Gene3D G3DSA:3.40.47.10 1 263 3.9E-49 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06890 f49aa29d87ae0848dfec5c742179dbeb 391 Gene3D G3DSA:3.40.47.10 264 390 2.6E-26 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06890 f49aa29d87ae0848dfec5c742179dbeb 391 SUPERFAMILY SSF53901 269 390 2.26E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06890 f49aa29d87ae0848dfec5c742179dbeb 391 Pfam PF00108 Thiolase, N-terminal domain 5 260 3.1E-63 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CJD35_RS06890 f49aa29d87ae0848dfec5c742179dbeb 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 5.5E-124 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS06890 f49aa29d87ae0848dfec5c742179dbeb 391 PIRSF PIRSF000429 1 391 3.4E-118 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS00175 2a6163b3ccdbab8b10a6fee22b7c8003 464 Gene3D G3DSA:3.40.220.10 10 143 1.4E-11 T 28-03-2018 CJD35_RS00175 2a6163b3ccdbab8b10a6fee22b7c8003 464 PRINTS PR00481 Cytosol aminopeptidase signature 306 326 2.9E-43 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJD35_RS00175 2a6163b3ccdbab8b10a6fee22b7c8003 464 PRINTS PR00481 Cytosol aminopeptidase signature 284 305 2.9E-43 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJD35_RS00175 2a6163b3ccdbab8b10a6fee22b7c8003 464 PRINTS PR00481 Cytosol aminopeptidase signature 247 268 2.9E-43 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJD35_RS00175 2a6163b3ccdbab8b10a6fee22b7c8003 464 PRINTS PR00481 Cytosol aminopeptidase signature 334 349 2.9E-43 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJD35_RS00175 2a6163b3ccdbab8b10a6fee22b7c8003 464 PRINTS PR00481 Cytosol aminopeptidase signature 225 242 2.9E-43 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJD35_RS00175 2a6163b3ccdbab8b10a6fee22b7c8003 464 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 310 317 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CJD35_RS00175 2a6163b3ccdbab8b10a6fee22b7c8003 464 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 150 452 3.0E-102 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CJD35_RS00175 2a6163b3ccdbab8b10a6fee22b7c8003 464 SUPERFAMILY SSF53187 145 461 1.13E-103 T 28-03-2018 CJD35_RS00175 2a6163b3ccdbab8b10a6fee22b7c8003 464 Gene3D G3DSA:3.40.630.10 144 461 3.3E-119 T 28-03-2018 CJD35_RS05130 01cf9f41981959bc6308bf436ac12451 456 Pfam PF15611 EH_Signature domain 54 439 5.8E-39 T 28-03-2018 IPR028943 EH signature domain CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 1.4E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 PRINTS PR00834 HtrA/DegQ protease family signature 231 248 1.4E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 PRINTS PR00834 HtrA/DegQ protease family signature 176 200 1.4E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 PRINTS PR00834 HtrA/DegQ protease family signature 317 329 1.4E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 PRINTS PR00834 HtrA/DegQ protease family signature 108 120 1.4E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 PRINTS PR00834 HtrA/DegQ protease family signature 135 155 1.4E-54 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 SUPERFAMILY SSF50156 235 360 4.6E-22 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 Gene3D G3DSA:2.30.42.10 276 381 1.2E-24 T 28-03-2018 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 Pfam PF13365 Trypsin-like peptidase domain 99 238 4.5E-36 T 28-03-2018 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 46 488 2.7E-137 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 SMART SM00228 277 359 1.5E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 SMART SM00228 401 486 8.8E-4 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 SUPERFAMILY SSF50156 402 489 5.26E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 SUPERFAMILY SSF50494 44 267 8.22E-64 T 28-03-2018 IPR009003 Peptidase S1, PA clan CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 Gene3D G3DSA:2.40.10.10 177 275 2.1E-36 T 28-03-2018 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 Gene3D G3DSA:2.30.42.10 396 499 1.6E-14 T 28-03-2018 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 Gene3D G3DSA:2.40.10.10 42 176 5.7E-40 T 28-03-2018 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 Pfam PF13180 PDZ domain 277 365 2.8E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS01785 76f86bde03922e8a4a0ea7547a6e69a1 499 Pfam PF13180 PDZ domain 403 488 2.3E-9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS12530 bb6b99c58504882b41fb98cfb61ea4ed 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 3.3E-9 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS12530 bb6b99c58504882b41fb98cfb61ea4ed 329 SMART SM00829 11 327 5.8E-32 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS12530 bb6b99c58504882b41fb98cfb61ea4ed 329 Pfam PF00107 Zinc-binding dehydrogenase 158 275 5.4E-25 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS12530 bb6b99c58504882b41fb98cfb61ea4ed 329 Gene3D G3DSA:3.90.180.10 260 329 0.038 T 28-03-2018 CJD35_RS12530 bb6b99c58504882b41fb98cfb61ea4ed 329 Gene3D G3DSA:3.90.180.10 2 147 1.4E-40 T 28-03-2018 CJD35_RS12530 bb6b99c58504882b41fb98cfb61ea4ed 329 SUPERFAMILY SSF51735 118 275 3.51E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS12530 bb6b99c58504882b41fb98cfb61ea4ed 329 SUPERFAMILY SSF50129 3 151 5.5E-36 T 28-03-2018 IPR011032 GroES-like CJD35_RS12530 bb6b99c58504882b41fb98cfb61ea4ed 329 Gene3D G3DSA:3.40.50.720 148 259 3.4E-25 T 28-03-2018 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 1.1E-11 T 28-03-2018 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 1.1E-11 T 28-03-2018 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.1E-11 T 28-03-2018 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.1E-11 T 28-03-2018 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 Gene3D G3DSA:3.50.50.60 1 120 2.0E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 Gene3D G3DSA:3.50.50.60 245 310 1.1E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 283 3.0E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 SUPERFAMILY SSF51905 7 164 3.89E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 SUPERFAMILY SSF51905 194 316 3.89E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 9.7E-22 T 28-03-2018 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 9.7E-22 T 28-03-2018 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 9.7E-22 T 28-03-2018 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 9.7E-22 T 28-03-2018 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.7E-22 T 28-03-2018 CJD35_RS15690 03425e71cffe4b5d0bc9b0335a634df3 389 Gene3D G3DSA:3.50.50.60 121 244 6.5E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS19920 b17c087b42139b1b2fc176c58ef83e95 1014 SUPERFAMILY SSF52540 449 633 4.62E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS19920 b17c087b42139b1b2fc176c58ef83e95 1014 Pfam PF13604 AAA domain 461 655 1.6E-40 T 28-03-2018 CJD35_RS19920 b17c087b42139b1b2fc176c58ef83e95 1014 SUPERFAMILY SSF52540 589 644 1.46E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS19920 b17c087b42139b1b2fc176c58ef83e95 1014 SUPERFAMILY SSF52540 797 915 1.46E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS19920 b17c087b42139b1b2fc176c58ef83e95 1014 SUPERFAMILY SSF52540 677 709 1.46E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS19920 b17c087b42139b1b2fc176c58ef83e95 1014 SUPERFAMILY SSF55464 1 295 2.2E-81 T 28-03-2018 CJD35_RS19920 b17c087b42139b1b2fc176c58ef83e95 1014 Gene3D G3DSA:3.40.50.300 695 933 4.5E-4 T 28-03-2018 CJD35_RS19920 b17c087b42139b1b2fc176c58ef83e95 1014 Gene3D G3DSA:3.40.50.300 389 647 5.0E-18 T 28-03-2018 CJD35_RS19920 b17c087b42139b1b2fc176c58ef83e95 1014 Pfam PF08751 TrwC relaxase 11 279 5.8E-78 T 28-03-2018 IPR014862 TrwC relaxase CJD35_RS19920 b17c087b42139b1b2fc176c58ef83e95 1014 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 283 1.7E-85 T 28-03-2018 IPR014059 Conjugative relaxase, N-terminal CJD35_RS03825 94231963dd858a987830689218b05968 529 Gene3D G3DSA:3.40.140.20 369 519 1.2E-52 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS03825 94231963dd858a987830689218b05968 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 7 529 1.1E-204 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS03825 94231963dd858a987830689218b05968 529 Gene3D G3DSA:3.40.140.20 226 366 7.8E-50 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS03825 94231963dd858a987830689218b05968 529 PIRSF PIRSF000414 1 529 1.0E-211 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS03825 94231963dd858a987830689218b05968 529 Gene3D G3DSA:3.40.50.1380 1 196 1.2E-74 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CJD35_RS03825 94231963dd858a987830689218b05968 529 SMART SM00851 18 132 1.2E-56 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CJD35_RS03825 94231963dd858a987830689218b05968 529 SUPERFAMILY SSF53927 215 529 6.22E-127 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CJD35_RS03825 94231963dd858a987830689218b05968 529 SUPERFAMILY SSF52335 5 195 1.02E-68 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CJD35_RS03825 94231963dd858a987830689218b05968 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 6 529 44.152 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS03825 94231963dd858a987830689218b05968 529 SMART SM00798 137 454 4.1E-202 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS03825 94231963dd858a987830689218b05968 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 453 2.4E-116 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS03825 94231963dd858a987830689218b05968 529 Pfam PF02142 MGS-like domain 18 131 5.9E-26 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CJD35_RS12110 98648b87c549a3d51a671568ba11dc62 473 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CJD35_RS12110 98648b87c549a3d51a671568ba11dc62 473 SUPERFAMILY SSF52540 73 354 3.96E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12110 98648b87c549a3d51a671568ba11dc62 473 Gene3D G3DSA:3.40.50.300 224 371 1.0E-45 T 28-03-2018 CJD35_RS12110 98648b87c549a3d51a671568ba11dc62 473 Gene3D G3DSA:3.40.50.300 1 223 6.2E-61 T 28-03-2018 CJD35_RS12110 98648b87c549a3d51a671568ba11dc62 473 Pfam PF00270 DEAD/DEAH box helicase 25 194 7.9E-53 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJD35_RS12110 98648b87c549a3d51a671568ba11dc62 473 SMART SM00487 20 220 2.8E-64 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS12110 98648b87c549a3d51a671568ba11dc62 473 SMART SM00490 256 337 1.5E-32 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS12110 98648b87c549a3d51a671568ba11dc62 473 Pfam PF00271 Helicase conserved C-terminal domain 229 337 2.6E-30 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS02630 9ff9a5a5951c7e196b25df460e0b2116 113 Pfam PF13411 MerR HTH family regulatory protein 10 76 3.2E-22 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS02630 9ff9a5a5951c7e196b25df460e0b2116 113 SUPERFAMILY SSF46955 9 106 5.04E-14 T 28-03-2018 IPR009061 Putative DNA-binding domain CJD35_RS02630 9ff9a5a5951c7e196b25df460e0b2116 113 Gene3D G3DSA:1.10.1660.10 1 113 1.6E-22 T 28-03-2018 CJD35_RS02630 9ff9a5a5951c7e196b25df460e0b2116 113 SMART SM00422 9 79 6.7E-5 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS03615 efa9698b0ff4e356b74b0c8488d2084b 461 SUPERFAMILY SSF56935 142 461 7.33E-28 T 28-03-2018 CJD35_RS03615 efa9698b0ff4e356b74b0c8488d2084b 461 SUPERFAMILY SSF56935 86 110 7.33E-28 T 28-03-2018 CJD35_RS03615 efa9698b0ff4e356b74b0c8488d2084b 461 Gene3D G3DSA:2.40.160.10 13 461 2.6E-26 T 28-03-2018 CJD35_RS03615 efa9698b0ff4e356b74b0c8488d2084b 461 Pfam PF13609 Gram-negative porin 76 441 3.3E-19 T 28-03-2018 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 6 376 4.0E-64 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 252 376 2.9E-22 T 28-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 Gene3D G3DSA:3.10.150.10 255 377 9.6E-22 T 28-03-2018 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 Pfam PF02767 DNA polymerase III beta subunit, central domain 135 249 2.1E-21 T 28-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 SUPERFAMILY SSF55979 2 119 2.56E-16 T 28-03-2018 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 4 121 2.9E-16 T 28-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 SMART SM00480 16 373 1.4E-70 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 Gene3D G3DSA:3.10.150.10 126 254 5.4E-24 T 28-03-2018 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 Gene3D G3DSA:3.10.150.10 1 122 1.8E-19 T 28-03-2018 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 SUPERFAMILY SSF55979 252 377 7.33E-26 T 28-03-2018 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 PIRSF PIRSF000804 1 377 5.8E-87 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS11520 f8c85323b24a5098397300e576d30a89 377 SUPERFAMILY SSF55979 134 250 7.69E-16 T 28-03-2018 CJD35_RS12395 55741c12f3422dc0fa41e320718740de 296 SMART SM00342 202 285 1.0E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS12395 55741c12f3422dc0fa41e320718740de 296 Gene3D G3DSA:2.60.120.10 10 93 8.0E-5 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS12395 55741c12f3422dc0fa41e320718740de 296 Gene3D G3DSA:1.10.10.60 182 240 1.7E-14 T 28-03-2018 CJD35_RS12395 55741c12f3422dc0fa41e320718740de 296 Gene3D G3DSA:1.10.10.60 241 295 3.0E-9 T 28-03-2018 CJD35_RS12395 55741c12f3422dc0fa41e320718740de 296 SUPERFAMILY SSF46689 238 286 8.06E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS12395 55741c12f3422dc0fa41e320718740de 296 Pfam PF06719 AraC-type transcriptional regulator N-terminus 25 173 4.4E-40 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CJD35_RS12395 55741c12f3422dc0fa41e320718740de 296 SUPERFAMILY SSF46689 185 236 2.21E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS12395 55741c12f3422dc0fa41e320718740de 296 Pfam PF12833 Helix-turn-helix domain 208 281 3.9E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 SUPERFAMILY SSF52172 9 161 1.11E-34 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 267 377 8.7E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 Gene3D G3DSA:1.10.287.130 160 214 2.4E-11 T 28-03-2018 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 SMART SM00388 155 220 8.2E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 SMART SM00448 8 122 1.9E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 376 6.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 356 6.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 317 6.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 331 6.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 SUPERFAMILY SSF55874 209 377 1.31E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 Gene3D G3DSA:3.30.450.20 134 159 7.9E-4 T 28-03-2018 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 Gene3D G3DSA:3.40.50.2300 1 133 1.1E-33 T 28-03-2018 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 SUPERFAMILY SSF47384 149 216 1.29E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 SMART SM00387 266 377 1.2E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 Gene3D G3DSA:3.30.565.10 215 377 3.9E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 Pfam PF00072 Response regulator receiver domain 11 121 2.0E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS20745 6724d0f95a78fe5766766be3a15babcb 377 Pfam PF00512 His Kinase A (phospho-acceptor) domain 156 220 1.5E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 SUPERFAMILY SSF52172 9 161 1.11E-34 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 267 377 8.7E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 Gene3D G3DSA:1.10.287.130 160 214 2.4E-11 T 28-03-2018 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 SMART SM00388 155 220 8.2E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 SMART SM00448 8 122 1.9E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 376 6.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 356 6.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 303 317 6.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 PRINTS PR00344 Bacterial sensor protein C-terminal signature 321 331 6.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 SUPERFAMILY SSF55874 209 377 1.31E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 Gene3D G3DSA:3.30.450.20 134 159 7.9E-4 T 28-03-2018 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 Gene3D G3DSA:3.40.50.2300 1 133 1.1E-33 T 28-03-2018 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 SUPERFAMILY SSF47384 149 216 1.29E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 SMART SM00387 266 377 1.2E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 Gene3D G3DSA:3.30.565.10 215 377 3.9E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 Pfam PF00072 Response regulator receiver domain 11 121 2.0E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18515 6724d0f95a78fe5766766be3a15babcb 377 Pfam PF00512 His Kinase A (phospho-acceptor) domain 156 220 1.5E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 61 72 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 SUPERFAMILY SSF52374 7 208 1.62E-126 T 28-03-2018 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 SUPERFAMILY SSF52374 494 707 1.62E-126 T 28-03-2018 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 SUPERFAMILY SSF52374 435 463 1.62E-126 T 28-03-2018 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 54 65 9.2E-22 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 237 260 9.2E-22 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 621 630 9.2E-22 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 587 600 9.2E-22 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 5 970 19.317 T 28-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 Gene3D G3DSA:3.40.50.620 32 202 3.3E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 Gene3D G3DSA:3.90.740.10 203 419 7.9E-50 T 28-03-2018 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 32 700 3.0E-167 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 Pfam PF08264 Anticodon-binding domain of tRNA 757 905 1.3E-21 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 Gene3D G3DSA:1.10.730.10 701 880 4.9E-36 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 18 907 1.3E-238 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 Gene3D G3DSA:3.40.50.620 420 700 1.7E-66 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 Gene3D G3DSA:3.30.2320.20 881 934 3.1E-10 T 28-03-2018 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 SUPERFAMILY SSF50677 210 435 9.42E-35 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CJD35_RS00925 0ba1a5239eee80812a6060244754906a 971 SUPERFAMILY SSF47323 712 970 2.99E-55 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS09880 cb820b55d2e2536c48b724f356ad4ea9 453 Gene3D G3DSA:3.40.630.10 19 326 4.4E-61 T 28-03-2018 CJD35_RS09880 cb820b55d2e2536c48b724f356ad4ea9 453 PIRSF PIRSF005962 36 453 3.3E-94 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 CJD35_RS09880 cb820b55d2e2536c48b724f356ad4ea9 453 SUPERFAMILY SSF53187 349 452 1.32E-70 T 28-03-2018 CJD35_RS09880 cb820b55d2e2536c48b724f356ad4ea9 453 SUPERFAMILY SSF53187 40 243 1.32E-70 T 28-03-2018 CJD35_RS09880 cb820b55d2e2536c48b724f356ad4ea9 453 Pfam PF07687 Peptidase dimerisation domain 227 323 1.6E-13 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS09880 cb820b55d2e2536c48b724f356ad4ea9 453 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 51 397 2.8E-79 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 CJD35_RS09880 cb820b55d2e2536c48b724f356ad4ea9 453 SUPERFAMILY SSF55031 230 331 1.96E-26 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS09880 cb820b55d2e2536c48b724f356ad4ea9 453 Pfam PF01546 Peptidase family M20/M25/M40 107 404 7.7E-24 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CJD35_RS06105 e84a29bc3c249686b9c9dbb398d358cb 162 Pfam PF02600 Disulfide bond formation protein DsbB 10 153 3.0E-30 T 28-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CJD35_RS06105 e84a29bc3c249686b9c9dbb398d358cb 162 Gene3D G3DSA:1.20.1550.10 1 162 1.5E-36 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CJD35_RS06105 e84a29bc3c249686b9c9dbb398d358cb 162 SUPERFAMILY SSF158442 10 152 1.83E-30 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CJD35_RS06105 e84a29bc3c249686b9c9dbb398d358cb 162 PIRSF PIRSF033913 4 161 9.9E-31 T 28-03-2018 IPR024199 Uncharacterised conserved protein, DsbB-like CJD35_RS03575 b74c59b885c6348e95d4a77d946d8b13 614 Pfam PF00005 ABC transporter 373 522 4.8E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS03575 b74c59b885c6348e95d4a77d946d8b13 614 Gene3D G3DSA:3.40.50.300 350 598 2.5E-78 T 28-03-2018 CJD35_RS03575 b74c59b885c6348e95d4a77d946d8b13 614 Pfam PF00664 ABC transporter transmembrane region 38 311 2.6E-41 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJD35_RS03575 b74c59b885c6348e95d4a77d946d8b13 614 SUPERFAMILY SSF52540 349 592 1.96E-90 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03575 b74c59b885c6348e95d4a77d946d8b13 614 SMART SM00382 382 568 4.6E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS03575 b74c59b885c6348e95d4a77d946d8b13 614 SUPERFAMILY SSF90123 20 336 2.22E-62 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJD35_RS03575 b74c59b885c6348e95d4a77d946d8b13 614 ProSitePatterns PS00211 ABC transporters family signature. 494 508 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS03575 b74c59b885c6348e95d4a77d946d8b13 614 Gene3D G3DSA:1.20.1560.10 13 346 2.3E-59 T 28-03-2018 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 893 909 0.11 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1159 1175 0.21 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1028 1044 1.3 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1122 1139 0.025 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 856 873 0.043 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 763 778 0.47 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1105 1121 0.67 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 992 1008 0.21 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 830 846 0.2 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 874 891 0.061 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 741 751 24.0 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1009 1026 0.67 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 975 990 22.0 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1141 1157 0.41 T 28-03-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SMART SM00736 148 244 7.3E-12 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SMART SM00736 52 147 1.2E-18 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Gene3D G3DSA:2.60.40.10 146 234 2.9E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 853 871 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1155 1173 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SUPERFAMILY SSF51120 1096 1221 1.96E-21 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SUPERFAMILY SSF51120 815 956 1.06E-20 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 PRINTS PR00313 NodO calcium binding signature 848 856 6.5E-8 T 28-03-2018 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 PRINTS PR00313 NodO calcium binding signature 902 911 6.5E-8 T 28-03-2018 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 PRINTS PR00313 NodO calcium binding signature 857 865 6.5E-8 T 28-03-2018 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 PRINTS PR00313 NodO calcium binding signature 836 847 6.5E-8 T 28-03-2018 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SMART SM00710 567 589 2500.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SMART SM00710 528 565 6200.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SMART SM00710 482 504 17.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SMART SM00710 439 464 1800.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SMART SM00710 505 527 79.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 844 862 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SUPERFAMILY SSF51126 345 726 2.69E-30 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SUPERFAMILY SSF49313 58 145 1.19E-17 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF13229 Right handed beta helix region 432 587 5.7E-8 T 28-03-2018 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SUPERFAMILY SSF49313 249 333 6.71E-5 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SUPERFAMILY SSF51120 732 799 9.59E-7 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Pfam PF05345 Putative Ig domain 86 132 2.3E-5 T 28-03-2018 IPR008009 Putative Ig CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Gene3D G3DSA:2.60.40.10 45 145 1.5E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Gene3D G3DSA:2.60.350.10 235 346 1.1E-12 T 28-03-2018 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Gene3D G3DSA:2.60.120.10 960 1000 0.031 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Gene3D G3DSA:2.60.120.10 1001 1047 0.14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SUPERFAMILY SSF49313 147 242 2.62E-14 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Gene3D G3DSA:2.160.20.10 347 769 9.9E-31 T 28-03-2018 IPR012334 Pectin lyase fold CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Gene3D G3DSA:2.150.10.10 793 959 2.7E-18 T 28-03-2018 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 Gene3D G3DSA:2.150.10.10 1070 1249 1.7E-23 T 28-03-2018 CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1006 1024 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CJD35_RS04500 34d25ba1d2d905cabaeb5f088eae3f6f 1250 SUPERFAMILY SSF51120 902 1094 1.83E-17 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CJD35_RS20640 a857b88f1e280bfd380ccc045fabb9b3 526 Gene3D G3DSA:2.30.38.10 334 416 3.1E-24 T 28-03-2018 CJD35_RS20640 a857b88f1e280bfd380ccc045fabb9b3 526 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 508 1.6E-14 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CJD35_RS20640 a857b88f1e280bfd380ccc045fabb9b3 526 Gene3D G3DSA:3.40.50.980 1 179 1.8E-40 T 28-03-2018 CJD35_RS20640 a857b88f1e280bfd380ccc045fabb9b3 526 SUPERFAMILY SSF56801 2 518 9.42E-152 T 28-03-2018 CJD35_RS20640 a857b88f1e280bfd380ccc045fabb9b3 526 ProSitePatterns PS00455 Putative AMP-binding domain signature. 174 185 - T 28-03-2018 IPR020845 AMP-binding, conserved site CJD35_RS20640 a857b88f1e280bfd380ccc045fabb9b3 526 Pfam PF00501 AMP-binding enzyme 10 424 3.1E-106 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJD35_RS20640 a857b88f1e280bfd380ccc045fabb9b3 526 Gene3D G3DSA:3.40.50.980 180 333 2.0E-53 T 28-03-2018 CJD35_RS20640 a857b88f1e280bfd380ccc045fabb9b3 526 Gene3D G3DSA:3.30.300.30 417 519 8.6E-24 T 28-03-2018 CJD35_RS15490 d321270c3f832c463db9b819cbf3cb70 218 SUPERFAMILY SSF51735 6 205 5.88E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15490 d321270c3f832c463db9b819cbf3cb70 218 TIGRFAM TIGR01915 npdG: NADPH-dependent F420 reductase 6 209 8.6E-50 T 28-03-2018 IPR010185 NADPH-dependent F420 reductase GO:0006740|GO:0016651|GO:0050661|GO:0055114|GO:0070967 CJD35_RS15490 d321270c3f832c463db9b819cbf3cb70 218 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 97 2.6E-18 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CJD35_RS15490 d321270c3f832c463db9b819cbf3cb70 218 Gene3D G3DSA:3.40.50.720 4 201 2.2E-26 T 28-03-2018 CJD35_RS15685 5e37526535e2713b132f42a322bc6694 191 Gene3D G3DSA:3.10.450.50 23 191 4.1E-26 T 28-03-2018 CJD35_RS15685 5e37526535e2713b132f42a322bc6694 191 Pfam PF00866 Ring hydroxylating beta subunit 41 182 4.3E-36 T 28-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CJD35_RS15685 5e37526535e2713b132f42a322bc6694 191 SUPERFAMILY SSF54427 21 191 9.08E-38 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS05035 c53ffd1bbbf622f6ac57c7a099941091 509 SUPERFAMILY SSF56801 8 496 9.68E-116 T 28-03-2018 CJD35_RS05035 c53ffd1bbbf622f6ac57c7a099941091 509 Gene3D G3DSA:2.30.38.10 325 398 1.9E-21 T 28-03-2018 CJD35_RS05035 c53ffd1bbbf622f6ac57c7a099941091 509 Gene3D G3DSA:3.40.50.980 4 153 1.7E-27 T 28-03-2018 CJD35_RS05035 c53ffd1bbbf622f6ac57c7a099941091 509 Pfam PF00501 AMP-binding enzyme 13 406 4.8E-68 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJD35_RS05035 c53ffd1bbbf622f6ac57c7a099941091 509 Pfam PF13193 AMP-binding enzyme C-terminal domain 415 489 1.7E-21 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CJD35_RS05035 c53ffd1bbbf622f6ac57c7a099941091 509 Gene3D G3DSA:3.40.50.980 154 322 7.3E-21 T 28-03-2018 CJD35_RS05035 c53ffd1bbbf622f6ac57c7a099941091 509 Gene3D G3DSA:3.30.300.30 402 499 1.5E-26 T 28-03-2018 CJD35_RS11900 717a4847b0687915d5788eb12c317c9d 427 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 379 389 - T 28-03-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site CJD35_RS11900 717a4847b0687915d5788eb12c317c9d 427 Gene3D G3DSA:3.40.50.200 194 398 3.5E-34 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJD35_RS11900 717a4847b0687915d5788eb12c317c9d 427 Pfam PF00082 Subtilase family 227 390 5.2E-16 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJD35_RS11900 717a4847b0687915d5788eb12c317c9d 427 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 230 240 - T 28-03-2018 IPR022398 Peptidase S8, subtilisin, His-active site CJD35_RS11900 717a4847b0687915d5788eb12c317c9d 427 SUPERFAMILY SSF52743 198 391 3.01E-36 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 SUPERFAMILY SSF47384 175 249 6.67E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 Pfam PF13188 PAS domain 73 114 9.7E-6 T 28-03-2018 IPR000014 PAS domain CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 SMART SM00387 294 407 4.7E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 Gene3D G3DSA:3.30.450.20 70 187 3.3E-6 T 28-03-2018 CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 SMART SM00388 180 248 4.1E-23 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 Gene3D G3DSA:3.30.565.10 253 413 8.9E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 360 4.5E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 346 4.5E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 385 4.5E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 404 4.5E-16 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 Pfam PF00512 His Kinase A (phospho-acceptor) domain 181 247 5.4E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 294 405 4.7E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 Gene3D G3DSA:1.10.287.130 188 244 4.3E-19 T 28-03-2018 CJD35_RS09855 a4e60793d3bceb84e5a7b20a603834db 414 SUPERFAMILY SSF55874 237 405 7.2E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS04200 4e928c962ada93402efc2f830e73e4a7 1119 Pfam PF01841 Transglutaminase-like superfamily 131 245 1.8E-17 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS04200 4e928c962ada93402efc2f830e73e4a7 1119 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 81 8.1E-29 T 28-03-2018 IPR013589 Bacterial transglutaminase-like, N-terminal CJD35_RS04200 4e928c962ada93402efc2f830e73e4a7 1119 SUPERFAMILY SSF54001 7 336 7.43E-70 T 28-03-2018 CJD35_RS04200 4e928c962ada93402efc2f830e73e4a7 1119 Pfam PF09899 Putative amidoligase enzyme (DUF2126) 276 1113 0.0 T 28-03-2018 IPR018667 Domain of unknown function DUF2126 CJD35_RS04200 4e928c962ada93402efc2f830e73e4a7 1119 SMART SM00460 171 247 2.5E-18 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS04200 4e928c962ada93402efc2f830e73e4a7 1119 Gene3D G3DSA:3.90.260.10 159 277 1.5E-7 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS18200 c44c945b89bfe174bbe9656b261352f3 379 Gene3D G3DSA:3.90.180.10 278 379 8.5E-7 T 28-03-2018 CJD35_RS18200 c44c945b89bfe174bbe9656b261352f3 379 SUPERFAMILY SSF51735 152 340 6.09E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS18200 c44c945b89bfe174bbe9656b261352f3 379 Gene3D G3DSA:3.90.180.10 1 171 4.3E-41 T 28-03-2018 CJD35_RS18200 c44c945b89bfe174bbe9656b261352f3 379 Pfam PF00107 Zinc-binding dehydrogenase 186 318 1.1E-10 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS18200 c44c945b89bfe174bbe9656b261352f3 379 Pfam PF13823 Alcohol dehydrogenase GroES-associated 2 23 2.9E-8 T 28-03-2018 IPR027399 Alcohol dehydrogenase GroES-associated CJD35_RS18200 c44c945b89bfe174bbe9656b261352f3 379 Gene3D G3DSA:3.40.50.10730 172 277 6.2E-19 T 28-03-2018 CJD35_RS18200 c44c945b89bfe174bbe9656b261352f3 379 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 135 4.7E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS18200 c44c945b89bfe174bbe9656b261352f3 379 SUPERFAMILY SSF50129 2 169 2.76E-61 T 28-03-2018 IPR011032 GroES-like CJD35_RS21320 c44c945b89bfe174bbe9656b261352f3 379 Gene3D G3DSA:3.90.180.10 278 379 8.5E-7 T 28-03-2018 CJD35_RS21320 c44c945b89bfe174bbe9656b261352f3 379 SUPERFAMILY SSF51735 152 340 6.09E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS21320 c44c945b89bfe174bbe9656b261352f3 379 Gene3D G3DSA:3.90.180.10 1 171 4.3E-41 T 28-03-2018 CJD35_RS21320 c44c945b89bfe174bbe9656b261352f3 379 Pfam PF00107 Zinc-binding dehydrogenase 186 318 1.1E-10 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS21320 c44c945b89bfe174bbe9656b261352f3 379 Pfam PF13823 Alcohol dehydrogenase GroES-associated 2 23 2.9E-8 T 28-03-2018 IPR027399 Alcohol dehydrogenase GroES-associated CJD35_RS21320 c44c945b89bfe174bbe9656b261352f3 379 Gene3D G3DSA:3.40.50.10730 172 277 6.2E-19 T 28-03-2018 CJD35_RS21320 c44c945b89bfe174bbe9656b261352f3 379 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 135 4.7E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS21320 c44c945b89bfe174bbe9656b261352f3 379 SUPERFAMILY SSF50129 2 169 2.76E-61 T 28-03-2018 IPR011032 GroES-like CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 8 19 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 4 226 39.93 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 Gene3D G3DSA:3.40.50.10490 7 251 2.4E-89 T 28-03-2018 CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 PRINTS PR00395 Ribosomal protein S2 signature 176 187 6.0E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 PRINTS PR00395 Ribosomal protein S2 signature 197 211 6.0E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 PRINTS PR00395 Ribosomal protein S2 signature 39 48 6.0E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 PRINTS PR00395 Ribosomal protein S2 signature 159 176 6.0E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 PRINTS PR00395 Ribosomal protein S2 signature 8 26 6.0E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 PRINTS PR00395 Ribosomal protein S2 signature 89 106 6.0E-37 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 SUPERFAMILY SSF52313 8 231 4.32E-87 T 28-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 Pfam PF00318 Ribosomal protein S2 11 225 1.2E-88 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01530 d913ebed61d7ed44054e9970351f25e5 252 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 5 226 3.6E-96 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS04035 7bf35bbc9769cc62edf1910a67f12ef3 427 Gene3D G3DSA:3.40.640.10 82 307 1.1E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS04035 7bf35bbc9769cc62edf1910a67f12ef3 427 Gene3D G3DSA:3.90.1150.10 308 427 3.3E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS04035 7bf35bbc9769cc62edf1910a67f12ef3 427 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 5 420 4.0E-151 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CJD35_RS04035 7bf35bbc9769cc62edf1910a67f12ef3 427 Gene3D G3DSA:3.90.1150.10 1 81 1.1E-11 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS04035 7bf35bbc9769cc62edf1910a67f12ef3 427 SUPERFAMILY SSF53383 5 422 1.28E-115 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS04035 7bf35bbc9769cc62edf1910a67f12ef3 427 Pfam PF00202 Aminotransferase class-III 20 420 4.4E-101 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS05320 4496ac698c63e518ceef4464318f3556 71 Pfam PF10038 Protein of unknown function (DUF2274) 1 68 6.9E-26 T 28-03-2018 IPR018733 Protein of unknown function DUF2274 CJD35_RS14970 d3c2821a0673da0c1bab128b8bb47b8c 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS14970 d3c2821a0673da0c1bab128b8bb47b8c 475 Gene3D G3DSA:3.40.309.10 265 456 3.7E-68 T 28-03-2018 CJD35_RS14970 d3c2821a0673da0c1bab128b8bb47b8c 475 Gene3D G3DSA:3.40.605.10 12 264 9.8E-93 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS14970 d3c2821a0673da0c1bab128b8bb47b8c 475 Pfam PF00171 Aldehyde dehydrogenase family 19 468 2.1E-161 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS14970 d3c2821a0673da0c1bab128b8bb47b8c 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 246 253 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS14970 d3c2821a0673da0c1bab128b8bb47b8c 475 SUPERFAMILY SSF53720 16 473 5.11E-157 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS07945 19ff4e98e2f84bb854aaa1783fe0cd88 564 SUPERFAMILY SSF51445 15 393 2.74E-76 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CJD35_RS07945 19ff4e98e2f84bb854aaa1783fe0cd88 564 Gene3D G3DSA:3.20.20.300 15 376 6.0E-65 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CJD35_RS07945 19ff4e98e2f84bb854aaa1783fe0cd88 564 Gene3D G3DSA:3.40.50.1700 377 555 4.1E-8 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CJD35_RS07945 19ff4e98e2f84bb854aaa1783fe0cd88 564 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CJD35_RS07945 19ff4e98e2f84bb854aaa1783fe0cd88 564 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 33 352 1.5E-55 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CJD35_RS00820 e156418d73792440e95281e74689df83 309 Gene3D G3DSA:3.20.20.70 3 308 5.3E-38 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS00820 e156418d73792440e95281e74689df83 309 SUPERFAMILY SSF51412 10 257 2.75E-56 T 28-03-2018 CJD35_RS00820 e156418d73792440e95281e74689df83 309 Pfam PF03060 Nitronate monooxygenase 83 293 4.7E-21 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CJD35_RS01965 74bb0a622e0dc0ec3b668350db29cb82 393 Pfam PF00534 Glycosyl transferases group 1 201 353 5.4E-28 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS01965 74bb0a622e0dc0ec3b668350db29cb82 393 SUPERFAMILY SSF53756 6 370 5.76E-57 T 28-03-2018 CJD35_RS01965 74bb0a622e0dc0ec3b668350db29cb82 393 Gene3D G3DSA:3.40.50.2000 2 195 2.3E-8 T 28-03-2018 CJD35_RS01965 74bb0a622e0dc0ec3b668350db29cb82 393 Gene3D G3DSA:3.40.50.2000 196 365 2.7E-33 T 28-03-2018 CJD35_RS01965 74bb0a622e0dc0ec3b668350db29cb82 393 Pfam PF13579 Glycosyl transferase 4-like domain 16 172 6.4E-10 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS00035 d8b40c5df282a1c96c1057435ad25633 471 Pfam PF02614 Glucuronate isomerase 20 466 1.3E-65 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CJD35_RS00035 d8b40c5df282a1c96c1057435ad25633 471 Hamap MF_00675 Uronate isomerase [uxaC]. 4 471 38.494 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CJD35_RS00035 d8b40c5df282a1c96c1057435ad25633 471 Gene3D G3DSA:3.20.20.140 5 76 3.8E-25 T 28-03-2018 CJD35_RS00035 d8b40c5df282a1c96c1057435ad25633 471 Gene3D G3DSA:3.20.20.140 133 471 2.4E-100 T 28-03-2018 CJD35_RS00035 d8b40c5df282a1c96c1057435ad25633 471 Gene3D G3DSA:1.10.2020.10 77 132 2.7E-30 T 28-03-2018 CJD35_RS00035 d8b40c5df282a1c96c1057435ad25633 471 SUPERFAMILY SSF51556 6 470 1.87E-156 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS08575 76295499bd12dcb4608a5cf420c014ad 128 Pfam PF00237 Ribosomal protein L22p/L17e 18 119 6.0E-30 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CJD35_RS08575 76295499bd12dcb4608a5cf420c014ad 128 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 20 119 1.7E-29 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08575 76295499bd12dcb4608a5cf420c014ad 128 Gene3D G3DSA:3.90.470.10 1 128 7.1E-38 T 28-03-2018 CJD35_RS08575 76295499bd12dcb4608a5cf420c014ad 128 SUPERFAMILY SSF54843 11 122 1.18E-36 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CJD35_RS08575 76295499bd12dcb4608a5cf420c014ad 128 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 13 122 23.065 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 SMART SM00929 84 124 1.8E-19 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 Gene3D G3DSA:3.10.20.30 1 151 1.7E-13 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 SUPERFAMILY SSF54292 1 75 5.14E-18 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 99 111 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 SUPERFAMILY SSF53706 214 607 3.87E-91 T 28-03-2018 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 Pfam PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal 627 653 2.4E-9 T 28-03-2018 IPR015405 NADH-quinone oxidoreductase, chain G, C-terminal GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 Gene3D G3DSA:3.40.50.740 414 591 1.0E-29 T 28-03-2018 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 Gene3D G3DSA:3.40.50.740 260 408 3.9E-17 T 28-03-2018 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 4 77 4.3E-15 T 28-03-2018 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 580 4.5E-206 T 28-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 Pfam PF00384 Molybdopterin oxidoreductase 272 419 2.4E-31 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 Pfam PF00384 Molybdopterin oxidoreductase 424 582 1.1E-25 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 122 1.0E-15 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 SUPERFAMILY SSF54862 76 212 2.76E-38 T 28-03-2018 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 Gene3D G3DSA:3.30.70.20 152 215 0.0013 T 28-03-2018 CJD35_RS14415 63ddef7a1229c36a84cb6db354e84ca6 668 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 146 156 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS08500 290ae582e32b8c350f79e303f11a4f4c 502 Gene3D G3DSA:3.30.230.10 2 187 3.2E-31 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJD35_RS08500 290ae582e32b8c350f79e303f11a4f4c 502 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 496 1.6E-156 T 28-03-2018 IPR004482 Mg chelatase-related protein CJD35_RS08500 290ae582e32b8c350f79e303f11a4f4c 502 SUPERFAMILY SSF52540 185 498 2.13E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08500 290ae582e32b8c350f79e303f11a4f4c 502 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 401 496 1.1E-29 T 28-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CJD35_RS08500 290ae582e32b8c350f79e303f11a4f4c 502 Gene3D G3DSA:3.40.50.300 188 387 2.3E-22 T 28-03-2018 CJD35_RS08500 290ae582e32b8c350f79e303f11a4f4c 502 SMART SM00382 208 390 8.2E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS08500 290ae582e32b8c350f79e303f11a4f4c 502 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 138 9.3E-37 T 28-03-2018 CJD35_RS08500 290ae582e32b8c350f79e303f11a4f4c 502 Pfam PF01078 Magnesium chelatase, subunit ChlI 188 393 3.0E-93 T 28-03-2018 IPR000523 Magnesium chelatase ChlI domain CJD35_RS08500 290ae582e32b8c350f79e303f11a4f4c 502 SUPERFAMILY SSF54211 2 166 3.45E-27 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS02020 7097503eee1d99a640864c688eb56854 99 SUPERFAMILY SSF158757 7 73 3.27E-28 T 28-03-2018 IPR023163 SMc04008-like domain CJD35_RS02020 7097503eee1d99a640864c688eb56854 99 Gene3D G3DSA:1.10.3340.10 2 80 3.7E-33 T 28-03-2018 IPR023163 SMc04008-like domain CJD35_RS02020 7097503eee1d99a640864c688eb56854 99 Pfam PF06844 Protein of unknown function (DUF1244) 28 89 8.2E-28 T 28-03-2018 IPR023163 SMc04008-like domain CJD35_RS10600 fe5a1b910c1406ca24c15232f2fb3a02 777 Pfam PF11856 Protein of unknown function (DUF3376) 647 739 9.1E-20 T 28-03-2018 IPR024282 Domain of unknown function DUF3376 CJD35_RS10600 fe5a1b910c1406ca24c15232f2fb3a02 777 Pfam PF01734 Patatin-like phospholipase 10 330 9.4E-22 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CJD35_RS10600 fe5a1b910c1406ca24c15232f2fb3a02 777 SUPERFAMILY SSF52151 167 283 6.28E-26 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CJD35_RS10600 fe5a1b910c1406ca24c15232f2fb3a02 777 SUPERFAMILY SSF52151 6 118 6.28E-26 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CJD35_RS10600 fe5a1b910c1406ca24c15232f2fb3a02 777 SUPERFAMILY SSF52151 315 459 6.28E-26 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CJD35_RS10600 fe5a1b910c1406ca24c15232f2fb3a02 777 Gene3D G3DSA:3.40.1090.10 1 421 1.0E-31 T 28-03-2018 CJD35_RS10600 fe5a1b910c1406ca24c15232f2fb3a02 777 TIGRFAM TIGR03607 TIGR03607: patatin-related protein 5 732 1.3E-203 T 28-03-2018 IPR019894 Patatin-related protein CJD35_RS15335 f6b97b1ed469c05328a5688fe6941957 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 239 281 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CJD35_RS15335 f6b97b1ed469c05328a5688fe6941957 292 SUPERFAMILY SSF46689 239 286 4.48E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS15335 f6b97b1ed469c05328a5688fe6941957 292 Gene3D G3DSA:1.10.10.60 181 238 1.3E-11 T 28-03-2018 CJD35_RS15335 f6b97b1ed469c05328a5688fe6941957 292 Pfam PF12833 Helix-turn-helix domain 208 286 7.3E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS15335 f6b97b1ed469c05328a5688fe6941957 292 SMART SM00342 202 285 9.2E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS15335 f6b97b1ed469c05328a5688fe6941957 292 Gene3D G3DSA:2.60.120.280 53 175 4.4E-6 T 28-03-2018 CJD35_RS15335 f6b97b1ed469c05328a5688fe6941957 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 7.4E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS15335 f6b97b1ed469c05328a5688fe6941957 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 7.4E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS15335 f6b97b1ed469c05328a5688fe6941957 292 SUPERFAMILY SSF46689 186 235 2.87E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS15335 f6b97b1ed469c05328a5688fe6941957 292 Gene3D G3DSA:1.10.10.60 239 291 4.4E-13 T 28-03-2018 CJD35_RS04450 6a9f8824cc1028dbdc39df662d9e8a34 433 Gene3D G3DSA:2.40.170.20 321 426 5.8E-4 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS04450 6a9f8824cc1028dbdc39df662d9e8a34 433 Gene3D G3DSA:2.40.170.20 63 320 5.5E-4 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS04450 6a9f8824cc1028dbdc39df662d9e8a34 433 Pfam PF10082 Putative beta-barrel porin 2 48 430 2.1E-57 T 28-03-2018 IPR018759 Putative beta-barrel porin 2 CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 Pfam PF00672 HAMP domain 290 337 3.3E-13 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 Pfam PF00990 Diguanylate cyclase, GGDEF domain 347 497 1.4E-36 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 Gene3D G3DSA:3.20.20.450 510 653 5.7E-52 T 28-03-2018 IPR001633 EAL domain CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 Pfam PF14827 Double sensory domain of two-component sensor kinase 73 186 2.1E-6 T 28-03-2018 IPR029150 Double Cache domain 3 CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 344 500 6.8E-28 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 SUPERFAMILY SSF55073 352 504 1.1E-37 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 SMART SM00052 513 707 3.9E-19 T 28-03-2018 IPR001633 EAL domain CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 Gene3D G3DSA:3.30.70.270 341 509 2.2E-54 T 28-03-2018 CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 SMART SM00267 336 503 1.3E-49 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 SUPERFAMILY SSF141868 518 646 2.88E-43 T 28-03-2018 IPR001633 EAL domain CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 SMART SM00304 290 341 1.6E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 Pfam PF00563 EAL domain 520 648 1.9E-33 T 28-03-2018 IPR001633 EAL domain CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 Gene3D G3DSA:3.30.450.20 67 283 7.1E-4 T 28-03-2018 CJD35_RS10220 cb8833fe58880dec57d66bfe5a831c66 767 SUPERFAMILY SSF158472 290 336 7.85E-8 T 28-03-2018 CJD35_RS08290 b72925774e82a07a836e1e17065db1d3 191 Gene3D G3DSA:2.60.370.10 63 188 2.4E-49 T 28-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08290 b72925774e82a07a836e1e17065db1d3 191 Hamap MF_00155 Cytochrome c oxidase assembly protein CtaG [ctaG]. 1 190 37.927 T 28-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08290 b72925774e82a07a836e1e17065db1d3 191 PIRSF PIRSF005413 7 191 5.9E-68 T 28-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08290 b72925774e82a07a836e1e17065db1d3 191 SUPERFAMILY SSF110111 66 186 3.4E-48 T 28-03-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08290 b72925774e82a07a836e1e17065db1d3 191 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 36 182 1.1E-55 T 28-03-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS05825 216fbfc729f65a8b729e6242803e8bc5 329 Gene3D G3DSA:2.40.70.10 177 303 3.4E-10 T 28-03-2018 IPR021109 Aspartic peptidase domain CJD35_RS05825 216fbfc729f65a8b729e6242803e8bc5 329 Pfam PF13975 gag-polyprotein putative aspartyl protease 51 141 1.0E-14 T 28-03-2018 CJD35_RS05825 216fbfc729f65a8b729e6242803e8bc5 329 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 63 74 - T 28-03-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 CJD35_RS05825 216fbfc729f65a8b729e6242803e8bc5 329 Gene3D G3DSA:2.40.70.10 44 167 6.2E-16 T 28-03-2018 IPR021109 Aspartic peptidase domain CJD35_RS05825 216fbfc729f65a8b729e6242803e8bc5 329 SUPERFAMILY SSF50630 45 149 3.87E-10 T 28-03-2018 IPR021109 Aspartic peptidase domain CJD35_RS05825 216fbfc729f65a8b729e6242803e8bc5 329 SUPERFAMILY SSF50630 179 291 5.25E-5 T 28-03-2018 IPR021109 Aspartic peptidase domain CJD35_RS05825 216fbfc729f65a8b729e6242803e8bc5 329 Pfam PF13650 Aspartyl protease 190 285 4.8E-10 T 28-03-2018 CJD35_RS19630 4e91e4c4491d15b1b29afecf25207761 346 SMART SM00729 31 235 1.2E-8 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS19630 4e91e4c4491d15b1b29afecf25207761 346 Pfam PF13353 4Fe-4S single cluster domain 38 121 7.3E-8 T 28-03-2018 CJD35_RS19630 4e91e4c4491d15b1b29afecf25207761 346 Gene3D G3DSA:3.20.20.70 19 346 7.3E-76 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS19630 4e91e4c4491d15b1b29afecf25207761 346 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 37 48 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 CJD35_RS19630 4e91e4c4491d15b1b29afecf25207761 346 SUPERFAMILY SSF102114 22 294 9.29E-73 T 28-03-2018 CJD35_RS19630 4e91e4c4491d15b1b29afecf25207761 346 Pfam PF06463 Molybdenum Cofactor Synthesis C 203 327 1.5E-32 T 28-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 CJD35_RS19630 4e91e4c4491d15b1b29afecf25207761 346 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 22 346 1.5E-105 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CJD35_RS19630 4e91e4c4491d15b1b29afecf25207761 346 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 22 346 36.888 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CJD35_RS19630 4e91e4c4491d15b1b29afecf25207761 346 Pfam PF04055 Radical SAM superfamily 36 193 1.7E-26 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS13435 765abf5ebd5ee6ce2f4c847c194846ee 143 Gene3D G3DSA:2.60.120.10 32 136 6.1E-20 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS13435 765abf5ebd5ee6ce2f4c847c194846ee 143 SUPERFAMILY SSF51182 31 139 4.8E-23 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS13435 765abf5ebd5ee6ce2f4c847c194846ee 143 Pfam PF07883 Cupin domain 61 126 2.1E-17 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 PIRSF PIRSF036557 1 473 4.8E-177 T 28-03-2018 IPR012175 Xanthine dehydrogenase, small subunit, bacteria CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 SUPERFAMILY SSF56176 181 351 6.84E-55 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 SUPERFAMILY SSF55447 360 462 3.66E-31 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 59 1.1E-4 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 Pfam PF01799 [2Fe-2S] binding domain 82 153 1.4E-21 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 Gene3D G3DSA:3.30.43.10 185 238 3.1E-19 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 187 351 1.5E-49 T 28-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 SUPERFAMILY SSF47741 93 165 4.06E-22 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 Gene3D G3DSA:3.30.390.50 354 465 3.9E-27 T 28-03-2018 CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 SUPERFAMILY SSF54292 1 86 1.45E-18 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 Gene3D G3DSA:3.10.20.30 1 82 2.0E-26 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 TIGRFAM TIGR02963 xanthine_xdhA: xanthine dehydrogenase, small subunit 3 458 2.0E-170 T 28-03-2018 IPR014307 Xanthine dehydrogenase, small subunit GO:0004854|GO:0004855|GO:0050660|GO:0055114 KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999|Reactome: R-HSA-74259|Reactome: R-HSA-8851680 CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 362 458 2.5E-27 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 SMART SM01092 359 460 3.6E-28 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 Gene3D G3DSA:1.10.150.120 83 184 1.2E-23 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS17435 3c4c58ef5adffa48f9cceaf375acf80d 475 Gene3D G3DSA:3.30.465.10 239 351 6.9E-28 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJD35_RS05215 d018b90bfc1025bbc7d980f8dd29c7cb 1092 Pfam PF04851 Type III restriction enzyme, res subunit 310 482 5.5E-19 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CJD35_RS05215 d018b90bfc1025bbc7d980f8dd29c7cb 1092 SUPERFAMILY SSF52540 639 724 1.52E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05215 d018b90bfc1025bbc7d980f8dd29c7cb 1092 SUPERFAMILY SSF52540 338 387 1.52E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05215 d018b90bfc1025bbc7d980f8dd29c7cb 1092 Gene3D G3DSA:3.40.50.300 217 505 4.6E-19 T 28-03-2018 CJD35_RS05215 d018b90bfc1025bbc7d980f8dd29c7cb 1092 SMART SM00487 306 519 9.9E-7 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS05215 d018b90bfc1025bbc7d980f8dd29c7cb 1092 SUPERFAMILY SSF52540 276 536 6.02E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05215 d018b90bfc1025bbc7d980f8dd29c7cb 1092 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 12 222 2.0E-33 T 28-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CJD35_RS05215 d018b90bfc1025bbc7d980f8dd29c7cb 1092 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 18 738 1.4E-129 T 28-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 CJD35_RS03430 ecc1457b5d65a3ffc901318a65571e79 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 52 71 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CJD35_RS03430 ecc1457b5d65a3ffc901318a65571e79 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 6 96 3.2E-41 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CJD35_RS03430 ecc1457b5d65a3ffc901318a65571e79 98 SMART SM00411 7 96 1.3E-32 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS03430 ecc1457b5d65a3ffc901318a65571e79 98 PRINTS PR01727 Prokaryotic integration host factor signature 64 77 5.1E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS03430 ecc1457b5d65a3ffc901318a65571e79 98 PRINTS PR01727 Prokaryotic integration host factor signature 46 61 5.1E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS03430 ecc1457b5d65a3ffc901318a65571e79 98 PRINTS PR01727 Prokaryotic integration host factor signature 80 94 5.1E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS03430 ecc1457b5d65a3ffc901318a65571e79 98 Gene3D G3DSA:4.10.520.10 1 98 4.1E-27 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS03430 ecc1457b5d65a3ffc901318a65571e79 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 5 98 26.104 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CJD35_RS03430 ecc1457b5d65a3ffc901318a65571e79 98 SUPERFAMILY SSF47729 7 96 3.24E-26 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS03430 ecc1457b5d65a3ffc901318a65571e79 98 Pfam PF00216 Bacterial DNA-binding protein 7 95 1.2E-25 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS16505 d686e0e3b40a0e776f6bbfca669fde19 514 Gene3D G3DSA:3.40.190.10 188 283 3.6E-18 T 28-03-2018 CJD35_RS16505 d686e0e3b40a0e776f6bbfca669fde19 514 Gene3D G3DSA:3.10.105.10 284 481 1.3E-32 T 28-03-2018 CJD35_RS16505 d686e0e3b40a0e776f6bbfca669fde19 514 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 427 2.4E-59 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CJD35_RS16505 d686e0e3b40a0e776f6bbfca669fde19 514 SUPERFAMILY SSF53850 36 512 7.96E-103 T 28-03-2018 CJD35_RS16505 d686e0e3b40a0e776f6bbfca669fde19 514 PIRSF PIRSF002741 14 503 3.9E-56 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CJD35_RS16505 d686e0e3b40a0e776f6bbfca669fde19 514 Gene3D G3DSA:3.90.76.10 51 187 8.0E-24 T 28-03-2018 CJD35_RS04740 63a8084a957dd05e96806a848f58ba50 164 SUPERFAMILY SSF46785 9 139 6.68E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS04740 63a8084a957dd05e96806a848f58ba50 164 SMART SM00347 27 128 1.6E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS04740 63a8084a957dd05e96806a848f58ba50 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 2.9E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS04740 63a8084a957dd05e96806a848f58ba50 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 2.9E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS04740 63a8084a957dd05e96806a848f58ba50 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 2.9E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS04740 63a8084a957dd05e96806a848f58ba50 164 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 68 2.9E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS04740 63a8084a957dd05e96806a848f58ba50 164 Pfam PF13463 Winged helix DNA-binding domain 40 101 4.3E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS04740 63a8084a957dd05e96806a848f58ba50 164 Gene3D G3DSA:1.10.10.10 1 147 3.9E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS20825 34ed8685ff8a9c326c15eaaeaaf0fec8 262 Pfam PF00106 short chain dehydrogenase 10 197 1.7E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20825 34ed8685ff8a9c326c15eaaeaaf0fec8 262 Gene3D G3DSA:3.40.50.720 2 259 7.2E-41 T 28-03-2018 CJD35_RS20825 34ed8685ff8a9c326c15eaaeaaf0fec8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20825 34ed8685ff8a9c326c15eaaeaaf0fec8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20825 34ed8685ff8a9c326c15eaaeaaf0fec8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20825 34ed8685ff8a9c326c15eaaeaaf0fec8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20825 34ed8685ff8a9c326c15eaaeaaf0fec8 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS20825 34ed8685ff8a9c326c15eaaeaaf0fec8 262 SUPERFAMILY SSF51735 5 257 3.03E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS22030 34ed8685ff8a9c326c15eaaeaaf0fec8 262 Pfam PF00106 short chain dehydrogenase 10 197 1.7E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS22030 34ed8685ff8a9c326c15eaaeaaf0fec8 262 Gene3D G3DSA:3.40.50.720 2 259 7.2E-41 T 28-03-2018 CJD35_RS22030 34ed8685ff8a9c326c15eaaeaaf0fec8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS22030 34ed8685ff8a9c326c15eaaeaaf0fec8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 3.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS22030 34ed8685ff8a9c326c15eaaeaaf0fec8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS22030 34ed8685ff8a9c326c15eaaeaaf0fec8 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS22030 34ed8685ff8a9c326c15eaaeaaf0fec8 262 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS22030 34ed8685ff8a9c326c15eaaeaaf0fec8 262 SUPERFAMILY SSF51735 5 257 3.03E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10165 72e3c3964598dc7151c2aa8dd3489342 99 Pfam PF04380 Membrane fusogenic activity 2 77 1.2E-24 T 28-03-2018 IPR007475 Membrane fusogenic activity CJD35_RS20990 89a48a2a573cca729ea2f503bb517cc4 426 Pfam PF02661 Fic/DOC family 51 146 1.0E-15 T 28-03-2018 IPR003812 Fido domain CJD35_RS20990 89a48a2a573cca729ea2f503bb517cc4 426 SUPERFAMILY SSF140931 27 189 7.06E-28 T 28-03-2018 IPR003812 Fido domain CJD35_RS20990 89a48a2a573cca729ea2f503bb517cc4 426 Gene3D G3DSA:1.10.3290.10 6 198 8.7E-20 T 28-03-2018 IPR003812 Fido domain CJD35_RS20990 89a48a2a573cca729ea2f503bb517cc4 426 Gene3D G3DSA:1.20.120.160 306 411 0.28 T 28-03-2018 CJD35_RS20845 449c96056897dcc3564cf0bb616c8475 638 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 96 539 6.3E-106 T 28-03-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 CJD35_RS20845 449c96056897dcc3564cf0bb616c8475 638 SUPERFAMILY SSF52540 110 535 2.66E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20845 449c96056897dcc3564cf0bb616c8475 638 Gene3D G3DSA:3.40.50.300 85 538 7.8E-46 T 28-03-2018 CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 155 4.3E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 4.3E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 94 105 4.3E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 Gene3D G3DSA:3.40.50.720 60 264 1.3E-61 T 28-03-2018 CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 SUPERFAMILY SSF51735 16 263 4.38E-77 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 261 8.0E-60 T 28-03-2018 CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 Gene3D G3DSA:3.40.50.10090 10 59 2.2E-9 T 28-03-2018 CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 19 36 2.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 157 2.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 2.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 2.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 2.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06835 1fa6cd622447767ae534c3bb07e28f69 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 2.1E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17095 a71a5ecac8aa977efb4cfdc9b462e3a7 892 Pfam PF00593 TonB dependent receptor 372 890 1.9E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17095 a71a5ecac8aa977efb4cfdc9b462e3a7 892 SUPERFAMILY SSF56935 284 605 2.44E-92 T 28-03-2018 CJD35_RS17095 a71a5ecac8aa977efb4cfdc9b462e3a7 892 SUPERFAMILY SSF56935 1 187 2.44E-92 T 28-03-2018 CJD35_RS17095 a71a5ecac8aa977efb4cfdc9b462e3a7 892 SUPERFAMILY SSF56935 635 681 2.44E-92 T 28-03-2018 CJD35_RS17095 a71a5ecac8aa977efb4cfdc9b462e3a7 892 SUPERFAMILY SSF56935 710 892 2.44E-92 T 28-03-2018 CJD35_RS17095 a71a5ecac8aa977efb4cfdc9b462e3a7 892 Gene3D G3DSA:2.170.130.10 12 131 1.7E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17095 a71a5ecac8aa977efb4cfdc9b462e3a7 892 Pfam PF07715 TonB-dependent Receptor Plug Domain 14 125 2.6E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17095 a71a5ecac8aa977efb4cfdc9b462e3a7 892 Gene3D G3DSA:2.40.170.20 132 892 1.1E-73 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 8.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 8.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 8.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 8.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 8.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 2.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 243 1.7E-62 T 28-03-2018 CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 SUPERFAMILY SSF51735 6 246 2.56E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 Gene3D G3DSA:3.40.50.720 48 248 1.1E-56 T 28-03-2018 CJD35_RS06240 2dbdd98be505cd837064fca39650a8f5 248 Gene3D G3DSA:3.40.50.720 1 47 6.0E-11 T 28-03-2018 CJD35_RS10130 573a16da499d2afebc1441cd751bc10c 440 SUPERFAMILY SSF47384 215 285 6.47E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS10130 573a16da499d2afebc1441cd751bc10c 440 SMART SM00388 232 290 1.3E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS10130 573a16da499d2afebc1441cd751bc10c 440 Gene3D G3DSA:3.30.565.10 273 436 2.3E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10130 573a16da499d2afebc1441cd751bc10c 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 5.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS10130 573a16da499d2afebc1441cd751bc10c 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 5.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS10130 573a16da499d2afebc1441cd751bc10c 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 434 3.0E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10130 573a16da499d2afebc1441cd751bc10c 440 SMART SM00304 180 231 3.2E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJD35_RS10130 573a16da499d2afebc1441cd751bc10c 440 SMART SM00387 329 440 2.0E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10130 573a16da499d2afebc1441cd751bc10c 440 Gene3D G3DSA:1.10.287.130 222 272 6.1E-7 T 28-03-2018 CJD35_RS10130 573a16da499d2afebc1441cd751bc10c 440 SUPERFAMILY SSF55874 295 434 7.07E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02345 a395e882e60c467948566e291830e1c5 426 Gene3D G3DSA:3.40.630.40 194 415 1.5E-51 T 28-03-2018 CJD35_RS02345 a395e882e60c467948566e291830e1c5 426 SMART SM00646 256 410 1.0E-41 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CJD35_RS02345 a395e882e60c467948566e291830e1c5 426 Pfam PF11741 AMIN domain 55 131 1.7E-8 T 28-03-2018 IPR021731 AMIN domain CJD35_RS02345 a395e882e60c467948566e291830e1c5 426 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 195 410 1.4E-48 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CJD35_RS02345 a395e882e60c467948566e291830e1c5 426 SUPERFAMILY SSF53187 337 413 6.59E-50 T 28-03-2018 CJD35_RS02345 a395e882e60c467948566e291830e1c5 426 SUPERFAMILY SSF53187 193 290 6.59E-50 T 28-03-2018 CJD35_RS07385 96e22f16d27157b7ddc55f7a27723055 434 SUPERFAMILY SSF63433 17 125 5.23E-27 T 28-03-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CJD35_RS07385 96e22f16d27157b7ddc55f7a27723055 434 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 132 429 2.2E-54 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS07385 96e22f16d27157b7ddc55f7a27723055 434 Pfam PF09298 Fumarylacetoacetase N-terminal 31 125 3.5E-18 T 28-03-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CJD35_RS07385 96e22f16d27157b7ddc55f7a27723055 434 Gene3D G3DSA:2.30.30.230 17 118 1.8E-25 T 28-03-2018 IPR015377 Fumarylacetoacetase, N-terminal GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CJD35_RS07385 96e22f16d27157b7ddc55f7a27723055 434 Gene3D G3DSA:3.90.850.10 123 417 7.5E-79 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS07385 96e22f16d27157b7ddc55f7a27723055 434 SUPERFAMILY SSF56529 127 432 3.14E-88 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS07385 96e22f16d27157b7ddc55f7a27723055 434 TIGRFAM TIGR01266 fum_ac_acetase: fumarylacetoacetase 17 432 3.2E-158 T 28-03-2018 IPR005959 Fumarylacetoacetase GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 CJD35_RS04915 2ac6717565112c372dbbf733ac3f2389 339 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 14 234 7.4E-112 T 28-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CJD35_RS04915 2ac6717565112c372dbbf733ac3f2389 339 SUPERFAMILY SSF52540 20 250 2.7E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04915 2ac6717565112c372dbbf733ac3f2389 339 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 23 326 8.5E-132 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CJD35_RS04915 2ac6717565112c372dbbf733ac3f2389 339 Gene3D G3DSA:3.40.50.300 18 181 8.9E-29 T 28-03-2018 CJD35_RS04915 2ac6717565112c372dbbf733ac3f2389 339 SMART SM00382 51 178 3.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS04915 2ac6717565112c372dbbf733ac3f2389 339 Gene3D G3DSA:1.10.8.60 184 254 4.5E-28 T 28-03-2018 CJD35_RS04915 2ac6717565112c372dbbf733ac3f2389 339 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 339 166.112 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CJD35_RS04915 2ac6717565112c372dbbf733ac3f2389 339 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 269 327 4.0E-24 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CJD35_RS04915 2ac6717565112c372dbbf733ac3f2389 339 SUPERFAMILY SSF46785 256 330 8.71E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS04915 2ac6717565112c372dbbf733ac3f2389 339 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 253 326 4.2E-29 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CJD35_RS04915 2ac6717565112c372dbbf733ac3f2389 339 Gene3D G3DSA:1.10.10.10 257 327 2.8E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 SUPERFAMILY SSF55424 342 464 6.36E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 Gene3D G3DSA:3.30.390.30 344 465 8.9E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 454 5.5E-36 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 Gene3D G3DSA:3.50.50.60 159 209 2.0E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 Gene3D G3DSA:3.50.50.60 210 343 9.3E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 465 1.5E-172 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 8.3E-67 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 8.3E-67 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 139 148 8.3E-67 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 8.3E-67 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 8.3E-67 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 429 449 8.3E-67 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 8.3E-67 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 8.3E-67 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 8.3E-67 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 326 3.6E-67 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 SUPERFAMILY SSF51905 1 372 2.78E-65 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 136 154 9.9E-42 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 9.9E-42 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.9E-42 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 9.9E-42 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 9.9E-42 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 PIRSF PIRSF000350 1 464 4.0E-86 T 28-03-2018 CJD35_RS19880 40e3caeddb93ef11e27a38342f212678 465 Gene3D G3DSA:3.50.50.60 1 158 3.6E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05720 a21a52d10bb39ac82b05cf2ad5707527 219 SUPERFAMILY SSF48403 60 192 3.11E-25 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS05720 a21a52d10bb39ac82b05cf2ad5707527 219 SMART SM00248 80 109 23.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS05720 a21a52d10bb39ac82b05cf2ad5707527 219 SMART SM00248 146 175 0.29 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS05720 a21a52d10bb39ac82b05cf2ad5707527 219 SMART SM00248 113 142 0.39 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS05720 a21a52d10bb39ac82b05cf2ad5707527 219 Gene3D G3DSA:1.25.40.20 39 137 6.5E-21 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS05720 a21a52d10bb39ac82b05cf2ad5707527 219 Gene3D G3DSA:1.25.40.20 138 207 4.2E-13 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS05720 a21a52d10bb39ac82b05cf2ad5707527 219 Pfam PF12796 Ankyrin repeats (3 copies) 60 144 5.4E-9 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS05720 a21a52d10bb39ac82b05cf2ad5707527 219 Pfam PF00023 Ankyrin repeat 147 177 0.0055 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS08225 b1485ef6220051cab3eccb9a97e9bf1f 405 Gene3D G3DSA:3.90.1260.10 164 360 3.0E-90 T 28-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS08225 b1485ef6220051cab3eccb9a97e9bf1f 405 SUPERFAMILY SSF52402 6 175 3.31E-44 T 28-03-2018 CJD35_RS08225 b1485ef6220051cab3eccb9a97e9bf1f 405 SUPERFAMILY SSF69864 180 403 2.09E-91 T 28-03-2018 CJD35_RS08225 b1485ef6220051cab3eccb9a97e9bf1f 405 TIGRFAM TIGR00032 argG: argininosuccinate synthase 7 401 1.7E-142 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS08225 b1485ef6220051cab3eccb9a97e9bf1f 405 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 11 19 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS08225 b1485ef6220051cab3eccb9a97e9bf1f 405 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS08225 b1485ef6220051cab3eccb9a97e9bf1f 405 Gene3D G3DSA:1.20.5.470 371 403 3.3E-13 T 28-03-2018 CJD35_RS08225 b1485ef6220051cab3eccb9a97e9bf1f 405 Pfam PF00764 Arginosuccinate synthase 9 399 8.7E-153 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS08225 b1485ef6220051cab3eccb9a97e9bf1f 405 Hamap MF_00005 Argininosuccinate synthase [argG]. 5 405 51.983 T 28-03-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS08225 b1485ef6220051cab3eccb9a97e9bf1f 405 Gene3D G3DSA:3.40.50.620 6 163 8.6E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS10310 2d011dbc4c457429ea3e9260f62b4c20 325 Gene3D G3DSA:3.30.200.20 1 109 1.2E-22 T 28-03-2018 CJD35_RS10310 2d011dbc4c457429ea3e9260f62b4c20 325 Hamap MF_00301 Homoserine kinase [thrB]. 1 325 136.268 T 28-03-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CJD35_RS10310 2d011dbc4c457429ea3e9260f62b4c20 325 Pfam PF01636 Phosphotransferase enzyme family 28 258 1.9E-35 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CJD35_RS10310 2d011dbc4c457429ea3e9260f62b4c20 325 SUPERFAMILY SSF56112 5 314 4.09E-76 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS10310 2d011dbc4c457429ea3e9260f62b4c20 325 Gene3D G3DSA:3.90.1200.10 111 321 2.6E-29 T 28-03-2018 CJD35_RS10310 2d011dbc4c457429ea3e9260f62b4c20 325 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 312 2.3E-114 T 28-03-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CJD35_RS16375 306dc3c9c730e4765e56949f9d24c22e 466 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 316 420 5.8E-9 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CJD35_RS16375 306dc3c9c730e4765e56949f9d24c22e 466 PIRSF PIRSF006487 28 442 9.1E-26 T 28-03-2018 CJD35_RS16375 306dc3c9c730e4765e56949f9d24c22e 466 Pfam PF01571 Aminomethyltransferase folate-binding domain 32 256 1.2E-39 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CJD35_RS16375 306dc3c9c730e4765e56949f9d24c22e 466 SUPERFAMILY SSF101790 372 419 5.01E-5 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CJD35_RS16375 306dc3c9c730e4765e56949f9d24c22e 466 Gene3D G3DSA:4.10.1250.10 283 330 9.7E-12 T 28-03-2018 CJD35_RS16375 306dc3c9c730e4765e56949f9d24c22e 466 Gene3D G3DSA:2.40.30.110 331 433 2.5E-11 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CJD35_RS16375 306dc3c9c730e4765e56949f9d24c22e 466 SUPERFAMILY SSF103025 15 256 8.63E-56 T 28-03-2018 CJD35_RS16375 306dc3c9c730e4765e56949f9d24c22e 466 SUPERFAMILY SSF103025 290 330 8.63E-56 T 28-03-2018 CJD35_RS16375 306dc3c9c730e4765e56949f9d24c22e 466 Gene3D G3DSA:3.30.1360.120 139 253 1.3E-16 T 28-03-2018 CJD35_RS16375 306dc3c9c730e4765e56949f9d24c22e 466 Gene3D G3DSA:3.30.1360.120 17 134 3.9E-10 T 28-03-2018 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 454 633 2.0E-74 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 Pfam PF00009 Elongation factor Tu GTP binding domain 31 231 1.7E-41 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 SUPERFAMILY SSF50447 246 336 3.74E-26 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 24 468 52.07 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 Gene3D G3DSA:3.40.50.300 9 243 3.5E-38 T 28-03-2018 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 Pfam PF01583 Adenylylsulphate kinase 469 620 1.8E-71 T 28-03-2018 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 PRINTS PR00315 GTP-binding elongation factor signature 115 125 8.8E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 PRINTS PR00315 GTP-binding elongation factor signature 168 177 8.8E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 PRINTS PR00315 GTP-binding elongation factor signature 131 142 8.8E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 PRINTS PR00315 GTP-binding elongation factor signature 95 103 8.8E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 PRINTS PR00315 GTP-binding elongation factor signature 34 47 8.8E-13 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 SUPERFAMILY SSF52540 460 635 5.31E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 467 637 36.247 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 Pfam PF03144 Elongation factor Tu domain 2 270 329 1.9E-8 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 Gene3D G3DSA:2.40.30.10 244 334 9.7E-25 T 28-03-2018 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 33 439 4.3E-202 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 SUPERFAMILY SSF52540 28 258 6.08E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 Gene3D G3DSA:3.40.50.300 464 636 3.2E-48 T 28-03-2018 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 88 103 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 Gene3D G3DSA:2.40.30.10 336 440 4.2E-25 T 28-03-2018 CJD35_RS08955 3acbef43d6c2c858407476634366a5e2 637 SUPERFAMILY SSF50465 338 439 3.41E-32 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CJD35_RS07965 b9191a548ce0c4047cac0215e9f1aed6 349 Gene3D G3DSA:3.40.50.2300 189 325 4.6E-38 T 28-03-2018 CJD35_RS07965 b9191a548ce0c4047cac0215e9f1aed6 349 SMART SM00354 16 86 2.9E-24 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS07965 b9191a548ce0c4047cac0215e9f1aed6 349 Gene3D G3DSA:1.10.260.40 32 69 3.2E-18 T 28-03-2018 CJD35_RS07965 b9191a548ce0c4047cac0215e9f1aed6 349 SUPERFAMILY SSF53822 77 346 7.97E-54 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CJD35_RS07965 b9191a548ce0c4047cac0215e9f1aed6 349 Gene3D G3DSA:3.40.50.2300 70 188 8.5E-23 T 28-03-2018 CJD35_RS07965 b9191a548ce0c4047cac0215e9f1aed6 349 Pfam PF00356 Bacterial regulatory proteins, lacI family 18 63 8.0E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS07965 b9191a548ce0c4047cac0215e9f1aed6 349 SUPERFAMILY SSF47413 16 74 1.72E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS07965 b9191a548ce0c4047cac0215e9f1aed6 349 Pfam PF13377 Periplasmic binding protein-like domain 183 344 1.7E-28 T 28-03-2018 CJD35_RS07965 b9191a548ce0c4047cac0215e9f1aed6 349 Gene3D G3DSA:1.10.10.60 7 31 0.0013 T 28-03-2018 CJD35_RS09475 a126916128472b50abddc3e1a5ebeaec 285 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 53 80 - T 28-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CJD35_RS09475 a126916128472b50abddc3e1a5ebeaec 285 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 21 278 49.427 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CJD35_RS09475 a126916128472b50abddc3e1a5ebeaec 285 Gene3D G3DSA:3.40.50.150 11 222 3.3E-46 T 28-03-2018 CJD35_RS09475 a126916128472b50abddc3e1a5ebeaec 285 Pfam PF00398 Ribosomal RNA adenine dimethylase 22 275 3.0E-40 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CJD35_RS09475 a126916128472b50abddc3e1a5ebeaec 285 SUPERFAMILY SSF53335 17 277 1.04E-64 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS09475 a126916128472b50abddc3e1a5ebeaec 285 SMART SM00650 37 212 8.2E-59 T 28-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CJD35_RS09475 a126916128472b50abddc3e1a5ebeaec 285 Gene3D G3DSA:1.10.8.100 223 283 3.3E-18 T 28-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CJD35_RS09475 a126916128472b50abddc3e1a5ebeaec 285 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 22 275 2.0E-64 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CJD35_RS01795 13a237abee0ef7dc0f3612896c4398ba 434 Pfam PF05977 Transmembrane secretion effector 36 401 5.4E-30 T 28-03-2018 IPR010290 Transmembrane secretion effector CJD35_RS01795 13a237abee0ef7dc0f3612896c4398ba 434 Gene3D G3DSA:1.20.1250.20 221 419 4.3E-9 T 28-03-2018 CJD35_RS01795 13a237abee0ef7dc0f3612896c4398ba 434 SUPERFAMILY SSF103473 25 413 1.57E-31 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS01795 13a237abee0ef7dc0f3612896c4398ba 434 Gene3D G3DSA:1.20.1250.20 11 211 6.7E-20 T 28-03-2018 CJD35_RS05985 d3e5dfa10ab470424de84bd2ffba2b5f 439 PIRSF PIRSF001434 24 439 5.2E-115 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CJD35_RS05985 d3e5dfa10ab470424de84bd2ffba2b5f 439 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 35 435 1.9E-100 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CJD35_RS05985 d3e5dfa10ab470424de84bd2ffba2b5f 439 Gene3D G3DSA:3.40.640.10 31 302 8.8E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS05985 d3e5dfa10ab470424de84bd2ffba2b5f 439 Gene3D G3DSA:3.90.1150.10 303 439 7.9E-45 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS05985 d3e5dfa10ab470424de84bd2ffba2b5f 439 SUPERFAMILY SSF53383 80 436 1.12E-87 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS16740 4eb982fb42271a8ef9bb92bed6fa3c2e 396 Gene3D G3DSA:3.40.50.300 100 385 3.0E-39 T 28-03-2018 CJD35_RS16740 4eb982fb42271a8ef9bb92bed6fa3c2e 396 Gene3D G3DSA:1.10.1660.10 37 96 7.9E-7 T 28-03-2018 CJD35_RS16740 4eb982fb42271a8ef9bb92bed6fa3c2e 396 Pfam PF13614 AAA domain 103 280 3.8E-29 T 28-03-2018 IPR025669 AAA domain CJD35_RS16740 4eb982fb42271a8ef9bb92bed6fa3c2e 396 SUPERFAMILY SSF52540 99 352 8.61E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS00975 56f99ae87c8eb0efe34dfa91c1265d99 181 SUPERFAMILY SSF52833 4 180 7.74E-55 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS00975 56f99ae87c8eb0efe34dfa91c1265d99 181 Gene3D G3DSA:3.40.30.10 2 181 1.5E-44 T 28-03-2018 CJD35_RS00975 56f99ae87c8eb0efe34dfa91c1265d99 181 PRINTS PR01011 Glutathione peroxidase family signature 141 150 9.1E-18 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CJD35_RS00975 56f99ae87c8eb0efe34dfa91c1265d99 181 PRINTS PR01011 Glutathione peroxidase family signature 22 39 9.1E-18 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CJD35_RS00975 56f99ae87c8eb0efe34dfa91c1265d99 181 PRINTS PR01011 Glutathione peroxidase family signature 57 73 9.1E-18 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CJD35_RS00975 56f99ae87c8eb0efe34dfa91c1265d99 181 PIRSF PIRSF000303 1 181 1.7E-58 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CJD35_RS00975 56f99ae87c8eb0efe34dfa91c1265d99 181 Pfam PF00255 Glutathione peroxidase 8 110 4.1E-37 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 4.8E-45 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 SUPERFAMILY SSF56645 4 243 3.4E-81 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 PIRSF PIRSF016578 10 98 5.3 T 28-03-2018 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 PIRSF PIRSF016578 130 381 2.7E-17 T 28-03-2018 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 121 7.4E-35 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 127 139 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 218 8.6E-28 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 SUPERFAMILY SSF47203 229 380 3.87E-48 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 Gene3D G3DSA:2.40.110.10 124 218 1.5E-38 T 28-03-2018 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 Gene3D G3DSA:1.10.540.10 1 123 2.4E-39 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS11275 d31909e98b3919fb6be8dbcd49d85c66 381 Gene3D G3DSA:1.20.140.10 219 381 5.0E-56 T 28-03-2018 CJD35_RS09955 209c5b68d67a9188ff81efb0d2224130 322 Gene3D G3DSA:3.40.50.10330 3 131 2.2E-15 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CJD35_RS09955 209c5b68d67a9188ff81efb0d2224130 322 SUPERFAMILY SSF111331 4 307 2.62E-27 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CJD35_RS09955 209c5b68d67a9188ff81efb0d2224130 322 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 117 8.2E-15 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CJD35_RS09955 209c5b68d67a9188ff81efb0d2224130 322 SMART SM00046 3 133 3.4E-4 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CJD35_RS15080 e8cd528cd8cf9982b94b33fc0d6bd5b8 619 SMART SM00642 44 515 3.3E-93 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CJD35_RS15080 e8cd528cd8cf9982b94b33fc0d6bd5b8 619 SUPERFAMILY SSF51445 15 524 1.32E-92 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CJD35_RS15080 e8cd528cd8cf9982b94b33fc0d6bd5b8 619 Pfam PF00128 Alpha amylase, catalytic domain 82 463 2.8E-66 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CJD35_RS15080 e8cd528cd8cf9982b94b33fc0d6bd5b8 619 Gene3D G3DSA:2.60.40.1180 532 606 1.1E-8 T 28-03-2018 CJD35_RS15080 e8cd528cd8cf9982b94b33fc0d6bd5b8 619 Gene3D G3DSA:3.20.20.80 22 531 1.3E-88 T 28-03-2018 CJD35_RS14905 7b37561116e5498b00eb731e3343663e 280 Gene3D G3DSA:2.40.170.20 87 273 1.2E-24 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS14905 7b37561116e5498b00eb731e3343663e 280 Pfam PF00593 TonB dependent receptor 128 267 3.6E-22 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS14905 7b37561116e5498b00eb731e3343663e 280 SUPERFAMILY SSF56935 128 264 2.78E-21 T 28-03-2018 CJD35_RS15475 aad00c1f2a88e4a704ecd9bc746cf0d8 191 SUPERFAMILY SSF53448 5 186 6.97E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS15475 aad00c1f2a88e4a704ecd9bc746cf0d8 191 Gene3D G3DSA:3.90.550.10 1 168 1.1E-14 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS15475 aad00c1f2a88e4a704ecd9bc746cf0d8 191 Pfam PF01983 Guanylyl transferase CofC like 6 181 5.0E-17 T 28-03-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 CJD35_RS15475 aad00c1f2a88e4a704ecd9bc746cf0d8 191 TIGRFAM TIGR03552 F420_cofC: 2-phospho-L-lactate guanylyltransferase 6 185 2.1E-40 T 28-03-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 CJD35_RS03790 f01b2cd2bfdfae409829a8c60970f6fe 321 SMART SM00382 38 217 1.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS03790 f01b2cd2bfdfae409829a8c60970f6fe 321 Gene3D G3DSA:3.40.50.300 10 320 3.0E-57 T 28-03-2018 CJD35_RS03790 f01b2cd2bfdfae409829a8c60970f6fe 321 SUPERFAMILY SSF52540 13 231 2.72E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03790 f01b2cd2bfdfae409829a8c60970f6fe 321 Pfam PF00005 ABC transporter 30 169 1.5E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS21975 052d65406afca9a69393d4f813cd657e 207 SUPERFAMILY SSF46689 138 185 5.11E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS21975 052d65406afca9a69393d4f813cd657e 207 SMART SM00857 2 136 1.9E-50 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21975 052d65406afca9a69393d4f813cd657e 207 Gene3D G3DSA:3.40.50.1390 1 104 3.6E-31 T 28-03-2018 CJD35_RS21975 052d65406afca9a69393d4f813cd657e 207 Gene3D G3DSA:1.10.10.60 132 168 5.4E-13 T 28-03-2018 CJD35_RS21975 052d65406afca9a69393d4f813cd657e 207 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS21975 052d65406afca9a69393d4f813cd657e 207 SUPERFAMILY SSF53041 1 135 3.79E-41 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21975 052d65406afca9a69393d4f813cd657e 207 Gene3D G3DSA:1.20.5.40 105 131 2.7E-13 T 28-03-2018 CJD35_RS21975 052d65406afca9a69393d4f813cd657e 207 Pfam PF02796 Helix-turn-helix domain of resolvase 138 181 3.6E-9 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21975 052d65406afca9a69393d4f813cd657e 207 Pfam PF00239 Resolvase, N terminal domain 3 135 4.4E-40 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21975 052d65406afca9a69393d4f813cd657e 207 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS21975 052d65406afca9a69393d4f813cd657e 207 Gene3D G3DSA:1.10.260.40 169 198 7.3E-5 T 28-03-2018 CJD35_RS08150 7fc87640d60356562a595207b1d95334 196 PIRSF PIRSF000709 1 105 6.3E-4 T 28-03-2018 CJD35_RS08150 7fc87640d60356562a595207b1d95334 196 Gene3D G3DSA:3.40.50.1240 2 171 8.6E-27 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CJD35_RS08150 7fc87640d60356562a595207b1d95334 196 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 168 1.4E-25 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CJD35_RS08150 7fc87640d60356562a595207b1d95334 196 SMART SM00855 3 158 3.3E-14 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CJD35_RS08150 7fc87640d60356562a595207b1d95334 196 SUPERFAMILY SSF53254 1 193 7.35E-29 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CJD35_RS16370 6ec15c1cddd83743807b66e29ac128a2 293 SUPERFAMILY SSF51735 9 173 2.28E-19 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS16370 6ec15c1cddd83743807b66e29ac128a2 293 Gene3D G3DSA:3.40.50.720 7 172 4.1E-12 T 28-03-2018 CJD35_RS16370 6ec15c1cddd83743807b66e29ac128a2 293 Pfam PF10728 Domain of unknown function (DUF2520) 144 268 2.9E-30 T 28-03-2018 IPR018931 Domain of unknown function DUF2520 CJD35_RS16370 6ec15c1cddd83743807b66e29ac128a2 293 Pfam PF10727 Rossmann-like domain 6 124 1.1E-11 T 28-03-2018 IPR019665 Putative oxidoreductase/dehydrogenase, Rossmann-like domain CJD35_RS16370 6ec15c1cddd83743807b66e29ac128a2 293 SUPERFAMILY SSF48179 176 274 1.77E-19 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS16370 6ec15c1cddd83743807b66e29ac128a2 293 Gene3D G3DSA:1.10.1040.20 174 272 3.4E-28 T 28-03-2018 IPR018931 Domain of unknown function DUF2520 CJD35_RS15605 bfbec7a221fda409e446ad2a6a0fe306 387 Gene3D G3DSA:1.10.540.10 1 121 8.6E-35 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15605 bfbec7a221fda409e446ad2a6a0fe306 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 119 2.3E-28 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15605 bfbec7a221fda409e446ad2a6a0fe306 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 221 1.7E-22 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS15605 bfbec7a221fda409e446ad2a6a0fe306 387 Gene3D G3DSA:1.20.140.10 223 385 3.3E-49 T 28-03-2018 CJD35_RS15605 bfbec7a221fda409e446ad2a6a0fe306 387 SUPERFAMILY SSF47203 231 381 3.54E-43 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS15605 bfbec7a221fda409e446ad2a6a0fe306 387 SUPERFAMILY SSF56645 1 246 4.45E-70 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS15605 bfbec7a221fda409e446ad2a6a0fe306 387 Gene3D G3DSA:2.40.110.10 123 222 1.8E-34 T 28-03-2018 CJD35_RS15605 bfbec7a221fda409e446ad2a6a0fe306 387 PIRSF PIRSF016578 7 384 1.3E-23 T 28-03-2018 CJD35_RS15605 bfbec7a221fda409e446ad2a6a0fe306 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 381 8.9E-37 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS15605 bfbec7a221fda409e446ad2a6a0fe306 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CJD35_RS14985 e18b3db39ffdeee0fd239783b45a7747 529 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 525 4.4E-24 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CJD35_RS14985 e18b3db39ffdeee0fd239783b45a7747 529 SUPERFAMILY SSF52518 15 182 4.61E-36 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS14985 e18b3db39ffdeee0fd239783b45a7747 529 Gene3D G3DSA:3.40.50.970 12 187 1.8E-36 T 28-03-2018 CJD35_RS14985 e18b3db39ffdeee0fd239783b45a7747 529 SUPERFAMILY SSF52518 351 528 9.11E-36 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS14985 e18b3db39ffdeee0fd239783b45a7747 529 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 16 182 4.1E-32 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CJD35_RS14985 e18b3db39ffdeee0fd239783b45a7747 529 Gene3D G3DSA:3.40.50.970 332 529 1.0E-31 T 28-03-2018 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 Gene3D G3DSA:1.10.1240.10 302 387 4.6E-36 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 Gene3D G3DSA:3.20.20.20 1 296 2.8E-68 T 28-03-2018 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 TIGRFAM TIGR02082 metH: methionine synthase 4 835 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 SMART SM01018 307 390 7.0E-42 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 SUPERFAMILY SSF56507 553 866 5.49E-109 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 587 851 6.7E-112 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 Pfam PF02607 B12 binding domain 309 382 2.7E-24 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 SUPERFAMILY SSF51717 9 282 4.06E-88 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 Pfam PF02310 B12 binding domain 399 489 2.9E-20 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 Pfam PF00809 Pterin binding enzyme 13 250 5.9E-55 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 SUPERFAMILY SSF52242 394 543 1.7E-47 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 Gene3D G3DSA:3.10.196.10 606 866 5.7E-92 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 SUPERFAMILY SSF47644 303 388 5.89E-27 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 PIRSF PIRSF000381 1 838 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS09410 687647f847e246376f168d5cc540a2cd 866 Gene3D G3DSA:3.40.50.280 394 546 2.7E-55 T 28-03-2018 CJD35_RS03770 58c889631560626fc7ec0ae47f1befe5 337 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 280 293 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CJD35_RS03770 58c889631560626fc7ec0ae47f1befe5 337 Gene3D G3DSA:3.40.1190.20 10 326 8.7E-63 T 28-03-2018 IPR029056 Ribokinase-like CJD35_RS03770 58c889631560626fc7ec0ae47f1befe5 337 SUPERFAMILY SSF53613 12 324 7.64E-76 T 28-03-2018 IPR029056 Ribokinase-like CJD35_RS03770 58c889631560626fc7ec0ae47f1befe5 337 Pfam PF00294 pfkB family carbohydrate kinase 57 323 1.6E-45 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 Pfam PF01926 50S ribosome-binding GTPase 211 315 1.2E-17 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 232 250 2.6E-8 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 231 2.6E-8 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 278 296 2.6E-8 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 Gene3D G3DSA:3.40.50.300 177 240 3.3E-12 T 28-03-2018 CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 Gene3D G3DSA:3.40.50.300 241 410 6.6E-14 T 28-03-2018 CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 SUPERFAMILY SSF52540 333 382 2.28E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 SUPERFAMILY SSF52540 109 304 2.28E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 PIRSF PIRSF006809 9 444 3.7E-144 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 Hamap MF_00900 GTPase HflX [hflX]. 37 415 44.844 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 Pfam PF16360 GTP-binding GTPase Middle Region 124 203 9.5E-29 T 28-03-2018 IPR032305 GTP-binding protein, middle domain CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 Pfam PF13167 GTP-binding GTPase N-terminal 35 121 4.2E-25 T 28-03-2018 IPR025121 GTPase HflX, N-terminal CJD35_RS13220 a120a8b61db6a3a2da6641571726c681 444 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 17 385 3.9E-134 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 CJD35_RS07950 3422660478c0bdb375b29b50782dfa2a 354 SUPERFAMILY SSF51182 13 351 5.09E-99 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS07950 3422660478c0bdb375b29b50782dfa2a 354 Pfam PF07883 Cupin domain 273 331 2.6E-7 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CJD35_RS07950 3422660478c0bdb375b29b50782dfa2a 354 Pfam PF07883 Cupin domain 100 167 2.4E-20 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CJD35_RS07950 3422660478c0bdb375b29b50782dfa2a 354 Gene3D G3DSA:2.60.120.10 189 346 1.7E-10 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS07950 3422660478c0bdb375b29b50782dfa2a 354 Gene3D G3DSA:2.60.120.10 45 188 2.2E-20 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS07950 3422660478c0bdb375b29b50782dfa2a 354 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 16 352 1.7E-153 T 28-03-2018 IPR011960 Gentisate 1,2-dioxygenase CJD35_RS08845 be00b071687d37264d6edbf257338304 115 Pfam PF01934 Protein of unknown function DUF86 15 108 7.0E-15 T 28-03-2018 IPR008201 Protein of unknown function DUF86 CJD35_RS08845 be00b071687d37264d6edbf257338304 115 Gene3D G3DSA:1.20.120.580 4 113 1.4E-14 T 28-03-2018 IPR008201 Protein of unknown function DUF86 CJD35_RS16695 e21a9a4cc6c34fff9c34e0cd559d1ddc 191 Pfam PF04542 Sigma-70 region 2 26 92 1.4E-14 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS16695 e21a9a4cc6c34fff9c34e0cd559d1ddc 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 48 79 - T 28-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS16695 e21a9a4cc6c34fff9c34e0cd559d1ddc 191 SUPERFAMILY SSF88946 4 100 1.88E-26 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS16695 e21a9a4cc6c34fff9c34e0cd559d1ddc 191 SUPERFAMILY SSF88659 110 185 2.06E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS16695 e21a9a4cc6c34fff9c34e0cd559d1ddc 191 Pfam PF08281 Sigma-70, region 4 128 179 9.9E-14 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS16695 e21a9a4cc6c34fff9c34e0cd559d1ddc 191 Gene3D G3DSA:1.10.1740.10 3 119 3.9E-25 T 28-03-2018 CJD35_RS16695 e21a9a4cc6c34fff9c34e0cd559d1ddc 191 Gene3D G3DSA:1.10.10.10 120 189 8.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16695 e21a9a4cc6c34fff9c34e0cd559d1ddc 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 182 8.4E-31 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS05625 ecee36fa62fe82988f7455fc4d362a22 386 PIRSF PIRSF004640 8 371 2.9E-145 T 28-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CJD35_RS05625 ecee36fa62fe82988f7455fc4d362a22 386 SUPERFAMILY SSF56014 274 356 8.72E-15 T 28-03-2018 CJD35_RS05625 ecee36fa62fe82988f7455fc4d362a22 386 SUPERFAMILY SSF51412 31 133 6.5E-10 T 28-03-2018 CJD35_RS05625 ecee36fa62fe82988f7455fc4d362a22 386 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 16 361 2.9E-136 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CJD35_RS05625 ecee36fa62fe82988f7455fc4d362a22 386 Pfam PF04551 GcpE protein 20 361 3.0E-130 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CJD35_RS05625 ecee36fa62fe82988f7455fc4d362a22 386 Gene3D G3DSA:3.20.20.120 23 215 7.2E-22 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CJD35_RS05625 ecee36fa62fe82988f7455fc4d362a22 386 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 14 365 33.059 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CJD35_RS05645 71132bd9d1b03cd21a6fb421659c6584 268 Pfam PF09140 ATPase MipZ 7 254 1.7E-109 T 28-03-2018 IPR015223 ATPase MipZ CJD35_RS05645 71132bd9d1b03cd21a6fb421659c6584 268 SUPERFAMILY SSF52540 6 231 1.21E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05645 71132bd9d1b03cd21a6fb421659c6584 268 Gene3D G3DSA:3.40.50.300 7 252 4.5E-28 T 28-03-2018 CJD35_RS02320 81b6e04bc4897918f0a8f2b17f06c896 102 Pfam PF07238 PilZ domain 18 93 6.8E-9 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CJD35_RS02320 81b6e04bc4897918f0a8f2b17f06c896 102 Gene3D G3DSA:2.40.10.220 11 99 9.8E-11 T 28-03-2018 CJD35_RS02320 81b6e04bc4897918f0a8f2b17f06c896 102 SUPERFAMILY SSF141371 15 87 2.16E-8 T 28-03-2018 CJD35_RS02945 86a93e4630fc1de12d8af29864962a99 297 Gene3D G3DSA:3.40.630.40 8 290 1.1E-67 T 28-03-2018 CJD35_RS02945 86a93e4630fc1de12d8af29864962a99 297 SUPERFAMILY SSF53187 19 287 9.1E-69 T 28-03-2018 CJD35_RS02945 86a93e4630fc1de12d8af29864962a99 297 Pfam PF05013 N-formylglutamate amidohydrolase 27 258 2.2E-62 T 28-03-2018 IPR007709 N-formylglutamate amidohydrolase CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 Gene3D G3DSA:2.60.34.10 385 526 1.2E-68 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 Gene3D G3DSA:3.30.420.40 1 195 1.0E-82 T 28-03-2018 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 PRINTS PR00301 70kDa heat shock protein signature 360 380 9.9E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 PRINTS PR00301 70kDa heat shock protein signature 138 158 9.9E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 PRINTS PR00301 70kDa heat shock protein signature 329 345 9.9E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 PRINTS PR00301 70kDa heat shock protein signature 3 16 9.9E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 PRINTS PR00301 70kDa heat shock protein signature 54 62 9.9E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 PRINTS PR00301 70kDa heat shock protein signature 383 402 9.9E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 PRINTS PR00301 70kDa heat shock protein signature 464 480 9.9E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 PRINTS PR00301 70kDa heat shock protein signature 197 207 9.9E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 PRINTS PR00301 70kDa heat shock protein signature 31 43 9.9E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 SUPERFAMILY SSF100920 379 535 7.59E-62 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 SUPERFAMILY SSF53067 4 184 1.65E-67 T 28-03-2018 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 SUPERFAMILY SSF100934 502 600 9.68E-17 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 Gene3D G3DSA:1.20.1270.10 527 612 2.0E-22 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 Pfam PF00012 Hsp70 protein 4 599 2.6E-276 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 Gene3D G3DSA:3.30.420.40 196 360 1.0E-49 T 28-03-2018 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 627 37.404 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 598 9.1E-296 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CJD35_RS01950 424cfa115a1b6c43e7141703b9acf29e 632 SUPERFAMILY SSF53067 186 377 1.05E-66 T 28-03-2018 CJD35_RS19620 0dfe9257b71128262cef3f8ed15df31d 507 Pfam PF00665 Integrase core domain 132 261 6.5E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS19620 0dfe9257b71128262cef3f8ed15df31d 507 ProDom PD043187 TRANSPOSASE PLASMID CATALYTIC INTEGRASE DNA-BINDING DNA TRANSPOSITION RECOMBINATION FOR INSERTION 26 128 8.0E-18 T 28-03-2018 CJD35_RS19620 0dfe9257b71128262cef3f8ed15df31d 507 SUPERFAMILY SSF53098 159 299 1.33E-9 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS19620 0dfe9257b71128262cef3f8ed15df31d 507 Gene3D G3DSA:3.30.420.10 138 308 1.2E-15 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS20805 0dfe9257b71128262cef3f8ed15df31d 507 Pfam PF00665 Integrase core domain 132 261 6.5E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS20805 0dfe9257b71128262cef3f8ed15df31d 507 ProDom PD043187 TRANSPOSASE PLASMID CATALYTIC INTEGRASE DNA-BINDING DNA TRANSPOSITION RECOMBINATION FOR INSERTION 26 128 8.0E-18 T 28-03-2018 CJD35_RS20805 0dfe9257b71128262cef3f8ed15df31d 507 SUPERFAMILY SSF53098 159 299 1.33E-9 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS20805 0dfe9257b71128262cef3f8ed15df31d 507 Gene3D G3DSA:3.30.420.10 138 308 1.2E-15 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS06555 0dfe9257b71128262cef3f8ed15df31d 507 Pfam PF00665 Integrase core domain 132 261 6.5E-15 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS06555 0dfe9257b71128262cef3f8ed15df31d 507 ProDom PD043187 TRANSPOSASE PLASMID CATALYTIC INTEGRASE DNA-BINDING DNA TRANSPOSITION RECOMBINATION FOR INSERTION 26 128 8.0E-18 T 28-03-2018 CJD35_RS06555 0dfe9257b71128262cef3f8ed15df31d 507 SUPERFAMILY SSF53098 159 299 1.33E-9 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS06555 0dfe9257b71128262cef3f8ed15df31d 507 Gene3D G3DSA:3.30.420.10 138 308 1.2E-15 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS09695 4d436b60abe602ff7de5b2d015ade7ba 308 SUPERFAMILY SSF103481 192 292 4.71E-10 T 28-03-2018 CJD35_RS09695 4d436b60abe602ff7de5b2d015ade7ba 308 SUPERFAMILY SSF103481 50 152 1.31E-11 T 28-03-2018 CJD35_RS09695 4d436b60abe602ff7de5b2d015ade7ba 308 Pfam PF00892 EamA-like transporter family 18 148 6.6E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS09695 4d436b60abe602ff7de5b2d015ade7ba 308 Pfam PF00892 EamA-like transporter family 159 287 3.9E-7 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS06025 b43d01b6dc12c375c8b93e59e18738c1 487 Gene3D G3DSA:1.10.10.10 18 91 3.3E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS06025 b43d01b6dc12c375c8b93e59e18738c1 487 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 1.9E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS06025 b43d01b6dc12c375c8b93e59e18738c1 487 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 1.9E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS06025 b43d01b6dc12c375c8b93e59e18738c1 487 Gene3D G3DSA:3.40.640.10 124 374 1.8E-44 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS06025 b43d01b6dc12c375c8b93e59e18738c1 487 SMART SM00345 31 90 6.5E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS06025 b43d01b6dc12c375c8b93e59e18738c1 487 SUPERFAMILY SSF53383 109 462 4.68E-78 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS06025 b43d01b6dc12c375c8b93e59e18738c1 487 SUPERFAMILY SSF46785 22 97 3.7E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS06025 b43d01b6dc12c375c8b93e59e18738c1 487 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 88 2.4E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS06025 b43d01b6dc12c375c8b93e59e18738c1 487 Gene3D G3DSA:3.90.1150.10 375 465 5.3E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS06025 b43d01b6dc12c375c8b93e59e18738c1 487 Pfam PF00155 Aminotransferase class I and II 147 459 5.7E-30 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJD35_RS14005 d9da215ba0dafc5a90d782f2c7f86946 459 SUPERFAMILY SSF58104 11 281 1.83E-36 T 28-03-2018 CJD35_RS14005 d9da215ba0dafc5a90d782f2c7f86946 459 SMART SM00283 23 282 2.4E-6 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS14005 d9da215ba0dafc5a90d782f2c7f86946 459 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 112 249 2.3E-20 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS14005 d9da215ba0dafc5a90d782f2c7f86946 459 Gene3D G3DSA:1.10.287.950 48 282 3.1E-29 T 28-03-2018 CJD35_RS14005 d9da215ba0dafc5a90d782f2c7f86946 459 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 121 148 1.9E-15 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS14005 d9da215ba0dafc5a90d782f2c7f86946 459 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 44 73 1.9E-15 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS14005 d9da215ba0dafc5a90d782f2c7f86946 459 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 150 179 1.9E-15 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS14005 d9da215ba0dafc5a90d782f2c7f86946 459 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 198 227 1.9E-15 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 292 409 4.3E-12 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 Gene3D G3DSA:3.30.310.50 403 512 4.3E-13 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 Gene3D G3DSA:3.40.120.10 207 285 5.2E-9 T 28-03-2018 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 Gene3D G3DSA:3.40.120.10 8 194 4.4E-31 T 28-03-2018 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 SUPERFAMILY SSF55957 437 504 4.84E-12 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 190 287 4.6E-10 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 SUPERFAMILY SSF53738 189 289 1.88E-11 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 452 499 3.3E-8 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 35 161 3.1E-24 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 SUPERFAMILY SSF53738 30 198 8.63E-30 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 Gene3D G3DSA:3.40.120.10 286 402 1.9E-16 T 28-03-2018 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 125 134 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS18795 8f492121a20f985c7c143e968da8eab7 518 SUPERFAMILY SSF53738 275 373 6.28E-6 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS14475 b92c6c5b2826c9883cdf1a9559a0e29d 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS14475 b92c6c5b2826c9883cdf1a9559a0e29d 307 SUPERFAMILY SSF46785 6 111 5.14E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS14475 b92c6c5b2826c9883cdf1a9559a0e29d 307 Gene3D G3DSA:3.40.190.10 175 259 4.7E-21 T 28-03-2018 CJD35_RS14475 b92c6c5b2826c9883cdf1a9559a0e29d 307 SUPERFAMILY SSF53850 90 293 1.13E-37 T 28-03-2018 CJD35_RS14475 b92c6c5b2826c9883cdf1a9559a0e29d 307 Gene3D G3DSA:3.40.190.10 91 174 5.3E-13 T 28-03-2018 CJD35_RS14475 b92c6c5b2826c9883cdf1a9559a0e29d 307 Gene3D G3DSA:1.10.10.10 2 83 1.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS14475 b92c6c5b2826c9883cdf1a9559a0e29d 307 Pfam PF03466 LysR substrate binding domain 89 287 1.7E-35 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS14350 41cae96f114a9e4c539b48cd6fc48047 100 SUPERFAMILY SSF47226 11 95 5.36E-9 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJD35_RS14350 41cae96f114a9e4c539b48cd6fc48047 100 Gene3D G3DSA:1.20.120.160 3 100 7.3E-9 T 28-03-2018 CJD35_RS11690 f93b444829921628c22f29baaae43896 506 Pfam PF00501 AMP-binding enzyme 22 412 8.3E-78 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJD35_RS11690 f93b444829921628c22f29baaae43896 506 Pfam PF13193 AMP-binding enzyme C-terminal domain 421 494 6.1E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CJD35_RS11690 f93b444829921628c22f29baaae43896 506 PRINTS PR00154 AMP-binding signature 166 174 2.9E-5 T 28-03-2018 IPR020459 AMP-binding CJD35_RS11690 f93b444829921628c22f29baaae43896 506 PRINTS PR00154 AMP-binding signature 154 165 2.9E-5 T 28-03-2018 IPR020459 AMP-binding CJD35_RS11690 f93b444829921628c22f29baaae43896 506 Gene3D G3DSA:3.40.50.980 13 161 7.7E-32 T 28-03-2018 CJD35_RS11690 f93b444829921628c22f29baaae43896 506 ProSitePatterns PS00455 Putative AMP-binding domain signature. 159 170 - T 28-03-2018 IPR020845 AMP-binding, conserved site CJD35_RS11690 f93b444829921628c22f29baaae43896 506 Gene3D G3DSA:3.30.300.30 406 505 1.5E-24 T 28-03-2018 CJD35_RS11690 f93b444829921628c22f29baaae43896 506 TIGRFAM TIGR03098 ligase_PEP_1: acyl-CoA ligase (AMP-forming), exosortase A-associated 19 502 2.2E-183 T 28-03-2018 IPR017529 Acyl-CoA ligase (AMP-forming), exosortase system type 1 associated CJD35_RS11690 f93b444829921628c22f29baaae43896 506 Gene3D G3DSA:3.40.50.980 162 320 5.6E-43 T 28-03-2018 CJD35_RS11690 f93b444829921628c22f29baaae43896 506 Gene3D G3DSA:2.30.38.10 321 405 2.6E-17 T 28-03-2018 CJD35_RS11690 f93b444829921628c22f29baaae43896 506 SUPERFAMILY SSF56801 21 504 1.15E-122 T 28-03-2018 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 SMART SM00382 213 358 1.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 SMART SM00382 494 661 3.2E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 218 350 2.6E-12 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 SUPERFAMILY SSF52540 444 734 7.25E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 Gene3D G3DSA:1.10.1780.10 3 144 6.4E-24 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 Gene3D G3DSA:3.40.50.300 172 357 1.2E-24 T 28-03-2018 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 540 558 3.8E-38 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 569 587 3.8E-38 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 498 516 3.8E-38 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 616 3.8E-38 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 309 321 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 Gene3D G3DSA:1.10.8.60 358 444 4.7E-26 T 28-03-2018 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 SMART SM01086 660 753 1.9E-28 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 Gene3D G3DSA:3.40.50.300 448 659 2.7E-46 T 28-03-2018 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 663 740 9.5E-21 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 SUPERFAMILY SSF81923 5 143 7.19E-53 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 SUPERFAMILY SSF52540 175 433 2.49E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 15 64 1.0E-9 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 7 741 0.0 T 28-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 525 543 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 Gene3D G3DSA:1.10.8.60 660 767 3.3E-18 T 28-03-2018 CJD35_RS00255 347ec59d547b83c0938ad0531abfd029 776 Pfam PF07724 AAA domain (Cdc48 subfamily) 493 654 1.8E-48 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS08795 0ffa30a2a5a3f8d9f0d6f3c6cda0c969 400 SUPERFAMILY SSF53383 4 396 2.48E-104 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS08795 0ffa30a2a5a3f8d9f0d6f3c6cda0c969 400 Gene3D G3DSA:3.40.640.10 54 273 2.5E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS08795 0ffa30a2a5a3f8d9f0d6f3c6cda0c969 400 Gene3D G3DSA:3.90.1150.10 274 400 2.5E-31 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS08795 0ffa30a2a5a3f8d9f0d6f3c6cda0c969 400 Pfam PF00155 Aminotransferase class I and II 32 392 2.8E-72 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJD35_RS08795 0ffa30a2a5a3f8d9f0d6f3c6cda0c969 400 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CJD35_RS08810 47f5ce93256ef63c05199b2c28eb244b 177 Gene3D G3DSA:3.10.20.80 11 87 5.8E-28 T 28-03-2018 CJD35_RS08810 47f5ce93256ef63c05199b2c28eb244b 177 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 17 82 5.9E-28 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CJD35_RS08810 47f5ce93256ef63c05199b2c28eb244b 177 SUPERFAMILY SSF55200 93 177 5.49E-33 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CJD35_RS08810 47f5ce93256ef63c05199b2c28eb244b 177 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 177 27.174 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CJD35_RS08810 47f5ce93256ef63c05199b2c28eb244b 177 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 93 177 2.8E-38 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CJD35_RS08810 47f5ce93256ef63c05199b2c28eb244b 177 Gene3D G3DSA:3.30.110.10 88 177 9.8E-35 T 28-03-2018 CJD35_RS08810 47f5ce93256ef63c05199b2c28eb244b 177 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 17 177 2.1E-61 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CJD35_RS08810 47f5ce93256ef63c05199b2c28eb244b 177 SUPERFAMILY SSF54364 13 87 1.57E-26 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CJD35_RS07760 63b56c1529f37d64ce4e602030795243 401 Pfam PF13458 Periplasmic binding protein 70 386 2.2E-25 T 28-03-2018 IPR028081 Leucine-binding protein domain CJD35_RS07760 63b56c1529f37d64ce4e602030795243 401 Gene3D G3DSA:3.40.50.2300 69 178 1.1E-16 T 28-03-2018 CJD35_RS07760 63b56c1529f37d64ce4e602030795243 401 Gene3D G3DSA:3.40.50.2300 179 335 1.6E-28 T 28-03-2018 CJD35_RS07760 63b56c1529f37d64ce4e602030795243 401 SUPERFAMILY SSF53822 70 391 1.93E-63 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 PIRSF PIRSF000185 23 449 3.0E-118 T 28-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 SUPERFAMILY SSF53223 9 198 1.7E-74 T 28-03-2018 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 SMART SM00839 206 447 2.8E-84 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 2.4E-32 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 373 384 2.4E-32 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 237 257 2.4E-32 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 195 217 2.4E-32 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 Gene3D G3DSA:3.40.50.720 211 374 6.7E-43 T 28-03-2018 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 204 447 1.8E-85 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 Gene3D G3DSA:3.40.50.10860 62 191 1.2E-55 T 28-03-2018 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 Gene3D G3DSA:1.10.285.10 375 449 3.7E-23 T 28-03-2018 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 Gene3D G3DSA:1.10.285.10 7 61 1.1E-7 T 28-03-2018 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 186 5.6E-50 T 28-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 123 136 - T 28-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS21480 05abe11d65fd1d9afe4c967fb0eb2c18 449 SUPERFAMILY SSF51735 204 448 2.13E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 PIRSF PIRSF000185 23 449 3.0E-118 T 28-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 SUPERFAMILY SSF53223 9 198 1.7E-74 T 28-03-2018 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 SMART SM00839 206 447 2.8E-84 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 2.4E-32 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 373 384 2.4E-32 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 237 257 2.4E-32 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 195 217 2.4E-32 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 Gene3D G3DSA:3.40.50.720 211 374 6.7E-43 T 28-03-2018 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 204 447 1.8E-85 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 Gene3D G3DSA:3.40.50.10860 62 191 1.2E-55 T 28-03-2018 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 Gene3D G3DSA:1.10.285.10 375 449 3.7E-23 T 28-03-2018 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 Gene3D G3DSA:1.10.285.10 7 61 1.1E-7 T 28-03-2018 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 186 5.6E-50 T 28-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 123 136 - T 28-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CJD35_RS18360 05abe11d65fd1d9afe4c967fb0eb2c18 449 SUPERFAMILY SSF51735 204 448 2.13E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS05930 dc14ef38c1005c6da0763a82bcdbbff1 165 Pfam PF01613 Flavin reductase like domain 17 160 1.2E-38 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CJD35_RS05930 dc14ef38c1005c6da0763a82bcdbbff1 165 SUPERFAMILY SSF50475 7 160 1.3E-49 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CJD35_RS05930 dc14ef38c1005c6da0763a82bcdbbff1 165 Gene3D G3DSA:2.30.110.10 2 162 3.6E-49 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CJD35_RS05930 dc14ef38c1005c6da0763a82bcdbbff1 165 SMART SM00903 16 160 2.7E-58 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CJD35_RS19100 4dbf627499b32d67a7fa15227296dd46 380 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 49 121 9.2E-6 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS19100 4dbf627499b32d67a7fa15227296dd46 380 Gene3D G3DSA:1.10.150.130 30 142 7.7E-13 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS19100 4dbf627499b32d67a7fa15227296dd46 380 Pfam PF00589 Phage integrase family 168 355 2.6E-12 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19100 4dbf627499b32d67a7fa15227296dd46 380 SUPERFAMILY SSF56349 42 358 2.56E-29 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS19100 4dbf627499b32d67a7fa15227296dd46 380 Gene3D G3DSA:1.10.443.10 165 358 1.1E-24 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20280 4dbf627499b32d67a7fa15227296dd46 380 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 49 121 9.2E-6 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS20280 4dbf627499b32d67a7fa15227296dd46 380 Gene3D G3DSA:1.10.150.130 30 142 7.7E-13 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20280 4dbf627499b32d67a7fa15227296dd46 380 Pfam PF00589 Phage integrase family 168 355 2.6E-12 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20280 4dbf627499b32d67a7fa15227296dd46 380 SUPERFAMILY SSF56349 42 358 2.56E-29 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS20280 4dbf627499b32d67a7fa15227296dd46 380 Gene3D G3DSA:1.10.443.10 165 358 1.1E-24 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS21960 d982df258932b092fd6d8a8fdfb3ca98 106 SUPERFAMILY SSF50249 8 101 7.2E-16 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS21960 d982df258932b092fd6d8a8fdfb3ca98 106 PIRSF PIRSF002070 1 106 7.4E-13 T 28-03-2018 CJD35_RS21960 d982df258932b092fd6d8a8fdfb3ca98 106 Gene3D G3DSA:2.40.50.140 1 106 3.3E-18 T 28-03-2018 CJD35_RS21960 d982df258932b092fd6d8a8fdfb3ca98 106 Pfam PF00436 Single-strand binding protein family 12 95 5.7E-12 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CJD35_RS10885 d267d577d12bf6815a654134b9a53b98 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CJD35_RS10885 d267d577d12bf6815a654134b9a53b98 258 SUPERFAMILY SSF52096 1 258 2.16E-86 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS10885 d267d577d12bf6815a654134b9a53b98 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 257 9.1E-76 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS10885 d267d577d12bf6815a654134b9a53b98 258 Gene3D G3DSA:3.90.226.10 2 218 1.5E-69 T 28-03-2018 CJD35_RS10885 d267d577d12bf6815a654134b9a53b98 258 Gene3D G3DSA:1.10.12.10 219 256 2.4E-17 T 28-03-2018 IPR014748 Crontonase, C-terminal CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 SMART SM00487 2 188 1.1E-17 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 SUPERFAMILY SSF52540 191 438 2.35E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 SMART SM00490 227 326 1.8E-14 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 Pfam PF08482 ATP-dependent helicase C-terminal 697 829 1.2E-44 T 28-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 482 9.7E-174 T 28-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 Gene3D G3DSA:3.40.50.300 181 344 3.9E-40 T 28-03-2018 CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 PIRSF PIRSF005496 509 843 2.5E-91 T 28-03-2018 CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 PIRSF PIRSF005496 1 495 7.3E-190 T 28-03-2018 CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 Pfam PF00271 Helicase conserved C-terminal domain 205 325 1.9E-12 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 SMART SM00847 386 479 4.9E-17 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 118 127 - T 28-03-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 Gene3D G3DSA:3.40.50.300 3 162 2.5E-23 T 28-03-2018 CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 Pfam PF04408 Helicase associated domain (HA2) 387 450 1.2E-11 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 Pfam PF00270 DEAD/DEAH box helicase 17 160 1.9E-6 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJD35_RS10545 922dd4ed9f06decafe0a048532789e04 847 SUPERFAMILY SSF52540 14 159 4.21E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04935 a2b6897a1f4dc65b7ca874916b157511 240 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 240 39.579 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CJD35_RS04935 a2b6897a1f4dc65b7ca874916b157511 240 SMART SM00849 12 170 1.0E-29 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS04935 a2b6897a1f4dc65b7ca874916b157511 240 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 171 230 2.4E-18 T 28-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CJD35_RS04935 a2b6897a1f4dc65b7ca874916b157511 240 Gene3D G3DSA:3.60.15.10 1 239 4.0E-55 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS04935 a2b6897a1f4dc65b7ca874916b157511 240 SUPERFAMILY SSF56281 2 225 1.82E-63 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS04935 a2b6897a1f4dc65b7ca874916b157511 240 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 231 1.3E-91 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CJD35_RS04935 a2b6897a1f4dc65b7ca874916b157511 240 PIRSF PIRSF005457 1 240 2.1E-96 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CJD35_RS04935 a2b6897a1f4dc65b7ca874916b157511 240 Pfam PF00753 Metallo-beta-lactamase superfamily 24 170 1.6E-15 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS20050 d711141f614877ee1f8aaeaf5d6035d4 86 Gene3D G3DSA:3.40.1620.10 3 50 2.6E-10 T 28-03-2018 CJD35_RS20050 d711141f614877ee1f8aaeaf5d6035d4 86 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 19 51 7.8E-7 T 28-03-2018 CJD35_RS20050 d711141f614877ee1f8aaeaf5d6035d4 86 SUPERFAMILY SSF143120 3 50 4.32E-12 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CJD35_RS20050 d711141f614877ee1f8aaeaf5d6035d4 86 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 62 3.6E-11 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CJD35_RS12430 83ed9fd91c7189f7ad4cca57654a4a56 435 Gene3D G3DSA:3.20.20.70 16 375 4.2E-36 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS12430 83ed9fd91c7189f7ad4cca57654a4a56 435 PIRSF PIRSF000167 3 435 3.6E-143 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CJD35_RS12430 83ed9fd91c7189f7ad4cca57654a4a56 435 Pfam PF04055 Radical SAM superfamily 52 220 2.7E-20 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS12430 83ed9fd91c7189f7ad4cca57654a4a56 435 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 11 434 8.1E-99 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CJD35_RS12430 83ed9fd91c7189f7ad4cca57654a4a56 435 SMART SM00729 46 265 6.2E-43 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS12430 83ed9fd91c7189f7ad4cca57654a4a56 435 SUPERFAMILY SSF102114 5 424 3.34E-103 T 28-03-2018 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 Gene3D G3DSA:1.10.8.50 133 270 4.5E-47 T 28-03-2018 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 131 220 2.0E-21 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 SUPERFAMILY SSF46946 132 222 6.92E-27 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 SMART SM00898 2 115 1.6E-41 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 2.5E-28 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 269 2.5E-75 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 270 40.065 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 SUPERFAMILY SSF57716 219 270 5.7E-14 T 28-03-2018 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 SUPERFAMILY SSF81624 2 140 9.94E-33 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 SMART SM01232 131 223 3.5E-44 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 Gene3D G3DSA:3.20.190.10 2 132 6.9E-34 T 28-03-2018 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 Pfam PF06827 Zinc finger found in FPG and IleRS 248 270 4.3E-6 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CJD35_RS08865 b2a33e5082acec822865beae3239fdf7 270 ProSitePatterns PS01242 Zinc finger FPG-type signature. 246 269 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CJD35_RS05125 48806bd89fe6f85978eefccb3997cc69 1195 Pfam PF00176 SNF2 family N-terminal domain 511 763 4.2E-39 T 28-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CJD35_RS05125 48806bd89fe6f85978eefccb3997cc69 1195 SUPERFAMILY SSF52540 483 698 1.21E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05125 48806bd89fe6f85978eefccb3997cc69 1195 Gene3D G3DSA:3.40.50.300 792 967 1.6E-24 T 28-03-2018 CJD35_RS05125 48806bd89fe6f85978eefccb3997cc69 1195 SUPERFAMILY SSF52540 729 964 9.61E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05125 48806bd89fe6f85978eefccb3997cc69 1195 Gene3D G3DSA:3.40.50.10810 479 727 4.1E-44 T 28-03-2018 CJD35_RS05125 48806bd89fe6f85978eefccb3997cc69 1195 SMART SM00490 834 921 3.9E-18 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS05125 48806bd89fe6f85978eefccb3997cc69 1195 Pfam PF00271 Helicase conserved C-terminal domain 816 921 1.0E-13 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS05125 48806bd89fe6f85978eefccb3997cc69 1195 SMART SM00487 490 697 9.5E-26 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS22160 39610e712f1863408cd453e9d903f9b4 351 Gene3D G3DSA:3.40.50.720 1 192 6.6E-39 T 28-03-2018 CJD35_RS22160 39610e712f1863408cd453e9d903f9b4 351 Gene3D G3DSA:3.90.25.10 193 348 1.5E-46 T 28-03-2018 CJD35_RS22160 39610e712f1863408cd453e9d903f9b4 351 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 321 2.0E-94 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS22160 39610e712f1863408cd453e9d903f9b4 351 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 335 1.2E-145 T 28-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CJD35_RS22160 39610e712f1863408cd453e9d903f9b4 351 SUPERFAMILY SSF51735 1 338 1.01E-91 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS18780 cd5deb9d758516c4d243b5bd01ad987d 278 Gene3D G3DSA:2.60.120.10 112 182 1.6E-14 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS18780 cd5deb9d758516c4d243b5bd01ad987d 278 Gene3D G3DSA:2.60.120.10 43 111 0.021 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS18780 cd5deb9d758516c4d243b5bd01ad987d 278 SUPERFAMILY SSF51182 25 234 5.58E-37 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS05490 bd28451f64812973ad10a945de83a78d 104 SUPERFAMILY SSF46785 3 85 2.17E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05490 bd28451f64812973ad10a945de83a78d 104 SMART SM00418 7 89 1.5E-16 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS05490 bd28451f64812973ad10a945de83a78d 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 2.6E-14 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS05490 bd28451f64812973ad10a945de83a78d 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 2.6E-14 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS05490 bd28451f64812973ad10a945de83a78d 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 9 24 2.6E-14 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS05490 bd28451f64812973ad10a945de83a78d 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 2.6E-14 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS05490 bd28451f64812973ad10a945de83a78d 104 Gene3D G3DSA:1.10.10.10 1 97 4.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05490 bd28451f64812973ad10a945de83a78d 104 Pfam PF12840 Helix-turn-helix domain 6 64 2.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 282 336 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 280 301 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 169 181 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 403 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 123 147 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 200 218 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 326 341 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 28 53 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 95 118 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 413 432 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 350 371 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 463 484 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 PRINTS PR01165 Cytochrome c oxidase subunit I signature 229 248 4.1E-150 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 Gene3D G3DSA:1.20.210.10 24 561 3.5E-249 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 29 558 1.8E-215 T 28-03-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005507|GO:0005886|GO:0006810|GO:0022900|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 SUPERFAMILY SSF81442 25 559 2.22E-213 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08280 e2477b931caf4b0cc876621bd96ccd93 564 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 37 502 6.8E-153 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS10315 3f4b27a7b2ed756c6d97b0a4422ce278 319 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 11 294 36.19 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CJD35_RS10315 3f4b27a7b2ed756c6d97b0a4422ce278 319 Pfam PF02401 LytB protein 15 290 3.1E-86 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CJD35_RS10315 3f4b27a7b2ed756c6d97b0a4422ce278 319 Gene3D G3DSA:3.40.50.2300 5 298 6.3E-4 T 28-03-2018 CJD35_RS10315 3f4b27a7b2ed756c6d97b0a4422ce278 319 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 14 291 9.6E-96 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CJD35_RS13615 0f9ca30c3dee9dfa3ec37341025f2a8d 213 Pfam PF01844 HNH endonuclease 163 205 3.5E-12 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CJD35_RS13615 0f9ca30c3dee9dfa3ec37341025f2a8d 213 SMART SM00507 150 201 4.9E-13 T 28-03-2018 IPR003615 HNH nuclease CJD35_RS13615 0f9ca30c3dee9dfa3ec37341025f2a8d 213 Gene3D G3DSA:3.40.1800.10 143 212 7.3E-19 T 28-03-2018 CJD35_RS12695 e00b29efb01f0dd712c3d255efe8913e 408 Gene3D G3DSA:3.40.630.10 84 400 8.0E-44 T 28-03-2018 CJD35_RS12695 e00b29efb01f0dd712c3d255efe8913e 408 PIRSF PIRSF037238 8 397 1.6E-80 T 28-03-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase CJD35_RS12695 e00b29efb01f0dd712c3d255efe8913e 408 SUPERFAMILY SSF55031 203 313 2.09E-19 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS12695 e00b29efb01f0dd712c3d255efe8913e 408 Pfam PF01546 Peptidase family M20/M25/M40 97 393 6.3E-19 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CJD35_RS12695 e00b29efb01f0dd712c3d255efe8913e 408 SUPERFAMILY SSF53187 19 211 1.97E-35 T 28-03-2018 CJD35_RS12695 e00b29efb01f0dd712c3d255efe8913e 408 SUPERFAMILY SSF53187 322 397 1.97E-35 T 28-03-2018 CJD35_RS12695 e00b29efb01f0dd712c3d255efe8913e 408 Pfam PF07687 Peptidase dimerisation domain 201 299 9.1E-16 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS12695 e00b29efb01f0dd712c3d255efe8913e 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 96 105 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CJD35_RS16495 1ed44630cfb14a8f192362dec4e3a6d4 222 TIGRFAM TIGR01493 HAD-SF-IA-v2: HAD hydrolase, family IA, variant 2 8 183 2.1E-11 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CJD35_RS16495 1ed44630cfb14a8f192362dec4e3a6d4 222 TIGRFAM TIGR01428 HAD_type_II: haloacid dehalogenase, type II 7 200 1.2E-45 T 28-03-2018 IPR006328 L-2-Haloacid dehalogenase GO:0008152|GO:0019120 KEGG: 00361+3.8.1.2|KEGG: 00625+3.8.1.2|MetaCyc: PWY-7425 CJD35_RS16495 1ed44630cfb14a8f192362dec4e3a6d4 222 Gene3D G3DSA:3.40.50.1000 86 208 1.9E-9 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS16495 1ed44630cfb14a8f192362dec4e3a6d4 222 Gene3D G3DSA:1.10.150.240 30 85 2.1E-4 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CJD35_RS16495 1ed44630cfb14a8f192362dec4e3a6d4 222 SUPERFAMILY SSF56784 6 220 1.34E-33 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS16495 1ed44630cfb14a8f192362dec4e3a6d4 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 94 184 7.9E-6 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS15510 4557ddc80f63dc186750c785d6a2bda6 364 SUPERFAMILY SSF89796 6 342 2.62E-95 T 28-03-2018 IPR023606 CoA-transferase family III domain CJD35_RS15510 4557ddc80f63dc186750c785d6a2bda6 364 Pfam PF02515 CoA-transferase family III 8 340 3.8E-69 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 CJD35_RS15510 4557ddc80f63dc186750c785d6a2bda6 364 Gene3D G3DSA:3.40.50.10540 2 358 2.3E-90 T 28-03-2018 IPR023606 CoA-transferase family III domain CJD35_RS02990 baa88f51c607acfdbdd77ec1feaa5142 156 Gene3D G3DSA:3.40.1280.10 5 155 1.9E-34 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJD35_RS02990 baa88f51c607acfdbdd77ec1feaa5142 156 PIRSF PIRSF029256 4 156 1.1E-46 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CJD35_RS02990 baa88f51c607acfdbdd77ec1feaa5142 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 5 154 26.913 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CJD35_RS02990 baa88f51c607acfdbdd77ec1feaa5142 156 Pfam PF00588 SpoU rRNA Methylase family 5 144 1.5E-28 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CJD35_RS02990 baa88f51c607acfdbdd77ec1feaa5142 156 SUPERFAMILY SSF75217 6 151 6.21E-37 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CJD35_RS13155 59111ecfe2a239eda4059ca18deca86d 348 SUPERFAMILY SSF53955 29 348 1.67E-83 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS13155 59111ecfe2a239eda4059ca18deca86d 348 Gene3D G3DSA:1.10.8.350 107 209 1.3E-27 T 28-03-2018 CJD35_RS13155 59111ecfe2a239eda4059ca18deca86d 348 Pfam PF13406 Transglycosylase SLT domain 37 345 9.7E-95 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 CJD35_RS13155 59111ecfe2a239eda4059ca18deca86d 348 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 36 347 8.8E-89 T 28-03-2018 IPR011970 Lytic murein transglycosylase CJD35_RS13155 59111ecfe2a239eda4059ca18deca86d 348 Gene3D G3DSA:1.10.530.10 215 348 3.1E-36 T 28-03-2018 CJD35_RS19335 50778e4565e8d95355cb7d5274c01457 371 SUPERFAMILY SSF46785 157 262 4.22E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19335 50778e4565e8d95355cb7d5274c01457 371 Gene3D G3DSA:1.10.10.10 24 167 5.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19335 50778e4565e8d95355cb7d5274c01457 371 Gene3D G3DSA:1.10.10.10 171 271 2.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19335 50778e4565e8d95355cb7d5274c01457 371 Pfam PF01051 Initiator Replication protein 42 258 7.2E-26 T 28-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CJD35_RS19035 ab12e9dde6f93a345359280d3198889d 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 67 83 3.3E-11 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJD35_RS19035 ab12e9dde6f93a345359280d3198889d 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 139 157 3.3E-11 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJD35_RS19035 ab12e9dde6f93a345359280d3198889d 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 43 59 3.3E-11 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJD35_RS19035 ab12e9dde6f93a345359280d3198889d 163 Gene3D G3DSA:1.20.1260.10 4 163 5.8E-49 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS19035 ab12e9dde6f93a345359280d3198889d 163 Pfam PF00210 Ferritin-like domain 23 163 9.6E-30 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CJD35_RS19035 ab12e9dde6f93a345359280d3198889d 163 PIRSF PIRSF005900 3 163 5.7E-45 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJD35_RS19035 ab12e9dde6f93a345359280d3198889d 163 ProSitePatterns PS00819 Dps protein family signature 2. 69 83 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CJD35_RS19035 ab12e9dde6f93a345359280d3198889d 163 SUPERFAMILY SSF47240 10 162 2.57E-49 T 28-03-2018 IPR009078 Ferritin-like superfamily CJD35_RS08240 9d582b4528f2c182feb763762259c700 239 SUPERFAMILY SSF46894 135 234 3.4E-23 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS08240 9d582b4528f2c182feb763762259c700 239 SUPERFAMILY SSF52172 3 124 1.57E-41 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS08240 9d582b4528f2c182feb763762259c700 239 Pfam PF00072 Response regulator receiver domain 8 116 6.6E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS08240 9d582b4528f2c182feb763762259c700 239 Gene3D G3DSA:1.10.10.10 128 238 1.8E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS08240 9d582b4528f2c182feb763762259c700 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 232 2.2E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS08240 9d582b4528f2c182feb763762259c700 239 SMART SM00448 5 115 3.2E-44 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS08240 9d582b4528f2c182feb763762259c700 239 Gene3D G3DSA:3.40.50.2300 1 127 3.4E-37 T 28-03-2018 CJD35_RS08240 9d582b4528f2c182feb763762259c700 239 SMART SM00862 156 232 2.5E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS04850 21687ccc688bd9babc2e6031469ae26a 1147 Gene3D G3DSA:3.40.50.300 599 1147 2.5E-19 T 28-03-2018 CJD35_RS04850 21687ccc688bd9babc2e6031469ae26a 1147 Gene3D G3DSA:3.40.50.300 1 228 6.7E-35 T 28-03-2018 CJD35_RS04850 21687ccc688bd9babc2e6031469ae26a 1147 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1139 19.752 T 28-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 CJD35_RS04850 21687ccc688bd9babc2e6031469ae26a 1147 SUPERFAMILY SSF75553 484 622 2.62E-5 T 28-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 CJD35_RS04850 21687ccc688bd9babc2e6031469ae26a 1147 Gene3D G3DSA:1.20.120.330 366 507 0.0038 T 28-03-2018 CJD35_RS04850 21687ccc688bd9babc2e6031469ae26a 1147 PIRSF PIRSF005719 558 1146 5.4E-96 T 28-03-2018 IPR024704 Structural maintenance of chromosomes protein CJD35_RS04850 21687ccc688bd9babc2e6031469ae26a 1147 PIRSF PIRSF005719 1 545 2.7E-101 T 28-03-2018 IPR024704 Structural maintenance of chromosomes protein CJD35_RS04850 21687ccc688bd9babc2e6031469ae26a 1147 SUPERFAMILY SSF52540 933 1136 4.59E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04850 21687ccc688bd9babc2e6031469ae26a 1147 SUPERFAMILY SSF52540 1 212 4.59E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04850 21687ccc688bd9babc2e6031469ae26a 1147 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1130 3.3E-54 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CJD35_RS18235 d06698b81c2e467d1f9ba55af21b54f2 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 8.9E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS18235 d06698b81c2e467d1f9ba55af21b54f2 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 8.9E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS18235 d06698b81c2e467d1f9ba55af21b54f2 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJD35_RS18235 d06698b81c2e467d1f9ba55af21b54f2 206 Gene3D G3DSA:1.10.10.60 1 42 1.7E-12 T 28-03-2018 CJD35_RS18235 d06698b81c2e467d1f9ba55af21b54f2 206 Gene3D G3DSA:1.10.260.40 43 69 5.1E-10 T 28-03-2018 CJD35_RS18235 d06698b81c2e467d1f9ba55af21b54f2 206 SUPERFAMILY SSF46689 10 82 6.16E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS18235 d06698b81c2e467d1f9ba55af21b54f2 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 5.1E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS18235 d06698b81c2e467d1f9ba55af21b54f2 206 Gene3D G3DSA:1.10.357.10 70 201 1.3E-20 T 28-03-2018 CJD35_RS18235 d06698b81c2e467d1f9ba55af21b54f2 206 SUPERFAMILY SSF48498 91 203 7.31E-25 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS21355 d06698b81c2e467d1f9ba55af21b54f2 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 8.9E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS21355 d06698b81c2e467d1f9ba55af21b54f2 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 8.9E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS21355 d06698b81c2e467d1f9ba55af21b54f2 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJD35_RS21355 d06698b81c2e467d1f9ba55af21b54f2 206 Gene3D G3DSA:1.10.10.60 1 42 1.7E-12 T 28-03-2018 CJD35_RS21355 d06698b81c2e467d1f9ba55af21b54f2 206 Gene3D G3DSA:1.10.260.40 43 69 5.1E-10 T 28-03-2018 CJD35_RS21355 d06698b81c2e467d1f9ba55af21b54f2 206 SUPERFAMILY SSF46689 10 82 6.16E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS21355 d06698b81c2e467d1f9ba55af21b54f2 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 5.1E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS21355 d06698b81c2e467d1f9ba55af21b54f2 206 Gene3D G3DSA:1.10.357.10 70 201 1.3E-20 T 28-03-2018 CJD35_RS21355 d06698b81c2e467d1f9ba55af21b54f2 206 SUPERFAMILY SSF48498 91 203 7.31E-25 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS14585 85adf939f518306eb7635ae9b9a01f94 433 PIRSF PIRSF000412 7 433 1.5E-169 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CJD35_RS14585 85adf939f518306eb7635ae9b9a01f94 433 Pfam PF00464 Serine hydroxymethyltransferase 21 397 6.0E-177 T 28-03-2018 CJD35_RS14585 85adf939f518306eb7635ae9b9a01f94 433 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 234 250 - T 28-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CJD35_RS14585 85adf939f518306eb7635ae9b9a01f94 433 SUPERFAMILY SSF53383 15 433 2.95E-179 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS14585 85adf939f518306eb7635ae9b9a01f94 433 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 19 433 51.9 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CJD35_RS14585 85adf939f518306eb7635ae9b9a01f94 433 Gene3D G3DSA:3.40.640.10 49 286 1.5E-50 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS14585 85adf939f518306eb7635ae9b9a01f94 433 Gene3D G3DSA:3.90.1150.10 287 433 1.7E-59 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS00500 a18828a0c89b6fa285671a24e2434bd3 209 Pfam PF01081 KDPG and KHG aldolase 8 196 6.6E-71 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CJD35_RS00500 a18828a0c89b6fa285671a24e2434bd3 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 203 9.4E-68 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CJD35_RS00500 a18828a0c89b6fa285671a24e2434bd3 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 127 140 - T 28-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CJD35_RS00500 a18828a0c89b6fa285671a24e2434bd3 209 Gene3D G3DSA:3.20.20.70 6 207 6.8E-28 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS00500 a18828a0c89b6fa285671a24e2434bd3 209 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 28-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CJD35_RS00500 a18828a0c89b6fa285671a24e2434bd3 209 SUPERFAMILY SSF51569 3 204 1.32E-61 T 28-03-2018 CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 376 2.1E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 SUPERFAMILY SSF55785 29 142 1.83E-27 T 28-03-2018 IPR000014 PAS domain CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 Pfam PF00989 PAS fold 22 130 3.7E-17 T 28-03-2018 IPR013767 PAS fold GO:0006355 CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 17 140 9.5E-30 T 28-03-2018 IPR000014 PAS domain CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 Gene3D G3DSA:3.30.450.20 14 142 1.0E-24 T 28-03-2018 CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 SMART SM00387 269 378 2.7E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 SUPERFAMILY SSF47384 152 224 2.75E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 SMART SM00091 18 84 1.8E-11 T 28-03-2018 IPR000014 PAS domain CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 Gene3D G3DSA:1.10.287.130 143 223 6.5E-8 T 28-03-2018 CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 SMART SM00388 156 227 1.1E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 323 4.8E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 337 4.8E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 PRINTS PR00344 Bacterial sensor protein C-terminal signature 338 356 4.8E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 Gene3D G3DSA:3.30.565.10 227 378 2.4E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 SUPERFAMILY SSF55874 217 374 2.62E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13995 9e7dad2fe56b49be24e05b9e522a07de 378 Pfam PF00512 His Kinase A (phospho-acceptor) domain 157 225 8.5E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 PIRSF PIRSF016578 229 381 8.1E-17 T 28-03-2018 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 PIRSF PIRSF016578 1 193 2.1E-8 T 28-03-2018 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 Gene3D G3DSA:1.10.540.10 1 120 3.3E-31 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 Gene3D G3DSA:1.20.140.10 219 381 1.7E-59 T 28-03-2018 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 217 2.1E-24 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 SUPERFAMILY SSF47203 228 380 7.89E-59 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 116 2.2E-28 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 Gene3D G3DSA:2.40.110.10 122 218 2.3E-36 T 28-03-2018 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 379 2.5E-49 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS10910 906723370d670c3ce918ab3d7ff1704a 381 SUPERFAMILY SSF56645 4 242 3.53E-77 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS13235 3ec942d738734e1fe9d183dfd83ad05c 238 Gene3D G3DSA:3.20.20.70 18 228 5.5E-43 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS13235 3ec942d738734e1fe9d183dfd83ad05c 238 SUPERFAMILY SSF51391 26 218 6.8E-60 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CJD35_RS13235 3ec942d738734e1fe9d183dfd83ad05c 238 Pfam PF02581 Thiamine monophosphate synthase 29 209 4.2E-55 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CJD35_RS13235 3ec942d738734e1fe9d183dfd83ad05c 238 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 28 212 1.6E-55 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CJD35_RS13235 3ec942d738734e1fe9d183dfd83ad05c 238 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 27 228 23.186 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CJD35_RS01270 e2d3e5b1c9d50934126ac48664cdfe89 174 SUPERFAMILY SSF74942 85 153 6.8E-14 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CJD35_RS01270 e2d3e5b1c9d50934126ac48664cdfe89 174 Gene3D G3DSA:2.30.30.180 89 151 7.2E-11 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CJD35_RS01270 e2d3e5b1c9d50934126ac48664cdfe89 174 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 153 21.482 T 28-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CJD35_RS01270 e2d3e5b1c9d50934126ac48664cdfe89 174 SUPERFAMILY SSF75420 5 84 5.36E-21 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CJD35_RS01270 e2d3e5b1c9d50934126ac48664cdfe89 174 Pfam PF17384 RimP C-terminal SH3 domain 87 152 5.7E-11 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CJD35_RS01270 e2d3e5b1c9d50934126ac48664cdfe89 174 Pfam PF02576 RimP N-terminal domain 10 84 7.8E-24 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CJD35_RS01270 e2d3e5b1c9d50934126ac48664cdfe89 174 Gene3D G3DSA:3.30.300.70 2 81 6.4E-21 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 SMART SM00878 337 443 3.1E-63 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 SUPERFAMILY SSF51246 332 445 4.55E-43 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 Gene3D G3DSA:3.40.50.20 2 124 7.7E-43 T 28-03-2018 CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 3.8E-37 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 Gene3D G3DSA:3.30.1490.20 125 209 1.2E-19 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 SUPERFAMILY SSF56059 84 349 1.14E-65 T 28-03-2018 CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 SUPERFAMILY SSF52440 2 114 1.73E-38 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 6.3E-69 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 Gene3D G3DSA:3.30.470.20 210 446 9.6E-98 T 28-03-2018 CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS06255 d6a51d980394f979cd455bc77f07eac6 455 Pfam PF02785 Biotin carboxylase C-terminal domain 337 444 3.8E-41 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS03105 702f76a5b76e22171555dbfbdb0ddff4 294 Pfam PF02154 Flagellar motor switch protein FliM 20 195 1.0E-21 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CJD35_RS03105 702f76a5b76e22171555dbfbdb0ddff4 294 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 221 289 4.8E-15 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CJD35_RS03105 702f76a5b76e22171555dbfbdb0ddff4 294 Gene3D G3DSA:2.30.330.10 207 294 5.8E-18 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CJD35_RS03105 702f76a5b76e22171555dbfbdb0ddff4 294 Gene3D G3DSA:3.40.1550.10 17 202 1.6E-18 T 28-03-2018 IPR028976 CheC-like domain CJD35_RS03105 702f76a5b76e22171555dbfbdb0ddff4 294 SUPERFAMILY SSF103039 25 178 2.17E-5 T 28-03-2018 IPR028976 CheC-like domain CJD35_RS03105 702f76a5b76e22171555dbfbdb0ddff4 294 SUPERFAMILY SSF101801 219 293 9.68E-12 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CJD35_RS21420 d74199d04a0e82ab47768722e25abf5b 55 Pfam PF02803 Thiolase, C-terminal domain 2 49 7.7E-16 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CJD35_RS21420 d74199d04a0e82ab47768722e25abf5b 55 ProSitePatterns PS00099 Thiolases active site. 31 44 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CJD35_RS21420 d74199d04a0e82ab47768722e25abf5b 55 Gene3D G3DSA:3.40.47.10 1 47 6.1E-12 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS21420 d74199d04a0e82ab47768722e25abf5b 55 SUPERFAMILY SSF53901 2 49 4.32E-15 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS18300 d74199d04a0e82ab47768722e25abf5b 55 Pfam PF02803 Thiolase, C-terminal domain 2 49 7.7E-16 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CJD35_RS18300 d74199d04a0e82ab47768722e25abf5b 55 ProSitePatterns PS00099 Thiolases active site. 31 44 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CJD35_RS18300 d74199d04a0e82ab47768722e25abf5b 55 Gene3D G3DSA:3.40.47.10 1 47 6.1E-12 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS18300 d74199d04a0e82ab47768722e25abf5b 55 SUPERFAMILY SSF53901 2 49 4.32E-15 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.0E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 1.0E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.0E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.0E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.0E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.0E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 1.0E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.0E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.0E-75 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 Gene3D G3DSA:3.30.70.1430 40 141 4.6E-26 T 28-03-2018 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 Gene3D G3DSA:3.30.2090.10 180 269 2.0E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 SUPERFAMILY SSF82693 41 134 4.19E-24 T 28-03-2018 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 Gene3D G3DSA:3.30.70.1430 556 656 1.1E-9 T 28-03-2018 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 SUPERFAMILY SSF82714 705 789 5.49E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 Pfam PF00873 AcrB/AcrD/AcrF family 4 1007 1.8E-289 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 SUPERFAMILY SSF82693 553 650 9.42E-13 T 28-03-2018 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 Gene3D G3DSA:1.20.1640.10 282 501 1.0E-43 T 28-03-2018 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 SUPERFAMILY SSF82693 135 181 7.06E-22 T 28-03-2018 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 SUPERFAMILY SSF82693 268 324 7.06E-22 T 28-03-2018 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 Gene3D G3DSA:3.30.2090.10 704 791 2.0E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 Gene3D G3DSA:1.20.1640.10 792 1012 5.8E-40 T 28-03-2018 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 SUPERFAMILY SSF82714 182 266 3.14E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 SUPERFAMILY SSF82866 789 1012 2.49E-43 T 28-03-2018 CJD35_RS10155 01ce796d782fd446c1914b19914b750a 1034 SUPERFAMILY SSF82866 290 490 1.96E-47 T 28-03-2018 CJD35_RS08545 c84d789b427bf43ac278258efaca94fc 102 PRINTS PR00971 Ribosomal protein S10 family signature 60 74 4.2E-17 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08545 c84d789b427bf43ac278258efaca94fc 102 PRINTS PR00971 Ribosomal protein S10 family signature 4 17 4.2E-17 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08545 c84d789b427bf43ac278258efaca94fc 102 PRINTS PR00971 Ribosomal protein S10 family signature 39 54 4.2E-17 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08545 c84d789b427bf43ac278258efaca94fc 102 SMART SM01403 6 100 1.9E-53 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CJD35_RS08545 c84d789b427bf43ac278258efaca94fc 102 Gene3D G3DSA:3.30.70.600 3 102 1.5E-34 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CJD35_RS08545 c84d789b427bf43ac278258efaca94fc 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 2 101 26.294 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08545 c84d789b427bf43ac278258efaca94fc 102 SUPERFAMILY SSF54999 5 101 5.23E-37 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CJD35_RS08545 c84d789b427bf43ac278258efaca94fc 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 28 43 - T 28-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08545 c84d789b427bf43ac278258efaca94fc 102 Pfam PF00338 Ribosomal protein S10p/S20e 6 100 2.4E-34 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CJD35_RS08545 c84d789b427bf43ac278258efaca94fc 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 100 7.4E-43 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS19565 8aad8ec15842ac0274c4e9aad061fac3 294 SUPERFAMILY SSF51735 5 166 1.07E-26 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS19565 8aad8ec15842ac0274c4e9aad061fac3 294 Gene3D G3DSA:3.40.50.720 5 174 2.2E-15 T 28-03-2018 CJD35_RS19565 8aad8ec15842ac0274c4e9aad061fac3 294 Pfam PF09130 Domain of unknown function (DUF1932) 195 260 4.1E-14 T 28-03-2018 IPR015814 Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal CJD35_RS19565 8aad8ec15842ac0274c4e9aad061fac3 294 SUPERFAMILY SSF48179 168 265 1.02E-26 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS19565 8aad8ec15842ac0274c4e9aad061fac3 294 PIRSF PIRSF000103 1 264 1.0E-26 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CJD35_RS19565 8aad8ec15842ac0274c4e9aad061fac3 294 Gene3D G3DSA:1.10.1040.10 177 285 1.2E-24 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS19565 8aad8ec15842ac0274c4e9aad061fac3 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 128 1.6E-5 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 Gene3D G3DSA:1.10.8.60 346 548 1.5E-47 T 28-03-2018 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 SMART SM01086 767 856 4.6E-36 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 Gene3D G3DSA:1.10.8.60 767 859 8.1E-23 T 28-03-2018 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 856 0.0 T 28-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 Gene3D G3DSA:3.40.50.300 553 766 9.1E-52 T 28-03-2018 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 647 665 5.4E-41 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 620 5.4E-41 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 676 694 5.4E-41 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 709 723 5.4E-41 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 Gene3D G3DSA:3.40.50.300 160 345 2.0E-25 T 28-03-2018 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 297 309 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 SUPERFAMILY SSF52540 547 851 9.99E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 206 337 1.4E-12 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 632 650 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 Pfam PF07724 AAA domain (Cdc48 subfamily) 597 761 1.4E-54 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 Gene3D G3DSA:1.10.1780.10 1 151 6.9E-31 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 SUPERFAMILY SSF81923 4 159 8.04E-37 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 768 847 9.3E-25 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 SUPERFAMILY SSF52540 162 544 1.63E-100 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 SMART SM00382 201 347 5.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 SMART SM00382 598 749 1.9E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 2.1E-10 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CJD35_RS04755 41bdee9bb92992f7c04f0d5c2aa22ad5 859 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 96 147 5.3E-10 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CJD35_RS14740 61578ecef51573af44cb5e493f9dd533 171 SUPERFAMILY SSF55021 10 85 1.25E-18 T 28-03-2018 CJD35_RS14740 61578ecef51573af44cb5e493f9dd533 171 Pfam PF10369 Small subunit of acetolactate synthase 94 167 1.0E-24 T 28-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CJD35_RS14740 61578ecef51573af44cb5e493f9dd533 171 Gene3D G3DSA:3.30.70.1150 98 170 8.1E-26 T 28-03-2018 CJD35_RS14740 61578ecef51573af44cb5e493f9dd533 171 Pfam PF13710 ACT domain 21 82 7.3E-12 T 28-03-2018 CJD35_RS14740 61578ecef51573af44cb5e493f9dd533 171 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 10 167 1.2E-52 T 28-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CJD35_RS14740 61578ecef51573af44cb5e493f9dd533 171 Gene3D G3DSA:3.30.70.260 1 97 6.0E-25 T 28-03-2018 CJD35_RS14740 61578ecef51573af44cb5e493f9dd533 171 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 10 85 1.0E-30 T 28-03-2018 CJD35_RS14740 61578ecef51573af44cb5e493f9dd533 171 SUPERFAMILY SSF55021 89 169 7.05E-26 T 28-03-2018 CJD35_RS07185 72fded8d02634835cdc000e7c1f5662c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS07185 72fded8d02634835cdc000e7c1f5662c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 7.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS07185 72fded8d02634835cdc000e7c1f5662c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 7.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS07185 72fded8d02634835cdc000e7c1f5662c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 7.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS07185 72fded8d02634835cdc000e7c1f5662c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 7.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS07185 72fded8d02634835cdc000e7c1f5662c 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 3.3E-88 T 28-03-2018 CJD35_RS07185 72fded8d02634835cdc000e7c1f5662c 268 PIRSF PIRSF000094 2 260 2.3E-112 T 28-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CJD35_RS07185 72fded8d02634835cdc000e7c1f5662c 268 Gene3D G3DSA:3.40.50.720 16 263 2.0E-42 T 28-03-2018 CJD35_RS07185 72fded8d02634835cdc000e7c1f5662c 268 SUPERFAMILY SSF51735 7 254 5.29E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS21245 4d25c437545cd695efd5b6b382eaf720 975 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 117 1.6E-10 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS21245 4d25c437545cd695efd5b6b382eaf720 975 Pfam PF00361 Proton-conducting membrane transporter 130 410 1.4E-63 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS21245 4d25c437545cd695efd5b6b382eaf720 975 Pfam PF13244 Domain of unknown function (DUF4040) 619 681 1.3E-17 T 28-03-2018 IPR025383 Domain of unknown function DUF4040 CJD35_RS21245 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 7.4E-41 T 28-03-2018 CJD35_RS21245 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 7.4E-41 T 28-03-2018 CJD35_RS21245 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 7.4E-41 T 28-03-2018 CJD35_RS21245 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 419 438 7.4E-41 T 28-03-2018 CJD35_RS21245 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 7.4E-41 T 28-03-2018 CJD35_RS21245 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 7.4E-41 T 28-03-2018 CJD35_RS21245 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 7.4E-41 T 28-03-2018 CJD35_RS21245 4d25c437545cd695efd5b6b382eaf720 975 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 821 943 2.1E-31 T 28-03-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CJD35_RS18125 4d25c437545cd695efd5b6b382eaf720 975 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 117 1.6E-10 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS18125 4d25c437545cd695efd5b6b382eaf720 975 Pfam PF00361 Proton-conducting membrane transporter 130 410 1.4E-63 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS18125 4d25c437545cd695efd5b6b382eaf720 975 Pfam PF13244 Domain of unknown function (DUF4040) 619 681 1.3E-17 T 28-03-2018 IPR025383 Domain of unknown function DUF4040 CJD35_RS18125 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 7.4E-41 T 28-03-2018 CJD35_RS18125 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 7.4E-41 T 28-03-2018 CJD35_RS18125 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 242 268 7.4E-41 T 28-03-2018 CJD35_RS18125 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 419 438 7.4E-41 T 28-03-2018 CJD35_RS18125 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 7.4E-41 T 28-03-2018 CJD35_RS18125 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 220 241 7.4E-41 T 28-03-2018 CJD35_RS18125 4d25c437545cd695efd5b6b382eaf720 975 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 310 322 7.4E-41 T 28-03-2018 CJD35_RS18125 4d25c437545cd695efd5b6b382eaf720 975 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 821 943 2.1E-31 T 28-03-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 SUPERFAMILY SSF81891 390 635 1.06E-20 T 28-03-2018 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 SUPERFAMILY SSF81301 42 203 2.01E-33 T 28-03-2018 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 Gene3D G3DSA:3.30.70.260 829 915 3.3E-10 T 28-03-2018 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 Pfam PF08335 GlnD PII-uridylyltransferase 213 351 3.5E-33 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 SUPERFAMILY SSF81593 233 313 5.1E-9 T 28-03-2018 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 SMART SM00471 488 635 1.3E-7 T 28-03-2018 IPR003607 HD/PDEase domain CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 Gene3D G3DSA:3.30.70.260 723 813 7.7E-12 T 28-03-2018 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 Pfam PF01966 HD domain 494 605 2.7E-11 T 28-03-2018 IPR006674 HD domain CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 PIRSF PIRSF006288 30 916 0.0 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 Gene3D G3DSA:1.10.3090.10 386 712 4.7E-47 T 28-03-2018 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 920 286.569 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 58 907 1.6E-283 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 Gene3D G3DSA:3.30.460.10 39 207 2.2E-22 T 28-03-2018 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 Gene3D G3DSA:1.20.120.330 210 356 1.2E-22 T 28-03-2018 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 SUPERFAMILY SSF55021 725 796 2.25E-11 T 28-03-2018 CJD35_RS05945 1b3f8b0b60de05faf3d4901759a83402 920 SUPERFAMILY SSF55021 836 905 5.41E-9 T 28-03-2018 CJD35_RS15295 4f7b5b6af56ee8ce3d0cf970addb1a05 112 SUPERFAMILY SSF53098 1 87 8.04E-20 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS15295 4f7b5b6af56ee8ce3d0cf970addb1a05 112 Gene3D G3DSA:3.30.420.10 1 96 8.1E-17 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS15295 4f7b5b6af56ee8ce3d0cf970addb1a05 112 Pfam PF13683 Integrase core domain 17 82 3.1E-27 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS06130 46b4219f46acb2b9d469b6dc2fe5dc62 209 Pfam PF01467 Cytidylyltransferase-like 6 155 3.8E-16 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CJD35_RS06130 46b4219f46acb2b9d469b6dc2fe5dc62 209 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 184 20.157 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CJD35_RS06130 46b4219f46acb2b9d469b6dc2fe5dc62 209 Gene3D G3DSA:3.40.50.620 1 195 1.3E-34 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS06130 46b4219f46acb2b9d469b6dc2fe5dc62 209 SUPERFAMILY SSF52374 1 185 2.06E-34 T 28-03-2018 CJD35_RS11280 a9bb3aee7a5aace3c5cc02dd62489bee 112 Pfam PF04342 Putative member of DMT superfamily (DUF486) 3 108 5.8E-42 T 28-03-2018 IPR007437 Putative member of DMT superfamily CJD35_RS11280 a9bb3aee7a5aace3c5cc02dd62489bee 112 PIRSF PIRSF021239 1 111 8.4E-43 T 28-03-2018 IPR007437 Putative member of DMT superfamily CJD35_RS01840 0c56ce7d84e76b9f71aee7ffba0b0c68 359 Gene3D G3DSA:1.10.443.10 173 331 9.3E-19 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS01840 0c56ce7d84e76b9f71aee7ffba0b0c68 359 Pfam PF00589 Phage integrase family 183 322 1.5E-12 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS01840 0c56ce7d84e76b9f71aee7ffba0b0c68 359 Gene3D G3DSA:1.10.150.130 54 172 2.9E-11 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS01840 0c56ce7d84e76b9f71aee7ffba0b0c68 359 SUPERFAMILY SSF56349 65 328 6.04E-44 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 55 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 SUPERFAMILY SSF52374 2 193 3.9E-131 T 28-03-2018 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 SUPERFAMILY SSF52374 375 612 3.9E-131 T 28-03-2018 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 TIGRFAM TIGR00422 valS: valine--tRNA ligase 5 885 4.5E-293 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 PRINTS PR00986 Valyl-tRNA synthetase signature 37 48 7.2E-34 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 PRINTS PR00986 Valyl-tRNA synthetase signature 477 498 7.2E-34 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 PRINTS PR00986 Valyl-tRNA synthetase signature 380 393 7.2E-34 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 PRINTS PR00986 Valyl-tRNA synthetase signature 514 532 7.2E-34 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 PRINTS PR00986 Valyl-tRNA synthetase signature 237 254 7.2E-34 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 Gene3D G3DSA:3.40.50.620 27 555 2.2E-110 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 602 1.4E-182 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 Gene3D G3DSA:1.10.730.10 556 775 4.4E-66 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 Gene3D G3DSA:1.10.287.380 833 903 1.6E-19 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 Hamap MF_02004 Valine--tRNA ligase [valS]. 4 905 15.008 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 Pfam PF08264 Anticodon-binding domain of tRNA 644 781 5.9E-36 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 840 905 4.0E-13 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 SUPERFAMILY SSF46589 840 904 2.25E-12 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 SUPERFAMILY SSF47323 615 853 1.08E-49 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS09615 8e658213801a068fc5e63b52bd5d686b 905 SUPERFAMILY SSF50677 192 353 1.83E-43 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CJD35_RS04490 54caa87f9e77b9a8020b148cb2ae44bc 384 Gene3D G3DSA:3.40.50.2000 19 199 5.1E-14 T 28-03-2018 CJD35_RS04490 54caa87f9e77b9a8020b148cb2ae44bc 384 Gene3D G3DSA:3.40.50.2000 200 366 9.2E-34 T 28-03-2018 CJD35_RS04490 54caa87f9e77b9a8020b148cb2ae44bc 384 SUPERFAMILY SSF53756 25 382 9.11E-57 T 28-03-2018 CJD35_RS04490 54caa87f9e77b9a8020b148cb2ae44bc 384 Pfam PF13439 Glycosyltransferase Family 4 35 189 5.0E-8 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS04490 54caa87f9e77b9a8020b148cb2ae44bc 384 Pfam PF00534 Glycosyl transferases group 1 207 350 2.2E-23 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS17130 6c3ee46abae70cb4a03dc565482a9085 437 SUPERFAMILY SSF118215 19 412 8.5E-113 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS17130 6c3ee46abae70cb4a03dc565482a9085 437 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 4.6E-23 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS17130 6c3ee46abae70cb4a03dc565482a9085 437 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 4.6E-23 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS17130 6c3ee46abae70cb4a03dc565482a9085 437 PRINTS PR00173 Glutamate-aspartate symporter signature 337 356 4.6E-23 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS17130 6c3ee46abae70cb4a03dc565482a9085 437 PRINTS PR00173 Glutamate-aspartate symporter signature 84 109 4.6E-23 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS17130 6c3ee46abae70cb4a03dc565482a9085 437 PRINTS PR00173 Glutamate-aspartate symporter signature 302 328 4.6E-23 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS17130 6c3ee46abae70cb4a03dc565482a9085 437 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 12 437 37.089 T 28-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 CJD35_RS17130 6c3ee46abae70cb4a03dc565482a9085 437 Gene3D G3DSA:1.10.3860.10 10 418 4.3E-108 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS17130 6c3ee46abae70cb4a03dc565482a9085 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 305 328 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CJD35_RS17130 6c3ee46abae70cb4a03dc565482a9085 437 Pfam PF00375 Sodium:dicarboxylate symporter family 19 409 2.1E-101 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS17130 6c3ee46abae70cb4a03dc565482a9085 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 46 61 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CJD35_RS10030 a17be8d91fd584cdbe5b71673020d354 367 Gene3D G3DSA:1.10.150.130 65 176 1.3E-9 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS10030 a17be8d91fd584cdbe5b71673020d354 367 SUPERFAMILY SSF56349 70 335 4.71E-42 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS10030 a17be8d91fd584cdbe5b71673020d354 367 Gene3D G3DSA:1.10.443.10 178 349 1.3E-21 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS10030 a17be8d91fd584cdbe5b71673020d354 367 Pfam PF00589 Phage integrase family 195 335 2.2E-12 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS07920 fb575e7014da1104d86d04e27f3104b2 631 Gene3D G3DSA:3.30.1120.10 323 433 2.5E-15 T 28-03-2018 CJD35_RS07920 fb575e7014da1104d86d04e27f3104b2 631 Pfam PF00884 Sulfatase 158 305 4.1E-19 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CJD35_RS07920 fb575e7014da1104d86d04e27f3104b2 631 Pfam PF00884 Sulfatase 35 126 8.4E-18 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CJD35_RS07920 fb575e7014da1104d86d04e27f3104b2 631 Gene3D G3DSA:1.25.10.10 434 605 7.0E-8 T 28-03-2018 IPR011989 Armadillo-like helical CJD35_RS07920 fb575e7014da1104d86d04e27f3104b2 631 SUPERFAMILY SSF53649 33 358 3.93E-77 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJD35_RS07920 fb575e7014da1104d86d04e27f3104b2 631 SUPERFAMILY SSF53649 396 440 3.93E-77 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJD35_RS07920 fb575e7014da1104d86d04e27f3104b2 631 ProSitePatterns PS00523 Sulfatases signature 1. 80 92 - T 28-03-2018 IPR024607 Sulfatase, conserved site CJD35_RS07920 fb575e7014da1104d86d04e27f3104b2 631 Gene3D G3DSA:3.40.720.10 32 141 2.7E-24 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJD35_RS07920 fb575e7014da1104d86d04e27f3104b2 631 Pfam PF13646 HEAT repeats 519 582 2.9E-8 T 28-03-2018 CJD35_RS07920 fb575e7014da1104d86d04e27f3104b2 631 SUPERFAMILY SSF48371 478 601 5.38E-11 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 CJD35_RS07920 fb575e7014da1104d86d04e27f3104b2 631 Gene3D G3DSA:3.40.720.10 142 318 1.9E-24 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJD35_RS17315 9fdec8b36cecdf1839751d0ccdbcf83d 145 Pfam PF04143 Sulphur transport 14 131 2.1E-6 T 28-03-2018 IPR007272 Sulphur transport domain CJD35_RS14940 7f7c52e99914776e7c2a531bdf5080d5 397 Gene3D G3DSA:1.10.10.10 8 77 9.6E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17600 bf0e8914b54ec51560646aa451feed65 478 Gene3D G3DSA:3.40.605.10 1 260 1.0E-76 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS17600 bf0e8914b54ec51560646aa451feed65 478 Gene3D G3DSA:3.40.309.10 261 455 9.7E-64 T 28-03-2018 CJD35_RS17600 bf0e8914b54ec51560646aa451feed65 478 SUPERFAMILY SSF53720 3 470 6.28E-148 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS17600 bf0e8914b54ec51560646aa451feed65 478 Pfam PF00171 Aldehyde dehydrogenase family 13 469 5.8E-145 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS17600 bf0e8914b54ec51560646aa451feed65 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS21970 70896d4af13f27624dcd15c9ae45ce5f 286 Gene3D G3DSA:1.10.10.10 45 180 1.7E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21970 70896d4af13f27624dcd15c9ae45ce5f 286 Pfam PF10134 Replication initiator protein A 24 251 2.7E-55 T 28-03-2018 IPR018777 Replication initiator protein A CJD35_RS00240 09b8029d55e7b91fad0e800f101c8224 291 Gene3D G3DSA:3.60.21.10 32 278 5.7E-26 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS00240 09b8029d55e7b91fad0e800f101c8224 291 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 37 249 8.8E-11 T 28-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CJD35_RS00240 09b8029d55e7b91fad0e800f101c8224 291 SUPERFAMILY SSF56300 31 264 2.37E-31 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS13795 c59126a49ffab28039b40582dbf1498e 315 Pfam PF14226 non-haem dioxygenase in morphine synthesis N-terminal 9 124 2.9E-24 T 28-03-2018 IPR026992 Non-haem dioxygenase N-terminal domain CJD35_RS13795 c59126a49ffab28039b40582dbf1498e 315 Pfam PF03171 2OG-Fe(II) oxygenase superfamily 170 271 9.2E-18 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CJD35_RS13795 c59126a49ffab28039b40582dbf1498e 315 Gene3D G3DSA:2.60.120.330 4 312 1.4E-88 T 28-03-2018 IPR027443 Isopenicillin N synthase-like CJD35_RS13795 c59126a49ffab28039b40582dbf1498e 315 SUPERFAMILY SSF51197 7 308 4.12E-82 T 28-03-2018 CJD35_RS04635 ea860d3a038ec98faf80317a64c98668 441 Pfam PF03129 Anticodon binding domain 332 417 1.8E-11 T 28-03-2018 IPR004154 Anticodon-binding CJD35_RS04635 ea860d3a038ec98faf80317a64c98668 441 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 9 409 1.5E-140 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CJD35_RS04635 ea860d3a038ec98faf80317a64c98668 441 Gene3D G3DSA:3.40.50.800 326 422 2.3E-18 T 28-03-2018 IPR004154 Anticodon-binding CJD35_RS04635 ea860d3a038ec98faf80317a64c98668 441 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 5 419 29.36 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CJD35_RS04635 ea860d3a038ec98faf80317a64c98668 441 SUPERFAMILY SSF52954 329 418 3.32E-20 T 28-03-2018 IPR004154 Anticodon-binding CJD35_RS04635 ea860d3a038ec98faf80317a64c98668 441 PIRSF PIRSF001549 3 421 1.9E-104 T 28-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CJD35_RS04635 ea860d3a038ec98faf80317a64c98668 441 Gene3D G3DSA:3.30.930.10 2 325 2.9E-65 T 28-03-2018 CJD35_RS04635 ea860d3a038ec98faf80317a64c98668 441 SUPERFAMILY SSF55681 8 322 1.91E-85 T 28-03-2018 CJD35_RS04635 ea860d3a038ec98faf80317a64c98668 441 Pfam PF13393 Histidyl-tRNA synthetase 23 318 5.6E-31 T 28-03-2018 CJD35_RS03250 6d4ea26b9e56a5d901f56a11bae8b44d 103 Pfam PF10135 Rod binding protein 42 87 1.1E-9 T 28-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal CJD35_RS03250 6d4ea26b9e56a5d901f56a11bae8b44d 103 PRINTS PR01002 Flagellar protein FlgJ signature 43 63 2.5E-7 T 28-03-2018 CJD35_RS03250 6d4ea26b9e56a5d901f56a11bae8b44d 103 PRINTS PR01002 Flagellar protein FlgJ signature 64 86 2.5E-7 T 28-03-2018 CJD35_RS03250 6d4ea26b9e56a5d901f56a11bae8b44d 103 PRINTS PR01002 Flagellar protein FlgJ signature 18 41 2.5E-7 T 28-03-2018 CJD35_RS12505 7c6b90db490a4762b99a2fb78e4558d6 139 SUPERFAMILY SSF143744 2 136 7.59E-43 T 28-03-2018 CJD35_RS12505 7c6b90db490a4762b99a2fb78e4558d6 139 Pfam PF03928 Haem-degrading 7 133 3.0E-34 T 28-03-2018 IPR005624 Haem-degrading CJD35_RS18465 511851f9b27b43117a61b06498a08ef1 118 SUPERFAMILY SSF52172 4 116 4.7E-18 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS18465 511851f9b27b43117a61b06498a08ef1 118 Gene3D G3DSA:3.40.50.2300 1 117 1.4E-15 T 28-03-2018 CJD35_RS18465 511851f9b27b43117a61b06498a08ef1 118 SMART SM00448 5 112 5.7E-8 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18465 511851f9b27b43117a61b06498a08ef1 118 Pfam PF00072 Response regulator receiver domain 7 85 2.7E-9 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS19885 83d97f78c2c5dc2b39b1298e83cc78e3 420 Gene3D G3DSA:3.30.559.10 177 420 2.4E-85 T 28-03-2018 CJD35_RS19885 83d97f78c2c5dc2b39b1298e83cc78e3 420 Gene3D G3DSA:4.10.320.10 125 174 1.1E-14 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS19885 83d97f78c2c5dc2b39b1298e83cc78e3 420 Gene3D G3DSA:2.40.50.100 2 81 1.2E-18 T 28-03-2018 CJD35_RS19885 83d97f78c2c5dc2b39b1298e83cc78e3 420 Pfam PF02817 e3 binding domain 128 162 2.6E-13 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS19885 83d97f78c2c5dc2b39b1298e83cc78e3 420 SUPERFAMILY SSF52777 194 419 1.29E-76 T 28-03-2018 CJD35_RS19885 83d97f78c2c5dc2b39b1298e83cc78e3 420 SUPERFAMILY SSF51230 1 90 4.06E-28 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS19885 83d97f78c2c5dc2b39b1298e83cc78e3 420 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CJD35_RS19885 83d97f78c2c5dc2b39b1298e83cc78e3 420 SUPERFAMILY SSF47005 125 165 9.55E-10 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS19885 83d97f78c2c5dc2b39b1298e83cc78e3 420 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 194 419 1.0E-75 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS19885 83d97f78c2c5dc2b39b1298e83cc78e3 420 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 5 419 1.1E-150 T 28-03-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 CJD35_RS19885 83d97f78c2c5dc2b39b1298e83cc78e3 420 Pfam PF00364 Biotin-requiring enzyme 4 77 2.7E-21 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Pfam PF10385 RNA polymerase beta subunit external 1 domain 603 668 1.6E-24 T 28-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Pfam PF04560 RNA polymerase Rpb2, domain 7 1296 1369 1.5E-26 T 28-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Pfam PF00562 RNA polymerase Rpb2, domain 6 730 1294 3.2E-165 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Gene3D G3DSA:3.90.1110.10 158 441 1.8E-70 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Gene3D G3DSA:2.40.50.150 840 1068 8.7E-54 T 28-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Gene3D G3DSA:3.90.1100.10 656 725 4.2E-14 T 28-03-2018 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Gene3D G3DSA:3.90.1100.10 442 655 2.3E-80 T 28-03-2018 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Pfam PF04565 RNA polymerase Rpb2, domain 3 525 593 1.3E-31 T 28-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Gene3D G3DSA:3.90.1800.10 1297 1340 2.3E-11 T 28-03-2018 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1087 1099 - T 28-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 SUPERFAMILY SSF64484 18 236 0.0 T 28-03-2018 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 SUPERFAMILY SSF64484 1063 1370 0.0 T 28-03-2018 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 SUPERFAMILY SSF64484 355 950 0.0 T 28-03-2018 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 19 1372 12.429 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 14 1369 0.0 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Gene3D G3DSA:2.40.270.10 1069 1272 5.1E-76 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Pfam PF04561 RNA polymerase Rpb2, domain 2 360 466 3.7E-19 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Pfam PF04561 RNA polymerase Rpb2, domain 2 161 233 2.7E-6 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Pfam PF04563 RNA polymerase beta subunit 33 509 2.4E-34 T 28-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01820 ffe54e70232f0d1cb0e27eed44882743 1387 Gene3D G3DSA:2.40.50.100 726 806 3.7E-28 T 28-03-2018 CJD35_RS07320 d1f72091ecac345f9d56717a513aec4c 75 Gene3D G3DSA:2.60.260.40 1 53 1.4E-22 T 28-03-2018 CJD35_RS07320 d1f72091ecac345f9d56717a513aec4c 75 Pfam PF10276 Zinc-finger domain 13 51 1.6E-19 T 28-03-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS04770 5b513a631f514b04876eb8adff583a74 344 Gene3D G3DSA:3.40.50.300 70 317 4.9E-7 T 28-03-2018 CJD35_RS04770 5b513a631f514b04876eb8adff583a74 344 SUPERFAMILY SSF52540 65 297 1.33E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05295 b1ec2f167b81d1ea0bbcb6ba60f0a6e8 248 TIGRFAM TIGR02780 TrbJ_Ti: P-type conjugative transfer protein TrbJ 21 248 8.8E-50 T 28-03-2018 IPR014147 Type IV conjugative transfer protein TrbJ CJD35_RS05295 b1ec2f167b81d1ea0bbcb6ba60f0a6e8 248 Gene3D G3DSA:1.20.58.430 37 230 3.8E-29 T 28-03-2018 CJD35_RS13215 941fe80767a0af0fe4af9fe729db3f34 184 SUPERFAMILY SSF48452 65 155 3.32E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS13215 941fe80767a0af0fe4af9fe729db3f34 184 Pfam PF14559 Tetratricopeptide repeat 105 161 2.9E-7 T 28-03-2018 CJD35_RS13215 941fe80767a0af0fe4af9fe729db3f34 184 Gene3D G3DSA:1.25.40.10 57 184 1.1E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS10505 06803e8ed78eb64d0f92d5abee2b2df6 452 PIRSF PIRSF006815 1 451 9.2E-164 T 28-03-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 CJD35_RS10505 06803e8ed78eb64d0f92d5abee2b2df6 452 Pfam PF02347 Glycine cleavage system P-protein 1 446 2.4E-118 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CJD35_RS10505 06803e8ed78eb64d0f92d5abee2b2df6 452 Gene3D G3DSA:3.40.640.10 83 337 1.6E-38 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS10505 06803e8ed78eb64d0f92d5abee2b2df6 452 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 450 44.245 T 28-03-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 CJD35_RS10505 06803e8ed78eb64d0f92d5abee2b2df6 452 SUPERFAMILY SSF53383 1 449 2.78E-113 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS10505 06803e8ed78eb64d0f92d5abee2b2df6 452 Gene3D G3DSA:3.90.1150.10 338 452 3.5E-28 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 Gene3D G3DSA:1.10.268.10 377 521 4.8E-38 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 584 606 2.8 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 636 673 7.4 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 684 721 0.017 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 7 775 32.075 T 28-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 Gene3D G3DSA:3.90.199.10 37 318 8.9E-103 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 15 775 6.2E-241 T 28-03-2018 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 Gene3D G3DSA:2.120.10.90 532 735 2.9E-36 T 28-03-2018 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 SUPERFAMILY SSF56719 34 511 5.62E-144 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 SMART SM00434 14 494 2.8E-200 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 35 491 1.3E-128 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13830 3407388cbc003b9547ba1b3f3129886c 775 SUPERFAMILY SSF101904 535 774 1.07E-48 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CJD35_RS19875 900b635e42e19cba07ef7bf763f1922d 389 SUPERFAMILY SSF47823 52 148 1.77E-24 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CJD35_RS19875 900b635e42e19cba07ef7bf763f1922d 389 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 56 121 5.4E-6 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS19875 900b635e42e19cba07ef7bf763f1922d 389 Gene3D G3DSA:1.10.443.10 144 374 2.2E-20 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19875 900b635e42e19cba07ef7bf763f1922d 389 SUPERFAMILY SSF56349 172 372 1.59E-27 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS19875 900b635e42e19cba07ef7bf763f1922d 389 Pfam PF00589 Phage integrase family 173 372 4.6E-8 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19875 900b635e42e19cba07ef7bf763f1922d 389 Gene3D G3DSA:1.10.150.130 50 143 1.8E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS17885 7d382d136731311366e0a8c259ff9244 343 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 69 315 2.5E-42 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CJD35_RS17885 7d382d136731311366e0a8c259ff9244 343 Gene3D G3DSA:3.40.50.300 100 259 7.0E-22 T 28-03-2018 CJD35_RS17885 7d382d136731311366e0a8c259ff9244 343 Gene3D G3DSA:1.10.40.50 262 328 3.3E-17 T 28-03-2018 CJD35_RS17885 7d382d136731311366e0a8c259ff9244 343 SUPERFAMILY SSF52540 102 318 1.32E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS17885 7d382d136731311366e0a8c259ff9244 343 Pfam PF03193 RsgA GTPase 85 259 3.5E-46 T 28-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CJD35_RS17885 7d382d136731311366e0a8c259ff9244 343 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 30 323 28.98 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 SUPERFAMILY SSF46785 84 192 2.85E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 89 145 7.5E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 2.6E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 Gene3D G3DSA:3.40.190.10 164 264 3.8E-18 T 28-03-2018 CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 SUPERFAMILY SSF53850 172 380 7.47E-35 T 28-03-2018 CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 Pfam PF03466 LysR substrate binding domain 171 377 4.3E-32 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 Gene3D G3DSA:1.10.10.10 1 82 4.9E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 Gene3D G3DSA:1.10.10.10 83 163 2.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 SUPERFAMILY SSF46785 5 81 4.28E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16810 b97c878450538c24c4c0f32865c1e206 383 Gene3D G3DSA:3.40.190.10 265 342 3.8E-11 T 28-03-2018 CJD35_RS09900 295f2332e3ce3e025a1ccb98898578f8 391 Pfam PF12536 Patatin phospholipase 267 367 5.8E-31 T 28-03-2018 IPR021095 Protein of unknown function DUF3734 CJD35_RS09900 295f2332e3ce3e025a1ccb98898578f8 391 SUPERFAMILY SSF52151 21 95 1.45E-51 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CJD35_RS09900 295f2332e3ce3e025a1ccb98898578f8 391 SUPERFAMILY SSF52151 133 359 1.45E-51 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CJD35_RS09900 295f2332e3ce3e025a1ccb98898578f8 391 Pfam PF01734 Patatin-like phospholipase 23 229 1.6E-20 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CJD35_RS09900 295f2332e3ce3e025a1ccb98898578f8 391 Gene3D G3DSA:3.40.1090.10 9 315 7.5E-38 T 28-03-2018 CJD35_RS08015 f6e2bea99af91590e151978931e9f079 138 Gene3D G3DSA:3.30.1330.40 10 137 4.2E-37 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJD35_RS08015 f6e2bea99af91590e151978931e9f079 138 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 16 135 1.1E-31 T 28-03-2018 IPR006056 RidA family CJD35_RS08015 f6e2bea99af91590e151978931e9f079 138 SUPERFAMILY SSF55298 16 136 2.98E-38 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJD35_RS08015 f6e2bea99af91590e151978931e9f079 138 Pfam PF01042 Endoribonuclease L-PSP 19 135 2.2E-30 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CJD35_RS16190 0d75297c2300fd59c599bbd574142bc1 306 Pfam PF01909 Nucleotidyltransferase domain 41 91 1.3E-4 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CJD35_RS16190 0d75297c2300fd59c599bbd574142bc1 306 Pfam PF05168 HEPN domain 174 269 2.5E-5 T 28-03-2018 IPR007842 HEPN domain CJD35_RS16190 0d75297c2300fd59c599bbd574142bc1 306 Gene3D G3DSA:3.30.460.10 3 166 4.9E-23 T 28-03-2018 CJD35_RS16190 0d75297c2300fd59c599bbd574142bc1 306 SUPERFAMILY SSF81593 171 268 1.61E-7 T 28-03-2018 CJD35_RS16190 0d75297c2300fd59c599bbd574142bc1 306 SMART SM00748 172 282 5.1E-13 T 28-03-2018 IPR007842 HEPN domain CJD35_RS16190 0d75297c2300fd59c599bbd574142bc1 306 Gene3D G3DSA:1.20.120.330 167 297 7.4E-27 T 28-03-2018 CJD35_RS16190 0d75297c2300fd59c599bbd574142bc1 306 SUPERFAMILY SSF81301 15 115 1.21E-9 T 28-03-2018 CJD35_RS04345 ea0938c39e2834935918ebe8d988b8bf 335 SUPERFAMILY SSF52540 46 292 9.49E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04345 ea0938c39e2834935918ebe8d988b8bf 335 Pfam PF07728 AAA domain (dynein-related subfamily) 75 197 2.0E-11 T 28-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CJD35_RS04345 ea0938c39e2834935918ebe8d988b8bf 335 Gene3D G3DSA:3.40.50.300 66 265 1.2E-14 T 28-03-2018 CJD35_RS04345 ea0938c39e2834935918ebe8d988b8bf 335 Pfam PF12556 Cobaltochelatase CobS subunit N terminal 18 48 2.8E-14 T 28-03-2018 IPR025865 Cobaltochelatase subunit CobS N-terminal domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 CJD35_RS04345 ea0938c39e2834935918ebe8d988b8bf 335 TIGRFAM TIGR01650 PD_CobS: cobaltochelatase, CobS subunit 16 330 2.6E-177 T 28-03-2018 IPR006537 Cobaltochelatase subunit CobS KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 Gene3D G3DSA:1.20.200.10 97 352 5.7E-71 T 28-03-2018 CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 Gene3D G3DSA:1.10.275.10 1 94 2.0E-20 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 PRINTS PR00149 Fumarate lyase superfamily signature 265 281 1.7E-23 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 PRINTS PR00149 Fumarate lyase superfamily signature 137 155 1.7E-23 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 PRINTS PR00149 Fumarate lyase superfamily signature 92 110 1.7E-23 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 PRINTS PR00149 Fumarate lyase superfamily signature 220 247 1.7E-23 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 435 2.2E-144 T 28-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 Gene3D G3DSA:1.10.40.30 353 434 7.0E-25 T 28-03-2018 CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 PRINTS PR00145 Argininosuccinate lyase family signature 265 281 8.1E-5 T 28-03-2018 CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 PRINTS PR00145 Argininosuccinate lyase family signature 132 152 8.1E-5 T 28-03-2018 CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 PRINTS PR00145 Argininosuccinate lyase family signature 220 244 8.1E-5 T 28-03-2018 CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 Pfam PF10397 Adenylosuccinate lyase C-terminus 354 434 1.8E-24 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 ProSitePatterns PS00163 Fumarate lyases signature. 265 274 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 Pfam PF00206 Lyase 54 288 1.9E-47 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 SMART SM00998 353 435 6.2E-35 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS00050 a773ce2574268cd49154fc160161222b 438 SUPERFAMILY SSF48557 3 435 1.57E-123 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CJD35_RS14535 fb7fece7738b5bce03a5c11178a210dc 107 Gene3D G3DSA:3.30.1310.10 1 107 2.6E-36 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJD35_RS14535 fb7fece7738b5bce03a5c11178a210dc 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 103 5.5E-23 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJD35_RS14535 fb7fece7738b5bce03a5c11178a210dc 107 PIRSF PIRSF004555 1 107 5.8E-33 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJD35_RS14535 fb7fece7738b5bce03a5c11178a210dc 107 Pfam PF02575 YbaB/EbfC DNA-binding family 10 97 5.1E-29 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJD35_RS14535 fb7fece7738b5bce03a5c11178a210dc 107 SUPERFAMILY SSF82607 10 101 1.19E-27 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJD35_RS14535 fb7fece7738b5bce03a5c11178a210dc 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 2 96 19.28 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CJD35_RS07425 1967ea4b33cdba2f4ad0896b23a64be5 435 Pfam PF07690 Major Facilitator Superfamily 31 378 5.1E-23 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS07425 1967ea4b33cdba2f4ad0896b23a64be5 435 Gene3D G3DSA:1.20.1250.20 19 238 7.3E-28 T 28-03-2018 CJD35_RS07425 1967ea4b33cdba2f4ad0896b23a64be5 435 TIGRFAM TIGR01272 gluP: glucose/galactose transporter WARNING 108 417 5.4E-92 T 28-03-2018 IPR005964 Bacterial glucose/galactose transporter GO:0005354|GO:0005355|GO:0009276|GO:0015757|GO:0015758|GO:0016021 CJD35_RS07425 1967ea4b33cdba2f4ad0896b23a64be5 435 Gene3D G3DSA:1.20.1250.20 239 427 2.7E-18 T 28-03-2018 CJD35_RS07425 1967ea4b33cdba2f4ad0896b23a64be5 435 SUPERFAMILY SSF103473 20 426 6.54E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS15370 2ee8cf731423d684c5567c75495ff286 177 Gene3D G3DSA:3.10.180.10 6 161 1.7E-11 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS15370 2ee8cf731423d684c5567c75495ff286 177 SUPERFAMILY SSF54593 10 143 7.47E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS15370 2ee8cf731423d684c5567c75495ff286 177 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 128 6.0E-15 T 28-03-2018 CJD35_RS17090 ef4563d52937001fcc2ee43cc16a23f3 942 Gene3D G3DSA:2.40.170.20 197 942 9.3E-74 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17090 ef4563d52937001fcc2ee43cc16a23f3 942 Gene3D G3DSA:2.170.130.10 52 190 1.0E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17090 ef4563d52937001fcc2ee43cc16a23f3 942 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 925 942 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CJD35_RS17090 ef4563d52937001fcc2ee43cc16a23f3 942 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 185 1.9E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17090 ef4563d52937001fcc2ee43cc16a23f3 942 Pfam PF00593 TonB dependent receptor 470 941 4.8E-43 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17090 ef4563d52937001fcc2ee43cc16a23f3 942 SUPERFAMILY SSF56935 526 942 5.49E-89 T 28-03-2018 CJD35_RS17090 ef4563d52937001fcc2ee43cc16a23f3 942 SUPERFAMILY SSF56935 421 481 5.49E-89 T 28-03-2018 CJD35_RS17090 ef4563d52937001fcc2ee43cc16a23f3 942 SUPERFAMILY SSF56935 61 252 5.49E-89 T 28-03-2018 CJD35_RS17090 ef4563d52937001fcc2ee43cc16a23f3 942 SUPERFAMILY SSF56935 339 387 5.49E-89 T 28-03-2018 CJD35_RS21090 beddb0613bb34d72db6bee849ab703a4 232 ProSitePatterns PS00397 Site-specific recombinases active site. 19 27 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS21090 beddb0613bb34d72db6bee849ab703a4 232 Pfam PF02796 Helix-turn-helix domain of resolvase 171 212 2.9E-7 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21090 beddb0613bb34d72db6bee849ab703a4 232 SUPERFAMILY SSF53041 18 168 5.49E-26 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21090 beddb0613bb34d72db6bee849ab703a4 232 ProSitePatterns PS00398 Site-specific recombinases signature 2. 74 86 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS21090 beddb0613bb34d72db6bee849ab703a4 232 Pfam PF00239 Resolvase, N terminal domain 18 168 9.5E-24 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21090 beddb0613bb34d72db6bee849ab703a4 232 Gene3D G3DSA:3.40.50.1390 14 177 7.9E-34 T 28-03-2018 CJD35_RS21090 beddb0613bb34d72db6bee849ab703a4 232 SMART SM00857 16 169 3.4E-26 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS21090 beddb0613bb34d72db6bee849ab703a4 232 Gene3D G3DSA:1.10.10.60 178 232 4.1E-6 T 28-03-2018 CJD35_RS02920 560c330a22007e28ed47ab60706cf504 109 Gene3D G3DSA:3.30.10.10 38 106 8.7E-4 T 28-03-2018 CJD35_RS02920 560c330a22007e28ed47ab60706cf504 109 Pfam PF11720 Peptidase inhibitor I78 family 48 109 8.7E-12 T 28-03-2018 IPR021719 Proteinase inhibitor I78 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 SUPERFAMILY SSF53067 1 157 9.81E-36 T 28-03-2018 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 5 12 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 Pfam PF00012 Hsp70 protein 3 362 2.1E-62 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 320 334 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 SUPERFAMILY SSF53067 164 363 1.15E-37 T 28-03-2018 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 Gene3D G3DSA:3.30.420.40 1 173 1.2E-42 T 28-03-2018 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 Gene3D G3DSA:2.60.34.10 471 722 1.1E-5 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 Gene3D G3DSA:3.30.420.40 174 346 1.9E-28 T 28-03-2018 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 PRINTS PR00301 70kDa heat shock protein signature 348 368 1.2E-19 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 PRINTS PR00301 70kDa heat shock protein signature 317 333 1.2E-19 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 PRINTS PR00301 70kDa heat shock protein signature 29 41 1.2E-19 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 PRINTS PR00301 70kDa heat shock protein signature 175 185 1.2E-19 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 PRINTS PR00301 70kDa heat shock protein signature 115 135 1.2E-19 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS05425 72fdee68d41a462502500b84aae8ee6a 838 PRINTS PR00301 70kDa heat shock protein signature 1 14 1.2E-19 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CJD35_RS02540 6c6965bef49bcfd9163e79020e2dc645 276 Pfam PF09361 Phasin protein 165 264 1.2E-22 T 28-03-2018 IPR018968 Phasin CJD35_RS02540 6c6965bef49bcfd9163e79020e2dc645 276 Gene3D G3DSA:1.20.120.20 95 273 2.0E-5 T 28-03-2018 CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 Gene3D G3DSA:3.40.50.300 388 793 9.7E-33 T 28-03-2018 CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 Pfam PF03461 TRCF domain 1018 1109 1.7E-24 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 Pfam PF00270 DEAD/DEAH box helicase 615 774 2.5E-14 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 150 1089 0.0 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1124 27.302 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 SMART SM00490 834 918 1.8E-19 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 SMART SM01058 488 584 5.3E-45 T 28-03-2018 IPR003711 CarD-like/TRCF domain CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 SMART SM00487 608 798 1.8E-32 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 Pfam PF00271 Helicase conserved C-terminal domain 812 917 1.7E-17 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 SMART SM00982 1016 1116 1.1E-40 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 SUPERFAMILY SSF143517 1010 1155 7.32E-39 T 28-03-2018 CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 Pfam PF02559 CarD-like/TRCF domain 489 582 1.4E-26 T 28-03-2018 IPR003711 CarD-like/TRCF domain CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 SUPERFAMILY SSF141259 480 556 1.96E-20 T 28-03-2018 IPR003711 CarD-like/TRCF domain CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 SUPERFAMILY SSF52540 533 792 3.37E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 SUPERFAMILY SSF52540 5 351 2.3E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 Gene3D G3DSA:3.40.50.300 808 946 6.4E-22 T 28-03-2018 CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 SUPERFAMILY SSF52540 790 997 4.77E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14050 e984e13f5e00f58a97585d5f20c8216e 1158 SUPERFAMILY SSF52540 358 478 5.84E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS16935 72e17b3979b8f4c60f7a8f33f8dbb93a 352 SUPERFAMILY SSF53474 307 345 4.54E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS16935 72e17b3979b8f4c60f7a8f33f8dbb93a 352 SUPERFAMILY SSF53474 70 278 4.54E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS16935 72e17b3979b8f4c60f7a8f33f8dbb93a 352 Pfam PF10503 Esterase PHB depolymerase 85 276 3.8E-67 T 28-03-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 CJD35_RS16935 72e17b3979b8f4c60f7a8f33f8dbb93a 352 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 88 267 5.3E-38 T 28-03-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 CJD35_RS16935 72e17b3979b8f4c60f7a8f33f8dbb93a 352 Gene3D G3DSA:3.40.50.1820 72 347 1.2E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS16960 725fde5c9c01a915e7043b2661a0eecd 157 SUPERFAMILY SSF141734 20 125 8.89E-39 T 28-03-2018 CJD35_RS16960 725fde5c9c01a915e7043b2661a0eecd 157 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 43 117 2.6E-29 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CJD35_RS16960 725fde5c9c01a915e7043b2661a0eecd 157 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 66 120 1.0E-7 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CJD35_RS15565 8fea327cb56c08f44740efe484c1b62b 556 Gene3D G3DSA:3.30.300.30 450 554 1.5E-23 T 28-03-2018 CJD35_RS15565 8fea327cb56c08f44740efe484c1b62b 556 Gene3D G3DSA:2.30.38.10 362 448 6.9E-23 T 28-03-2018 CJD35_RS15565 8fea327cb56c08f44740efe484c1b62b 556 SUPERFAMILY SSF56801 16 550 3.92E-124 T 28-03-2018 CJD35_RS15565 8fea327cb56c08f44740efe484c1b62b 556 Pfam PF00501 AMP-binding enzyme 28 455 5.4E-83 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJD35_RS15565 8fea327cb56c08f44740efe484c1b62b 556 Gene3D G3DSA:3.40.50.980 13 209 7.9E-34 T 28-03-2018 CJD35_RS15565 8fea327cb56c08f44740efe484c1b62b 556 Gene3D G3DSA:3.40.50.980 210 361 2.3E-32 T 28-03-2018 CJD35_RS15565 8fea327cb56c08f44740efe484c1b62b 556 Pfam PF13193 AMP-binding enzyme C-terminal domain 464 537 1.8E-14 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CJD35_RS06440 55d4e2b168d97b12f3e516036ba66005 174 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 6 163 1.7E-51 T 28-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CJD35_RS06440 55d4e2b168d97b12f3e516036ba66005 174 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 156 9.3E-22 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS06440 55d4e2b168d97b12f3e516036ba66005 174 SUPERFAMILY SSF54593 12 162 3.89E-33 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS06440 55d4e2b168d97b12f3e516036ba66005 174 ProSitePatterns PS00934 Glyoxalase I signature 1. 14 35 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CJD35_RS06440 55d4e2b168d97b12f3e516036ba66005 174 Gene3D G3DSA:3.10.180.10 1 165 1.8E-32 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS21110 4cdf2ceb17331c591f7f6e9bfd09b661 247 Pfam PF13614 AAA domain 1 157 2.1E-19 T 28-03-2018 IPR025669 AAA domain CJD35_RS21110 4cdf2ceb17331c591f7f6e9bfd09b661 247 Gene3D G3DSA:3.40.50.300 1 247 1.1E-38 T 28-03-2018 CJD35_RS21110 4cdf2ceb17331c591f7f6e9bfd09b661 247 SUPERFAMILY SSF52540 1 241 2.92E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12915 4f9d145c06375c177b0133d3574333d8 248 SUPERFAMILY SSF55073 86 246 5.1E-44 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS12915 4f9d145c06375c177b0133d3574333d8 248 Gene3D G3DSA:3.30.70.270 74 248 3.3E-53 T 28-03-2018 CJD35_RS12915 4f9d145c06375c177b0133d3574333d8 248 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 77 247 3.7E-44 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS12915 4f9d145c06375c177b0133d3574333d8 248 SMART SM00267 70 247 9.9E-58 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS12915 4f9d145c06375c177b0133d3574333d8 248 Pfam PF00990 Diguanylate cyclase, GGDEF domain 81 243 2.7E-42 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18330 15b3dbca12f350c842fc741217eeb08e 750 Gene3D G3DSA:3.30.365.10 607 749 4.9E-41 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS18330 15b3dbca12f350c842fc741217eeb08e 750 Gene3D G3DSA:3.30.365.10 440 606 1.1E-35 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS18330 15b3dbca12f350c842fc741217eeb08e 750 SMART SM01008 24 138 6.4E-36 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS18330 15b3dbca12f350c842fc741217eeb08e 750 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 24 136 8.3E-22 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS18330 15b3dbca12f350c842fc741217eeb08e 750 SUPERFAMILY SSF56003 162 748 2.09E-154 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS18330 15b3dbca12f350c842fc741217eeb08e 750 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 165 690 1.0E-111 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS18330 15b3dbca12f350c842fc741217eeb08e 750 Gene3D G3DSA:3.30.365.10 165 272 1.2E-31 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS18330 15b3dbca12f350c842fc741217eeb08e 750 SUPERFAMILY SSF54665 7 151 9.55E-37 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS18330 15b3dbca12f350c842fc741217eeb08e 750 Gene3D G3DSA:3.30.365.10 273 439 1.9E-27 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS18330 15b3dbca12f350c842fc741217eeb08e 750 Gene3D G3DSA:3.90.1170.50 8 137 9.6E-33 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS21450 15b3dbca12f350c842fc741217eeb08e 750 Gene3D G3DSA:3.30.365.10 607 749 4.9E-41 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS21450 15b3dbca12f350c842fc741217eeb08e 750 Gene3D G3DSA:3.30.365.10 440 606 1.1E-35 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS21450 15b3dbca12f350c842fc741217eeb08e 750 SMART SM01008 24 138 6.4E-36 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS21450 15b3dbca12f350c842fc741217eeb08e 750 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 24 136 8.3E-22 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS21450 15b3dbca12f350c842fc741217eeb08e 750 SUPERFAMILY SSF56003 162 748 2.09E-154 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS21450 15b3dbca12f350c842fc741217eeb08e 750 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 165 690 1.0E-111 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS21450 15b3dbca12f350c842fc741217eeb08e 750 Gene3D G3DSA:3.30.365.10 165 272 1.2E-31 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS21450 15b3dbca12f350c842fc741217eeb08e 750 SUPERFAMILY SSF54665 7 151 9.55E-37 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS21450 15b3dbca12f350c842fc741217eeb08e 750 Gene3D G3DSA:3.30.365.10 273 439 1.9E-27 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS21450 15b3dbca12f350c842fc741217eeb08e 750 Gene3D G3DSA:3.90.1170.50 8 137 9.6E-33 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 Gene3D G3DSA:2.140.10.10 617 770 5.0E-10 T 28-03-2018 CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 Pfam PF01011 PQQ enzyme repeat 425 450 4.2E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 SMART SM00564 623 669 250.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 SMART SM00564 697 730 86.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 SMART SM00564 264 296 360.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 SMART SM00564 321 362 120.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 SMART SM00564 390 440 5.2 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 SMART SM00564 209 240 0.013 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 SUPERFAMILY SSF50998 151 500 3.92E-146 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 SUPERFAMILY SSF50998 537 776 3.92E-146 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 Gene3D G3DSA:2.140.10.10 149 592 7.5E-82 T 28-03-2018 CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 Pfam PF13360 PQQ-like domain 222 361 1.2E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 Pfam PF13360 PQQ-like domain 652 742 1.6E-5 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS15650 5c1dfd403cd7bc38ff99788ffa79409f 778 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 8 776 6.8E-275 T 28-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 CJD35_RS07740 1b3fea7058547cfa32ac6c35e30c8a1b 611 SUPERFAMILY SSF56935 22 611 5.11E-118 T 28-03-2018 CJD35_RS07740 1b3fea7058547cfa32ac6c35e30c8a1b 611 Pfam PF07715 TonB-dependent Receptor Plug Domain 36 143 4.7E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS07740 1b3fea7058547cfa32ac6c35e30c8a1b 611 Pfam PF00593 TonB dependent receptor 177 610 2.8E-49 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07740 1b3fea7058547cfa32ac6c35e30c8a1b 611 Gene3D G3DSA:2.40.170.20 153 611 3.1E-75 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07740 1b3fea7058547cfa32ac6c35e30c8a1b 611 Gene3D G3DSA:2.170.130.10 12 152 1.1E-31 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS18640 bcd4fd6c882bb5dd1bf165f1195852f8 271 SUPERFAMILY SSF52833 161 264 3.09E-10 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS18640 bcd4fd6c882bb5dd1bf165f1195852f8 271 Pfam PF13728 F plasmid transfer operon protein 47 260 1.6E-75 T 28-03-2018 CJD35_RS18640 bcd4fd6c882bb5dd1bf165f1195852f8 271 TIGRFAM TIGR02740 TraF-like: TraF-like protein 9 268 4.3E-75 T 28-03-2018 IPR014111 Type IV conjugative transfer system protein TraF CJD35_RS18640 bcd4fd6c882bb5dd1bf165f1195852f8 271 Gene3D G3DSA:3.40.30.10 147 269 2.6E-10 T 28-03-2018 CJD35_RS18015 0a1b1bc6c75da77edd318d4fd5fa3f4a 569 SUPERFAMILY SSF52518 354 556 2.36E-55 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS18015 0a1b1bc6c75da77edd318d4fd5fa3f4a 569 Gene3D G3DSA:3.40.50.970 1 183 1.5E-41 T 28-03-2018 CJD35_RS18015 0a1b1bc6c75da77edd318d4fd5fa3f4a 569 SUPERFAMILY SSF52518 1 177 6.58E-43 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS18015 0a1b1bc6c75da77edd318d4fd5fa3f4a 569 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 168 1.8E-40 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CJD35_RS18015 0a1b1bc6c75da77edd318d4fd5fa3f4a 569 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 316 1.1E-28 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CJD35_RS18015 0a1b1bc6c75da77edd318d4fd5fa3f4a 569 Gene3D G3DSA:3.40.50.1220 184 330 1.4E-34 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS18015 0a1b1bc6c75da77edd318d4fd5fa3f4a 569 Gene3D G3DSA:3.40.50.970 334 534 1.5E-35 T 28-03-2018 CJD35_RS18015 0a1b1bc6c75da77edd318d4fd5fa3f4a 569 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 377 523 1.0E-33 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CJD35_RS18015 0a1b1bc6c75da77edd318d4fd5fa3f4a 569 SUPERFAMILY SSF52467 179 346 2.18E-40 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS18015 0a1b1bc6c75da77edd318d4fd5fa3f4a 569 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 414 433 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CJD35_RS21720 f98ba592a24ecfce722516cc110a24ff 425 SUPERFAMILY SSF56954 4 416 3.14E-66 T 28-03-2018 CJD35_RS21720 f98ba592a24ecfce722516cc110a24ff 425 Gene3D G3DSA:1.20.1600.10 22 417 1.4E-52 T 28-03-2018 CJD35_RS21720 f98ba592a24ecfce722516cc110a24ff 425 Pfam PF02321 Outer membrane efflux protein 252 416 8.3E-18 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS21720 f98ba592a24ecfce722516cc110a24ff 425 Pfam PF02321 Outer membrane efflux protein 38 218 8.6E-15 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS03640 b67236405d7a1620b8756d73d22267bb 386 SUPERFAMILY SSF55073 224 381 1.32E-43 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS03640 b67236405d7a1620b8756d73d22267bb 386 Pfam PF00990 Diguanylate cyclase, GGDEF domain 219 378 1.1E-39 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS03640 b67236405d7a1620b8756d73d22267bb 386 SMART SM00267 208 382 4.2E-46 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS03640 b67236405d7a1620b8756d73d22267bb 386 Gene3D G3DSA:3.30.70.270 209 383 1.0E-49 T 28-03-2018 CJD35_RS03640 b67236405d7a1620b8756d73d22267bb 386 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 218 382 4.8E-42 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS10175 3a37462abf7388283a35cac4262fd4b1 270 Gene3D G3DSA:3.40.50.720 7 158 2.4E-19 T 28-03-2018 CJD35_RS10175 3a37462abf7388283a35cac4262fd4b1 270 SUPERFAMILY SSF51735 10 158 5.63E-19 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10175 3a37462abf7388283a35cac4262fd4b1 270 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 7 266 20.948 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CJD35_RS10175 3a37462abf7388283a35cac4262fd4b1 270 SUPERFAMILY SSF48179 160 267 1.02E-25 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS10175 3a37462abf7388283a35cac4262fd4b1 270 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 161 265 1.4E-27 T 28-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CJD35_RS10175 3a37462abf7388283a35cac4262fd4b1 270 Gene3D G3DSA:1.10.3730.10 159 270 1.5E-30 T 28-03-2018 CJD35_RS10175 3a37462abf7388283a35cac4262fd4b1 270 PIRSF PIRSF000193 6 264 7.2E-51 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CJD35_RS07680 542ed1c828f9bc48e7156c6543d7bd07 189 Pfam PF00486 Transcriptional regulatory protein, C terminal 104 178 7.5E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS07680 542ed1c828f9bc48e7156c6543d7bd07 189 SMART SM00862 103 178 1.4E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS07680 542ed1c828f9bc48e7156c6543d7bd07 189 SUPERFAMILY SSF46894 79 179 1.16E-25 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS07680 542ed1c828f9bc48e7156c6543d7bd07 189 Gene3D G3DSA:1.10.10.10 70 183 5.3E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS15720 21531a30a44334170d5b9f3da77dc56a 199 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 5 199 42.766 T 28-03-2018 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 CJD35_RS15720 21531a30a44334170d5b9f3da77dc56a 199 SUPERFAMILY SSF55469 18 195 6.15E-41 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CJD35_RS15720 21531a30a44334170d5b9f3da77dc56a 199 Pfam PF00881 Nitroreductase family 20 177 9.7E-12 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CJD35_RS15720 21531a30a44334170d5b9f3da77dc56a 199 Gene3D G3DSA:3.40.109.10 12 197 3.8E-30 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CJD35_RS14900 be15592c49409960cb2db177f4a81407 444 Pfam PF07715 TonB-dependent Receptor Plug Domain 91 203 4.5E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS14900 be15592c49409960cb2db177f4a81407 444 SUPERFAMILY SSF56935 79 262 1.47E-36 T 28-03-2018 CJD35_RS14900 be15592c49409960cb2db177f4a81407 444 SUPERFAMILY SSF56935 367 411 1.47E-36 T 28-03-2018 CJD35_RS14900 be15592c49409960cb2db177f4a81407 444 Gene3D G3DSA:2.170.130.10 87 209 1.9E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS14900 be15592c49409960cb2db177f4a81407 444 Gene3D G3DSA:2.40.170.20 210 435 3.5E-6 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07335 e8487731346c5d1f3f3aab5a3db993fd 283 Gene3D G3DSA:3.30.470.10 1 134 2.3E-28 T 28-03-2018 CJD35_RS07335 e8487731346c5d1f3f3aab5a3db993fd 283 SUPERFAMILY SSF56752 3 276 1.96E-69 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CJD35_RS07335 e8487731346c5d1f3f3aab5a3db993fd 283 Pfam PF01063 Amino-transferase class IV 30 251 1.6E-37 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CJD35_RS07335 e8487731346c5d1f3f3aab5a3db993fd 283 Gene3D G3DSA:3.20.10.10 135 282 4.0E-33 T 28-03-2018 CJD35_RS06935 93158c26638199800ec793a23b54197b 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 246 1.8E-67 T 28-03-2018 CJD35_RS06935 93158c26638199800ec793a23b54197b 267 Gene3D G3DSA:3.40.50.720 46 257 5.7E-61 T 28-03-2018 CJD35_RS06935 93158c26638199800ec793a23b54197b 267 Gene3D G3DSA:3.40.50.720 1 45 1.9E-12 T 28-03-2018 CJD35_RS06935 93158c26638199800ec793a23b54197b 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06935 93158c26638199800ec793a23b54197b 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06935 93158c26638199800ec793a23b54197b 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.0E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06935 93158c26638199800ec793a23b54197b 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06935 93158c26638199800ec793a23b54197b 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06935 93158c26638199800ec793a23b54197b 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06935 93158c26638199800ec793a23b54197b 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06935 93158c26638199800ec793a23b54197b 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06935 93158c26638199800ec793a23b54197b 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.5E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06935 93158c26638199800ec793a23b54197b 267 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 188 4.9E-4 T 28-03-2018 CJD35_RS06935 93158c26638199800ec793a23b54197b 267 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS06935 93158c26638199800ec793a23b54197b 267 SUPERFAMILY SSF51735 1 247 1.62E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS08745 4949c3cdb35f4ccd7c9af9a4bd46199b 180 Gene3D G3DSA:3.30.70.1560 86 162 7.1E-25 T 28-03-2018 CJD35_RS08745 4949c3cdb35f4ccd7c9af9a4bd46199b 180 Gene3D G3DSA:3.30.70.580 1 85 2.0E-15 T 28-03-2018 CJD35_RS08745 4949c3cdb35f4ccd7c9af9a4bd46199b 180 Pfam PF00849 RNA pseudouridylate synthase 3 150 2.6E-14 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS08745 4949c3cdb35f4ccd7c9af9a4bd46199b 180 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 41 55 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CJD35_RS08745 4949c3cdb35f4ccd7c9af9a4bd46199b 180 SUPERFAMILY SSF55120 3 178 7.36E-40 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS08745 4949c3cdb35f4ccd7c9af9a4bd46199b 180 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 7 178 5.0E-51 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CJD35_RS09715 e764797a1b5b28a79e2d0215fecd1753 336 SUPERFAMILY SSF53448 2 222 3.09E-34 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS09715 e764797a1b5b28a79e2d0215fecd1753 336 Gene3D G3DSA:3.90.550.10 2 219 3.6E-29 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS09715 e764797a1b5b28a79e2d0215fecd1753 336 Pfam PF00535 Glycosyl transferase family 2 5 171 3.4E-27 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 SUPERFAMILY SSF57783 2 99 4.93E-34 T 28-03-2018 CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 SMART SM00493 263 334 4.9E-13 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 TIGRFAM TIGR01391 dnaG: DNA primase 4 421 1.4E-124 T 28-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 Hamap MF_00974 DNA primase [dnaG]. 2 628 25.3 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 SMART SM00400 34 88 2.0E-30 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 Pfam PF08275 DNA primase catalytic core, N-terminal domain 122 255 1.6E-31 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 Gene3D G3DSA:3.90.980.10 105 244 3.1E-36 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 SUPERFAMILY SSF56731 112 424 1.57E-95 T 28-03-2018 CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 Gene3D G3DSA:3.40.1360.10 245 372 2.4E-34 T 28-03-2018 CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 Pfam PF01807 CHC2 zinc finger 5 97 3.0E-33 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 Gene3D G3DSA:3.90.580.10 1 100 1.7E-31 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 PIRSF PIRSF002811 1 621 1.9E-128 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CJD35_RS14880 0309c6a4370467ac17fe8318a12c47a7 633 Pfam PF13662 Toprim domain 264 327 7.3E-17 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 Gene3D G3DSA:1.10.1420.10 415 547 2.9E-19 T 28-03-2018 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 PIRSF PIRSF037677 10 221 4.4E-32 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 PIRSF PIRSF037677 232 823 6.6E-113 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 SMART SM00533 290 607 2.1E-60 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 Pfam PF00488 MutS domain V 629 816 9.6E-82 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 Gene3D G3DSA:3.40.1170.10 9 143 4.3E-44 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 Gene3D G3DSA:3.40.50.300 579 824 2.1E-40 T 28-03-2018 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 SMART SM00534 626 813 4.3E-107 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 SUPERFAMILY SSF55271 13 127 2.22E-36 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 Gene3D G3DSA:1.10.1420.10 270 414 1.9E-27 T 28-03-2018 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 Gene3D G3DSA:3.30.420.110 144 268 1.7E-21 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 Pfam PF05192 MutS domain III 276 571 3.3E-32 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 SUPERFAMILY SSF48334 274 576 7.19E-68 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 15 875 1.1E-243 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 14 869 21.992 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 Pfam PF05190 MutS family domain IV 437 527 2.7E-16 T 28-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 SUPERFAMILY SSF53150 129 287 1.27E-32 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 SUPERFAMILY SSF52540 590 816 1.18E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 707 723 - T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 Pfam PF05188 MutS domain II 140 253 7.5E-14 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CJD35_RS05940 b4eb8b9d5c66f74be728b72c9dff6232 883 Pfam PF01624 MutS domain I 15 131 1.9E-37 T 28-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CJD35_RS03295 94cc47f0e1bdf648fdf447330673173f 229 Gene3D G3DSA:2.60.120.380 142 229 2.7E-7 T 28-03-2018 CJD35_RS15035 a78a53b2cb184a97ae7b72943a0d0f61 306 Gene3D G3DSA:1.10.10.10 2 80 6.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS15035 a78a53b2cb184a97ae7b72943a0d0f61 306 SUPERFAMILY SSF53850 85 289 4.19E-41 T 28-03-2018 CJD35_RS15035 a78a53b2cb184a97ae7b72943a0d0f61 306 Pfam PF03466 LysR substrate binding domain 86 286 2.4E-40 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS15035 a78a53b2cb184a97ae7b72943a0d0f61 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 59 2.1E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS15035 a78a53b2cb184a97ae7b72943a0d0f61 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 36 2.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS15035 a78a53b2cb184a97ae7b72943a0d0f61 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 47 2.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS15035 a78a53b2cb184a97ae7b72943a0d0f61 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 15 26 2.0E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS15035 a78a53b2cb184a97ae7b72943a0d0f61 306 SUPERFAMILY SSF46785 3 81 3.05E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS15035 a78a53b2cb184a97ae7b72943a0d0f61 306 Gene3D G3DSA:3.40.190.10 86 173 1.1E-12 T 28-03-2018 CJD35_RS15035 a78a53b2cb184a97ae7b72943a0d0f61 306 Gene3D G3DSA:3.40.190.10 174 257 1.3E-22 T 28-03-2018 CJD35_RS06355 133eb1d709c5989dd2ba003de6f284c2 268 PRINTS PR00412 Epoxide hydrolase signature 24 39 1.6E-8 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS06355 133eb1d709c5989dd2ba003de6f284c2 268 PRINTS PR00412 Epoxide hydrolase signature 83 96 1.6E-8 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS06355 133eb1d709c5989dd2ba003de6f284c2 268 PRINTS PR00412 Epoxide hydrolase signature 69 82 1.6E-8 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS06355 133eb1d709c5989dd2ba003de6f284c2 268 PRINTS PR00412 Epoxide hydrolase signature 204 220 1.6E-8 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS06355 133eb1d709c5989dd2ba003de6f284c2 268 PRINTS PR00412 Epoxide hydrolase signature 235 257 1.6E-8 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS06355 133eb1d709c5989dd2ba003de6f284c2 268 SUPERFAMILY SSF53474 1 259 5.49E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS06355 133eb1d709c5989dd2ba003de6f284c2 268 Gene3D G3DSA:3.40.50.1820 1 260 3.2E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS06355 133eb1d709c5989dd2ba003de6f284c2 268 Pfam PF00561 alpha/beta hydrolase fold 1 245 2.0E-21 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS06355 133eb1d709c5989dd2ba003de6f284c2 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 24 39 1.3E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS06355 133eb1d709c5989dd2ba003de6f284c2 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 69 82 1.3E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS06355 133eb1d709c5989dd2ba003de6f284c2 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 83 96 1.3E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS07135 ff2140bc6a946a33cb432fb3f988e083 429 Pfam PF00709 Adenylosuccinate synthetase 5 421 1.2E-168 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CJD35_RS07135 ff2140bc6a946a33cb432fb3f988e083 429 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 28-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CJD35_RS07135 ff2140bc6a946a33cb432fb3f988e083 429 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 132 143 - T 28-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CJD35_RS07135 ff2140bc6a946a33cb432fb3f988e083 429 SMART SM00788 3 422 3.9E-279 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CJD35_RS07135 ff2140bc6a946a33cb432fb3f988e083 429 Gene3D G3DSA:3.40.440.10 168 264 7.5E-22 T 28-03-2018 CJD35_RS07135 ff2140bc6a946a33cb432fb3f988e083 429 Gene3D G3DSA:3.40.440.10 1 155 7.7E-50 T 28-03-2018 CJD35_RS07135 ff2140bc6a946a33cb432fb3f988e083 429 SUPERFAMILY SSF52540 1 423 4.99E-166 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS07135 ff2140bc6a946a33cb432fb3f988e083 429 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 429 204.897 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CJD35_RS07135 ff2140bc6a946a33cb432fb3f988e083 429 Gene3D G3DSA:3.90.170.10 265 429 6.5E-68 T 28-03-2018 CJD35_RS07135 ff2140bc6a946a33cb432fb3f988e083 429 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 427 1.1E-152 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CJD35_RS07940 0a4559f7e3d0cd65fd43fd133e916249 773 SUPERFAMILY SSF56935 9 613 6.96E-117 T 28-03-2018 CJD35_RS07940 0a4559f7e3d0cd65fd43fd133e916249 773 SUPERFAMILY SSF56935 647 773 6.96E-117 T 28-03-2018 CJD35_RS07940 0a4559f7e3d0cd65fd43fd133e916249 773 Gene3D G3DSA:2.40.170.20 152 773 1.3E-72 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07940 0a4559f7e3d0cd65fd43fd133e916249 773 Gene3D G3DSA:2.170.130.10 11 151 8.2E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS07940 0a4559f7e3d0cd65fd43fd133e916249 773 Pfam PF07715 TonB-dependent Receptor Plug Domain 34 142 1.3E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS07940 0a4559f7e3d0cd65fd43fd133e916249 773 Pfam PF00593 TonB dependent receptor 271 754 8.9E-42 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS14000 efafed7f07c50d8622795323f8d4d9b1 271 SUPERFAMILY SSF52402 152 270 1.34E-17 T 28-03-2018 CJD35_RS14000 efafed7f07c50d8622795323f8d4d9b1 271 Gene3D G3DSA:3.40.50.620 150 271 5.5E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS14000 efafed7f07c50d8622795323f8d4d9b1 271 SUPERFAMILY SSF52402 1 141 6.2E-11 T 28-03-2018 CJD35_RS14000 efafed7f07c50d8622795323f8d4d9b1 271 Pfam PF00582 Universal stress protein family 152 269 2.2E-8 T 28-03-2018 IPR006016 UspA GO:0006950 CJD35_RS14000 efafed7f07c50d8622795323f8d4d9b1 271 Gene3D G3DSA:3.40.50.620 1 143 4.3E-10 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS01430 94928f046e6d1cc591f2565f6af24900 53 Pfam PF04964 Flp/Fap pilin component 8 50 3.4E-18 T 28-03-2018 IPR007047 Flp/Fap pilin component CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 Gene3D G3DSA:3.40.50.1440 10 217 2.8E-42 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 PRINTS PR00423 Cell division protein FtsZ signature 192 214 5.8E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 PRINTS PR00423 Cell division protein FtsZ signature 101 121 5.8E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 PRINTS PR00423 Cell division protein FtsZ signature 129 150 5.8E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 PRINTS PR00423 Cell division protein FtsZ signature 215 236 5.8E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 16 176 5.7E-40 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 SUPERFAMILY SSF52490 15 211 2.49E-69 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 SMART SM00864 16 208 9.1E-110 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 SUPERFAMILY SSF55307 207 322 1.1E-43 T 28-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 ProSitePatterns PS01134 FtsZ protein signature 1. 47 81 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 12 415 37.546 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 13 326 1.4E-124 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 Gene3D G3DSA:3.30.1330.20 218 327 1.9E-46 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 ProSitePatterns PS01135 FtsZ protein signature 2. 100 121 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 SMART SM00865 210 328 2.8E-54 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CJD35_RS10480 d4d1714d0322400981f7bfe5fea8ce3b 473 Pfam PF12327 FtsZ family, C-terminal domain 225 320 2.5E-37 T 28-03-2018 IPR024757 Cell division protein FtsZ, C-terminal CJD35_RS04280 51bc89752d1d3dcc3130c465e017e00f 378 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 23 374 7.6E-137 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 CJD35_RS04280 51bc89752d1d3dcc3130c465e017e00f 378 Hamap MF_00296 Homoserine O-acetyltransferase [metX]. 2 375 46.628 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 CJD35_RS04280 51bc89752d1d3dcc3130c465e017e00f 378 Gene3D G3DSA:3.40.50.1820 30 378 1.2E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS04280 51bc89752d1d3dcc3130c465e017e00f 378 Pfam PF00561 alpha/beta hydrolase fold 51 360 8.9E-33 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS04280 51bc89752d1d3dcc3130c465e017e00f 378 SUPERFAMILY SSF53474 19 374 1.36E-101 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS04280 51bc89752d1d3dcc3130c465e017e00f 378 PIRSF PIRSF000443 6 377 3.5E-136 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 CJD35_RS12810 ab5cc183cd7416fadf7d785b397a7d1e 550 SUPERFAMILY SSF51905 307 448 2.12E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS12810 ab5cc183cd7416fadf7d785b397a7d1e 550 SUPERFAMILY SSF51905 3 211 2.12E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS12810 ab5cc183cd7416fadf7d785b397a7d1e 550 Pfam PF13450 NAD(P)-binding Rossmann-like domain 13 60 1.0E-6 T 28-03-2018 CJD35_RS12810 ab5cc183cd7416fadf7d785b397a7d1e 550 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 8.8E-6 T 28-03-2018 CJD35_RS12810 ab5cc183cd7416fadf7d785b397a7d1e 550 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 180 195 8.8E-6 T 28-03-2018 CJD35_RS12810 ab5cc183cd7416fadf7d785b397a7d1e 550 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 446 547 2.0E-51 T 28-03-2018 CJD35_RS12810 ab5cc183cd7416fadf7d785b397a7d1e 550 SUPERFAMILY SSF54373 213 307 2.98E-34 T 28-03-2018 CJD35_RS12810 ab5cc183cd7416fadf7d785b397a7d1e 550 SUPERFAMILY SSF54862 450 550 1.36E-30 T 28-03-2018 CJD35_RS12810 ab5cc183cd7416fadf7d785b397a7d1e 550 Gene3D G3DSA:3.50.50.60 1 385 6.7E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS21400 232a191ff58d7bb19d23fcf2a303a38f 143 Pfam PF03061 Thioesterase superfamily 56 129 2.5E-14 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CJD35_RS21400 232a191ff58d7bb19d23fcf2a303a38f 143 SUPERFAMILY SSF54637 34 140 1.82E-25 T 28-03-2018 IPR029069 HotDog domain CJD35_RS21400 232a191ff58d7bb19d23fcf2a303a38f 143 Gene3D G3DSA:3.10.129.10 2 141 1.1E-24 T 28-03-2018 CJD35_RS21400 232a191ff58d7bb19d23fcf2a303a38f 143 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 42 140 9.9E-11 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CJD35_RS18280 232a191ff58d7bb19d23fcf2a303a38f 143 Pfam PF03061 Thioesterase superfamily 56 129 2.5E-14 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CJD35_RS18280 232a191ff58d7bb19d23fcf2a303a38f 143 SUPERFAMILY SSF54637 34 140 1.82E-25 T 28-03-2018 IPR029069 HotDog domain CJD35_RS18280 232a191ff58d7bb19d23fcf2a303a38f 143 Gene3D G3DSA:3.10.129.10 2 141 1.1E-24 T 28-03-2018 CJD35_RS18280 232a191ff58d7bb19d23fcf2a303a38f 143 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 42 140 9.9E-11 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CJD35_RS09035 1a692ae20a6fbde50cd2be03a5449c0e 333 Gene3D G3DSA:3.20.20.70 80 333 5.5E-44 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS09035 1a692ae20a6fbde50cd2be03a5449c0e 333 Hamap MF_00443 Thiazole synthase [thiG]. 81 333 40.756 T 28-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CJD35_RS09035 1a692ae20a6fbde50cd2be03a5449c0e 333 SUPERFAMILY SSF110399 80 320 1.31E-81 T 28-03-2018 CJD35_RS09035 1a692ae20a6fbde50cd2be03a5449c0e 333 SUPERFAMILY SSF54285 9 71 6.87E-16 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CJD35_RS09035 1a692ae20a6fbde50cd2be03a5449c0e 333 Pfam PF05690 Thiazole biosynthesis protein ThiG 84 328 5.8E-106 T 28-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CJD35_RS09035 1a692ae20a6fbde50cd2be03a5449c0e 333 Pfam PF02597 ThiS family 10 72 2.5E-10 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CJD35_RS09035 1a692ae20a6fbde50cd2be03a5449c0e 333 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 9 72 1.1E-19 T 28-03-2018 IPR010035 ThiS, thiamine-biosynthesis CJD35_RS09035 1a692ae20a6fbde50cd2be03a5449c0e 333 Gene3D G3DSA:3.10.20.30 7 79 2.6E-20 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS08600 944e5201f6b2b6767ba78d15333f08bf 122 SMART SM01374 1 122 3.1E-85 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CJD35_RS08600 944e5201f6b2b6767ba78d15333f08bf 122 Gene3D G3DSA:2.40.150.20 1 122 1.2E-53 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CJD35_RS08600 944e5201f6b2b6767ba78d15333f08bf 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.6E-55 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CJD35_RS08600 944e5201f6b2b6767ba78d15333f08bf 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.6E-57 T 28-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CJD35_RS08600 944e5201f6b2b6767ba78d15333f08bf 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 28-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08600 944e5201f6b2b6767ba78d15333f08bf 122 SUPERFAMILY SSF50193 1 122 5.36E-52 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CJD35_RS08600 944e5201f6b2b6767ba78d15333f08bf 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 28.259 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 SUPERFAMILY SSF52935 324 474 1.7E-37 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 Gene3D G3DSA:3.20.20.60 2 90 5.7E-16 T 28-03-2018 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 SUPERFAMILY SSF51621 4 81 3.49E-93 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 SUPERFAMILY SSF51621 161 340 3.49E-93 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 Pfam PF02887 Pyruvate kinase, alpha/beta domain 359 471 2.1E-28 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 Gene3D G3DSA:2.40.33.10 91 170 1.4E-22 T 28-03-2018 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 9 474 2.5E-144 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 SUPERFAMILY SSF50800 77 171 4.71E-23 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 Gene3D G3DSA:3.20.20.60 171 322 1.2E-58 T 28-03-2018 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 Gene3D G3DSA:3.40.1380.20 323 475 3.1E-46 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 PRINTS PR01050 Pyruvate kinase family signature 270 294 2.1E-61 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 PRINTS PR01050 Pyruvate kinase family signature 66 82 2.1E-61 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 PRINTS PR01050 Pyruvate kinase family signature 295 313 2.1E-61 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 PRINTS PR01050 Pyruvate kinase family signature 218 244 2.1E-61 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 PRINTS PR01050 Pyruvate kinase family signature 314 330 2.1E-61 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 PRINTS PR01050 Pyruvate kinase family signature 191 205 2.1E-61 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 PRINTS PR01050 Pyruvate kinase family signature 245 269 2.1E-61 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS02025 170bf631908748e9d8ceacb87c5391c0 484 Pfam PF00224 Pyruvate kinase, barrel domain 9 337 5.4E-108 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CJD35_RS20515 8d5ae3c74d0535f40f434411656261f5 100 Pfam PF03524 Conjugal transfer protein 2 75 3.6E-20 T 28-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CJD35_RS03450 56d943a476ec7f9479c4412c3bfc4e7a 148 Pfam PF01124 MAPEG family 11 128 1.1E-23 T 28-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CJD35_RS03450 56d943a476ec7f9479c4412c3bfc4e7a 148 SUPERFAMILY SSF161084 8 129 7.06E-23 T 28-03-2018 CJD35_RS03450 56d943a476ec7f9479c4412c3bfc4e7a 148 Gene3D G3DSA:1.20.120.550 1 137 4.9E-20 T 28-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CJD35_RS10385 ec50ad8fe198621e72ce8fddca0fc299 331 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 301 1.6E-64 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS10385 ec50ad8fe198621e72ce8fddca0fc299 331 Gene3D G3DSA:3.40.50.1100 22 135 2.2E-37 T 28-03-2018 CJD35_RS10385 ec50ad8fe198621e72ce8fddca0fc299 331 SUPERFAMILY SSF53686 5 323 1.57E-94 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS10385 ec50ad8fe198621e72ce8fddca0fc299 331 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CJD35_RS10385 ec50ad8fe198621e72ce8fddca0fc299 331 Gene3D G3DSA:3.40.50.1100 136 315 5.3E-51 T 28-03-2018 CJD35_RS01375 0b1e77d0198c04a823833cfe7c5cebca 90 SUPERFAMILY SSF116842 15 79 1.15E-19 T 28-03-2018 CJD35_RS01375 0b1e77d0198c04a823833cfe7c5cebca 90 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 20 80 15.17 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CJD35_RS01375 0b1e77d0198c04a823833cfe7c5cebca 90 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 20 59 2.0E-11 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CJD35_RS01375 0b1e77d0198c04a823833cfe7c5cebca 90 Pfam PF02609 Exonuclease VII small subunit 21 71 4.4E-20 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CJD35_RS01375 0b1e77d0198c04a823833cfe7c5cebca 90 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 20 75 2.2E-23 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CJD35_RS01375 0b1e77d0198c04a823833cfe7c5cebca 90 Gene3D G3DSA:1.10.287.1040 18 87 4.7E-24 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SUPERFAMILY SSF50249 350 447 7.01E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SUPERFAMILY SSF50249 12 120 3.58E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Gene3D G3DSA:2.40.50.140 114 186 5.5E-4 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Gene3D G3DSA:2.40.50.140 192 274 2.6E-25 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Gene3D G3DSA:2.40.50.140 366 447 2.7E-16 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Pfam PF00575 S1 RNA binding domain 198 268 1.6E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Pfam PF00575 S1 RNA binding domain 462 533 6.7E-13 T 28-03-2018 IPR003029 S1 domain GO:0003676 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Pfam PF00575 S1 RNA binding domain 369 442 1.4E-13 T 28-03-2018 IPR003029 S1 domain GO:0003676 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Pfam PF00575 S1 RNA binding domain 112 179 1.3E-9 T 28-03-2018 IPR003029 S1 domain GO:0003676 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Pfam PF00575 S1 RNA binding domain 27 94 6.2E-11 T 28-03-2018 IPR003029 S1 domain GO:0003676 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Pfam PF00575 S1 RNA binding domain 282 355 9.3E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SUPERFAMILY SSF50249 459 547 6.94E-13 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS12225 92987542e07b3081838a8162624452b3 570 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 11 532 7.5E-184 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SUPERFAMILY SSF50249 198 285 4.22E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SUPERFAMILY SSF50249 114 190 1.56E-10 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Gene3D G3DSA:2.40.50.140 283 356 9.9E-25 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 PRINTS PR00681 Ribosomal protein S1 signature 116 132 3.5E-83 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 PRINTS PR00681 Ribosomal protein S1 signature 47 61 3.5E-83 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 PRINTS PR00681 Ribosomal protein S1 signature 92 111 3.5E-83 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 PRINTS PR00681 Ribosomal protein S1 signature 220 241 3.5E-83 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 PRINTS PR00681 Ribosomal protein S1 signature 338 356 3.5E-83 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 PRINTS PR00681 Ribosomal protein S1 signature 298 317 3.5E-83 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 PRINTS PR00681 Ribosomal protein S1 signature 134 151 3.5E-83 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 PRINTS PR00681 Ribosomal protein S1 signature 29 47 3.5E-83 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 PRINTS PR00681 Ribosomal protein S1 signature 163 183 3.5E-83 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Gene3D G3DSA:2.40.50.140 29 94 1.4E-10 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 PIRSF PIRSF002111 3 547 3.3E-186 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 Gene3D G3DSA:2.40.50.140 460 542 1.7E-11 T 28-03-2018 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SUPERFAMILY SSF50249 263 366 4.25E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SMART SM00316 198 268 2.7E-26 T 28-03-2018 IPR022967 RNA-binding domain, S1 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SMART SM00316 111 179 0.0018 T 28-03-2018 IPR022967 RNA-binding domain, S1 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SMART SM00316 283 355 7.3E-25 T 28-03-2018 IPR022967 RNA-binding domain, S1 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SMART SM00316 370 442 3.1E-17 T 28-03-2018 IPR022967 RNA-binding domain, S1 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SMART SM00316 27 95 4.6E-10 T 28-03-2018 IPR022967 RNA-binding domain, S1 CJD35_RS12225 92987542e07b3081838a8162624452b3 570 SMART SM00316 462 533 1.3E-12 T 28-03-2018 IPR022967 RNA-binding domain, S1 CJD35_RS22145 3f9c7cb9488a205a26baa72ff7696e2c 326 Pfam PF08241 Methyltransferase domain 69 126 7.2E-6 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CJD35_RS22145 3f9c7cb9488a205a26baa72ff7696e2c 326 Gene3D G3DSA:1.20.5.500 258 305 0.0014 T 28-03-2018 CJD35_RS22145 3f9c7cb9488a205a26baa72ff7696e2c 326 Gene3D G3DSA:3.40.50.150 38 184 2.6E-10 T 28-03-2018 CJD35_RS22145 3f9c7cb9488a205a26baa72ff7696e2c 326 SUPERFAMILY SSF53335 29 173 3.3E-14 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS01025 fc801f7c884a9e4214cb4e32f589f311 165 Pfam PF06347 Bacterial SH3 domain 46 99 5.9E-12 T 28-03-2018 IPR010466 Protein of unknown function DUF1058 CJD35_RS01025 fc801f7c884a9e4214cb4e32f589f311 165 Pfam PF06347 Bacterial SH3 domain 109 161 8.1E-11 T 28-03-2018 IPR010466 Protein of unknown function DUF1058 CJD35_RS01025 fc801f7c884a9e4214cb4e32f589f311 165 Gene3D G3DSA:2.40.50.110 106 159 7.0E-4 T 28-03-2018 CJD35_RS01025 fc801f7c884a9e4214cb4e32f589f311 165 Gene3D G3DSA:2.30.30.410 39 105 0.034 T 28-03-2018 CJD35_RS02110 49e66c21d676661a347e60415f151e4e 77 Gene3D G3DSA:3.30.300.90 3 75 8.3E-23 T 28-03-2018 CJD35_RS02110 49e66c21d676661a347e60415f151e4e 77 Pfam PF01722 BolA-like protein 27 76 1.5E-13 T 28-03-2018 IPR002634 BolA protein CJD35_RS02110 49e66c21d676661a347e60415f151e4e 77 SUPERFAMILY SSF82657 1 76 1.26E-23 T 28-03-2018 IPR002634 BolA protein CJD35_RS02110 49e66c21d676661a347e60415f151e4e 77 PIRSF PIRSF003113 1 77 5.0E-18 T 28-03-2018 IPR002634 BolA protein CJD35_RS08170 f7187c40b5edcc6e0b454090fcd5bb18 276 SUPERFAMILY SSF50249 206 272 2.57E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS08170 f7187c40b5edcc6e0b454090fcd5bb18 276 PRINTS PR00050 Cold shock protein signature 210 225 1.6E-9 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS08170 f7187c40b5edcc6e0b454090fcd5bb18 276 PRINTS PR00050 Cold shock protein signature 231 240 1.6E-9 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS08170 f7187c40b5edcc6e0b454090fcd5bb18 276 PRINTS PR00050 Cold shock protein signature 246 264 1.6E-9 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS08170 f7187c40b5edcc6e0b454090fcd5bb18 276 Gene3D G3DSA:2.40.50.140 99 174 1.1E-17 T 28-03-2018 CJD35_RS08170 f7187c40b5edcc6e0b454090fcd5bb18 276 Gene3D G3DSA:2.40.50.140 195 275 8.0E-22 T 28-03-2018 CJD35_RS08170 f7187c40b5edcc6e0b454090fcd5bb18 276 SMART SM00357 209 274 2.9E-17 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CJD35_RS08170 f7187c40b5edcc6e0b454090fcd5bb18 276 SMART SM00357 105 169 1.6E-16 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CJD35_RS08170 f7187c40b5edcc6e0b454090fcd5bb18 276 SUPERFAMILY SSF50249 105 167 8.36E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS08170 f7187c40b5edcc6e0b454090fcd5bb18 276 Pfam PF00313 'Cold-shock' DNA-binding domain 105 166 7.2E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS08170 f7187c40b5edcc6e0b454090fcd5bb18 276 Pfam PF00313 'Cold-shock' DNA-binding domain 209 270 8.7E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 Gene3D G3DSA:3.40.50.970 1 314 1.1E-81 T 28-03-2018 CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 13 286 1.2E-114 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 Pfam PF02779 Transketolase, pyrimidine binding domain 323 484 5.7E-40 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 19 631 3.7E-234 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 Gene3D G3DSA:3.40.50.970 315 488 1.9E-41 T 28-03-2018 CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 12 632 43.716 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 Pfam PF02780 Transketolase, C-terminal domain 500 623 1.5E-24 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 SMART SM00861 323 488 6.2E-66 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 SUPERFAMILY SSF52922 496 631 2.36E-30 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 SUPERFAMILY SSF52518 321 509 9.92E-60 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 SUPERFAMILY SSF52518 10 201 1.61E-77 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 SUPERFAMILY SSF52518 246 385 1.61E-77 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS00910 76e8687fd9a0035736e961c3fd5974a2 642 Gene3D G3DSA:3.40.50.920 500 633 1.5E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS15430 39c51c36098b0e39da9fadf9c670bea6 429 Gene3D G3DSA:3.40.50.300 81 402 2.7E-29 T 28-03-2018 CJD35_RS15430 39c51c36098b0e39da9fadf9c670bea6 429 SUPERFAMILY SSF52540 113 200 4.5E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15430 39c51c36098b0e39da9fadf9c670bea6 429 SUPERFAMILY SSF52540 249 396 4.5E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15430 39c51c36098b0e39da9fadf9c670bea6 429 Pfam PF13469 Sulfotransferase family 125 375 3.2E-39 T 28-03-2018 CJD35_RS11585 ee0c0c38d6eb207f1b1ad832af2eb6be 528 SMART SM00857 3 148 1.5E-30 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS11585 ee0c0c38d6eb207f1b1ad832af2eb6be 528 Pfam PF07508 Recombinase 177 293 2.1E-22 T 28-03-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 CJD35_RS11585 ee0c0c38d6eb207f1b1ad832af2eb6be 528 Gene3D G3DSA:3.40.50.1390 1 155 5.7E-28 T 28-03-2018 CJD35_RS11585 ee0c0c38d6eb207f1b1ad832af2eb6be 528 Pfam PF00239 Resolvase, N terminal domain 4 147 9.8E-23 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS11585 ee0c0c38d6eb207f1b1ad832af2eb6be 528 Pfam PF13408 Recombinase zinc beta ribbon domain 307 359 6.3E-6 T 28-03-2018 IPR025827 Recombinase zinc beta ribbon domain CJD35_RS11585 ee0c0c38d6eb207f1b1ad832af2eb6be 528 SUPERFAMILY SSF53041 1 147 1.83E-23 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS11585 ee0c0c38d6eb207f1b1ad832af2eb6be 528 Gene3D G3DSA:1.20.120.330 378 523 6.3E-5 T 28-03-2018 CJD35_RS17795 f9df96e2185f552eab76929b0fb5df34 368 SUPERFAMILY SSF52317 139 361 9.38E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS17795 f9df96e2185f552eab76929b0fb5df34 368 Gene3D G3DSA:3.40.50.880 144 366 2.3E-46 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS17795 f9df96e2185f552eab76929b0fb5df34 368 Pfam PF06283 Trehalose utilisation 138 357 4.8E-50 T 28-03-2018 IPR029010 ThuA-like domain CJD35_RS06710 17bbe9a7de3f94a1c8d20f3a561754f9 269 Pfam PF02673 Bacitracin resistance protein BacA 9 260 1.8E-84 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CJD35_RS06710 17bbe9a7de3f94a1c8d20f3a561754f9 269 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 3 266 18.116 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CJD35_RS06710 17bbe9a7de3f94a1c8d20f3a561754f9 269 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 8 258 5.2E-70 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CJD35_RS15350 dda78f711944553671ab2bcb9502461c 282 SUPERFAMILY SSF51735 4 161 1.42E-27 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15350 dda78f711944553671ab2bcb9502461c 282 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 163 267 4.3E-13 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CJD35_RS15350 dda78f711944553671ab2bcb9502461c 282 Gene3D G3DSA:3.40.50.720 1 161 6.8E-22 T 28-03-2018 CJD35_RS15350 dda78f711944553671ab2bcb9502461c 282 SUPERFAMILY SSF48179 161 271 1.93E-15 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS15350 dda78f711944553671ab2bcb9502461c 282 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 160 4.0E-24 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CJD35_RS15350 dda78f711944553671ab2bcb9502461c 282 PIRSF PIRSF000103 1 281 9.7E-45 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CJD35_RS15350 dda78f711944553671ab2bcb9502461c 282 Gene3D G3DSA:1.10.1040.10 162 277 5.1E-13 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS14375 f0c1449d5c85645c1aeae79c4faff389 234 Gene3D G3DSA:2.30.30.100 187 233 1.7E-8 T 28-03-2018 CJD35_RS14375 f0c1449d5c85645c1aeae79c4faff389 234 SUPERFAMILY SSF50037 192 233 6.41E-6 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal CJD35_RS14375 f0c1449d5c85645c1aeae79c4faff389 234 Pfam PF02237 Biotin protein ligase C terminal domain 197 233 7.2E-6 T 28-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CJD35_RS14375 f0c1449d5c85645c1aeae79c4faff389 234 Gene3D G3DSA:3.30.930.10 1 186 8.8E-55 T 28-03-2018 CJD35_RS14375 f0c1449d5c85645c1aeae79c4faff389 234 Pfam PF03099 Biotin/lipoate A/B protein ligase family 33 125 9.3E-12 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CJD35_RS14375 f0c1449d5c85645c1aeae79c4faff389 234 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 3 232 5.3E-41 T 28-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CJD35_RS14375 f0c1449d5c85645c1aeae79c4faff389 234 SUPERFAMILY SSF55681 3 181 1.14E-45 T 28-03-2018 CJD35_RS15250 fddd193f708d187efdf1a233ada1f91e 536 Pfam PF13450 NAD(P)-binding Rossmann-like domain 66 133 4.9E-9 T 28-03-2018 CJD35_RS15250 fddd193f708d187efdf1a233ada1f91e 536 Gene3D G3DSA:3.40.50.720 51 160 0.0024 T 28-03-2018 CJD35_RS15250 fddd193f708d187efdf1a233ada1f91e 536 SUPERFAMILY SSF51905 483 526 1.29E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15250 fddd193f708d187efdf1a233ada1f91e 536 SUPERFAMILY SSF51905 65 380 1.29E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15250 fddd193f708d187efdf1a233ada1f91e 536 Gene3D G3DSA:1.10.405.10 181 278 3.3E-25 T 28-03-2018 CJD35_RS13420 ace2596d195b3945486ac7090ea5628b 433 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 208 432 5.4E-77 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS13420 ace2596d195b3945486ac7090ea5628b 433 Gene3D G3DSA:4.10.320.10 126 178 2.9E-16 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS13420 ace2596d195b3945486ac7090ea5628b 433 Gene3D G3DSA:3.30.559.10 183 433 4.7E-86 T 28-03-2018 CJD35_RS13420 ace2596d195b3945486ac7090ea5628b 433 Pfam PF02817 e3 binding domain 131 165 1.0E-13 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS13420 ace2596d195b3945486ac7090ea5628b 433 Pfam PF00364 Biotin-requiring enzyme 3 77 1.3E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS13420 ace2596d195b3945486ac7090ea5628b 433 Gene3D G3DSA:2.40.50.100 2 81 4.1E-21 T 28-03-2018 CJD35_RS13420 ace2596d195b3945486ac7090ea5628b 433 SUPERFAMILY SSF51230 2 95 5.37E-30 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS13420 ace2596d195b3945486ac7090ea5628b 433 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CJD35_RS13420 ace2596d195b3945486ac7090ea5628b 433 SUPERFAMILY SSF47005 124 168 3.53E-11 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS13420 ace2596d195b3945486ac7090ea5628b 433 SUPERFAMILY SSF52777 207 432 5.78E-77 T 28-03-2018 CJD35_RS13420 ace2596d195b3945486ac7090ea5628b 433 TIGRFAM TIGR01349 PDHac_trf_mito: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 5 432 1.3E-154 T 28-03-2018 IPR006257 Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex GO:0004742|GO:0006090|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 CJD35_RS17895 abcf185cb6ca8838729c8ccde1519402 260 Gene3D G3DSA:3.40.630.40 17 260 2.4E-57 T 28-03-2018 CJD35_RS17895 abcf185cb6ca8838729c8ccde1519402 260 PIRSF PIRSF029730 7 259 9.9E-82 T 28-03-2018 IPR011227 Uncharacterised conserved protein UCP029730 CJD35_RS17895 abcf185cb6ca8838729c8ccde1519402 260 SUPERFAMILY SSF53187 12 255 3.77E-63 T 28-03-2018 CJD35_RS17895 abcf185cb6ca8838729c8ccde1519402 260 Pfam PF05013 N-formylglutamate amidohydrolase 27 234 1.6E-38 T 28-03-2018 IPR007709 N-formylglutamate amidohydrolase CJD35_RS00955 873e3998f2344ee047b14af3573e8539 228 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 227 2.8E-105 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CJD35_RS00955 873e3998f2344ee047b14af3573e8539 228 PIRSF PIRSF000709 2 105 2.9E-4 T 28-03-2018 CJD35_RS00955 873e3998f2344ee047b14af3573e8539 228 PIRSF PIRSF000709 129 227 0.038 T 28-03-2018 CJD35_RS00955 873e3998f2344ee047b14af3573e8539 228 SUPERFAMILY SSF53254 1 221 2.36E-69 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CJD35_RS00955 873e3998f2344ee047b14af3573e8539 228 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 225 43.602 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CJD35_RS00955 873e3998f2344ee047b14af3573e8539 228 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CJD35_RS00955 873e3998f2344ee047b14af3573e8539 228 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 129 9.8E-27 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CJD35_RS00955 873e3998f2344ee047b14af3573e8539 228 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 136 222 9.3E-7 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CJD35_RS00955 873e3998f2344ee047b14af3573e8539 228 SMART SM00855 3 186 1.5E-22 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CJD35_RS00955 873e3998f2344ee047b14af3573e8539 228 Gene3D G3DSA:3.40.50.1240 1 228 2.7E-59 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CJD35_RS07370 62fff63da23481fd417bf34ad48b1e2f 295 SUPERFAMILY SSF56534 17 285 6.41E-96 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CJD35_RS07370 62fff63da23481fd417bf34ad48b1e2f 295 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 30 246 6.0E-45 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CJD35_RS07370 62fff63da23481fd417bf34ad48b1e2f 295 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 20 266 1.5E-102 T 28-03-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 CJD35_RS07370 62fff63da23481fd417bf34ad48b1e2f 295 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 128 139 - T 28-03-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 CJD35_RS07370 62fff63da23481fd417bf34ad48b1e2f 295 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 222 241 4.0E-10 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CJD35_RS07370 62fff63da23481fd417bf34ad48b1e2f 295 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 190 208 4.0E-10 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CJD35_RS07370 62fff63da23481fd417bf34ad48b1e2f 295 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 85 107 4.0E-10 T 28-03-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 CJD35_RS07370 62fff63da23481fd417bf34ad48b1e2f 295 Gene3D G3DSA:1.10.800.10 13 292 1.8E-95 T 28-03-2018 IPR001273 Aromatic amino acid hydroxylase GO:0004497|GO:0005506|GO:0009072|GO:0055114 CJD35_RS09515 72a462e17bd07ad75613bbb2f3547070 223 SUPERFAMILY SSF47616 84 203 7.29E-13 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS09515 72a462e17bd07ad75613bbb2f3547070 223 Pfam PF13409 Glutathione S-transferase, N-terminal domain 11 79 6.7E-14 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS09515 72a462e17bd07ad75613bbb2f3547070 223 Gene3D G3DSA:1.20.1050.10 97 203 1.5E-15 T 28-03-2018 CJD35_RS09515 72a462e17bd07ad75613bbb2f3547070 223 Gene3D G3DSA:3.40.30.10 1 96 3.1E-21 T 28-03-2018 CJD35_RS09515 72a462e17bd07ad75613bbb2f3547070 223 SUPERFAMILY SSF52833 8 94 1.92E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS00270 a52d0873796b1a867bcd0f1a55d20af9 207 SUPERFAMILY SSF52833 1 83 1.54E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS00270 a52d0873796b1a867bcd0f1a55d20af9 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 129 187 9.5E-6 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CJD35_RS00270 a52d0873796b1a867bcd0f1a55d20af9 207 Pfam PF02798 Glutathione S-transferase, N-terminal domain 1 73 8.2E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS00270 a52d0873796b1a867bcd0f1a55d20af9 207 Gene3D G3DSA:3.40.30.10 1 92 3.0E-26 T 28-03-2018 CJD35_RS00270 a52d0873796b1a867bcd0f1a55d20af9 207 Gene3D G3DSA:1.20.1050.10 93 207 6.8E-18 T 28-03-2018 CJD35_RS00270 a52d0873796b1a867bcd0f1a55d20af9 207 SUPERFAMILY SSF47616 85 194 4.59E-20 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS17770 78cd19c7ede255040bb25c455b5497eb 455 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 350 451 4.9E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS17770 78cd19c7ede255040bb25c455b5497eb 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 5.0E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS17770 78cd19c7ede255040bb25c455b5497eb 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 5.0E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS17770 78cd19c7ede255040bb25c455b5497eb 455 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 5.0E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS17770 78cd19c7ede255040bb25c455b5497eb 455 Gene3D G3DSA:1.10.287.130 241 324 2.3E-7 T 28-03-2018 CJD35_RS17770 78cd19c7ede255040bb25c455b5497eb 455 SMART SM00387 348 455 8.2E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS17770 78cd19c7ede255040bb25c455b5497eb 455 SMART SM00388 251 309 1.9E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS17770 78cd19c7ede255040bb25c455b5497eb 455 SUPERFAMILY SSF47384 237 304 2.94E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS17770 78cd19c7ede255040bb25c455b5497eb 455 Gene3D G3DSA:3.30.565.10 325 455 8.9E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS17770 78cd19c7ede255040bb25c455b5497eb 455 SMART SM00304 198 250 1.9E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJD35_RS17770 78cd19c7ede255040bb25c455b5497eb 455 SUPERFAMILY SSF55874 313 453 6.16E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13640 7f900034f3ac29fa3493cfde6d622479 413 Gene3D G3DSA:3.40.50.300 16 178 3.2E-4 T 28-03-2018 CJD35_RS13640 7f900034f3ac29fa3493cfde6d622479 413 Pfam PF04466 Phage terminase large subunit 23 214 6.5E-33 T 28-03-2018 IPR035412 Phage terminase large subunit, N-terminal CJD35_RS13640 7f900034f3ac29fa3493cfde6d622479 413 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 28 392 9.9E-49 T 28-03-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 CJD35_RS13640 7f900034f3ac29fa3493cfde6d622479 413 Pfam PF17288 Terminase RNAseH like domain 245 386 4.2E-8 T 28-03-2018 IPR035413 Phage terminase large subunit, C-terminal CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 430 3.7E-174 T 28-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 SUPERFAMILY SSF47446 299 431 1.31E-42 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 Gene3D G3DSA:1.10.260.30 328 433 1.5E-32 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 SUPERFAMILY SSF47364 1 94 1.64E-26 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 SUPERFAMILY SSF52540 94 299 2.82E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 Gene3D G3DSA:1.20.120.140 1 92 8.9E-28 T 28-03-2018 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 453 31.774 T 28-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 SMART SM00962 101 297 8.4E-105 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 SMART SM00963 2 87 1.5E-31 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 2.4E-69 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 Gene3D G3DSA:3.40.50.300 100 210 4.6E-14 T 28-03-2018 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 SMART SM00382 100 278 2.9E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 Pfam PF02978 Signal peptide binding domain 328 428 3.6E-29 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 1.9E-18 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CJD35_RS09220 b35984c5ce888b25c890febb6a788459 491 Gene3D G3DSA:1.20.120.140 211 311 1.3E-29 T 28-03-2018 CJD35_RS04860 9bb52bbfc6fe4e22df26ff887295a23d 85 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 9 82 5.6E-21 T 28-03-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system CJD35_RS06210 18cf6c1adf7260cbd6afec7dfe1382ec 318 SMART SM01092 226 314 3.1E-16 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CJD35_RS06210 18cf6c1adf7260cbd6afec7dfe1382ec 318 Gene3D G3DSA:3.30.465.10 135 221 2.0E-15 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJD35_RS06210 18cf6c1adf7260cbd6afec7dfe1382ec 318 Gene3D G3DSA:3.30.465.10 55 133 9.2E-15 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJD35_RS06210 18cf6c1adf7260cbd6afec7dfe1382ec 318 SUPERFAMILY SSF55447 224 312 4.84E-16 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CJD35_RS06210 18cf6c1adf7260cbd6afec7dfe1382ec 318 Gene3D G3DSA:3.30.390.50 224 316 9.1E-12 T 28-03-2018 CJD35_RS06210 18cf6c1adf7260cbd6afec7dfe1382ec 318 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 221 5.9E-52 T 28-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CJD35_RS06210 18cf6c1adf7260cbd6afec7dfe1382ec 318 Gene3D G3DSA:3.30.43.10 1 51 2.1E-20 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CJD35_RS06210 18cf6c1adf7260cbd6afec7dfe1382ec 318 SUPERFAMILY SSF56176 1 220 4.85E-60 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJD35_RS05640 88b0641975be41844a8792bae4786151 141 Gene3D G3DSA:1.10.287.110 83 141 6.1E-12 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS05640 88b0641975be41844a8792bae4786151 141 Pfam PF00226 DnaJ domain 90 134 1.0E-6 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS05640 88b0641975be41844a8792bae4786151 141 SUPERFAMILY SSF46565 82 137 1.83E-14 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS05640 88b0641975be41844a8792bae4786151 141 SMART SM00271 85 139 3.7E-7 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS08950 6c4c8c164dad79fff8d505cc09437e11 303 Gene3D G3DSA:3.40.50.620 3 302 1.0E-40 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS08950 6c4c8c164dad79fff8d505cc09437e11 303 SUPERFAMILY SSF52402 7 210 1.53E-69 T 28-03-2018 CJD35_RS08950 6c4c8c164dad79fff8d505cc09437e11 303 PIRSF PIRSF002936 1 303 4.0E-149 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CJD35_RS08950 6c4c8c164dad79fff8d505cc09437e11 303 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 257 1.0E-59 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CJD35_RS08950 6c4c8c164dad79fff8d505cc09437e11 303 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 10 303 1.8E-147 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CJD35_RS08950 6c4c8c164dad79fff8d505cc09437e11 303 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 5 303 54.385 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CJD35_RS01210 c6e4d1cd75dd1155c7b435d0e6d0714b 261 Gene3D G3DSA:1.25.40.10 68 171 1.2E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01210 c6e4d1cd75dd1155c7b435d0e6d0714b 261 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 13 247 2.2E-87 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD CJD35_RS01210 c6e4d1cd75dd1155c7b435d0e6d0714b 261 SUPERFAMILY SSF48452 41 232 2.22E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01210 c6e4d1cd75dd1155c7b435d0e6d0714b 261 Pfam PF13525 Outer membrane lipoprotein 40 234 6.3E-53 T 28-03-2018 CJD35_RS01210 c6e4d1cd75dd1155c7b435d0e6d0714b 261 Gene3D G3DSA:1.25.40.10 37 67 0.048 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01210 c6e4d1cd75dd1155c7b435d0e6d0714b 261 Gene3D G3DSA:1.25.40.10 172 257 0.0012 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01210 c6e4d1cd75dd1155c7b435d0e6d0714b 261 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 9 241 34.074 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD CJD35_RS01485 877d5632209aa6559e9a0202d5f31a3a 218 SUPERFAMILY SSF111384 31 179 8.76E-19 T 28-03-2018 IPR024930 Skp domain CJD35_RS01485 877d5632209aa6559e9a0202d5f31a3a 218 Gene3D G3DSA:3.30.910.20 18 179 5.1E-15 T 28-03-2018 CJD35_RS01485 877d5632209aa6559e9a0202d5f31a3a 218 Pfam PF03938 Outer membrane protein (OmpH-like) 17 177 1.9E-18 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CJD35_RS01485 877d5632209aa6559e9a0202d5f31a3a 218 SMART SM00935 15 179 3.5E-19 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CJD35_RS19460 e363740f94264b0f5846f974f468ead5 92 SUPERFAMILY SSF46689 1 77 1.97E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS19460 e363740f94264b0f5846f974f468ead5 92 Gene3D G3DSA:1.10.10.10 38 69 1.4E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19460 e363740f94264b0f5846f974f468ead5 92 Gene3D G3DSA:1.10.10.60 4 37 2.0E-7 T 28-03-2018 CJD35_RS19460 e363740f94264b0f5846f974f468ead5 92 Pfam PF01527 Transposase 2 75 3.0E-17 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CJD35_RS20565 1261b3a87efc7881aaa8b09dfcc7fcc7 140 Pfam PF00376 MerR family regulatory protein 11 45 1.5E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS20565 1261b3a87efc7881aaa8b09dfcc7fcc7 140 Gene3D G3DSA:1.10.1660.10 6 63 5.7E-21 T 28-03-2018 CJD35_RS20565 1261b3a87efc7881aaa8b09dfcc7fcc7 140 Gene3D G3DSA:1.10.1660.10 64 138 1.0E-20 T 28-03-2018 CJD35_RS20565 1261b3a87efc7881aaa8b09dfcc7fcc7 140 SMART SM00422 7 76 5.0E-21 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS20565 1261b3a87efc7881aaa8b09dfcc7fcc7 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 19 32 4.0E-9 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS20565 1261b3a87efc7881aaa8b09dfcc7fcc7 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 8 19 4.0E-9 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS20565 1261b3a87efc7881aaa8b09dfcc7fcc7 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 43 63 4.0E-9 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS20565 1261b3a87efc7881aaa8b09dfcc7fcc7 140 Pfam PF09278 MerR, DNA binding 50 113 5.0E-18 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding CJD35_RS20565 1261b3a87efc7881aaa8b09dfcc7fcc7 140 SUPERFAMILY SSF46955 11 132 1.36E-35 T 28-03-2018 IPR009061 Putative DNA-binding domain CJD35_RS20565 1261b3a87efc7881aaa8b09dfcc7fcc7 140 ProSitePatterns PS00552 MerR-type HTH domain signature. 10 32 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS18605 b0c8a1e8b9cef57e3cb7445262f24609 175 Pfam PF10502 Signal peptidase, peptidase S26 43 174 4.5E-17 T 28-03-2018 IPR019533 Peptidase S26 CJD35_RS18605 b0c8a1e8b9cef57e3cb7445262f24609 175 Gene3D G3DSA:2.10.109.10 23 172 1.2E-7 T 28-03-2018 CJD35_RS18605 b0c8a1e8b9cef57e3cb7445262f24609 175 SUPERFAMILY SSF51306 44 171 1.88E-17 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS01560 6b0f2b58f699f5c3a93cad1dc35dba26 607 SUPERFAMILY SSF56235 2 233 2.57E-74 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS01560 6b0f2b58f699f5c3a93cad1dc35dba26 607 Gene3D G3DSA:3.60.20.10 2 237 1.1E-66 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS01560 6b0f2b58f699f5c3a93cad1dc35dba26 607 Gene3D G3DSA:3.40.50.10490 453 605 5.3E-50 T 28-03-2018 CJD35_RS01560 6b0f2b58f699f5c3a93cad1dc35dba26 607 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 607 2.7E-242 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CJD35_RS01560 6b0f2b58f699f5c3a93cad1dc35dba26 607 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 607 39.288 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CJD35_RS01560 6b0f2b58f699f5c3a93cad1dc35dba26 607 SUPERFAMILY SSF53697 244 607 1.02E-112 T 28-03-2018 CJD35_RS01560 6b0f2b58f699f5c3a93cad1dc35dba26 607 Pfam PF01380 SIS domain 290 413 1.3E-27 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CJD35_RS01560 6b0f2b58f699f5c3a93cad1dc35dba26 607 Pfam PF01380 SIS domain 459 589 7.5E-28 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CJD35_RS01560 6b0f2b58f699f5c3a93cad1dc35dba26 607 Pfam PF13522 Glutamine amidotransferase domain 65 192 1.2E-21 T 28-03-2018 CJD35_RS01560 6b0f2b58f699f5c3a93cad1dc35dba26 607 Gene3D G3DSA:3.40.50.10490 238 452 3.7E-61 T 28-03-2018 CJD35_RS10890 aeb45425dd0730b0e0c60a370e624091 791 Gene3D G3DSA:2.170.130.10 28 172 1.9E-7 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS10890 aeb45425dd0730b0e0c60a370e624091 791 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 155 2.0E-4 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS10890 aeb45425dd0730b0e0c60a370e624091 791 Gene3D G3DSA:2.40.170.20 174 790 1.5E-52 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS10890 aeb45425dd0730b0e0c60a370e624091 791 SUPERFAMILY SSF56935 308 788 3.36E-73 T 28-03-2018 CJD35_RS10890 aeb45425dd0730b0e0c60a370e624091 791 SUPERFAMILY SSF56935 28 278 3.36E-73 T 28-03-2018 CJD35_RS10890 aeb45425dd0730b0e0c60a370e624091 791 Pfam PF00593 TonB dependent receptor 316 788 1.7E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 Gene3D G3DSA:3.30.565.10 1 212 1.5E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 SUPERFAMILY SSF54211 189 325 1.4E-33 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 28-03-2018 IPR014762 DNA mismatch repair, conserved site CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 591 26.684 T 28-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 Gene3D G3DSA:3.30.230.10 213 324 6.2E-25 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 SUPERFAMILY SSF55874 1 208 7.99E-49 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 128 1.1E-9 T 28-03-2018 CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 SMART SM00853 408 551 2.5E-53 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 Pfam PF08676 MutL C terminal dimerisation domain 404 551 4.5E-48 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 SUPERFAMILY SSF118116 403 593 4.71E-60 T 28-03-2018 CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 305 1.4E-88 T 28-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 208 324 9.5E-32 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CJD35_RS12575 2e51d5d77e251f55a1c42109497138e0 594 SMART SM01340 207 325 5.3E-49 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CJD35_RS14640 7eeb6f7e18122cf77167ffdd452b9c74 420 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 10 416 51.099 T 28-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CJD35_RS14640 7eeb6f7e18122cf77167ffdd452b9c74 420 SUPERFAMILY SSF51161 304 404 3.53E-15 T 28-03-2018 IPR011004 Trimeric LpxA-like CJD35_RS14640 7eeb6f7e18122cf77167ffdd452b9c74 420 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 204 214 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CJD35_RS14640 7eeb6f7e18122cf77167ffdd452b9c74 420 Pfam PF00483 Nucleotidyl transferase 16 284 9.0E-64 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CJD35_RS14640 7eeb6f7e18122cf77167ffdd452b9c74 420 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 14 390 4.4E-152 T 28-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CJD35_RS14640 7eeb6f7e18122cf77167ffdd452b9c74 420 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 106 114 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CJD35_RS14640 7eeb6f7e18122cf77167ffdd452b9c74 420 Gene3D G3DSA:2.160.10.10 305 396 5.3E-6 T 28-03-2018 CJD35_RS14640 7eeb6f7e18122cf77167ffdd452b9c74 420 SUPERFAMILY SSF53448 354 370 3.52E-77 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS14640 7eeb6f7e18122cf77167ffdd452b9c74 420 SUPERFAMILY SSF53448 15 287 3.52E-77 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS14640 7eeb6f7e18122cf77167ffdd452b9c74 420 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 19 38 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CJD35_RS14640 7eeb6f7e18122cf77167ffdd452b9c74 420 Gene3D G3DSA:3.90.550.10 2 293 4.9E-59 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS11865 16bc4df9beadb1748048380c655b9654 652 Pfam PF00326 Prolyl oligopeptidase family 446 649 2.1E-39 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CJD35_RS11865 16bc4df9beadb1748048380c655b9654 652 SUPERFAMILY SSF53474 342 647 4.24E-60 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS11865 16bc4df9beadb1748048380c655b9654 652 Gene3D G3DSA:2.130.10.120 9 384 1.4E-13 T 28-03-2018 CJD35_RS11865 16bc4df9beadb1748048380c655b9654 652 SUPERFAMILY SSF82171 32 78 3.01E-9 T 28-03-2018 CJD35_RS11865 16bc4df9beadb1748048380c655b9654 652 SUPERFAMILY SSF82171 113 402 3.01E-9 T 28-03-2018 CJD35_RS11865 16bc4df9beadb1748048380c655b9654 652 Gene3D G3DSA:3.40.50.1820 385 650 2.0E-52 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS11610 a0d0d877c34e2e3cfa5c74d72c7faf78 399 PIRSF PIRSF001554 1 398 1.9E-145 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CJD35_RS11610 a0d0d877c34e2e3cfa5c74d72c7faf78 399 SUPERFAMILY SSF52210 251 394 5.36E-51 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CJD35_RS11610 a0d0d877c34e2e3cfa5c74d72c7faf78 399 Pfam PF00549 CoA-ligase 272 391 1.2E-25 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CJD35_RS11610 a0d0d877c34e2e3cfa5c74d72c7faf78 399 Gene3D G3DSA:3.30.1490.20 21 106 2.8E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS11610 a0d0d877c34e2e3cfa5c74d72c7faf78 399 Gene3D G3DSA:3.40.50.261 250 395 2.1E-42 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CJD35_RS11610 a0d0d877c34e2e3cfa5c74d72c7faf78 399 Pfam PF08442 ATP-grasp domain 2 212 1.3E-71 T 28-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CJD35_RS11610 a0d0d877c34e2e3cfa5c74d72c7faf78 399 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 267 291 - T 28-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CJD35_RS11610 a0d0d877c34e2e3cfa5c74d72c7faf78 399 Gene3D G3DSA:3.30.470.20 107 249 1.2E-50 T 28-03-2018 CJD35_RS11610 a0d0d877c34e2e3cfa5c74d72c7faf78 399 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 396 42.48 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CJD35_RS11610 a0d0d877c34e2e3cfa5c74d72c7faf78 399 SUPERFAMILY SSF56059 1 248 3.16E-76 T 28-03-2018 CJD35_RS11610 a0d0d877c34e2e3cfa5c74d72c7faf78 399 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 394 4.8E-153 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CJD35_RS15730 40d43637b057c70433b92097d3598eb2 387 SUPERFAMILY SSF47203 231 381 1.19E-41 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS15730 40d43637b057c70433b92097d3598eb2 387 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 236 381 2.6E-34 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS15730 40d43637b057c70433b92097d3598eb2 387 Gene3D G3DSA:2.40.110.10 123 221 8.4E-33 T 28-03-2018 CJD35_RS15730 40d43637b057c70433b92097d3598eb2 387 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 124 220 2.6E-25 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS15730 40d43637b057c70433b92097d3598eb2 387 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 119 1.8E-24 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15730 40d43637b057c70433b92097d3598eb2 387 Gene3D G3DSA:1.20.140.10 222 385 3.6E-45 T 28-03-2018 CJD35_RS15730 40d43637b057c70433b92097d3598eb2 387 Gene3D G3DSA:1.10.540.10 1 121 1.9E-30 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15730 40d43637b057c70433b92097d3598eb2 387 SUPERFAMILY SSF56645 1 232 2.09E-66 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS15730 40d43637b057c70433b92097d3598eb2 387 PIRSF PIRSF016578 115 381 2.0E-20 T 28-03-2018 CJD35_RS15730 40d43637b057c70433b92097d3598eb2 387 PIRSF PIRSF016578 24 114 0.46 T 28-03-2018 CJD35_RS15730 40d43637b057c70433b92097d3598eb2 387 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 340 359 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CJD35_RS09835 6b254a3c4bf5f5626d2d0c1c130b985b 262 SUPERFAMILY SSF52540 14 249 1.27E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09835 6b254a3c4bf5f5626d2d0c1c130b985b 262 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 15 262 2.6E-121 T 28-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CJD35_RS09835 6b254a3c4bf5f5626d2d0c1c130b985b 262 SMART SM00382 39 243 4.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS09835 6b254a3c4bf5f5626d2d0c1c130b985b 262 Gene3D G3DSA:3.40.50.300 11 260 6.6E-57 T 28-03-2018 CJD35_RS09835 6b254a3c4bf5f5626d2d0c1c130b985b 262 Pfam PF00005 ABC transporter 31 186 7.7E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS09835 6b254a3c4bf5f5626d2d0c1c130b985b 262 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS08130 d3ee94d57904f7358033c10bb55bd50d 376 Pfam PF13480 Acetyltransferase (GNAT) domain 181 300 2.0E-20 T 28-03-2018 CJD35_RS08130 d3ee94d57904f7358033c10bb55bd50d 376 SUPERFAMILY SSF55729 170 300 4.5E-11 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS08130 d3ee94d57904f7358033c10bb55bd50d 376 Gene3D G3DSA:3.40.630.30 128 309 1.4E-12 T 28-03-2018 CJD35_RS12565 6b7c41b0321a61662fe9996f083bd851 304 Pfam PF04085 rod shape-determining protein MreC 136 255 2.1E-26 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CJD35_RS12565 6b7c41b0321a61662fe9996f083bd851 304 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 71 254 2.2E-27 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CJD35_RS12720 0deeec7bbdcd7183d5b1435919d46f5d 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.5E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12720 0deeec7bbdcd7183d5b1435919d46f5d 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 6.5E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12720 0deeec7bbdcd7183d5b1435919d46f5d 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 6.5E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12720 0deeec7bbdcd7183d5b1435919d46f5d 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.5E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12720 0deeec7bbdcd7183d5b1435919d46f5d 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.5E-16 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12720 0deeec7bbdcd7183d5b1435919d46f5d 237 Pfam PF00106 short chain dehydrogenase 10 202 3.4E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12720 0deeec7bbdcd7183d5b1435919d46f5d 237 Gene3D G3DSA:3.40.50.720 1 232 1.5E-43 T 28-03-2018 CJD35_RS12720 0deeec7bbdcd7183d5b1435919d46f5d 237 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 185 0.0028 T 28-03-2018 CJD35_RS12720 0deeec7bbdcd7183d5b1435919d46f5d 237 SUPERFAMILY SSF51735 3 227 4.8E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 SUPERFAMILY SSF54814 180 297 3.4E-37 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 Gene3D G3DSA:3.30.300.20 184 297 9.2E-38 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 Pfam PF07650 KH domain 207 283 3.0E-16 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 8 278 3.0E-73 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 Hamap MF_00367 GTPase Era [era]. 5 295 31.803 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 SUPERFAMILY SSF52540 9 181 7.62E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 Gene3D G3DSA:3.40.50.300 56 174 2.7E-13 T 28-03-2018 CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 Gene3D G3DSA:3.40.50.300 2 55 1.1E-15 T 28-03-2018 CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 Pfam PF01926 50S ribosome-binding GTPase 10 124 8.9E-22 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 161 8.3E-24 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 86 101 5.4E-7 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS12920 de2a139f28a1f11bdf41ca1ebd46b5a6 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 10 30 5.4E-7 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS22250 c8cb33bd79a38ff427f216cac3e24bda 486 Gene3D G3DSA:2.60.120.10 354 465 2.4E-29 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS22250 c8cb33bd79a38ff427f216cac3e24bda 486 Pfam PF01050 Mannose-6-phosphate isomerase 331 481 9.0E-61 T 28-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CJD35_RS22250 c8cb33bd79a38ff427f216cac3e24bda 486 SUPERFAMILY SSF53448 12 293 3.25E-62 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS22250 c8cb33bd79a38ff427f216cac3e24bda 486 Gene3D G3DSA:3.90.550.10 11 353 6.5E-82 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS22250 c8cb33bd79a38ff427f216cac3e24bda 486 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 12 484 1.1E-175 T 28-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CJD35_RS22250 c8cb33bd79a38ff427f216cac3e24bda 486 SUPERFAMILY SSF51182 199 485 2.13E-70 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS22250 c8cb33bd79a38ff427f216cac3e24bda 486 Pfam PF00483 Nucleotidyl transferase 14 297 1.8E-57 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CJD35_RS20770 4914639449c1ccb3d749e8982557b8f4 583 Gene3D G3DSA:2.130.10.10 198 578 2.8E-9 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS20770 4914639449c1ccb3d749e8982557b8f4 583 SUPERFAMILY SSF75011 208 332 2.35E-8 T 28-03-2018 CJD35_RS20770 4914639449c1ccb3d749e8982557b8f4 583 SUPERFAMILY SSF75011 492 570 2.35E-8 T 28-03-2018 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.3E-35 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.3E-35 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.3E-35 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.3E-35 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.3E-35 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 Pfam PF00334 Nucleoside diphosphate kinase 5 138 3.2E-52 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 Gene3D G3DSA:3.30.70.141 1 55 3.6E-15 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 Gene3D G3DSA:3.30.70.141 56 140 1.2E-31 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 SUPERFAMILY SSF54919 1 139 4.06E-53 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 28-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 SMART SM00562 3 140 2.4E-77 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJD35_RS09505 bd8f2f6b6d98508a7888f35b2d7308e5 140 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 33.433 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CJD35_RS12330 a1d5e1bc43c4680fc9938b6c64cf904d 272 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 254 1.2E-72 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CJD35_RS12330 a1d5e1bc43c4680fc9938b6c64cf904d 272 Gene3D G3DSA:3.20.20.70 3 272 6.9E-73 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS12330 a1d5e1bc43c4680fc9938b6c64cf904d 272 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 49 62 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CJD35_RS12330 a1d5e1bc43c4680fc9938b6c64cf904d 272 Pfam PF00290 Tryptophan synthase alpha chain 9 258 1.9E-89 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CJD35_RS12330 a1d5e1bc43c4680fc9938b6c64cf904d 272 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 15 262 33.662 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CJD35_RS12330 a1d5e1bc43c4680fc9938b6c64cf904d 272 SUPERFAMILY SSF51366 2 255 1.22E-85 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Pfam PF13432 Tetratricopeptide repeat 141 201 3.0E-6 T 28-03-2018 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Pfam PF13432 Tetratricopeptide repeat 246 304 5.2E-4 T 28-03-2018 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Pfam PF13432 Tetratricopeptide repeat 437 490 0.0088 T 28-03-2018 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Pfam PF13432 Tetratricopeptide repeat 570 634 3.4E-5 T 28-03-2018 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Gene3D G3DSA:1.25.40.10 154 203 7.9E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Pfam PF14559 Tetratricopeptide repeat 315 380 4.3E-7 T 28-03-2018 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 SMART SM00028 202 235 65.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 SMART SM00028 168 201 31.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 SMART SM00028 134 167 130.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 SMART SM00028 565 598 110.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Gene3D G3DSA:1.25.40.10 550 665 1.6E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Gene3D G3DSA:1.25.40.10 283 399 3.7E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Gene3D G3DSA:1.25.40.10 114 153 0.01 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 SUPERFAMILY SSF48452 138 295 3.2E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Gene3D G3DSA:1.25.40.10 24 113 2.8E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Gene3D G3DSA:1.25.40.10 248 282 0.0098 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 SUPERFAMILY SSF48452 438 557 6.56E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Gene3D G3DSA:1.25.40.10 416 549 5.9E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 SUPERFAMILY SSF48452 260 395 5.69E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 Gene3D G3DSA:1.20.120.420 204 247 0.0018 T 28-03-2018 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 SUPERFAMILY SSF48452 523 653 4.93E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01100 980909719e672973fbc925902f8a3cd2 678 SUPERFAMILY SSF48452 36 164 3.32E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS16200 4b435e998bebb8b218e96a42ce180af5 872 Gene3D G3DSA:3.40.50.300 548 752 5.2E-18 T 28-03-2018 CJD35_RS16200 4b435e998bebb8b218e96a42ce180af5 872 SUPERFAMILY SSF52540 531 585 1.88E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS16200 4b435e998bebb8b218e96a42ce180af5 872 SUPERFAMILY SSF52540 321 473 1.88E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS16200 4b435e998bebb8b218e96a42ce180af5 872 SUPERFAMILY SSF52540 624 708 1.88E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS16200 4b435e998bebb8b218e96a42ce180af5 872 Pfam PF00271 Helicase conserved C-terminal domain 621 700 1.5E-6 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS16200 4b435e998bebb8b218e96a42ce180af5 872 SMART SM00487 303 500 5.0E-19 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS16200 4b435e998bebb8b218e96a42ce180af5 872 SMART SM00490 618 700 2.2E-6 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS16200 4b435e998bebb8b218e96a42ce180af5 872 Gene3D G3DSA:3.40.50.300 101 486 2.0E-28 T 28-03-2018 CJD35_RS16200 4b435e998bebb8b218e96a42ce180af5 872 Pfam PF00270 DEAD/DEAH box helicase 318 471 4.2E-18 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJD35_RS11930 bdf589cc188bb7e10187deb814a92b37 184 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 3 183 1.5E-49 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CJD35_RS11930 bdf589cc188bb7e10187deb814a92b37 184 Pfam PF00692 dUTPase 77 180 5.5E-5 T 28-03-2018 IPR029054 dUTPase-like CJD35_RS11930 bdf589cc188bb7e10187deb814a92b37 184 Gene3D G3DSA:2.70.40.10 1 157 5.2E-56 T 28-03-2018 CJD35_RS11930 bdf589cc188bb7e10187deb814a92b37 184 Hamap MF_00146 dCTP deaminase [dcd]. 2 184 29.228 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CJD35_RS11930 bdf589cc188bb7e10187deb814a92b37 184 SUPERFAMILY SSF51283 3 183 1.28E-51 T 28-03-2018 IPR029054 dUTPase-like CJD35_RS02035 f00c880eace8ff1f0abeb2bc53798cd9 225 SMART SM00198 66 207 2.4E-23 T 28-03-2018 IPR014044 CAP domain CJD35_RS02035 f00c880eace8ff1f0abeb2bc53798cd9 225 Pfam PF00188 Cysteine-rich secretory protein family 73 199 1.4E-17 T 28-03-2018 IPR014044 CAP domain CJD35_RS02035 f00c880eace8ff1f0abeb2bc53798cd9 225 SUPERFAMILY SSF55797 68 210 1.06E-32 T 28-03-2018 IPR014044 CAP domain CJD35_RS02035 f00c880eace8ff1f0abeb2bc53798cd9 225 PRINTS PR00837 Allergen V5/Tpx-1 family signature 168 184 1.3E-11 T 28-03-2018 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related CJD35_RS02035 f00c880eace8ff1f0abeb2bc53798cd9 225 PRINTS PR00837 Allergen V5/Tpx-1 family signature 87 105 1.3E-11 T 28-03-2018 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related CJD35_RS02035 f00c880eace8ff1f0abeb2bc53798cd9 225 PRINTS PR00837 Allergen V5/Tpx-1 family signature 194 207 1.3E-11 T 28-03-2018 IPR001283 Cysteine-rich secretory protein, allergen V5/Tpx-1-related CJD35_RS02035 f00c880eace8ff1f0abeb2bc53798cd9 225 Gene3D G3DSA:3.40.33.10 64 220 2.0E-31 T 28-03-2018 IPR014044 CAP domain CJD35_RS02035 f00c880eace8ff1f0abeb2bc53798cd9 225 ProSitePatterns PS01009 CRISP family signature 1. 169 179 - T 28-03-2018 IPR018244 Allergen V5/Tpx-1-related, conserved site GO:0005576 CJD35_RS19275 1c2215ccf70f7e5308ec05efc9ac9642 306 SUPERFAMILY SSF53448 2 234 8.63E-21 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS19275 1c2215ccf70f7e5308ec05efc9ac9642 306 Gene3D G3DSA:3.90.550.10 2 257 3.0E-22 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS19275 1c2215ccf70f7e5308ec05efc9ac9642 306 Pfam PF00535 Glycosyl transferase family 2 6 124 1.7E-8 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS14495 7fa00714654ecee8a514ba4a365d4803 379 Pfam PF05118 Aspartyl/Asparaginyl beta-hydroxylase 191 350 7.7E-39 T 28-03-2018 IPR007803 Aspartyl/asparaginy/proline hydroxylase GO:0018193 CJD35_RS14495 7fa00714654ecee8a514ba4a365d4803 379 SUPERFAMILY SSF48452 3 101 5.96E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS14495 7fa00714654ecee8a514ba4a365d4803 379 Gene3D G3DSA:2.60.120.330 178 369 4.8E-46 T 28-03-2018 IPR027443 Isopenicillin N synthase-like CJD35_RS14495 7fa00714654ecee8a514ba4a365d4803 379 SUPERFAMILY SSF51197 227 354 4.39E-16 T 28-03-2018 CJD35_RS14495 7fa00714654ecee8a514ba4a365d4803 379 Gene3D G3DSA:1.25.40.10 2 163 3.2E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS14405 5348264502361abda654735a8d4d83ff 161 Pfam PF12838 4Fe-4S dicluster domain 61 115 4.6E-13 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJD35_RS14405 5348264502361abda654735a8d4d83ff 161 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 9 158 28.455 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14405 5348264502361abda654735a8d4d83ff 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 62 73 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJD35_RS14405 5348264502361abda654735a8d4d83ff 161 Gene3D G3DSA:3.30.70.20 72 104 1.3E-14 T 28-03-2018 CJD35_RS14405 5348264502361abda654735a8d4d83ff 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 101 112 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJD35_RS14405 5348264502361abda654735a8d4d83ff 161 Gene3D G3DSA:3.30.70.20 30 71 7.2E-7 T 28-03-2018 CJD35_RS14405 5348264502361abda654735a8d4d83ff 161 Gene3D G3DSA:3.30.70.20 105 156 2.6E-7 T 28-03-2018 CJD35_RS14405 5348264502361abda654735a8d4d83ff 161 SUPERFAMILY SSF54862 35 144 3.77E-28 T 28-03-2018 CJD35_RS14405 5348264502361abda654735a8d4d83ff 161 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 20 139 4.9E-51 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS03285 68e3f5f91fd4d9e88faee25495fed181 252 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 19 199 1.7E-44 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CJD35_RS03285 68e3f5f91fd4d9e88faee25495fed181 252 Gene3D G3DSA:3.40.225.10 4 252 7.2E-74 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CJD35_RS03285 68e3f5f91fd4d9e88faee25495fed181 252 SMART SM01007 19 199 1.0E-57 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CJD35_RS03285 68e3f5f91fd4d9e88faee25495fed181 252 SUPERFAMILY SSF53639 10 220 1.79E-59 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CJD35_RS08475 7cba692fcc1708a448398a7b590532df 221 SUPERFAMILY SSF52540 14 201 3.54E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08475 7cba692fcc1708a448398a7b590532df 221 Gene3D G3DSA:3.30.63.10 61 94 2.8E-24 T 28-03-2018 CJD35_RS08475 7cba692fcc1708a448398a7b590532df 221 ProSitePatterns PS00856 Guanylate kinase-like signature. 50 67 - T 28-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CJD35_RS08475 7cba692fcc1708a448398a7b590532df 221 Gene3D G3DSA:3.40.50.300 95 198 2.1E-28 T 28-03-2018 CJD35_RS08475 7cba692fcc1708a448398a7b590532df 221 SMART SM00072 15 198 1.1E-60 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CJD35_RS08475 7cba692fcc1708a448398a7b590532df 221 Pfam PF00625 Guanylate kinase 18 196 1.9E-46 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CJD35_RS08475 7cba692fcc1708a448398a7b590532df 221 Gene3D G3DSA:3.40.50.300 12 60 9.8E-6 T 28-03-2018 CJD35_RS08475 7cba692fcc1708a448398a7b590532df 221 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 17 195 1.5E-68 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CJD35_RS08475 7cba692fcc1708a448398a7b590532df 221 Hamap MF_00328 Guanylate kinase [gmk]. 14 198 35.467 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CJD35_RS15550 4890d12d401fe32abe98425da0b7f79c 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 217 5.0E-24 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS15550 4890d12d401fe32abe98425da0b7f79c 385 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CJD35_RS15550 4890d12d401fe32abe98425da0b7f79c 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 8 119 3.1E-25 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15550 4890d12d401fe32abe98425da0b7f79c 385 Gene3D G3DSA:1.20.140.10 217 384 1.1E-52 T 28-03-2018 CJD35_RS15550 4890d12d401fe32abe98425da0b7f79c 385 SUPERFAMILY SSF47203 230 376 2.09E-45 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS15550 4890d12d401fe32abe98425da0b7f79c 385 Gene3D G3DSA:2.40.110.10 119 216 2.7E-35 T 28-03-2018 CJD35_RS15550 4890d12d401fe32abe98425da0b7f79c 385 Gene3D G3DSA:1.10.540.10 1 118 2.2E-28 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15550 4890d12d401fe32abe98425da0b7f79c 385 SUPERFAMILY SSF56645 4 241 2.62E-75 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS15550 4890d12d401fe32abe98425da0b7f79c 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 1.2E-43 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS14175 ba75fc05638e9449d75bf1bf1405adb6 1181 Gene3D G3DSA:2.40.50.140 1007 1144 2.5E-4 T 28-03-2018 CJD35_RS14175 ba75fc05638e9449d75bf1bf1405adb6 1181 Pfam PF14579 Helix-hairpin-helix motif 853 970 3.0E-18 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS14175 ba75fc05638e9449d75bf1bf1405adb6 1181 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 343 779 5.9E-123 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS14175 ba75fc05638e9449d75bf1bf1405adb6 1181 Gene3D G3DSA:3.20.20.140 37 304 3.0E-25 T 28-03-2018 CJD35_RS14175 ba75fc05638e9449d75bf1bf1405adb6 1181 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 37 1181 12.94 T 28-03-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS02270 1f7047e636d53e536f62657a141a7030 282 SMART SM00267 110 275 3.1E-42 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS02270 1f7047e636d53e536f62657a141a7030 282 Pfam PF00990 Diguanylate cyclase, GGDEF domain 121 271 8.7E-37 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS02270 1f7047e636d53e536f62657a141a7030 282 Gene3D G3DSA:3.30.70.270 111 276 8.3E-46 T 28-03-2018 CJD35_RS02270 1f7047e636d53e536f62657a141a7030 282 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 118 272 2.8E-36 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS02270 1f7047e636d53e536f62657a141a7030 282 SUPERFAMILY SSF55073 126 274 8.24E-39 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS12335 22f0ed07bbad63072e1bd9e1f6665bca 413 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 100 114 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CJD35_RS12335 22f0ed07bbad63072e1bd9e1f6665bca 413 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 65 396 1.8E-43 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS12335 22f0ed07bbad63072e1bd9e1f6665bca 413 PIRSF PIRSF001413 5 413 2.3E-161 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CJD35_RS12335 22f0ed07bbad63072e1bd9e1f6665bca 413 Gene3D G3DSA:3.40.50.1100 218 411 4.4E-39 T 28-03-2018 CJD35_RS12335 22f0ed07bbad63072e1bd9e1f6665bca 413 SUPERFAMILY SSF53686 15 407 3.54E-145 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS12335 22f0ed07bbad63072e1bd9e1f6665bca 413 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 19 408 3.4E-190 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CJD35_RS12335 22f0ed07bbad63072e1bd9e1f6665bca 413 Gene3D G3DSA:3.40.50.1100 21 86 2.5E-7 T 28-03-2018 CJD35_RS12335 22f0ed07bbad63072e1bd9e1f6665bca 413 Gene3D G3DSA:3.40.50.1100 87 217 4.6E-38 T 28-03-2018 CJD35_RS12335 22f0ed07bbad63072e1bd9e1f6665bca 413 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 14 409 52.622 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CJD35_RS01935 bdd5b1fe9fba32c7d3175a6015a59f98 608 SUPERFAMILY SSF47203 296 477 1.61E-45 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS01935 bdd5b1fe9fba32c7d3175a6015a59f98 608 Gene3D G3DSA:1.20.140.10 278 476 2.4E-37 T 28-03-2018 CJD35_RS01935 bdd5b1fe9fba32c7d3175a6015a59f98 608 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 290 459 2.8E-16 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS01935 bdd5b1fe9fba32c7d3175a6015a59f98 608 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 171 279 1.7E-16 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS01935 bdd5b1fe9fba32c7d3175a6015a59f98 608 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 88 165 6.3E-9 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS01935 bdd5b1fe9fba32c7d3175a6015a59f98 608 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 479 601 8.1E-34 T 28-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CJD35_RS01935 bdd5b1fe9fba32c7d3175a6015a59f98 608 SUPERFAMILY SSF56645 46 288 8.38E-54 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS01935 bdd5b1fe9fba32c7d3175a6015a59f98 608 Gene3D G3DSA:1.10.540.10 30 164 1.3E-16 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS01935 bdd5b1fe9fba32c7d3175a6015a59f98 608 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 14 42 9.6E-9 T 28-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CJD35_RS01935 bdd5b1fe9fba32c7d3175a6015a59f98 608 Gene3D G3DSA:2.40.110.10 165 277 3.6E-22 T 28-03-2018 CJD35_RS09335 ca09a15475abac70da40a491befd42a1 368 Gene3D G3DSA:3.30.565.10 144 359 1.2E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS09335 ca09a15475abac70da40a491befd42a1 368 SMART SM00387 253 360 5.6E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS09335 ca09a15475abac70da40a491befd42a1 368 Pfam PF06580 Histidine kinase 162 242 1.1E-25 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CJD35_RS09335 ca09a15475abac70da40a491befd42a1 368 SUPERFAMILY SSF55874 219 358 5.24E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS09335 ca09a15475abac70da40a491befd42a1 368 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 261 358 2.3E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS07590 72ec2a9bb5125c16ce0d0a80594b75d0 206 Pfam PF00034 Cytochrome c 67 165 8.1E-7 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS07590 72ec2a9bb5125c16ce0d0a80594b75d0 206 PRINTS PR00604 Class IA and IB cytochrome C signature 139 149 1.5E-13 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS07590 72ec2a9bb5125c16ce0d0a80594b75d0 206 PRINTS PR00604 Class IA and IB cytochrome C signature 76 83 1.5E-13 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS07590 72ec2a9bb5125c16ce0d0a80594b75d0 206 PRINTS PR00604 Class IA and IB cytochrome C signature 89 104 1.5E-13 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS07590 72ec2a9bb5125c16ce0d0a80594b75d0 206 PRINTS PR00604 Class IA and IB cytochrome C signature 120 136 1.5E-13 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS07590 72ec2a9bb5125c16ce0d0a80594b75d0 206 PRINTS PR00604 Class IA and IB cytochrome C signature 156 164 1.5E-13 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS07590 72ec2a9bb5125c16ce0d0a80594b75d0 206 SUPERFAMILY SSF46626 64 166 1.4E-28 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS07590 72ec2a9bb5125c16ce0d0a80594b75d0 206 Gene3D G3DSA:1.10.760.10 35 166 6.4E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS07795 8c8f8dfe34c49dfb93af5f52d107822b 328 Pfam PF02445 Quinolinate synthetase A protein 16 314 1.0E-114 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CJD35_RS07795 8c8f8dfe34c49dfb93af5f52d107822b 328 SUPERFAMILY SSF142754 12 315 2.88E-115 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CJD35_RS07795 8c8f8dfe34c49dfb93af5f52d107822b 328 Hamap MF_00568 Quinolinate synthase A [nadA]. 11 315 43.062 T 28-03-2018 IPR023066 Quinolinate synthase A, type 2 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CJD35_RS07795 8c8f8dfe34c49dfb93af5f52d107822b 328 Gene3D G3DSA:3.40.50.10800 13 90 3.1E-20 T 28-03-2018 CJD35_RS07795 8c8f8dfe34c49dfb93af5f52d107822b 328 Gene3D G3DSA:3.40.50.10800 95 187 5.8E-21 T 28-03-2018 CJD35_RS07795 8c8f8dfe34c49dfb93af5f52d107822b 328 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 12 316 5.0E-112 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CJD35_RS07795 8c8f8dfe34c49dfb93af5f52d107822b 328 Gene3D G3DSA:3.40.50.10800 188 297 5.3E-33 T 28-03-2018 CJD35_RS20780 c2e10530c7b923e1153c0aff22b5c386 268 SUPERFAMILY SSF51735 10 254 4.78E-68 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS20780 c2e10530c7b923e1153c0aff22b5c386 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 252 5.4E-51 T 28-03-2018 CJD35_RS20780 c2e10530c7b923e1153c0aff22b5c386 268 Gene3D G3DSA:3.40.50.10090 4 51 5.7E-8 T 28-03-2018 CJD35_RS20780 c2e10530c7b923e1153c0aff22b5c386 268 Gene3D G3DSA:3.40.50.720 52 264 3.6E-51 T 28-03-2018 CJD35_RS20780 c2e10530c7b923e1153c0aff22b5c386 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 2.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20780 c2e10530c7b923e1153c0aff22b5c386 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 2.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20780 c2e10530c7b923e1153c0aff22b5c386 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20780 c2e10530c7b923e1153c0aff22b5c386 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20780 c2e10530c7b923e1153c0aff22b5c386 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.1E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS11940 641423e9f4fe2e8f371c13f226e18dc1 222 SUPERFAMILY SSF51445 32 220 2.32E-34 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CJD35_RS11940 641423e9f4fe2e8f371c13f226e18dc1 222 Gene3D G3DSA:3.20.20.80 22 222 6.6E-31 T 28-03-2018 CJD35_RS11940 641423e9f4fe2e8f371c13f226e18dc1 222 Pfam PF01183 Glycosyl hydrolases family 25 40 207 9.1E-16 T 28-03-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 Pfam PF08447 PAS fold 205 288 3.0E-20 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 SUPERFAMILY SSF55785 186 297 1.06E-26 T 28-03-2018 IPR000014 PAS domain CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 SMART SM00086 253 295 1.5E-10 T 28-03-2018 IPR001610 PAC motif CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 SMART SM00091 181 247 0.0068 T 28-03-2018 IPR000014 PAS domain CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 SUPERFAMILY SSF55781 28 163 5.89E-24 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 Pfam PF07536 HWE histidine kinase 308 397 1.8E-13 T 28-03-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 178 301 2.3E-15 T 28-03-2018 IPR000014 PAS domain CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 Pfam PF01590 GAF domain 7 156 1.6E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 Gene3D G3DSA:3.30.565.10 373 505 5.2E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 Gene3D G3DSA:3.30.450.20 163 318 1.7E-35 T 28-03-2018 CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 Gene3D G3DSA:3.30.450.40 26 162 3.4E-20 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS02235 ea78ddef9db4f1ee7373ace55193942d 508 SMART SM00911 308 398 1.2E-21 T 28-03-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 CJD35_RS12380 a4e0be2da25e3941a7dacc6e1cdf0bdb 575 Gene3D G3DSA:1.10.287.130 343 409 7.7E-8 T 28-03-2018 CJD35_RS12380 a4e0be2da25e3941a7dacc6e1cdf0bdb 575 Gene3D G3DSA:3.30.565.10 420 558 1.5E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS12380 a4e0be2da25e3941a7dacc6e1cdf0bdb 575 Pfam PF00512 His Kinase A (phospho-acceptor) domain 350 407 1.5E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS12380 a4e0be2da25e3941a7dacc6e1cdf0bdb 575 SMART SM00388 345 413 9.8E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS12380 a4e0be2da25e3941a7dacc6e1cdf0bdb 575 SUPERFAMILY SSF47384 351 413 5.69E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS13085 8507c6dcad53246e5ea6e334f751be1a 193 Gene3D G3DSA:3.40.1740.10 129 185 3.3E-9 T 28-03-2018 CJD35_RS13085 8507c6dcad53246e5ea6e334f751be1a 193 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 12 193 30.815 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 CJD35_RS13085 8507c6dcad53246e5ea6e334f751be1a 193 Gene3D G3DSA:3.30.70.1300 55 128 8.4E-23 T 28-03-2018 CJD35_RS13085 8507c6dcad53246e5ea6e334f751be1a 193 Pfam PF02622 Uncharacterized ACR, COG1678 23 178 6.6E-38 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 CJD35_RS13085 8507c6dcad53246e5ea6e334f751be1a 193 SUPERFAMILY SSF143456 14 192 3.66E-52 T 28-03-2018 CJD35_RS01285 cd6856da4f2361f1af8a7e12993f3f1a 118 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 70 5.6E-19 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CJD35_RS01285 cd6856da4f2361f1af8a7e12993f3f1a 118 PRINTS PR01651 Protein-export SecG membrane protein signature 51 73 1.2E-9 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CJD35_RS01285 cd6856da4f2361f1af8a7e12993f3f1a 118 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.2E-9 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CJD35_RS01285 cd6856da4f2361f1af8a7e12993f3f1a 118 Pfam PF03840 Preprotein translocase SecG subunit 4 70 4.0E-18 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CJD35_RS12275 ad224d7df678304b19a105b0c565e4d1 131 SUPERFAMILY SSF51316 2 130 5.23E-45 T 28-03-2018 IPR011057 Mss4-like CJD35_RS12275 ad224d7df678304b19a105b0c565e4d1 131 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 24 108 1.8E-18 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CJD35_RS12275 ad224d7df678304b19a105b0c565e4d1 131 Gene3D G3DSA:3.90.1590.10 1 129 9.4E-41 T 28-03-2018 CJD35_RS15745 5c829e96ea41fcd97477594ea53ccac3 235 Gene3D G3DSA:1.10.357.10 19 222 4.9E-19 T 28-03-2018 CJD35_RS15745 5c829e96ea41fcd97477594ea53ccac3 235 SUPERFAMILY SSF46689 20 94 1.85E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS13525 4d05e50446e77b07485c8c38e7b30d61 212 Pfam PF13392 HNH endonuclease 91 135 1.3E-9 T 28-03-2018 IPR003615 HNH nuclease CJD35_RS13525 4d05e50446e77b07485c8c38e7b30d61 212 Gene3D G3DSA:3.90.75.10 61 194 1.3E-9 T 28-03-2018 CJD35_RS13525 4d05e50446e77b07485c8c38e7b30d61 212 SUPERFAMILY SSF54060 33 142 1.71E-19 T 28-03-2018 CJD35_RS13525 4d05e50446e77b07485c8c38e7b30d61 212 Pfam PF07463 NUMOD4 motif 32 81 1.9E-5 T 28-03-2018 IPR010902 NUMOD4 GO:0016788 CJD35_RS12890 9dc1c0ad033aa67727ce07579b42ddb0 267 Pfam PF01177 Asp/Glu/Hydantoin racemase 14 221 1.4E-19 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS12890 9dc1c0ad033aa67727ce07579b42ddb0 267 Gene3D G3DSA:3.40.50.1860 125 263 1.3E-20 T 28-03-2018 CJD35_RS12890 9dc1c0ad033aa67727ce07579b42ddb0 267 Gene3D G3DSA:3.40.50.1860 5 124 4.2E-23 T 28-03-2018 CJD35_RS12890 9dc1c0ad033aa67727ce07579b42ddb0 267 SUPERFAMILY SSF53681 113 264 2.14E-22 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS12890 9dc1c0ad033aa67727ce07579b42ddb0 267 TIGRFAM TIGR00067 glut_race: glutamate racemase 9 224 1.7E-50 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS12890 9dc1c0ad033aa67727ce07579b42ddb0 267 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 74 82 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS12890 9dc1c0ad033aa67727ce07579b42ddb0 267 SUPERFAMILY SSF53681 8 110 3.66E-28 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS12890 9dc1c0ad033aa67727ce07579b42ddb0 267 Hamap MF_00258 Glutamate racemase [murI]. 7 260 28.63 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS17745 680dafe1a805e6c3c6f17bba01dd980b 252 SUPERFAMILY SSF54427 18 193 2.48E-22 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS17745 680dafe1a805e6c3c6f17bba01dd980b 252 Gene3D G3DSA:3.10.450.50 1 175 4.2E-23 T 28-03-2018 CJD35_RS17745 680dafe1a805e6c3c6f17bba01dd980b 252 Pfam PF13577 SnoaL-like domain 22 165 1.6E-32 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS04950 56a9e7bb7e7e804425ec6d67c4662517 293 Gene3D G3DSA:1.25.40.10 20 124 0.0014 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS04950 56a9e7bb7e7e804425ec6d67c4662517 293 SUPERFAMILY SSF48452 66 159 6.45E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS04950 56a9e7bb7e7e804425ec6d67c4662517 293 Pfam PF14559 Tetratricopeptide repeat 140 209 1.0E-6 T 28-03-2018 CJD35_RS04950 56a9e7bb7e7e804425ec6d67c4662517 293 SMART SM00028 168 201 40.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS04950 56a9e7bb7e7e804425ec6d67c4662517 293 SMART SM00028 90 123 28.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS04950 56a9e7bb7e7e804425ec6d67c4662517 293 SMART SM00028 202 235 96.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS04950 56a9e7bb7e7e804425ec6d67c4662517 293 SMART SM00028 130 163 26.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS04950 56a9e7bb7e7e804425ec6d67c4662517 293 Gene3D G3DSA:1.25.40.10 125 222 1.2E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS04950 56a9e7bb7e7e804425ec6d67c4662517 293 Gene3D G3DSA:1.25.40.10 223 288 1.9E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS04950 56a9e7bb7e7e804425ec6d67c4662517 293 SUPERFAMILY SSF48452 129 269 1.86E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS17875 bd868f7147778b0d05809831da555069 727 SUPERFAMILY SSF56003 34 233 8.02E-39 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17875 bd868f7147778b0d05809831da555069 727 Gene3D G3DSA:3.30.365.10 422 585 1.9E-24 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17875 bd868f7147778b0d05809831da555069 727 Gene3D G3DSA:3.30.365.10 28 179 4.7E-38 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17875 bd868f7147778b0d05809831da555069 727 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 312 581 3.1E-40 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17875 bd868f7147778b0d05809831da555069 727 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 42 167 4.0E-13 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17875 bd868f7147778b0d05809831da555069 727 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 583 676 3.4E-10 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17875 bd868f7147778b0d05809831da555069 727 SUPERFAMILY SSF56003 314 726 1.07E-98 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17875 bd868f7147778b0d05809831da555069 727 PIRSF PIRSF036389 1 727 4.7E-209 T 28-03-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CJD35_RS17875 bd868f7147778b0d05809831da555069 727 SMART SM01008 202 289 8.1E-19 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS17875 bd868f7147778b0d05809831da555069 727 Gene3D G3DSA:3.30.365.10 586 727 4.5E-29 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17875 bd868f7147778b0d05809831da555069 727 Gene3D G3DSA:3.30.365.10 327 421 1.8E-31 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17875 bd868f7147778b0d05809831da555069 727 Gene3D G3DSA:3.90.1170.50 180 326 1.9E-31 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS06915 b5d14d40d276790063564701d9ef7a91 205 Gene3D G3DSA:1.10.10.60 1 70 2.0E-18 T 28-03-2018 CJD35_RS06915 b5d14d40d276790063564701d9ef7a91 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 8.9E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS06915 b5d14d40d276790063564701d9ef7a91 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 8.9E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS06915 b5d14d40d276790063564701d9ef7a91 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 34 65 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJD35_RS06915 b5d14d40d276790063564701d9ef7a91 205 SUPERFAMILY SSF46689 13 80 7.98E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS06915 b5d14d40d276790063564701d9ef7a91 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 68 6.1E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS06915 b5d14d40d276790063564701d9ef7a91 205 SUPERFAMILY SSF48498 88 201 1.05E-21 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS06915 b5d14d40d276790063564701d9ef7a91 205 Gene3D G3DSA:1.10.357.10 71 203 6.7E-22 T 28-03-2018 CJD35_RS19445 b3cc413e5ebe2ea34265a6278f164d5d 394 Pfam PF00561 alpha/beta hydrolase fold 71 143 7.1E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS19445 b3cc413e5ebe2ea34265a6278f164d5d 394 Gene3D G3DSA:3.40.50.1820 23 393 1.6E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS19445 b3cc413e5ebe2ea34265a6278f164d5d 394 SUPERFAMILY SSF53474 18 175 6.13E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS19445 b3cc413e5ebe2ea34265a6278f164d5d 394 SUPERFAMILY SSF53474 325 383 6.13E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS19445 b3cc413e5ebe2ea34265a6278f164d5d 394 SUPERFAMILY SSF53474 206 256 6.13E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS14755 059db719d2e4ec91cc5c15b0fcb21821 556 Gene3D G3DSA:3.20.20.70 9 377 1.3E-108 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS14755 059db719d2e4ec91cc5c15b0fcb21821 556 Pfam PF00682 HMGL-like 33 312 1.7E-74 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CJD35_RS14755 059db719d2e4ec91cc5c15b0fcb21821 556 SUPERFAMILY SSF110921 445 552 1.11E-31 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CJD35_RS14755 059db719d2e4ec91cc5c15b0fcb21821 556 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 242 255 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CJD35_RS14755 059db719d2e4ec91cc5c15b0fcb21821 556 Pfam PF08502 LeuA allosteric (dimerisation) domain 423 552 3.3E-25 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CJD35_RS14755 059db719d2e4ec91cc5c15b0fcb21821 556 SMART SM00917 423 554 2.5E-29 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CJD35_RS14755 059db719d2e4ec91cc5c15b0fcb21821 556 SUPERFAMILY SSF51569 21 329 2.01E-97 T 28-03-2018 CJD35_RS14755 059db719d2e4ec91cc5c15b0fcb21821 556 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 555 52.902 T 28-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CJD35_RS14755 059db719d2e4ec91cc5c15b0fcb21821 556 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 555 1.4E-243 T 28-03-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CJD35_RS14755 059db719d2e4ec91cc5c15b0fcb21821 556 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 39 55 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CJD35_RS14755 059db719d2e4ec91cc5c15b0fcb21821 556 SUPERFAMILY SSF89000 389 438 4.32E-15 T 28-03-2018 CJD35_RS10440 16b63e29a27aca829d9b1d64bec36e52 400 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 31 385 1.0E-101 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CJD35_RS10440 16b63e29a27aca829d9b1d64bec36e52 400 Pfam PF01098 Cell cycle protein 34 384 3.7E-72 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CJD35_RS14255 c72c6d66b1e41b99871aee7e84eaf77f 213 Gene3D G3DSA:2.60.120.620 26 212 1.7E-31 T 28-03-2018 CJD35_RS14255 c72c6d66b1e41b99871aee7e84eaf77f 213 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 105 208 7.7E-14 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CJD35_RS14255 c72c6d66b1e41b99871aee7e84eaf77f 213 SMART SM00702 29 208 6.2E-28 T 28-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CJD35_RS08075 6425c5aef7ec38cd9165fe79c77deb30 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 445 1.0E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS08075 6425c5aef7ec38cd9165fe79c77deb30 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 5.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS08075 6425c5aef7ec38cd9165fe79c77deb30 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 5.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS08075 6425c5aef7ec38cd9165fe79c77deb30 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 5.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS08075 6425c5aef7ec38cd9165fe79c77deb30 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 5.3E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS08075 6425c5aef7ec38cd9165fe79c77deb30 454 SMART SM00387 344 449 4.2E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS08075 6425c5aef7ec38cd9165fe79c77deb30 454 SUPERFAMILY SSF55874 305 445 6.29E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS08075 6425c5aef7ec38cd9165fe79c77deb30 454 Gene3D G3DSA:3.30.565.10 305 451 3.5E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS08075 6425c5aef7ec38cd9165fe79c77deb30 454 SMART SM00304 179 232 8.2E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJD35_RS08075 6425c5aef7ec38cd9165fe79c77deb30 454 Gene3D G3DSA:1.10.287.130 223 293 9.7E-6 T 28-03-2018 CJD35_RS08075 6425c5aef7ec38cd9165fe79c77deb30 454 SUPERFAMILY SSF47384 217 294 4.51E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS02825 04fd6b056b5dda544c73499f5d791558 647 Gene3D G3DSA:1.10.150.130 278 415 1.3E-9 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS02825 04fd6b056b5dda544c73499f5d791558 647 SUPERFAMILY SSF56349 283 608 5.3E-27 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS02825 04fd6b056b5dda544c73499f5d791558 647 Gene3D G3DSA:1.10.443.10 416 611 1.8E-16 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS02825 04fd6b056b5dda544c73499f5d791558 647 Pfam PF00589 Phage integrase family 446 607 6.1E-7 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS13165 4b1906887a3c01ae5cc0c245b7e36784 387 SUPERFAMILY SSF56601 5 280 2.35E-68 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS13165 4b1906887a3c01ae5cc0c245b7e36784 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 55 66 7.5E-15 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CJD35_RS13165 4b1906887a3c01ae5cc0c245b7e36784 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 140 153 7.5E-15 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CJD35_RS13165 4b1906887a3c01ae5cc0c245b7e36784 387 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 113 130 7.5E-15 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CJD35_RS13165 4b1906887a3c01ae5cc0c245b7e36784 387 SUPERFAMILY SSF69189 281 373 3.53E-19 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CJD35_RS13165 4b1906887a3c01ae5cc0c245b7e36784 387 Gene3D G3DSA:3.40.710.10 11 281 2.6E-43 T 28-03-2018 CJD35_RS13165 4b1906887a3c01ae5cc0c245b7e36784 387 SMART SM00936 281 371 1.5E-24 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CJD35_RS13165 4b1906887a3c01ae5cc0c245b7e36784 387 Gene3D G3DSA:2.60.410.10 283 370 2.9E-18 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CJD35_RS13165 4b1906887a3c01ae5cc0c245b7e36784 387 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 370 2.8E-16 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CJD35_RS13165 4b1906887a3c01ae5cc0c245b7e36784 387 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 20 258 1.4E-55 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CJD35_RS04545 f260b0c61ddcf0d6129125f7bf10c618 162 SMART SM00347 26 126 2.0E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS04545 f260b0c61ddcf0d6129125f7bf10c618 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 50 66 5.0E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS04545 f260b0c61ddcf0d6129125f7bf10c618 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 102 5.0E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS04545 f260b0c61ddcf0d6129125f7bf10c618 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 82 5.0E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS04545 f260b0c61ddcf0d6129125f7bf10c618 162 Gene3D G3DSA:1.10.10.10 2 144 2.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS04545 f260b0c61ddcf0d6129125f7bf10c618 162 Pfam PF12802 MarR family 32 90 3.1E-14 T 28-03-2018 CJD35_RS04545 f260b0c61ddcf0d6129125f7bf10c618 162 SUPERFAMILY SSF46785 9 141 6.43E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12770 fd49ac24f1eda8732f20a11d9ebc7f68 155 SUPERFAMILY SSF49764 32 140 8.37E-19 T 28-03-2018 IPR008978 HSP20-like chaperone CJD35_RS12770 fd49ac24f1eda8732f20a11d9ebc7f68 155 Pfam PF00011 Hsp20/alpha crystallin family 44 140 4.1E-16 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CJD35_RS12770 fd49ac24f1eda8732f20a11d9ebc7f68 155 Gene3D G3DSA:2.60.40.790 4 140 2.0E-20 T 28-03-2018 IPR008978 HSP20-like chaperone CJD35_RS07830 b84999dce58a143f16a0e1ea1af8a0ef 534 Gene3D G3DSA:3.40.449.10 21 213 7.3E-75 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CJD35_RS07830 b84999dce58a143f16a0e1ea1af8a0ef 534 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 13 532 53.016 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CJD35_RS07830 b84999dce58a143f16a0e1ea1af8a0ef 534 Gene3D G3DSA:3.90.228.20 214 294 2.2E-29 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CJD35_RS07830 b84999dce58a143f16a0e1ea1af8a0ef 534 Gene3D G3DSA:3.90.228.20 295 529 9.3E-94 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CJD35_RS07830 b84999dce58a143f16a0e1ea1af8a0ef 534 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 484 7.3E-211 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CJD35_RS07830 b84999dce58a143f16a0e1ea1af8a0ef 534 SUPERFAMILY SSF53795 214 529 4.35E-129 T 28-03-2018 CJD35_RS07830 b84999dce58a143f16a0e1ea1af8a0ef 534 PIRSF PIRSF006294 2 531 2.6E-224 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CJD35_RS07830 b84999dce58a143f16a0e1ea1af8a0ef 534 SUPERFAMILY SSF68923 6 213 1.41E-80 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CJD35_RS07830 b84999dce58a143f16a0e1ea1af8a0ef 534 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 21 526 3.7E-203 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CJD35_RS08125 17552d39b8b6684b50543e7cea80f60c 289 SMART SM00558 106 260 0.0027 T 28-03-2018 IPR003347 JmjC domain CJD35_RS08125 17552d39b8b6684b50543e7cea80f60c 289 SUPERFAMILY SSF51197 22 267 1.79E-30 T 28-03-2018 CJD35_RS08125 17552d39b8b6684b50543e7cea80f60c 289 Gene3D G3DSA:2.60.120.650 29 244 1.1E-18 T 28-03-2018 CJD35_RS08125 17552d39b8b6684b50543e7cea80f60c 289 Pfam PF13621 Cupin-like domain 130 185 1.4E-6 T 28-03-2018 CJD35_RS05650 fd40b3d1c9a975d4cee511855275abbf 281 Hamap MF_00158 Pantothenate synthetase [panC]. 2 278 39.382 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CJD35_RS05650 fd40b3d1c9a975d4cee511855275abbf 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 279 5.7E-95 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CJD35_RS05650 fd40b3d1c9a975d4cee511855275abbf 281 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 27 75 1.0E-7 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CJD35_RS05650 fd40b3d1c9a975d4cee511855275abbf 281 Pfam PF02569 Pantoate-beta-alanine ligase 4 276 1.3E-98 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CJD35_RS05650 fd40b3d1c9a975d4cee511855275abbf 281 Gene3D G3DSA:3.30.1300.10 175 281 1.8E-29 T 28-03-2018 CJD35_RS05650 fd40b3d1c9a975d4cee511855275abbf 281 SUPERFAMILY SSF52374 2 278 9.85E-104 T 28-03-2018 CJD35_RS05650 fd40b3d1c9a975d4cee511855275abbf 281 Gene3D G3DSA:3.40.50.620 1 174 9.8E-75 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 SUPERFAMILY SSF55326 401 568 1.24E-55 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 PIRSF PIRSF001587 3 691 1.8E-285 T 28-03-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 Pfam PF00586 AIR synthase related protein, N-terminal domain 87 188 5.1E-23 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 Pfam PF00586 AIR synthase related protein, N-terminal domain 442 562 1.4E-23 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 Gene3D G3DSA:3.90.650.10 179 372 3.5E-40 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 Gene3D G3DSA:3.30.1330.10 44 178 1.9E-46 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 18 686 9.7E-281 T 28-03-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 SUPERFAMILY SSF56042 574 725 1.64E-26 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 SUPERFAMILY SSF55326 13 196 1.94E-51 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 SUPERFAMILY SSF56042 201 427 3.74E-57 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 Gene3D G3DSA:3.90.650.10 570 727 4.6E-25 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 Pfam PF02769 AIR synthase related protein, C-terminal domain 577 687 1.4E-13 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 Pfam PF02769 AIR synthase related protein, C-terminal domain 202 354 1.9E-33 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 Gene3D G3DSA:3.30.1330.10 416 567 1.2E-45 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS01390 723bb00ae9afcd6dabb19e320d7a7a13 729 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 729 321.934 T 28-03-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CJD35_RS04785 20eac10aed0a48497b1c3b9e169ca8f4 279 SUPERFAMILY SSF51261 125 269 1.83E-47 T 28-03-2018 IPR011055 Duplicated hybrid motif CJD35_RS04785 20eac10aed0a48497b1c3b9e169ca8f4 279 Gene3D G3DSA:2.70.70.10 109 272 1.1E-37 T 28-03-2018 CJD35_RS04785 20eac10aed0a48497b1c3b9e169ca8f4 279 Pfam PF01551 Peptidase family M23 172 268 1.2E-29 T 28-03-2018 IPR016047 Peptidase M23 CJD35_RS11595 a3061c73ebe14f18ce8fc392b78e4b0f 398 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 12 390 1.5E-126 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJD35_RS11595 a3061c73ebe14f18ce8fc392b78e4b0f 398 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 9 396 22.345 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJD35_RS11595 a3061c73ebe14f18ce8fc392b78e4b0f 398 Pfam PF06965 Na+/H+ antiporter 1 11 390 6.6E-139 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJD35_RS11595 a3061c73ebe14f18ce8fc392b78e4b0f 398 Gene3D G3DSA:1.20.1530.10 7 396 4.0E-141 T 28-03-2018 IPR023171 Na/H antiporter domain CJD35_RS11920 527c1de83ca1398a8dae85d91e37c543 918 Gene3D G3DSA:2.170.130.10 114 249 5.4E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS11920 527c1de83ca1398a8dae85d91e37c543 918 SUPERFAMILY SSF56935 121 917 1.1E-92 T 28-03-2018 CJD35_RS11920 527c1de83ca1398a8dae85d91e37c543 918 Gene3D G3DSA:2.40.170.20 250 918 3.6E-61 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS11920 527c1de83ca1398a8dae85d91e37c543 918 Pfam PF00593 TonB dependent receptor 367 908 3.3E-45 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS11920 527c1de83ca1398a8dae85d91e37c543 918 Pfam PF07715 TonB-dependent Receptor Plug Domain 135 254 1.5E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS11920 527c1de83ca1398a8dae85d91e37c543 918 SMART SM00965 29 80 0.0053 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CJD35_RS01340 c391da9c54240ff68609f557fcf82935 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CJD35_RS01340 c391da9c54240ff68609f557fcf82935 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 112 7.9E-24 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS01340 c391da9c54240ff68609f557fcf82935 369 SUPERFAMILY SSF50129 318 369 2.82E-12 T 28-03-2018 IPR011032 GroES-like CJD35_RS01340 c391da9c54240ff68609f557fcf82935 369 Gene3D G3DSA:3.90.180.10 1 188 1.7E-55 T 28-03-2018 CJD35_RS01340 c391da9c54240ff68609f557fcf82935 369 SUPERFAMILY SSF51735 160 334 1.61E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS01340 c391da9c54240ff68609f557fcf82935 369 SUPERFAMILY SSF50129 1 183 6.85E-70 T 28-03-2018 IPR011032 GroES-like CJD35_RS01340 c391da9c54240ff68609f557fcf82935 369 Pfam PF00107 Zinc-binding dehydrogenase 197 318 2.2E-21 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS01340 c391da9c54240ff68609f557fcf82935 369 Gene3D G3DSA:3.40.50.720 189 310 1.0E-23 T 28-03-2018 CJD35_RS01340 c391da9c54240ff68609f557fcf82935 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 368 8.6E-187 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 SUPERFAMILY SSF82714 736 826 4.32E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 Gene3D G3DSA:3.30.2090.10 735 828 1.3E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 Gene3D G3DSA:1.20.1640.10 829 1050 4.2E-37 T 28-03-2018 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 PRINTS PR00702 Acriflavin resistance protein family signature 350 373 9.7E-19 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 9.7E-19 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 PRINTS PR00702 Acriflavin resistance protein family signature 491 514 9.7E-19 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 PRINTS PR00702 Acriflavin resistance protein family signature 564 581 9.7E-19 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 PRINTS PR00702 Acriflavin resistance protein family signature 51 69 9.7E-19 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 SUPERFAMILY SSF82693 53 138 3.14E-22 T 28-03-2018 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 SUPERFAMILY SSF82693 579 678 4.45E-6 T 28-03-2018 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 SUPERFAMILY SSF82866 824 1050 3.27E-56 T 28-03-2018 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 SUPERFAMILY SSF82866 320 517 1.09E-31 T 28-03-2018 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 SUPERFAMILY SSF82714 203 285 1.7E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 Gene3D G3DSA:3.30.70.1430 53 154 7.4E-23 T 28-03-2018 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 Gene3D G3DSA:3.30.70.1430 579 680 1.6E-13 T 28-03-2018 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 13 1055 0.0 T 28-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 Pfam PF00873 AcrB/AcrD/AcrF family 18 1047 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 Gene3D G3DSA:1.20.1640.10 307 531 6.3E-35 T 28-03-2018 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 Gene3D G3DSA:3.30.2090.10 201 288 9.5E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 SUPERFAMILY SSF82693 166 202 1.44E-15 T 28-03-2018 CJD35_RS05360 4a7148732dfa260865f052439d7bb2ea 1063 SUPERFAMILY SSF82693 288 344 1.44E-15 T 28-03-2018 CJD35_RS11870 4c5113f04674754ea15d7d7fe3703058 199 SUPERFAMILY SSF52218 1 198 1.97E-60 T 28-03-2018 IPR029039 Flavoprotein-like domain CJD35_RS11870 4c5113f04674754ea15d7d7fe3703058 199 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 197 2.7E-93 T 28-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CJD35_RS11870 4c5113f04674754ea15d7d7fe3703058 199 Gene3D G3DSA:3.40.50.360 2 199 2.2E-45 T 28-03-2018 IPR029039 Flavoprotein-like domain CJD35_RS11870 4c5113f04674754ea15d7d7fe3703058 199 Pfam PF03358 NADPH-dependent FMN reductase 13 124 1.0E-11 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CJD35_RS11870 4c5113f04674754ea15d7d7fe3703058 199 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 199 41.138 T 28-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CJD35_RS05915 0c87da5b909bb5eee7f23ffb148e13e8 183 SMART SM00226 38 176 6.7E-6 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJD35_RS05915 0c87da5b909bb5eee7f23ffb148e13e8 183 Gene3D G3DSA:3.40.50.2300 35 181 2.5E-19 T 28-03-2018 CJD35_RS05915 0c87da5b909bb5eee7f23ffb148e13e8 183 SUPERFAMILY SSF52788 37 175 1.7E-21 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJD35_RS05915 0c87da5b909bb5eee7f23ffb148e13e8 183 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 41 173 7.8E-14 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJD35_RS05915 0c87da5b909bb5eee7f23ffb148e13e8 183 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 108 123 4.7E-6 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CJD35_RS05915 0c87da5b909bb5eee7f23ffb148e13e8 183 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 148 163 4.7E-6 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CJD35_RS05915 0c87da5b909bb5eee7f23ffb148e13e8 183 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 40 57 4.7E-6 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CJD35_RS19455 dd241d1e8b5bd56e7f745df9b0ced95a 232 SUPERFAMILY SSF46785 62 201 3.23E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19455 dd241d1e8b5bd56e7f745df9b0ced95a 232 SMART SM00347 83 183 1.4E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19455 dd241d1e8b5bd56e7f745df9b0ced95a 232 Pfam PF01047 MarR family 94 147 3.4E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19455 dd241d1e8b5bd56e7f745df9b0ced95a 232 Gene3D G3DSA:1.10.10.10 66 213 9.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS08900 03bdf3da4a70ae6d7ad7709b81d077cf 528 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 477 18.877 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CJD35_RS08900 03bdf3da4a70ae6d7ad7709b81d077cf 528 PIRSF PIRSF002869 1 523 1.1E-149 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CJD35_RS08900 03bdf3da4a70ae6d7ad7709b81d077cf 528 PRINTS PR01806 Virulence factor MviN signature 269 295 3.2E-77 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CJD35_RS08900 03bdf3da4a70ae6d7ad7709b81d077cf 528 PRINTS PR01806 Virulence factor MviN signature 165 186 3.2E-77 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CJD35_RS08900 03bdf3da4a70ae6d7ad7709b81d077cf 528 PRINTS PR01806 Virulence factor MviN signature 33 52 3.2E-77 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CJD35_RS08900 03bdf3da4a70ae6d7ad7709b81d077cf 528 PRINTS PR01806 Virulence factor MviN signature 52 68 3.2E-77 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CJD35_RS08900 03bdf3da4a70ae6d7ad7709b81d077cf 528 PRINTS PR01806 Virulence factor MviN signature 141 165 3.2E-77 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CJD35_RS08900 03bdf3da4a70ae6d7ad7709b81d077cf 528 PRINTS PR01806 Virulence factor MviN signature 367 386 3.2E-77 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CJD35_RS08900 03bdf3da4a70ae6d7ad7709b81d077cf 528 PRINTS PR01806 Virulence factor MviN signature 419 436 3.2E-77 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CJD35_RS08900 03bdf3da4a70ae6d7ad7709b81d077cf 528 Pfam PF03023 MviN-like protein 28 485 1.4E-114 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CJD35_RS08900 03bdf3da4a70ae6d7ad7709b81d077cf 528 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 3 517 3.4E-127 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CJD35_RS17460 29a167148390bce42bab85402fc5d9f1 231 Gene3D G3DSA:3.40.50.1000 89 230 9.1E-24 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS17460 29a167148390bce42bab85402fc5d9f1 231 Gene3D G3DSA:1.10.150.240 32 88 1.5E-25 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CJD35_RS17460 29a167148390bce42bab85402fc5d9f1 231 Pfam PF00702 haloacid dehalogenase-like hydrolase 3 188 7.1E-11 T 28-03-2018 CJD35_RS17460 29a167148390bce42bab85402fc5d9f1 231 Gene3D G3DSA:3.40.50.1000 1 31 0.077 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS17460 29a167148390bce42bab85402fc5d9f1 231 SUPERFAMILY SSF56784 3 228 7.44E-31 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS02005 d1790d41e35ae297db1c6ca3968225fc 247 Gene3D G3DSA:3.30.70.980 178 247 4.2E-9 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS02005 d1790d41e35ae297db1c6ca3968225fc 247 Gene3D G3DSA:3.30.70.980 82 177 7.0E-33 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS02005 d1790d41e35ae297db1c6ca3968225fc 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 237 1.1E-92 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS02005 d1790d41e35ae297db1c6ca3968225fc 247 Pfam PF01709 Transcriptional regulator 5 235 4.8E-92 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS02005 d1790d41e35ae297db1c6ca3968225fc 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 34.221 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS02005 d1790d41e35ae297db1c6ca3968225fc 247 SUPERFAMILY SSF75625 3 246 3.14E-91 T 28-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS02005 d1790d41e35ae297db1c6ca3968225fc 247 Gene3D G3DSA:1.10.10.200 1 78 5.9E-31 T 28-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 SMART SM00958 228 345 1.6E-72 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 Pfam PF07516 SecA Wing and Scaffold domain 614 823 2.2E-61 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 SUPERFAMILY SSF52540 404 609 8.42E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 Gene3D G3DSA:3.10.450.50 733 908 1.8E-33 T 28-03-2018 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 Gene3D G3DSA:3.40.50.300 299 403 7.4E-9 T 28-03-2018 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 Gene3D G3DSA:3.40.50.300 9 269 1.9E-55 T 28-03-2018 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 Pfam PF07517 SecA DEAD-like domain 7 388 7.4E-133 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 29 811 0.0 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 SUPERFAMILY SSF81767 227 355 3.79E-45 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 PRINTS PR00906 SecA protein signature 101 115 2.6E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 PRINTS PR00906 SecA protein signature 326 348 2.6E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 PRINTS PR00906 SecA protein signature 400 413 2.6E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 PRINTS PR00906 SecA protein signature 63 87 2.6E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 PRINTS PR00906 SecA protein signature 363 380 2.6E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 PRINTS PR00906 SecA protein signature 117 127 2.6E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 PRINTS PR00906 SecA protein signature 170 190 2.6E-71 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 Gene3D G3DSA:3.40.50.300 404 627 3.3E-50 T 28-03-2018 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 ProSitePatterns PS01312 SecA family signature. 487 502 - T 28-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 Gene3D G3DSA:1.10.3060.10 628 732 4.3E-29 T 28-03-2018 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 SUPERFAMILY SSF52540 7 228 1.52E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 SUPERFAMILY SSF52540 355 402 1.52E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 SMART SM00957 6 389 1.2E-295 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 SUPERFAMILY SSF81886 884 896 7.46E-79 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 SUPERFAMILY SSF81886 614 833 7.46E-79 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 Pfam PF01043 SecA preprotein cross-linking domain 232 345 5.2E-41 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 Pfam PF02810 SEC-C motif 888 905 6.4E-10 T 28-03-2018 IPR004027 SEC-C motif CJD35_RS13140 62d9dcc02946715a0661d712734a01bb 908 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 825 19.825 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CJD35_RS12795 b2f832dfb55501824fdef5dbb9cdad48 175 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 8 170 1.1E-73 T 28-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 CJD35_RS12795 b2f832dfb55501824fdef5dbb9cdad48 175 Pfam PF00994 Probable molybdopterin binding domain 15 156 1.4E-33 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS12795 b2f832dfb55501824fdef5dbb9cdad48 175 SUPERFAMILY SSF53218 7 170 7.2E-46 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS12795 b2f832dfb55501824fdef5dbb9cdad48 175 PIRSF PIRSF006443 1 167 1.6E-59 T 28-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 CJD35_RS12795 b2f832dfb55501824fdef5dbb9cdad48 175 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 151 4.0E-33 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS12795 b2f832dfb55501824fdef5dbb9cdad48 175 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 73 86 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CJD35_RS12795 b2f832dfb55501824fdef5dbb9cdad48 175 SMART SM00852 15 159 1.8E-32 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS12795 b2f832dfb55501824fdef5dbb9cdad48 175 Gene3D G3DSA:3.40.980.10 3 172 2.2E-33 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 201 25.635 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 SUPERFAMILY SSF46929 154 199 6.28E-8 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 SMART SM00278 73 92 85.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 SMART SM00278 108 127 38.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 Pfam PF01330 RuvA N terminal domain 1 60 3.8E-14 T 28-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 Pfam PF14520 Helix-hairpin-helix domain 73 130 1.2E-12 T 28-03-2018 CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 Pfam PF07499 RuvA, C-terminal domain 156 199 2.2E-11 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 Gene3D G3DSA:1.10.8.10 127 199 3.3E-11 T 28-03-2018 CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 Gene3D G3DSA:1.10.150.20 67 126 9.2E-13 T 28-03-2018 CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 SUPERFAMILY SSF50249 1 63 2.97E-11 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 SUPERFAMILY SSF47781 66 133 2.89E-19 T 28-03-2018 IPR010994 RuvA domain 2-like CJD35_RS04905 aad56b3e55b442b0b9978e557a724839 202 Gene3D G3DSA:2.40.50.140 1 66 2.1E-18 T 28-03-2018 CJD35_RS17925 a3e8179030cd8bc3fce10fa92bb67d91 497 PIRSF PIRSF000538 1 497 4.4E-166 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CJD35_RS17925 a3e8179030cd8bc3fce10fa92bb67d91 497 SUPERFAMILY SSF53067 251 492 8.42E-75 T 28-03-2018 CJD35_RS17925 a3e8179030cd8bc3fce10fa92bb67d91 497 Gene3D G3DSA:3.30.420.40 1 245 2.0E-80 T 28-03-2018 CJD35_RS17925 a3e8179030cd8bc3fce10fa92bb67d91 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 447 2.2E-52 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CJD35_RS17925 a3e8179030cd8bc3fce10fa92bb67d91 497 SUPERFAMILY SSF53067 3 252 2.5E-89 T 28-03-2018 CJD35_RS17925 a3e8179030cd8bc3fce10fa92bb67d91 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 249 4.4E-69 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CJD35_RS17925 a3e8179030cd8bc3fce10fa92bb67d91 497 Gene3D G3DSA:3.30.420.40 246 496 8.0E-70 T 28-03-2018 CJD35_RS17925 a3e8179030cd8bc3fce10fa92bb67d91 497 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 359 379 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CJD35_RS17925 a3e8179030cd8bc3fce10fa92bb67d91 497 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 491 8.6E-197 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CJD35_RS08550 4d2e9dbe2eb93b3b23ac2da9038657eb 250 Pfam PF00297 Ribosomal protein L3 83 181 1.3E-17 T 28-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08550 4d2e9dbe2eb93b3b23ac2da9038657eb 250 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 28-03-2018 IPR019926 Ribosomal protein L3, conserved site CJD35_RS08550 4d2e9dbe2eb93b3b23ac2da9038657eb 250 SUPERFAMILY SSF50447 1 219 2.56E-82 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CJD35_RS08550 4d2e9dbe2eb93b3b23ac2da9038657eb 250 Gene3D G3DSA:4.10.960.10 58 166 6.9E-36 T 28-03-2018 CJD35_RS08550 4d2e9dbe2eb93b3b23ac2da9038657eb 250 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 205 1.2E-83 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08550 4d2e9dbe2eb93b3b23ac2da9038657eb 250 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 208 35.672 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03800 d084f5a4e5a3ba65cc24ee4a6ac01907 158 Pfam PF01641 SelR domain 39 156 6.2E-50 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS03800 d084f5a4e5a3ba65cc24ee4a6ac01907 158 SUPERFAMILY SSF51316 35 157 1.15E-55 T 28-03-2018 IPR011057 Mss4-like CJD35_RS03800 d084f5a4e5a3ba65cc24ee4a6ac01907 158 Gene3D G3DSA:2.170.150.20 25 158 7.6E-58 T 28-03-2018 CJD35_RS03800 d084f5a4e5a3ba65cc24ee4a6ac01907 158 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 35 157 6.5E-51 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS09645 7417c3c2cb7c2a5b6265cc0ff97ec103 71 Pfam PF01206 Sulfurtransferase TusA 7 55 5.2E-8 T 28-03-2018 IPR001455 TusA-like domain CJD35_RS09645 7417c3c2cb7c2a5b6265cc0ff97ec103 71 SUPERFAMILY SSF64307 5 56 3.27E-9 T 28-03-2018 IPR001455 TusA-like domain CJD35_RS09645 7417c3c2cb7c2a5b6265cc0ff97ec103 71 Gene3D G3DSA:3.30.110.40 4 66 7.7E-10 T 28-03-2018 IPR001455 TusA-like domain CJD35_RS10260 d7c994f12cfc09474ae58664f96737fa 255 Pfam PF08543 Phosphomethylpyrimidine kinase 13 243 2.0E-73 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CJD35_RS10260 d7c994f12cfc09474ae58664f96737fa 255 SUPERFAMILY SSF53613 2 243 1.11E-63 T 28-03-2018 IPR029056 Ribokinase-like CJD35_RS10260 d7c994f12cfc09474ae58664f96737fa 255 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 243 1.5E-65 T 28-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CJD35_RS10260 d7c994f12cfc09474ae58664f96737fa 255 Gene3D G3DSA:3.40.1190.20 1 247 8.7E-50 T 28-03-2018 IPR029056 Ribokinase-like CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 ProSitePatterns PS00450 Aconitase family signature 1. 347 363 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 3 475 57.863 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 Gene3D G3DSA:3.30.499.10 334 483 9.8E-53 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 ProSitePatterns PS01244 Aconitase family signature 2. 408 421 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 Gene3D G3DSA:3.40.1060.10 163 296 6.5E-40 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 PRINTS PR00415 Aconitase family signature 127 140 5.6E-48 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 PRINTS PR00415 Aconitase family signature 203 216 5.6E-48 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 PRINTS PR00415 Aconitase family signature 408 421 5.6E-48 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 PRINTS PR00415 Aconitase family signature 90 103 5.6E-48 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 PRINTS PR00415 Aconitase family signature 294 308 5.6E-48 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 PRINTS PR00415 Aconitase family signature 217 230 5.6E-48 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 PRINTS PR00415 Aconitase family signature 116 124 5.6E-48 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 PRINTS PR00415 Aconitase family signature 141 156 5.6E-48 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 PRINTS PR00415 Aconitase family signature 351 362 5.6E-48 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 SUPERFAMILY SSF53732 5 474 9.29E-165 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 Pfam PF00330 Aconitase family (aconitate hydratase) 9 466 7.9E-156 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 5 474 2.2E-227 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CJD35_RS02125 bb891063fbd1c1173592ee2196958c29 483 Gene3D G3DSA:3.30.499.10 2 162 3.9E-41 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 SUPERFAMILY SSF52540 198 444 8.13E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 448 1.1E-134 T 28-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 Gene3D G3DSA:1.10.150.80 505 590 5.5E-26 T 28-03-2018 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 SMART SM00341 516 590 1.1E-8 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 Pfam PF00271 Helicase conserved C-terminal domain 226 319 4.6E-11 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 SUPERFAMILY SSF52540 13 155 3.22E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 SUPERFAMILY SSF52540 294 333 3.22E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 Gene3D G3DSA:3.40.50.300 199 344 1.6E-26 T 28-03-2018 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 SMART SM00490 239 320 4.4E-23 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 Pfam PF00270 DEAD/DEAH box helicase 21 175 8.1E-14 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 Gene3D G3DSA:1.10.10.10 345 504 5.2E-35 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 Pfam PF16124 RecQ zinc-binding 332 392 3.1E-13 T 28-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 Pfam PF09382 RQC domain 394 503 4.2E-25 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 Gene3D G3DSA:3.40.50.300 1 198 3.7E-29 T 28-03-2018 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 SUPERFAMILY SSF47819 515 589 2.4E-23 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 SMART SM00956 399 500 2.7E-30 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 587 6.5E-199 T 28-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 Pfam PF00570 HRDC domain 521 586 3.2E-21 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CJD35_RS07250 ce16e9e79a3785183cb8a486552d42e6 590 SMART SM00487 14 208 3.7E-25 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS11155 30c44eaae703c7b52a8b0494349e526b 419 SUPERFAMILY SSF53901 1 258 8.33E-73 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS11155 30c44eaae703c7b52a8b0494349e526b 419 PIRSF PIRSF000447 1 419 1.3E-177 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CJD35_RS11155 30c44eaae703c7b52a8b0494349e526b 419 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 160 176 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site CJD35_RS11155 30c44eaae703c7b52a8b0494349e526b 419 Gene3D G3DSA:3.40.47.10 1 265 3.6E-75 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS11155 30c44eaae703c7b52a8b0494349e526b 419 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 417 5.6E-187 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CJD35_RS11155 30c44eaae703c7b52a8b0494349e526b 419 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 261 375 1.7E-37 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CJD35_RS11155 30c44eaae703c7b52a8b0494349e526b 419 Gene3D G3DSA:3.40.47.10 269 419 5.8E-50 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS11155 30c44eaae703c7b52a8b0494349e526b 419 SUPERFAMILY SSF53901 220 417 2.97E-70 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS11155 30c44eaae703c7b52a8b0494349e526b 419 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 253 1.5E-59 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CJD35_RS11155 30c44eaae703c7b52a8b0494349e526b 419 SMART SM00825 Beta-ketoacyl synthase 4 419 1.3E-16 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CJD35_RS12690 0c199d67405b2a8486356fd6b57acdc8 335 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 1 330 7.7E-100 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CJD35_RS12690 0c199d67405b2a8486356fd6b57acdc8 335 SUPERFAMILY SSF55729 1 330 1.83E-111 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS12690 0c199d67405b2a8486356fd6b57acdc8 335 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 330 5.9E-118 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CJD35_RS12690 0c199d67405b2a8486356fd6b57acdc8 335 Gene3D G3DSA:3.40.630.30 1 267 8.1E-14 T 28-03-2018 CJD35_RS12690 0c199d67405b2a8486356fd6b57acdc8 335 Gene3D G3DSA:2.40.40.20 274 332 1.2E-9 T 28-03-2018 CJD35_RS03225 b2df79b299343bacf5e1decce598b74d 281 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 202 279 3.5E-17 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJD35_RS03225 b2df79b299343bacf5e1decce598b74d 281 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 140 8.2E-41 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CJD35_RS03225 b2df79b299343bacf5e1decce598b74d 281 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 159 262 3.9E-32 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CJD35_RS03225 b2df79b299343bacf5e1decce598b74d 281 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CJD35_RS03225 b2df79b299343bacf5e1decce598b74d 281 Pfam PF00460 Flagella basal body rod protein 3 31 6.3E-6 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJD35_RS03225 b2df79b299343bacf5e1decce598b74d 281 SUPERFAMILY SSF117143 80 241 2.62E-38 T 28-03-2018 CJD35_RS01640 30353240c05cf05990a7966b051ce10b 145 Gene3D G3DSA:3.30.428.10 5 142 6.5E-12 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CJD35_RS01640 30353240c05cf05990a7966b051ce10b 145 SUPERFAMILY SSF54197 10 116 2.72E-23 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CJD35_RS09250 9d0cadfafdc1c8a25f03664cb29d8962 245 Gene3D G3DSA:3.40.1280.10 2 170 2.6E-61 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJD35_RS09250 9d0cadfafdc1c8a25f03664cb29d8962 245 PIRSF PIRSF000386 3 243 1.1E-84 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CJD35_RS09250 9d0cadfafdc1c8a25f03664cb29d8962 245 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 25 222 1.2E-47 T 28-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CJD35_RS09250 9d0cadfafdc1c8a25f03664cb29d8962 245 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 6 229 5.1E-74 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CJD35_RS09250 9d0cadfafdc1c8a25f03664cb29d8962 245 SUPERFAMILY SSF75217 3 229 7.85E-88 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CJD35_RS09250 9d0cadfafdc1c8a25f03664cb29d8962 245 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 245 95.602 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CJD35_RS09250 9d0cadfafdc1c8a25f03664cb29d8962 245 Gene3D G3DSA:1.10.1270.20 171 242 1.9E-28 T 28-03-2018 CJD35_RS19930 d9783d4428fc92c615aa90678d5b4eba 96 Gene3D G3DSA:1.10.1220.10 4 43 6.8E-8 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS03475 3e54fec42645bff6f8b7155feab4b54c 126 SUPERFAMILY SSF55298 1 125 8.33E-36 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJD35_RS03475 3e54fec42645bff6f8b7155feab4b54c 126 Pfam PF01042 Endoribonuclease L-PSP 13 123 1.7E-26 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CJD35_RS03475 3e54fec42645bff6f8b7155feab4b54c 126 Gene3D G3DSA:3.30.1330.40 1 125 3.2E-30 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJD35_RS14290 cca86b33e5873fe4dddee6b82d3fe939 501 SUPERFAMILY SSF52091 400 493 4.91E-14 T 28-03-2018 IPR002645 STAS domain CJD35_RS14290 cca86b33e5873fe4dddee6b82d3fe939 501 Gene3D G3DSA:3.30.750.24 398 490 3.1E-14 T 28-03-2018 IPR002645 STAS domain CJD35_RS14290 cca86b33e5873fe4dddee6b82d3fe939 501 Pfam PF01740 STAS domain 407 492 1.1E-8 T 28-03-2018 IPR002645 STAS domain CJD35_RS14290 cca86b33e5873fe4dddee6b82d3fe939 501 Pfam PF00916 Sulfate permease family 152 363 2.8E-28 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 546 42.436 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 PRINTS PR00298 60kDa chaperonin signature 83 110 7.4E-75 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 PRINTS PR00298 60kDa chaperonin signature 27 53 7.4E-75 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 PRINTS PR00298 60kDa chaperonin signature 268 291 7.4E-75 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 PRINTS PR00298 60kDa chaperonin signature 350 375 7.4E-75 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 PRINTS PR00298 60kDa chaperonin signature 398 419 7.4E-75 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 SUPERFAMILY SSF54849 137 204 6.87E-23 T 28-03-2018 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 SUPERFAMILY SSF52029 186 376 2.27E-86 T 28-03-2018 IPR027409 GroEL-like apical domain CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 Gene3D G3DSA:1.10.560.10 374 517 9.0E-26 T 28-03-2018 IPR027413 GroEL-like equatorial domain CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 28-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 Gene3D G3DSA:1.10.560.10 1 184 2.2E-44 T 28-03-2018 IPR027413 GroEL-like equatorial domain CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 1.8E-94 T 28-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 Gene3D G3DSA:3.50.7.10 185 373 1.0E-100 T 28-03-2018 IPR027409 GroEL-like apical domain CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 SUPERFAMILY SSF48592 406 522 2.91E-76 T 28-03-2018 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 SUPERFAMILY SSF48592 7 134 2.91E-76 T 28-03-2018 CJD35_RS01165 3e81f79f26457a995914e656c72eb2ec 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 4.2E-258 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS17610 7e2f3dae0dbc79c7071884837e68773f 250 SUPERFAMILY SSF47616 81 121 2.51E-27 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS17610 7e2f3dae0dbc79c7071884837e68773f 250 SUPERFAMILY SSF47616 149 239 2.51E-27 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS17610 7e2f3dae0dbc79c7071884837e68773f 250 SUPERFAMILY SSF52833 1 85 2.41E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS17610 7e2f3dae0dbc79c7071884837e68773f 250 Gene3D G3DSA:3.40.30.10 1 97 3.0E-28 T 28-03-2018 CJD35_RS17610 7e2f3dae0dbc79c7071884837e68773f 250 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 80 3.2E-20 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS17610 7e2f3dae0dbc79c7071884837e68773f 250 Gene3D G3DSA:1.20.1050.10 98 241 1.8E-25 T 28-03-2018 CJD35_RS17610 7e2f3dae0dbc79c7071884837e68773f 250 Pfam PF00043 Glutathione S-transferase, C-terminal domain 105 228 3.5E-22 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CJD35_RS16595 e5a2b2a5d9fa03d38dcbb16fea769a59 470 Pfam PF00202 Aminotransferase class-III 41 456 3.0E-92 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS16595 e5a2b2a5d9fa03d38dcbb16fea769a59 470 PIRSF PIRSF000521 4 459 1.9E-31 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS16595 e5a2b2a5d9fa03d38dcbb16fea769a59 470 Gene3D G3DSA:3.90.1150.10 341 468 1.3E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS16595 e5a2b2a5d9fa03d38dcbb16fea769a59 470 Gene3D G3DSA:3.40.640.10 80 340 5.2E-73 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS16595 e5a2b2a5d9fa03d38dcbb16fea769a59 470 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 263 300 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS16595 e5a2b2a5d9fa03d38dcbb16fea769a59 470 SUPERFAMILY SSF53383 20 457 4.22E-118 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS16595 e5a2b2a5d9fa03d38dcbb16fea769a59 470 Gene3D G3DSA:3.90.1150.10 6 79 6.1E-7 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS15460 4085ec52642a33ba1087ccb8144a9984 358 Pfam PF00296 Luciferase-like monooxygenase 24 310 4.0E-48 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS15460 4085ec52642a33ba1087ccb8144a9984 358 Gene3D G3DSA:3.20.20.30 15 341 1.6E-46 T 28-03-2018 CJD35_RS15460 4085ec52642a33ba1087ccb8144a9984 358 SUPERFAMILY SSF51679 18 314 1.83E-49 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 143 2.4E-40 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 PIRSF PIRSF000102 1 315 1.4E-102 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 2.3E-28 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 Gene3D G3DSA:3.40.50.720 5 145 1.4E-40 T 28-03-2018 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 SUPERFAMILY SSF51735 5 144 1.21E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 SUPERFAMILY SSF56327 144 312 2.31E-52 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 Hamap MF_00487 Malate dehydrogenase [mdh]. 3 313 45.545 T 28-03-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 310 6.5E-130 T 28-03-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 Gene3D G3DSA:3.90.110.10 146 315 1.1E-46 T 28-03-2018 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 PRINTS PR00086 L-lactate dehydrogenase signature 117 137 3.2E-29 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 3.2E-29 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 PRINTS PR00086 L-lactate dehydrogenase signature 29 53 3.2E-29 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 PRINTS PR00086 L-lactate dehydrogenase signature 141 159 3.2E-29 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJD35_RS01610 6cf3f94d995e9566a886f9df014b5cdd 320 PRINTS PR00086 L-lactate dehydrogenase signature 171 184 3.2E-29 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CJD35_RS16735 3b0928c4044510d9669e2b3aa60dc27c 237 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 56 66 - T 28-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 CJD35_RS16735 3b0928c4044510d9669e2b3aa60dc27c 237 SUPERFAMILY SSF52266 56 233 4.73E-45 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CJD35_RS16735 3b0928c4044510d9669e2b3aa60dc27c 237 Gene3D G3DSA:3.40.50.1110 68 236 5.1E-30 T 28-03-2018 CJD35_RS16735 3b0928c4044510d9669e2b3aa60dc27c 237 Gene3D G3DSA:3.40.50.1110 39 67 0.0086 T 28-03-2018 CJD35_RS16735 3b0928c4044510d9669e2b3aa60dc27c 237 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 58 219 7.6E-26 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CJD35_RS02705 5e3e15427f2ac668c1ac5d7062298e3a 323 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 230 240 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site CJD35_RS02705 5e3e15427f2ac668c1ac5d7062298e3a 323 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 8 295 18.062 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CJD35_RS02705 5e3e15427f2ac668c1ac5d7062298e3a 323 SUPERFAMILY SSF53613 11 291 8.29E-52 T 28-03-2018 IPR029056 Ribokinase-like CJD35_RS02705 5e3e15427f2ac668c1ac5d7062298e3a 323 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 13 291 6.5E-49 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CJD35_RS02705 5e3e15427f2ac668c1ac5d7062298e3a 323 Pfam PF01256 Carbohydrate kinase 31 284 4.3E-41 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CJD35_RS02705 5e3e15427f2ac668c1ac5d7062298e3a 323 Gene3D G3DSA:3.40.1190.20 13 273 1.9E-32 T 28-03-2018 IPR029056 Ribokinase-like CJD35_RS12155 2abe37b34dbf84e5f08586b207660f7f 164 Hamap MF_01398 ATP synthase subunit b [atpF]. 9 146 9.822 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CJD35_RS12155 2abe37b34dbf84e5f08586b207660f7f 164 Pfam PF00430 ATP synthase B/B' CF(0) 15 143 6.4E-16 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CJD35_RS10195 ffac5206865d4717f6db350c7bb0c680 112 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.7E-17 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 CJD35_RS10195 ffac5206865d4717f6db350c7bb0c680 112 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.7E-17 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 CJD35_RS10195 ffac5206865d4717f6db350c7bb0c680 112 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.7E-17 T 28-03-2018 IPR000813 7Fe ferredoxin GO:0009055 CJD35_RS10195 ffac5206865d4717f6db350c7bb0c680 112 Gene3D G3DSA:3.30.70.20 18 43 4.1E-11 T 28-03-2018 CJD35_RS10195 ffac5206865d4717f6db350c7bb0c680 112 Gene3D G3DSA:3.30.70.20 1 17 0.057 T 28-03-2018 CJD35_RS10195 ffac5206865d4717f6db350c7bb0c680 112 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJD35_RS10195 ffac5206865d4717f6db350c7bb0c680 112 Pfam PF11953 Domain of unknown function (DUF3470) 64 105 2.9E-20 T 28-03-2018 IPR022569 Ferredoxin, C-terminal CJD35_RS10195 ffac5206865d4717f6db350c7bb0c680 112 SUPERFAMILY SSF54862 3 103 2.22E-23 T 28-03-2018 CJD35_RS10195 ffac5206865d4717f6db350c7bb0c680 112 Pfam PF00037 4Fe-4S binding domain 34 55 3.1E-7 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CJD35_RS10195 ffac5206865d4717f6db350c7bb0c680 112 Gene3D G3DSA:3.30.70.20 44 102 8.3E-10 T 28-03-2018 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 Gene3D G3DSA:2.40.30.20 3 82 2.9E-40 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 7.1E-19 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 SUPERFAMILY SSF52540 96 378 3.8E-103 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 509 52.131 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 379 504 2.4E-48 T 28-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 SUPERFAMILY SSF47917 380 508 3.14E-48 T 28-03-2018 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 SUPERFAMILY SSF50615 10 94 4.19E-30 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 372 1.0E-75 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 PIRSF PIRSF039088 1 509 2.9E-280 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 Gene3D G3DSA:3.40.50.300 83 372 2.9E-126 T 28-03-2018 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 509 7.7E-256 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09750 4ed53f3ab7436e64c90bb97aaddc5163 509 Gene3D G3DSA:1.20.150.20 381 508 4.3E-52 T 28-03-2018 CJD35_RS15770 3a96c4ed815ee458990ff7838e3f293e 364 SUPERFAMILY SSF56112 11 329 2.89E-30 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS15770 3a96c4ed815ee458990ff7838e3f293e 364 Pfam PF01636 Phosphotransferase enzyme family 81 297 1.5E-10 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CJD35_RS15770 3a96c4ed815ee458990ff7838e3f293e 364 SMART SM00587 122 306 1.8E-4 T 28-03-2018 IPR015897 CHK kinase-like CJD35_RS15770 3a96c4ed815ee458990ff7838e3f293e 364 Gene3D G3DSA:3.90.1200.10 136 338 1.4E-13 T 28-03-2018 CJD35_RS06910 7e94310a2510d73e9be4ab01025a911e 265 Gene3D G3DSA:1.10.10.10 198 263 1.1E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS06910 7e94310a2510d73e9be4ab01025a911e 265 SUPERFAMILY SSF46894 193 261 4.42E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS06910 7e94310a2510d73e9be4ab01025a911e 265 Pfam PF00196 Bacterial regulatory proteins, luxR family 200 250 7.7E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS06910 7e94310a2510d73e9be4ab01025a911e 265 SMART SM00421 198 255 2.1E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS06910 7e94310a2510d73e9be4ab01025a911e 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 201 215 1.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS06910 7e94310a2510d73e9be4ab01025a911e 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 215 231 1.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS06910 7e94310a2510d73e9be4ab01025a911e 265 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 231 243 1.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS06910 7e94310a2510d73e9be4ab01025a911e 265 Gene3D G3DSA:3.30.450.80 20 192 9.7E-18 T 28-03-2018 CJD35_RS06910 7e94310a2510d73e9be4ab01025a911e 265 ProSitePatterns PS00622 LuxR-type HTH domain signature. 215 242 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS17830 a46b379613815415dd3a945297bf9595 906 SUPERFAMILY SSF56935 265 440 1.43E-94 T 28-03-2018 CJD35_RS17830 a46b379613815415dd3a945297bf9595 906 SUPERFAMILY SSF56935 494 564 1.43E-94 T 28-03-2018 CJD35_RS17830 a46b379613815415dd3a945297bf9595 906 SUPERFAMILY SSF56935 605 747 1.43E-94 T 28-03-2018 CJD35_RS17830 a46b379613815415dd3a945297bf9595 906 SUPERFAMILY SSF56935 783 880 1.43E-94 T 28-03-2018 CJD35_RS17830 a46b379613815415dd3a945297bf9595 906 SUPERFAMILY SSF56935 40 226 1.43E-94 T 28-03-2018 CJD35_RS17830 a46b379613815415dd3a945297bf9595 906 Gene3D G3DSA:2.40.170.20 173 906 3.2E-56 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17830 a46b379613815415dd3a945297bf9595 906 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 163 1.3E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17830 a46b379613815415dd3a945297bf9595 906 Gene3D G3DSA:2.170.130.10 37 172 8.0E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17830 a46b379613815415dd3a945297bf9595 906 Pfam PF00593 TonB dependent receptor 355 892 1.4E-30 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS01290 aa0d40e4f42f15a318dc2e4290bf8d4a 246 ProSitePatterns PS00171 Triosephosphate isomerase active site. 161 171 - T 28-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS01290 aa0d40e4f42f15a318dc2e4290bf8d4a 246 Pfam PF00121 Triosephosphate isomerase 5 242 1.9E-68 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS01290 aa0d40e4f42f15a318dc2e4290bf8d4a 246 Gene3D G3DSA:3.20.20.70 1 246 6.9E-84 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS01290 aa0d40e4f42f15a318dc2e4290bf8d4a 246 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 6 236 1.3E-44 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS01290 aa0d40e4f42f15a318dc2e4290bf8d4a 246 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 245 33.133 T 28-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS01290 aa0d40e4f42f15a318dc2e4290bf8d4a 246 SUPERFAMILY SSF51351 2 243 5.63E-76 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 SUPERFAMILY SSF55874 303 476 2.23E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 Pfam PF05227 CHASE3 domain 38 170 7.3E-29 T 28-03-2018 IPR007891 CHASE3 CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 5.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 473 5.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 5.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 5.9E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 SUPERFAMILY SSF47384 232 309 1.26E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 SMART SM00388 244 312 0.0025 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 Gene3D G3DSA:3.30.565.10 311 476 1.0E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 SUPERFAMILY SSF52172 501 616 1.2E-27 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 Pfam PF00072 Response regulator receiver domain 501 611 9.2E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 Gene3D G3DSA:1.10.287.130 225 308 3.7E-8 T 28-03-2018 CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 474 2.0E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 SMART SM00448 499 611 1.8E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 SMART SM00387 353 476 6.7E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS03355 7f0aec63ca929a875be411608089ea16 619 Gene3D G3DSA:3.40.50.2300 500 619 1.2E-23 T 28-03-2018 CJD35_RS00960 1e5a2f4aee67c80dd35d492d7636d747 627 SUPERFAMILY SSF52096 454 515 1.09E-36 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS00960 1e5a2f4aee67c80dd35d492d7636d747 627 SUPERFAMILY SSF52096 306 425 1.09E-36 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS00960 1e5a2f4aee67c80dd35d492d7636d747 627 Gene3D G3DSA:3.90.226.10 304 590 1.5E-40 T 28-03-2018 CJD35_RS00960 1e5a2f4aee67c80dd35d492d7636d747 627 Pfam PF01343 Peptidase family S49 126 279 1.3E-25 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CJD35_RS00960 1e5a2f4aee67c80dd35d492d7636d747 627 Pfam PF01343 Peptidase family S49 377 528 1.9E-40 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CJD35_RS00960 1e5a2f4aee67c80dd35d492d7636d747 627 SUPERFAMILY SSF52096 197 270 3.23E-18 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS00960 1e5a2f4aee67c80dd35d492d7636d747 627 SUPERFAMILY SSF52096 38 166 3.23E-18 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS00960 1e5a2f4aee67c80dd35d492d7636d747 627 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 18 544 4.8E-145 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CJD35_RS00960 1e5a2f4aee67c80dd35d492d7636d747 627 PIRSF PIRSF001217 1 604 1.3E-162 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CJD35_RS00960 1e5a2f4aee67c80dd35d492d7636d747 627 Gene3D G3DSA:3.90.226.10 66 141 5.3E-4 T 28-03-2018 CJD35_RS00960 1e5a2f4aee67c80dd35d492d7636d747 627 Gene3D G3DSA:3.40.1750.10 174 281 3.9E-21 T 28-03-2018 CJD35_RS18590 1c48fbce6053a04e864f9a710543194a 864 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 31 277 5.1E-60 T 28-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CJD35_RS18590 1c48fbce6053a04e864f9a710543194a 864 SUPERFAMILY SSF52540 426 770 3.2E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18590 1c48fbce6053a04e864f9a710543194a 864 Gene3D G3DSA:3.40.50.300 462 770 1.7E-21 T 28-03-2018 CJD35_RS18590 1c48fbce6053a04e864f9a710543194a 864 Pfam PF12846 AAA-like domain 476 735 1.0E-14 T 28-03-2018 CJD35_RS18590 1c48fbce6053a04e864f9a710543194a 864 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 36 841 6.4E-197 T 28-03-2018 IPR014117 Type-IV secretion system protein TraC CJD35_RS17110 4f75ce0de882e0787c095866b500fde8 362 SMART SM00849 110 287 1.2E-23 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS17110 4f75ce0de882e0787c095866b500fde8 362 Pfam PF00753 Metallo-beta-lactamase superfamily 110 235 5.1E-21 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS17110 4f75ce0de882e0787c095866b500fde8 362 SUPERFAMILY SSF56281 85 320 8.78E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS17110 4f75ce0de882e0787c095866b500fde8 362 Gene3D G3DSA:3.60.15.10 82 320 1.1E-32 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 SUPERFAMILY SSF52172 49 177 2.7E-26 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 Pfam PF00072 Response regulator receiver domain 52 164 6.3E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 ProSitePatterns PS00622 LuxR-type HTH domain signature. 212 239 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 Gene3D G3DSA:1.10.10.10 176 258 3.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 Pfam PF00196 Bacterial regulatory proteins, luxR family 196 252 9.1E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 SMART SM00421 195 252 1.5E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 212 228 3.4E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 228 240 3.4E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 212 3.4E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 SMART SM00448 50 164 3.8E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 SUPERFAMILY SSF46894 189 256 1.02E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS06155 fc6b939ff1804a592e902b8c24710d2d 260 Gene3D G3DSA:3.40.50.2300 49 175 3.1E-27 T 28-03-2018 CJD35_RS17710 07be1466617925f060370a2537763f4c 255 Pfam PF00043 Glutathione S-transferase, C-terminal domain 107 230 4.1E-10 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CJD35_RS17710 07be1466617925f060370a2537763f4c 255 SUPERFAMILY SSF47616 151 237 1.03E-19 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS17710 07be1466617925f060370a2537763f4c 255 SUPERFAMILY SSF47616 80 122 1.03E-19 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS17710 07be1466617925f060370a2537763f4c 255 Gene3D G3DSA:1.20.1050.10 101 244 1.5E-17 T 28-03-2018 CJD35_RS17710 07be1466617925f060370a2537763f4c 255 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 82 7.3E-16 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS17710 07be1466617925f060370a2537763f4c 255 SUPERFAMILY SSF52833 2 86 3.62E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS17710 07be1466617925f060370a2537763f4c 255 Gene3D G3DSA:3.40.30.10 1 100 4.6E-28 T 28-03-2018 CJD35_RS20085 892f8c2ae366f2f9a994f57db5fa2f62 553 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 85 9.1E-6 T 28-03-2018 CJD35_RS20085 892f8c2ae366f2f9a994f57db5fa2f62 553 Gene3D G3DSA:3.30.565.10 10 182 1.1E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS20085 892f8c2ae366f2f9a994f57db5fa2f62 553 SUPERFAMILY SSF55874 27 151 1.83E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS04235 0dc7004b9d72ce27dc6e44c9d7a092af 421 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 11 420 39.243 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CJD35_RS04235 0dc7004b9d72ce27dc6e44c9d7a092af 421 PIRSF PIRSF000151 5 421 3.0E-167 T 28-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CJD35_RS04235 0dc7004b9d72ce27dc6e44c9d7a092af 421 Gene3D G3DSA:3.40.605.10 3 246 1.1E-44 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS04235 0dc7004b9d72ce27dc6e44c9d7a092af 421 Pfam PF00171 Aldehyde dehydrogenase family 17 288 6.5E-17 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS04235 0dc7004b9d72ce27dc6e44c9d7a092af 421 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 19 410 5.3E-136 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CJD35_RS04235 0dc7004b9d72ce27dc6e44c9d7a092af 421 Gene3D G3DSA:3.40.605.10 247 421 6.6E-38 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS04235 0dc7004b9d72ce27dc6e44c9d7a092af 421 SUPERFAMILY SSF53720 15 420 1.44E-113 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS14995 a01af36bf56cacaad62f11db7090efaf 201 Gene3D G3DSA:3.30.1330.110 11 200 3.2E-69 T 28-03-2018 IPR009569 Amino acid synthesis, putative CJD35_RS14995 a01af36bf56cacaad62f11db7090efaf 201 SUPERFAMILY SSF160519 11 197 3.14E-62 T 28-03-2018 IPR009569 Amino acid synthesis, putative CJD35_RS14995 a01af36bf56cacaad62f11db7090efaf 201 Pfam PF06684 Amino acid synthesis 13 188 5.3E-63 T 28-03-2018 IPR009569 Amino acid synthesis, putative CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 Gene3D G3DSA:3.30.930.10 502 697 8.0E-30 T 28-03-2018 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 SUPERFAMILY SSF54991 710 804 5.36E-21 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 Pfam PF03147 Ferredoxin-fold anticodon binding domain 714 804 1.1E-20 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 SUPERFAMILY SSF55681 478 696 1.24E-37 T 28-03-2018 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 Gene3D G3DSA:2.40.50.140 56 161 3.5E-32 T 28-03-2018 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 Pfam PF03484 tRNA synthetase B5 domain 405 482 6.4E-12 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 Gene3D G3DSA:3.30.56.10 1 55 2.1E-8 T 28-03-2018 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 799 38.215 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 Gene3D G3DSA:3.50.40.10 201 393 8.8E-64 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 SUPERFAMILY SSF56037 203 394 1.05E-64 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 Gene3D G3DSA:3.30.70.380 710 804 3.1E-18 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 Gene3D G3DSA:3.30.56.10 399 486 4.4E-16 T 28-03-2018 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 804 2.6E-201 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 SUPERFAMILY SSF50249 36 190 4.16E-42 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 Pfam PF01588 Putative tRNA binding domain 46 146 5.4E-22 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 SMART SM00873 212 384 6.4E-75 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 SUPERFAMILY SSF46955 401 486 1.1E-10 T 28-03-2018 IPR009061 Putative DNA-binding domain CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 Pfam PF03483 B3/4 domain 212 384 5.6E-59 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 SMART SM00874 400 482 4.0E-17 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CJD35_RS03680 6dd8727b111f45ad941510bd95d91318 805 SMART SM00896 712 804 4.2E-32 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CJD35_RS16100 f70f3b060294feae4fd6a4bb1b53b2b9 451 SUPERFAMILY SSF56349 237 433 1.06E-32 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS16100 f70f3b060294feae4fd6a4bb1b53b2b9 451 Gene3D G3DSA:1.10.443.10 231 441 1.9E-32 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS16100 f70f3b060294feae4fd6a4bb1b53b2b9 451 Gene3D G3DSA:1.10.150.130 9 106 4.4E-6 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS16100 f70f3b060294feae4fd6a4bb1b53b2b9 451 Pfam PF00589 Phage integrase family 240 426 2.6E-20 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20420 f70f3b060294feae4fd6a4bb1b53b2b9 451 SUPERFAMILY SSF56349 237 433 1.06E-32 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS20420 f70f3b060294feae4fd6a4bb1b53b2b9 451 Gene3D G3DSA:1.10.443.10 231 441 1.9E-32 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20420 f70f3b060294feae4fd6a4bb1b53b2b9 451 Gene3D G3DSA:1.10.150.130 9 106 4.4E-6 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20420 f70f3b060294feae4fd6a4bb1b53b2b9 451 Pfam PF00589 Phage integrase family 240 426 2.6E-20 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19225 f70f3b060294feae4fd6a4bb1b53b2b9 451 SUPERFAMILY SSF56349 237 433 1.06E-32 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS19225 f70f3b060294feae4fd6a4bb1b53b2b9 451 Gene3D G3DSA:1.10.443.10 231 441 1.9E-32 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19225 f70f3b060294feae4fd6a4bb1b53b2b9 451 Gene3D G3DSA:1.10.150.130 9 106 4.4E-6 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS19225 f70f3b060294feae4fd6a4bb1b53b2b9 451 Pfam PF00589 Phage integrase family 240 426 2.6E-20 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS08610 5e544ed10b01faa09231d5b0482656e9 191 Pfam PF00281 Ribosomal protein L5 29 85 2.3E-29 T 28-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08610 5e544ed10b01faa09231d5b0482656e9 191 ProSitePatterns PS00358 Ribosomal protein L5 signature. 62 78 - T 28-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08610 5e544ed10b01faa09231d5b0482656e9 191 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 6 184 43.873 T 28-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08610 5e544ed10b01faa09231d5b0482656e9 191 PIRSF PIRSF002161 3 190 5.8E-73 T 28-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08610 5e544ed10b01faa09231d5b0482656e9 191 Gene3D G3DSA:3.30.1440.10 6 184 3.3E-81 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08610 5e544ed10b01faa09231d5b0482656e9 191 SUPERFAMILY SSF55282 10 182 4.71E-79 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08610 5e544ed10b01faa09231d5b0482656e9 191 Pfam PF00673 ribosomal L5P family C-terminus 89 182 1.1E-42 T 28-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS06690 e08893ee9c82d2dcebee2f5f5325de58 113 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 2 111 2.6E-23 T 28-03-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein CJD35_RS06690 e08893ee9c82d2dcebee2f5f5325de58 113 SUPERFAMILY SSF64076 2 112 3.01E-25 T 28-03-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein CJD35_RS06690 e08893ee9c82d2dcebee2f5f5325de58 113 Gene3D G3DSA:3.40.1230.10 1 113 6.7E-25 T 28-03-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein CJD35_RS19405 b70936fd368c9bda93087968922a073a 297 Gene3D G3DSA:3.40.190.10 51 181 2.5E-23 T 28-03-2018 CJD35_RS19405 b70936fd368c9bda93087968922a073a 297 Pfam PF09084 NMT1/THI5 like 53 107 1.2E-4 T 28-03-2018 IPR015168 SsuA/THI5-like CJD35_RS19405 b70936fd368c9bda93087968922a073a 297 SUPERFAMILY SSF53850 133 286 3.11E-30 T 28-03-2018 CJD35_RS19405 b70936fd368c9bda93087968922a073a 297 SUPERFAMILY SSF53850 4 102 3.11E-30 T 28-03-2018 CJD35_RS12265 43f135628c9738f7627014e2909a61b1 154 SMART SM01049 27 106 5.1E-9 T 28-03-2018 IPR033480 Single Cache domain 2 CJD35_RS12265 43f135628c9738f7627014e2909a61b1 154 Pfam PF17200 Single Cache domain 2 31 143 1.4E-14 T 28-03-2018 IPR033480 Single Cache domain 2 CJD35_RS12265 43f135628c9738f7627014e2909a61b1 154 Gene3D G3DSA:3.30.450.20 5 154 2.3E-23 T 28-03-2018 CJD35_RS15825 0f386f3e724d39937cbfeb935bff41cd 457 Pfam PF01636 Phosphotransferase enzyme family 69 259 2.9E-13 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CJD35_RS15825 0f386f3e724d39937cbfeb935bff41cd 457 Gene3D G3DSA:3.30.200.20 7 110 9.2E-5 T 28-03-2018 CJD35_RS15825 0f386f3e724d39937cbfeb935bff41cd 457 Gene3D G3DSA:3.90.1200.10 111 278 6.8E-10 T 28-03-2018 CJD35_RS15825 0f386f3e724d39937cbfeb935bff41cd 457 SUPERFAMILY SSF56112 54 263 2.19E-19 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 93 2.5E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 112 2.5E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 150 2.5E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 13 2.5E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 48 64 2.5E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 Gene3D G3DSA:3.40.50.720 1 169 1.3E-43 T 28-03-2018 CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 2 165 1.3E-37 T 28-03-2018 CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 93 3.7E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 54 62 3.7E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 2 13 3.7E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 61 89 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS02725 10f86e938a9d904644eadea2b075e534 169 SUPERFAMILY SSF51735 2 166 3.45E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 Gene3D G3DSA:3.30.450.20 168 293 5.5E-6 T 28-03-2018 CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 Gene3D G3DSA:3.30.565.10 415 557 1.4E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 PIRSF PIRSF036431 322 557 6.5E-74 T 28-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 PIRSF PIRSF036431 2 332 1.2E-71 T 28-03-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 Pfam PF00512 His Kinase A (phospho-acceptor) domain 348 415 8.1E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 SUPERFAMILY SSF55874 415 552 1.96E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 Gene3D G3DSA:3.30.450.20 61 167 1.2E-19 T 28-03-2018 CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 518 1.3E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 504 1.3E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 537 1.3E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 PRINTS PR00344 Bacterial sensor protein C-terminal signature 542 555 1.3E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 SMART SM00387 455 556 1.7E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 SUPERFAMILY SSF47384 333 416 3.92E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 Gene3D G3DSA:1.10.287.130 335 411 6.1E-8 T 28-03-2018 CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 SUPERFAMILY SSF103190 60 193 4.32E-12 T 28-03-2018 IPR029151 Periplasmic sensor domain-like CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 SMART SM00388 347 415 2.5E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 458 541 4.1E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS17145 f84c43bcd93d1d472e938a69868df704 557 Pfam PF02743 Cache domain 39 216 3.6E-13 T 28-03-2018 IPR033479 Double Cache domain 1 CJD35_RS11730 b816132579331b76d5ef251596fd655d 356 Gene3D G3DSA:3.40.630.30 135 309 3.7E-24 T 28-03-2018 CJD35_RS11730 b816132579331b76d5ef251596fd655d 356 Pfam PF13480 Acetyltransferase (GNAT) domain 162 298 2.9E-18 T 28-03-2018 CJD35_RS11730 b816132579331b76d5ef251596fd655d 356 TIGRFAM TIGR03019 pepcterm_femAB: FemAB-related protein, PEP-CTERM system-associated 24 356 3.6E-94 T 28-03-2018 IPR017469 PEP-CTERM system-associated, FemAB-related CJD35_RS11730 b816132579331b76d5ef251596fd655d 356 SUPERFAMILY SSF55729 161 313 7.95E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS12320 4b1af3ad36eecbdcfbf0a83baf78858a 440 PIRSF PIRSF001563 10 438 1.4E-99 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CJD35_RS12320 4b1af3ad36eecbdcfbf0a83baf78858a 440 Gene3D G3DSA:3.40.1190.10 1 287 2.4E-74 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS12320 4b1af3ad36eecbdcfbf0a83baf78858a 440 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CJD35_RS12320 4b1af3ad36eecbdcfbf0a83baf78858a 440 SUPERFAMILY SSF53244 293 435 2.75E-19 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CJD35_RS12320 4b1af3ad36eecbdcfbf0a83baf78858a 440 Pfam PF08245 Mur ligase middle domain 54 270 1.2E-7 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS12320 4b1af3ad36eecbdcfbf0a83baf78858a 440 Gene3D G3DSA:3.90.190.20 296 439 8.8E-16 T 28-03-2018 CJD35_RS12320 4b1af3ad36eecbdcfbf0a83baf78858a 440 TIGRFAM TIGR01499 folC: bifunctional protein FolC 31 434 2.6E-107 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CJD35_RS12320 4b1af3ad36eecbdcfbf0a83baf78858a 440 SUPERFAMILY SSF53623 13 287 3.09E-81 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS02205 9985690dc3a3a68e25caa4a80405c35d 246 SUPERFAMILY SSF75217 74 243 2.88E-41 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CJD35_RS02205 9985690dc3a3a68e25caa4a80405c35d 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 18 84 1.4E-7 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CJD35_RS02205 9985690dc3a3a68e25caa4a80405c35d 246 Pfam PF00588 SpoU rRNA Methylase family 102 241 1.2E-35 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CJD35_RS02205 9985690dc3a3a68e25caa4a80405c35d 246 Gene3D G3DSA:3.30.1330.30 3 82 3.5E-9 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CJD35_RS02205 9985690dc3a3a68e25caa4a80405c35d 246 SMART SM00967 16 86 1.0E-11 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CJD35_RS02205 9985690dc3a3a68e25caa4a80405c35d 246 Gene3D G3DSA:3.40.1280.10 97 246 1.0E-39 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJD35_RS02205 9985690dc3a3a68e25caa4a80405c35d 246 SUPERFAMILY SSF55315 12 83 2.59E-9 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CJD35_RS21115 dd4374d11df8ebf7e07f120112b43789 341 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 36 202 8.8E-31 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CJD35_RS21115 dd4374d11df8ebf7e07f120112b43789 341 SMART SM00470 39 130 2.9E-18 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS21115 dd4374d11df8ebf7e07f120112b43789 341 SUPERFAMILY SSF110849 37 132 2.09E-21 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS21115 dd4374d11df8ebf7e07f120112b43789 341 Gene3D G3DSA:3.90.1530.10 26 136 2.2E-29 T 28-03-2018 CJD35_RS21115 dd4374d11df8ebf7e07f120112b43789 341 SUPERFAMILY SSF109709 124 229 8.24E-12 T 28-03-2018 CJD35_RS21115 dd4374d11df8ebf7e07f120112b43789 341 Pfam PF02195 ParB-like nuclease domain 41 120 6.4E-19 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 SUPERFAMILY SSF47384 223 295 4.51E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 402 1.3E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 416 1.3E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.3E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 1.3E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 SMART SM00387 338 459 2.7E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 Gene3D G3DSA:1.10.287.130 221 293 1.3E-11 T 28-03-2018 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 Pfam PF00072 Response regulator receiver domain 480 562 1.3E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 296 3.5E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 456 7.6E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 Gene3D G3DSA:3.30.450.40 16 220 4.6E-25 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 SUPERFAMILY SSF55874 287 456 9.95E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 SMART SM00388 231 297 5.9E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 SUPERFAMILY SSF52172 478 592 9.53E-24 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 Gene3D G3DSA:3.30.565.10 299 469 1.5E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 SUPERFAMILY SSF55781 40 202 2.4E-18 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 Pfam PF13185 GAF domain 39 189 9.5E-12 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 Gene3D G3DSA:3.40.50.2300 470 593 2.3E-22 T 28-03-2018 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 SMART SM00065 40 199 0.0017 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS02740 0520650c074c99743f4fd0e850dcf721 593 SMART SM00448 478 588 3.6E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS03060 f2d7ad42235b7cf9aab17ecb9ebaf189 467 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 224 449 5.7E-41 T 28-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CJD35_RS03060 f2d7ad42235b7cf9aab17ecb9ebaf189 467 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 16 113 2.2E-12 T 28-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CJD35_RS03060 f2d7ad42235b7cf9aab17ecb9ebaf189 467 Gene3D G3DSA:1.20.5.50 308 465 3.5E-4 T 28-03-2018 CJD35_RS07300 4978cf08f9f468be9a3f2884afe02238 448 Pfam PF00909 Ammonium Transporter Family 42 446 1.5E-112 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CJD35_RS07300 4978cf08f9f468be9a3f2884afe02238 448 Gene3D G3DSA:1.10.3430.10 32 427 8.8E-127 T 28-03-2018 CJD35_RS07300 4978cf08f9f468be9a3f2884afe02238 448 TIGRFAM TIGR00836 amt: ammonium transporter 40 446 1.5E-127 T 28-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CJD35_RS07300 4978cf08f9f468be9a3f2884afe02238 448 SUPERFAMILY SSF111352 36 427 3.66E-122 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CJD35_RS07300 4978cf08f9f468be9a3f2884afe02238 448 ProSitePatterns PS01219 Ammonium transporters signature. 203 228 - T 28-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CJD35_RS07300 4978cf08f9f468be9a3f2884afe02238 448 PRINTS PR00342 Rhesus blood group protein signature 273 295 6.3E-6 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CJD35_RS07300 4978cf08f9f468be9a3f2884afe02238 448 PRINTS PR00342 Rhesus blood group protein signature 146 162 6.3E-6 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CJD35_RS07300 4978cf08f9f468be9a3f2884afe02238 448 PRINTS PR00342 Rhesus blood group protein signature 242 260 6.3E-6 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CJD35_RS07300 4978cf08f9f468be9a3f2884afe02238 448 PRINTS PR00342 Rhesus blood group protein signature 328 346 6.3E-6 T 28-03-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Pfam PF00512 His Kinase A (phospho-acceptor) domain 526 590 1.4E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Gene3D G3DSA:3.30.450.20 324 490 1.8E-20 T 28-03-2018 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 SUPERFAMILY SSF55874 582 753 1.57E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 SMART SM00387 633 756 1.2E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Pfam PF00072 Response regulator receiver domain 777 888 1.9E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Pfam PF00072 Response regulator receiver domain 928 1030 1.8E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Gene3D G3DSA:3.30.450.20 46 146 1.9E-4 T 28-03-2018 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Gene3D G3DSA:3.40.50.2300 774 916 3.6E-21 T 28-03-2018 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 SUPERFAMILY SSF47384 513 589 6.28E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Gene3D G3DSA:3.30.450.40 147 323 3.1E-13 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Pfam PF08448 PAS fold 360 474 1.2E-6 T 28-03-2018 IPR013656 PAS fold-4 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 SUPERFAMILY SSF52172 775 897 6.97E-24 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Gene3D G3DSA:1.10.287.130 511 588 7.3E-7 T 28-03-2018 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 SUPERFAMILY SSF55785 343 470 4.57E-10 T 28-03-2018 IPR000014 PAS domain CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Gene3D G3DSA:3.30.565.10 592 759 3.0E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Gene3D G3DSA:3.40.50.2300 917 1038 7.3E-20 T 28-03-2018 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 SMART SM00448 926 1034 7.9E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 SMART SM00448 775 888 2.7E-14 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 SMART SM00388 526 592 2.2E-4 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 PRINTS PR00344 Bacterial sensor protein C-terminal signature 703 713 1.8E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 PRINTS PR00344 Bacterial sensor protein C-terminal signature 740 753 1.8E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 699 1.8E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 PRINTS PR00344 Bacterial sensor protein C-terminal signature 716 734 1.8E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 SUPERFAMILY SSF52172 926 1037 2.7E-21 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 634 755 6.6E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18800 55fe361d2ea58aaafdbfe28027793835 1040 SUPERFAMILY SSF55781 147 310 2.75E-8 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS15345 a4e59e7dfd1cf59c31ce9ae82cf412e8 130 Gene3D G3DSA:1.20.1290.10 3 130 8.0E-7 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CJD35_RS15345 a4e59e7dfd1cf59c31ce9ae82cf412e8 130 SUPERFAMILY SSF69118 6 114 1.69E-9 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CJD35_RS13980 43ed0e126ed60a288cf206ab4a544ff1 550 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 70 530 1.4E-233 T 28-03-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CJD35_RS13980 43ed0e126ed60a288cf206ab4a544ff1 550 Gene3D G3DSA:1.20.210.10 70 549 5.1E-98 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS13980 43ed0e126ed60a288cf206ab4a544ff1 550 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 266 321 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS13980 43ed0e126ed60a288cf206ab4a544ff1 550 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 75 506 1.9E-116 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS13980 43ed0e126ed60a288cf206ab4a544ff1 550 SUPERFAMILY SSF81442 70 529 3.27E-123 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS21170 7915d3962375c12c4d1b2b5d8fdc6d29 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CJD35_RS21170 7915d3962375c12c4d1b2b5d8fdc6d29 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 255 1.2E-67 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CJD35_RS21170 7915d3962375c12c4d1b2b5d8fdc6d29 269 Gene3D G3DSA:3.60.10.10 1 256 7.6E-47 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS21170 7915d3962375c12c4d1b2b5d8fdc6d29 269 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 212 223 - T 28-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CJD35_RS21170 7915d3962375c12c4d1b2b5d8fdc6d29 269 SUPERFAMILY SSF56219 2 255 7.2E-80 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS21170 7915d3962375c12c4d1b2b5d8fdc6d29 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 248 5.0E-17 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS21170 7915d3962375c12c4d1b2b5d8fdc6d29 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 255 2.3E-70 T 28-03-2018 CJD35_RS18050 7915d3962375c12c4d1b2b5d8fdc6d29 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CJD35_RS18050 7915d3962375c12c4d1b2b5d8fdc6d29 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 255 1.2E-67 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CJD35_RS18050 7915d3962375c12c4d1b2b5d8fdc6d29 269 Gene3D G3DSA:3.60.10.10 1 256 7.6E-47 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS18050 7915d3962375c12c4d1b2b5d8fdc6d29 269 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 212 223 - T 28-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CJD35_RS18050 7915d3962375c12c4d1b2b5d8fdc6d29 269 SUPERFAMILY SSF56219 2 255 7.2E-80 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS18050 7915d3962375c12c4d1b2b5d8fdc6d29 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 248 5.0E-17 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS18050 7915d3962375c12c4d1b2b5d8fdc6d29 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 255 2.3E-70 T 28-03-2018 CJD35_RS11715 37e3c659f49c1121808192b304377272 533 SUPERFAMILY SSF56935 62 322 8.63E-5 T 28-03-2018 CJD35_RS11715 37e3c659f49c1121808192b304377272 533 Gene3D G3DSA:2.40.128.130 48 256 8.9E-9 T 28-03-2018 CJD35_RS09995 9baddbfb3a95b4f08697b6c3024c1d46 252 Pfam PF00196 Bacterial regulatory proteins, luxR family 5 58 2.1E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS09995 9baddbfb3a95b4f08697b6c3024c1d46 252 SMART SM00421 2 59 8.9E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS09995 9baddbfb3a95b4f08697b6c3024c1d46 252 Gene3D G3DSA:1.10.10.10 4 63 1.7E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS09995 9baddbfb3a95b4f08697b6c3024c1d46 252 Pfam PF13211 Protein of unknown function (DUF4019) 151 248 1.3E-23 T 28-03-2018 IPR025091 Protein of unknown function DUF4019 CJD35_RS09995 9baddbfb3a95b4f08697b6c3024c1d46 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 5 19 1.8E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS09995 9baddbfb3a95b4f08697b6c3024c1d46 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 19 35 1.8E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS09995 9baddbfb3a95b4f08697b6c3024c1d46 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 35 47 1.8E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS09995 9baddbfb3a95b4f08697b6c3024c1d46 252 SUPERFAMILY SSF46894 3 61 4.08E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS12670 6dd748f93b20d97a6bfdcb34de6b5004 145 Pfam PF07811 TadE-like protein 21 63 1.9E-12 T 28-03-2018 IPR012495 TadE-like CJD35_RS20465 f53472099e681256d6fa58cddde3822b 305 Gene3D G3DSA:3.40.50.1390 1 105 6.3E-32 T 28-03-2018 CJD35_RS20465 f53472099e681256d6fa58cddde3822b 305 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS20465 f53472099e681256d6fa58cddde3822b 305 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS20465 f53472099e681256d6fa58cddde3822b 305 Gene3D G3DSA:1.20.5.40 106 135 2.8E-16 T 28-03-2018 CJD35_RS20465 f53472099e681256d6fa58cddde3822b 305 SUPERFAMILY SSF53041 1 136 1.44E-41 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20465 f53472099e681256d6fa58cddde3822b 305 Pfam PF00239 Resolvase, N terminal domain 4 136 1.8E-43 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20465 f53472099e681256d6fa58cddde3822b 305 SMART SM00857 3 137 2.6E-54 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS00155 65750b99a5ea356ea8c589c3bed4b05c 351 SUPERFAMILY SSF81324 21 157 2.35E-22 T 28-03-2018 CJD35_RS00155 65750b99a5ea356ea8c589c3bed4b05c 351 Pfam PF02254 TrkA-N domain 136 254 1.2E-23 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CJD35_RS00155 65750b99a5ea356ea8c589c3bed4b05c 351 Gene3D G3DSA:1.10.287.70 13 126 2.2E-13 T 28-03-2018 CJD35_RS00155 65750b99a5ea356ea8c589c3bed4b05c 351 Pfam PF07885 Ion channel 42 112 1.8E-12 T 28-03-2018 IPR013099 Potassium channel domain CJD35_RS00155 65750b99a5ea356ea8c589c3bed4b05c 351 SUPERFAMILY SSF51735 132 275 4.36E-27 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS00155 65750b99a5ea356ea8c589c3bed4b05c 351 Gene3D G3DSA:3.40.50.720 127 253 1.4E-25 T 28-03-2018 CJD35_RS09345 ec4aaeb4d6eacd7c24121d135d5d6adf 97 Pfam PF01541 GIY-YIG catalytic domain 5 77 1.3E-11 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS09345 ec4aaeb4d6eacd7c24121d135d5d6adf 97 Gene3D G3DSA:3.40.1440.10 3 95 2.2E-13 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS09345 ec4aaeb4d6eacd7c24121d135d5d6adf 97 SMART SM00465 4 82 0.0019 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS09345 ec4aaeb4d6eacd7c24121d135d5d6adf 97 SUPERFAMILY SSF82771 5 91 4.45E-20 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS14345 113ca4c37f17ac8ceca14adeb987dbf3 393 Gene3D G3DSA:3.90.550.10 18 218 6.3E-5 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS13310 5c14a8b15cca51029b12151e306a0a20 431 Gene3D G3DSA:3.40.50.970 16 422 1.1E-94 T 28-03-2018 CJD35_RS13310 5c14a8b15cca51029b12151e306a0a20 431 Pfam PF12573 2-oxoisovalerate dehydrogenase E1 alpha subunit N terminal 19 59 5.4E-15 T 28-03-2018 IPR022593 2-oxoisovalerate dehydrogenase, E1 alpha subunit, N-terminal domain KEGG: 00280+1.2.4.4|KEGG: 00640+1.2.4.4|MetaCyc: PWY-5046 CJD35_RS13310 5c14a8b15cca51029b12151e306a0a20 431 SUPERFAMILY SSF52518 62 423 3.44E-100 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS13310 5c14a8b15cca51029b12151e306a0a20 431 Pfam PF00676 Dehydrogenase E1 component 96 391 4.3E-96 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CJD35_RS22025 33ba2d237cf4a876d088d4892e3fde8e 206 SUPERFAMILY SSF49503 51 198 2.26E-36 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS22025 33ba2d237cf4a876d088d4892e3fde8e 206 ProSitePatterns PS00080 Multicopper oxidases signature 2. 181 192 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CJD35_RS22025 33ba2d237cf4a876d088d4892e3fde8e 206 Pfam PF07731 Multicopper oxidase 83 200 1.5E-27 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CJD35_RS22025 33ba2d237cf4a876d088d4892e3fde8e 206 ProSitePatterns PS00079 Multicopper oxidases signature 1. 176 196 - T 28-03-2018 IPR033138 Multicopper oxidases, conserved site CJD35_RS22025 33ba2d237cf4a876d088d4892e3fde8e 206 Gene3D G3DSA:2.60.40.420 1 199 6.1E-51 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 SUPERFAMILY SSF82866 826 1050 1.12E-55 T 28-03-2018 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 Gene3D G3DSA:3.30.70.1430 580 681 2.1E-14 T 28-03-2018 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 Pfam PF00873 AcrB/AcrD/AcrF family 18 1048 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 Gene3D G3DSA:3.30.2090.10 736 829 1.1E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 13 1050 0.0 T 28-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 SUPERFAMILY SSF82693 54 139 1.57E-21 T 28-03-2018 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 SUPERFAMILY SSF82714 204 287 1.57E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 Gene3D G3DSA:1.20.1640.10 305 531 2.7E-34 T 28-03-2018 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 Gene3D G3DSA:1.20.1640.10 830 1050 6.1E-37 T 28-03-2018 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 Gene3D G3DSA:3.30.70.1430 54 155 2.3E-22 T 28-03-2018 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 SUPERFAMILY SSF82866 313 518 1.11E-32 T 28-03-2018 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 Gene3D G3DSA:3.30.2090.10 202 289 5.3E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 PRINTS PR00702 Acriflavin resistance protein family signature 565 582 4.1E-18 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 4.1E-18 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 PRINTS PR00702 Acriflavin resistance protein family signature 351 374 4.1E-18 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 PRINTS PR00702 Acriflavin resistance protein family signature 378 399 4.1E-18 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 PRINTS PR00702 Acriflavin resistance protein family signature 492 515 4.1E-18 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 SUPERFAMILY SSF82693 579 679 7.59E-7 T 28-03-2018 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 SUPERFAMILY SSF82714 737 826 4.05E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 SUPERFAMILY SSF82693 167 203 3.66E-18 T 28-03-2018 CJD35_RS16260 cbdf9e9d85fd1ec1296edaca1e11fbc8 1052 SUPERFAMILY SSF82693 289 345 3.66E-18 T 28-03-2018 CJD35_RS03210 ad135013c4a751e8de32b5b2591a69d1 122 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CJD35_RS03210 ad135013c4a751e8de32b5b2591a69d1 122 PIRSF PIRSF002889 1 122 3.9E-34 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CJD35_RS03210 ad135013c4a751e8de32b5b2591a69d1 122 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 7 120 2.1E-26 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CJD35_RS03210 ad135013c4a751e8de32b5b2591a69d1 122 Pfam PF00460 Flagella basal body rod protein 10 38 1.1E-8 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 SUPERFAMILY SSF53223 10 161 3.67E-53 T 28-03-2018 CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 SUPERFAMILY SSF51735 163 450 8.54E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 Pfam PF00390 Malic enzyme, N-terminal domain 20 151 4.9E-27 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 Pfam PF01515 Phosphate acetyl/butaryl transferase 427 748 4.8E-77 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 Gene3D G3DSA:3.40.50.720 161 424 1.5E-76 T 28-03-2018 CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 SMART SM01274 18 151 2.2E-79 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 Gene3D G3DSA:3.40.50.10750 571 724 3.8E-44 T 28-03-2018 CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 SMART SM00919 163 399 1.2E-127 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 Gene3D G3DSA:3.40.50.10380 5 160 2.2E-34 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 SUPERFAMILY SSF53659 427 751 6.99E-70 T 28-03-2018 CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 Pfam PF03949 Malic enzyme, NAD binding domain 165 354 2.0E-16 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CJD35_RS14480 b95b1136a1f97c22cff04d74c80f1eb3 755 PIRSF PIRSF036684 1 755 0.0 T 28-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 SUPERFAMILY SSF53738 3 129 1.29E-35 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 154 250 3.1E-19 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 Gene3D G3DSA:3.40.120.10 257 364 1.3E-21 T 28-03-2018 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 SUPERFAMILY SSF53738 153 253 9.03E-26 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 11 121 3.8E-29 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 358 1.4E-18 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 SUPERFAMILY SSF53738 255 358 4.71E-28 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 Gene3D G3DSA:3.40.120.10 159 256 6.1E-26 T 28-03-2018 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 245 1.4E-21 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 167 186 1.4E-21 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 201 214 1.4E-21 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 1.4E-21 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 Gene3D G3DSA:3.40.120.10 2 158 1.7E-32 T 28-03-2018 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 369 446 1.8E-10 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 Gene3D G3DSA:3.30.310.50 365 450 1.7E-13 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS05635 b25cf309c63c22171b08ded35a8d1f99 460 SUPERFAMILY SSF55957 364 448 4.19E-20 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12950 67576d2c172f20e2a6b7bed70408fe28 471 Pfam PF01381 Helix-turn-helix 13 63 2.6E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS12950 67576d2c172f20e2a6b7bed70408fe28 471 Gene3D G3DSA:1.10.260.40 4 79 3.9E-11 T 28-03-2018 CJD35_RS12950 67576d2c172f20e2a6b7bed70408fe28 471 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 312 468 3.2E-65 T 28-03-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator CJD35_RS12950 67576d2c172f20e2a6b7bed70408fe28 471 SUPERFAMILY SSF47413 8 70 3.07E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS12950 67576d2c172f20e2a6b7bed70408fe28 471 Pfam PF06114 IrrE N-terminal-like domain 189 311 7.6E-16 T 28-03-2018 IPR010359 IrrE N-terminal-like domain CJD35_RS12950 67576d2c172f20e2a6b7bed70408fe28 471 SMART SM00530 12 67 4.0E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS12950 67576d2c172f20e2a6b7bed70408fe28 471 PIRSF PIRSF019251 2 471 2.3E-172 T 28-03-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 CJD35_RS07930 fb67e6d78c8c36c45c7dea3a426320e0 525 SUPERFAMILY SSF53649 78 500 7.85E-115 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJD35_RS07930 fb67e6d78c8c36c45c7dea3a426320e0 525 Pfam PF00884 Sulfatase 79 411 3.0E-79 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CJD35_RS07930 fb67e6d78c8c36c45c7dea3a426320e0 525 Gene3D G3DSA:3.30.1120.10 430 509 1.5E-8 T 28-03-2018 CJD35_RS07930 fb67e6d78c8c36c45c7dea3a426320e0 525 Gene3D G3DSA:3.40.720.10 79 429 6.1E-87 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 Pfam PF02803 Thiolase, C-terminal domain 269 390 1.4E-51 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 SUPERFAMILY SSF53901 3 267 5.04E-84 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.7E-138 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 SUPERFAMILY SSF53901 270 390 1.03E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 Pfam PF00108 Thiolase, N-terminal domain 4 260 2.1E-104 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 Gene3D G3DSA:3.40.47.10 264 388 4.1E-36 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 PIRSF PIRSF000429 1 390 4.2E-122 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 Gene3D G3DSA:3.40.47.10 148 263 2.2E-29 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS12995 dbbe00c87a71374a761bb78426b973c3 390 Gene3D G3DSA:3.40.47.10 1 141 6.4E-31 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS09240 0aed2b5dc03430852691ea3727142a60 124 Gene3D G3DSA:3.40.50.1010 3 124 4.3E-26 T 28-03-2018 IPR029060 PIN domain-like CJD35_RS09240 0aed2b5dc03430852691ea3727142a60 124 Pfam PF01850 PIN domain 4 115 4.0E-11 T 28-03-2018 IPR002716 PIN domain CJD35_RS09240 0aed2b5dc03430852691ea3727142a60 124 SUPERFAMILY SSF88723 1 123 3.08E-26 T 28-03-2018 IPR029060 PIN domain-like CJD35_RS09240 0aed2b5dc03430852691ea3727142a60 124 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 121 9.816 T 28-03-2018 IPR022907 VapC family GO:0004540 CJD35_RS16660 d1e8e92a565a33fe27300cf983570bbb 309 Pfam PF12833 Helix-turn-helix domain 224 304 1.0E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS16660 d1e8e92a565a33fe27300cf983570bbb 309 Pfam PF14525 AraC-binding-like domain 33 185 6.0E-11 T 28-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CJD35_RS16660 d1e8e92a565a33fe27300cf983570bbb 309 Gene3D G3DSA:1.10.10.60 192 242 1.6E-4 T 28-03-2018 CJD35_RS16660 d1e8e92a565a33fe27300cf983570bbb 309 SUPERFAMILY SSF46689 253 305 6.72E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS16660 d1e8e92a565a33fe27300cf983570bbb 309 Gene3D G3DSA:1.10.10.60 252 307 3.7E-13 T 28-03-2018 CJD35_RS16660 d1e8e92a565a33fe27300cf983570bbb 309 Gene3D G3DSA:2.60.120.280 52 164 0.001 T 28-03-2018 CJD35_RS16660 d1e8e92a565a33fe27300cf983570bbb 309 SMART SM00342 218 303 1.0E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS16660 d1e8e92a565a33fe27300cf983570bbb 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 303 1.2E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS16660 d1e8e92a565a33fe27300cf983570bbb 309 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 287 1.2E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS06820 69223ae6cd12c9c28290c78251726c0a 338 Pfam PF16884 N-terminal domain of oxidoreductase 5 110 3.1E-22 T 28-03-2018 CJD35_RS06820 69223ae6cd12c9c28290c78251726c0a 338 SMART SM00829 18 336 3.0E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS06820 69223ae6cd12c9c28290c78251726c0a 338 SUPERFAMILY SSF50129 1 148 3.51E-22 T 28-03-2018 IPR011032 GroES-like CJD35_RS06820 69223ae6cd12c9c28290c78251726c0a 338 Gene3D G3DSA:3.40.50.720 154 280 1.9E-32 T 28-03-2018 CJD35_RS06820 69223ae6cd12c9c28290c78251726c0a 338 Pfam PF00107 Zinc-binding dehydrogenase 164 294 5.2E-26 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS06820 69223ae6cd12c9c28290c78251726c0a 338 SUPERFAMILY SSF51735 135 304 1.72E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06820 69223ae6cd12c9c28290c78251726c0a 338 Gene3D G3DSA:3.90.180.10 1 153 2.4E-25 T 28-03-2018 CJD35_RS16160 fc74a70a2f5fd1d6a36c4c39611f0ee5 252 Gene3D G3DSA:1.10.10.10 175 245 5.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16160 fc74a70a2f5fd1d6a36c4c39611f0ee5 252 Pfam PF03472 Autoinducer binding domain 21 163 2.2E-28 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CJD35_RS16160 fc74a70a2f5fd1d6a36c4c39611f0ee5 252 SMART SM00421 181 238 2.9E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS16160 fc74a70a2f5fd1d6a36c4c39611f0ee5 252 SUPERFAMILY SSF46894 177 240 1.8E-13 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS16160 fc74a70a2f5fd1d6a36c4c39611f0ee5 252 SUPERFAMILY SSF75516 7 167 2.09E-32 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CJD35_RS16160 fc74a70a2f5fd1d6a36c4c39611f0ee5 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 214 2.5E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS16160 fc74a70a2f5fd1d6a36c4c39611f0ee5 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 198 2.5E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS16160 fc74a70a2f5fd1d6a36c4c39611f0ee5 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 214 226 2.5E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS16160 fc74a70a2f5fd1d6a36c4c39611f0ee5 252 Gene3D G3DSA:3.30.450.80 4 171 3.3E-33 T 28-03-2018 CJD35_RS16160 fc74a70a2f5fd1d6a36c4c39611f0ee5 252 Pfam PF00196 Bacterial regulatory proteins, luxR family 183 236 8.2E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS04975 392369bd0b9627b4f677d6978cdc6e4f 192 Gene3D G3DSA:1.10.1740.10 27 105 1.6E-10 T 28-03-2018 CJD35_RS04975 392369bd0b9627b4f677d6978cdc6e4f 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 187 3.5E-21 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS04975 392369bd0b9627b4f677d6978cdc6e4f 192 Pfam PF04542 Sigma-70 region 2 35 102 1.6E-6 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS04975 392369bd0b9627b4f677d6978cdc6e4f 192 Gene3D G3DSA:1.10.10.10 115 192 4.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS04975 392369bd0b9627b4f677d6978cdc6e4f 192 Pfam PF08281 Sigma-70, region 4 133 184 6.6E-16 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS04975 392369bd0b9627b4f677d6978cdc6e4f 192 SUPERFAMILY SSF88659 111 190 1.79E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS04975 392369bd0b9627b4f677d6978cdc6e4f 192 SUPERFAMILY SSF88946 32 113 2.63E-10 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 Gene3D G3DSA:3.40.50.720 149 245 3.3E-17 T 28-03-2018 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 SUPERFAMILY SSF51971 147 402 2.83E-69 T 28-03-2018 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 Gene3D G3DSA:3.40.50.720 393 481 2.0E-8 T 28-03-2018 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 10 470 1.2E-157 T 28-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 26 136 1.5E-34 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 PRINTS PR00419 Adrenodoxin reductase family signature 215 225 2.0E-32 T 28-03-2018 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 PRINTS PR00419 Adrenodoxin reductase family signature 327 340 2.0E-32 T 28-03-2018 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 PRINTS PR00419 Adrenodoxin reductase family signature 150 172 2.0E-32 T 28-03-2018 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 PRINTS PR00419 Adrenodoxin reductase family signature 293 307 2.0E-32 T 28-03-2018 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 PRINTS PR00419 Adrenodoxin reductase family signature 173 186 2.0E-32 T 28-03-2018 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 Gene3D G3DSA:3.50.50.60 318 392 2.7E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 Gene3D G3DSA:3.50.50.60 246 317 5.3E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 Gene3D G3DSA:1.10.1060.10 7 148 5.6E-35 T 28-03-2018 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 SUPERFAMILY SSF46548 9 159 2.09E-32 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CJD35_RS06715 809539dd2338354c89c498605ab90145 482 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 151 458 3.1E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS21895 d33f475d448ff40553472bd1a491c2eb 230 Pfam PF04335 VirB8 protein 19 224 1.1E-52 T 28-03-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 CJD35_RS21895 d33f475d448ff40553472bd1a491c2eb 230 SUPERFAMILY SSF54427 91 228 6.13E-34 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS21895 d33f475d448ff40553472bd1a491c2eb 230 PIRSF PIRSF003299 6 228 6.9E-66 T 28-03-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 CJD35_RS20130 fdc42aa21f1660cab5cb9287385457c1 141 TIGRFAM TIGR03741 PRTRC_E: PRTRC system protein E 2 114 8.2E-29 T 28-03-2018 IPR022273 ParB-related, ThiF-related cassette, protein E CJD35_RS02390 4a5d4e3706b3ac1db1010800ce9d700e 100 SUPERFAMILY SSF82057 28 99 5.49E-25 T 28-03-2018 CJD35_RS02390 4a5d4e3706b3ac1db1010800ce9d700e 100 Gene3D G3DSA:2.30.30.40 32 99 2.6E-30 T 28-03-2018 CJD35_RS02390 4a5d4e3706b3ac1db1010800ce9d700e 100 Pfam PF03831 PhnA domain 33 99 3.8E-29 T 28-03-2018 IPR013988 PhnA protein, C-terminal CJD35_RS03610 79e31d43db28341e8b09b8d2352a5a88 670 Gene3D G3DSA:2.170.130.10 19 167 8.2E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS03610 79e31d43db28341e8b09b8d2352a5a88 670 Gene3D G3DSA:2.40.170.20 169 669 2.9E-62 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS03610 79e31d43db28341e8b09b8d2352a5a88 670 Pfam PF00593 TonB dependent receptor 184 668 5.1E-49 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS03610 79e31d43db28341e8b09b8d2352a5a88 670 SUPERFAMILY SSF56935 18 668 1.98E-83 T 28-03-2018 CJD35_RS03610 79e31d43db28341e8b09b8d2352a5a88 670 Pfam PF07715 TonB-dependent Receptor Plug Domain 50 155 2.1E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS05820 3c4ee87739c80a23bf7d995206467ea1 694 Pfam PF00912 Transglycosylase 80 246 4.3E-59 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CJD35_RS05820 3c4ee87739c80a23bf7d995206467ea1 694 SUPERFAMILY SSF53955 59 278 2.25E-69 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS05820 3c4ee87739c80a23bf7d995206467ea1 694 SUPERFAMILY SSF56601 277 617 8.1E-110 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS05820 3c4ee87739c80a23bf7d995206467ea1 694 SUPERFAMILY SSF56601 228 250 8.1E-110 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS05820 3c4ee87739c80a23bf7d995206467ea1 694 Gene3D G3DSA:3.40.710.10 265 625 4.7E-100 T 28-03-2018 CJD35_RS05820 3c4ee87739c80a23bf7d995206467ea1 694 Gene3D G3DSA:1.10.3810.10 62 262 1.5E-68 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CJD35_RS05820 3c4ee87739c80a23bf7d995206467ea1 694 Pfam PF00905 Penicillin binding protein transpeptidase domain 332 555 7.0E-28 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CJD35_RS05820 3c4ee87739c80a23bf7d995206467ea1 694 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 82 593 4.1E-166 T 28-03-2018 CJD35_RS12805 7f369526235ec98a178d3000075cd3dd 259 Pfam PF03167 Uracil DNA glycosylase superfamily 106 251 2.9E-16 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS12805 7f369526235ec98a178d3000075cd3dd 259 Gene3D G3DSA:3.40.470.10 63 258 1.7E-21 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS12805 7f369526235ec98a178d3000075cd3dd 259 SUPERFAMILY SSF52141 79 255 1.41E-26 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS08200 e8cbe902056d0b5d2ed3ea4676423878 306 SUPERFAMILY SSF46785 3 73 2.81E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS08200 e8cbe902056d0b5d2ed3ea4676423878 306 Gene3D G3DSA:1.10.10.10 2 118 6.8E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS08200 e8cbe902056d0b5d2ed3ea4676423878 306 Pfam PF03466 LysR substrate binding domain 108 304 1.2E-24 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS08200 e8cbe902056d0b5d2ed3ea4676423878 306 Gene3D G3DSA:3.40.190.10 189 281 2.0E-13 T 28-03-2018 CJD35_RS08200 e8cbe902056d0b5d2ed3ea4676423878 306 SUPERFAMILY SSF53850 111 304 1.21E-25 T 28-03-2018 CJD35_RS08200 e8cbe902056d0b5d2ed3ea4676423878 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 1.3E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS08200 e8cbe902056d0b5d2ed3ea4676423878 306 Gene3D G3DSA:3.40.190.10 119 188 9.2E-14 T 28-03-2018 CJD35_RS14365 f29b889202600223ac9a06f2213ddd22 545 SUPERFAMILY SSF56281 9 419 6.55E-78 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS14365 f29b889202600223ac9a06f2213ddd22 545 Pfam PF00753 Metallo-beta-lactamase superfamily 28 165 2.3E-12 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS14365 f29b889202600223ac9a06f2213ddd22 545 SMART SM00849 19 214 6.3E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS14365 f29b889202600223ac9a06f2213ddd22 545 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 358 400 3.9E-9 T 28-03-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CJD35_RS14365 f29b889202600223ac9a06f2213ddd22 545 Gene3D G3DSA:3.60.15.10 1 442 6.7E-49 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS12885 548142c3790cd8c77af9ec099b50f8a7 408 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 2 402 7.1E-197 T 28-03-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 CJD35_RS12885 548142c3790cd8c77af9ec099b50f8a7 408 SUPERFAMILY SSF53383 3 399 9.46E-114 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS12885 548142c3790cd8c77af9ec099b50f8a7 408 Pfam PF00155 Aminotransferase class I and II 47 391 1.2E-75 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJD35_RS12885 548142c3790cd8c77af9ec099b50f8a7 408 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 245 254 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CJD35_RS12885 548142c3790cd8c77af9ec099b50f8a7 408 Gene3D G3DSA:3.40.640.10 36 292 1.2E-56 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS12885 548142c3790cd8c77af9ec099b50f8a7 408 Gene3D G3DSA:3.90.1150.10 293 402 7.0E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS09520 86d5546f70a1f1c448ffc3afcfefc942 728 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 395 693 3.7E-88 T 28-03-2018 IPR006500 DNA primase, phage/plasmid CJD35_RS09520 86d5546f70a1f1c448ffc3afcfefc942 728 SMART SM00885 310 445 3.4E-33 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CJD35_RS09520 86d5546f70a1f1c448ffc3afcfefc942 728 SUPERFAMILY SSF56747 33 189 1.37E-25 T 28-03-2018 CJD35_RS09520 86d5546f70a1f1c448ffc3afcfefc942 728 Pfam PF09250 Bifunctional DNA primase/polymerase, N-terminal 34 177 3.5E-33 T 28-03-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal CJD35_RS09520 86d5546f70a1f1c448ffc3afcfefc942 728 Pfam PF08706 D5 N terminal like 312 442 3.1E-18 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CJD35_RS09520 86d5546f70a1f1c448ffc3afcfefc942 728 SUPERFAMILY SSF52540 471 602 1.13E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09520 86d5546f70a1f1c448ffc3afcfefc942 728 SMART SM00943 29 178 1.9E-39 T 28-03-2018 IPR015330 DNA primase/polymerase, bifunctional, N-terminal CJD35_RS09520 86d5546f70a1f1c448ffc3afcfefc942 728 Gene3D G3DSA:3.40.50.300 418 637 1.2E-12 T 28-03-2018 CJD35_RS09330 8ca931b522d0c5b7f94836ee7a9124be 160 Gene3D G3DSA:1.10.10.10 2 160 7.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS09330 8ca931b522d0c5b7f94836ee7a9124be 160 Pfam PF01638 HxlR-like helix-turn-helix 21 105 1.7E-21 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type CJD35_RS09330 8ca931b522d0c5b7f94836ee7a9124be 160 SUPERFAMILY SSF46785 10 144 1.55E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10475 391bf5b7c8b7235f24dd11968c136742 428 SUPERFAMILY SSF53067 199 390 5.73E-33 T 28-03-2018 CJD35_RS10475 391bf5b7c8b7235f24dd11968c136742 428 Gene3D G3DSA:3.30.420.40 7 128 1.4E-25 T 28-03-2018 CJD35_RS10475 391bf5b7c8b7235f24dd11968c136742 428 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 10 390 8.4E-81 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CJD35_RS10475 391bf5b7c8b7235f24dd11968c136742 428 PIRSF PIRSF003101 1 423 6.1E-108 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CJD35_RS10475 391bf5b7c8b7235f24dd11968c136742 428 Pfam PF02491 SHS2 domain inserted in FTSA 90 161 1.5E-12 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CJD35_RS10475 391bf5b7c8b7235f24dd11968c136742 428 Pfam PF14450 Cell division protein FtsA 207 386 1.4E-17 T 28-03-2018 CJD35_RS10475 391bf5b7c8b7235f24dd11968c136742 428 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 428 22.242 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CJD35_RS10475 391bf5b7c8b7235f24dd11968c136742 428 Gene3D G3DSA:3.90.640.10 235 312 6.0E-19 T 28-03-2018 CJD35_RS10475 391bf5b7c8b7235f24dd11968c136742 428 SUPERFAMILY SSF53067 9 197 1.62E-39 T 28-03-2018 CJD35_RS10475 391bf5b7c8b7235f24dd11968c136742 428 SMART SM00842 10 196 2.3E-67 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CJD35_RS10690 0b16a0e874b8be58a89a7946e4af843c 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 2.3E-53 T 28-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CJD35_RS10690 0b16a0e874b8be58a89a7946e4af843c 232 Gene3D G3DSA:3.30.190.20 150 228 5.1E-21 T 28-03-2018 CJD35_RS10690 0b16a0e874b8be58a89a7946e4af843c 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.9E-99 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CJD35_RS10690 0b16a0e874b8be58a89a7946e4af843c 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 42.977 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CJD35_RS10690 0b16a0e874b8be58a89a7946e4af843c 232 PIRSF PIRSF002155 1 227 2.3E-74 T 28-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS10690 0b16a0e874b8be58a89a7946e4af843c 232 Gene3D G3DSA:3.40.50.790 68 149 2.7E-34 T 28-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CJD35_RS10690 0b16a0e874b8be58a89a7946e4af843c 232 SUPERFAMILY SSF56808 6 225 1.44E-81 T 28-03-2018 IPR023674 Ribosomal protein L1-like CJD35_RS10690 0b16a0e874b8be58a89a7946e4af843c 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 139 - T 28-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS07465 4de116c591c798d2b0f64756d90db777 97 Pfam PF01541 GIY-YIG catalytic domain 4 74 3.3E-9 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS07465 4de116c591c798d2b0f64756d90db777 97 Gene3D G3DSA:3.40.1440.10 2 94 8.6E-14 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS07465 4de116c591c798d2b0f64756d90db777 97 SUPERFAMILY SSF82771 5 89 2.48E-16 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS11265 19477a660a8426b3b202e428ed55da3e 815 Gene3D G3DSA:2.170.130.10 24 161 8.9E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS11265 19477a660a8426b3b202e428ed55da3e 815 SUPERFAMILY SSF56935 26 648 1.8E-111 T 28-03-2018 CJD35_RS11265 19477a660a8426b3b202e428ed55da3e 815 SUPERFAMILY SSF56935 695 815 1.8E-111 T 28-03-2018 CJD35_RS11265 19477a660a8426b3b202e428ed55da3e 815 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 151 1.9E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS11265 19477a660a8426b3b202e428ed55da3e 815 Pfam PF00593 TonB dependent receptor 245 814 2.0E-42 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS11265 19477a660a8426b3b202e428ed55da3e 815 Gene3D G3DSA:2.40.170.20 162 815 2.1E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS00180 60b8749c54fa0029c50d2fded2e059b4 135 SUPERFAMILY SSF46785 23 115 9.48E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS00180 60b8749c54fa0029c50d2fded2e059b4 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 1.8E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS00180 60b8749c54fa0029c50d2fded2e059b4 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 1.8E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS00180 60b8749c54fa0029c50d2fded2e059b4 135 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 1.8E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS00180 60b8749c54fa0029c50d2fded2e059b4 135 SMART SM00347 32 134 1.8E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS00180 60b8749c54fa0029c50d2fded2e059b4 135 Gene3D G3DSA:1.10.10.10 22 132 1.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS00180 60b8749c54fa0029c50d2fded2e059b4 135 Pfam PF12802 MarR family 38 96 6.5E-12 T 28-03-2018 CJD35_RS08260 f79af75cc674a752bcbd1e74eb749005 133 SUPERFAMILY SSF56214 2 129 3.4E-25 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CJD35_RS08260 f79af75cc674a752bcbd1e74eb749005 133 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 97 5.4E-14 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CJD35_RS08260 f79af75cc674a752bcbd1e74eb749005 133 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 84 3.0E-34 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CJD35_RS08260 f79af75cc674a752bcbd1e74eb749005 133 Gene3D G3DSA:3.90.470.20 1 132 2.6E-29 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CJD35_RS08260 f79af75cc674a752bcbd1e74eb749005 133 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 130 3.0E-24 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CJD35_RS08260 f79af75cc674a752bcbd1e74eb749005 133 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 129 3.9E-19 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CJD35_RS08260 f79af75cc674a752bcbd1e74eb749005 133 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 130 23.58 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CJD35_RS15705 77a9c34b274efcd628f4501cbd61eca6 414 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 35 108 2.3E-7 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15705 77a9c34b274efcd628f4501cbd61eca6 414 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 262 388 8.1E-14 T 28-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS15705 77a9c34b274efcd628f4501cbd61eca6 414 Gene3D G3DSA:2.40.110.10 132 219 1.6E-14 T 28-03-2018 CJD35_RS15705 77a9c34b274efcd628f4501cbd61eca6 414 Gene3D G3DSA:1.10.540.10 20 117 9.2E-11 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15705 77a9c34b274efcd628f4501cbd61eca6 414 SUPERFAMILY SSF56645 35 227 1.24E-28 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS15705 77a9c34b274efcd628f4501cbd61eca6 414 PIRSF PIRSF016578 18 411 1.7E-85 T 28-03-2018 CJD35_RS15705 77a9c34b274efcd628f4501cbd61eca6 414 Gene3D G3DSA:1.20.140.10 220 386 7.1E-7 T 28-03-2018 CJD35_RS15705 77a9c34b274efcd628f4501cbd61eca6 414 SUPERFAMILY SSF47203 251 386 2.05E-5 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS13595 77e45f18e36dc62259f642d7ab651155 439 SUPERFAMILY SSF52540 5 160 7.81E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13595 77e45f18e36dc62259f642d7ab651155 439 SUPERFAMILY SSF52540 248 411 1.7E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13595 77e45f18e36dc62259f642d7ab651155 439 SUPERFAMILY SSF52540 100 159 1.7E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13595 77e45f18e36dc62259f642d7ab651155 439 Gene3D G3DSA:3.40.50.300 4 163 4.6E-22 T 28-03-2018 CJD35_RS13595 77e45f18e36dc62259f642d7ab651155 439 SMART SM00487 7 173 2.8E-9 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS13595 77e45f18e36dc62259f642d7ab651155 439 Gene3D G3DSA:3.40.50.300 242 408 5.2E-9 T 28-03-2018 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 SMART SM01096 422 573 2.2E-65 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 SUPERFAMILY SSF56059 128 400 1.75E-106 T 28-03-2018 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 7.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 7.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 379 397 7.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 7.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 7.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 7.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 7.1E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 SUPERFAMILY SSF52440 588 711 1.29E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Gene3D G3DSA:1.10.1030.10 409 563 1.0E-45 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 745 759 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Gene3D G3DSA:3.40.50.20 4 128 6.7E-38 T 28-03-2018 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 SUPERFAMILY SSF52335 971 1107 4.71E-37 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1098 13.073 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Gene3D G3DSA:3.30.470.20 782 970 2.0E-41 T 28-03-2018 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 425 573 1.6E-41 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 9.1E-71 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 709 911 1.4E-32 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 SUPERFAMILY SSF48108 533 575 2.62E-45 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 SUPERFAMILY SSF48108 395 503 2.62E-45 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Pfam PF02142 MGS-like domain 992 1077 1.0E-17 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Gene3D G3DSA:3.30.1490.20 691 781 8.6E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Gene3D G3DSA:3.40.50.1380 971 1109 4.5E-36 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Gene3D G3DSA:3.40.50.20 564 690 1.7E-60 T 28-03-2018 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 SUPERFAMILY SSF52440 1 127 1.25E-48 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1105 13.389 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 874 881 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 Gene3D G3DSA:3.30.470.20 129 402 1.5E-63 T 28-03-2018 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1087 0.0 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 SMART SM00851 991 1077 2.7E-29 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CJD35_RS14855 027511f1c3dd7b0ae5b4d361b8e2c351 1111 SUPERFAMILY SSF56059 709 969 4.42E-100 T 28-03-2018 CJD35_RS13890 57374e928a4e7e05efe67a564bee6fe3 224 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 218 3.4E-88 T 28-03-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CJD35_RS13890 57374e928a4e7e05efe67a564bee6fe3 224 SUPERFAMILY SSF52317 1 218 1.41E-74 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS13890 57374e928a4e7e05efe67a564bee6fe3 224 SMART SM01211 1 220 5.9E-129 T 28-03-2018 CJD35_RS13890 57374e928a4e7e05efe67a564bee6fe3 224 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 218 42.85 T 28-03-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CJD35_RS13890 57374e928a4e7e05efe67a564bee6fe3 224 Gene3D G3DSA:3.40.50.880 1 221 5.1E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS13890 57374e928a4e7e05efe67a564bee6fe3 224 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 203 2.0E-40 T 28-03-2018 CJD35_RS13890 57374e928a4e7e05efe67a564bee6fe3 224 PIRSF PIRSF001586 1 223 1.6E-84 T 28-03-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CJD35_RS03930 8044d70033e0b44ca97518cc7f06698a 239 SUPERFAMILY SSF74653 152 235 3.01E-18 T 28-03-2018 CJD35_RS03930 8044d70033e0b44ca97518cc7f06698a 239 Gene3D G3DSA:3.30.1150.10 73 239 5.8E-15 T 28-03-2018 CJD35_RS03930 8044d70033e0b44ca97518cc7f06698a 239 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 160 236 3.3E-12 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CJD35_RS03930 8044d70033e0b44ca97518cc7f06698a 239 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 159 236 2.6E-14 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 Pfam PF00072 Response regulator receiver domain 538 645 4.2E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 Pfam PF00512 His Kinase A (phospho-acceptor) domain 286 350 5.1E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 Gene3D G3DSA:3.40.50.2300 528 663 2.1E-19 T 28-03-2018 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 491 8.6E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 497 510 8.6E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 8.6E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 8.6E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 SMART SM00387 393 513 1.7E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 Gene3D G3DSA:1.10.287.130 259 348 6.2E-8 T 28-03-2018 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 SUPERFAMILY SSF52172 534 651 2.85E-22 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 Gene3D G3DSA:3.30.565.10 353 513 3.0E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 SUPERFAMILY SSF47384 277 350 1.16E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 511 2.6E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 SMART SM00448 536 646 6.2E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 SMART SM00388 285 352 1.3E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS10525 46b9fd20f6a09e40b943519ef7d85061 663 SUPERFAMILY SSF55874 343 513 5.63E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS02375 0c3c1d46a95ae8215cc8f5f3234f7a62 70 Pfam PF01809 Haemolytic domain 4 69 1.0E-26 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CJD35_RS02375 0c3c1d46a95ae8215cc8f5f3234f7a62 70 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 22.4 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CJD35_RS02375 0c3c1d46a95ae8215cc8f5f3234f7a62 70 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 18 69 9.0E-20 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CJD35_RS02375 0c3c1d46a95ae8215cc8f5f3234f7a62 70 SMART SM01234 2 69 9.2E-39 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CJD35_RS02375 0c3c1d46a95ae8215cc8f5f3234f7a62 70 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 70 1.3E-21 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CJD35_RS14845 09b43a724e643a4c2789eb074e877dd6 212 Gene3D G3DSA:1.20.1540.10 1 202 3.3E-33 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CJD35_RS14845 09b43a724e643a4c2789eb074e877dd6 212 SUPERFAMILY SSF144091 2 206 5.89E-32 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CJD35_RS14845 09b43a724e643a4c2789eb074e877dd6 212 Pfam PF01694 Rhomboid family 53 202 3.9E-31 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 PRINTS PR00992 Alanine racemase signature 201 228 3.1E-40 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 PRINTS PR00992 Alanine racemase signature 346 359 3.1E-40 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 PRINTS PR00992 Alanine racemase signature 292 309 3.1E-40 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 PRINTS PR00992 Alanine racemase signature 163 174 3.1E-40 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 PRINTS PR00992 Alanine racemase signature 271 286 3.1E-40 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 PRINTS PR00992 Alanine racemase signature 129 141 3.1E-40 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 PRINTS PR00992 Alanine racemase signature 31 47 3.1E-40 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 PRINTS PR00992 Alanine racemase signature 254 269 3.1E-40 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 Pfam PF00842 Alanine racemase, C-terminal domain 238 363 3.5E-39 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 Gene3D G3DSA:2.40.37.10 214 372 6.7E-54 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 36 46 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 Hamap MF_01201 Alanine racemase. 6 364 28.78 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 Gene3D G3DSA:3.20.20.10 8 213 1.8E-34 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 SUPERFAMILY SSF51419 13 231 5.67E-53 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 Pfam PF01168 Alanine racemase, N-terminal domain 13 228 2.7E-51 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 SMART SM01005 238 364 1.2E-60 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 TIGRFAM TIGR00492 alr: alanine racemase 12 364 5.8E-65 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17530 bb6cb7ff7efc82be83f5c9c793c3ee6a 377 SUPERFAMILY SSF50621 231 364 6.28E-45 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 SUPERFAMILY SSF48163 282 441 1.57E-28 T 28-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 Gene3D G3DSA:3.40.50.620 3 115 2.6E-33 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 SUPERFAMILY SSF52374 3 300 1.13E-92 T 28-03-2018 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 Gene3D G3DSA:3.40.50.620 116 235 4.8E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 Gene3D G3DSA:1.10.10.350 359 442 3.8E-19 T 28-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 Gene3D G3DSA:1.10.1160.10 236 317 2.6E-16 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 183 193 2.0E-20 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 2.0E-20 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.0E-20 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 2.0E-20 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 PRINTS PR00987 Glutamyl-tRNA synthetase signature 199 207 2.0E-20 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 331 4.6E-94 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 306 3.6E-71 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS03730 ca2ff957932176afab0dd43d239f8f49 442 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 442 24.514 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CJD35_RS18700 8c1fa45d5e6c8886996a042818012fe8 545 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 539 7.4E-130 T 28-03-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 CJD35_RS18700 8c1fa45d5e6c8886996a042818012fe8 545 Pfam PF00999 Sodium/hydrogen exchanger family 8 416 3.1E-68 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.6E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.6E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 6.6E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.6E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.6E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.6E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.2E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.2E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.2E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 SUPERFAMILY SSF51735 1 248 4.71E-73 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 Gene3D G3DSA:3.40.50.720 1 249 5.6E-68 T 28-03-2018 CJD35_RS15965 bdd80f66073b373c47bedd9f38ad6654 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 247 1.2E-50 T 28-03-2018 CJD35_RS12195 10a67f4cd6ab09e0e7261a31482702d2 132 Gene3D G3DSA:2.60.40.1470 7 132 1.1E-45 T 28-03-2018 IPR007474 ApaG domain CJD35_RS12195 10a67f4cd6ab09e0e7261a31482702d2 132 SUPERFAMILY SSF110069 10 130 1.06E-48 T 28-03-2018 IPR007474 ApaG domain CJD35_RS12195 10a67f4cd6ab09e0e7261a31482702d2 132 Pfam PF04379 ApaG domain 24 109 3.0E-35 T 28-03-2018 IPR007474 ApaG domain CJD35_RS12195 10a67f4cd6ab09e0e7261a31482702d2 132 Hamap MF_00791 Protein ApaG [apaG]. 7 132 31.38 T 28-03-2018 IPR023065 Uncharacterised protein family ApaG CJD35_RS09225 bc44994524d4e09fec2f54c13b020c06 149 SUPERFAMILY SSF54565 3 86 1.2E-30 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09225 bc44994524d4e09fec2f54c13b020c06 149 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 80 24.268 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09225 bc44994524d4e09fec2f54c13b020c06 149 TIGRFAM TIGR00002 S16: ribosomal protein bS16 5 82 6.5E-31 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09225 bc44994524d4e09fec2f54c13b020c06 149 Gene3D G3DSA:3.30.1320.10 3 88 1.6E-31 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09225 bc44994524d4e09fec2f54c13b020c06 149 Pfam PF00886 Ribosomal protein S16 9 70 1.1E-25 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03040 74941920e5e3da94bb2cce4233d3139f 319 Pfam PF01430 Hsp33 protein 25 308 3.1E-69 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CJD35_RS03040 74941920e5e3da94bb2cce4233d3139f 319 Gene3D G3DSA:3.90.1280.10 265 314 1.1E-6 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CJD35_RS03040 74941920e5e3da94bb2cce4233d3139f 319 SUPERFAMILY SSF118352 265 315 4.45E-9 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CJD35_RS03040 74941920e5e3da94bb2cce4233d3139f 319 SUPERFAMILY SSF64397 29 272 5.89E-57 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CJD35_RS03040 74941920e5e3da94bb2cce4233d3139f 319 PIRSF PIRSF005261 19 319 1.7E-68 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CJD35_RS03040 74941920e5e3da94bb2cce4233d3139f 319 Gene3D G3DSA:1.10.287.480 217 264 3.7E-14 T 28-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CJD35_RS03040 74941920e5e3da94bb2cce4233d3139f 319 Gene3D G3DSA:3.55.30.10 22 203 2.1E-54 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CJD35_RS20765 3bb5a9f3ac1733f4eb70a0498aee93a8 227 SUPERFAMILY SSF52096 38 151 1.37E-26 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS20765 3bb5a9f3ac1733f4eb70a0498aee93a8 227 Pfam PF00378 Enoyl-CoA hydratase/isomerase 53 151 1.9E-18 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS20765 3bb5a9f3ac1733f4eb70a0498aee93a8 227 Gene3D G3DSA:3.90.226.10 20 151 4.6E-25 T 28-03-2018 CJD35_RS19815 141d551417fd2912bb5c2481f3203b1d 189 Pfam PF13411 MerR HTH family regulatory protein 10 75 2.9E-13 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS19815 141d551417fd2912bb5c2481f3203b1d 189 Gene3D G3DSA:1.10.1660.10 65 134 1.7E-11 T 28-03-2018 CJD35_RS19815 141d551417fd2912bb5c2481f3203b1d 189 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 4.3E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS19815 141d551417fd2912bb5c2481f3203b1d 189 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 10 21 4.3E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS19815 141d551417fd2912bb5c2481f3203b1d 189 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 21 34 4.3E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS19815 141d551417fd2912bb5c2481f3203b1d 189 ProSitePatterns PS00552 MerR-type HTH domain signature. 12 34 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS19815 141d551417fd2912bb5c2481f3203b1d 189 Gene3D G3DSA:1.10.1660.10 5 64 1.7E-18 T 28-03-2018 CJD35_RS19815 141d551417fd2912bb5c2481f3203b1d 189 SUPERFAMILY SSF46955 9 130 6.59E-28 T 28-03-2018 IPR009061 Putative DNA-binding domain CJD35_RS19815 141d551417fd2912bb5c2481f3203b1d 189 SMART SM00422 9 77 5.8E-22 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS19815 141d551417fd2912bb5c2481f3203b1d 189 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 9 145 2.0E-56 T 28-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 6.0E-18 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 Gene3D G3DSA:3.40.50.300 75 205 1.4E-30 T 28-03-2018 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 146 1.6E-15 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 Gene3D G3DSA:2.40.30.10 302 395 2.3E-30 T 28-03-2018 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 SUPERFAMILY SSF52540 9 228 7.71E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 Gene3D G3DSA:3.40.50.300 2 74 8.6E-11 T 28-03-2018 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 4.9E-225 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.203 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 3.1E-31 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.0E-56 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 SUPERFAMILY SSF50447 205 303 8.25E-31 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 Gene3D G3DSA:2.40.30.10 208 301 2.1E-31 T 28-03-2018 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.6E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.6E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.6E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.6E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.6E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08540 66e01d8d5cb3b502e9451698dce2bd3e 396 SUPERFAMILY SSF50465 304 395 1.99E-34 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CJD35_RS09400 f0410f5886379fdaafcc95092ea48327 303 SUPERFAMILY SSF51730 16 293 4.71E-93 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CJD35_RS09400 f0410f5886379fdaafcc95092ea48327 303 Gene3D G3DSA:3.20.20.220 3 296 5.7E-89 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CJD35_RS09400 f0410f5886379fdaafcc95092ea48327 303 Pfam PF02219 Methylenetetrahydrofolate reductase 15 292 5.3E-91 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CJD35_RS09400 f0410f5886379fdaafcc95092ea48327 303 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 20 291 2.5E-101 T 28-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CJD35_RS13565 49bf1818005a65af7703b92e062f4981 93 Gene3D G3DSA:1.10.260.40 10 81 1.5E-10 T 28-03-2018 CJD35_RS13565 49bf1818005a65af7703b92e062f4981 93 SUPERFAMILY SSF47413 17 73 1.44E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 5627 5759 2.2E-6 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 1086 1191 2.6E-6 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 1197 1293 7.1E-9 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 2156 2259 3.9E-9 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49313 7177 7266 3.14E-12 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49384 11989 12087 8.37E-5 T 28-03-2018 IPR008965 Carbohydrate-binding domain GO:0030246 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.680 11987 12107 2.9E-4 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49313 11507 11594 1.02E-6 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF07705 CARDB 4567 4675 4.2E-8 T 28-03-2018 IPR011635 CARDB domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF07705 CARDB 4190 4304 2.2E-7 T 28-03-2018 IPR011635 CARDB domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF07705 CARDB 5516 5625 5.3E-8 T 28-03-2018 IPR011635 CARDB domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF07705 CARDB 3946 4055 2.9E-6 T 28-03-2018 IPR011635 CARDB domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF07705 CARDB 4071 4178 5.6E-8 T 28-03-2018 IPR011635 CARDB domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF07705 CARDB 3822 3927 5.3E-6 T 28-03-2018 IPR011635 CARDB domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF07705 CARDB 4689 4792 4.8E-7 T 28-03-2018 IPR011635 CARDB domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 2905 3006 8.4E-9 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 2260 2364 9.5E-8 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 1834 1933 0.041 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49899 2608 2761 4.05E-10 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.120.10.30 9248 9619 6.8E-10 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 3215 3317 1.1E-5 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 869 977 1.3E-6 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF63829 6610 6802 1.18E-18 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF63829 6832 6847 1.18E-18 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49313 7874 7945 4.87E-9 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49899 1955 2135 1.48E-29 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 8041 8136 4.4E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 11770 11863 1.4E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF50969 9481 9608 2.67E-12 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF50969 9206 9440 2.67E-12 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00089 11510 11594 7.3 T 28-03-2018 IPR022409 PKD/Chitinase domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00089 7955 8039 2.2 T 28-03-2018 IPR022409 PKD/Chitinase domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00089 11775 11861 0.15 T 28-03-2018 IPR022409 PKD/Chitinase domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00089 7683 7768 6.8 T 28-03-2018 IPR022409 PKD/Chitinase domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00089 11239 11326 1.7 T 28-03-2018 IPR022409 PKD/Chitinase domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49313 7267 7356 6.28E-11 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49313 7086 7174 7.38E-11 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49899 1512 1698 6.63E-31 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 11502 11591 1.3E-15 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 7571 7673 9.0E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 11413 11501 1.0E-13 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 7764 7855 1.5E-12 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 11326 11412 2.3E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 7856 7947 1.8E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 7347 7467 3.3E-13 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 7674 7763 8.2E-18 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 11592 11677 4.3E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 7075 7170 2.4E-13 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 7171 7260 4.0E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 11234 11325 9.3E-14 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 7261 7346 4.3E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 11144 11233 1.3E-13 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 11678 11769 1.1E-12 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 7468 7566 1.6E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.120.10.30 6605 6958 1.7E-21 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF05345 Putative Ig domain 7302 7341 3.2E-6 T 28-03-2018 IPR008009 Putative Ig CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF05345 Putative Ig domain 7213 7250 1.0E-5 T 28-03-2018 IPR008009 Putative Ig CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49313 11238 11325 5.49E-8 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.200 1938 2141 5.2E-33 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 4679 4805 5.7E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 3680 3813 2.6E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 3934 4066 3.6E-12 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 3814 3933 2.1E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 5062 5196 8.2E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 4950 5061 2.7E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 4553 4678 1.7E-13 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 5211 5372 2.6E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 4806 4949 2.8E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 5373 5510 5.4E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 9074 9190 0.19 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.640 8566 8652 1.9E-9 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 979 1081 2.7E-6 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 127 229 3.0E-5 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 2798 2904 7.0E-9 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 568 655 7.6E-5 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 230 333 0.013 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 1401 1492 8.1E-7 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 2467 2569 1.6E-10 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 3111 3214 5.7E-8 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 30 126 7.5E-7 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 656 765 3.2E-8 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 1734 1833 2.1E-8 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 2365 2466 3.2E-8 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 1297 1400 2.3E-4 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 3318 3419 1.3E-13 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 766 868 6.4E-13 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.380 3007 3110 6.1E-8 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.1080 8752 8831 1.5E-4 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00736 7683 7772 0.0091 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00736 7179 7269 0.26 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00736 7585 7682 0.049 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00736 7478 7583 0.0092 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00736 7865 7954 0.084 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00736 7087 7178 0.17 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00736 11240 11332 0.18 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00736 11505 11598 0.26 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00736 11684 11775 0.19 T 28-03-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49313 7582 7679 4.71E-5 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49313 7358 7468 5.49E-7 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.200 1493 1708 1.3E-32 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49373 8775 8818 7.85E-5 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 3446 3556 0.0085 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 3573 3679 1.6E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 4321 4428 1.9E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 5522 5626 1.1E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 4201 4304 2.4E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 4076 4181 4.1E-13 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 4448 4552 8.1E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1536 1691 3.3E-25 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 391 533 4.0E-26 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 1973 2129 1.5E-24 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49899 390 563 2.64E-31 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49299 11749 11858 1.83E-8 T 28-03-2018 IPR000601 PKD domain CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49313 7771 7861 2.9E-8 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.500.10 11052 11143 4.9E-23 T 28-03-2018 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49313 11683 11771 6.8E-6 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00560 401 530 1.2E-10 T 28-03-2018 IPR006558 LamG-like jellyroll fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00560 1988 2126 0.0041 T 28-03-2018 IPR006558 LamG-like jellyroll fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SMART SM00560 1549 1689 4.9E-4 T 28-03-2018 IPR006558 LamG-like jellyroll fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.40.10 7948 8038 1.3E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 SUPERFAMILY SSF49313 7681 7769 4.71E-12 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 CJD35_RS12055 3fcd295f0a66223d39677a9357d8c581 12366 Gene3D G3DSA:2.60.120.200 386 567 3.5E-37 T 28-03-2018 CJD35_RS20495 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 93 6.1E-25 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family CJD35_RS20495 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF01609 Transposase DDE domain 112 261 1.0E-25 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS15985 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 93 6.1E-25 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family CJD35_RS15985 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF01609 Transposase DDE domain 112 261 1.0E-25 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS22205 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 93 6.1E-25 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family CJD35_RS22205 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF01609 Transposase DDE domain 112 261 1.0E-25 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS20955 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 93 6.1E-25 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family CJD35_RS20955 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF01609 Transposase DDE domain 112 261 1.0E-25 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS19705 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 93 6.1E-25 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family CJD35_RS19705 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF01609 Transposase DDE domain 112 261 1.0E-25 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS15150 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 93 6.1E-25 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family CJD35_RS15150 630867a27a293359da0ae78d8ddcb97c 273 Pfam PF01609 Transposase DDE domain 112 261 1.0E-25 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS00905 c2f2fa6668a27d8341b79483f6076de9 155 Pfam PF01475 Ferric uptake regulator family 28 142 9.0E-11 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CJD35_RS00905 c2f2fa6668a27d8341b79483f6076de9 155 Gene3D G3DSA:1.10.10.10 1 97 2.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS00905 c2f2fa6668a27d8341b79483f6076de9 155 SUPERFAMILY SSF46785 20 151 1.57E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03935 4d2c042faa40ffd552828fdf5c061fc5 421 Pfam PF04286 Protein of unknown function (DUF445) 56 420 3.5E-94 T 28-03-2018 IPR007383 Protein of unknown function DUF445 CJD35_RS21325 192d0cdbb527ccaf5c2261ab463da69b 189 Pfam PF01965 DJ-1/PfpI family 6 175 1.0E-47 T 28-03-2018 IPR002818 DJ-1/PfpI CJD35_RS21325 192d0cdbb527ccaf5c2261ab463da69b 189 Gene3D G3DSA:3.40.50.880 1 188 2.0E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS21325 192d0cdbb527ccaf5c2261ab463da69b 189 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 176 7.6E-46 T 28-03-2018 IPR006286 Peptidase C56, PfpI CJD35_RS21325 192d0cdbb527ccaf5c2261ab463da69b 189 SUPERFAMILY SSF52317 5 177 6.36E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS18205 192d0cdbb527ccaf5c2261ab463da69b 189 Pfam PF01965 DJ-1/PfpI family 6 175 1.0E-47 T 28-03-2018 IPR002818 DJ-1/PfpI CJD35_RS18205 192d0cdbb527ccaf5c2261ab463da69b 189 Gene3D G3DSA:3.40.50.880 1 188 2.0E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS18205 192d0cdbb527ccaf5c2261ab463da69b 189 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 176 7.6E-46 T 28-03-2018 IPR006286 Peptidase C56, PfpI CJD35_RS18205 192d0cdbb527ccaf5c2261ab463da69b 189 SUPERFAMILY SSF52317 5 177 6.36E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 543 563 8.5E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 459 477 8.5E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 485 509 8.5E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 513 532 8.5E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 602 617 8.5E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 620 642 8.5E-45 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 SUPERFAMILY SSF53474 428 669 6.9E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 20 415 6.2E-87 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 SUPERFAMILY SSF50993 7 423 1.88E-91 T 28-03-2018 CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 Pfam PF00326 Prolyl oligopeptidase family 475 691 3.1E-63 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 Gene3D G3DSA:2.130.10.120 84 404 2.8E-59 T 28-03-2018 CJD35_RS03590 9c8dcc036cc66697c0d7b3e650b18604 695 Gene3D G3DSA:3.40.50.1820 405 690 2.2E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS09455 232b50a957141ef72b52cfdcb554fe54 649 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 113 606 5.1E-235 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CJD35_RS09455 232b50a957141ef72b52cfdcb554fe54 649 ProSitePatterns PS00674 AAA-protein family signature. 304 322 - T 28-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CJD35_RS09455 232b50a957141ef72b52cfdcb554fe54 649 SMART SM00382 197 336 7.3E-25 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS09455 232b50a957141ef72b52cfdcb554fe54 649 Pfam PF06480 FtsH Extracellular 18 102 2.0E-9 T 28-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CJD35_RS09455 232b50a957141ef72b52cfdcb554fe54 649 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 14 622 37.326 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CJD35_RS09455 232b50a957141ef72b52cfdcb554fe54 649 Gene3D G3DSA:3.40.50.300 145 344 1.2E-61 T 28-03-2018 CJD35_RS09455 232b50a957141ef72b52cfdcb554fe54 649 Pfam PF01434 Peptidase family M41 395 605 1.0E-80 T 28-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CJD35_RS09455 232b50a957141ef72b52cfdcb554fe54 649 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 333 1.7E-44 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS09455 232b50a957141ef72b52cfdcb554fe54 649 SUPERFAMILY SSF52540 155 404 6.69E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09455 232b50a957141ef72b52cfdcb554fe54 649 SUPERFAMILY SSF140990 415 611 1.83E-74 T 28-03-2018 CJD35_RS09455 232b50a957141ef72b52cfdcb554fe54 649 Gene3D G3DSA:1.10.8.60 345 427 1.0E-25 T 28-03-2018 CJD35_RS10340 0996898885e50dc3ad5cf7052d0feb45 351 Gene3D G3DSA:2.102.10.10 10 113 2.6E-19 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS10340 0996898885e50dc3ad5cf7052d0feb45 351 Pfam PF00355 Rieske [2Fe-2S] domain 15 96 2.1E-16 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS10340 0996898885e50dc3ad5cf7052d0feb45 351 SUPERFAMILY SSF55961 113 347 2.38E-27 T 28-03-2018 CJD35_RS10340 0996898885e50dc3ad5cf7052d0feb45 351 SUPERFAMILY SSF50022 7 120 1.7E-29 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS10340 0996898885e50dc3ad5cf7052d0feb45 351 Gene3D G3DSA:3.90.380.10 114 349 1.2E-31 T 28-03-2018 CJD35_RS15800 4f17998c5862f5a5675caab7b0fc618f 126 SUPERFAMILY SSF54593 4 125 7.81E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS15800 4f17998c5862f5a5675caab7b0fc618f 126 Gene3D G3DSA:3.10.180.10 3 22 0.2 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS15800 4f17998c5862f5a5675caab7b0fc618f 126 Gene3D G3DSA:3.10.180.10 23 126 9.8E-12 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS07495 018ce46a5304db5127fe8818c95a7c1c 312 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS07495 018ce46a5304db5127fe8818c95a7c1c 312 SMART SM00382 38 218 1.9E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS07495 018ce46a5304db5127fe8818c95a7c1c 312 Gene3D G3DSA:3.40.50.300 9 263 5.7E-64 T 28-03-2018 CJD35_RS07495 018ce46a5304db5127fe8818c95a7c1c 312 Pfam PF00005 ABC transporter 29 171 1.2E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS07495 018ce46a5304db5127fe8818c95a7c1c 312 SUPERFAMILY SSF52540 9 237 2.17E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21605 db48d92db975772ed1ff19321eabfa36 117 SUPERFAMILY SSF46785 2 93 7.03E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21605 db48d92db975772ed1ff19321eabfa36 117 Pfam PF12840 Helix-turn-helix domain 10 69 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21605 db48d92db975772ed1ff19321eabfa36 117 SMART SM00418 8 86 6.6E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS21605 db48d92db975772ed1ff19321eabfa36 117 Gene3D G3DSA:1.10.10.10 1 99 7.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21605 db48d92db975772ed1ff19321eabfa36 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.9E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS21605 db48d92db975772ed1ff19321eabfa36 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.9E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS21605 db48d92db975772ed1ff19321eabfa36 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.9E-6 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS07070 7ecd0ea138f949db35d0908f557f8dda 205 Gene3D G3DSA:3.30.1130.10 72 205 1.0E-50 T 28-03-2018 CJD35_RS07070 7ecd0ea138f949db35d0908f557f8dda 205 SUPERFAMILY SSF55620 19 204 3.41E-69 T 28-03-2018 CJD35_RS07070 7ecd0ea138f949db35d0908f557f8dda 205 Pfam PF01227 GTP cyclohydrolase I 26 203 1.4E-67 T 28-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CJD35_RS07070 7ecd0ea138f949db35d0908f557f8dda 205 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 26 203 8.9E-61 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CJD35_RS07070 7ecd0ea138f949db35d0908f557f8dda 205 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 83 99 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CJD35_RS07070 7ecd0ea138f949db35d0908f557f8dda 205 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 21 204 37.267 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CJD35_RS07070 7ecd0ea138f949db35d0908f557f8dda 205 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 131 141 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CJD35_RS07070 7ecd0ea138f949db35d0908f557f8dda 205 Gene3D G3DSA:1.10.286.10 23 71 5.1E-19 T 28-03-2018 CJD35_RS17020 43a85f28b88ed551cb689da34e952bf8 111 SUPERFAMILY SSF50022 1 107 2.75E-33 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS17020 43a85f28b88ed551cb689da34e952bf8 111 Pfam PF13806 Rieske-like [2Fe-2S] domain 4 101 2.9E-15 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CJD35_RS17020 43a85f28b88ed551cb689da34e952bf8 111 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 102 7.8E-27 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CJD35_RS17020 43a85f28b88ed551cb689da34e952bf8 111 Gene3D G3DSA:2.102.10.10 1 110 1.5E-25 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS06640 6778210ff9585eca8d4596ab09ddf6e6 422 SUPERFAMILY SSF52266 204 411 3.85E-13 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CJD35_RS06640 6778210ff9585eca8d4596ab09ddf6e6 422 Gene3D G3DSA:3.40.50.1110 204 421 1.7E-9 T 28-03-2018 CJD35_RS12340 0ba2e148246d963a76d776cf78c999a8 214 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 214 38.14 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CJD35_RS12340 0ba2e148246d963a76d776cf78c999a8 214 SUPERFAMILY SSF51366 5 211 6.28E-56 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJD35_RS12340 0ba2e148246d963a76d776cf78c999a8 214 Gene3D G3DSA:3.20.20.70 3 214 2.0E-63 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS12340 0ba2e148246d963a76d776cf78c999a8 214 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 6 209 2.7E-42 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CJD35_RS22005 278801c400a78765c1c2423b7167ab22 125 Pfam PF03713 Domain of unknown function (DUF305) 23 117 5.5E-14 T 28-03-2018 IPR005183 Domain of unknown function DUF305 CJD35_RS22005 278801c400a78765c1c2423b7167ab22 125 Gene3D G3DSA:1.20.1260.10 2 120 8.9E-21 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS11795 73623c5a0e06aa8bcd85d258c79df7bd 289 PIRSF PIRSF000103 1 289 2.3E-71 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CJD35_RS11795 73623c5a0e06aa8bcd85d258c79df7bd 289 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 163 5.2E-44 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CJD35_RS11795 73623c5a0e06aa8bcd85d258c79df7bd 289 Gene3D G3DSA:1.10.1040.10 175 289 2.9E-34 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS11795 73623c5a0e06aa8bcd85d258c79df7bd 289 SUPERFAMILY SSF51735 2 164 9.44E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS11795 73623c5a0e06aa8bcd85d258c79df7bd 289 SUPERFAMILY SSF48179 165 287 5.55E-40 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS11795 73623c5a0e06aa8bcd85d258c79df7bd 289 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 285 6.5E-35 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CJD35_RS11795 73623c5a0e06aa8bcd85d258c79df7bd 289 Gene3D G3DSA:3.40.50.720 2 174 4.7E-33 T 28-03-2018 CJD35_RS02265 c72ea834f95175890864dac37b72ae04 189 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 177 6.0E-53 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CJD35_RS02265 c72ea834f95175890864dac37b72ae04 189 Pfam PF01923 Cobalamin adenosyltransferase 7 172 5.4E-58 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CJD35_RS02265 c72ea834f95175890864dac37b72ae04 189 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 183 4.0E-36 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CJD35_RS02265 c72ea834f95175890864dac37b72ae04 189 SUPERFAMILY SSF89028 6 184 4.12E-58 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CJD35_RS02265 c72ea834f95175890864dac37b72ae04 189 Gene3D G3DSA:1.20.1200.10 16 188 1.6E-57 T 28-03-2018 CJD35_RS14800 b7694fe2f3d2998674f69d3fb92d274c 460 Pfam PF02780 Transketolase, C-terminal domain 328 450 2.3E-42 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CJD35_RS14800 b7694fe2f3d2998674f69d3fb92d274c 460 Pfam PF00364 Biotin-requiring enzyme 5 77 1.9E-20 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS14800 b7694fe2f3d2998674f69d3fb92d274c 460 SUPERFAMILY SSF52518 138 327 4.66E-66 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS14800 b7694fe2f3d2998674f69d3fb92d274c 460 SMART SM00861 138 313 8.7E-60 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS14800 b7694fe2f3d2998674f69d3fb92d274c 460 Gene3D G3DSA:3.40.50.970 135 328 7.7E-76 T 28-03-2018 CJD35_RS14800 b7694fe2f3d2998674f69d3fb92d274c 460 SUPERFAMILY SSF51230 3 96 2.22E-27 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS14800 b7694fe2f3d2998674f69d3fb92d274c 460 Pfam PF02779 Transketolase, pyrimidine binding domain 138 312 6.1E-50 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS14800 b7694fe2f3d2998674f69d3fb92d274c 460 Gene3D G3DSA:2.40.50.100 2 81 1.9E-18 T 28-03-2018 CJD35_RS14800 b7694fe2f3d2998674f69d3fb92d274c 460 SUPERFAMILY SSF52922 322 458 3.01E-45 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS14800 b7694fe2f3d2998674f69d3fb92d274c 460 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CJD35_RS14800 b7694fe2f3d2998674f69d3fb92d274c 460 Gene3D G3DSA:3.40.50.920 329 459 4.4E-43 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS01600 b60f175f205dc5ab3e92c408a820d7ed 931 Gene3D G3DSA:1.10.287.1150 58 139 3.0E-19 T 28-03-2018 CJD35_RS01600 b60f175f205dc5ab3e92c408a820d7ed 931 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 771 917 1.9E-49 T 28-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CJD35_RS01600 b60f175f205dc5ab3e92c408a820d7ed 931 SUPERFAMILY SSF52518 558 772 6.67E-50 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS01600 b60f175f205dc5ab3e92c408a820d7ed 931 PIRSF PIRSF000157 13 919 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CJD35_RS01600 b60f175f205dc5ab3e92c408a820d7ed 931 SMART SM00861 575 766 5.6E-55 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS01600 b60f175f205dc5ab3e92c408a820d7ed 931 SUPERFAMILY SSF52518 107 517 1.37E-86 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS01600 b60f175f205dc5ab3e92c408a820d7ed 931 Pfam PF00676 Dehydrogenase E1 component 188 505 4.3E-58 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CJD35_RS01600 b60f175f205dc5ab3e92c408a820d7ed 931 Pfam PF02779 Transketolase, pyrimidine binding domain 575 767 1.1E-63 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS01600 b60f175f205dc5ab3e92c408a820d7ed 931 Gene3D G3DSA:3.40.50.970 140 502 8.1E-90 T 28-03-2018 CJD35_RS01600 b60f175f205dc5ab3e92c408a820d7ed 931 Gene3D G3DSA:3.40.50.970 574 778 1.4E-57 T 28-03-2018 CJD35_RS01600 b60f175f205dc5ab3e92c408a820d7ed 931 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 37 917 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CJD35_RS01860 5fa52df01c22a4c714f156cbad739608 395 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 42 376 1.0E-67 T 28-03-2018 IPR006427 Phage portal protein, HK97 CJD35_RS01860 5fa52df01c22a4c714f156cbad739608 395 Pfam PF04860 Phage portal protein 46 373 4.7E-82 T 28-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein CJD35_RS22310 faf5682d214e1181bc31015002eb79a8 215 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS22310 faf5682d214e1181bc31015002eb79a8 215 SUPERFAMILY SSF52540 2 211 7.33E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS22310 faf5682d214e1181bc31015002eb79a8 215 Gene3D G3DSA:3.40.50.300 1 214 1.0E-39 T 28-03-2018 CJD35_RS22310 faf5682d214e1181bc31015002eb79a8 215 Pfam PF00005 ABC transporter 21 149 1.9E-16 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS22310 faf5682d214e1181bc31015002eb79a8 215 SMART SM00382 30 198 4.6E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS04260 38b15b74e056c86efcda28c0ac4ecb03 785 SUPERFAMILY SSF56935 25 741 4.27E-114 T 28-03-2018 CJD35_RS04260 38b15b74e056c86efcda28c0ac4ecb03 785 SUPERFAMILY SSF56935 769 785 4.27E-114 T 28-03-2018 CJD35_RS04260 38b15b74e056c86efcda28c0ac4ecb03 785 Gene3D G3DSA:2.170.130.10 32 171 1.4E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS04260 38b15b74e056c86efcda28c0ac4ecb03 785 Pfam PF00593 TonB dependent receptor 257 784 4.9E-49 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS04260 38b15b74e056c86efcda28c0ac4ecb03 785 Pfam PF07715 TonB-dependent Receptor Plug Domain 55 162 1.4E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS04260 38b15b74e056c86efcda28c0ac4ecb03 785 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 768 785 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CJD35_RS04260 38b15b74e056c86efcda28c0ac4ecb03 785 Gene3D G3DSA:2.40.170.20 175 785 2.1E-71 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS04090 68878351f6b548a0a4db8e6237699eec 129 SUPERFAMILY SSF54593 1 126 2.48E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS04090 68878351f6b548a0a4db8e6237699eec 129 Gene3D G3DSA:3.10.180.10 1 129 1.7E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS14155 aff22b9ea6628d8911ff6e85254e980d 561 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 6 559 9.8E-282 T 28-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD CJD35_RS14155 aff22b9ea6628d8911ff6e85254e980d 561 SUPERFAMILY SSF52540 11 250 1.24E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14155 aff22b9ea6628d8911ff6e85254e980d 561 Pfam PF12848 ABC transporter 236 304 5.0E-15 T 28-03-2018 IPR032781 ABC-transporter extension domain CJD35_RS14155 aff22b9ea6628d8911ff6e85254e980d 561 SMART SM00382 354 530 1.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS14155 aff22b9ea6628d8911ff6e85254e980d 561 SMART SM00382 35 238 1.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS14155 aff22b9ea6628d8911ff6e85254e980d 561 Pfam PF00005 ABC transporter 346 479 3.0E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS14155 aff22b9ea6628d8911ff6e85254e980d 561 Pfam PF00005 ABC transporter 26 197 2.2E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS14155 aff22b9ea6628d8911ff6e85254e980d 561 Gene3D G3DSA:3.40.50.300 292 553 2.5E-55 T 28-03-2018 CJD35_RS14155 aff22b9ea6628d8911ff6e85254e980d 561 Gene3D G3DSA:3.40.50.300 4 291 3.6E-57 T 28-03-2018 CJD35_RS14155 aff22b9ea6628d8911ff6e85254e980d 561 SUPERFAMILY SSF52540 316 528 8.08E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04965 f329def8fe8591a68bdf75356ccc6c19 407 Pfam PF00589 Phage integrase family 234 372 3.5E-17 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS04965 f329def8fe8591a68bdf75356ccc6c19 407 Gene3D G3DSA:1.10.150.130 89 207 1.6E-18 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS04965 f329def8fe8591a68bdf75356ccc6c19 407 SUPERFAMILY SSF56349 100 384 1.74E-56 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS04965 f329def8fe8591a68bdf75356ccc6c19 407 Pfam PF13356 Arm DNA-binding domain 7 87 1.4E-15 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CJD35_RS04965 f329def8fe8591a68bdf75356ccc6c19 407 Gene3D G3DSA:1.10.443.10 208 383 2.1E-20 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS00715 a78f85832e5e2cc3b70cf4de42c6f422 534 TIGRFAM TIGR00115 tig: trigger factor 11 419 1.6E-128 T 28-03-2018 IPR005215 Trigger factor GO:0015031 CJD35_RS00715 a78f85832e5e2cc3b70cf4de42c6f422 534 Pfam PF05697 Bacterial trigger factor protein (TF) 2 141 7.8E-36 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CJD35_RS00715 a78f85832e5e2cc3b70cf4de42c6f422 534 Gene3D G3DSA:1.10.3120.10 214 396 5.9E-45 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CJD35_RS00715 a78f85832e5e2cc3b70cf4de42c6f422 534 Hamap MF_00303 Trigger factor [tig]. 1 426 20.568 T 28-03-2018 IPR005215 Trigger factor GO:0015031 CJD35_RS00715 a78f85832e5e2cc3b70cf4de42c6f422 534 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 161 239 1.9E-14 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CJD35_RS00715 a78f85832e5e2cc3b70cf4de42c6f422 534 SUPERFAMILY SSF102735 1 132 2.22E-33 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CJD35_RS00715 a78f85832e5e2cc3b70cf4de42c6f422 534 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 420 7.7E-36 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CJD35_RS00715 a78f85832e5e2cc3b70cf4de42c6f422 534 SUPERFAMILY SSF109998 251 436 5.1E-45 T 28-03-2018 IPR027304 Trigger factor/SurA domain CJD35_RS00715 a78f85832e5e2cc3b70cf4de42c6f422 534 SUPERFAMILY SSF54534 98 244 9.23E-33 T 28-03-2018 CJD35_RS00715 a78f85832e5e2cc3b70cf4de42c6f422 534 Gene3D G3DSA:3.30.70.1050 1 117 4.9E-30 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CJD35_RS03625 ae2066aff555e2cf4c165d2e9b920396 214 Pfam PF00398 Ribosomal RNA adenine dimethylase 46 119 7.7E-5 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CJD35_RS03625 ae2066aff555e2cf4c165d2e9b920396 214 SUPERFAMILY SSF53335 28 178 7.78E-21 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS03625 ae2066aff555e2cf4c165d2e9b920396 214 Gene3D G3DSA:3.40.50.150 19 213 1.9E-18 T 28-03-2018 CJD35_RS13855 cc040fd0eb9d94963602397be1cc1b06 236 SUPERFAMILY SSF56784 6 231 1.07E-36 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS13855 cc040fd0eb9d94963602397be1cc1b06 236 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 196 4.3E-22 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CJD35_RS13855 cc040fd0eb9d94963602397be1cc1b06 236 Gene3D G3DSA:3.40.50.1000 5 235 2.9E-23 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS13855 cc040fd0eb9d94963602397be1cc1b06 236 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 5 229 4.8E-42 T 28-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 CJD35_RS13855 cc040fd0eb9d94963602397be1cc1b06 236 Pfam PF02358 Trehalose-phosphatase 8 218 2.2E-40 T 28-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 CJD35_RS10500 f35a051b6eb83a10aa166521a67e1113 123 Gene3D G3DSA:2.40.50.100 1 123 1.3E-48 T 28-03-2018 CJD35_RS10500 f35a051b6eb83a10aa166521a67e1113 123 SUPERFAMILY SSF51230 3 121 1.92E-44 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS10500 f35a051b6eb83a10aa166521a67e1113 123 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 120 3.4E-46 T 28-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CJD35_RS10500 f35a051b6eb83a10aa166521a67e1113 123 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 43 72 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CJD35_RS10500 f35a051b6eb83a10aa166521a67e1113 123 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 121 38.755 T 28-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CJD35_RS10500 f35a051b6eb83a10aa166521a67e1113 123 Pfam PF01597 Glycine cleavage H-protein 3 121 6.7E-46 T 28-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate CJD35_RS15995 5124ee13ea39fee442793386f9c5b425 981 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 15 277 1.9E-63 T 28-03-2018 IPR014059 Conjugative relaxase, N-terminal CJD35_RS15995 5124ee13ea39fee442793386f9c5b425 981 Pfam PF08751 TrwC relaxase 16 279 1.0E-70 T 28-03-2018 IPR014862 TrwC relaxase CJD35_RS15995 5124ee13ea39fee442793386f9c5b425 981 SUPERFAMILY SSF55464 8 297 3.52E-65 T 28-03-2018 CJD35_RS15995 5124ee13ea39fee442793386f9c5b425 981 Gene3D G3DSA:3.40.50.300 381 591 1.6E-15 T 28-03-2018 CJD35_RS15995 5124ee13ea39fee442793386f9c5b425 981 Pfam PF13604 AAA domain 418 594 2.8E-38 T 28-03-2018 CJD35_RS15995 5124ee13ea39fee442793386f9c5b425 981 Gene3D G3DSA:3.40.50.300 619 865 4.4E-4 T 28-03-2018 CJD35_RS15995 5124ee13ea39fee442793386f9c5b425 981 SUPERFAMILY SSF52540 414 550 3.53E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15995 5124ee13ea39fee442793386f9c5b425 981 SUPERFAMILY SSF52540 620 652 1.97E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15995 5124ee13ea39fee442793386f9c5b425 981 SUPERFAMILY SSF52540 740 855 1.97E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15995 5124ee13ea39fee442793386f9c5b425 981 SUPERFAMILY SSF52540 528 585 1.97E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06545 cf40a1e03ed07dd775c61492ce9a4594 205 Pfam PF06505 Activator of aromatic catabolism 14 107 2.7E-29 T 28-03-2018 IPR010523 Activator of aromatic catabolism CJD35_RS06545 cf40a1e03ed07dd775c61492ce9a4594 205 Gene3D G3DSA:3.30.1380.20 17 192 1.1E-33 T 28-03-2018 CJD35_RS06545 cf40a1e03ed07dd775c61492ce9a4594 205 SUPERFAMILY SSF111126 104 181 3.24E-10 T 28-03-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain CJD35_RS06545 cf40a1e03ed07dd775c61492ce9a4594 205 SUPERFAMILY SSF111126 41 74 3.24E-10 T 28-03-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain CJD35_RS06545 cf40a1e03ed07dd775c61492ce9a4594 205 Pfam PF02830 V4R domain 128 186 1.5E-14 T 28-03-2018 IPR004096 4-vinyl reductase, 4VR CJD35_RS06545 cf40a1e03ed07dd775c61492ce9a4594 205 SMART SM00989 124 186 3.5E-19 T 28-03-2018 IPR004096 4-vinyl reductase, 4VR CJD35_RS06545 cf40a1e03ed07dd775c61492ce9a4594 205 ProDom PD485437 REGULATOR TRANSCRIPTIONAL FIS-TYPE HELIX-TURN-HELIX ACTIVATOR PLASMID FAMILY PHENOL-DEGRADATIVE FIS SIGMA-54 10 130 8.0E-24 T 28-03-2018 IPR010523 Activator of aromatic catabolism CJD35_RS10105 ce9aefe2fb1847905cc531382fa22552 238 Gene3D G3DSA:1.10.10.10 129 237 2.1E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10105 ce9aefe2fb1847905cc531382fa22552 238 Pfam PF00072 Response regulator receiver domain 8 116 1.8E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS10105 ce9aefe2fb1847905cc531382fa22552 238 SUPERFAMILY SSF46894 134 232 1.25E-22 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS10105 ce9aefe2fb1847905cc531382fa22552 238 SMART SM00862 156 231 8.9E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS10105 ce9aefe2fb1847905cc531382fa22552 238 Gene3D G3DSA:3.40.50.2300 3 128 1.7E-27 T 28-03-2018 CJD35_RS10105 ce9aefe2fb1847905cc531382fa22552 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.6E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS10105 ce9aefe2fb1847905cc531382fa22552 238 SMART SM00448 6 116 2.5E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS10105 ce9aefe2fb1847905cc531382fa22552 238 SUPERFAMILY SSF52172 5 129 2.13E-30 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS14320 33a94ea3ca24902c39f2d27eb266c860 695 Pfam PF13567 Domain of unknown function (DUF4131) 43 193 4.4E-13 T 28-03-2018 IPR025405 Domain of unknown function DUF4131 CJD35_RS14320 33a94ea3ca24902c39f2d27eb266c860 695 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 250 443 2.9E-21 T 28-03-2018 IPR004477 ComEC/Rec2-related protein CJD35_RS14320 33a94ea3ca24902c39f2d27eb266c860 695 Pfam PF03772 Competence protein 229 511 6.5E-55 T 28-03-2018 IPR004477 ComEC/Rec2-related protein CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 252 1.7E-54 T 28-03-2018 CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 SUPERFAMILY SSF51735 6 254 9.3E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 1.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 1.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 Gene3D G3DSA:3.40.50.720 1 262 3.8E-62 T 28-03-2018 CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 9.7E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 9.7E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15855 d276ab7b726b5c179f206eb83273e8a7 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.7E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS05475 6ce685d4a2a2caf12c5a1adb2c4964b0 143 Pfam PF03960 ArsC family 8 115 2.5E-20 T 28-03-2018 IPR006660 Arsenate reductase-like CJD35_RS05475 6ce685d4a2a2caf12c5a1adb2c4964b0 143 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 9.8E-44 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CJD35_RS05475 6ce685d4a2a2caf12c5a1adb2c4964b0 143 Gene3D G3DSA:3.40.30.10 2 142 1.4E-45 T 28-03-2018 CJD35_RS05475 6ce685d4a2a2caf12c5a1adb2c4964b0 143 SUPERFAMILY SSF52833 4 138 1.31E-40 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 Hamap MF_00235 Adenylate kinase [adk]. 1 214 46.095 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 PRINTS PR00094 Adenylate kinase signature 32 46 3.6E-31 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 PRINTS PR00094 Adenylate kinase signature 4 17 3.6E-31 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 PRINTS PR00094 Adenylate kinase signature 81 97 3.6E-31 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 PRINTS PR00094 Adenylate kinase signature 161 176 3.6E-31 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 PRINTS PR00094 Adenylate kinase signature 178 192 3.6E-31 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 28-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 Pfam PF05191 Adenylate kinase, active site lid 127 163 2.0E-13 T 28-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 SUPERFAMILY SSF52540 1 198 2.34E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 1.6E-73 T 28-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 Pfam PF00406 Adenylate kinase 5 191 9.7E-52 T 28-03-2018 CJD35_RS08655 24c2707ac8a3efd313491ec8d1fb56bb 218 Gene3D G3DSA:3.40.50.300 1 216 2.8E-54 T 28-03-2018 CJD35_RS04080 7b6774db8ad1d08954c9816b45149498 129 Gene3D G3DSA:3.10.490.10 1 128 4.0E-28 T 28-03-2018 CJD35_RS04080 7b6774db8ad1d08954c9816b45149498 129 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 6 126 7.4E-24 T 28-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CJD35_RS04080 7b6774db8ad1d08954c9816b45149498 129 SUPERFAMILY SSF110857 5 127 4.19E-25 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like CJD35_RS01300 8da69025c2b6a36e71f57f03cfa1575b 509 PRINTS PR00095 Anthranilate synthase component I signature 429 443 1.8E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CJD35_RS01300 8da69025c2b6a36e71f57f03cfa1575b 509 PRINTS PR00095 Anthranilate synthase component I signature 335 348 1.8E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CJD35_RS01300 8da69025c2b6a36e71f57f03cfa1575b 509 PRINTS PR00095 Anthranilate synthase component I signature 349 362 1.8E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CJD35_RS01300 8da69025c2b6a36e71f57f03cfa1575b 509 PRINTS PR00095 Anthranilate synthase component I signature 444 458 1.8E-22 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CJD35_RS01300 8da69025c2b6a36e71f57f03cfa1575b 509 Pfam PF00425 chorismate binding enzyme 236 487 2.1E-93 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CJD35_RS01300 8da69025c2b6a36e71f57f03cfa1575b 509 SUPERFAMILY SSF56322 22 494 6.67E-149 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CJD35_RS01300 8da69025c2b6a36e71f57f03cfa1575b 509 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 30 494 1.3E-159 T 28-03-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CJD35_RS01300 8da69025c2b6a36e71f57f03cfa1575b 509 Pfam PF04715 Anthranilate synthase component I, N terminal region 31 176 1.4E-25 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CJD35_RS01300 8da69025c2b6a36e71f57f03cfa1575b 509 Gene3D G3DSA:3.60.120.10 20 499 4.0E-153 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CJD35_RS15610 b80de6c0b9e95a8b47b8431f88b35a23 152 SUPERFAMILY SSF54637 13 149 1.6E-9 T 28-03-2018 IPR029069 HotDog domain CJD35_RS15610 b80de6c0b9e95a8b47b8431f88b35a23 152 Gene3D G3DSA:3.10.129.10 10 149 6.0E-8 T 28-03-2018 CJD35_RS14150 577f8ee0e4defb314b905ea57baae409 274 Pfam PF01936 NYN domain 11 143 4.1E-26 T 28-03-2018 IPR021139 NYN domain, limkain-b1-type CJD35_RS14150 577f8ee0e4defb314b905ea57baae409 274 Pfam PF12872 OST-HTH/LOTUS domain 199 269 1.8E-13 T 28-03-2018 IPR025605 OST-HTH/LOTUS domain CJD35_RS14150 577f8ee0e4defb314b905ea57baae409 274 Gene3D G3DSA:3.40.50.1010 2 147 1.3E-18 T 28-03-2018 IPR029060 PIN domain-like CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 125 287 9.3E-65 T 28-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 Gene3D G3DSA:3.40.50.720 140 270 8.3E-36 T 28-03-2018 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 SUPERFAMILY SSF53223 5 123 3.55E-38 T 28-03-2018 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 266 274 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 122 1.1E-37 T 28-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 Hamap MF_01576 Bifunctional protein FolD [folD]. 4 289 36.98 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 Gene3D G3DSA:3.40.50.10860 12 139 5.5E-46 T 28-03-2018 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 SUPERFAMILY SSF51735 124 286 4.96E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 35 57 1.0E-76 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 245 261 1.0E-76 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 76 103 1.0E-76 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 111 132 1.0E-76 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 262 280 1.0E-76 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 1.0E-76 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS07555 14440954c46f8b801255b9ebf789f907 297 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 156 176 1.0E-76 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS08840 e6c53df096acfdabb7c94e0ab03a40b8 425 Pfam PF02441 Flavoprotein 4 175 2.2E-47 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CJD35_RS08840 e6c53df096acfdabb7c94e0ab03a40b8 425 Gene3D G3DSA:3.40.50.10300 201 425 1.2E-65 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CJD35_RS08840 e6c53df096acfdabb7c94e0ab03a40b8 425 SUPERFAMILY SSF102645 210 420 6.93E-74 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CJD35_RS08840 e6c53df096acfdabb7c94e0ab03a40b8 425 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 210 391 5.4E-71 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CJD35_RS08840 e6c53df096acfdabb7c94e0ab03a40b8 425 Gene3D G3DSA:3.40.50.1950 1 187 3.5E-59 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CJD35_RS08840 e6c53df096acfdabb7c94e0ab03a40b8 425 SUPERFAMILY SSF52507 4 176 9.81E-62 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CJD35_RS13655 22da0ea33b746aaedd96b023ace27003 420 ProDom PD140702 CAPSID COAT GP5 DIRECT LATE STRUCTURAL SEQUENCING 13 413 1.0E-26 T 28-03-2018 CJD35_RS13655 22da0ea33b746aaedd96b023ace27003 420 Pfam PF11651 P22 coat protein - gene protein 5 1 418 1.1E-101 T 28-03-2018 IPR024659 Major capsid protein Gp5 CJD35_RS00160 e41c5df3500bc4d76027c554d718b73c 455 Pfam PF04055 Radical SAM superfamily 146 329 3.5E-26 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS00160 e41c5df3500bc4d76027c554d718b73c 455 Gene3D G3DSA:2.40.50.140 386 455 1.4E-15 T 28-03-2018 CJD35_RS00160 e41c5df3500bc4d76027c554d718b73c 455 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 9 454 58.279 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CJD35_RS00160 e41c5df3500bc4d76027c554d718b73c 455 Pfam PF00919 Uncharacterized protein family UPF0004 10 101 4.0E-21 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CJD35_RS00160 e41c5df3500bc4d76027c554d718b73c 455 SUPERFAMILY SSF102114 130 375 1.15E-45 T 28-03-2018 CJD35_RS00160 e41c5df3500bc4d76027c554d718b73c 455 SMART SM00729 140 371 1.4E-50 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS00160 e41c5df3500bc4d76027c554d718b73c 455 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 10 452 9.7E-162 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CJD35_RS00160 e41c5df3500bc4d76027c554d718b73c 455 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 10 452 9.3E-97 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CJD35_RS00160 e41c5df3500bc4d76027c554d718b73c 455 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CJD35_RS00160 e41c5df3500bc4d76027c554d718b73c 455 Gene3D G3DSA:3.80.30.20 137 385 9.5E-40 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CJD35_RS22195 2496883a043f1fb98951ceae0d820a48 216 Gene3D G3DSA:3.40.50.150 4 207 3.8E-17 T 28-03-2018 CJD35_RS22195 2496883a043f1fb98951ceae0d820a48 216 Pfam PF08241 Methyltransferase domain 45 139 2.5E-10 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CJD35_RS22195 2496883a043f1fb98951ceae0d820a48 216 SUPERFAMILY SSF53335 31 195 9.19E-21 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS14385 67f828d803b8884888822c1ed9d33680 521 Pfam PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus 65 123 1.0E-5 T 28-03-2018 IPR000260 NADH:ubiquinone oxidoreductase chain 4, N-terminal GO:0006120|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14385 67f828d803b8884888822c1ed9d33680 521 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 7 479 1.2E-180 T 28-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14385 67f828d803b8884888822c1ed9d33680 521 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 8.2E-49 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14385 67f828d803b8884888822c1ed9d33680 521 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 8.2E-49 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14385 67f828d803b8884888822c1ed9d33680 521 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 8.2E-49 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14385 67f828d803b8884888822c1ed9d33680 521 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 8.2E-49 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14385 67f828d803b8884888822c1ed9d33680 521 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 8.2E-49 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14385 67f828d803b8884888822c1ed9d33680 521 Pfam PF00361 Proton-conducting membrane transporter 128 415 3.0E-84 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS17595 3341e5bf0473358e592f5352186377fc 361 SUPERFAMILY SSF51735 161 324 2.54E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS17595 3341e5bf0473358e592f5352186377fc 361 SUPERFAMILY SSF50129 5 194 4.41E-56 T 28-03-2018 IPR011032 GroES-like CJD35_RS17595 3341e5bf0473358e592f5352186377fc 361 Gene3D G3DSA:3.90.180.10 2 191 1.8E-51 T 28-03-2018 CJD35_RS17595 3341e5bf0473358e592f5352186377fc 361 Gene3D G3DSA:3.40.50.720 192 302 5.9E-19 T 28-03-2018 CJD35_RS17595 3341e5bf0473358e592f5352186377fc 361 SMART SM00829 13 357 0.0011 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS17595 3341e5bf0473358e592f5352186377fc 361 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CJD35_RS17595 3341e5bf0473358e592f5352186377fc 361 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 122 1.5E-23 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS17595 3341e5bf0473358e592f5352186377fc 361 Pfam PF00107 Zinc-binding dehydrogenase 199 306 1.2E-13 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS14140 04b84f1b0e7e7b8906b625f0f040b53d 323 SUPERFAMILY SSF102114 42 306 1.7E-59 T 28-03-2018 CJD35_RS14140 04b84f1b0e7e7b8906b625f0f040b53d 323 Gene3D G3DSA:3.20.20.70 34 313 1.1E-21 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS14140 04b84f1b0e7e7b8906b625f0f040b53d 323 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 24 65 4.6E-7 T 28-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CJD35_RS14140 04b84f1b0e7e7b8906b625f0f040b53d 323 Pfam PF04055 Radical SAM superfamily 83 242 3.7E-12 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS14140 04b84f1b0e7e7b8906b625f0f040b53d 323 Hamap MF_00206 Lipoyl synthase [lipA]. 1 315 145.397 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CJD35_RS14140 04b84f1b0e7e7b8906b625f0f040b53d 323 TIGRFAM TIGR00510 lipA: lipoyl synthase 23 312 5.2E-115 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CJD35_RS14140 04b84f1b0e7e7b8906b625f0f040b53d 323 PIRSF PIRSF005963 11 323 1.5E-131 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CJD35_RS14140 04b84f1b0e7e7b8906b625f0f040b53d 323 SMART SM00729 76 285 3.7E-7 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS09490 7dfe68792f5662a7a801bf361e39370d 746 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 8 746 15.971 T 28-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CJD35_RS09490 7dfe68792f5662a7a801bf361e39370d 746 Pfam PF04453 Organic solvent tolerance protein 306 673 1.6E-61 T 28-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CJD35_RS09490 7dfe68792f5662a7a801bf361e39370d 746 Gene3D G3DSA:2.60.450.10 37 200 5.8E-19 T 28-03-2018 CJD35_RS15245 87a7c5d338d163332b0bab924bf7a0d4 132 SUPERFAMILY SSF56276 9 119 5.89E-35 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CJD35_RS15245 87a7c5d338d163332b0bab924bf7a0d4 132 Gene3D G3DSA:3.60.90.10 5 129 5.6E-39 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CJD35_RS15245 87a7c5d338d163332b0bab924bf7a0d4 132 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 8 116 1.1E-36 T 28-03-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CJD35_RS15245 87a7c5d338d163332b0bab924bf7a0d4 132 Pfam PF02675 S-adenosylmethionine decarboxylase 11 116 2.1E-35 T 28-03-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CJD35_RS15245 87a7c5d338d163332b0bab924bf7a0d4 132 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 5 120 26.472 T 28-03-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 334 442 5.0E-28 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 Gene3D G3DSA:3.50.50.60 268 344 1.2E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 33 43 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 Gene3D G3DSA:3.50.50.60 1 41 5.9E-4 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 SUPERFAMILY SSF55424 334 456 5.5E-33 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 SUPERFAMILY SSF51905 1 367 2.41E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 166 184 1.6E-35 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 145 1.6E-35 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 1 20 1.6E-35 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 279 301 1.6E-35 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 266 1.6E-35 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 TIGRFAM TIGR02053 MerA: mercury(II) reductase 1 458 2.9E-157 T 28-03-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 Gene3D G3DSA:1.10.287.990 42 97 3.7E-15 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 Gene3D G3DSA:3.50.50.60 132 267 3.0E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 417 437 5.9E-51 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 130 139 5.9E-51 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 251 265 5.9E-51 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 294 301 5.9E-51 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 32 47 5.9E-51 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 166 191 5.9E-51 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 330 351 5.9E-51 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 395 410 5.9E-51 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 PIRSF PIRSF000350 1 458 7.6E-160 T 28-03-2018 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 Gene3D G3DSA:3.30.390.30 345 458 2.4E-34 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS20550 01a1096e9e3334f0c657af79427c51b1 458 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 314 6.3E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS03360 61b4b509f1b7893c38e29cc24de4bf0f 414 Gene3D G3DSA:3.20.20.70 5 311 1.4E-32 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS03360 61b4b509f1b7893c38e29cc24de4bf0f 414 SMART SM00729 59 286 0.0087 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS03360 61b4b509f1b7893c38e29cc24de4bf0f 414 Gene3D G3DSA:1.10.150.320 322 387 0.0012 T 28-03-2018 CJD35_RS03360 61b4b509f1b7893c38e29cc24de4bf0f 414 SUPERFAMILY SSF102114 48 203 5.76E-14 T 28-03-2018 CJD35_RS03360 61b4b509f1b7893c38e29cc24de4bf0f 414 SUPERFAMILY SSF47781 313 385 9.23E-10 T 28-03-2018 IPR010994 RuvA domain 2-like CJD35_RS03360 61b4b509f1b7893c38e29cc24de4bf0f 414 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 7 405 7.0E-171 T 28-03-2018 IPR023874 DNA modification/repair radical SAM protein, putative CJD35_RS07100 fc602f9db8aaa75e15d143a8912bba2e 223 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 188 7.7E-9 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS07100 fc602f9db8aaa75e15d143a8912bba2e 223 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 51 188 6.4E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CJD35_RS07100 fc602f9db8aaa75e15d143a8912bba2e 223 SUPERFAMILY SSF56784 8 204 7.04E-33 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS07100 fc602f9db8aaa75e15d143a8912bba2e 223 TIGRFAM TIGR01993 Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 9 187 4.1E-55 T 28-03-2018 IPR010237 Pyrimidine 5-nucleotidase CJD35_RS07100 fc602f9db8aaa75e15d143a8912bba2e 223 Gene3D G3DSA:3.40.50.1000 5 218 1.2E-23 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS14440 e45712c5cd917c87a0f2a7053d4f58a3 184 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 26 177 39.819 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14440 e45712c5cd917c87a0f2a7053d4f58a3 184 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14440 e45712c5cd917c87a0f2a7053d4f58a3 184 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 37 178 4.4E-73 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14440 e45712c5cd917c87a0f2a7053d4f58a3 184 Gene3D G3DSA:3.40.50.700 37 180 1.1E-45 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14440 e45712c5cd917c87a0f2a7053d4f58a3 184 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 63 172 2.6E-23 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14440 e45712c5cd917c87a0f2a7053d4f58a3 184 SUPERFAMILY SSF56770 35 178 2.75E-65 T 28-03-2018 CJD35_RS12870 a36f24b53c5264a864ddd5fe238be3ef 331 SUPERFAMILY SSF56281 6 309 2.1E-63 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS12870 a36f24b53c5264a864ddd5fe238be3ef 331 TIGRFAM TIGR04122 Xnuc_lig_assoc: putative exonuclease, DNA ligase-associated 4 326 1.1E-136 T 28-03-2018 IPR026360 Putative exonuclease, DNA ligase-associated CJD35_RS12870 a36f24b53c5264a864ddd5fe238be3ef 331 Gene3D G3DSA:3.60.15.10 25 203 3.4E-27 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS12870 a36f24b53c5264a864ddd5fe238be3ef 331 SMART SM00849 8 170 0.0076 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS21295 7b17d3435d5c865042b205e51be27668 152 SUPERFAMILY SSF54593 1 137 2.01E-30 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS21295 7b17d3435d5c865042b205e51be27668 152 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 130 3.0E-14 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS21295 7b17d3435d5c865042b205e51be27668 152 Gene3D G3DSA:3.10.180.10 1 151 2.8E-32 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS18175 7b17d3435d5c865042b205e51be27668 152 SUPERFAMILY SSF54593 1 137 2.01E-30 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS18175 7b17d3435d5c865042b205e51be27668 152 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 130 3.0E-14 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS18175 7b17d3435d5c865042b205e51be27668 152 Gene3D G3DSA:3.10.180.10 1 151 2.8E-32 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS05070 b84d28c5da16fc010f6feec00edc1349 580 Gene3D G3DSA:3.60.20.10 54 198 3.4E-10 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS05070 b84d28c5da16fc010f6feec00edc1349 580 SUPERFAMILY SSF56235 72 196 8.3E-8 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS05070 b84d28c5da16fc010f6feec00edc1349 580 Pfam PF00733 Asparagine synthase 216 347 2.4E-9 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CJD35_RS05070 b84d28c5da16fc010f6feec00edc1349 580 Pfam PF00733 Asparagine synthase 463 576 4.9E-9 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CJD35_RS05070 b84d28c5da16fc010f6feec00edc1349 580 SUPERFAMILY SSF52402 453 553 2.71E-32 T 28-03-2018 CJD35_RS05070 b84d28c5da16fc010f6feec00edc1349 580 SUPERFAMILY SSF52402 207 354 2.71E-32 T 28-03-2018 CJD35_RS05070 b84d28c5da16fc010f6feec00edc1349 580 Gene3D G3DSA:3.40.50.620 201 572 9.4E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS13185 bcc5d4c61de492a1868d90ba365771a5 257 Gene3D G3DSA:3.20.20.140 1 256 3.9E-79 T 28-03-2018 CJD35_RS13185 bcc5d4c61de492a1868d90ba365771a5 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CJD35_RS13185 bcc5d4c61de492a1868d90ba365771a5 257 SUPERFAMILY SSF51556 2 254 5.21E-86 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS13185 bcc5d4c61de492a1868d90ba365771a5 257 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CJD35_RS13185 bcc5d4c61de492a1868d90ba365771a5 257 Pfam PF01026 TatD related DNase 3 254 2.0E-80 T 28-03-2018 IPR001130 TatD family GO:0016788 CJD35_RS13185 bcc5d4c61de492a1868d90ba365771a5 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 3.3E-83 T 28-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CJD35_RS13185 bcc5d4c61de492a1868d90ba365771a5 257 PIRSF PIRSF005902 1 257 7.7E-76 T 28-03-2018 IPR001130 TatD family GO:0016788 CJD35_RS13185 bcc5d4c61de492a1868d90ba365771a5 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CJD35_RS06660 5fda46e4080e61e91402b47f0590e7f1 374 Pfam PF00534 Glycosyl transferases group 1 196 343 2.3E-29 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS06660 5fda46e4080e61e91402b47f0590e7f1 374 Gene3D G3DSA:3.40.50.2000 188 350 1.2E-36 T 28-03-2018 CJD35_RS06660 5fda46e4080e61e91402b47f0590e7f1 374 Gene3D G3DSA:3.40.50.2000 1 187 2.0E-17 T 28-03-2018 CJD35_RS06660 5fda46e4080e61e91402b47f0590e7f1 374 Pfam PF13439 Glycosyltransferase Family 4 13 174 3.1E-17 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS06660 5fda46e4080e61e91402b47f0590e7f1 374 SUPERFAMILY SSF53756 1 364 3.93E-70 T 28-03-2018 CJD35_RS15230 bcaf348df00311c6bacfa3936f953037 273 SUPERFAMILY SSF56112 12 245 8.59E-25 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS15230 bcaf348df00311c6bacfa3936f953037 273 Gene3D G3DSA:1.10.510.10 34 261 1.5E-14 T 28-03-2018 CJD35_RS15230 bcaf348df00311c6bacfa3936f953037 273 Pfam PF01636 Phosphotransferase enzyme family 13 217 1.1E-14 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CJD35_RS12010 e8d779e34e4753da957686253ad1d4c3 70 Pfam PF09866 Uncharacterized protein conserved in bacteria (DUF2093) 19 58 6.2E-21 T 28-03-2018 IPR018661 Protein of unknown function DUF2093 CJD35_RS10425 b7f895f4d3b466fc3ae4b08ad5c7c9b2 463 Pfam PF02875 Mur ligase family, glutamate ligase domain 322 397 1.2E-9 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CJD35_RS10425 b7f895f4d3b466fc3ae4b08ad5c7c9b2 463 Gene3D G3DSA:3.90.190.20 316 463 5.8E-36 T 28-03-2018 CJD35_RS10425 b7f895f4d3b466fc3ae4b08ad5c7c9b2 463 SUPERFAMILY SSF53244 324 453 3.97E-30 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CJD35_RS10425 b7f895f4d3b466fc3ae4b08ad5c7c9b2 463 Pfam PF08245 Mur ligase middle domain 103 295 3.3E-45 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS10425 b7f895f4d3b466fc3ae4b08ad5c7c9b2 463 Pfam PF01225 Mur ligase family, catalytic domain 24 76 3.5E-10 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CJD35_RS10425 b7f895f4d3b466fc3ae4b08ad5c7c9b2 463 Gene3D G3DSA:3.40.1190.10 88 312 5.7E-49 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS10425 b7f895f4d3b466fc3ae4b08ad5c7c9b2 463 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 5 454 30.9 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10425 b7f895f4d3b466fc3ae4b08ad5c7c9b2 463 SUPERFAMILY SSF53623 99 314 5.23E-47 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS10425 b7f895f4d3b466fc3ae4b08ad5c7c9b2 463 SUPERFAMILY SSF63418 9 93 5.23E-21 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CJD35_RS10425 b7f895f4d3b466fc3ae4b08ad5c7c9b2 463 Gene3D G3DSA:3.40.1390.10 4 87 4.6E-23 T 28-03-2018 CJD35_RS10425 b7f895f4d3b466fc3ae4b08ad5c7c9b2 463 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 453 2.5E-109 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS16175 414cc187304b1428bd911e5cc7e40216 130 SUPERFAMILY SSF46785 23 128 1.44E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16175 414cc187304b1428bd911e5cc7e40216 130 Gene3D G3DSA:1.10.10.10 11 130 7.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02975 d4875c0b3783f3ad2282aea18dce45cb 283 Gene3D G3DSA:1.20.5.100 247 280 6.5E-10 T 28-03-2018 CJD35_RS02975 d4875c0b3783f3ad2282aea18dce45cb 283 Pfam PF02167 Cytochrome C1 family 50 278 2.0E-88 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CJD35_RS02975 d4875c0b3783f3ad2282aea18dce45cb 283 PRINTS PR00603 Cytochrome C1 signature 226 245 5.9E-51 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CJD35_RS02975 d4875c0b3783f3ad2282aea18dce45cb 283 PRINTS PR00603 Cytochrome C1 signature 148 172 5.9E-51 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CJD35_RS02975 d4875c0b3783f3ad2282aea18dce45cb 283 PRINTS PR00603 Cytochrome C1 signature 245 260 5.9E-51 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CJD35_RS02975 d4875c0b3783f3ad2282aea18dce45cb 283 PRINTS PR00603 Cytochrome C1 signature 115 135 5.9E-51 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CJD35_RS02975 d4875c0b3783f3ad2282aea18dce45cb 283 PRINTS PR00603 Cytochrome C1 signature 48 67 5.9E-51 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CJD35_RS02975 d4875c0b3783f3ad2282aea18dce45cb 283 PRINTS PR00603 Cytochrome C1 signature 68 87 5.9E-51 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CJD35_RS02975 d4875c0b3783f3ad2282aea18dce45cb 283 PRINTS PR00603 Cytochrome C1 signature 193 204 5.9E-51 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CJD35_RS02975 d4875c0b3783f3ad2282aea18dce45cb 283 Gene3D G3DSA:1.10.760.10 39 245 2.6E-66 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS02975 d4875c0b3783f3ad2282aea18dce45cb 283 SUPERFAMILY SSF46626 42 244 4.39E-55 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS11800 8ae559adbed5fbbb6965f6114a7107d5 415 Gene3D G3DSA:3.40.50.1100 40 150 5.5E-30 T 28-03-2018 CJD35_RS11800 8ae559adbed5fbbb6965f6114a7107d5 415 Gene3D G3DSA:3.30.70.260 335 414 5.7E-8 T 28-03-2018 CJD35_RS11800 8ae559adbed5fbbb6965f6114a7107d5 415 Gene3D G3DSA:3.40.50.1100 151 321 3.9E-40 T 28-03-2018 CJD35_RS11800 8ae559adbed5fbbb6965f6114a7107d5 415 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 34 409 8.0E-123 T 28-03-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CJD35_RS11800 8ae559adbed5fbbb6965f6114a7107d5 415 SUPERFAMILY SSF53686 16 362 1.01E-92 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS11800 8ae559adbed5fbbb6965f6114a7107d5 415 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 314 1.9E-75 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS00165 4370b4033ddb7a6d5581410b937346b4 278 Gene3D G3DSA:3.90.640.20 172 276 7.2E-6 T 28-03-2018 IPR021729 Domain of unknown function DUF3298 CJD35_RS00165 4370b4033ddb7a6d5581410b937346b4 278 Pfam PF13739 Domain of unknown function (DUF4163) 64 154 1.1E-14 T 28-03-2018 IPR025303 Deacetylase PdaC CJD35_RS00165 4370b4033ddb7a6d5581410b937346b4 278 Gene3D G3DSA:3.30.565.40 58 168 1.3E-16 T 28-03-2018 CJD35_RS18380 084ead7ddda6913b92da1568e86fae38 71 SMART SM00357 5 70 6.4E-17 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CJD35_RS18380 084ead7ddda6913b92da1568e86fae38 71 Gene3D G3DSA:2.40.50.140 1 71 1.1E-21 T 28-03-2018 CJD35_RS18380 084ead7ddda6913b92da1568e86fae38 71 PRINTS PR00050 Cold shock protein signature 42 60 1.9E-10 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS18380 084ead7ddda6913b92da1568e86fae38 71 PRINTS PR00050 Cold shock protein signature 27 36 1.9E-10 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS18380 084ead7ddda6913b92da1568e86fae38 71 PRINTS PR00050 Cold shock protein signature 6 21 1.9E-10 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS18380 084ead7ddda6913b92da1568e86fae38 71 PIRSF PIRSF002599 1 71 8.4E-20 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CJD35_RS18380 084ead7ddda6913b92da1568e86fae38 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.9E-20 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS18380 084ead7ddda6913b92da1568e86fae38 71 SUPERFAMILY SSF50249 3 68 2.36E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS21500 084ead7ddda6913b92da1568e86fae38 71 SMART SM00357 5 70 6.4E-17 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CJD35_RS21500 084ead7ddda6913b92da1568e86fae38 71 Gene3D G3DSA:2.40.50.140 1 71 1.1E-21 T 28-03-2018 CJD35_RS21500 084ead7ddda6913b92da1568e86fae38 71 PRINTS PR00050 Cold shock protein signature 42 60 1.9E-10 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS21500 084ead7ddda6913b92da1568e86fae38 71 PRINTS PR00050 Cold shock protein signature 27 36 1.9E-10 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS21500 084ead7ddda6913b92da1568e86fae38 71 PRINTS PR00050 Cold shock protein signature 6 21 1.9E-10 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS21500 084ead7ddda6913b92da1568e86fae38 71 PIRSF PIRSF002599 1 71 8.4E-20 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CJD35_RS21500 084ead7ddda6913b92da1568e86fae38 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.9E-20 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS21500 084ead7ddda6913b92da1568e86fae38 71 SUPERFAMILY SSF50249 3 68 2.36E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS10495 91c3250bf674bd8fb12051f27a4c1df0 383 Gene3D G3DSA:2.40.30.110 297 383 4.2E-27 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CJD35_RS10495 91c3250bf674bd8fb12051f27a4c1df0 383 Gene3D G3DSA:4.10.1250.10 249 293 1.1E-13 T 28-03-2018 CJD35_RS10495 91c3250bf674bd8fb12051f27a4c1df0 383 SUPERFAMILY SSF103025 19 295 2.2E-75 T 28-03-2018 CJD35_RS10495 91c3250bf674bd8fb12051f27a4c1df0 383 PIRSF PIRSF006487 2 383 3.5E-76 T 28-03-2018 CJD35_RS10495 91c3250bf674bd8fb12051f27a4c1df0 383 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 280 371 2.6E-21 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CJD35_RS10495 91c3250bf674bd8fb12051f27a4c1df0 383 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 20 376 5.7E-96 T 28-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CJD35_RS10495 91c3250bf674bd8fb12051f27a4c1df0 383 Gene3D G3DSA:3.30.1360.120 15 148 3.1E-29 T 28-03-2018 CJD35_RS10495 91c3250bf674bd8fb12051f27a4c1df0 383 Gene3D G3DSA:3.30.1360.120 149 248 1.1E-25 T 28-03-2018 CJD35_RS10495 91c3250bf674bd8fb12051f27a4c1df0 383 Pfam PF01571 Aminomethyltransferase folate-binding domain 21 271 4.4E-78 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CJD35_RS10495 91c3250bf674bd8fb12051f27a4c1df0 383 SUPERFAMILY SSF101790 299 381 1.47E-25 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CJD35_RS08285 58f5a651dbdda28225d9f839267b29f5 302 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 16 297 4.1E-98 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CJD35_RS08285 58f5a651dbdda28225d9f839267b29f5 302 Pfam PF01040 UbiA prenyltransferase family 31 269 2.3E-58 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CJD35_RS08285 58f5a651dbdda28225d9f839267b29f5 302 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 14 299 19.599 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CJD35_RS00245 3f53cda7b5697133aa22ce9e381ff281 334 SMART SM00829 20 332 5.8E-42 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS00245 3f53cda7b5697133aa22ce9e381ff281 334 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 96 5.7E-7 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS00245 3f53cda7b5697133aa22ce9e381ff281 334 Gene3D G3DSA:3.40.50.720 143 318 4.4E-39 T 28-03-2018 CJD35_RS00245 3f53cda7b5697133aa22ce9e381ff281 334 SUPERFAMILY SSF51735 122 295 8.92E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS00245 3f53cda7b5697133aa22ce9e381ff281 334 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 11 333 2.7E-135 T 28-03-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 CJD35_RS00245 3f53cda7b5697133aa22ce9e381ff281 334 Gene3D G3DSA:3.90.180.10 8 142 1.5E-34 T 28-03-2018 CJD35_RS00245 3f53cda7b5697133aa22ce9e381ff281 334 SUPERFAMILY SSF50129 11 144 1.0E-37 T 28-03-2018 IPR011032 GroES-like CJD35_RS00245 3f53cda7b5697133aa22ce9e381ff281 334 Pfam PF00107 Zinc-binding dehydrogenase 160 275 2.1E-28 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS08615 deac2ebe452359f816464ad4b022a700 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 6.6E-27 T 28-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08615 deac2ebe452359f816464ad4b022a700 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 28-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08615 deac2ebe452359f816464ad4b022a700 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.706 T 28-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CJD35_RS08615 deac2ebe452359f816464ad4b022a700 101 SUPERFAMILY SSF57716 2 101 9.98E-35 T 28-03-2018 CJD35_RS08615 deac2ebe452359f816464ad4b022a700 101 Gene3D G3DSA:4.10.830.10 1 101 7.1E-34 T 28-03-2018 CJD35_RS13075 458cd13afb7ec42733f222d836ac41e2 484 Gene3D G3DSA:3.40.50.1580 173 467 1.3E-60 T 28-03-2018 CJD35_RS13075 458cd13afb7ec42733f222d836ac41e2 484 Hamap MF_01932 AMP nucleosidase [amn]. 1 484 56.041 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CJD35_RS13075 458cd13afb7ec42733f222d836ac41e2 484 SUPERFAMILY SSF53167 8 484 1.96E-151 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJD35_RS13075 458cd13afb7ec42733f222d836ac41e2 484 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 9 484 1.0E-204 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CJD35_RS13075 458cd13afb7ec42733f222d836ac41e2 484 Pfam PF01048 Phosphorylase superfamily 268 429 2.1E-18 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJD35_RS13075 458cd13afb7ec42733f222d836ac41e2 484 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 9 165 3.1E-49 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CJD35_RS13075 458cd13afb7ec42733f222d836ac41e2 484 Gene3D G3DSA:3.30.1730.10 4 169 9.9E-48 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CJD35_RS06205 d98d068ee1c936009db985aaed8521e8 735 Gene3D G3DSA:3.90.1170.50 2 137 1.1E-26 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS06205 d98d068ee1c936009db985aaed8521e8 735 Gene3D G3DSA:3.30.365.10 165 271 4.4E-31 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS06205 d98d068ee1c936009db985aaed8521e8 735 SMART SM01008 32 138 1.1E-26 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS06205 d98d068ee1c936009db985aaed8521e8 735 Gene3D G3DSA:3.30.365.10 439 593 4.5E-29 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS06205 d98d068ee1c936009db985aaed8521e8 735 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 164 673 2.8E-115 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS06205 d98d068ee1c936009db985aaed8521e8 735 SUPERFAMILY SSF56003 149 732 1.83E-159 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS06205 d98d068ee1c936009db985aaed8521e8 735 SUPERFAMILY SSF54665 11 149 2.36E-29 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS06205 d98d068ee1c936009db985aaed8521e8 735 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 37 137 5.9E-20 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS06205 d98d068ee1c936009db985aaed8521e8 735 Gene3D G3DSA:3.30.365.10 272 423 5.5E-30 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS06205 d98d068ee1c936009db985aaed8521e8 735 Gene3D G3DSA:3.30.365.10 594 734 3.0E-39 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS16500 2fdb9b95779f027cf817fbbb5a4666b0 427 SUPERFAMILY SSF51905 349 405 1.55E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16500 2fdb9b95779f027cf817fbbb5a4666b0 427 SUPERFAMILY SSF51905 28 254 1.55E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16500 2fdb9b95779f027cf817fbbb5a4666b0 427 Gene3D G3DSA:3.50.50.60 22 403 6.3E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16500 2fdb9b95779f027cf817fbbb5a4666b0 427 Pfam PF01266 FAD dependent oxidoreductase 29 384 5.3E-55 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CJD35_RS13400 961eda1849bfe29807f4c00c334086bd 492 Pfam PF09913 Predicted membrane protein (DUF2142) 36 428 3.4E-56 T 28-03-2018 IPR018674 Protein of unknown function DUF2142, membrane CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 397 406 - T 28-03-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 SUPERFAMILY SSF48264 29 454 7.73E-85 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 PRINTS PR00463 E-class P450 group I signature 257 274 6.7E-19 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 PRINTS PR00463 E-class P450 group I signature 277 303 6.7E-19 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 PRINTS PR00463 E-class P450 group I signature 359 383 6.7E-19 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 PRINTS PR00463 E-class P450 group I signature 394 404 6.7E-19 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 PRINTS PR00463 E-class P450 group I signature 404 427 6.7E-19 T 28-03-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 PRINTS PR00385 P450 superfamily signature 268 285 1.2E-13 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 PRINTS PR00385 P450 superfamily signature 404 415 1.2E-13 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 PRINTS PR00385 P450 superfamily signature 395 404 1.2E-13 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 PRINTS PR00385 P450 superfamily signature 320 331 1.2E-13 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 Gene3D G3DSA:1.10.630.10 4 456 2.4E-90 T 28-03-2018 CJD35_RS04215 1876504f25c6231f501dd3cd3b9b7841 458 Pfam PF00067 Cytochrome P450 45 451 2.5E-71 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS09060 e58507be13837d1d9e35a1025a043c7e 431 Pfam PF00534 Glycosyl transferases group 1 247 366 5.1E-21 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS09060 e58507be13837d1d9e35a1025a043c7e 431 Gene3D G3DSA:3.40.50.2000 220 409 2.4E-28 T 28-03-2018 CJD35_RS09060 e58507be13837d1d9e35a1025a043c7e 431 SUPERFAMILY SSF53756 45 426 2.88E-40 T 28-03-2018 CJD35_RS20300 9fca81e7469da74782c3fc394c5f39e7 283 Pfam PF00581 Rhodanese-like domain 10 99 8.4E-7 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS20300 9fca81e7469da74782c3fc394c5f39e7 283 SMART SM00450 7 104 1.4E-7 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS20300 9fca81e7469da74782c3fc394c5f39e7 283 Pfam PF09828 Chromate resistance exported protein 122 258 4.6E-45 T 28-03-2018 IPR018634 Chromate resistance exported protein CJD35_RS20300 9fca81e7469da74782c3fc394c5f39e7 283 SUPERFAMILY SSF52821 1 153 1.83E-25 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS20300 9fca81e7469da74782c3fc394c5f39e7 283 Gene3D G3DSA:3.40.250.10 4 110 2.9E-16 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS19120 9fca81e7469da74782c3fc394c5f39e7 283 Pfam PF00581 Rhodanese-like domain 10 99 8.4E-7 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS19120 9fca81e7469da74782c3fc394c5f39e7 283 SMART SM00450 7 104 1.4E-7 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS19120 9fca81e7469da74782c3fc394c5f39e7 283 Pfam PF09828 Chromate resistance exported protein 122 258 4.6E-45 T 28-03-2018 IPR018634 Chromate resistance exported protein CJD35_RS19120 9fca81e7469da74782c3fc394c5f39e7 283 SUPERFAMILY SSF52821 1 153 1.83E-25 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS19120 9fca81e7469da74782c3fc394c5f39e7 283 Gene3D G3DSA:3.40.250.10 4 110 2.9E-16 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS19505 2f8fc6354368ac08ed0271b6aa6e79b7 332 Gene3D G3DSA:1.10.10.60 195 270 5.7E-7 T 28-03-2018 CJD35_RS19505 2f8fc6354368ac08ed0271b6aa6e79b7 332 Pfam PF14525 AraC-binding-like domain 32 205 6.7E-13 T 28-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CJD35_RS19505 2f8fc6354368ac08ed0271b6aa6e79b7 332 Gene3D G3DSA:1.10.10.60 272 325 4.2E-11 T 28-03-2018 CJD35_RS19505 2f8fc6354368ac08ed0271b6aa6e79b7 332 Pfam PF12833 Helix-turn-helix domain 243 321 5.3E-16 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS19505 2f8fc6354368ac08ed0271b6aa6e79b7 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 321 3.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS19505 2f8fc6354368ac08ed0271b6aa6e79b7 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 290 305 3.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS19505 2f8fc6354368ac08ed0271b6aa6e79b7 332 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 273 317 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CJD35_RS19505 2f8fc6354368ac08ed0271b6aa6e79b7 332 SUPERFAMILY SSF46689 272 322 3.58E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS19505 2f8fc6354368ac08ed0271b6aa6e79b7 332 SMART SM00342 237 321 6.8E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS09015 bb962065ed46b4d6ded5a80276cfa7ca 114 SUPERFAMILY SSF52833 4 114 6.71E-24 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS09015 bb962065ed46b4d6ded5a80276cfa7ca 114 Pfam PF03960 ArsC family 59 112 4.1E-8 T 28-03-2018 IPR006660 Arsenate reductase-like CJD35_RS09015 bb962065ed46b4d6ded5a80276cfa7ca 114 Gene3D G3DSA:3.40.30.10 1 114 4.1E-27 T 28-03-2018 CJD35_RS09015 bb962065ed46b4d6ded5a80276cfa7ca 114 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 114 5.9E-36 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CJD35_RS01005 1d6a50684128341626986712688cb402 434 Gene3D G3DSA:3.30.565.10 246 434 2.3E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS01005 1d6a50684128341626986712688cb402 434 SUPERFAMILY SSF47384 212 282 2.16E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS01005 1d6a50684128341626986712688cb402 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 332 432 6.4E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS01005 1d6a50684128341626986712688cb402 434 SUPERFAMILY SSF55874 294 433 6.81E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS01005 1d6a50684128341626986712688cb402 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 1.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS01005 1d6a50684128341626986712688cb402 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 391 1.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS01005 1d6a50684128341626986712688cb402 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 1.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS01005 1d6a50684128341626986712688cb402 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 432 1.2E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS01005 1d6a50684128341626986712688cb402 434 SMART SM00387 328 434 7.0E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS08800 6d790cb050498b574561df7b80f09c68 223 Pfam PF01625 Peptide methionine sulfoxide reductase 44 197 7.5E-50 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS08800 6d790cb050498b574561df7b80f09c68 223 SUPERFAMILY SSF55068 30 208 3.92E-59 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS08800 6d790cb050498b574561df7b80f09c68 223 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 203 30.839 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS08800 6d790cb050498b574561df7b80f09c68 223 Gene3D G3DSA:3.30.1060.10 29 204 1.1E-53 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS08800 6d790cb050498b574561df7b80f09c68 223 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 43 195 1.0E-47 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS18085 1fefde46802fb6a399dc12a3aeae8201 229 Pfam PF01786 Alternative oxidase 10 202 1.6E-82 T 28-03-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 CJD35_RS18085 1fefde46802fb6a399dc12a3aeae8201 229 PIRSF PIRSF005229 6 210 2.4E-103 T 28-03-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 CJD35_RS21205 1fefde46802fb6a399dc12a3aeae8201 229 Pfam PF01786 Alternative oxidase 10 202 1.6E-82 T 28-03-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 CJD35_RS21205 1fefde46802fb6a399dc12a3aeae8201 229 PIRSF PIRSF005229 6 210 2.4E-103 T 28-03-2018 IPR002680 Alternative oxidase GO:0009916|GO:0055114 CJD35_RS19280 3aa57bdf49b4fb4d8d0d4500919dfd7f 344 SUPERFAMILY SSF53756 2 325 2.42E-57 T 28-03-2018 CJD35_RS19280 3aa57bdf49b4fb4d8d0d4500919dfd7f 344 Pfam PF13439 Glycosyltransferase Family 4 1 148 2.5E-16 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS19280 3aa57bdf49b4fb4d8d0d4500919dfd7f 344 Gene3D G3DSA:3.40.50.2000 1 155 7.8E-11 T 28-03-2018 CJD35_RS19280 3aa57bdf49b4fb4d8d0d4500919dfd7f 344 Pfam PF00534 Glycosyl transferases group 1 156 288 1.7E-18 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS19280 3aa57bdf49b4fb4d8d0d4500919dfd7f 344 Gene3D G3DSA:3.40.50.2000 156 310 1.9E-27 T 28-03-2018 CJD35_RS21350 631bdb3b685b994984f60b34eb06eb40 329 SUPERFAMILY SSF50129 3 151 1.35E-34 T 28-03-2018 IPR011032 GroES-like CJD35_RS21350 631bdb3b685b994984f60b34eb06eb40 329 SMART SM00829 11 327 1.1E-29 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS21350 631bdb3b685b994984f60b34eb06eb40 329 SUPERFAMILY SSF51735 118 275 3.24E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS21350 631bdb3b685b994984f60b34eb06eb40 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 1.2E-8 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS21350 631bdb3b685b994984f60b34eb06eb40 329 Gene3D G3DSA:3.40.50.720 141 313 1.9E-31 T 28-03-2018 CJD35_RS21350 631bdb3b685b994984f60b34eb06eb40 329 Gene3D G3DSA:3.90.180.10 1 140 2.4E-34 T 28-03-2018 CJD35_RS21350 631bdb3b685b994984f60b34eb06eb40 329 Pfam PF00107 Zinc-binding dehydrogenase 158 275 1.7E-24 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS18230 631bdb3b685b994984f60b34eb06eb40 329 SUPERFAMILY SSF50129 3 151 1.35E-34 T 28-03-2018 IPR011032 GroES-like CJD35_RS18230 631bdb3b685b994984f60b34eb06eb40 329 SMART SM00829 11 327 1.1E-29 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS18230 631bdb3b685b994984f60b34eb06eb40 329 SUPERFAMILY SSF51735 118 275 3.24E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS18230 631bdb3b685b994984f60b34eb06eb40 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 90 1.2E-8 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS18230 631bdb3b685b994984f60b34eb06eb40 329 Gene3D G3DSA:3.40.50.720 141 313 1.9E-31 T 28-03-2018 CJD35_RS18230 631bdb3b685b994984f60b34eb06eb40 329 Gene3D G3DSA:3.90.180.10 1 140 2.4E-34 T 28-03-2018 CJD35_RS18230 631bdb3b685b994984f60b34eb06eb40 329 Pfam PF00107 Zinc-binding dehydrogenase 158 275 1.7E-24 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS14675 d181c39097d5628557b786c344791c0f 1067 SMART SM00869 794 1053 1.2E-10 T 28-03-2018 IPR005546 Autotransporter beta-domain CJD35_RS14675 d181c39097d5628557b786c344791c0f 1067 SUPERFAMILY SSF103515 790 1065 2.48E-29 T 28-03-2018 IPR005546 Autotransporter beta-domain CJD35_RS14675 d181c39097d5628557b786c344791c0f 1067 Gene3D G3DSA:2.40.128.130 724 1065 7.4E-25 T 28-03-2018 CJD35_RS14675 d181c39097d5628557b786c344791c0f 1067 Pfam PF03797 Autotransporter beta-domain 798 1025 7.3E-20 T 28-03-2018 IPR005546 Autotransporter beta-domain CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 PRINTS PR00701 60kDa inner membrane protein signature 252 267 2.6E-22 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 PRINTS PR00701 60kDa inner membrane protein signature 329 349 2.6E-22 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 PRINTS PR00701 60kDa inner membrane protein signature 2 23 2.6E-22 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 PRINTS PR00701 60kDa inner membrane protein signature 420 443 2.6E-22 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 PRINTS PR00701 60kDa inner membrane protein signature 80 101 2.6E-22 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 Pfam PF02096 60Kd inner membrane protein 359 556 6.2E-59 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 Pfam PF14849 YidC periplasmic domain 74 347 1.4E-77 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 5 357 9.3E-88 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 358 556 1.1E-67 T 28-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 5 558 20.835 T 28-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 PRINTS PR01900 YidC translocation/secretion protein signature 344 360 1.5E-13 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 PRINTS PR01900 YidC translocation/secretion protein signature 511 535 1.5E-13 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJD35_RS02380 95e035be36133634f5a0124d33247c18 567 PRINTS PR01900 YidC translocation/secretion protein signature 492 507 1.5E-13 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CJD35_RS18370 fbda30f87edfff72750d2ff0c78a1828 141 Gene3D G3DSA:3.10.50.30 51 136 1.4E-17 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJD35_RS18370 fbda30f87edfff72750d2ff0c78a1828 141 Gene3D G3DSA:1.10.286.20 9 49 4.6E-5 T 28-03-2018 CJD35_RS18370 fbda30f87edfff72750d2ff0c78a1828 141 SUPERFAMILY SSF54534 56 131 1.11E-16 T 28-03-2018 CJD35_RS18370 fbda30f87edfff72750d2ff0c78a1828 141 PIRSF PIRSF006092 2 134 1.6E-21 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CJD35_RS18370 fbda30f87edfff72750d2ff0c78a1828 141 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 56 131 1.8E-18 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJD35_RS21490 fbda30f87edfff72750d2ff0c78a1828 141 Gene3D G3DSA:3.10.50.30 51 136 1.4E-17 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJD35_RS21490 fbda30f87edfff72750d2ff0c78a1828 141 Gene3D G3DSA:1.10.286.20 9 49 4.6E-5 T 28-03-2018 CJD35_RS21490 fbda30f87edfff72750d2ff0c78a1828 141 SUPERFAMILY SSF54534 56 131 1.11E-16 T 28-03-2018 CJD35_RS21490 fbda30f87edfff72750d2ff0c78a1828 141 PIRSF PIRSF006092 2 134 1.6E-21 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CJD35_RS21490 fbda30f87edfff72750d2ff0c78a1828 141 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 56 131 1.8E-18 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJD35_RS19430 6460a9111ab81ab5c47fce51824e2e0c 203 Pfam PF01047 MarR family 89 139 6.9E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19430 6460a9111ab81ab5c47fce51824e2e0c 203 Gene3D G3DSA:1.10.10.10 33 195 1.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19430 6460a9111ab81ab5c47fce51824e2e0c 203 SMART SM00347 75 175 4.8E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19430 6460a9111ab81ab5c47fce51824e2e0c 203 SUPERFAMILY SSF46785 50 192 1.19E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19400 6460a9111ab81ab5c47fce51824e2e0c 203 Pfam PF01047 MarR family 89 139 6.9E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19400 6460a9111ab81ab5c47fce51824e2e0c 203 Gene3D G3DSA:1.10.10.10 33 195 1.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19400 6460a9111ab81ab5c47fce51824e2e0c 203 SMART SM00347 75 175 4.8E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19400 6460a9111ab81ab5c47fce51824e2e0c 203 SUPERFAMILY SSF46785 50 192 1.19E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS06680 134064be82b8aacc1064541dd6176872 532 SUPERFAMILY SSF82866 266 285 3.53E-44 T 28-03-2018 CJD35_RS06680 134064be82b8aacc1064541dd6176872 532 SUPERFAMILY SSF82866 328 525 3.53E-44 T 28-03-2018 CJD35_RS06680 134064be82b8aacc1064541dd6176872 532 Pfam PF02355 Protein export membrane protein 352 523 1.9E-17 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CJD35_RS06680 134064be82b8aacc1064541dd6176872 532 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 532 42.51 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CJD35_RS06680 134064be82b8aacc1064541dd6176872 532 PRINTS PR00702 Acriflavin resistance protein family signature 420 444 5.6E-7 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS06680 134064be82b8aacc1064541dd6176872 532 PRINTS PR00702 Acriflavin resistance protein family signature 367 390 5.6E-7 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS06680 134064be82b8aacc1064541dd6176872 532 PRINTS PR00702 Acriflavin resistance protein family signature 495 518 5.6E-7 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS06680 134064be82b8aacc1064541dd6176872 532 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 46 518 7.4E-138 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CJD35_RS06680 134064be82b8aacc1064541dd6176872 532 Pfam PF07549 SecD/SecF GG Motif 43 63 7.5E-5 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CJD35_RS06680 134064be82b8aacc1064541dd6176872 532 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 281 511 1.0E-75 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJD35_RS06680 134064be82b8aacc1064541dd6176872 532 Gene3D G3DSA:1.20.1640.10 313 525 3.5E-34 T 28-03-2018 CJD35_RS12965 95201ff4c32fe76911825545e5ea0318 717 SUPERFAMILY SSF51703 5 541 7.32E-221 T 28-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CJD35_RS12965 95201ff4c32fe76911825545e5ea0318 717 Gene3D G3DSA:3.40.50.280 562 708 2.5E-37 T 28-03-2018 CJD35_RS12965 95201ff4c32fe76911825545e5ea0318 717 Pfam PF02310 B12 binding domain 581 694 6.3E-13 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CJD35_RS12965 95201ff4c32fe76911825545e5ea0318 717 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 578 704 4.4E-51 T 28-03-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CJD35_RS12965 95201ff4c32fe76911825545e5ea0318 717 Pfam PF01642 Methylmalonyl-CoA mutase 26 538 1.1E-236 T 28-03-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CJD35_RS12965 95201ff4c32fe76911825545e5ea0318 717 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 365 390 - T 28-03-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0008152|GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CJD35_RS12965 95201ff4c32fe76911825545e5ea0318 717 SUPERFAMILY SSF52242 548 704 1.57E-54 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CJD35_RS12965 95201ff4c32fe76911825545e5ea0318 717 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 25 544 5.0E-262 T 28-03-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CJD35_RS12965 95201ff4c32fe76911825545e5ea0318 717 Gene3D G3DSA:3.20.20.240 25 541 6.4E-251 T 28-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CJD35_RS07450 757a95bde5469591bfd2f92fca464f11 505 Gene3D G3DSA:3.40.50.620 1 336 8.9E-57 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS07450 757a95bde5469591bfd2f92fca464f11 505 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 34 45 7.7E-22 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CJD35_RS07450 757a95bde5469591bfd2f92fca464f11 505 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 240 261 7.7E-22 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CJD35_RS07450 757a95bde5469591bfd2f92fca464f11 505 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 70 79 7.7E-22 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CJD35_RS07450 757a95bde5469591bfd2f92fca464f11 505 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 209 227 7.7E-22 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CJD35_RS07450 757a95bde5469591bfd2f92fca464f11 505 SUPERFAMILY SSF52374 12 340 1.36E-62 T 28-03-2018 CJD35_RS07450 757a95bde5469591bfd2f92fca464f11 505 Gene3D G3DSA:1.20.120.640 337 435 1.3E-4 T 28-03-2018 CJD35_RS07450 757a95bde5469591bfd2f92fca464f11 505 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 24 340 1.6E-71 T 28-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CJD35_RS07450 757a95bde5469591bfd2f92fca464f11 505 SUPERFAMILY SSF47323 378 494 2.48E-19 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS07450 757a95bde5469591bfd2f92fca464f11 505 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 11 502 30.695 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CJD35_RS11905 a4fa655685715ef23fbe15d555aa58b9 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 156 1.5E-24 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS11905 a4fa655685715ef23fbe15d555aa58b9 162 SUPERFAMILY SSF88946 3 82 2.17E-18 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS11905 a4fa655685715ef23fbe15d555aa58b9 162 SUPERFAMILY SSF88659 95 159 1.02E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS11905 a4fa655685715ef23fbe15d555aa58b9 162 Gene3D G3DSA:1.10.10.10 76 161 8.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS11905 a4fa655685715ef23fbe15d555aa58b9 162 Pfam PF04542 Sigma-70 region 2 10 73 9.4E-15 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS11905 a4fa655685715ef23fbe15d555aa58b9 162 Gene3D G3DSA:1.10.1740.10 2 75 1.1E-16 T 28-03-2018 CJD35_RS11905 a4fa655685715ef23fbe15d555aa58b9 162 Pfam PF08281 Sigma-70, region 4 104 154 1.7E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03685 d1d2233fb553a5a0a5405557e6804d79 363 SUPERFAMILY SSF46589 12 98 5.75E-16 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 CJD35_RS03685 d1d2233fb553a5a0a5405557e6804d79 363 Pfam PF01409 tRNA synthetases class II core domain (F) 91 346 2.1E-99 T 28-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CJD35_RS03685 d1d2233fb553a5a0a5405557e6804d79 363 Gene3D G3DSA:3.30.930.10 7 350 2.0E-79 T 28-03-2018 CJD35_RS03685 d1d2233fb553a5a0a5405557e6804d79 363 SUPERFAMILY SSF55681 92 348 5.91E-76 T 28-03-2018 CJD35_RS03685 d1d2233fb553a5a0a5405557e6804d79 363 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 347 45.343 T 28-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CJD35_RS03685 d1d2233fb553a5a0a5405557e6804d79 363 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 41 346 1.3E-97 T 28-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CJD35_RS03685 d1d2233fb553a5a0a5405557e6804d79 363 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 7.0E-17 T 28-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CJD35_RS03725 83380d61f254d94cd69a103a1c58f74b 553 Gene3D G3DSA:3.60.110.10 1 244 5.1E-51 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS03725 83380d61f254d94cd69a103a1c58f74b 553 PIRSF PIRSF006630 2 252 2.4E-66 T 28-03-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CJD35_RS03725 83380d61f254d94cd69a103a1c58f74b 553 PIRSF PIRSF006630 247 553 1.3E-115 T 28-03-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CJD35_RS03725 83380d61f254d94cd69a103a1c58f74b 553 SUPERFAMILY SSF56317 3 240 1.57E-54 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS03725 83380d61f254d94cd69a103a1c58f74b 553 Pfam PF02540 NAD synthase 268 526 2.1E-69 T 28-03-2018 IPR022310 NAD/GMP synthase CJD35_RS03725 83380d61f254d94cd69a103a1c58f74b 553 SUPERFAMILY SSF52402 259 536 1.79E-79 T 28-03-2018 CJD35_RS03725 83380d61f254d94cd69a103a1c58f74b 553 Gene3D G3DSA:3.40.50.620 265 553 3.2E-62 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS03725 83380d61f254d94cd69a103a1c58f74b 553 TIGRFAM TIGR00552 nadE: NAD+ synthetase 275 529 1.7E-56 T 28-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CJD35_RS03725 83380d61f254d94cd69a103a1c58f74b 553 Pfam PF00795 Carbon-nitrogen hydrolase 7 240 4.6E-29 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS03910 3b39a93dbb7ee5ee477412e39cb02789 426 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 69 260 2.7E-80 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS03910 3b39a93dbb7ee5ee477412e39cb02789 426 SUPERFAMILY SSF142695 267 425 3.4E-37 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CJD35_RS03910 3b39a93dbb7ee5ee477412e39cb02789 426 PIRSF PIRSF001259 64 426 3.6E-109 T 28-03-2018 CJD35_RS03910 3b39a93dbb7ee5ee477412e39cb02789 426 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 63 265 36.99 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS03910 3b39a93dbb7ee5ee477412e39cb02789 426 Gene3D G3DSA:1.10.260.40 1 67 2.0E-4 T 28-03-2018 CJD35_RS03910 3b39a93dbb7ee5ee477412e39cb02789 426 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 69 261 1.7E-69 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS03910 3b39a93dbb7ee5ee477412e39cb02789 426 Pfam PF00925 GTP cyclohydrolase II 270 422 7.5E-28 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CJD35_RS03910 3b39a93dbb7ee5ee477412e39cb02789 426 Gene3D G3DSA:3.90.870.10 68 274 8.5E-90 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CJD35_RS03910 3b39a93dbb7ee5ee477412e39cb02789 426 SUPERFAMILY SSF55821 63 265 1.14E-83 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CJD35_RS11360 558e7470d88b545f9663fb7d4fd91681 214 SUPERFAMILY SSF143081 9 195 2.09E-40 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) CJD35_RS11360 558e7470d88b545f9663fb7d4fd91681 214 Gene3D G3DSA:3.90.1680.10 1 200 1.7E-36 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) CJD35_RS11360 558e7470d88b545f9663fb7d4fd91681 214 Pfam PF02586 SOS response associated peptidase (SRAP) 1 194 1.5E-19 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) CJD35_RS13945 6080296d986db52fda5499690a40807b 46 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 4 45 4.0E-21 T 28-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type CJD35_RS13945 6080296d986db52fda5499690a40807b 46 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 4 45 2.5E-21 T 28-03-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type CJD35_RS18860 884fcbb63bf4e1610c4e2b15b139dc97 339 Gene3D G3DSA:3.40.50.720 128 298 2.1E-38 T 28-03-2018 CJD35_RS18860 884fcbb63bf4e1610c4e2b15b139dc97 339 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 325 1.2E-25 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CJD35_RS18860 884fcbb63bf4e1610c4e2b15b139dc97 339 Gene3D G3DSA:3.40.50.720 1 127 3.1E-31 T 28-03-2018 CJD35_RS18860 884fcbb63bf4e1610c4e2b15b139dc97 339 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJD35_RS18860 884fcbb63bf4e1610c4e2b15b139dc97 339 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 298 3.0E-50 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CJD35_RS18860 884fcbb63bf4e1610c4e2b15b139dc97 339 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJD35_RS18860 884fcbb63bf4e1610c4e2b15b139dc97 339 SUPERFAMILY SSF51735 102 299 9.73E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS18860 884fcbb63bf4e1610c4e2b15b139dc97 339 SUPERFAMILY SSF52283 2 135 6.59E-35 T 28-03-2018 CJD35_RS11090 127496a33a2e9ad487f10bbb77cc5246 143 Pfam PF01250 Ribosomal protein S6 4 92 3.3E-29 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11090 127496a33a2e9ad487f10bbb77cc5246 143 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.6E-25 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11090 127496a33a2e9ad487f10bbb77cc5246 143 SUPERFAMILY SSF54995 1 104 9.42E-35 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11090 127496a33a2e9ad487f10bbb77cc5246 143 Gene3D G3DSA:3.30.70.60 1 98 1.0E-30 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CJD35_RS11090 127496a33a2e9ad487f10bbb77cc5246 143 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.967 T 28-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CJD35_RS18155 aec08609851aa0766902a2ccbd62df6c 710 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 295 451 1.1E-29 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18155 aec08609851aa0766902a2ccbd62df6c 710 SUPERFAMILY SSF141868 467 706 1.44E-79 T 28-03-2018 IPR001633 EAL domain CJD35_RS18155 aec08609851aa0766902a2ccbd62df6c 710 SMART SM00267 285 452 7.7E-50 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18155 aec08609851aa0766902a2ccbd62df6c 710 SUPERFAMILY SSF55073 302 454 4.0E-41 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS18155 aec08609851aa0766902a2ccbd62df6c 710 Gene3D G3DSA:3.20.20.450 460 710 3.1E-90 T 28-03-2018 IPR001633 EAL domain CJD35_RS18155 aec08609851aa0766902a2ccbd62df6c 710 Pfam PF00990 Diguanylate cyclase, GGDEF domain 298 447 1.9E-35 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18155 aec08609851aa0766902a2ccbd62df6c 710 Pfam PF05228 CHASE4 domain 63 217 5.2E-20 T 28-03-2018 IPR007892 CHASE4 CJD35_RS18155 aec08609851aa0766902a2ccbd62df6c 710 SMART SM00052 462 702 2.1E-100 T 28-03-2018 IPR001633 EAL domain CJD35_RS18155 aec08609851aa0766902a2ccbd62df6c 710 Pfam PF00563 EAL domain 468 697 8.6E-72 T 28-03-2018 IPR001633 EAL domain CJD35_RS18155 aec08609851aa0766902a2ccbd62df6c 710 Gene3D G3DSA:3.30.70.270 292 459 8.7E-53 T 28-03-2018 CJD35_RS21275 aec08609851aa0766902a2ccbd62df6c 710 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 295 451 1.1E-29 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS21275 aec08609851aa0766902a2ccbd62df6c 710 SUPERFAMILY SSF141868 467 706 1.44E-79 T 28-03-2018 IPR001633 EAL domain CJD35_RS21275 aec08609851aa0766902a2ccbd62df6c 710 SMART SM00267 285 452 7.7E-50 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS21275 aec08609851aa0766902a2ccbd62df6c 710 SUPERFAMILY SSF55073 302 454 4.0E-41 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS21275 aec08609851aa0766902a2ccbd62df6c 710 Gene3D G3DSA:3.20.20.450 460 710 3.1E-90 T 28-03-2018 IPR001633 EAL domain CJD35_RS21275 aec08609851aa0766902a2ccbd62df6c 710 Pfam PF00990 Diguanylate cyclase, GGDEF domain 298 447 1.9E-35 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS21275 aec08609851aa0766902a2ccbd62df6c 710 Pfam PF05228 CHASE4 domain 63 217 5.2E-20 T 28-03-2018 IPR007892 CHASE4 CJD35_RS21275 aec08609851aa0766902a2ccbd62df6c 710 SMART SM00052 462 702 2.1E-100 T 28-03-2018 IPR001633 EAL domain CJD35_RS21275 aec08609851aa0766902a2ccbd62df6c 710 Pfam PF00563 EAL domain 468 697 8.6E-72 T 28-03-2018 IPR001633 EAL domain CJD35_RS21275 aec08609851aa0766902a2ccbd62df6c 710 Gene3D G3DSA:3.30.70.270 292 459 8.7E-53 T 28-03-2018 CJD35_RS06765 e281e7f94bc541a4e50a5b83aa009246 110 SMART SM00418 8 88 4.5E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS06765 e281e7f94bc541a4e50a5b83aa009246 110 Pfam PF12840 Helix-turn-helix domain 10 69 3.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS06765 e281e7f94bc541a4e50a5b83aa009246 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.8E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS06765 e281e7f94bc541a4e50a5b83aa009246 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.8E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS06765 e281e7f94bc541a4e50a5b83aa009246 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.8E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS06765 e281e7f94bc541a4e50a5b83aa009246 110 Gene3D G3DSA:1.10.10.10 1 95 4.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS06765 e281e7f94bc541a4e50a5b83aa009246 110 SUPERFAMILY SSF46785 3 93 6.03E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02385 9a8574efe425c7d511815c3ff7f4b96e 212 SUPERFAMILY SSF52540 22 208 4.65E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS02385 9a8574efe425c7d511815c3ff7f4b96e 212 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 19 204 4.9E-68 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CJD35_RS02385 9a8574efe425c7d511815c3ff7f4b96e 212 Pfam PF01926 50S ribosome-binding GTPase 37 156 7.8E-22 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS02385 9a8574efe425c7d511815c3ff7f4b96e 212 Gene3D G3DSA:3.40.50.300 12 211 5.0E-30 T 28-03-2018 CJD35_RS02385 9a8574efe425c7d511815c3ff7f4b96e 212 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 23 209 29.107 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CJD35_RS09730 7f4c0f7d8c2cb1b1fc00b1adb53a7053 117 SUPERFAMILY SSF54909 1 117 3.49E-33 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS09730 7f4c0f7d8c2cb1b1fc00b1adb53a7053 117 Gene3D G3DSA:3.30.70.1060 1 117 2.9E-34 T 28-03-2018 CJD35_RS09730 7f4c0f7d8c2cb1b1fc00b1adb53a7053 117 Pfam PF03795 YCII-related domain 1 114 4.8E-21 T 28-03-2018 IPR005545 YCII-related CJD35_RS08905 b1c631cdd50e44b38a9f73d430105100 168 Pfam PF02556 Preprotein translocase subunit SecB 19 156 4.3E-51 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CJD35_RS08905 b1c631cdd50e44b38a9f73d430105100 168 Hamap MF_00821 Protein-export protein SecB [secB]. 1 158 30.25 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CJD35_RS08905 b1c631cdd50e44b38a9f73d430105100 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 110 132 3.9E-25 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CJD35_RS08905 b1c631cdd50e44b38a9f73d430105100 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 26 43 3.9E-25 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CJD35_RS08905 b1c631cdd50e44b38a9f73d430105100 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 86 106 3.9E-25 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CJD35_RS08905 b1c631cdd50e44b38a9f73d430105100 168 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 136 154 3.9E-25 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CJD35_RS08905 b1c631cdd50e44b38a9f73d430105100 168 Gene3D G3DSA:3.10.420.10 14 165 3.6E-45 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CJD35_RS08905 b1c631cdd50e44b38a9f73d430105100 168 SUPERFAMILY SSF54611 12 154 2.4E-49 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CJD35_RS08905 b1c631cdd50e44b38a9f73d430105100 168 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 20 155 4.4E-40 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 174 310 7.1E-40 T 28-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 Gene3D G3DSA:3.40.50.261 153 311 1.0E-32 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 Pfam PF13380 CoA binding domain 26 151 3.6E-23 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 SUPERFAMILY SSF52210 319 472 2.62E-22 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 SUPERFAMILY SSF51735 14 155 1.3E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 Pfam PF13549 ATP-grasp domain 498 712 1.2E-57 T 28-03-2018 CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 SUPERFAMILY SSF56059 499 712 7.42E-42 T 28-03-2018 CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 Gene3D G3DSA:3.40.50.720 22 152 6.8E-38 T 28-03-2018 CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 Gene3D G3DSA:3.40.50.261 315 484 1.0E-19 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 Gene3D G3DSA:3.30.1490.20 519 582 8.8E-25 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 SUPERFAMILY SSF52210 148 312 1.22E-32 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 SMART SM00881 22 117 2.4E-31 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CJD35_RS16440 c61e178514bdaadba587a300aeb6876f 712 Gene3D G3DSA:3.30.470.20 583 712 2.3E-21 T 28-03-2018 CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 Pfam PF01556 DnaJ C terminal domain 125 338 1.3E-40 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 Pfam PF00226 DnaJ domain 6 68 3.7E-24 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 SMART SM00271 5 63 8.5E-26 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 Gene3D G3DSA:2.60.260.20 202 258 2.3E-18 T 28-03-2018 CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 Gene3D G3DSA:1.10.287.110 2 120 5.3E-32 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 PRINTS PR00625 DnaJ domain signature 8 26 1.9E-25 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 PRINTS PR00625 DnaJ domain signature 63 82 1.9E-25 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 PRINTS PR00625 DnaJ domain signature 43 63 1.9E-25 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 PRINTS PR00625 DnaJ domain signature 26 41 1.9E-25 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 SUPERFAMILY SSF46565 3 111 2.49E-32 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 SUPERFAMILY SSF49493 263 349 1.7E-22 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 Gene3D G3DSA:2.60.260.20 259 365 2.1E-29 T 28-03-2018 CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 SUPERFAMILY SSF57938 138 214 1.7E-22 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 374 39.709 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 48 67 - T 28-03-2018 IPR018253 DnaJ domain, conserved site CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 Pfam PF00684 DnaJ central domain 151 211 5.7E-15 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 SUPERFAMILY SSF49493 217 271 1.57E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 SUPERFAMILY SSF49493 118 173 1.57E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 Gene3D G3DSA:2.10.230.10 148 201 3.3E-20 T 28-03-2018 CJD35_RS01945 738283d091a49a4eb5719885ed39dbf3 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 6 355 1.1E-131 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CJD35_RS20540 edff361fa671b01ded012b86aa087388 763 Pfam PF01526 Tn3 transposase DDE domain 526 763 1.4E-79 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS20540 edff361fa671b01ded012b86aa087388 763 Pfam PF13700 Domain of unknown function (DUF4158) 1 115 1.6E-26 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CJD35_RS05840 996d82f8ba09bb6d1f9b7bad2516d719 316 SUPERFAMILY SSF50129 2 136 3.35E-33 T 28-03-2018 IPR011032 GroES-like CJD35_RS05840 996d82f8ba09bb6d1f9b7bad2516d719 316 Pfam PF13602 Zinc-binding dehydrogenase 177 314 9.6E-17 T 28-03-2018 CJD35_RS05840 996d82f8ba09bb6d1f9b7bad2516d719 316 SUPERFAMILY SSF51735 106 259 7.76E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS05840 996d82f8ba09bb6d1f9b7bad2516d719 316 Gene3D G3DSA:3.40.50.720 129 300 1.9E-26 T 28-03-2018 CJD35_RS05840 996d82f8ba09bb6d1f9b7bad2516d719 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 83 7.8E-8 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS05840 996d82f8ba09bb6d1f9b7bad2516d719 316 SMART SM00829 7 314 5.4E-15 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS05840 996d82f8ba09bb6d1f9b7bad2516d719 316 Gene3D G3DSA:3.90.180.10 1 128 6.5E-33 T 28-03-2018 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 11 471 5.9E-144 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 PIRSF PIRSF001109 1 472 1.1E-182 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 SMART SM00996 11 471 0.0 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 Gene3D G3DSA:3.40.50.1480 246 445 5.5E-81 T 28-03-2018 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 SMART SM00997 233 392 1.7E-106 T 28-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 Gene3D G3DSA:3.40.50.1480 2 245 1.4E-101 T 28-03-2018 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 12 464 8.3E-178 T 28-03-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 SUPERFAMILY SSF52283 9 150 4.19E-114 T 28-03-2018 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 SUPERFAMILY SSF52283 185 232 4.19E-114 T 28-03-2018 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 SUPERFAMILY SSF52283 393 472 4.19E-114 T 28-03-2018 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 233 392 4.1E-78 T 28-03-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 255 272 - T 28-03-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013|GO:0006730 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 7 464 47.549 T 28-03-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508 CJD35_RS13090 46c8427ee30eb8afdc50b1fafa511723 472 SUPERFAMILY SSF51735 233 392 7.34E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10005 1cf1d3394afbe6fa2f40c3c1c45d5b69 249 Gene3D G3DSA:3.40.50.2020 78 249 3.8E-26 T 28-03-2018 CJD35_RS10005 1cf1d3394afbe6fa2f40c3c1c45d5b69 249 SUPERFAMILY SSF53271 60 242 1.33E-29 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CJD35_RS01255 46d29c85444ee980e6024b3708d0ab26 237 Gene3D G3DSA:3.30.1230.10 1 91 1.9E-23 T 28-03-2018 IPR007393 Domain of unknown function DUF448 CJD35_RS01255 46d29c85444ee980e6024b3708d0ab26 237 Pfam PF04296 Protein of unknown function (DUF448) 4 81 5.8E-16 T 28-03-2018 IPR007393 Domain of unknown function DUF448 CJD35_RS01255 46d29c85444ee980e6024b3708d0ab26 237 SUPERFAMILY SSF64376 2 90 9.81E-18 T 28-03-2018 IPR007393 Domain of unknown function DUF448 CJD35_RS01255 46d29c85444ee980e6024b3708d0ab26 237 Gene3D G3DSA:3.30.1330.30 92 192 4.0E-11 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CJD35_RS01255 46d29c85444ee980e6024b3708d0ab26 237 SUPERFAMILY SSF55315 89 183 4.0E-8 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CJD35_RS07505 1f8b5fab68ab1d872e57e98c92db505e 364 Gene3D G3DSA:3.90.650.10 172 346 1.5E-56 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS07505 1f8b5fab68ab1d872e57e98c92db505e 364 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 341 4.0E-34 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS07505 1f8b5fab68ab1d872e57e98c92db505e 364 Pfam PF00586 AIR synthase related protein, N-terminal domain 61 165 7.6E-15 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS07505 1f8b5fab68ab1d872e57e98c92db505e 364 SUPERFAMILY SSF56042 172 344 4.34E-56 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS07505 1f8b5fab68ab1d872e57e98c92db505e 364 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 338 2.6E-126 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CJD35_RS07505 1f8b5fab68ab1d872e57e98c92db505e 364 SUPERFAMILY SSF55326 7 170 1.94E-47 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS07505 1f8b5fab68ab1d872e57e98c92db505e 364 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 352 43.684 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CJD35_RS07505 1f8b5fab68ab1d872e57e98c92db505e 364 Gene3D G3DSA:3.30.1330.10 35 162 2.6E-53 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 PIRSF PIRSF003161 7 338 1.2E-97 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 Gene3D G3DSA:1.10.220.30 201 338 8.0E-28 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 Gene3D G3DSA:1.10.220.30 79 194 3.8E-20 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 41 67 9.8E-47 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 278 304 9.8E-47 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 12 28 9.8E-47 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 121 144 9.8E-47 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 201 226 9.8E-47 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 254 274 9.8E-47 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 232 252 9.8E-47 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 Pfam PF14841 FliG middle domain 123 187 6.1E-21 T 28-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 11 336 1.1E-73 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 Gene3D G3DSA:1.10.220.30 14 76 1.5E-8 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 SUPERFAMILY SSF48029 121 331 1.44E-53 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 SUPERFAMILY SSF48029 16 125 2.49E-19 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 Pfam PF01706 FliG C-terminal domain 225 330 5.5E-33 T 28-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal CJD35_RS03135 7042a9fa51ea782e2f047d00fb2e2262 338 Pfam PF14842 FliG N-terminal domain 12 112 9.1E-25 T 28-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CJD35_RS00345 07e9379beac71910d8469d2e8efb16c5 133 Pfam PF11367 Protein of unknown function (DUF3168) 10 124 1.6E-7 T 28-03-2018 IPR021508 Tail completion protein CJD35_RS04390 ca6ff759a413bf4fc035f906520befe5 621 Gene3D G3DSA:2.120.10.30 129 619 5.4E-8 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS04390 ca6ff759a413bf4fc035f906520befe5 621 SUPERFAMILY SSF63829 301 374 5.23E-10 T 28-03-2018 CJD35_RS04390 ca6ff759a413bf4fc035f906520befe5 621 SUPERFAMILY SSF63829 498 594 5.23E-10 T 28-03-2018 CJD35_RS04390 ca6ff759a413bf4fc035f906520befe5 621 SUPERFAMILY SSF63829 424 456 5.23E-10 T 28-03-2018 CJD35_RS04390 ca6ff759a413bf4fc035f906520befe5 621 Pfam PF05787 Bacterial protein of unknown function (DUF839) 86 593 5.3E-136 T 28-03-2018 IPR008557 Protein of unknown function DUF839 CJD35_RS00310 93fb727a39c63d4f5fa1d8ec8467990e 273 Pfam PF09356 Phage conserved hypothetical protein BR0599 189 265 3.6E-23 T 28-03-2018 IPR018964 Bacteriophage phiJL001, Gp84, C-terminal CJD35_RS00310 93fb727a39c63d4f5fa1d8ec8467990e 273 TIGRFAM TIGR02218 phg_TIGR02218: phage conserved hypothetical protein BR0599 16 271 3.7E-62 T 28-03-2018 IPR011928 Bacteriophage phiJL001, Gp84 CJD35_RS00310 93fb727a39c63d4f5fa1d8ec8467990e 273 Pfam PF09931 Uncharacterized conserved protein (DUF2163) 3 161 1.0E-46 T 28-03-2018 IPR019228 Bacteriophage phiJL001, Gp84, N-terminal CJD35_RS06070 2b197816c57ad55667a951d622712065 402 Gene3D G3DSA:3.90.1150.10 280 397 1.2E-40 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS06070 2b197816c57ad55667a951d622712065 402 SUPERFAMILY SSF53383 11 398 6.12E-117 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS06070 2b197816c57ad55667a951d622712065 402 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 20 402 1.5E-166 T 28-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CJD35_RS06070 2b197816c57ad55667a951d622712065 402 Pfam PF00266 Aminotransferase class-V 23 390 4.4E-141 T 28-03-2018 IPR000192 Aminotransferase class V domain CJD35_RS06070 2b197816c57ad55667a951d622712065 402 Gene3D G3DSA:3.40.640.10 30 279 2.3E-59 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS06070 2b197816c57ad55667a951d622712065 402 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 214 233 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CJD35_RS18040 fac31e9d5ae5c382d5edacbab73f098e 58 Pfam PF12244 Protein of unknown function (DUF3606) 4 57 1.5E-23 T 28-03-2018 IPR022037 Protein of unknown function DUF3606 CJD35_RS21160 fac31e9d5ae5c382d5edacbab73f098e 58 Pfam PF12244 Protein of unknown function (DUF3606) 4 57 1.5E-23 T 28-03-2018 IPR022037 Protein of unknown function DUF3606 CJD35_RS02465 78c58abffc363f582f00b6be3ce1e529 324 SMART SM00922 127 220 8.5E-18 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CJD35_RS02465 78c58abffc363f582f00b6be3ce1e529 324 SUPERFAMILY SSF54826 5 109 5.72E-25 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS02465 78c58abffc363f582f00b6be3ce1e529 324 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 63 109 1.3E-6 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CJD35_RS02465 78c58abffc363f582f00b6be3ce1e529 324 Gene3D G3DSA:3.30.390.10 1 111 4.4E-21 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS02465 78c58abffc363f582f00b6be3ce1e529 324 Pfam PF13378 Enolase C-terminal domain-like 132 286 3.2E-27 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CJD35_RS02465 78c58abffc363f582f00b6be3ce1e529 324 SUPERFAMILY SSF51604 113 304 6.68E-50 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CJD35_RS02465 78c58abffc363f582f00b6be3ce1e529 324 Gene3D G3DSA:3.20.20.120 112 322 7.4E-45 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 243 918 1.1E-288 T 28-03-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Gene3D G3DSA:3.30.70.20 144 176 0.006 T 28-03-2018 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 848 875 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 240 290 6.1E-15 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Gene3D G3DSA:3.40.50.740 295 398 1.8E-21 T 28-03-2018 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 SUPERFAMILY SSF54292 21 93 7.69E-18 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Gene3D G3DSA:3.40.228.10 399 483 1.2E-21 T 28-03-2018 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 SUPERFAMILY SSF50692 778 919 4.29E-43 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Gene3D G3DSA:3.30.70.20 177 234 3.4E-8 T 28-03-2018 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 SMART SM00929 102 142 4.1E-19 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Gene3D G3DSA:2.20.25.90 235 294 1.2E-14 T 28-03-2018 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 SUPERFAMILY SSF53706 238 773 7.2E-190 T 28-03-2018 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 211 222 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 19 95 8.4E-22 T 28-03-2018 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 SUPERFAMILY SSF54862 94 233 7.53E-35 T 28-03-2018 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 SMART SM00926 238 292 9.4E-15 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Gene3D G3DSA:3.40.50.740 484 778 2.4E-77 T 28-03-2018 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 PIRSF PIRSF036643 16 948 0.0 T 28-03-2018 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Gene3D G3DSA:2.40.40.20 791 940 2.9E-36 T 28-03-2018 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Pfam PF01568 Molydopterin dinucleotide binding domain 810 914 4.0E-28 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 102 141 4.0E-16 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Gene3D G3DSA:3.10.20.30 17 133 4.5E-14 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS07725 37364d2b7ad1a6c4465cc2c084439426 948 Pfam PF00384 Molybdopterin oxidoreductase 295 725 4.5E-73 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS21580 f0dd3189611d8f31eb609662b9f014b6 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 186 2.8E-29 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS21580 f0dd3189611d8f31eb609662b9f014b6 191 Pfam PF08281 Sigma-70, region 4 130 182 3.5E-15 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS21580 f0dd3189611d8f31eb609662b9f014b6 191 Gene3D G3DSA:1.10.10.10 107 191 2.9E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21580 f0dd3189611d8f31eb609662b9f014b6 191 Gene3D G3DSA:1.10.1740.10 5 106 9.5E-24 T 28-03-2018 CJD35_RS21580 f0dd3189611d8f31eb609662b9f014b6 191 Pfam PF04542 Sigma-70 region 2 29 94 5.9E-17 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS21580 f0dd3189611d8f31eb609662b9f014b6 191 SUPERFAMILY SSF88659 123 187 2.62E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS21580 f0dd3189611d8f31eb609662b9f014b6 191 SUPERFAMILY SSF88946 6 112 3.61E-26 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS10940 c52791122395a1fe9004d154dc79f753 256 Pfam PF01061 ABC-2 type transporter 9 219 4.4E-33 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CJD35_RS10940 c52791122395a1fe9004d154dc79f753 256 PIRSF PIRSF006648 3 253 4.6E-31 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJD35_RS10940 c52791122395a1fe9004d154dc79f753 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 2.3E-12 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJD35_RS10940 c52791122395a1fe9004d154dc79f753 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 2.3E-12 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJD35_RS10940 c52791122395a1fe9004d154dc79f753 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 2.3E-12 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJD35_RS10940 c52791122395a1fe9004d154dc79f753 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 2.3E-12 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJD35_RS00070 823f405cbd5bfd339c44f56265fdb887 278 SUPERFAMILY SSF74650 2 276 2.95E-50 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CJD35_RS00070 823f405cbd5bfd339c44f56265fdb887 278 Gene3D G3DSA:2.70.98.10 1 278 4.2E-55 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CJD35_RS00070 823f405cbd5bfd339c44f56265fdb887 278 Pfam PF01263 Aldose 1-epimerase 12 274 1.1E-36 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CJD35_RS12825 eb41b28e4dff90967e88a2501f07ed6c 238 PIRSF PIRSF029730 2 237 8.7E-71 T 28-03-2018 IPR011227 Uncharacterised conserved protein UCP029730 CJD35_RS12825 eb41b28e4dff90967e88a2501f07ed6c 238 Pfam PF05013 N-formylglutamate amidohydrolase 14 212 3.3E-36 T 28-03-2018 IPR007709 N-formylglutamate amidohydrolase CJD35_RS12825 eb41b28e4dff90967e88a2501f07ed6c 238 Gene3D G3DSA:3.40.630.40 6 238 5.6E-52 T 28-03-2018 CJD35_RS12825 eb41b28e4dff90967e88a2501f07ed6c 238 SUPERFAMILY SSF53187 7 230 8.79E-58 T 28-03-2018 CJD35_RS06275 ed44bb1005eda3edc90c4a20b1619c20 328 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 228 324 2.4E-20 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CJD35_RS06275 ed44bb1005eda3edc90c4a20b1619c20 328 PIRSF PIRSF001619 1 328 2.7E-128 T 28-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CJD35_RS06275 ed44bb1005eda3edc90c4a20b1619c20 328 Hamap MF_01694 Biotin synthase [bioB]. 13 327 40.813 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CJD35_RS06275 ed44bb1005eda3edc90c4a20b1619c20 328 TIGRFAM TIGR00433 bioB: biotin synthase 23 324 6.2E-117 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CJD35_RS06275 ed44bb1005eda3edc90c4a20b1619c20 328 Pfam PF04055 Radical SAM superfamily 58 209 1.7E-13 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS06275 ed44bb1005eda3edc90c4a20b1619c20 328 Gene3D G3DSA:3.20.20.70 12 327 1.5E-52 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS06275 ed44bb1005eda3edc90c4a20b1619c20 328 SMART SM00729 51 260 2.1E-38 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS06275 ed44bb1005eda3edc90c4a20b1619c20 328 SUPERFAMILY SSF102114 17 324 4.45E-84 T 28-03-2018 CJD35_RS06275 ed44bb1005eda3edc90c4a20b1619c20 328 SMART SM00876 228 326 4.8E-43 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CJD35_RS17905 39237a6448c9d131940edbc734166150 150 Pfam PF09537 Domain of unknown function (DUF2383) 8 116 6.3E-35 T 28-03-2018 IPR019052 Domain of unknown function DUF2383 CJD35_RS17905 39237a6448c9d131940edbc734166150 150 TIGRFAM TIGR02284 TIGR02284: conserved hypothetical protein 8 145 9.6E-44 T 28-03-2018 IPR011971 Conserved hypothetical protein CHP02284 CJD35_RS17905 39237a6448c9d131940edbc734166150 150 Gene3D G3DSA:1.20.1260.10 1 149 1.9E-21 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS17905 39237a6448c9d131940edbc734166150 150 PIRSF PIRSF029477 1 150 3.7E-42 T 28-03-2018 IPR016920 Uncharacterised conserved protein UCP029477 CJD35_RS22255 3639d84d34a983b48a3333caae6af970 307 Pfam PF10134 Replication initiator protein A 21 249 6.5E-56 T 28-03-2018 IPR018777 Replication initiator protein A CJD35_RS22255 3639d84d34a983b48a3333caae6af970 307 Gene3D G3DSA:1.10.10.10 54 177 5.4E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS18025 fef40870b3b0383f9a73098810a2f4eb 179 Pfam PF13463 Winged helix DNA-binding domain 62 127 8.1E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS18025 fef40870b3b0383f9a73098810a2f4eb 179 Gene3D G3DSA:1.10.10.10 18 166 7.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS18025 fef40870b3b0383f9a73098810a2f4eb 179 SMART SM00347 53 154 4.8E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS18025 fef40870b3b0383f9a73098810a2f4eb 179 PRINTS PR00598 Bacterial regulatory protein MarR family signature 144 164 1.1E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS18025 fef40870b3b0383f9a73098810a2f4eb 179 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 110 1.1E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS18025 fef40870b3b0383f9a73098810a2f4eb 179 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 130 1.1E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS18025 fef40870b3b0383f9a73098810a2f4eb 179 SUPERFAMILY SSF46785 27 167 1.94E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10680 969c08da385fb2660b8b11cc7b1165df 512 SUPERFAMILY SSF48173 235 500 6.15E-60 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CJD35_RS10680 969c08da385fb2660b8b11cc7b1165df 512 Gene3D G3DSA:1.10.579.10 323 502 6.2E-28 T 28-03-2018 CJD35_RS10680 969c08da385fb2660b8b11cc7b1165df 512 Gene3D G3DSA:1.25.40.80 135 322 8.8E-49 T 28-03-2018 CJD35_RS10680 969c08da385fb2660b8b11cc7b1165df 512 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 10 232 1.2E-81 T 28-03-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein CJD35_RS16745 a8f10fa2955abaf8fefb11f236306e51 339 SMART SM00470 57 157 5.1E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS16745 a8f10fa2955abaf8fefb11f236306e51 339 Pfam PF02195 ParB-like nuclease domain 60 156 7.1E-12 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS16745 a8f10fa2955abaf8fefb11f236306e51 339 Gene3D G3DSA:3.90.1530.10 46 157 1.5E-14 T 28-03-2018 CJD35_RS16745 a8f10fa2955abaf8fefb11f236306e51 339 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 57 242 8.3E-27 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CJD35_RS16745 a8f10fa2955abaf8fefb11f236306e51 339 SUPERFAMILY SSF109709 150 237 7.72E-11 T 28-03-2018 CJD35_RS16745 a8f10fa2955abaf8fefb11f236306e51 339 Gene3D G3DSA:1.10.10.730 158 205 2.0E-5 T 28-03-2018 CJD35_RS16745 a8f10fa2955abaf8fefb11f236306e51 339 SUPERFAMILY SSF110849 61 159 2.09E-11 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS00315 bc2ab8062d7f359c4e3961d4f00bb6cd 782 TIGRFAM TIGR02217 chp_TIGR02217: TIGR02217 family protein 575 779 2.7E-61 T 28-03-2018 IPR011740 Protein of unknown function DUF2460 CJD35_RS00315 bc2ab8062d7f359c4e3961d4f00bb6cd 782 Pfam PF09343 Conserved hypothetical protein 2217 (DUF2460) 577 779 1.2E-69 T 28-03-2018 IPR011740 Protein of unknown function DUF2460 CJD35_RS07865 59663fc61164700dfa273f9cb2579f46 323 SUPERFAMILY SSF117892 58 184 3.4E-41 T 28-03-2018 IPR001107 Band 7 domain CJD35_RS07865 59663fc61164700dfa273f9cb2579f46 323 Pfam PF01145 SPFH domain / Band 7 family 23 192 1.0E-29 T 28-03-2018 IPR001107 Band 7 domain CJD35_RS07865 59663fc61164700dfa273f9cb2579f46 323 ProSitePatterns PS01270 Band 7 protein family signature. 133 161 - T 28-03-2018 IPR018080 Band 7/stomatin-like, conserved site CJD35_RS07865 59663fc61164700dfa273f9cb2579f46 323 PRINTS PR00721 Stomatin signature 26 48 4.1E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CJD35_RS07865 59663fc61164700dfa273f9cb2579f46 323 PRINTS PR00721 Stomatin signature 109 126 4.1E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CJD35_RS07865 59663fc61164700dfa273f9cb2579f46 323 PRINTS PR00721 Stomatin signature 172 193 4.1E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CJD35_RS07865 59663fc61164700dfa273f9cb2579f46 323 PRINTS PR00721 Stomatin signature 129 152 4.1E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CJD35_RS07865 59663fc61164700dfa273f9cb2579f46 323 PRINTS PR00721 Stomatin signature 74 95 4.1E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CJD35_RS07865 59663fc61164700dfa273f9cb2579f46 323 PRINTS PR00721 Stomatin signature 153 171 4.1E-32 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CJD35_RS07865 59663fc61164700dfa273f9cb2579f46 323 SMART SM00244 19 177 4.2E-50 T 28-03-2018 IPR001107 Band 7 domain CJD35_RS20725 d2a0aba6025bc4fe90bf0254c27ecbb4 94 Gene3D G3DSA:3.30.1200.10 13 94 2.5E-20 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS20725 d2a0aba6025bc4fe90bf0254c27ecbb4 94 SUPERFAMILY SSF69786 16 93 1.44E-19 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS20725 d2a0aba6025bc4fe90bf0254c27ecbb4 94 SMART SM01152 18 94 3.4E-22 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS20725 d2a0aba6025bc4fe90bf0254c27ecbb4 94 Hamap MF_00634 UPF0235 protein YggU [yggU]. 19 94 13.441 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS20725 d2a0aba6025bc4fe90bf0254c27ecbb4 94 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 23 93 2.0E-21 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS18495 d2a0aba6025bc4fe90bf0254c27ecbb4 94 Gene3D G3DSA:3.30.1200.10 13 94 2.5E-20 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS18495 d2a0aba6025bc4fe90bf0254c27ecbb4 94 SUPERFAMILY SSF69786 16 93 1.44E-19 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS18495 d2a0aba6025bc4fe90bf0254c27ecbb4 94 SMART SM01152 18 94 3.4E-22 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS18495 d2a0aba6025bc4fe90bf0254c27ecbb4 94 Hamap MF_00634 UPF0235 protein YggU [yggU]. 19 94 13.441 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS18495 d2a0aba6025bc4fe90bf0254c27ecbb4 94 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 23 93 2.0E-21 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS10810 f44b50cdfe722727edb290b9907133f8 110 TIGRFAM TIGR04433 UrcA_uranyl: UrcA family protein 5 92 1.2E-19 T 28-03-2018 IPR030972 UrcA family protein CJD35_RS14955 b07427432bd72a0c585f8b3cc86dba2e 791 Pfam PF00593 TonB dependent receptor 316 785 1.1E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS14955 b07427432bd72a0c585f8b3cc86dba2e 791 SUPERFAMILY SSF56935 60 791 2.66E-91 T 28-03-2018 CJD35_RS14955 b07427432bd72a0c585f8b3cc86dba2e 791 Gene3D G3DSA:2.170.130.10 55 191 3.7E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS14955 b07427432bd72a0c585f8b3cc86dba2e 791 Gene3D G3DSA:2.40.170.20 194 791 1.6E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS14955 b07427432bd72a0c585f8b3cc86dba2e 791 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 183 5.0E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 SUPERFAMILY SSF52540 142 375 6.92E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 SMART SM00382 162 301 3.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 SMART SM00448 3 116 2.5E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 SUPERFAMILY SSF46689 351 451 9.41E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 SUPERFAMILY SSF52172 3 187 2.99E-40 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 Gene3D G3DSA:1.10.10.60 397 456 1.4E-12 T 28-03-2018 CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 Gene3D G3DSA:3.40.50.300 144 310 9.0E-19 T 28-03-2018 CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 Gene3D G3DSA:1.10.8.60 311 391 3.6E-25 T 28-03-2018 CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 Pfam PF00158 Sigma-54 interaction domain 143 304 1.6E-46 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 Gene3D G3DSA:3.40.50.2300 1 143 6.0E-33 T 28-03-2018 CJD35_RS14100 66663a90fffca371e6c171ab107a8c59 456 Pfam PF02954 Bacterial regulatory protein, Fis family 409 447 8.9E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS21655 59ea0ef7055cdd5d896fedd798fb9e4a 333 SUPERFAMILY SSF56672 4 150 1.22E-23 T 28-03-2018 CJD35_RS21655 59ea0ef7055cdd5d896fedd798fb9e4a 333 Pfam PF13438 Domain of unknown function (DUF4113) 282 332 7.9E-15 T 28-03-2018 IPR025188 Domain of unknown function DUF4113 CJD35_RS21655 59ea0ef7055cdd5d896fedd798fb9e4a 333 Gene3D G3DSA:1.10.150.20 83 163 2.9E-11 T 28-03-2018 CJD35_RS21655 59ea0ef7055cdd5d896fedd798fb9e4a 333 Gene3D G3DSA:3.30.70.270 1 73 2.0E-7 T 28-03-2018 CJD35_RS21655 59ea0ef7055cdd5d896fedd798fb9e4a 333 Pfam PF00817 impB/mucB/samB family 7 64 6.1E-6 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CJD35_RS21655 59ea0ef7055cdd5d896fedd798fb9e4a 333 Pfam PF11799 impB/mucB/samB family C-terminal domain 160 266 1.8E-6 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CJD35_RS21655 59ea0ef7055cdd5d896fedd798fb9e4a 333 Gene3D G3DSA:3.30.1490.100 164 275 1.6E-14 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CJD35_RS14605 1cab24ff97b742c5f51f1638eb2f56f0 204 Gene3D G3DSA:1.10.1050.10 145 204 3.8E-7 T 28-03-2018 CJD35_RS14605 1cab24ff97b742c5f51f1638eb2f56f0 204 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 5 93 2.4E-24 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CJD35_RS14605 1cab24ff97b742c5f51f1638eb2f56f0 204 SUPERFAMILY SSF55174 4 204 2.49E-55 T 28-03-2018 CJD35_RS14605 1cab24ff97b742c5f51f1638eb2f56f0 204 ProSitePatterns PS00632 Ribosomal protein S4 signature. 92 116 - T 28-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS14605 1cab24ff97b742c5f51f1638eb2f56f0 204 Gene3D G3DSA:1.10.1050.10 1 99 1.3E-38 T 28-03-2018 CJD35_RS14605 1cab24ff97b742c5f51f1638eb2f56f0 204 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 204 29.897 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CJD35_RS14605 1cab24ff97b742c5f51f1638eb2f56f0 204 SMART SM00363 94 158 1.6E-15 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS14605 1cab24ff97b742c5f51f1638eb2f56f0 204 Pfam PF01479 S4 domain 94 141 3.3E-17 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS14605 1cab24ff97b742c5f51f1638eb2f56f0 204 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 204 3.3E-65 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CJD35_RS14605 1cab24ff97b742c5f51f1638eb2f56f0 204 Gene3D G3DSA:3.10.290.10 100 144 4.5E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS14605 1cab24ff97b742c5f51f1638eb2f56f0 204 SMART SM01390 3 93 2.2E-40 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CJD35_RS02585 b7ddf86826057b428125fe16eef52d22 156 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 99 150 0.002 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CJD35_RS02585 b7ddf86826057b428125fe16eef52d22 156 Pfam PF11776 Nickel/cobalt transporter regulator 99 149 3.6E-17 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CJD35_RS02585 b7ddf86826057b428125fe16eef52d22 156 Gene3D G3DSA:3.10.450.160 54 156 9.6E-18 T 28-03-2018 CJD35_RS04795 5b469c1439937fc66404f1cc40ad03d3 497 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 28 460 1.6E-127 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CJD35_RS04795 5b469c1439937fc66404f1cc40ad03d3 497 Pfam PF13742 OB-fold nucleic acid binding domain 27 120 1.5E-25 T 28-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CJD35_RS04795 5b469c1439937fc66404f1cc40ad03d3 497 Pfam PF02601 Exonuclease VII, large subunit 143 458 4.6E-93 T 28-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CJD35_RS04795 5b469c1439937fc66404f1cc40ad03d3 497 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 24 461 27.505 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CJD35_RS04795 5b469c1439937fc66404f1cc40ad03d3 497 Gene3D G3DSA:2.40.50.140 38 129 3.7E-4 T 28-03-2018 CJD35_RS20775 cc567273e391f64032c8b640057251ef 267 Gene3D G3DSA:1.10.12.10 218 259 2.8E-11 T 28-03-2018 IPR014748 Crontonase, C-terminal CJD35_RS20775 cc567273e391f64032c8b640057251ef 267 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CJD35_RS20775 cc567273e391f64032c8b640057251ef 267 SUPERFAMILY SSF52096 3 258 4.69E-73 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS20775 cc567273e391f64032c8b640057251ef 267 Gene3D G3DSA:3.90.226.10 2 217 1.0E-57 T 28-03-2018 CJD35_RS20775 cc567273e391f64032c8b640057251ef 267 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 258 2.6E-50 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS17650 5666d18ff1bc09e78b2faa04ce167b2c 387 SUPERFAMILY SSF53901 1 261 2.76E-66 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS17650 5666d18ff1bc09e78b2faa04ce167b2c 387 Gene3D G3DSA:3.40.47.10 268 384 3.7E-30 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS17650 5666d18ff1bc09e78b2faa04ce167b2c 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CJD35_RS17650 5666d18ff1bc09e78b2faa04ce167b2c 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 5.8E-124 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS17650 5666d18ff1bc09e78b2faa04ce167b2c 387 PIRSF PIRSF000429 1 387 5.3E-116 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS17650 5666d18ff1bc09e78b2faa04ce167b2c 387 Pfam PF00108 Thiolase, N-terminal domain 5 256 8.1E-62 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CJD35_RS17650 5666d18ff1bc09e78b2faa04ce167b2c 387 Pfam PF02803 Thiolase, C-terminal domain 264 385 8.5E-42 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CJD35_RS17650 5666d18ff1bc09e78b2faa04ce167b2c 387 Gene3D G3DSA:3.40.47.10 1 267 1.2E-48 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS17650 5666d18ff1bc09e78b2faa04ce167b2c 387 SUPERFAMILY SSF53901 265 385 3.12E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS08135 393940a3a4ad77fc9b0a2d877b95470f 333 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 259 1.3E-53 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CJD35_RS08135 393940a3a4ad77fc9b0a2d877b95470f 333 PRINTS PR01713 Nucleotide sugar epimerase signature 292 309 1.7E-25 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CJD35_RS08135 393940a3a4ad77fc9b0a2d877b95470f 333 PRINTS PR01713 Nucleotide sugar epimerase signature 253 268 1.7E-25 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CJD35_RS08135 393940a3a4ad77fc9b0a2d877b95470f 333 PRINTS PR01713 Nucleotide sugar epimerase signature 218 233 1.7E-25 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CJD35_RS08135 393940a3a4ad77fc9b0a2d877b95470f 333 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 1.7E-25 T 28-03-2018 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 Reactome: R-HSA-70370 CJD35_RS08135 393940a3a4ad77fc9b0a2d877b95470f 333 SUPERFAMILY SSF51735 1 330 1.11E-82 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS08135 393940a3a4ad77fc9b0a2d877b95470f 333 Gene3D G3DSA:3.40.50.720 2 192 2.6E-38 T 28-03-2018 CJD35_RS08135 393940a3a4ad77fc9b0a2d877b95470f 333 Gene3D G3DSA:3.90.25.10 193 332 6.4E-37 T 28-03-2018 CJD35_RS11195 4a8c21d9c5ccae7bb8230c960bc48504 407 Gene3D G3DSA:1.10.150.130 87 203 1.5E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS11195 4a8c21d9c5ccae7bb8230c960bc48504 407 Pfam PF00589 Phage integrase family 207 368 2.9E-18 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS11195 4a8c21d9c5ccae7bb8230c960bc48504 407 Gene3D G3DSA:1.10.443.10 204 389 1.9E-19 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS11195 4a8c21d9c5ccae7bb8230c960bc48504 407 Pfam PF13356 Arm DNA-binding domain 2 84 8.5E-18 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CJD35_RS11195 4a8c21d9c5ccae7bb8230c960bc48504 407 SUPERFAMILY SSF56349 98 380 1.91E-50 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS03260 ca6d2594922ae79f5cadd7d08509a89f 281 Gene3D G3DSA:1.20.1330.10 38 255 1.0E-22 T 28-03-2018 CJD35_RS03260 ca6d2594922ae79f5cadd7d08509a89f 281 PRINTS PR00207 Flagellin signature 109 132 1.1E-5 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJD35_RS03260 ca6d2594922ae79f5cadd7d08509a89f 281 PRINTS PR00207 Flagellin signature 74 93 1.1E-5 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJD35_RS03260 ca6d2594922ae79f5cadd7d08509a89f 281 PRINTS PR00207 Flagellin signature 35 52 1.1E-5 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJD35_RS03260 ca6d2594922ae79f5cadd7d08509a89f 281 SUPERFAMILY SSF64518 5 280 7.45E-41 T 28-03-2018 CJD35_RS03260 ca6d2594922ae79f5cadd7d08509a89f 281 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 2.5E-14 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJD35_RS03260 ca6d2594922ae79f5cadd7d08509a89f 281 Pfam PF00700 Bacterial flagellin C-terminal helical region 206 278 5.2E-6 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 428 6.7E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 SUPERFAMILY SSF47384 192 273 1.37E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 Gene3D G3DSA:1.10.287.130 179 267 2.3E-10 T 28-03-2018 CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 SMART SM00388 207 273 8.7E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 SMART SM00387 319 430 1.7E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 414 427 1.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 1.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 1.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 1.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 Pfam PF00512 His Kinase A (phospho-acceptor) domain 208 273 3.9E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 Gene3D G3DSA:3.30.565.10 268 430 5.3E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 SMART SM00304 136 188 6.5E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJD35_RS12420 77c5e29e4798722a746133200d5e1e1f 430 SUPERFAMILY SSF55874 262 428 4.32E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 Gene3D G3DSA:3.90.980.10 105 228 9.8E-30 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 SMART SM00400 34 88 2.7E-31 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 SUPERFAMILY SSF56731 114 408 2.09E-82 T 28-03-2018 CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 SUPERFAMILY SSF57783 5 98 3.4E-32 T 28-03-2018 CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 239 2.0E-27 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 TIGRFAM TIGR01391 dnaG: DNA primase 4 401 4.3E-116 T 28-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 Pfam PF13662 Toprim domain 248 310 9.3E-14 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 Hamap MF_00974 DNA primase [dnaG]. 2 525 22.853 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 Gene3D G3DSA:3.90.580.10 1 101 1.4E-31 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 SMART SM00493 247 318 1.2E-7 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 Pfam PF01807 CHC2 zinc finger 5 98 4.1E-34 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS11505 c10590a4474b92852dc62a981975d28d 527 Gene3D G3DSA:3.40.1360.10 229 356 7.3E-30 T 28-03-2018 CJD35_RS01580 d293547fc868b06e4f25b00f8c77498c 253 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CJD35_RS01580 d293547fc868b06e4f25b00f8c77498c 253 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 253 4.6E-43 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS01580 d293547fc868b06e4f25b00f8c77498c 253 SUPERFAMILY SSF52096 3 253 1.11E-67 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS01580 d293547fc868b06e4f25b00f8c77498c 253 Gene3D G3DSA:3.90.226.10 1 253 4.8E-68 T 28-03-2018 CJD35_RS07660 3b2c2daf951d601f7558cc1aab4b674e 256 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 56 146 5.0E-26 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CJD35_RS07660 3b2c2daf951d601f7558cc1aab4b674e 256 Gene3D G3DSA:3.40.1010.10 181 243 9.8E-5 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS07660 3b2c2daf951d601f7558cc1aab4b674e 256 Gene3D G3DSA:3.40.50.720 3 89 5.6E-5 T 28-03-2018 CJD35_RS07660 3b2c2daf951d601f7558cc1aab4b674e 256 SUPERFAMILY SSF53790 192 236 2.04E-6 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS07660 3b2c2daf951d601f7558cc1aab4b674e 256 Gene3D G3DSA:3.30.160.110 90 117 6.5E-15 T 28-03-2018 CJD35_RS07660 3b2c2daf951d601f7558cc1aab4b674e 256 SUPERFAMILY SSF75615 83 150 5.49E-17 T 28-03-2018 CJD35_RS07660 3b2c2daf951d601f7558cc1aab4b674e 256 SUPERFAMILY SSF51735 1 81 1.15E-6 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15840 ad2e6d64c10311f05c27b7f189f7d0ad 193 SUPERFAMILY SSF81452 17 193 3.53E-43 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS15840 ad2e6d64c10311f05c27b7f189f7d0ad 193 Pfam PF00510 Cytochrome c oxidase subunit III 20 192 1.7E-16 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS15840 ad2e6d64c10311f05c27b7f189f7d0ad 193 Gene3D G3DSA:1.20.120.80 14 193 4.0E-42 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS13885 0162b9208f5c020ffd3819fd372b5636 77 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 1 75 20.44 T 28-03-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CJD35_RS13885 0162b9208f5c020ffd3819fd372b5636 77 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 2 74 1.8E-28 T 28-03-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CJD35_RS13885 0162b9208f5c020ffd3819fd372b5636 77 Gene3D G3DSA:3.30.1280.10 1 74 3.0E-27 T 28-03-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CJD35_RS13885 0162b9208f5c020ffd3819fd372b5636 77 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 1 74 6.4E-27 T 28-03-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CJD35_RS13885 0162b9208f5c020ffd3819fd372b5636 77 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 74 2.0E-26 T 28-03-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 CJD35_RS13885 0162b9208f5c020ffd3819fd372b5636 77 SUPERFAMILY SSF82697 1 74 8.55E-26 T 28-03-2018 CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 190 205 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 128 141 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 Pfam PF02954 Bacterial regulatory protein, Fis family 381 412 9.2E-10 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 SUPERFAMILY SSF46689 317 412 3.58E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 Gene3D G3DSA:1.10.8.60 277 336 1.1E-17 T 28-03-2018 CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 SMART SM00382 124 267 1.7E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 379 396 3.1E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 396 416 3.1E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 Pfam PF00158 Sigma-54 interaction domain 110 270 5.3E-62 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 SUPERFAMILY SSF52540 110 346 1.27E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 Gene3D G3DSA:3.40.50.300 105 276 6.0E-22 T 28-03-2018 CJD35_RS03150 111a6925754cc468f99b58d55edbbf56 419 Gene3D G3DSA:1.10.10.60 337 414 3.0E-9 T 28-03-2018 CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 PIRSF PIRSF000183 1 371 1.0E-149 T 28-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 137 7.3E-44 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 SUPERFAMILY SSF51735 137 303 2.39E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 SMART SM01002 149 297 1.5E-89 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 Gene3D G3DSA:3.40.50.720 194 371 6.5E-46 T 28-03-2018 CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 Gene3D G3DSA:3.40.50.720 1 193 6.0E-41 T 28-03-2018 CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 SMART SM01003 4 137 4.5E-74 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 4.4E-82 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 28-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 SUPERFAMILY SSF52283 305 360 2.98E-63 T 28-03-2018 CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 SUPERFAMILY SSF52283 1 137 2.98E-63 T 28-03-2018 CJD35_RS08060 8533e3baeb189c2b5e86336cf01ea2eb 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 3.0E-150 T 28-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 CJD35_RS08070 4aecb267fc248f2b28f4f0275d292f42 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 2.6E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS08070 4aecb267fc248f2b28f4f0275d292f42 245 SUPERFAMILY SSF52172 5 130 4.98E-36 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS08070 4aecb267fc248f2b28f4f0275d292f42 245 SMART SM00862 152 227 3.3E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS08070 4aecb267fc248f2b28f4f0275d292f42 245 Pfam PF00072 Response regulator receiver domain 9 119 2.0E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS08070 4aecb267fc248f2b28f4f0275d292f42 245 Gene3D G3DSA:1.10.10.10 126 231 7.3E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS08070 4aecb267fc248f2b28f4f0275d292f42 245 SUPERFAMILY SSF46894 128 228 3.97E-29 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS08070 4aecb267fc248f2b28f4f0275d292f42 245 Gene3D G3DSA:3.40.50.2300 2 125 4.7E-32 T 28-03-2018 CJD35_RS08070 4aecb267fc248f2b28f4f0275d292f42 245 SMART SM00448 7 118 5.8E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS07700 aaadd7a7f256acc01a3d734c6f206e52 510 SUPERFAMILY SSF103473 474 502 2.62E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS07700 aaadd7a7f256acc01a3d734c6f206e52 510 SUPERFAMILY SSF103473 10 200 2.62E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS07700 aaadd7a7f256acc01a3d734c6f206e52 510 SUPERFAMILY SSF103473 255 427 2.62E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS07700 aaadd7a7f256acc01a3d734c6f206e52 510 Gene3D G3DSA:1.20.1250.20 259 509 1.4E-23 T 28-03-2018 CJD35_RS07700 aaadd7a7f256acc01a3d734c6f206e52 510 Gene3D G3DSA:1.20.1250.20 5 203 4.7E-35 T 28-03-2018 CJD35_RS07700 aaadd7a7f256acc01a3d734c6f206e52 510 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 21 495 1.4E-130 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CJD35_RS07700 aaadd7a7f256acc01a3d734c6f206e52 510 Pfam PF07690 Major Facilitator Superfamily 23 417 3.9E-54 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS08590 33aead6418cb146d95c525c720d268e4 67 SUPERFAMILY SSF46561 2 62 4.71E-21 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08590 33aead6418cb146d95c525c720d268e4 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 2 61 17.287 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08590 33aead6418cb146d95c525c720d268e4 67 ProSitePatterns PS00579 Ribosomal protein L29 signature. 40 54 - T 28-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08590 33aead6418cb146d95c525c720d268e4 67 Pfam PF00831 Ribosomal L29 protein 6 61 2.3E-24 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08590 33aead6418cb146d95c525c720d268e4 67 Gene3D G3DSA:1.10.287.310 2 66 1.2E-23 T 28-03-2018 CJD35_RS08590 33aead6418cb146d95c525c720d268e4 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 61 1.7E-22 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS00150 2411837ee87dc159afe989f739940213 336 SUPERFAMILY SSF54106 57 101 6.15E-9 T 28-03-2018 IPR018392 LysM domain CJD35_RS00150 2411837ee87dc159afe989f739940213 336 SMART SM00257 57 101 4.4E-10 T 28-03-2018 IPR018392 LysM domain CJD35_RS00150 2411837ee87dc159afe989f739940213 336 SMART SM00257 105 149 1.4E-4 T 28-03-2018 IPR018392 LysM domain CJD35_RS00150 2411837ee87dc159afe989f739940213 336 Gene3D G3DSA:3.10.350.10 52 103 5.6E-13 T 28-03-2018 CJD35_RS00150 2411837ee87dc159afe989f739940213 336 Gene3D G3DSA:3.10.350.10 104 154 5.1E-10 T 28-03-2018 CJD35_RS00150 2411837ee87dc159afe989f739940213 336 SUPERFAMILY SSF51261 105 332 1.78E-48 T 28-03-2018 IPR011055 Duplicated hybrid motif CJD35_RS00150 2411837ee87dc159afe989f739940213 336 Gene3D G3DSA:2.70.70.10 180 336 6.9E-38 T 28-03-2018 CJD35_RS00150 2411837ee87dc159afe989f739940213 336 Pfam PF01476 LysM domain 58 101 8.1E-12 T 28-03-2018 IPR018392 LysM domain CJD35_RS00150 2411837ee87dc159afe989f739940213 336 Pfam PF01476 LysM domain 107 149 3.4E-7 T 28-03-2018 IPR018392 LysM domain CJD35_RS00150 2411837ee87dc159afe989f739940213 336 Pfam PF01551 Peptidase family M23 234 328 2.5E-29 T 28-03-2018 IPR016047 Peptidase M23 CJD35_RS21725 d8795e5cf59be1b4cfe00f4251c12b42 391 Gene3D G3DSA:1.20.1600.10 134 321 1.2E-16 T 28-03-2018 CJD35_RS21725 d8795e5cf59be1b4cfe00f4251c12b42 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 93 379 5.9E-46 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CJD35_RS21725 d8795e5cf59be1b4cfe00f4251c12b42 391 SUPERFAMILY SSF111369 97 308 8.11E-16 T 28-03-2018 CJD35_RS21725 d8795e5cf59be1b4cfe00f4251c12b42 391 Gene3D G3DSA:3.90.1170.30 9 133 1.0E-4 T 28-03-2018 CJD35_RS21725 d8795e5cf59be1b4cfe00f4251c12b42 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 80 299 5.2E-26 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJD35_RS10580 8c6f9a44281af83a0c0b498c11273293 203 Pfam PF00005 ABC transporter 22 148 1.0E-16 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS10580 8c6f9a44281af83a0c0b498c11273293 203 Gene3D G3DSA:3.40.50.300 2 195 9.4E-33 T 28-03-2018 CJD35_RS10580 8c6f9a44281af83a0c0b498c11273293 203 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 6 184 2.2E-44 T 28-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 CJD35_RS10580 8c6f9a44281af83a0c0b498c11273293 203 SUPERFAMILY SSF52540 5 180 1.09E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS10580 8c6f9a44281af83a0c0b498c11273293 203 SMART SM00382 30 200 1.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 Gene3D G3DSA:3.30.9.10 186 318 2.5E-32 T 28-03-2018 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 Gene3D G3DSA:3.30.9.10 83 185 2.3E-18 T 28-03-2018 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 357 2.8E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 2.8E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 2.8E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 79 91 2.8E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 2.8E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 2.8E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 380 476 9.4E-12 T 28-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 Gene3D G3DSA:3.40.50.720 4 77 4.3E-8 T 28-03-2018 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 350 360 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 Pfam PF01266 FAD dependent oxidoreductase 6 321 3.3E-48 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CJD35_RS17930 30b6b5d346f46b567d0859324c588f2d 496 SUPERFAMILY SSF51905 5 295 4.86E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 SUPERFAMILY SSF101353 246 460 3.79E-59 T 28-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 PRINTS PR00980 Alanyl-tRNA synthetase signature 298 311 2.5E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 PRINTS PR00980 Alanyl-tRNA synthetase signature 75 86 2.5E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 2.5E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 2.5E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 PRINTS PR00980 Alanyl-tRNA synthetase signature 274 290 2.5E-32 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 SMART SM00863 654 702 1.1E-18 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 Pfam PF01411 tRNA synthetases class II (A) 6 556 1.8E-211 T 28-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 SUPERFAMILY SSF55681 3 245 1.22E-107 T 28-03-2018 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 Pfam PF02272 DHHA1 domain 740 879 3.9E-16 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 884 194.441 T 28-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 863 7.4E-280 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 Gene3D G3DSA:3.30.930.10 1 242 2.1E-110 T 28-03-2018 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 SUPERFAMILY SSF55186 553 710 9.29E-47 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 SUPERFAMILY SSF50447 453 553 3.21E-16 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 702 6.2E-16 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CJD35_RS13225 9afb8dcac1bf505a81c207f8db2ae44e 885 Gene3D G3DSA:3.30.980.10 554 719 2.6E-42 T 28-03-2018 CJD35_RS20595 887b82c92a2b26629ce28ec0b3a08aed 194 Gene3D G3DSA:3.40.1260.10 63 193 4.1E-20 T 28-03-2018 CJD35_RS20595 887b82c92a2b26629ce28ec0b3a08aed 194 SUPERFAMILY SSF75169 66 192 7.36E-16 T 28-03-2018 IPR027396 DsrEFH-like CJD35_RS20595 887b82c92a2b26629ce28ec0b3a08aed 194 Pfam PF02635 DsrE/DsrF-like family 70 192 3.5E-13 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CJD35_RS09735 b18cdc7f39b5e0961061655ae0266499 84 SUPERFAMILY SSF51344 1 83 1.57E-20 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09735 b18cdc7f39b5e0961061655ae0266499 84 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 3 83 3.3E-24 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09735 b18cdc7f39b5e0961061655ae0266499 84 Gene3D G3DSA:2.60.15.10 1 84 2.2E-24 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09735 b18cdc7f39b5e0961061655ae0266499 84 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 8 81 8.0E-25 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09735 b18cdc7f39b5e0961061655ae0266499 84 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 1 84 10.425 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09735 b18cdc7f39b5e0961061655ae0266499 84 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 83 2.8E-20 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS00115 629084b256a21568a7df8540f5455c19 124 Gene3D G3DSA:2.40.10.220 6 123 6.9E-8 T 28-03-2018 CJD35_RS00115 629084b256a21568a7df8540f5455c19 124 Pfam PF07238 PilZ domain 36 96 9.0E-6 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CJD35_RS00115 629084b256a21568a7df8540f5455c19 124 SUPERFAMILY SSF141371 37 90 1.18E-5 T 28-03-2018 CJD35_RS20325 7e25116b27aa06c0a06970d69784f6da 352 SUPERFAMILY SSF51713 71 248 8.11E-11 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CJD35_RS20325 7e25116b27aa06c0a06970d69784f6da 352 Gene3D G3DSA:3.20.20.105 18 286 1.2E-24 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CJD35_RS10080 d13c4a9edbab42a7cb888b82ddae411e 40 Gene3D G3DSA:1.10.10.60 1 39 1.2E-5 T 28-03-2018 CJD35_RS13425 f1a475dd9199cce95998e3024ae22843 151 Pfam PF00582 Universal stress protein family 3 139 1.3E-13 T 28-03-2018 IPR006016 UspA GO:0006950 CJD35_RS13425 f1a475dd9199cce95998e3024ae22843 151 SUPERFAMILY SSF52402 2 140 1.84E-13 T 28-03-2018 CJD35_RS13425 f1a475dd9199cce95998e3024ae22843 151 Gene3D G3DSA:3.40.50.620 1 141 2.3E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS05810 ee5245493805cf6f38d6078d0411d094 360 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 252 274 5.7E-8 T 28-03-2018 CJD35_RS05810 ee5245493805cf6f38d6078d0411d094 360 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.7E-8 T 28-03-2018 CJD35_RS05810 ee5245493805cf6f38d6078d0411d094 360 SUPERFAMILY SSF51905 260 320 2.71E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05810 ee5245493805cf6f38d6078d0411d094 360 SUPERFAMILY SSF51905 7 160 2.71E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05810 ee5245493805cf6f38d6078d0411d094 360 Gene3D G3DSA:3.50.50.60 7 331 3.0E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05810 ee5245493805cf6f38d6078d0411d094 360 Pfam PF01494 FAD binding domain 7 68 9.3E-7 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CJD35_RS18045 f2629d7ee84133be5d432a28550cf0bd 658 SUPERFAMILY SSF56091 54 243 4.32E-46 T 28-03-2018 CJD35_RS18045 f2629d7ee84133be5d432a28550cf0bd 658 Gene3D G3DSA:3.30.470.30 34 191 2.8E-34 T 28-03-2018 CJD35_RS18045 f2629d7ee84133be5d432a28550cf0bd 658 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 375 620 5.4E-90 T 28-03-2018 IPR014145 DNA ligase D, polymerase domain CJD35_RS18045 f2629d7ee84133be5d432a28550cf0bd 658 Pfam PF01068 ATP dependent DNA ligase domain 75 242 1.1E-25 T 28-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 CJD35_RS18045 f2629d7ee84133be5d432a28550cf0bd 658 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 72 641 7.7E-188 T 28-03-2018 IPR014143 DNA ligase D CJD35_RS18045 f2629d7ee84133be5d432a28550cf0bd 658 SUPERFAMILY SSF50249 243 349 1.76E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS18045 f2629d7ee84133be5d432a28550cf0bd 658 Gene3D G3DSA:3.30.1490.70 192 232 7.3E-10 T 28-03-2018 CJD35_RS18045 f2629d7ee84133be5d432a28550cf0bd 658 Gene3D G3DSA:2.40.50.140 233 354 2.4E-30 T 28-03-2018 CJD35_RS18045 f2629d7ee84133be5d432a28550cf0bd 658 Pfam PF04679 ATP dependent DNA ligase C terminal region 260 352 1.7E-24 T 28-03-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 CJD35_RS18045 f2629d7ee84133be5d432a28550cf0bd 658 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 64 358 2.7E-97 T 28-03-2018 IPR014146 DNA ligase D, ligase domain CJD35_RS21165 f2629d7ee84133be5d432a28550cf0bd 658 SUPERFAMILY SSF56091 54 243 4.32E-46 T 28-03-2018 CJD35_RS21165 f2629d7ee84133be5d432a28550cf0bd 658 Gene3D G3DSA:3.30.470.30 34 191 2.8E-34 T 28-03-2018 CJD35_RS21165 f2629d7ee84133be5d432a28550cf0bd 658 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 375 620 5.4E-90 T 28-03-2018 IPR014145 DNA ligase D, polymerase domain CJD35_RS21165 f2629d7ee84133be5d432a28550cf0bd 658 Pfam PF01068 ATP dependent DNA ligase domain 75 242 1.1E-25 T 28-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 CJD35_RS21165 f2629d7ee84133be5d432a28550cf0bd 658 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 72 641 7.7E-188 T 28-03-2018 IPR014143 DNA ligase D CJD35_RS21165 f2629d7ee84133be5d432a28550cf0bd 658 SUPERFAMILY SSF50249 243 349 1.76E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS21165 f2629d7ee84133be5d432a28550cf0bd 658 Gene3D G3DSA:3.30.1490.70 192 232 7.3E-10 T 28-03-2018 CJD35_RS21165 f2629d7ee84133be5d432a28550cf0bd 658 Gene3D G3DSA:2.40.50.140 233 354 2.4E-30 T 28-03-2018 CJD35_RS21165 f2629d7ee84133be5d432a28550cf0bd 658 Pfam PF04679 ATP dependent DNA ligase C terminal region 260 352 1.7E-24 T 28-03-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 CJD35_RS21165 f2629d7ee84133be5d432a28550cf0bd 658 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 64 358 2.7E-97 T 28-03-2018 IPR014146 DNA ligase D, ligase domain CJD35_RS16115 da99d5df605338de47861b6f7388375e 671 SMART SM00470 8 106 2.2E-12 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS16115 da99d5df605338de47861b6f7388375e 671 Gene3D G3DSA:3.90.1530.10 1 106 1.4E-17 T 28-03-2018 CJD35_RS16115 da99d5df605338de47861b6f7388375e 671 Gene3D G3DSA:1.10.10.730 107 154 2.6E-10 T 28-03-2018 CJD35_RS16115 da99d5df605338de47861b6f7388375e 671 SUPERFAMILY SSF110849 8 108 6.28E-12 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS16115 da99d5df605338de47861b6f7388375e 671 Pfam PF02195 ParB-like nuclease domain 10 105 7.0E-11 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS16115 da99d5df605338de47861b6f7388375e 671 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 8 181 5.8E-20 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CJD35_RS16115 da99d5df605338de47861b6f7388375e 671 SUPERFAMILY SSF109709 99 194 2.35E-21 T 28-03-2018 CJD35_RS17880 db0d33a740c56b94c5c4a0df9e98e0d0 160 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 16 74 5.9E-10 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS17880 db0d33a740c56b94c5c4a0df9e98e0d0 160 Gene3D G3DSA:1.10.150.120 85 160 1.1E-25 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS17880 db0d33a740c56b94c5c4a0df9e98e0d0 160 SUPERFAMILY SSF47741 94 160 3.14E-26 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS17880 db0d33a740c56b94c5c4a0df9e98e0d0 160 Pfam PF01799 [2Fe-2S] binding domain 83 156 5.3E-23 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS17880 db0d33a740c56b94c5c4a0df9e98e0d0 160 Gene3D G3DSA:3.10.20.30 9 84 2.0E-28 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS17880 db0d33a740c56b94c5c4a0df9e98e0d0 160 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 49 57 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CJD35_RS17880 db0d33a740c56b94c5c4a0df9e98e0d0 160 SUPERFAMILY SSF54292 8 95 6.82E-26 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 Gene3D G3DSA:3.30.450.20 19 127 3.4E-4 T 28-03-2018 CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 Gene3D G3DSA:3.30.565.10 186 367 6.1E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 366 5.7E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 SMART SM00387 245 368 9.0E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 SUPERFAMILY SSF55874 209 365 4.7E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 201 3.2E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 Gene3D G3DSA:1.10.287.130 128 185 1.3E-9 T 28-03-2018 CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 SUPERFAMILY SSF47384 145 199 1.08E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 SMART SM00388 141 204 3.4E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 326 3.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 298 312 3.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 345 3.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14115 cf8f7daa2d579c860fd13eb9bcc13c9e 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 365 3.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS12025 c3a4b64be4b5c056e0c38ed1230f3ffb 340 Pfam PF07063 Domain of unknown function (DUF1338) 49 334 2.2E-52 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 CJD35_RS12025 c3a4b64be4b5c056e0c38ed1230f3ffb 340 SMART SM01150 45 335 6.4E-68 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 CJD35_RS17665 ae6fe2cfa945d82446a9c0b827800daa 230 Pfam PF01066 CDP-alcohol phosphatidyltransferase 39 109 7.2E-9 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CJD35_RS13845 940db76726ca482d2b347ab9179ec0de 305 SUPERFAMILY SSF53850 90 288 1.85E-39 T 28-03-2018 CJD35_RS13845 940db76726ca482d2b347ab9179ec0de 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.0E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS13845 940db76726ca482d2b347ab9179ec0de 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS13845 940db76726ca482d2b347ab9179ec0de 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS13845 940db76726ca482d2b347ab9179ec0de 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS13845 940db76726ca482d2b347ab9179ec0de 305 Gene3D G3DSA:1.10.10.10 3 87 1.3E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS13845 940db76726ca482d2b347ab9179ec0de 305 Pfam PF03466 LysR substrate binding domain 85 287 8.4E-37 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS13845 940db76726ca482d2b347ab9179ec0de 305 SUPERFAMILY SSF46785 3 81 5.69E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS13845 940db76726ca482d2b347ab9179ec0de 305 Gene3D G3DSA:3.40.190.10 172 259 9.6E-18 T 28-03-2018 CJD35_RS13845 940db76726ca482d2b347ab9179ec0de 305 Gene3D G3DSA:3.40.190.10 90 171 2.4E-14 T 28-03-2018 CJD35_RS08645 9c9cd38a1475be6b1d7c759c60a87581 177 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 151 19.409 T 28-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CJD35_RS08645 9c9cd38a1475be6b1d7c759c60a87581 177 ProSitePatterns PS00475 Ribosomal protein L15 signature. 115 145 - T 28-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08645 9c9cd38a1475be6b1d7c759c60a87581 177 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 149 3.8E-33 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P CJD35_RS08645 9c9cd38a1475be6b1d7c759c60a87581 177 SUPERFAMILY SSF52080 4 151 3.14E-40 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P CJD35_RS08645 9c9cd38a1475be6b1d7c759c60a87581 177 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 149 1.6E-42 T 28-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08645 9c9cd38a1475be6b1d7c759c60a87581 177 Gene3D G3DSA:3.100.10.10 40 168 9.4E-28 T 28-03-2018 CJD35_RS00575 432eeb0d843eec76509cffa05dc93a6e 163 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 7 158 42.304 T 28-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CJD35_RS00575 432eeb0d843eec76509cffa05dc93a6e 163 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 157 4.8E-35 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CJD35_RS00575 432eeb0d843eec76509cffa05dc93a6e 163 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 74 2.6E-9 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CJD35_RS00575 432eeb0d843eec76509cffa05dc93a6e 163 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 79 158 2.1E-32 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CJD35_RS00575 432eeb0d843eec76509cffa05dc93a6e 163 SUPERFAMILY SSF53155 4 83 7.65E-20 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CJD35_RS00575 432eeb0d843eec76509cffa05dc93a6e 163 Gene3D G3DSA:1.10.10.10 74 159 1.0E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS00575 432eeb0d843eec76509cffa05dc93a6e 163 Gene3D G3DSA:3.30.160.70 1 73 1.9E-21 T 28-03-2018 CJD35_RS00575 432eeb0d843eec76509cffa05dc93a6e 163 SUPERFAMILY SSF46767 77 158 1.14E-31 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CJD35_RS08585 64a68d34090fbd73c92c2bdb00f2add5 143 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.435 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08585 64a68d34090fbd73c92c2bdb00f2add5 143 PRINTS PR00060 Ribosomal protein L16 signature 42 53 2.3E-37 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08585 64a68d34090fbd73c92c2bdb00f2add5 143 PRINTS PR00060 Ribosomal protein L16 signature 58 87 2.3E-37 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08585 64a68d34090fbd73c92c2bdb00f2add5 143 PRINTS PR00060 Ribosomal protein L16 signature 24 36 2.3E-37 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08585 64a68d34090fbd73c92c2bdb00f2add5 143 PRINTS PR00060 Ribosomal protein L16 signature 88 117 2.3E-37 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08585 64a68d34090fbd73c92c2bdb00f2add5 143 Gene3D G3DSA:3.90.1170.10 1 138 2.3E-48 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CJD35_RS08585 64a68d34090fbd73c92c2bdb00f2add5 143 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08585 64a68d34090fbd73c92c2bdb00f2add5 143 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 8.3E-56 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08585 64a68d34090fbd73c92c2bdb00f2add5 143 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.2E-47 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CJD35_RS08585 64a68d34090fbd73c92c2bdb00f2add5 143 SUPERFAMILY SSF54686 1 134 1.18E-54 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CJD35_RS05970 baae3ad5a0fb70ba09523efb3f19de25 224 Gene3D G3DSA:3.40.50.1000 80 224 3.7E-17 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS05970 baae3ad5a0fb70ba09523efb3f19de25 224 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 195 1.4E-17 T 28-03-2018 CJD35_RS05970 baae3ad5a0fb70ba09523efb3f19de25 224 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 195 1.3E-26 T 28-03-2018 CJD35_RS05970 baae3ad5a0fb70ba09523efb3f19de25 224 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 208 3.0E-30 T 28-03-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like CJD35_RS05970 baae3ad5a0fb70ba09523efb3f19de25 224 SUPERFAMILY SSF56784 2 216 3.05E-21 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS21445 4a720c87f44ca5b10814d3bfbf3f2779 337 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 226 322 1.3E-16 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CJD35_RS21445 4a720c87f44ca5b10814d3bfbf3f2779 337 SMART SM01092 225 323 6.4E-29 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CJD35_RS21445 4a720c87f44ca5b10814d3bfbf3f2779 337 Gene3D G3DSA:3.30.390.50 222 332 4.4E-25 T 28-03-2018 CJD35_RS21445 4a720c87f44ca5b10814d3bfbf3f2779 337 Gene3D G3DSA:3.30.43.10 1 50 1.7E-20 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CJD35_RS21445 4a720c87f44ca5b10814d3bfbf3f2779 337 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 218 6.4E-50 T 28-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CJD35_RS21445 4a720c87f44ca5b10814d3bfbf3f2779 337 SUPERFAMILY SSF56176 1 218 3.87E-63 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJD35_RS21445 4a720c87f44ca5b10814d3bfbf3f2779 337 SUPERFAMILY SSF55447 224 323 3.92E-28 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CJD35_RS21445 4a720c87f44ca5b10814d3bfbf3f2779 337 Gene3D G3DSA:3.30.465.10 135 219 3.4E-15 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJD35_RS21445 4a720c87f44ca5b10814d3bfbf3f2779 337 Gene3D G3DSA:3.30.465.10 54 133 2.7E-14 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJD35_RS18325 4a720c87f44ca5b10814d3bfbf3f2779 337 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 226 322 1.3E-16 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CJD35_RS18325 4a720c87f44ca5b10814d3bfbf3f2779 337 SMART SM01092 225 323 6.4E-29 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CJD35_RS18325 4a720c87f44ca5b10814d3bfbf3f2779 337 Gene3D G3DSA:3.30.390.50 222 332 4.4E-25 T 28-03-2018 CJD35_RS18325 4a720c87f44ca5b10814d3bfbf3f2779 337 Gene3D G3DSA:3.30.43.10 1 50 1.7E-20 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CJD35_RS18325 4a720c87f44ca5b10814d3bfbf3f2779 337 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 218 6.4E-50 T 28-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CJD35_RS18325 4a720c87f44ca5b10814d3bfbf3f2779 337 SUPERFAMILY SSF56176 1 218 3.87E-63 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJD35_RS18325 4a720c87f44ca5b10814d3bfbf3f2779 337 SUPERFAMILY SSF55447 224 323 3.92E-28 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CJD35_RS18325 4a720c87f44ca5b10814d3bfbf3f2779 337 Gene3D G3DSA:3.30.465.10 135 219 3.4E-15 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJD35_RS18325 4a720c87f44ca5b10814d3bfbf3f2779 337 Gene3D G3DSA:3.30.465.10 54 133 2.7E-14 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJD35_RS00455 645812535627141e25111e5c4718e084 578 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 281 445 1.5E-23 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS00455 645812535627141e25111e5c4718e084 578 Gene3D G3DSA:2.40.110.10 158 266 8.3E-24 T 28-03-2018 CJD35_RS00455 645812535627141e25111e5c4718e084 578 Gene3D G3DSA:1.10.540.10 30 157 3.5E-19 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS00455 645812535627141e25111e5c4718e084 578 SUPERFAMILY SSF56645 38 278 3.8E-57 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS00455 645812535627141e25111e5c4718e084 578 Pfam PF12418 Acyl-CoA dehydrogenase N terminal 3 29 3.3E-5 T 28-03-2018 IPR020953 Acyl-CoA dehydrogenase, N-terminal, bacteria CJD35_RS00455 645812535627141e25111e5c4718e084 578 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 160 270 1.3E-17 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS00455 645812535627141e25111e5c4718e084 578 Pfam PF12806 Acetyl-CoA dehydrogenase C-terminal like 461 573 6.3E-23 T 28-03-2018 IPR025878 Acetyl-CoA dehydrogenase-like C-terminal domain CJD35_RS00455 645812535627141e25111e5c4718e084 578 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 39 156 4.0E-12 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS00455 645812535627141e25111e5c4718e084 578 SUPERFAMILY SSF47203 286 461 1.93E-47 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS00455 645812535627141e25111e5c4718e084 578 Gene3D G3DSA:1.20.140.10 267 461 2.0E-40 T 28-03-2018 CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 Gene3D G3DSA:3.40.50.880 1 189 1.8E-59 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.1E-12 T 28-03-2018 CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 162 175 2.1E-12 T 28-03-2018 CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 2.1E-12 T 28-03-2018 CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 184 1.2E-60 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 SUPERFAMILY SSF52317 1 185 6.22E-56 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 PRINTS PR00097 Anthranilate synthase component II signature 162 175 5.0E-35 T 28-03-2018 CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.0E-35 T 28-03-2018 CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.0E-35 T 28-03-2018 CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.0E-35 T 28-03-2018 CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.0E-35 T 28-03-2018 CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 PRINTS PR00097 Anthranilate synthase component II signature 75 86 5.0E-35 T 28-03-2018 CJD35_RS14285 47cc4a8938db7d8d1eb17512e52118a6 196 Pfam PF00117 Glutamine amidotransferase class-I 3 183 3.5E-51 T 28-03-2018 IPR017926 Glutamine amidotransferase CJD35_RS06875 4279113ada6e301b13102258e64d35b6 476 Pfam PF06863 Protein of unknown function (DUF1254) 73 202 1.3E-31 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 CJD35_RS06875 4279113ada6e301b13102258e64d35b6 476 SUPERFAMILY SSF160935 26 462 2.48E-104 T 28-03-2018 CJD35_RS06875 4279113ada6e301b13102258e64d35b6 476 Gene3D G3DSA:2.60.120.600 298 470 1.6E-48 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 CJD35_RS06875 4279113ada6e301b13102258e64d35b6 476 Pfam PF06742 Protein of unknown function (DUF1214) 338 446 3.4E-35 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 CJD35_RS06875 4279113ada6e301b13102258e64d35b6 476 Gene3D G3DSA:1.10.3360.10 199 297 7.5E-9 T 28-03-2018 CJD35_RS06875 4279113ada6e301b13102258e64d35b6 476 Gene3D G3DSA:2.60.40.1610 73 198 1.3E-34 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 122 6.5E-24 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 SMART SM00841 130 185 8.3E-23 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 SMART SM01185 68 122 1.7E-27 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 Gene3D G3DSA:2.40.50.140 66 127 4.0E-26 T 28-03-2018 CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 4.2E-20 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 SUPERFAMILY SSF50249 66 130 4.28E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 Gene3D G3DSA:2.40.50.140 130 185 4.9E-19 T 28-03-2018 CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 SUPERFAMILY SSF50249 129 186 2.23E-13 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 TIGRFAM TIGR00038 efp: translation elongation factor P 4 186 3.9E-68 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 SUPERFAMILY SSF50104 5 63 4.75E-16 T 28-03-2018 IPR008991 Translation protein SH3-like domain CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 Hamap MF_00141 Elongation factor P [efp]. 2 186 42.457 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 Pfam PF09285 Elongation factor P, C-terminal 130 185 9.8E-19 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 PIRSF PIRSF005901 1 187 2.6E-66 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP CJD35_RS14455 e4ceff11441248535298d04d73bc6560 187 Gene3D G3DSA:2.30.30.30 3 62 2.6E-20 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CJD35_RS16520 538275e8fd74a26412f0336959f09be7 602 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 505 594 2.5E-12 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CJD35_RS16520 538275e8fd74a26412f0336959f09be7 602 SUPERFAMILY SSF52540 269 533 7.14E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS16520 538275e8fd74a26412f0336959f09be7 602 SMART SM00382 36 235 1.2E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS16520 538275e8fd74a26412f0336959f09be7 602 SMART SM00382 312 512 6.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS16520 538275e8fd74a26412f0336959f09be7 602 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 506 574 1.4E-12 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CJD35_RS16520 538275e8fd74a26412f0336959f09be7 602 Pfam PF00005 ABC transporter 28 185 1.0E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS16520 538275e8fd74a26412f0336959f09be7 602 Pfam PF00005 ABC transporter 303 455 1.1E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS16520 538275e8fd74a26412f0336959f09be7 602 Gene3D G3DSA:3.40.50.300 3 268 6.0E-61 T 28-03-2018 CJD35_RS16520 538275e8fd74a26412f0336959f09be7 602 Gene3D G3DSA:3.40.50.300 276 600 2.5E-62 T 28-03-2018 CJD35_RS16520 538275e8fd74a26412f0336959f09be7 602 ProSitePatterns PS00211 ABC transporters family signature. 427 441 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS16520 538275e8fd74a26412f0336959f09be7 602 SUPERFAMILY SSF52540 8 257 1.78E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13305 ec14bd422fa34fb35e8c3f4ca244d266 334 SUPERFAMILY SSF52922 202 333 1.19E-39 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS13305 ec14bd422fa34fb35e8c3f4ca244d266 334 Pfam PF02779 Transketolase, pyrimidine binding domain 2 175 3.9E-44 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS13305 ec14bd422fa34fb35e8c3f4ca244d266 334 Pfam PF02780 Transketolase, C-terminal domain 207 324 3.2E-33 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CJD35_RS13305 ec14bd422fa34fb35e8c3f4ca244d266 334 Gene3D G3DSA:3.40.50.920 208 333 2.8E-31 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS13305 ec14bd422fa34fb35e8c3f4ca244d266 334 Gene3D G3DSA:3.40.50.970 1 207 3.7E-66 T 28-03-2018 CJD35_RS13305 ec14bd422fa34fb35e8c3f4ca244d266 334 SUPERFAMILY SSF52518 1 179 9.1E-66 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS13305 ec14bd422fa34fb35e8c3f4ca244d266 334 SMART SM00861 1 176 5.4E-63 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS17690 e3ac1ec7cbe041a38e36b5ea9b29a3a3 290 Gene3D G3DSA:3.20.20.140 13 284 3.5E-44 T 28-03-2018 CJD35_RS17690 e3ac1ec7cbe041a38e36b5ea9b29a3a3 290 SUPERFAMILY SSF51556 11 289 7.7E-61 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS17690 e3ac1ec7cbe041a38e36b5ea9b29a3a3 290 Pfam PF04909 Amidohydrolase 11 289 8.1E-44 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS14925 30f52dc05b4e5da9a2908fe9a70526b3 293 Gene3D G3DSA:3.40.50.300 16 292 2.0E-50 T 28-03-2018 CJD35_RS14925 30f52dc05b4e5da9a2908fe9a70526b3 293 SUPERFAMILY SSF52540 4 250 6.25E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06530 0677a17e56163e6d44f9631b46822783 324 Gene3D G3DSA:1.10.10.60 265 324 9.9E-14 T 28-03-2018 CJD35_RS06530 0677a17e56163e6d44f9631b46822783 324 Pfam PF12833 Helix-turn-helix domain 237 317 1.8E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS06530 0677a17e56163e6d44f9631b46822783 324 SMART SM00342 231 316 2.8E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS06530 0677a17e56163e6d44f9631b46822783 324 Gene3D G3DSA:1.10.10.60 212 264 6.1E-5 T 28-03-2018 CJD35_RS06530 0677a17e56163e6d44f9631b46822783 324 SUPERFAMILY SSF46689 266 319 2.37E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS06530 0677a17e56163e6d44f9631b46822783 324 Pfam PF14525 AraC-binding-like domain 27 199 1.0E-14 T 28-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CJD35_RS06530 0677a17e56163e6d44f9631b46822783 324 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 267 312 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CJD35_RS06530 0677a17e56163e6d44f9631b46822783 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 285 300 7.9E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS06530 0677a17e56163e6d44f9631b46822783 324 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 300 316 7.9E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS12350 d2cedce5a46177195c61f27c0b2279e8 377 SUPERFAMILY SSF53448 41 259 5.16E-14 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS12350 d2cedce5a46177195c61f27c0b2279e8 377 Gene3D G3DSA:3.90.550.10 46 259 3.7E-10 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS12350 d2cedce5a46177195c61f27c0b2279e8 377 Pfam PF13506 Glycosyl transferase family 21 89 231 1.0E-8 T 28-03-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 CJD35_RS15395 26de582299774e50e2d7cfdf95e40a0e 360 TIGRFAM TIGR03857 F420_MSMEG_2249: probable F420-dependent oxidoreductase, MSMEG_2249 family 17 343 2.4E-121 T 28-03-2018 IPR022378 F420-dependent oxidoreductase-predicted, MSMEG2249 CJD35_RS15395 26de582299774e50e2d7cfdf95e40a0e 360 Gene3D G3DSA:3.20.20.30 14 356 2.3E-60 T 28-03-2018 CJD35_RS15395 26de582299774e50e2d7cfdf95e40a0e 360 SUPERFAMILY SSF51679 16 343 1.7E-57 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS15395 26de582299774e50e2d7cfdf95e40a0e 360 Pfam PF00296 Luciferase-like monooxygenase 26 333 9.3E-47 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS00645 50f7416f63a4c65b8430942d2bb0bd7d 449 Pfam PF04055 Radical SAM superfamily 157 328 1.2E-26 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS00645 50f7416f63a4c65b8430942d2bb0bd7d 449 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 156 176 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CJD35_RS00645 50f7416f63a4c65b8430942d2bb0bd7d 449 Pfam PF00919 Uncharacterized protein family UPF0004 13 109 9.9E-28 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CJD35_RS00645 50f7416f63a4c65b8430942d2bb0bd7d 449 SMART SM00729 152 372 7.5E-56 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS00645 50f7416f63a4c65b8430942d2bb0bd7d 449 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 12 443 6.2E-139 T 28-03-2018 CJD35_RS00645 50f7416f63a4c65b8430942d2bb0bd7d 449 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 11 444 66.877 T 28-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CJD35_RS00645 50f7416f63a4c65b8430942d2bb0bd7d 449 Gene3D G3DSA:3.20.20.70 74 448 3.2E-45 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS00645 50f7416f63a4c65b8430942d2bb0bd7d 449 Pfam PF01938 TRAM domain 385 443 5.6E-5 T 28-03-2018 IPR002792 TRAM domain CJD35_RS00645 50f7416f63a4c65b8430942d2bb0bd7d 449 SUPERFAMILY SSF102114 132 376 1.14E-56 T 28-03-2018 CJD35_RS00645 50f7416f63a4c65b8430942d2bb0bd7d 449 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 12 441 6.3E-140 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CJD35_RS10330 3c1dbaccdf3a91c14896548d76b5a5e0 240 Pfam PF05036 Sporulation related domain 164 239 1.3E-7 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS10330 3c1dbaccdf3a91c14896548d76b5a5e0 240 Gene3D G3DSA:3.30.70.1070 160 240 2.7E-8 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS17250 e1b3fe15cf51858e2d42315bf3ae3d04 1150 SUPERFAMILY SSF53323 712 954 7.59E-24 T 28-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CJD35_RS17250 e1b3fe15cf51858e2d42315bf3ae3d04 1150 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 449 535 6.3E-6 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CJD35_RS17250 e1b3fe15cf51858e2d42315bf3ae3d04 1150 SUPERFAMILY SSF52518 429 614 1.28E-12 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS17250 e1b3fe15cf51858e2d42315bf3ae3d04 1150 Gene3D G3DSA:3.40.50.970 13 261 2.4E-16 T 28-03-2018 CJD35_RS17250 e1b3fe15cf51858e2d42315bf3ae3d04 1150 SUPERFAMILY SSF52922 269 392 1.4E-10 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS17250 e1b3fe15cf51858e2d42315bf3ae3d04 1150 Gene3D G3DSA:3.40.50.970 434 615 6.1E-26 T 28-03-2018 CJD35_RS17250 e1b3fe15cf51858e2d42315bf3ae3d04 1150 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 721 907 4.0E-22 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CJD35_RS17250 e1b3fe15cf51858e2d42315bf3ae3d04 1150 Gene3D G3DSA:3.40.50.920 265 420 4.9E-10 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS17250 e1b3fe15cf51858e2d42315bf3ae3d04 1150 Gene3D G3DSA:3.40.920.10 711 922 4.7E-41 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CJD35_RS17250 e1b3fe15cf51858e2d42315bf3ae3d04 1150 SUPERFAMILY SSF52518 16 201 7.65E-15 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS10855 ec886256c8bc458f6b3ede9d048e7c48 725 SUPERFAMILY SSF48179 503 619 4.0E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS10855 ec886256c8bc458f6b3ede9d048e7c48 725 Gene3D G3DSA:3.90.226.10 1 210 1.6E-51 T 28-03-2018 CJD35_RS10855 ec886256c8bc458f6b3ede9d048e7c48 725 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 324 501 1.6E-57 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS10855 ec886256c8bc458f6b3ede9d048e7c48 725 SUPERFAMILY SSF48179 628 716 1.87E-23 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS10855 ec886256c8bc458f6b3ede9d048e7c48 725 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 208 1.1E-31 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS10855 ec886256c8bc458f6b3ede9d048e7c48 725 SUPERFAMILY SSF51735 324 502 1.21E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10855 ec886256c8bc458f6b3ede9d048e7c48 725 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 504 600 3.6E-22 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS10855 ec886256c8bc458f6b3ede9d048e7c48 725 SUPERFAMILY SSF52096 2 314 1.54E-63 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS10855 ec886256c8bc458f6b3ede9d048e7c48 725 Gene3D G3DSA:1.10.1040.10 627 716 5.2E-17 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS10855 ec886256c8bc458f6b3ede9d048e7c48 725 Gene3D G3DSA:1.10.1040.10 503 605 3.7E-20 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS10855 ec886256c8bc458f6b3ede9d048e7c48 725 Gene3D G3DSA:3.40.50.720 263 502 3.8E-61 T 28-03-2018 CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 Gene3D G3DSA:2.160.10.10 236 297 3.6E-11 T 28-03-2018 CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 1 431 36.667 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 Pfam PF12804 MobA-like NTP transferase domain 3 128 1.5E-21 T 28-03-2018 IPR025877 MobA-like NTP transferase CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 Gene3D G3DSA:3.90.550.10 1 235 2.5E-46 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 2 432 1.0E-144 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 305 333 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 SUPERFAMILY SSF53448 2 244 1.02E-52 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 375 408 2.6E-8 T 28-03-2018 IPR001451 Hexapeptide repeat CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 Gene3D G3DSA:2.160.10.10 298 417 1.9E-31 T 28-03-2018 CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 297 331 4.5E-4 T 28-03-2018 IPR001451 Hexapeptide repeat CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 261 295 2.1E-6 T 28-03-2018 IPR001451 Hexapeptide repeat CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 382 410 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CJD35_RS01570 704a5626e720486722aad14fa4e09124 443 SUPERFAMILY SSF51161 245 425 5.89E-47 T 28-03-2018 IPR011004 Trimeric LpxA-like CJD35_RS06855 e9c20cd63db0061cc6525fa2ac778e68 412 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 135 2.8E-13 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS06855 e9c20cd63db0061cc6525fa2ac778e68 412 SUPERFAMILY SSF56645 2 265 2.49E-64 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS06855 e9c20cd63db0061cc6525fa2ac778e68 412 Gene3D G3DSA:1.20.140.10 246 411 9.7E-44 T 28-03-2018 CJD35_RS06855 e9c20cd63db0061cc6525fa2ac778e68 412 Gene3D G3DSA:2.40.110.10 140 245 1.7E-34 T 28-03-2018 CJD35_RS06855 e9c20cd63db0061cc6525fa2ac778e68 412 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 401 2.0E-34 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS06855 e9c20cd63db0061cc6525fa2ac778e68 412 Gene3D G3DSA:1.10.540.10 1 139 4.2E-26 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS06855 e9c20cd63db0061cc6525fa2ac778e68 412 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 139 234 4.4E-20 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS06855 e9c20cd63db0061cc6525fa2ac778e68 412 SUPERFAMILY SSF47203 250 406 2.58E-40 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 Gene3D G3DSA:3.30.70.870 301 404 8.8E-30 T 28-03-2018 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 Gene3D G3DSA:3.30.70.240 405 482 5.6E-14 T 28-03-2018 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 598 2.4E-278 T 28-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 SUPERFAMILY SSF50447 149 296 2.08E-27 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 SUPERFAMILY SSF52540 3 204 1.57E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.3E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 PRINTS PR00315 GTP-binding elongation factor signature 69 79 4.3E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 PRINTS PR00315 GTP-binding elongation factor signature 121 130 4.3E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 PRINTS PR00315 GTP-binding elongation factor signature 5 18 4.3E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 PRINTS PR00315 GTP-binding elongation factor signature 85 96 4.3E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 Pfam PF00679 Elongation factor G C-terminus 397 477 8.8E-19 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 Pfam PF00009 Elongation factor Tu GTP binding domain 3 193 3.4E-54 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 Gene3D G3DSA:3.40.50.300 1 65 7.2E-10 T 28-03-2018 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 Gene3D G3DSA:2.40.30.10 186 299 8.6E-18 T 28-03-2018 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 Gene3D G3DSA:2.40.50.250 483 572 2.0E-34 T 28-03-2018 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 SUPERFAMILY SSF54980 301 386 1.19E-13 T 28-03-2018 IPR035647 EF-G domain III/V-like CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 Pfam PF03144 Elongation factor Tu domain 2 217 286 1.0E-7 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 SUPERFAMILY SSF54980 398 510 4.75E-23 T 28-03-2018 IPR035647 EF-G domain III/V-like CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 Gene3D G3DSA:3.40.50.300 66 185 6.2E-29 T 28-03-2018 CJD35_RS02305 de3a2ae3af5a71334048bbcb5ecd265a 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 140 3.0E-22 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CJD35_RS09125 b97c0eab1b98fb803bab3bf888b64838 89 Gene3D G3DSA:1.20.120.20 17 88 0.0012 T 28-03-2018 CJD35_RS14565 a52cc916b05f086d552fb7fbb68e858f 366 Gene3D G3DSA:3.40.640.10 14 249 1.0E-34 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS14565 a52cc916b05f086d552fb7fbb68e858f 366 SUPERFAMILY SSF53383 5 356 3.74E-66 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS14565 a52cc916b05f086d552fb7fbb68e858f 366 Gene3D G3DSA:3.90.1150.10 252 366 1.6E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS14565 a52cc916b05f086d552fb7fbb68e858f 366 PIRSF PIRSF005572 3 366 1.9E-88 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CJD35_RS14565 a52cc916b05f086d552fb7fbb68e858f 366 Pfam PF00266 Aminotransferase class-V 7 353 1.4E-38 T 28-03-2018 IPR000192 Aminotransferase class V domain CJD35_RS10560 92abb9b62523a45b3e911a6c26ef5b0f 342 Gene3D G3DSA:1.10.600.10 10 342 1.4E-95 T 28-03-2018 IPR008949 Isoprenoid synthase domain CJD35_RS10560 92abb9b62523a45b3e911a6c26ef5b0f 342 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 99 113 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site CJD35_RS10560 92abb9b62523a45b3e911a6c26ef5b0f 342 SUPERFAMILY SSF48576 20 340 5.76E-92 T 28-03-2018 IPR008949 Isoprenoid synthase domain CJD35_RS10560 92abb9b62523a45b3e911a6c26ef5b0f 342 Pfam PF00348 Polyprenyl synthetase 50 288 3.9E-67 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CJD35_RS06745 41412b5639f0cdc8654f426d0f3e8cfd 179 Pfam PF05838 Glycosyl hydrolase 108 8 90 1.7E-25 T 28-03-2018 IPR008565 Protein of unknown function DUF847 CJD35_RS06745 41412b5639f0cdc8654f426d0f3e8cfd 179 Gene3D G3DSA:1.20.141.10 1 179 4.1E-43 T 28-03-2018 CJD35_RS06745 41412b5639f0cdc8654f426d0f3e8cfd 179 SUPERFAMILY SSF53955 4 177 1.77E-42 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS06745 41412b5639f0cdc8654f426d0f3e8cfd 179 Pfam PF09374 Predicted Peptidoglycan domain 97 177 9.6E-16 T 28-03-2018 IPR018537 Peptidoglycan binding domain CJD35_RS09665 cd349e322ad6f38c372578d6594c7c33 290 PIRSF PIRSF000388 16 289 6.4E-102 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CJD35_RS09665 cd349e322ad6f38c372578d6594c7c33 290 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 37 286 2.2E-90 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CJD35_RS09665 cd349e322ad6f38c372578d6594c7c33 290 Gene3D G3DSA:3.20.20.60 9 286 8.0E-80 T 28-03-2018 CJD35_RS09665 cd349e322ad6f38c372578d6594c7c33 290 SUPERFAMILY SSF51621 25 286 3.18E-94 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJD35_RS09665 cd349e322ad6f38c372578d6594c7c33 290 Pfam PF02548 Ketopantoate hydroxymethyltransferase 24 281 3.7E-103 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CJD35_RS09665 cd349e322ad6f38c372578d6594c7c33 290 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 24 286 39.972 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CJD35_RS00895 fbd6f9a12a65bd64f6d1ac625ac7390f 600 SUPERFAMILY SSF51735 413 537 5.6E-24 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS00895 fbd6f9a12a65bd64f6d1ac625ac7390f 600 Pfam PF02254 TrkA-N domain 414 526 9.7E-17 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CJD35_RS00895 fbd6f9a12a65bd64f6d1ac625ac7390f 600 Gene3D G3DSA:3.40.50.720 410 572 6.1E-17 T 28-03-2018 CJD35_RS00895 fbd6f9a12a65bd64f6d1ac625ac7390f 600 Gene3D G3DSA:1.20.91.10 240 326 2.0E-11 T 28-03-2018 CJD35_RS00895 fbd6f9a12a65bd64f6d1ac625ac7390f 600 Pfam PF00999 Sodium/hydrogen exchanger family 19 385 7.3E-64 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CJD35_RS00410 bcc57d57719f8355e76f33cb7c9ae359 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 1.3E-14 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS00410 bcc57d57719f8355e76f33cb7c9ae359 216 Gene3D G3DSA:3.40.30.10 1 92 2.0E-19 T 28-03-2018 CJD35_RS00410 bcc57d57719f8355e76f33cb7c9ae359 216 Pfam PF14497 Glutathione S-transferase, C-terminal domain 118 201 2.4E-10 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CJD35_RS00410 bcc57d57719f8355e76f33cb7c9ae359 216 Gene3D G3DSA:1.20.1050.10 93 210 3.4E-22 T 28-03-2018 CJD35_RS00410 bcc57d57719f8355e76f33cb7c9ae359 216 SUPERFAMILY SSF47616 74 202 3.62E-24 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS00410 bcc57d57719f8355e76f33cb7c9ae359 216 SUPERFAMILY SSF52833 1 86 5.04E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS10020 4cec8b27ab8fafc3598bb72fcdf0838b 161 Pfam PF06676 Protein of unknown function (DUF1178) 2 153 1.7E-47 T 28-03-2018 IPR009562 Protein of unknown function DUF1178 CJD35_RS10020 4cec8b27ab8fafc3598bb72fcdf0838b 161 PIRSF PIRSF032131 1 161 2.5E-39 T 28-03-2018 IPR009562 Protein of unknown function DUF1178 CJD35_RS07720 cd35b5ac8cef99c0446c420a27eee97e 549 SUPERFAMILY SSF142984 316 397 3.27E-19 T 28-03-2018 CJD35_RS07720 cd35b5ac8cef99c0446c420a27eee97e 549 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 415 426 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS07720 cd35b5ac8cef99c0446c420a27eee97e 549 SUPERFAMILY SSF142019 83 313 3.27E-81 T 28-03-2018 CJD35_RS07720 cd35b5ac8cef99c0446c420a27eee97e 549 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 240 255 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS07720 cd35b5ac8cef99c0446c420a27eee97e 549 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 499 540 2.3E-10 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS07720 cd35b5ac8cef99c0446c420a27eee97e 549 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 404 441 3.4E-14 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS07720 cd35b5ac8cef99c0446c420a27eee97e 549 SMART SM00928 402 447 1.0E-15 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS07720 cd35b5ac8cef99c0446c420a27eee97e 549 SUPERFAMILY SSF140490 398 441 4.18E-14 T 28-03-2018 CJD35_RS07720 cd35b5ac8cef99c0446c420a27eee97e 549 SUPERFAMILY SSF140490 500 538 1.57E-8 T 28-03-2018 CJD35_RS07720 cd35b5ac8cef99c0446c420a27eee97e 549 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 131 292 1.9E-46 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS00220 b3f149314a7ccf32cb5f962f1e2f8867 177 Pfam PF01625 Peptide methionine sulfoxide reductase 6 156 4.5E-61 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS00220 b3f149314a7ccf32cb5f962f1e2f8867 177 Gene3D G3DSA:3.30.1060.10 2 173 1.1E-68 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS00220 b3f149314a7ccf32cb5f962f1e2f8867 177 SUPERFAMILY SSF55068 3 168 3.92E-71 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS00220 b3f149314a7ccf32cb5f962f1e2f8867 177 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 160 34.132 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS00220 b3f149314a7ccf32cb5f962f1e2f8867 177 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 148 2.9E-59 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS17005 c4826df9d82e07f6a1fd9583b8b56ac1 414 Gene3D G3DSA:1.20.1250.20 8 215 1.4E-24 T 28-03-2018 CJD35_RS17005 c4826df9d82e07f6a1fd9583b8b56ac1 414 Gene3D G3DSA:1.20.1250.20 216 410 2.0E-22 T 28-03-2018 CJD35_RS17005 c4826df9d82e07f6a1fd9583b8b56ac1 414 SUPERFAMILY SSF103473 15 405 4.19E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS17005 c4826df9d82e07f6a1fd9583b8b56ac1 414 Pfam PF07690 Major Facilitator Superfamily 39 364 1.3E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS02365 9fc225e673b4024ae68b4f1e3e77e6d7 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.2E-22 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS02365 9fc225e673b4024ae68b4f1e3e77e6d7 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 14.984 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS02365 9fc225e673b4024ae68b4f1e3e77e6d7 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 25 4.0E-7 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS02365 9fc225e673b4024ae68b4f1e3e77e6d7 44 Pfam PF00468 Ribosomal protein L34 1 44 1.3E-22 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS06985 a104be8ad36adb32f29f59e7d8e50504 426 Pfam PF00924 Mechanosensitive ion channel 201 401 1.2E-46 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CJD35_RS06985 a104be8ad36adb32f29f59e7d8e50504 426 Gene3D G3DSA:3.30.70.100 311 406 3.4E-20 T 28-03-2018 CJD35_RS06985 a104be8ad36adb32f29f59e7d8e50504 426 Gene3D G3DSA:2.30.30.60 261 310 1.6E-10 T 28-03-2018 CJD35_RS06985 a104be8ad36adb32f29f59e7d8e50504 426 SUPERFAMILY SSF50182 244 309 5.89E-15 T 28-03-2018 IPR010920 LSM domain CJD35_RS06985 a104be8ad36adb32f29f59e7d8e50504 426 SUPERFAMILY SSF82861 158 242 1.83E-11 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CJD35_RS06985 a104be8ad36adb32f29f59e7d8e50504 426 SUPERFAMILY SSF82689 311 409 3.01E-26 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CJD35_RS07245 05cc9c4f518c242916851fd72a68ecee 117 Pfam PF01541 GIY-YIG catalytic domain 26 98 6.1E-9 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS07245 05cc9c4f518c242916851fd72a68ecee 117 SUPERFAMILY SSF82771 27 112 2.35E-16 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS07245 05cc9c4f518c242916851fd72a68ecee 117 Gene3D G3DSA:3.40.1440.10 25 115 3.9E-14 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS01735 3b1b1d7ff63bab6b176fba1da7fc04c1 256 SUPERFAMILY SSF74653 169 249 6.67E-23 T 28-03-2018 CJD35_RS01735 3b1b1d7ff63bab6b176fba1da7fc04c1 256 Gene3D G3DSA:3.30.1150.10 96 256 4.2E-21 T 28-03-2018 CJD35_RS01735 3b1b1d7ff63bab6b176fba1da7fc04c1 256 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 174 251 1.1E-22 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CJD35_RS01735 3b1b1d7ff63bab6b176fba1da7fc04c1 256 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 175 250 2.4E-18 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CJD35_RS22190 f3c3d2ddd233bfb4685ac7036650eeef 318 Gene3D G3DSA:1.10.443.10 130 312 5.5E-31 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS22190 f3c3d2ddd233bfb4685ac7036650eeef 318 SUPERFAMILY SSF56349 27 307 2.06E-40 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS22190 f3c3d2ddd233bfb4685ac7036650eeef 318 Pfam PF00589 Phage integrase family 130 304 3.1E-19 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS22190 f3c3d2ddd233bfb4685ac7036650eeef 318 Gene3D G3DSA:1.10.150.130 23 129 1.2E-19 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS22190 f3c3d2ddd233bfb4685ac7036650eeef 318 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 38 103 3.1E-9 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS04150 f68f023cc992494d96e34aec95ac6f03 422 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 29 405 3.6E-111 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS04150 f68f023cc992494d96e34aec95ac6f03 422 Gene3D G3DSA:3.20.20.70 43 420 4.1E-43 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS04150 f68f023cc992494d96e34aec95ac6f03 422 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 31 404 70.787 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS04150 f68f023cc992494d96e34aec95ac6f03 422 SUPERFAMILY SSF102114 130 176 7.19E-13 T 28-03-2018 CJD35_RS04150 f68f023cc992494d96e34aec95ac6f03 422 SUPERFAMILY SSF102114 208 359 7.19E-13 T 28-03-2018 CJD35_RS04150 f68f023cc992494d96e34aec95ac6f03 422 PIRSF PIRSF006004 25 417 2.8E-133 T 28-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS04150 f68f023cc992494d96e34aec95ac6f03 422 Pfam PF04055 Radical SAM superfamily 139 333 6.3E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 51 287 1.9E-31 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 PRINTS PR00046 Major sigma-70 factor signature 104 112 3.2E-22 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 PRINTS PR00046 Major sigma-70 factor signature 257 272 3.2E-22 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 PRINTS PR00046 Major sigma-70 factor signature 272 283 3.2E-22 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 PRINTS PR00046 Major sigma-70 factor signature 238 250 3.2E-22 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 PRINTS PR00046 Major sigma-70 factor signature 80 93 3.2E-22 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 257 283 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 80 93 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 SUPERFAMILY SSF88946 17 124 5.34E-39 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 Gene3D G3DSA:1.10.10.10 228 297 1.3E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 18 288 5.0E-109 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 Pfam PF04542 Sigma-70 region 2 56 124 8.2E-15 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 Gene3D G3DSA:1.10.601.10 11 123 1.8E-39 T 28-03-2018 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 Pfam PF04545 Sigma-70, region 4 234 285 1.4E-16 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 Pfam PF00140 Sigma-70 factor, region 1.2 18 47 5.3E-10 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 SUPERFAMILY SSF88659 194 288 4.11E-21 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 PIRSF PIRSF000770 11 299 3.0E-41 T 28-03-2018 CJD35_RS00680 df71811a09c338727fabb32d4506e48f 304 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 1 289 51.411 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CJD35_RS07750 27c16848a7ab48e9a48bdf26301f569b 331 Gene3D G3DSA:1.10.3470.10 1 330 2.0E-67 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CJD35_RS07750 27c16848a7ab48e9a48bdf26301f569b 331 Pfam PF01032 FecCD transport family 17 326 6.5E-81 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CJD35_RS07750 27c16848a7ab48e9a48bdf26301f569b 331 SUPERFAMILY SSF81345 3 326 5.62E-72 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CJD35_RS00630 5026cbb4bfddc61e309af6e8c4959b83 142 Pfam PF05443 ROS/MUCR transcriptional regulator protein 11 131 2.1E-51 T 28-03-2018 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 CJD35_RS09485 f21d2beb95746f33a0e6bd0d6468f165 461 SUPERFAMILY SSF54534 214 312 7.85E-24 T 28-03-2018 CJD35_RS09485 f21d2beb95746f33a0e6bd0d6468f165 461 SUPERFAMILY SSF54534 324 420 4.71E-7 T 28-03-2018 CJD35_RS09485 f21d2beb95746f33a0e6bd0d6468f165 461 Gene3D G3DSA:1.10.4030.10 65 190 1.8E-20 T 28-03-2018 CJD35_RS09485 f21d2beb95746f33a0e6bd0d6468f165 461 Pfam PF00639 PPIC-type PPIASE domain 224 309 1.1E-18 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CJD35_RS09485 f21d2beb95746f33a0e6bd0d6468f165 461 SUPERFAMILY SSF109998 70 242 1.63E-33 T 28-03-2018 IPR027304 Trigger factor/SurA domain CJD35_RS09485 f21d2beb95746f33a0e6bd0d6468f165 461 Pfam PF09312 SurA N-terminal domain 70 183 2.5E-15 T 28-03-2018 IPR015391 SurA N-terminal CJD35_RS09485 f21d2beb95746f33a0e6bd0d6468f165 461 Gene3D G3DSA:3.10.50.40 337 446 2.3E-5 T 28-03-2018 CJD35_RS09485 f21d2beb95746f33a0e6bd0d6468f165 461 Gene3D G3DSA:3.10.50.40 204 336 1.9E-24 T 28-03-2018 CJD35_RS10360 cf2cf2466f5f7b79f1aa264a9d47acc8 83 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 81 21.47 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CJD35_RS10360 cf2cf2466f5f7b79f1aa264a9d47acc8 83 Pfam PF02416 mttA/Hcf106 family 5 57 1.2E-8 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CJD35_RS10360 cf2cf2466f5f7b79f1aa264a9d47acc8 83 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 6.0E-18 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CJD35_RS14145 90888157ff40eb808836cae020ff11a6 212 Pfam PF00484 Carbonic anhydrase 38 199 1.7E-46 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS14145 90888157ff40eb808836cae020ff11a6 212 SUPERFAMILY SSF53056 3 210 2.22E-61 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS14145 90888157ff40eb808836cae020ff11a6 212 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 87 107 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS14145 90888157ff40eb808836cae020ff11a6 212 Gene3D G3DSA:3.40.1050.10 1 211 2.5E-60 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS14145 90888157ff40eb808836cae020ff11a6 212 SMART SM00947 30 203 1.9E-61 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS14145 90888157ff40eb808836cae020ff11a6 212 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS16825 3723ec1e3134a763530649eb47df124a 151 SUPERFAMILY SSF48076 10 138 3.4E-51 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit CJD35_RS16825 3723ec1e3134a763530649eb47df124a 151 TIGRFAM TIGR02792 PCA_ligA: protocatechuate 4,5-dioxygenase, alpha subunit 18 134 1.2E-56 T 28-03-2018 IPR014159 Protocatechuate 4,5-dioxygenase, alpha subunit KEGG: 00362+1.13.11.8|KEGG: 00624+1.13.11.8|KEGG: 00627+1.13.11.8|MetaCyc: PWY-6216|MetaCyc: PWY-6217 CJD35_RS16825 3723ec1e3134a763530649eb47df124a 151 Gene3D G3DSA:1.10.700.10 15 128 1.2E-46 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit CJD35_RS16825 3723ec1e3134a763530649eb47df124a 151 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 38 123 1.0E-33 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit CJD35_RS06515 ec4822b2efd62016c34bdd00542fa9c2 361 Pfam PF07836 DmpG-like communication domain 279 340 3.2E-27 T 28-03-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CJD35_RS06515 ec4822b2efd62016c34bdd00542fa9c2 361 ProDom PD005364 ALDOLASE 4-HYDROXY-2-OXOVALERATE LYASE PYRUVATE 4.1.3.- PLASMID HMG-COA LYASE-LIKE TRANSFERASE HOA 280 342 1.0E-21 T 28-03-2018 IPR012425 DmpG-like communication GO:0016833|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CJD35_RS06515 ec4822b2efd62016c34bdd00542fa9c2 361 SUPERFAMILY SSF51569 10 272 7.87E-65 T 28-03-2018 CJD35_RS06515 ec4822b2efd62016c34bdd00542fa9c2 361 TIGRFAM TIGR03217 4OH_2_O_val_ald: 4-hydroxy-2-oxovalerate aldolase 10 343 7.8E-160 T 28-03-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CJD35_RS06515 ec4822b2efd62016c34bdd00542fa9c2 361 SUPERFAMILY SSF89000 294 343 1.37E-14 T 28-03-2018 CJD35_RS06515 ec4822b2efd62016c34bdd00542fa9c2 361 Hamap MF_01656 4-hydroxy-2-oxovalerate aldolase [mhpE]. 1 348 191.867 T 28-03-2018 IPR017629 4-hydroxy-2-oxovalerate aldolase GO:0008701|GO:0019439 KEGG: 00360+4.1.3.39|KEGG: 00362+4.1.3.39|KEGG: 00621+4.1.3.39|KEGG: 00622+4.1.3.39|MetaCyc: PWY-5162 CJD35_RS06515 ec4822b2efd62016c34bdd00542fa9c2 361 Gene3D G3DSA:1.10.8.60 282 343 6.2E-28 T 28-03-2018 CJD35_RS06515 ec4822b2efd62016c34bdd00542fa9c2 361 Pfam PF00682 HMGL-like 11 268 5.4E-54 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CJD35_RS06515 ec4822b2efd62016c34bdd00542fa9c2 361 Gene3D G3DSA:3.20.20.70 8 281 1.3E-53 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS20210 f4929eeee9ea84a10ab30b2a5dd4c70c 403 Gene3D G3DSA:1.10.10.60 250 333 0.023 T 28-03-2018 CJD35_RS20210 f4929eeee9ea84a10ab30b2a5dd4c70c 403 Gene3D G3DSA:1.10.10.60 126 219 0.22 T 28-03-2018 CJD35_RS20210 f4929eeee9ea84a10ab30b2a5dd4c70c 403 Gene3D G3DSA:1.10.10.60 236 249 0.16 T 28-03-2018 CJD35_RS08495 5ed5dc6df68dd0f4dfc6379589ee00d8 234 SUPERFAMILY SSF53335 18 218 2.24E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS08495 5ed5dc6df68dd0f4dfc6379589ee00d8 234 PIRSF PIRSF005461 9 227 3.8E-68 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CJD35_RS08495 5ed5dc6df68dd0f4dfc6379589ee00d8 234 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 26 217 27.498 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CJD35_RS08495 5ed5dc6df68dd0f4dfc6379589ee00d8 234 Pfam PF01728 FtsJ-like methyltransferase 42 216 3.0E-50 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CJD35_RS08495 5ed5dc6df68dd0f4dfc6379589ee00d8 234 Gene3D G3DSA:3.40.50.150 7 227 6.1E-54 T 28-03-2018 CJD35_RS17195 731b6cef4676ab7b7e061ff754fcc877 462 SUPERFAMILY SSF54368 11 118 3.53E-16 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJD35_RS17195 731b6cef4676ab7b7e061ff754fcc877 462 SUPERFAMILY SSF55931 120 460 2.65E-98 T 28-03-2018 CJD35_RS17195 731b6cef4676ab7b7e061ff754fcc877 462 Gene3D G3DSA:3.10.20.70 8 119 9.0E-19 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJD35_RS17195 731b6cef4676ab7b7e061ff754fcc877 462 Pfam PF00120 Glutamine synthetase, catalytic domain 121 458 9.6E-100 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJD35_RS17195 731b6cef4676ab7b7e061ff754fcc877 462 Gene3D G3DSA:3.30.590.10 120 462 2.7E-91 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CJD35_RS17195 731b6cef4676ab7b7e061ff754fcc877 462 SMART SM01230 120 377 3.5E-89 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CJD35_RS11880 37169259952193cb4ebf5df3102b011c 297 SUPERFAMILY SSF46785 4 114 3.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS11880 37169259952193cb4ebf5df3102b011c 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.4E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS11880 37169259952193cb4ebf5df3102b011c 297 Pfam PF03466 LysR substrate binding domain 91 294 1.1E-45 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS11880 37169259952193cb4ebf5df3102b011c 297 Gene3D G3DSA:3.40.190.10 88 178 6.1E-20 T 28-03-2018 CJD35_RS11880 37169259952193cb4ebf5df3102b011c 297 Gene3D G3DSA:1.10.10.10 4 86 2.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS11880 37169259952193cb4ebf5df3102b011c 297 Gene3D G3DSA:3.40.190.10 179 266 1.4E-25 T 28-03-2018 CJD35_RS11880 37169259952193cb4ebf5df3102b011c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 8.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS11880 37169259952193cb4ebf5df3102b011c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 8.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS11880 37169259952193cb4ebf5df3102b011c 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 8.8E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS11880 37169259952193cb4ebf5df3102b011c 297 SUPERFAMILY SSF53850 91 295 3.98E-47 T 28-03-2018 CJD35_RS01685 9f3351352e42cac6dc7ad98ebe45c2d6 600 SUPERFAMILY SSF52016 384 582 3.53E-45 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJD35_RS01685 9f3351352e42cac6dc7ad98ebe45c2d6 600 Pfam PF00920 Dehydratase family 47 578 4.5E-154 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CJD35_RS01685 9f3351352e42cac6dc7ad98ebe45c2d6 600 SUPERFAMILY SSF143975 8 381 1.19E-117 T 28-03-2018 CJD35_RS01685 9f3351352e42cac6dc7ad98ebe45c2d6 600 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 130 140 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 629 696 2.5E-10 T 28-03-2018 IPR001357 BRCT domain CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 SUPERFAMILY SSF52113 627 700 3.11E-17 T 28-03-2018 IPR001357 BRCT domain CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 SMART SM00292 625 702 1.1E-10 T 28-03-2018 IPR001357 BRCT domain CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Gene3D G3DSA:3.40.50.10190 606 703 1.2E-21 T 28-03-2018 IPR001357 BRCT domain CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 PIRSF PIRSF001604 4 703 4.9E-219 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 419 446 2.7E-12 T 28-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 SUPERFAMILY SSF56091 8 330 3.7E-108 T 28-03-2018 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 11 332 1.3E-115 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 SMART SM00532 11 460 4.3E-243 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Gene3D G3DSA:2.40.50.140 331 403 4.7E-34 T 28-03-2018 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 125 154 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Pfam PF12826 Helix-hairpin-helix motif 524 560 7.6E-8 T 28-03-2018 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Gene3D G3DSA:1.10.287.610 3 75 1.8E-23 T 28-03-2018 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 345 360 - T 28-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Gene3D G3DSA:3.30.470.30 129 266 2.0E-49 T 28-03-2018 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Gene3D G3DSA:1.10.150.20 521 605 1.0E-23 T 28-03-2018 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Hamap MF_01588 DNA ligase [ligA]. 10 699 48.587 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Gene3D G3DSA:1.10.150.20 444 519 3.9E-25 T 28-03-2018 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 SUPERFAMILY SSF50249 332 412 4.8E-25 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 SUPERFAMILY SSF47781 418 611 4.0E-45 T 28-03-2018 IPR010994 RuvA domain 2-like CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 19 695 6.0E-226 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CJD35_RS01195 b84ea5445f0f61426a184f98e89b24ee 703 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 335 411 1.3E-31 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CJD35_RS02075 0e79772d4c934392f2317cc508e769d9 92 Pfam PF09981 Uncharacterized protein conserved in bacteria (DUF2218) 4 92 8.3E-34 T 28-03-2018 IPR014543 Uncharacterised conserved protein UCP028291 CJD35_RS02075 0e79772d4c934392f2317cc508e769d9 92 PIRSF PIRSF028291 1 92 1.5E-31 T 28-03-2018 IPR014543 Uncharacterised conserved protein UCP028291 CJD35_RS15365 4ee51cae7037b3e3e67f1ec6fa98680b 209 Gene3D G3DSA:1.10.357.10 79 209 1.3E-11 T 28-03-2018 CJD35_RS15365 4ee51cae7037b3e3e67f1ec6fa98680b 209 SUPERFAMILY SSF46689 18 83 9.23E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS15365 4ee51cae7037b3e3e67f1ec6fa98680b 209 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 85 204 9.2E-7 T 28-03-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 CJD35_RS15365 4ee51cae7037b3e3e67f1ec6fa98680b 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 74 2.2E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS15365 4ee51cae7037b3e3e67f1ec6fa98680b 209 SUPERFAMILY SSF48498 91 188 7.12E-9 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS15365 4ee51cae7037b3e3e67f1ec6fa98680b 209 Gene3D G3DSA:1.10.10.60 1 78 4.7E-16 T 28-03-2018 CJD35_RS11885 0f791ebfbe86c9338583091064e22b3b 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 221 2.5E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS11885 0f791ebfbe86c9338583091064e22b3b 235 Pfam PF00072 Response regulator receiver domain 3 112 1.0E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS11885 0f791ebfbe86c9338583091064e22b3b 235 SMART SM00448 1 112 4.8E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS11885 0f791ebfbe86c9338583091064e22b3b 235 Gene3D G3DSA:3.40.50.2300 1 116 3.2E-33 T 28-03-2018 CJD35_RS11885 0f791ebfbe86c9338583091064e22b3b 235 SMART SM00862 145 221 5.7E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS11885 0f791ebfbe86c9338583091064e22b3b 235 SUPERFAMILY SSF52172 1 174 1.85E-38 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS11885 0f791ebfbe86c9338583091064e22b3b 235 Gene3D G3DSA:1.10.10.10 117 228 4.6E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS13800 8c7bc1840af21e3eb526b13de95d01d2 127 Pfam PF02152 Dihydroneopterin aldolase 12 121 8.6E-17 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CJD35_RS13800 8c7bc1840af21e3eb526b13de95d01d2 127 Gene3D G3DSA:3.30.1130.10 6 127 3.5E-18 T 28-03-2018 CJD35_RS13800 8c7bc1840af21e3eb526b13de95d01d2 127 SUPERFAMILY SSF55620 11 125 1.0E-15 T 28-03-2018 CJD35_RS13800 8c7bc1840af21e3eb526b13de95d01d2 127 TIGRFAM TIGR00526 folB_dom: FolB domain 11 126 2.7E-13 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CJD35_RS13800 8c7bc1840af21e3eb526b13de95d01d2 127 SMART SM00905 11 124 3.6E-15 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CJD35_RS19110 c70741c61ff7c99d84536ca39ea984cb 316 Gene3D G3DSA:1.20.1510.10 24 243 1.7E-48 T 28-03-2018 CJD35_RS19110 c70741c61ff7c99d84536ca39ea984cb 316 Pfam PF01545 Cation efflux family 31 243 3.4E-33 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJD35_RS19110 c70741c61ff7c99d84536ca39ea984cb 316 SUPERFAMILY SSF161111 22 244 7.72E-47 T 28-03-2018 CJD35_RS19110 c70741c61ff7c99d84536ca39ea984cb 316 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 25 314 1.5E-64 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJD35_RS20290 c70741c61ff7c99d84536ca39ea984cb 316 Gene3D G3DSA:1.20.1510.10 24 243 1.7E-48 T 28-03-2018 CJD35_RS20290 c70741c61ff7c99d84536ca39ea984cb 316 Pfam PF01545 Cation efflux family 31 243 3.4E-33 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJD35_RS20290 c70741c61ff7c99d84536ca39ea984cb 316 SUPERFAMILY SSF161111 22 244 7.72E-47 T 28-03-2018 CJD35_RS20290 c70741c61ff7c99d84536ca39ea984cb 316 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 25 314 1.5E-64 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJD35_RS01740 5fd340c03b451e886edac5c158dd3842 765 Pfam PF00593 TonB dependent receptor 252 764 1.0E-45 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS01740 5fd340c03b451e886edac5c158dd3842 765 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 163 2.1E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS01740 5fd340c03b451e886edac5c158dd3842 765 SUPERFAMILY SSF56935 29 764 1.83E-120 T 28-03-2018 CJD35_RS01740 5fd340c03b451e886edac5c158dd3842 765 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 764 2.3E-72 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CJD35_RS01740 5fd340c03b451e886edac5c158dd3842 765 Gene3D G3DSA:2.170.130.10 26 175 3.3E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS01740 5fd340c03b451e886edac5c158dd3842 765 Gene3D G3DSA:2.40.170.20 177 764 3.0E-72 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS11760 7db54a765f35e3f0626f76a1135bd2f3 375 Gene3D G3DSA:3.90.550.10 28 295 3.4E-28 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS11760 7db54a765f35e3f0626f76a1135bd2f3 375 SUPERFAMILY SSF53448 34 274 6.88E-28 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS11760 7db54a765f35e3f0626f76a1135bd2f3 375 Pfam PF00535 Glycosyl transferase family 2 48 209 2.1E-17 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS02225 0774200a52ed0d55f905c9963109e402 75 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 14 49 1.3E-4 T 28-03-2018 IPR018691 Protein of unknown function DUF2188 CJD35_RS12270 98429ccd51bfe15aa66f36c8c6ae0d3a 758 Gene3D G3DSA:3.40.50.300 9 155 2.6E-27 T 28-03-2018 CJD35_RS12270 98429ccd51bfe15aa66f36c8c6ae0d3a 758 Gene3D G3DSA:3.40.50.300 174 291 5.5E-36 T 28-03-2018 CJD35_RS12270 98429ccd51bfe15aa66f36c8c6ae0d3a 758 Gene3D G3DSA:3.40.50.300 395 657 1.2E-51 T 28-03-2018 CJD35_RS12270 98429ccd51bfe15aa66f36c8c6ae0d3a 758 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 282 7.3E-73 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CJD35_RS12270 98429ccd51bfe15aa66f36c8c6ae0d3a 758 SUPERFAMILY SSF52540 11 644 2.76E-174 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12270 98429ccd51bfe15aa66f36c8c6ae0d3a 758 Gene3D G3DSA:3.40.50.300 292 394 1.2E-21 T 28-03-2018 CJD35_RS12270 98429ccd51bfe15aa66f36c8c6ae0d3a 758 Pfam PF13361 UvrD-like helicase C-terminal domain 287 614 4.7E-61 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CJD35_RS03665 3bc41bad2d79ac623ffc13f574ed0d4d 363 Gene3D G3DSA:3.30.470.10 3 180 2.7E-64 T 28-03-2018 CJD35_RS03665 3bc41bad2d79ac623ffc13f574ed0d4d 363 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 51 361 1.1E-119 T 28-03-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 CJD35_RS03665 3bc41bad2d79ac623ffc13f574ed0d4d 363 SUPERFAMILY SSF56752 8 360 1.7E-110 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CJD35_RS03665 3bc41bad2d79ac623ffc13f574ed0d4d 363 ProSitePatterns PS00770 Aminotransferases class-IV signature. 239 269 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CJD35_RS03665 3bc41bad2d79ac623ffc13f574ed0d4d 363 Gene3D G3DSA:3.20.10.10 181 359 7.8E-50 T 28-03-2018 CJD35_RS03665 3bc41bad2d79ac623ffc13f574ed0d4d 363 PIRSF PIRSF006468 5 363 1.2E-126 T 28-03-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 CJD35_RS03665 3bc41bad2d79ac623ffc13f574ed0d4d 363 Pfam PF01063 Amino-transferase class IV 77 317 2.1E-32 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CJD35_RS18840 b0bab1aa20866d0d945c86e1248b1e25 755 Gene3D G3DSA:2.170.130.10 21 155 1.9E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS18840 b0bab1aa20866d0d945c86e1248b1e25 755 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 149 4.5E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS18840 b0bab1aa20866d0d945c86e1248b1e25 755 SUPERFAMILY SSF56935 404 755 1.45E-97 T 28-03-2018 CJD35_RS18840 b0bab1aa20866d0d945c86e1248b1e25 755 SUPERFAMILY SSF56935 24 377 1.45E-97 T 28-03-2018 CJD35_RS18840 b0bab1aa20866d0d945c86e1248b1e25 755 Pfam PF00593 TonB dependent receptor 254 753 1.4E-36 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS18840 b0bab1aa20866d0d945c86e1248b1e25 755 Gene3D G3DSA:2.40.170.20 158 754 8.0E-63 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS18675 c345704ded6d7345b0f7af22b91efd28 49 Gene3D G3DSA:1.10.1200.10 1 49 2.0E-16 T 28-03-2018 CJD35_RS18675 c345704ded6d7345b0f7af22b91efd28 49 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 46 6.1E-23 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CJD35_RS18675 c345704ded6d7345b0f7af22b91efd28 49 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3 18 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site CJD35_RS18675 c345704ded6d7345b0f7af22b91efd28 49 Pfam PF00550 Phosphopantetheine attachment site 2 44 3.3E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CJD35_RS18675 c345704ded6d7345b0f7af22b91efd28 49 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 6 45 2.0E-8 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CJD35_RS18675 c345704ded6d7345b0f7af22b91efd28 49 SUPERFAMILY SSF47336 2 46 1.83E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 Gene3D G3DSA:3.10.20.30 266 365 5.9E-46 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 71 86 4.7E-35 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 4.7E-35 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 4.7E-35 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 88 106 4.7E-35 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 SUPERFAMILY SSF81271 282 363 1.7E-35 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 4.8E-147 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 42.442 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 Pfam PF01926 50S ribosome-binding GTPase 4 122 2.5E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 SUPERFAMILY SSF52540 3 304 2.03E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 Gene3D G3DSA:1.10.150.300 111 202 1.5E-25 T 28-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 PIRSF PIRSF006641 1 366 7.6E-152 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 4.3E-40 T 28-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 CJD35_RS12600 866002f355970993be78ff8688c0d79d 366 Gene3D G3DSA:3.40.50.300 1 81 6.8E-11 T 28-03-2018 CJD35_RS05900 7580cfdd5a17983b90c76318dbc4871f 362 SUPERFAMILY SSF56672 8 240 1.78E-89 T 28-03-2018 CJD35_RS05900 7580cfdd5a17983b90c76318dbc4871f 362 Gene3D G3DSA:3.30.70.270 47 119 1.8E-26 T 28-03-2018 CJD35_RS05900 7580cfdd5a17983b90c76318dbc4871f 362 Gene3D G3DSA:3.30.70.270 120 176 8.6E-19 T 28-03-2018 CJD35_RS05900 7580cfdd5a17983b90c76318dbc4871f 362 Pfam PF11798 IMS family HHH motif 172 203 5.5E-7 T 28-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CJD35_RS05900 7580cfdd5a17983b90c76318dbc4871f 362 Gene3D G3DSA:1.10.150.20 177 248 8.3E-20 T 28-03-2018 CJD35_RS05900 7580cfdd5a17983b90c76318dbc4871f 362 Gene3D G3DSA:3.30.1490.100 249 362 1.1E-25 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CJD35_RS05900 7580cfdd5a17983b90c76318dbc4871f 362 Pfam PF11799 impB/mucB/samB family C-terminal domain 239 351 2.1E-20 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CJD35_RS05900 7580cfdd5a17983b90c76318dbc4871f 362 SUPERFAMILY SSF100879 245 345 2.16E-25 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CJD35_RS05900 7580cfdd5a17983b90c76318dbc4871f 362 Pfam PF00817 impB/mucB/samB family 14 160 2.3E-50 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CJD35_RS05900 7580cfdd5a17983b90c76318dbc4871f 362 Hamap MF_01113 DNA polymerase IV [dinB]. 8 360 38.644 T 28-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CJD35_RS00625 f9c74885be23b71f8e2be2747facf629 159 SUPERFAMILY SSF55729 25 154 7.65E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS00625 f9c74885be23b71f8e2be2747facf629 159 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 21 144 3.1E-26 T 28-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CJD35_RS00625 f9c74885be23b71f8e2be2747facf629 159 Pfam PF13673 Acetyltransferase (GNAT) domain 45 134 3.8E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS00625 f9c74885be23b71f8e2be2747facf629 159 Gene3D G3DSA:3.40.630.30 2 157 8.5E-27 T 28-03-2018 CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 SUPERFAMILY SSF52540 279 517 1.3E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 SUPERFAMILY SSF55781 74 155 1.33E-6 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 539 556 3.4E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 556 576 3.4E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 SUPERFAMILY SSF46689 486 576 8.96E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 Gene3D G3DSA:3.30.450.40 5 154 2.1E-6 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 Pfam PF01590 GAF domain 69 151 6.2E-6 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 Gene3D G3DSA:1.10.10.60 516 579 6.8E-19 T 28-03-2018 CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 SMART SM00382 295 439 2.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 299 312 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 Pfam PF00158 Sigma-54 interaction domain 278 440 2.7E-62 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 Pfam PF02954 Bacterial regulatory protein, Fis family 532 573 3.2E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 Gene3D G3DSA:3.40.50.300 268 447 5.0E-23 T 28-03-2018 CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 Gene3D G3DSA:1.10.8.60 449 515 3.4E-12 T 28-03-2018 CJD35_RS20645 cee4303e224fc67a2f08b8335e807979 584 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 362 377 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJD35_RS09415 bb17fbbbbb87f46674883b999da40baa 379 SUPERFAMILY SSF52833 2 150 3.1E-10 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS09415 bb17fbbbbb87f46674883b999da40baa 379 Gene3D G3DSA:3.40.30.10 1 151 1.6E-7 T 28-03-2018 CJD35_RS09415 bb17fbbbbb87f46674883b999da40baa 379 SMART SM00702 161 342 8.3E-7 T 28-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CJD35_RS09415 bb17fbbbbb87f46674883b999da40baa 379 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 255 341 4.4E-12 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CJD35_RS09415 bb17fbbbbb87f46674883b999da40baa 379 Gene3D G3DSA:2.60.120.620 160 349 6.6E-25 T 28-03-2018 CJD35_RS04025 337de6d966b0b945f504af78ce0e0105 210 Pfam PF13500 AAA domain 5 190 2.4E-50 T 28-03-2018 CJD35_RS04025 337de6d966b0b945f504af78ce0e0105 210 PIRSF PIRSF006755 1 207 7.0E-47 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CJD35_RS04025 337de6d966b0b945f504af78ce0e0105 210 SUPERFAMILY SSF52540 1 192 1.75E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04025 337de6d966b0b945f504af78ce0e0105 210 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 156 8.2E-34 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CJD35_RS04025 337de6d966b0b945f504af78ce0e0105 210 Gene3D G3DSA:3.40.50.300 2 197 2.2E-41 T 28-03-2018 CJD35_RS04025 337de6d966b0b945f504af78ce0e0105 210 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 193 25.423 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 Pfam PF00375 Sodium:dicarboxylate symporter family 10 415 9.4E-101 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 SUPERFAMILY SSF118215 9 417 3.92E-95 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 Gene3D G3DSA:1.10.3860.10 2 423 1.9E-102 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 PRINTS PR00173 Glutamate-aspartate symporter signature 54 74 3.1E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 PRINTS PR00173 Glutamate-aspartate symporter signature 161 183 3.1E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 3.1E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 PRINTS PR00173 Glutamate-aspartate symporter signature 243 262 3.1E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 PRINTS PR00173 Glutamate-aspartate symporter signature 84 109 3.1E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 PRINTS PR00173 Glutamate-aspartate symporter signature 208 227 3.1E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 PRINTS PR00173 Glutamate-aspartate symporter signature 344 363 3.1E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 3.1E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS14765 4efe7b540207febe514d3e0bd773a5c3 434 PRINTS PR00173 Glutamate-aspartate symporter signature 309 335 3.1E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS11065 6b672d2ddcdad7fdd7e56aec4113a6ca 317 SUPERFAMILY SSF53474 22 155 5.0E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS11065 6b672d2ddcdad7fdd7e56aec4113a6ca 317 SUPERFAMILY SSF53474 242 314 5.0E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS11065 6b672d2ddcdad7fdd7e56aec4113a6ca 317 Gene3D G3DSA:3.40.50.1820 19 315 3.0E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS11065 6b672d2ddcdad7fdd7e56aec4113a6ca 317 Pfam PF12146 Serine aminopeptidase, S33 43 298 1.3E-33 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 CJD35_RS09805 b5de213637fa3350351180e525a659dc 247 PIRSF PIRSF001430 1 247 7.1E-64 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS09805 b5de213637fa3350351180e525a659dc 247 Gene3D G3DSA:3.30.70.580 1 106 5.8E-24 T 28-03-2018 CJD35_RS09805 b5de213637fa3350351180e525a659dc 247 SUPERFAMILY SSF55120 1 246 2.59E-77 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS09805 b5de213637fa3350351180e525a659dc 247 Gene3D G3DSA:3.30.70.660 107 244 5.7E-34 T 28-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS09805 b5de213637fa3350351180e525a659dc 247 Pfam PF01416 tRNA pseudouridine synthase 144 246 3.0E-28 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS09805 b5de213637fa3350351180e525a659dc 247 Pfam PF01416 tRNA pseudouridine synthase 8 104 1.1E-6 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS09805 b5de213637fa3350351180e525a659dc 247 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 31.018 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS09805 b5de213637fa3350351180e525a659dc 247 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 239 1.2E-48 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS03675 7a0386a1af6d5324ee6e2a206a407af1 299 Pfam PF00892 EamA-like transporter family 163 293 8.4E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS03675 7a0386a1af6d5324ee6e2a206a407af1 299 Pfam PF00892 EamA-like transporter family 14 143 3.2E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS03675 7a0386a1af6d5324ee6e2a206a407af1 299 SUPERFAMILY SSF103481 197 296 3.4E-9 T 28-03-2018 CJD35_RS03675 7a0386a1af6d5324ee6e2a206a407af1 299 SUPERFAMILY SSF103481 43 145 1.26E-9 T 28-03-2018 CJD35_RS17175 8948c4172d722a62e0c24537daf6dd5d 334 Gene3D G3DSA:3.40.50.2300 179 334 2.4E-44 T 28-03-2018 CJD35_RS17175 8948c4172d722a62e0c24537daf6dd5d 334 Pfam PF13377 Periplasmic binding protein-like domain 178 333 2.1E-29 T 28-03-2018 CJD35_RS17175 8948c4172d722a62e0c24537daf6dd5d 334 Gene3D G3DSA:1.10.260.40 6 60 2.8E-18 T 28-03-2018 CJD35_RS17175 8948c4172d722a62e0c24537daf6dd5d 334 SUPERFAMILY SSF53822 63 321 5.8E-50 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CJD35_RS17175 8948c4172d722a62e0c24537daf6dd5d 334 SUPERFAMILY SSF47413 8 64 3.22E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS17175 8948c4172d722a62e0c24537daf6dd5d 334 Gene3D G3DSA:3.40.50.2300 61 178 3.6E-21 T 28-03-2018 CJD35_RS17175 8948c4172d722a62e0c24537daf6dd5d 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 53 1.3E-13 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS17175 8948c4172d722a62e0c24537daf6dd5d 334 SMART SM00354 6 76 1.9E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS02470 afc8180add4b26c0dad7aea057c411b1 595 Gene3D G3DSA:1.20.1560.10 15 338 9.3E-63 T 28-03-2018 CJD35_RS02470 afc8180add4b26c0dad7aea057c411b1 595 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS02470 afc8180add4b26c0dad7aea057c411b1 595 Pfam PF00005 ABC transporter 369 518 1.9E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS02470 afc8180add4b26c0dad7aea057c411b1 595 SMART SM00382 378 564 3.2E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS02470 afc8180add4b26c0dad7aea057c411b1 595 Gene3D G3DSA:3.40.50.300 344 593 6.2E-76 T 28-03-2018 CJD35_RS02470 afc8180add4b26c0dad7aea057c411b1 595 SUPERFAMILY SSF52540 343 589 1.41E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS02470 afc8180add4b26c0dad7aea057c411b1 595 SUPERFAMILY SSF90123 23 336 3.27E-68 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJD35_RS02470 afc8180add4b26c0dad7aea057c411b1 595 Pfam PF00664 ABC transporter transmembrane region 37 294 6.7E-46 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 498 4.0E-121 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 PRINTS PR00045 Sigma-54 factor signature 212 229 3.8E-29 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 PRINTS PR00045 Sigma-54 factor signature 415 426 3.8E-29 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 PRINTS PR00045 Sigma-54 factor signature 474 492 3.8E-29 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 PRINTS PR00045 Sigma-54 factor signature 399 411 3.8E-29 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 PIRSF PIRSF000774 1 501 7.7E-135 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 Pfam PF04552 Sigma-54, DNA binding domain 340 499 8.6E-68 T 28-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 50 1.6E-15 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 387 406 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 479 486 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 Gene3D G3DSA:1.10.10.10 345 437 7.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07355 68dae5dc253ce95de02fafddf6cdfe0b 508 Pfam PF04963 Sigma-54 factor, core binding domain 140 325 9.9E-46 T 28-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CJD35_RS16290 676bf1f133deb6af18b8dded1c0a5980 540 SUPERFAMILY SSF54373 288 472 2.85E-40 T 28-03-2018 CJD35_RS16290 676bf1f133deb6af18b8dded1c0a5980 540 Pfam PF05199 GMC oxidoreductase 386 523 6.7E-37 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS16290 676bf1f133deb6af18b8dded1c0a5980 540 Gene3D G3DSA:4.10.450.10 45 102 2.3E-25 T 28-03-2018 CJD35_RS16290 676bf1f133deb6af18b8dded1c0a5980 540 SUPERFAMILY SSF51905 471 533 5.96E-78 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16290 676bf1f133deb6af18b8dded1c0a5980 540 SUPERFAMILY SSF51905 4 286 5.96E-78 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16290 676bf1f133deb6af18b8dded1c0a5980 540 Pfam PF00732 GMC oxidoreductase 5 293 8.3E-76 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS16290 676bf1f133deb6af18b8dded1c0a5980 540 Gene3D G3DSA:3.50.50.60 2 44 2.5E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16290 676bf1f133deb6af18b8dded1c0a5980 540 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 252 266 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS16290 676bf1f133deb6af18b8dded1c0a5980 540 Gene3D G3DSA:3.30.560.10 103 487 1.3E-95 T 28-03-2018 CJD35_RS16290 676bf1f133deb6af18b8dded1c0a5980 540 PIRSF PIRSF000137 2 537 1.3E-141 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS16290 676bf1f133deb6af18b8dded1c0a5980 540 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 80 103 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS13675 4fe1bfd97462fc0172a341d908bdc136 646 Gene3D G3DSA:2.160.20.10 146 616 8.0E-17 T 28-03-2018 IPR012334 Pectin lyase fold CJD35_RS13675 4fe1bfd97462fc0172a341d908bdc136 646 SUPERFAMILY SSF117074 13 82 1.57E-7 T 28-03-2018 CJD35_RS13675 4fe1bfd97462fc0172a341d908bdc136 646 SUPERFAMILY SSF51126 139 512 3.44E-12 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CJD35_RS13675 4fe1bfd97462fc0172a341d908bdc136 646 SMART SM00710 242 264 7000.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS13675 4fe1bfd97462fc0172a341d908bdc136 646 SMART SM00710 308 330 110.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS13675 4fe1bfd97462fc0172a341d908bdc136 646 SMART SM00710 447 468 1500.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS13675 4fe1bfd97462fc0172a341d908bdc136 646 SMART SM00710 335 371 4400.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS13675 4fe1bfd97462fc0172a341d908bdc136 646 SMART SM00710 474 496 1300.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS13675 4fe1bfd97462fc0172a341d908bdc136 646 Gene3D G3DSA:2.60.40.1120 15 126 3.8E-7 T 28-03-2018 CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 5 327 2.7E-134 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 SUPERFAMILY SSF52922 525 654 6.15E-40 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 SUPERFAMILY SSF52518 332 518 2.42E-66 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 SMART SM00861 346 517 3.1E-67 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 Gene3D G3DSA:3.40.50.970 1 349 3.0E-106 T 28-03-2018 CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 Pfam PF02780 Transketolase, C-terminal domain 540 645 1.7E-11 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 Gene3D G3DSA:3.40.50.920 529 655 6.6E-32 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 Pfam PF02779 Transketolase, pyrimidine binding domain 345 516 2.7E-45 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 SUPERFAMILY SSF52518 6 310 3.33E-106 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 650 9.2E-249 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 Gene3D G3DSA:3.40.50.970 350 526 1.1E-47 T 28-03-2018 CJD35_RS13255 f870fa5574a86dbae2660432eacda0e2 655 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CJD35_RS10935 3da2733f488ea6147cd33b6c1ff3d534 310 Gene3D G3DSA:3.40.50.300 1 292 4.3E-63 T 28-03-2018 CJD35_RS10935 3da2733f488ea6147cd33b6c1ff3d534 310 SUPERFAMILY SSF52540 4 227 2.36E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS10935 3da2733f488ea6147cd33b6c1ff3d534 310 SMART SM00382 30 211 1.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS10935 3da2733f488ea6147cd33b6c1ff3d534 310 Pfam PF00005 ABC transporter 21 163 1.9E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS10935 3da2733f488ea6147cd33b6c1ff3d534 310 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS16640 ba8569f1b739c0ba4dbc07f3552a566d 205 SUPERFAMILY SSF54427 18 174 4.97E-31 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS16640 ba8569f1b739c0ba4dbc07f3552a566d 205 Gene3D G3DSA:3.10.450.50 1 151 3.5E-27 T 28-03-2018 CJD35_RS16640 ba8569f1b739c0ba4dbc07f3552a566d 205 Pfam PF13577 SnoaL-like domain 22 148 7.0E-32 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS17290 2b47d15cf479182b98cb123e88591ea9 332 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 322 1.9E-94 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CJD35_RS17290 2b47d15cf479182b98cb123e88591ea9 332 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 4 210 2.6E-41 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CJD35_RS02505 055151c3459ba1b37fca5233cb0033a0 434 Pfam PF01842 ACT domain 355 407 1.5E-8 T 28-03-2018 IPR002912 ACT domain CJD35_RS02505 055151c3459ba1b37fca5233cb0033a0 434 Gene3D G3DSA:3.40.50.720 6 164 4.4E-31 T 28-03-2018 CJD35_RS02505 055151c3459ba1b37fca5233cb0033a0 434 SUPERFAMILY SSF55021 354 421 1.37E-10 T 28-03-2018 CJD35_RS02505 055151c3459ba1b37fca5233cb0033a0 434 Gene3D G3DSA:3.30.360.10 165 305 5.5E-53 T 28-03-2018 CJD35_RS02505 055151c3459ba1b37fca5233cb0033a0 434 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 190 212 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CJD35_RS02505 055151c3459ba1b37fca5233cb0033a0 434 PIRSF PIRSF000098 7 434 1.1E-147 T 28-03-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CJD35_RS02505 055151c3459ba1b37fca5233cb0033a0 434 Gene3D G3DSA:3.30.70.260 352 431 6.9E-14 T 28-03-2018 CJD35_RS02505 055151c3459ba1b37fca5233cb0033a0 434 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 16 136 6.3E-14 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CJD35_RS02505 055151c3459ba1b37fca5233cb0033a0 434 SUPERFAMILY SSF51735 9 147 4.98E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS02505 055151c3459ba1b37fca5233cb0033a0 434 Pfam PF00742 Homoserine dehydrogenase 144 322 2.6E-64 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CJD35_RS02505 055151c3459ba1b37fca5233cb0033a0 434 SUPERFAMILY SSF55347 144 309 1.57E-53 T 28-03-2018 CJD35_RS05760 14b2bc4401e79885f465c33b32e583e2 248 SUPERFAMILY SSF51419 8 225 3.53E-65 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS05760 14b2bc4401e79885f465c33b32e583e2 248 Pfam PF01168 Alanine racemase, N-terminal domain 22 228 2.6E-19 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS05760 14b2bc4401e79885f465c33b32e583e2 248 PIRSF PIRSF004848 3 233 4.8E-57 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CJD35_RS05760 14b2bc4401e79885f465c33b32e583e2 248 Gene3D G3DSA:3.20.20.10 2 233 4.5E-56 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS05760 14b2bc4401e79885f465c33b32e583e2 248 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 12 227 8.6E-47 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CJD35_RS09190 eb12acc7388dace3b8eb720cd350dc49 312 Gene3D G3DSA:3.40.50.300 102 308 2.1E-39 T 28-03-2018 CJD35_RS09190 eb12acc7388dace3b8eb720cd350dc49 312 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 35 307 55.044 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CJD35_RS09190 eb12acc7388dace3b8eb720cd350dc49 312 SMART SM00962 106 307 1.4E-105 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CJD35_RS09190 eb12acc7388dace3b8eb720cd350dc49 312 Gene3D G3DSA:1.20.120.140 2 89 1.5E-18 T 28-03-2018 CJD35_RS09190 eb12acc7388dace3b8eb720cd350dc49 312 SMART SM00963 12 91 8.9E-14 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CJD35_RS09190 eb12acc7388dace3b8eb720cd350dc49 312 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 37 305 3.1E-96 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CJD35_RS09190 eb12acc7388dace3b8eb720cd350dc49 312 SUPERFAMILY SSF52540 103 305 5.38E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09190 eb12acc7388dace3b8eb720cd350dc49 312 Pfam PF00448 SRP54-type protein, GTPase domain 106 305 2.7E-72 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CJD35_RS09190 eb12acc7388dace3b8eb720cd350dc49 312 SUPERFAMILY SSF47364 6 84 1.44E-16 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CJD35_RS09190 eb12acc7388dace3b8eb720cd350dc49 312 Pfam PF02881 SRP54-type protein, helical bundle domain 21 86 4.0E-9 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CJD35_RS09190 eb12acc7388dace3b8eb720cd350dc49 312 SMART SM00382 105 285 1.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS01920 e03cd488b352084648d10ad79a7f149f 680 Gene3D G3DSA:2.40.170.20 168 680 1.5E-56 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS01920 e03cd488b352084648d10ad79a7f149f 680 Gene3D G3DSA:2.170.130.10 23 164 7.5E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS01920 e03cd488b352084648d10ad79a7f149f 680 SUPERFAMILY SSF56935 23 680 3.92E-92 T 28-03-2018 CJD35_RS01920 e03cd488b352084648d10ad79a7f149f 680 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 159 6.1E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS01920 e03cd488b352084648d10ad79a7f149f 680 Pfam PF00593 TonB dependent receptor 256 678 1.4E-35 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS14525 5b0861fe415dccd96bd26b75d699235e 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 7.5E-35 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS14525 5b0861fe415dccd96bd26b75d699235e 90 SUPERFAMILY SSF47729 1 90 6.77E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS14525 5b0861fe415dccd96bd26b75d699235e 90 Gene3D G3DSA:4.10.520.10 1 90 3.5E-36 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS14525 5b0861fe415dccd96bd26b75d699235e 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CJD35_RS14525 5b0861fe415dccd96bd26b75d699235e 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.3E-16 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS14525 5b0861fe415dccd96bd26b75d699235e 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.3E-16 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS14525 5b0861fe415dccd96bd26b75d699235e 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.3E-16 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS14525 5b0861fe415dccd96bd26b75d699235e 90 SMART SM00411 1 90 3.8E-42 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS12465 ec8f9d09aef8fc95e786fda35b518c9b 348 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 134 303 1.5E-10 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJD35_RS12465 ec8f9d09aef8fc95e786fda35b518c9b 348 SUPERFAMILY SSF111369 56 116 6.54E-5 T 28-03-2018 CJD35_RS12465 ec8f9d09aef8fc95e786fda35b518c9b 348 SUPERFAMILY SSF111369 150 192 6.54E-5 T 28-03-2018 CJD35_RS12465 ec8f9d09aef8fc95e786fda35b518c9b 348 SUPERFAMILY SSF111369 204 278 3.01E-7 T 28-03-2018 CJD35_RS12465 ec8f9d09aef8fc95e786fda35b518c9b 348 Pfam PF13533 Biotin-lipoyl like 65 111 8.6E-6 T 28-03-2018 CJD35_RS12465 ec8f9d09aef8fc95e786fda35b518c9b 348 Gene3D G3DSA:2.40.50.100 59 262 7.0E-17 T 28-03-2018 CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 280 4.9E-60 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 Gene3D G3DSA:3.40.50.720 107 282 1.9E-57 T 28-03-2018 CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 SUPERFAMILY SSF143548 318 446 4.45E-37 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 SUPERFAMILY SSF52283 1 135 1.47E-36 T 28-03-2018 CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 Gene3D G3DSA:3.30.70.260 447 523 3.1E-13 T 28-03-2018 CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 312 5.6E-36 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 524 1.4E-201 T 28-03-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 Gene3D G3DSA:3.40.50.720 1 106 2.9E-36 T 28-03-2018 CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 Gene3D G3DSA:3.30.1330.90 316 446 2.1E-38 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 SUPERFAMILY SSF51735 97 281 1.86E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS07120 c937acddc896fabf4cae402e7d2d81a9 526 SUPERFAMILY SSF55021 450 524 1.29E-13 T 28-03-2018 CJD35_RS08620 d0ba85c90ddc7b3a3de6e0cfa6693a38 131 Gene3D G3DSA:3.30.1370.30 1 67 4.2E-22 T 28-03-2018 CJD35_RS08620 d0ba85c90ddc7b3a3de6e0cfa6693a38 131 Pfam PF00410 Ribosomal protein S8 5 131 1.2E-45 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08620 d0ba85c90ddc7b3a3de6e0cfa6693a38 131 Gene3D G3DSA:3.30.1490.10 69 128 2.7E-21 T 28-03-2018 CJD35_RS08620 d0ba85c90ddc7b3a3de6e0cfa6693a38 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 29.837 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08620 d0ba85c90ddc7b3a3de6e0cfa6693a38 131 ProSitePatterns PS00053 Ribosomal protein S8 signature. 101 118 - T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08620 d0ba85c90ddc7b3a3de6e0cfa6693a38 131 SUPERFAMILY SSF56047 3 131 1.11E-42 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS19510 ba1291919377e4c49d2eadea19818d23 330 Pfam PF13478 XdhC Rossmann domain 171 311 4.5E-30 T 28-03-2018 IPR027051 XdhC Rossmann domain CJD35_RS19510 ba1291919377e4c49d2eadea19818d23 330 Pfam PF02625 XdhC and CoxI family 24 90 1.7E-16 T 28-03-2018 IPR003777 XdhC- CoxI CJD35_RS19510 ba1291919377e4c49d2eadea19818d23 330 Gene3D G3DSA:3.50.50.60 121 284 4.7E-4 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS01475 e7d362d4517dff8b636e9df35d6a1aec 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 69 1.9E-34 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01475 e7d362d4517dff8b636e9df35d6a1aec 74 ProSitePatterns PS01143 Ribosomal protein L31 signature. 38 59 - T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01475 e7d362d4517dff8b636e9df35d6a1aec 74 PRINTS PR01249 Ribosomal protein L31 signature 34 49 3.9E-12 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01475 e7d362d4517dff8b636e9df35d6a1aec 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.9E-12 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01475 e7d362d4517dff8b636e9df35d6a1aec 74 PRINTS PR01249 Ribosomal protein L31 signature 49 67 3.9E-12 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01475 e7d362d4517dff8b636e9df35d6a1aec 74 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 71 26.247 T 28-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01475 e7d362d4517dff8b636e9df35d6a1aec 74 Pfam PF01197 Ribosomal protein L31 1 68 1.4E-26 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01475 e7d362d4517dff8b636e9df35d6a1aec 74 SUPERFAMILY SSF143800 1 71 2.67E-23 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 Gene3D G3DSA:3.40.50.300 518 865 7.7E-53 T 28-03-2018 CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 Gene3D G3DSA:1.20.1580.10 88 400 9.8E-59 T 28-03-2018 CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 SUPERFAMILY SSF52540 529 571 3.45E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 SUPERFAMILY SSF52540 609 836 3.45E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 Pfam PF00005 ABC transporter 536 786 1.8E-6 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 Gene3D G3DSA:3.40.50.300 5 31 0.06 T 28-03-2018 CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 ProSitePatterns PS00211 ABC transporters family signature. 755 769 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 Gene3D G3DSA:3.40.50.300 32 65 0.11 T 28-03-2018 CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 SUPERFAMILY SSF52540 138 272 1.03E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 SUPERFAMILY SSF52540 348 482 1.03E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 SUPERFAMILY SSF52540 3 84 1.03E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12520 a7e268fbd33abff6dd7fceca6c60734b 865 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS07870 c83212d5054bb39061c0d91a352dca1c 271 Gene3D G3DSA:3.20.20.60 1 224 1.3E-52 T 28-03-2018 CJD35_RS07870 c83212d5054bb39061c0d91a352dca1c 271 SUPERFAMILY SSF51621 3 224 1.97E-63 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJD35_RS07870 c83212d5054bb39061c0d91a352dca1c 271 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 7 212 4.8E-42 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CJD35_RS07870 c83212d5054bb39061c0d91a352dca1c 271 PIRSF PIRSF015582 1 271 4.8E-70 T 28-03-2018 IPR011206 Citrate lyase beta subunit-like CJD35_RS13895 622ba99f748cf1dc843a5b35840fb46a 701 Pfam PF02706 Chain length determinant protein 31 117 2.4E-8 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CJD35_RS13895 622ba99f748cf1dc843a5b35840fb46a 701 Pfam PF13614 AAA domain 519 640 6.9E-9 T 28-03-2018 IPR025669 AAA domain CJD35_RS13895 622ba99f748cf1dc843a5b35840fb46a 701 Gene3D G3DSA:3.40.50.300 501 699 9.2E-31 T 28-03-2018 CJD35_RS13895 622ba99f748cf1dc843a5b35840fb46a 701 Gene3D G3DSA:3.30.1890.10 55 439 2.4E-27 T 28-03-2018 CJD35_RS13895 622ba99f748cf1dc843a5b35840fb46a 701 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 502 698 3.7E-43 T 28-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CJD35_RS13895 622ba99f748cf1dc843a5b35840fb46a 701 SUPERFAMILY SSF52540 516 692 8.45E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09550 cec01f6f871c6d399733cc117f57048d 405 SUPERFAMILY SSF56563 124 399 4.05E-40 T 28-03-2018 CJD35_RS09550 cec01f6f871c6d399733cc117f57048d 405 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 5 398 1.9E-37 T 28-03-2018 IPR024455 Phage capsid CJD35_RS09550 cec01f6f871c6d399733cc117f57048d 405 Pfam PF05065 Phage capsid family 131 398 3.2E-38 T 28-03-2018 IPR024455 Phage capsid CJD35_RS09550 cec01f6f871c6d399733cc117f57048d 405 Gene3D G3DSA:3.30.2400.10 151 288 3.6E-25 T 28-03-2018 CJD35_RS01615 ead1bb14c7cb122e54b5a4b18055c67f 370 SUPERFAMILY SSF52540 48 188 1.31E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01615 ead1bb14c7cb122e54b5a4b18055c67f 370 Gene3D G3DSA:3.40.50.300 29 197 2.7E-10 T 28-03-2018 CJD35_RS01615 ead1bb14c7cb122e54b5a4b18055c67f 370 Pfam PF03969 AFG1-like ATPase 4 364 5.4E-120 T 28-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 Pfam PF00140 Sigma-70 factor, region 1.2 19 48 1.1E-7 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 52 287 8.2E-27 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 Gene3D G3DSA:1.10.10.60 135 175 0.25 T 28-03-2018 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 PRINTS PR00046 Major sigma-70 factor signature 258 273 4.4E-21 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 PRINTS PR00046 Major sigma-70 factor signature 81 94 4.4E-21 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 PRINTS PR00046 Major sigma-70 factor signature 273 284 4.4E-21 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 PRINTS PR00046 Major sigma-70 factor signature 105 113 4.4E-21 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 PRINTS PR00046 Major sigma-70 factor signature 239 251 4.4E-21 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 Pfam PF04545 Sigma-70, region 4 235 284 3.6E-15 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 SUPERFAMILY SSF88659 195 289 3.55E-18 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 6 290 47.299 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 Gene3D G3DSA:1.10.601.10 3 124 5.7E-38 T 28-03-2018 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 Pfam PF04542 Sigma-70 region 2 57 125 4.0E-17 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 Gene3D G3DSA:1.10.10.10 176 229 0.18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 SUPERFAMILY SSF88946 16 125 8.95E-39 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 258 284 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 19 289 5.8E-103 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 81 94 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS18845 4af4720445d3fce40eb8e56103f2de44 312 Gene3D G3DSA:1.10.10.10 230 296 5.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10435 96289fcf6a9be65f8623f9b1985f2433 464 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 13 460 4.3E-110 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10435 96289fcf6a9be65f8623f9b1985f2433 464 Pfam PF08245 Mur ligase middle domain 114 302 4.2E-28 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS10435 96289fcf6a9be65f8623f9b1985f2433 464 SUPERFAMILY SSF51984 7 94 5.1E-11 T 28-03-2018 CJD35_RS10435 96289fcf6a9be65f8623f9b1985f2433 464 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 463 30.997 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10435 96289fcf6a9be65f8623f9b1985f2433 464 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 390 1.9E-6 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CJD35_RS10435 96289fcf6a9be65f8623f9b1985f2433 464 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 112 135 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CJD35_RS10435 96289fcf6a9be65f8623f9b1985f2433 464 SUPERFAMILY SSF53623 68 336 3.66E-47 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS10435 96289fcf6a9be65f8623f9b1985f2433 464 Gene3D G3DSA:3.40.50.720 2 94 1.8E-8 T 28-03-2018 CJD35_RS10435 96289fcf6a9be65f8623f9b1985f2433 464 SUPERFAMILY SSF53244 322 463 1.3E-41 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CJD35_RS10435 96289fcf6a9be65f8623f9b1985f2433 464 Gene3D G3DSA:3.90.190.20 322 460 2.7E-35 T 28-03-2018 CJD35_RS10435 96289fcf6a9be65f8623f9b1985f2433 464 Gene3D G3DSA:3.40.1190.10 96 320 9.8E-49 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS12020 385a301298e77e30ae29a2337f625a31 466 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 227 234 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS12020 385a301298e77e30ae29a2337f625a31 466 SUPERFAMILY SSF53720 3 438 7.33E-102 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS12020 385a301298e77e30ae29a2337f625a31 466 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 458 3.9E-187 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CJD35_RS12020 385a301298e77e30ae29a2337f625a31 466 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 253 264 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS12020 385a301298e77e30ae29a2337f625a31 466 Gene3D G3DSA:3.40.309.10 248 431 1.3E-37 T 28-03-2018 CJD35_RS12020 385a301298e77e30ae29a2337f625a31 466 Pfam PF00171 Aldehyde dehydrogenase family 4 443 4.8E-101 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS12020 385a301298e77e30ae29a2337f625a31 466 Gene3D G3DSA:3.40.605.10 1 247 5.4E-60 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS08570 b742f7f9342a6e00061296f47b861de6 91 PIRSF PIRSF002144 1 91 2.4E-31 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08570 b742f7f9342a6e00061296f47b861de6 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.057 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08570 b742f7f9342a6e00061296f47b861de6 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.9E-41 T 28-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CJD35_RS08570 b742f7f9342a6e00061296f47b861de6 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.8E-22 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08570 b742f7f9342a6e00061296f47b861de6 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.8E-22 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08570 b742f7f9342a6e00061296f47b861de6 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.8E-22 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08570 b742f7f9342a6e00061296f47b861de6 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 28-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08570 b742f7f9342a6e00061296f47b861de6 91 Gene3D G3DSA:3.30.860.10 1 91 6.3E-39 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08570 b742f7f9342a6e00061296f47b861de6 91 Pfam PF00203 Ribosomal protein S19 3 83 2.7E-35 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08570 b742f7f9342a6e00061296f47b861de6 91 SUPERFAMILY SSF54570 3 84 4.84E-33 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS18120 39c219b9a8cf114a7e6a1327ef594b3d 173 Gene3D G3DSA:3.40.50.620 29 172 4.4E-24 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS18120 39c219b9a8cf114a7e6a1327ef594b3d 173 Gene3D G3DSA:3.40.50.620 1 28 0.012 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS18120 39c219b9a8cf114a7e6a1327ef594b3d 173 PRINTS PR01438 Universal stress protein signature 128 140 4.1E-12 T 28-03-2018 IPR006015 Universal stress protein A CJD35_RS18120 39c219b9a8cf114a7e6a1327ef594b3d 173 PRINTS PR01438 Universal stress protein signature 32 50 4.1E-12 T 28-03-2018 IPR006015 Universal stress protein A CJD35_RS18120 39c219b9a8cf114a7e6a1327ef594b3d 173 PRINTS PR01438 Universal stress protein signature 146 168 4.1E-12 T 28-03-2018 IPR006015 Universal stress protein A CJD35_RS18120 39c219b9a8cf114a7e6a1327ef594b3d 173 SUPERFAMILY SSF52402 32 169 2.26E-22 T 28-03-2018 CJD35_RS18120 39c219b9a8cf114a7e6a1327ef594b3d 173 Pfam PF00582 Universal stress protein family 32 168 4.6E-18 T 28-03-2018 IPR006016 UspA GO:0006950 CJD35_RS21240 39c219b9a8cf114a7e6a1327ef594b3d 173 Gene3D G3DSA:3.40.50.620 29 172 4.4E-24 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS21240 39c219b9a8cf114a7e6a1327ef594b3d 173 Gene3D G3DSA:3.40.50.620 1 28 0.012 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS21240 39c219b9a8cf114a7e6a1327ef594b3d 173 PRINTS PR01438 Universal stress protein signature 128 140 4.1E-12 T 28-03-2018 IPR006015 Universal stress protein A CJD35_RS21240 39c219b9a8cf114a7e6a1327ef594b3d 173 PRINTS PR01438 Universal stress protein signature 32 50 4.1E-12 T 28-03-2018 IPR006015 Universal stress protein A CJD35_RS21240 39c219b9a8cf114a7e6a1327ef594b3d 173 PRINTS PR01438 Universal stress protein signature 146 168 4.1E-12 T 28-03-2018 IPR006015 Universal stress protein A CJD35_RS21240 39c219b9a8cf114a7e6a1327ef594b3d 173 SUPERFAMILY SSF52402 32 169 2.26E-22 T 28-03-2018 CJD35_RS21240 39c219b9a8cf114a7e6a1327ef594b3d 173 Pfam PF00582 Universal stress protein family 32 168 4.6E-18 T 28-03-2018 IPR006016 UspA GO:0006950 CJD35_RS02970 6208c28429a503bb7aeb8648b101e1ff 177 Pfam PF00156 Phosphoribosyl transferase domain 40 144 5.4E-16 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CJD35_RS02970 6208c28429a503bb7aeb8648b101e1ff 177 Gene3D G3DSA:3.40.50.2020 1 175 5.3E-45 T 28-03-2018 CJD35_RS02970 6208c28429a503bb7aeb8648b101e1ff 177 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 5 170 1.3E-55 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CJD35_RS02970 6208c28429a503bb7aeb8648b101e1ff 177 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 5 174 33.834 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CJD35_RS02970 6208c28429a503bb7aeb8648b101e1ff 177 SUPERFAMILY SSF53271 7 171 5.51E-51 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 Gene3D G3DSA:1.25.40.20 233 292 2.8E-12 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SUPERFAMILY SSF48403 32 288 5.96E-47 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 Gene3D G3DSA:1.25.40.20 20 99 8.6E-16 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SMART SM00248 93 122 0.52 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SMART SM00248 343 372 1300.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SMART SM00248 27 56 3500.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SMART SM00248 192 221 46.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SMART SM00248 126 155 33.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SMART SM00248 225 254 210.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SMART SM00248 159 188 6.3E-4 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SMART SM00248 60 89 2.5 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SMART SM00248 310 339 1000.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SMART SM00248 258 287 0.12 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SMART SM00248 376 409 150.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 Gene3D G3DSA:1.25.40.20 100 152 2.0E-16 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 SUPERFAMILY SSF48403 229 422 3.25E-18 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 Gene3D G3DSA:1.25.40.20 153 232 2.4E-21 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 Gene3D G3DSA:1.25.40.20 307 436 1.5E-18 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 Pfam PF12796 Ankyrin repeats (3 copies) 131 218 3.5E-10 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS17510 6485791e824a4e420505f299ee6b6463 455 Pfam PF12796 Ankyrin repeats (3 copies) 38 120 1.1E-7 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CJD35_RS17000 6e25478b362f2edcfd02b5db99a2af4c 404 Gene3D G3DSA:3.40.190.10 123 338 1.1E-34 T 28-03-2018 CJD35_RS17000 6e25478b362f2edcfd02b5db99a2af4c 404 Pfam PF13379 NMT1-like family 3 257 4.2E-64 T 28-03-2018 CJD35_RS17000 6e25478b362f2edcfd02b5db99a2af4c 404 SUPERFAMILY SSF53850 5 246 2.17E-25 T 28-03-2018 CJD35_RS17000 6e25478b362f2edcfd02b5db99a2af4c 404 Gene3D G3DSA:3.40.190.10 2 122 1.6E-9 T 28-03-2018 CJD35_RS09090 cab0e3e6fb88522e7a356e53adc2f4bc 187 Gene3D G3DSA:1.10.260.40 1 73 1.2E-12 T 28-03-2018 CJD35_RS09090 cab0e3e6fb88522e7a356e53adc2f4bc 187 Pfam PF13560 Helix-turn-helix domain 4 64 1.1E-9 T 28-03-2018 CJD35_RS09090 cab0e3e6fb88522e7a356e53adc2f4bc 187 SMART SM00530 4 61 1.3E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS09090 cab0e3e6fb88522e7a356e53adc2f4bc 187 SUPERFAMILY SSF47413 3 65 9.48E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS07710 f4036763334f978afccd7b441c7b187b 300 Gene3D G3DSA:3.40.190.10 174 257 1.4E-13 T 28-03-2018 CJD35_RS07710 f4036763334f978afccd7b441c7b187b 300 SUPERFAMILY SSF53850 87 290 2.31E-26 T 28-03-2018 CJD35_RS07710 f4036763334f978afccd7b441c7b187b 300 Gene3D G3DSA:3.40.190.10 89 173 2.7E-10 T 28-03-2018 CJD35_RS07710 f4036763334f978afccd7b441c7b187b 300 Gene3D G3DSA:1.10.10.10 1 83 6.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07710 f4036763334f978afccd7b441c7b187b 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.3E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS07710 f4036763334f978afccd7b441c7b187b 300 Pfam PF03466 LysR substrate binding domain 87 289 7.0E-24 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS07710 f4036763334f978afccd7b441c7b187b 300 SUPERFAMILY SSF46785 1 84 1.82E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07710 f4036763334f978afccd7b441c7b187b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS07710 f4036763334f978afccd7b441c7b187b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS07710 f4036763334f978afccd7b441c7b187b 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 Gene3D G3DSA:3.10.20.30 1 64 1.3E-24 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 Pfam PF02824 TGS domain 3 61 3.3E-15 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 Gene3D G3DSA:3.40.50.800 556 659 3.7E-24 T 28-03-2018 IPR004154 Anticodon-binding CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 SUPERFAMILY SSF55186 65 247 5.49E-51 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 SUPERFAMILY SSF55681 249 550 4.4E-93 T 28-03-2018 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 531 544 1.7E-49 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 488 516 1.7E-49 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 558 570 1.7E-49 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 349 377 1.7E-49 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 PRINTS PR01047 Threonyl-tRNA synthetase signature 382 405 1.7E-49 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 655 1.8E-190 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 SUPERFAMILY SSF81271 3 61 1.16E-16 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 SMART SM00863 173 225 1.8E-20 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 Gene3D G3DSA:3.30.930.10 235 555 5.0E-114 T 28-03-2018 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 225 5.6E-12 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 Gene3D G3DSA:3.30.980.10 68 234 1.4E-34 T 28-03-2018 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 SUPERFAMILY SSF52954 553 655 8.16E-29 T 28-03-2018 IPR004154 Anticodon-binding CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 658 31.473 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 Pfam PF03129 Anticodon binding domain 565 654 9.7E-18 T 28-03-2018 IPR004154 Anticodon-binding CJD35_RS08815 04452a8c15c0c3c45cd285d9627b7d41 662 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 344 553 3.5E-42 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS03175 b3a3a56d2ae631f9453ea41dd868bcc0 712 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 187 204 7.3E-51 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJD35_RS03175 b3a3a56d2ae631f9453ea41dd868bcc0 712 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 157 175 7.3E-51 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJD35_RS03175 b3a3a56d2ae631f9453ea41dd868bcc0 712 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 238 252 7.3E-51 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJD35_RS03175 b3a3a56d2ae631f9453ea41dd868bcc0 712 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 138 154 7.3E-51 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJD35_RS03175 b3a3a56d2ae631f9453ea41dd868bcc0 712 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 34 47 7.3E-51 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJD35_RS03175 b3a3a56d2ae631f9453ea41dd868bcc0 712 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 71 90 7.3E-51 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJD35_RS03175 b3a3a56d2ae631f9453ea41dd868bcc0 712 Pfam PF00771 FHIPEP family 27 676 8.8E-236 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJD35_RS03175 b3a3a56d2ae631f9453ea41dd868bcc0 712 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 18 686 3.9E-253 T 28-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CJD35_RS03175 b3a3a56d2ae631f9453ea41dd868bcc0 712 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 143 166 - T 28-03-2018 IPR025505 FHIPEP conserved site CJD35_RS03175 b3a3a56d2ae631f9453ea41dd868bcc0 712 PIRSF PIRSF005419 3 691 2.1E-213 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CJD35_RS20905 200fefac4884c8a2ddd0af16ec5ba0b6 221 SUPERFAMILY SSF53955 72 150 3.82E-10 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS20905 200fefac4884c8a2ddd0af16ec5ba0b6 221 SUPERFAMILY SSF53955 18 43 3.82E-10 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS20905 200fefac4884c8a2ddd0af16ec5ba0b6 221 Pfam PF01464 Transglycosylase SLT domain 11 150 1.8E-12 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CJD35_RS20905 200fefac4884c8a2ddd0af16ec5ba0b6 221 Gene3D G3DSA:1.10.530.10 6 185 1.1E-10 T 28-03-2018 CJD35_RS17165 aa6be524122f17b08b11327760397ef1 816 Pfam PF00593 TonB dependent receptor 271 814 1.2E-29 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17165 aa6be524122f17b08b11327760397ef1 816 Gene3D G3DSA:2.40.170.20 172 816 1.4E-53 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17165 aa6be524122f17b08b11327760397ef1 816 Gene3D G3DSA:2.170.130.10 26 171 9.3E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17165 aa6be524122f17b08b11327760397ef1 816 SUPERFAMILY SSF56935 562 816 4.58E-96 T 28-03-2018 CJD35_RS17165 aa6be524122f17b08b11327760397ef1 816 SUPERFAMILY SSF56935 26 528 4.58E-96 T 28-03-2018 CJD35_RS17165 aa6be524122f17b08b11327760397ef1 816 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 162 2.8E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS04330 6052344abd9aa995ef1d29582e39d78c 206 Gene3D G3DSA:1.10.287.110 63 203 1.9E-9 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS04330 6052344abd9aa995ef1d29582e39d78c 206 SUPERFAMILY SSF46565 68 201 5.0E-10 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS04330 6052344abd9aa995ef1d29582e39d78c 206 Pfam PF00226 DnaJ domain 151 201 1.1E-6 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS04330 6052344abd9aa995ef1d29582e39d78c 206 SMART SM00271 146 204 0.0093 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS06840 c81321d7644bd1890d45cbc881c8e94f 112 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 4 101 2.3E-10 T 28-03-2018 IPR009799 EthD domain CJD35_RS06840 c81321d7644bd1890d45cbc881c8e94f 112 SUPERFAMILY SSF54909 4 102 4.02E-18 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS06840 c81321d7644bd1890d45cbc881c8e94f 112 Pfam PF09448 Methylmuconolactone methyl-isomerase 4 89 9.3E-10 T 28-03-2018 IPR018566 4-Methylmuconolactone methyl-isomerase CJD35_RS06840 c81321d7644bd1890d45cbc881c8e94f 112 Gene3D G3DSA:3.30.70.100 1 97 6.5E-19 T 28-03-2018 CJD35_RS13105 aab4e5ea29dee5126eaf00a2a92a1cd9 328 SUPERFAMILY SSF56112 2 308 3.5E-48 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS13105 aab4e5ea29dee5126eaf00a2a92a1cd9 328 Gene3D G3DSA:3.90.1200.10 90 325 5.6E-33 T 28-03-2018 CJD35_RS13105 aab4e5ea29dee5126eaf00a2a92a1cd9 328 Pfam PF01636 Phosphotransferase enzyme family 21 242 2.9E-26 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CJD35_RS13105 aab4e5ea29dee5126eaf00a2a92a1cd9 328 Gene3D G3DSA:3.30.200.20 5 89 7.6E-29 T 28-03-2018 CJD35_RS12325 9a49915b57274afc78c357cd19e7478d 283 Pfam PF01039 Carboxyl transferase domain 105 238 1.1E-10 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CJD35_RS12325 9a49915b57274afc78c357cd19e7478d 283 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 280 2.2E-107 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS12325 9a49915b57274afc78c357cd19e7478d 283 SUPERFAMILY SSF52096 24 279 8.29E-77 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS12325 9a49915b57274afc78c357cd19e7478d 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 2.3E-36 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS12325 9a49915b57274afc78c357cd19e7478d 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 2.3E-36 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS12325 9a49915b57274afc78c357cd19e7478d 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 2.3E-36 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS12325 9a49915b57274afc78c357cd19e7478d 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 2.3E-36 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS12325 9a49915b57274afc78c357cd19e7478d 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 2.3E-36 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS12325 9a49915b57274afc78c357cd19e7478d 283 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 35.88 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS12325 9a49915b57274afc78c357cd19e7478d 283 Gene3D G3DSA:3.90.226.10 13 283 2.4E-61 T 28-03-2018 CJD35_RS16455 f7fa3a3842e1b183e7be85b52e3cb646 247 Pfam PF10670 Domain of unknown function (DUF4198) 23 220 2.5E-16 T 28-03-2018 IPR019613 Protein of unknown function DUF4198 CJD35_RS16455 f7fa3a3842e1b183e7be85b52e3cb646 247 Gene3D G3DSA:2.60.40.10 144 237 0.0012 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 Pfam PF13360 PQQ-like domain 89 308 7.7E-18 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 SMART SM00564 90 122 1.5E-6 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 SMART SM00564 491 523 7.8E-6 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 SMART SM00564 185 222 9.5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 SMART SM00564 140 171 6.9E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 SMART SM00564 440 482 0.38 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 SMART SM00564 284 311 110.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 259 280 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 Pfam PF01011 PQQ enzyme repeat 497 533 1.0E-10 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 30 551 1.8E-234 T 28-03-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 SUPERFAMILY SSF50998 36 574 1.27E-163 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CJD35_RS06150 a1be21e2d633edd6072a179c29224df3 581 Gene3D G3DSA:2.140.10.10 25 580 2.3E-121 T 28-03-2018 CJD35_RS03645 53c38271dff7ebdf34bf3483a18b80fe 223 Gene3D G3DSA:3.40.30.10 2 94 7.3E-25 T 28-03-2018 CJD35_RS03645 53c38271dff7ebdf34bf3483a18b80fe 223 SUPERFAMILY SSF52833 1 104 5.24E-25 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS03645 53c38271dff7ebdf34bf3483a18b80fe 223 Pfam PF13410 Glutathione S-transferase, C-terminal domain 134 193 1.8E-7 T 28-03-2018 CJD35_RS03645 53c38271dff7ebdf34bf3483a18b80fe 223 Gene3D G3DSA:1.20.1050.10 95 214 1.2E-20 T 28-03-2018 CJD35_RS03645 53c38271dff7ebdf34bf3483a18b80fe 223 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 3.2E-20 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS03645 53c38271dff7ebdf34bf3483a18b80fe 223 SUPERFAMILY SSF47616 77 218 2.51E-25 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS01730 694bd5d4d9072c6b73be59f4f0389151 227 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 227 44.612 T 28-03-2018 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 CJD35_RS01730 694bd5d4d9072c6b73be59f4f0389151 227 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 176 3.4E-13 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CJD35_RS01730 694bd5d4d9072c6b73be59f4f0389151 227 SMART SM00702 1 177 3.7E-17 T 28-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CJD35_RS01730 694bd5d4d9072c6b73be59f4f0389151 227 SUPERFAMILY SSF51197 4 178 8.38E-5 T 28-03-2018 CJD35_RS01730 694bd5d4d9072c6b73be59f4f0389151 227 Gene3D G3DSA:2.60.120.620 2 187 2.4E-30 T 28-03-2018 CJD35_RS14040 011e7686e78770005374cb11c6a4b127 687 Gene3D G3DSA:2.40.50.140 53 147 2.5E-5 T 28-03-2018 CJD35_RS14040 011e7686e78770005374cb11c6a4b127 687 SMART SM00487 255 446 1.0E-29 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS14040 011e7686e78770005374cb11c6a4b127 687 Gene3D G3DSA:3.40.50.300 249 443 1.3E-35 T 28-03-2018 CJD35_RS14040 011e7686e78770005374cb11c6a4b127 687 Gene3D G3DSA:3.40.50.300 444 615 7.8E-27 T 28-03-2018 CJD35_RS14040 011e7686e78770005374cb11c6a4b127 687 SUPERFAMILY SSF52540 371 630 2.46E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14040 011e7686e78770005374cb11c6a4b127 687 Pfam PF00271 Helicase conserved C-terminal domain 462 573 3.2E-16 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS14040 011e7686e78770005374cb11c6a4b127 687 SUPERFAMILY SSF52540 192 440 1.12E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14040 011e7686e78770005374cb11c6a4b127 687 Pfam PF00270 DEAD/DEAH box helicase 283 420 7.3E-17 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJD35_RS14040 011e7686e78770005374cb11c6a4b127 687 SMART SM00490 491 574 1.0E-19 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS14040 011e7686e78770005374cb11c6a4b127 687 SUPERFAMILY SSF50249 7 177 4.28E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 Gene3D G3DSA:2.40.110.10 118 214 1.5E-35 T 28-03-2018 CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 333 352 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 SUPERFAMILY SSF56645 2 238 1.3E-70 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 121 133 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 Gene3D G3DSA:1.20.140.10 215 374 1.2E-61 T 28-03-2018 CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 PIRSF PIRSF016578 124 374 1.5E-16 T 28-03-2018 CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 PIRSF PIRSF016578 3 98 4.4E-6 T 28-03-2018 CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 Gene3D G3DSA:1.10.540.10 1 117 6.9E-32 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 119 214 1.2E-25 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 374 7.2E-51 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 3 114 4.3E-28 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS17630 70c319fa4d07b08428d65615990da8c6 374 SUPERFAMILY SSF47203 224 374 1.93E-57 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS12065 a863bc0794124bf99d4b87bfecea4935 609 SUPERFAMILY SSF111369 384 550 1.19E-12 T 28-03-2018 CJD35_RS12065 a863bc0794124bf99d4b87bfecea4935 609 Gene3D G3DSA:3.30.450.40 142 318 1.7E-12 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS12065 a863bc0794124bf99d4b87bfecea4935 609 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 368 575 3.2E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJD35_RS12065 a863bc0794124bf99d4b87bfecea4935 609 Pfam PF01590 GAF domain 185 308 4.2E-5 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS12065 a863bc0794124bf99d4b87bfecea4935 609 Gene3D G3DSA:3.30.450.40 11 131 7.9E-5 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS12065 a863bc0794124bf99d4b87bfecea4935 609 Gene3D G3DSA:1.20.1600.10 454 567 8.9E-7 T 28-03-2018 CJD35_RS12065 a863bc0794124bf99d4b87bfecea4935 609 Gene3D G3DSA:2.40.50.100 380 453 2.0E-8 T 28-03-2018 CJD35_RS12065 a863bc0794124bf99d4b87bfecea4935 609 SUPERFAMILY SSF55781 174 317 2.51E-8 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS00945 1cdb938419199a47118749d1520d1def 356 Gene3D G3DSA:3.40.50.20 8 92 1.0E-22 T 28-03-2018 CJD35_RS00945 1cdb938419199a47118749d1520d1def 356 Gene3D G3DSA:3.30.470.20 184 354 1.1E-33 T 28-03-2018 CJD35_RS00945 1cdb938419199a47118749d1520d1def 356 SUPERFAMILY SSF52440 4 102 8.78E-25 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CJD35_RS00945 1cdb938419199a47118749d1520d1def 356 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 9 352 7.5E-104 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CJD35_RS00945 1cdb938419199a47118749d1520d1def 356 Gene3D G3DSA:3.30.1490.20 120 182 1.9E-15 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS00945 1cdb938419199a47118749d1520d1def 356 SUPERFAMILY SSF56059 105 303 3.16E-58 T 28-03-2018 CJD35_RS00945 1cdb938419199a47118749d1520d1def 356 Pfam PF02222 ATP-grasp domain 119 283 7.9E-45 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CJD35_RS00945 1cdb938419199a47118749d1520d1def 356 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 9 356 39.109 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CJD35_RS00945 1cdb938419199a47118749d1520d1def 356 SUPERFAMILY SSF51246 310 354 4.47E-13 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CJD35_RS11655 c2fde077f96faae780c5f81dc6327964 469 Pfam PF14403 Circularly permuted ATP-grasp type 2 69 445 9.1E-154 T 28-03-2018 IPR025841 Circularly permuted ATP-grasp type 2 CJD35_RS11655 c2fde077f96faae780c5f81dc6327964 469 SUPERFAMILY SSF56059 12 207 2.29E-62 T 28-03-2018 CJD35_RS11655 c2fde077f96faae780c5f81dc6327964 469 SUPERFAMILY SSF56059 315 460 2.29E-62 T 28-03-2018 CJD35_RS11655 c2fde077f96faae780c5f81dc6327964 469 PIRSF PIRSF005522 2 469 1.1E-210 T 28-03-2018 IPR016450 Uncharacterised conserved protein UCP005522 CJD35_RS11655 c2fde077f96faae780c5f81dc6327964 469 Gene3D G3DSA:3.30.470.20 331 461 1.9E-5 T 28-03-2018 CJD35_RS12740 112197cc4bd2317250d3699b2cdd50c6 148 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 145 28.173 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CJD35_RS12740 112197cc4bd2317250d3699b2cdd50c6 148 Pfam PF03100 CcmE 4 129 1.5E-41 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CJD35_RS12740 112197cc4bd2317250d3699b2cdd50c6 148 SUPERFAMILY SSF82093 29 133 1.96E-35 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CJD35_RS12740 112197cc4bd2317250d3699b2cdd50c6 148 Gene3D G3DSA:2.40.50.140 26 124 4.7E-30 T 28-03-2018 CJD35_RS20215 bf46a4e2f33e794b0888ac15120fb807 403 Pfam PF01935 Domain of unknown function DUF87 18 119 7.8E-10 T 28-03-2018 IPR002789 Helicase HerA, central domain CJD35_RS20215 bf46a4e2f33e794b0888ac15120fb807 403 SUPERFAMILY SSF52540 10 257 5.85E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20215 bf46a4e2f33e794b0888ac15120fb807 403 Gene3D G3DSA:3.40.50.300 17 318 7.3E-13 T 28-03-2018 CJD35_RS00675 aafd6aa24fa40feadb91a6d40ea4e9c8 318 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS00675 aafd6aa24fa40feadb91a6d40ea4e9c8 318 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 316 3.7E-101 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS00675 aafd6aa24fa40feadb91a6d40ea4e9c8 318 Gene3D G3DSA:3.10.290.10 5 78 2.5E-17 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS00675 aafd6aa24fa40feadb91a6d40ea4e9c8 318 Pfam PF00849 RNA pseudouridylate synthase 94 251 5.7E-35 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS00675 aafd6aa24fa40feadb91a6d40ea4e9c8 318 Gene3D G3DSA:3.30.2350.10 85 318 8.4E-74 T 28-03-2018 CJD35_RS00675 aafd6aa24fa40feadb91a6d40ea4e9c8 318 SUPERFAMILY SSF55174 18 107 1.85E-7 T 28-03-2018 CJD35_RS00675 aafd6aa24fa40feadb91a6d40ea4e9c8 318 SUPERFAMILY SSF55120 80 316 1.67E-76 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS08880 4ad750c341802f0254c4c9efc3ed62e9 193 SUPERFAMILY SSF50891 21 169 4.24E-29 T 28-03-2018 IPR029000 Cyclophilin-like domain CJD35_RS08880 4ad750c341802f0254c4c9efc3ed62e9 193 Gene3D G3DSA:2.40.100.10 17 192 8.5E-28 T 28-03-2018 IPR029000 Cyclophilin-like domain CJD35_RS08880 4ad750c341802f0254c4c9efc3ed62e9 193 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 25 168 2.9E-27 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS19175 9d83d975c864b060932d62471b928919 720 SUPERFAMILY SSF109709 107 191 1.29E-17 T 28-03-2018 CJD35_RS19175 9d83d975c864b060932d62471b928919 720 Pfam PF02195 ParB-like nuclease domain 4 88 3.6E-11 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS19175 9d83d975c864b060932d62471b928919 720 Gene3D G3DSA:3.90.1530.10 1 106 1.2E-13 T 28-03-2018 CJD35_RS19175 9d83d975c864b060932d62471b928919 720 Gene3D G3DSA:1.10.10.730 107 150 4.1E-5 T 28-03-2018 CJD35_RS19175 9d83d975c864b060932d62471b928919 720 SUPERFAMILY SSF110849 5 73 4.19E-10 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS19175 9d83d975c864b060932d62471b928919 720 SMART SM00470 3 98 2.9E-7 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS09935 3e2e69e677896a7be253f0644e9f6e90 236 Gene3D G3DSA:2.70.70.10 62 212 7.2E-46 T 28-03-2018 CJD35_RS09935 3e2e69e677896a7be253f0644e9f6e90 236 SUPERFAMILY SSF51261 78 206 3.09E-56 T 28-03-2018 IPR011055 Duplicated hybrid motif CJD35_RS09935 3e2e69e677896a7be253f0644e9f6e90 236 Pfam PF01551 Peptidase family M23 108 203 2.7E-34 T 28-03-2018 IPR016047 Peptidase M23 CJD35_RS07490 83f9c8ba4a04c959e6453f8c3d1fd28e 112 Pfam PF04480 Protein of unknown function (DUF559) 1 98 9.7E-30 T 28-03-2018 IPR007569 Domain of unknown function DUF559 CJD35_RS07490 83f9c8ba4a04c959e6453f8c3d1fd28e 112 Gene3D G3DSA:3.40.960.10 5 105 4.5E-23 T 28-03-2018 CJD35_RS07490 83f9c8ba4a04c959e6453f8c3d1fd28e 112 SUPERFAMILY SSF52980 2 103 3.81E-15 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 Gene3D G3DSA:3.40.50.620 21 154 2.8E-31 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 PRINTS PR00147 DNA photolyase signature 166 182 1.4E-22 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 PRINTS PR00147 DNA photolyase signature 365 383 1.4E-22 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 PRINTS PR00147 DNA photolyase signature 345 361 1.4E-22 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 PRINTS PR00147 DNA photolyase signature 404 418 1.4E-22 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 SUPERFAMILY SSF48173 218 488 3.4E-93 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 SUPERFAMILY SSF52425 34 233 7.33E-53 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 Gene3D G3DSA:1.10.579.10 313 489 8.6E-65 T 28-03-2018 CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 365 384 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 Gene3D G3DSA:1.25.40.80 155 312 1.3E-36 T 28-03-2018 CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 Pfam PF00875 DNA photolyase 36 192 4.3E-45 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 Pfam PF03441 FAD binding domain of DNA photolyase 293 485 7.8E-71 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CJD35_RS12710 d3a5b4979e2bf79b0ed76126d6fa6fe2 489 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 345 357 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CJD35_RS14965 0523bb8fca9048ea4b0c36bd2a92947b 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 37 117 7.7E-20 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CJD35_RS14965 0523bb8fca9048ea4b0c36bd2a92947b 129 SUPERFAMILY SSF69118 2 125 1.22E-33 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CJD35_RS14965 0523bb8fca9048ea4b0c36bd2a92947b 129 Gene3D G3DSA:1.20.1290.10 12 129 2.1E-35 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CJD35_RS16280 814ca11b6ce042a7805dd13c31e7cf76 797 Pfam PF07715 TonB-dependent Receptor Plug Domain 59 169 3.5E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS16280 814ca11b6ce042a7805dd13c31e7cf76 797 Gene3D G3DSA:2.170.130.10 36 179 5.8E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS16280 814ca11b6ce042a7805dd13c31e7cf76 797 SUPERFAMILY SSF56935 255 307 6.41E-111 T 28-03-2018 CJD35_RS16280 814ca11b6ce042a7805dd13c31e7cf76 797 SUPERFAMILY SSF56935 38 227 6.41E-111 T 28-03-2018 CJD35_RS16280 814ca11b6ce042a7805dd13c31e7cf76 797 SUPERFAMILY SSF56935 346 797 6.41E-111 T 28-03-2018 CJD35_RS16280 814ca11b6ce042a7805dd13c31e7cf76 797 Pfam PF00593 TonB dependent receptor 326 793 1.0E-46 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS16280 814ca11b6ce042a7805dd13c31e7cf76 797 Gene3D G3DSA:2.40.170.20 180 797 3.4E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS09255 dcde123bc699b772d546645224a6b339 122 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 28-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS09255 dcde123bc699b772d546645224a6b339 122 Pfam PF01245 Ribosomal protein L19 2 115 6.9E-47 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09255 dcde123bc699b772d546645224a6b339 122 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 1 115 6.4E-47 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09255 dcde123bc699b772d546645224a6b339 122 PRINTS PR00061 Ribosomal protein L19 signature 6 35 8.6E-37 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09255 dcde123bc699b772d546645224a6b339 122 PRINTS PR00061 Ribosomal protein L19 signature 36 65 8.6E-37 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09255 dcde123bc699b772d546645224a6b339 122 PRINTS PR00061 Ribosomal protein L19 signature 90 115 8.6E-37 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09255 dcde123bc699b772d546645224a6b339 122 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 116 29.614 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09255 dcde123bc699b772d546645224a6b339 122 PIRSF PIRSF002191 1 121 5.3E-52 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09255 dcde123bc699b772d546645224a6b339 122 SUPERFAMILY SSF50104 1 117 1.6E-45 T 28-03-2018 IPR008991 Translation protein SH3-like domain CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 SUPERFAMILY SSF52540 216 354 2.12E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 Pfam PF10396 GTP-binding protein TrmE N-terminus 4 119 2.1E-33 T 28-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 SUPERFAMILY SSF103025 3 119 4.24E-33 T 28-03-2018 CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 Gene3D G3DSA:1.20.120.430 121 279 1.1E-21 T 28-03-2018 CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 217 323 8.6E-15 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 Pfam PF12631 MnmE helical domain 122 424 8.1E-38 T 28-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 SUPERFAMILY SSF116878 120 220 9.42E-35 T 28-03-2018 CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 SUPERFAMILY SSF116878 356 427 9.42E-35 T 28-03-2018 CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 3 427 28.779 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 Pfam PF01926 50S ribosome-binding GTPase 218 308 2.9E-19 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 Gene3D G3DSA:1.20.120.430 280 427 2.5E-15 T 28-03-2018 CJD35_RS05855 aa7f5e1440aba54564e22ebab67d73d1 427 Gene3D G3DSA:3.30.1360.120 1 120 9.3E-38 T 28-03-2018 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 247 3.1E-32 T 28-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 SUPERFAMILY SSF55979 1 117 4.71E-26 T 28-03-2018 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 PIRSF PIRSF000804 1 370 6.4E-118 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 SUPERFAMILY SSF55979 127 248 1.22E-26 T 28-03-2018 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 Gene3D G3DSA:3.10.150.10 124 251 7.6E-32 T 28-03-2018 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 SMART SM00480 17 366 1.3E-124 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 2.4E-33 T 28-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 SUPERFAMILY SSF55979 250 370 7.54E-34 T 28-03-2018 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 Gene3D G3DSA:3.10.150.10 1 122 2.0E-27 T 28-03-2018 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 Gene3D G3DSA:3.10.150.10 252 370 2.7E-27 T 28-03-2018 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 250 369 1.7E-30 T 28-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS04160 2a3d939f7466537b79380d956dbc29e2 370 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 369 1.4E-92 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS04290 0f9e46dfeb238889c3536b1fcb034c98 301 SUPERFAMILY SSF48179 175 285 5.1E-35 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS04290 0f9e46dfeb238889c3536b1fcb034c98 301 Gene3D G3DSA:1.10.3660.10 183 300 1.5E-35 T 28-03-2018 CJD35_RS04290 0f9e46dfeb238889c3536b1fcb034c98 301 SUPERFAMILY SSF51735 6 171 2.84E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS04290 0f9e46dfeb238889c3536b1fcb034c98 301 Pfam PF02153 Prephenate dehydrogenase 19 275 4.7E-76 T 28-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CJD35_RS04290 0f9e46dfeb238889c3536b1fcb034c98 301 Gene3D G3DSA:3.40.50.720 4 173 5.6E-31 T 28-03-2018 CJD35_RS09370 6f8c6d2a81ed36d394d2e1881738aa27 97 SUPERFAMILY SSF143800 1 85 7.85E-28 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09370 6f8c6d2a81ed36d394d2e1881738aa27 97 Pfam PF00830 Ribosomal L28 family 3 61 6.3E-25 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09370 6f8c6d2a81ed36d394d2e1881738aa27 97 Gene3D G3DSA:2.30.170.40 2 76 7.4E-29 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09370 6f8c6d2a81ed36d394d2e1881738aa27 97 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.6E-24 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS09370 6f8c6d2a81ed36d394d2e1881738aa27 97 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 68 18.965 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 Gene3D G3DSA:2.40.30.10 188 267 8.1E-23 T 28-03-2018 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 Gene3D G3DSA:3.50.50.60 2 183 4.8E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 SUPERFAMILY SSF51905 333 390 2.4E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 SUPERFAMILY SSF51905 2 188 2.4E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.0E-6 T 28-03-2018 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 3.0E-6 T 28-03-2018 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 343 365 3.0E-6 T 28-03-2018 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 Pfam PF03486 HI0933-like protein 5 388 2.5E-136 T 28-03-2018 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 SUPERFAMILY SSF160996 189 336 3.53E-40 T 28-03-2018 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 388 4.2E-117 T 28-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 Gene3D G3DSA:1.10.8.260 268 318 2.1E-17 T 28-03-2018 IPR023166 HI0933 insert-like domain CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.3E-8 T 28-03-2018 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 358 365 6.3E-8 T 28-03-2018 CJD35_RS00880 09a1844616d24e118324118c99d62e0e 390 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 6.3E-8 T 28-03-2018 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 558 570 - T 28-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 Pfam PF00311 Phosphoenolpyruvate carboxylase 131 900 1.3E-250 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 5 900 17.434 T 28-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 Gene3D G3DSA:1.20.1440.90 267 392 1.1E-23 T 28-03-2018 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 28-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 SUPERFAMILY SSF51621 18 900 1.11E-267 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 733 759 3.8E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 238 253 3.8E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 556 576 3.8E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 598 627 3.8E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 390 410 3.8E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CJD35_RS03410 69f4f9467325de5698bf77960fa45b9c 900 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 3.8E-53 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CJD35_RS17430 575dad11e2f6cec2e4968c9c93abd22c 110 Pfam PF00576 HIUase/Transthyretin family 5 109 7.6E-31 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CJD35_RS17430 575dad11e2f6cec2e4968c9c93abd22c 110 SUPERFAMILY SSF49472 2 110 2.75E-36 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CJD35_RS17430 575dad11e2f6cec2e4968c9c93abd22c 110 Gene3D G3DSA:2.60.40.180 1 110 1.6E-34 T 28-03-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CJD35_RS17430 575dad11e2f6cec2e4968c9c93abd22c 110 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 3 110 5.0E-32 T 28-03-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 CJD35_RS17430 575dad11e2f6cec2e4968c9c93abd22c 110 ProSitePatterns PS00769 Transthyretin signature 2. 93 105 - T 28-03-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 CJD35_RS06885 3f945daf0ce22c63bd3694f9c4f32a57 332 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 203 327 5.7E-25 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS06885 3f945daf0ce22c63bd3694f9c4f32a57 332 Gene3D G3DSA:1.10.540.10 1 116 1.1E-18 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS06885 3f945daf0ce22c63bd3694f9c4f32a57 332 SUPERFAMILY SSF56645 1 180 2.09E-23 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS06885 3f945daf0ce22c63bd3694f9c4f32a57 332 Gene3D G3DSA:1.20.140.10 195 318 1.3E-31 T 28-03-2018 CJD35_RS06885 3f945daf0ce22c63bd3694f9c4f32a57 332 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 103 1.6E-15 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS06885 3f945daf0ce22c63bd3694f9c4f32a57 332 SUPERFAMILY SSF47203 203 328 4.67E-32 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS16790 5d3f053e3f3829198a82e0929c58605f 656 Gene3D G3DSA:3.20.20.450 392 648 5.4E-85 T 28-03-2018 IPR001633 EAL domain CJD35_RS16790 5d3f053e3f3829198a82e0929c58605f 656 SUPERFAMILY SSF55073 228 384 2.12E-38 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS16790 5d3f053e3f3829198a82e0929c58605f 656 Pfam PF00563 EAL domain 399 629 3.9E-67 T 28-03-2018 IPR001633 EAL domain CJD35_RS16790 5d3f053e3f3829198a82e0929c58605f 656 Gene3D G3DSA:3.30.70.270 221 391 2.4E-48 T 28-03-2018 CJD35_RS16790 5d3f053e3f3829198a82e0929c58605f 656 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 221 382 4.4E-32 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS16790 5d3f053e3f3829198a82e0929c58605f 656 SMART SM00267 212 383 9.6E-43 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS16790 5d3f053e3f3829198a82e0929c58605f 656 SMART SM00052 393 634 6.3E-93 T 28-03-2018 IPR001633 EAL domain CJD35_RS16790 5d3f053e3f3829198a82e0929c58605f 656 SUPERFAMILY SSF141868 399 640 2.75E-77 T 28-03-2018 IPR001633 EAL domain CJD35_RS16790 5d3f053e3f3829198a82e0929c58605f 656 Pfam PF00990 Diguanylate cyclase, GGDEF domain 223 377 4.3E-32 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS13815 beb726537a446510c4f7548576557aeb 199 Pfam PF00293 NUDIX domain 40 151 4.0E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CJD35_RS13815 beb726537a446510c4f7548576557aeb 199 SUPERFAMILY SSF55811 38 189 7.72E-34 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJD35_RS13815 beb726537a446510c4f7548576557aeb 199 Gene3D G3DSA:3.90.79.10 22 196 3.5E-40 T 28-03-2018 CJD35_RS06865 edfb56afe46bc72f6cae0326763ff3a2 961 Pfam PF07715 TonB-dependent Receptor Plug Domain 63 177 1.2E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS06865 edfb56afe46bc72f6cae0326763ff3a2 961 Pfam PF00593 TonB dependent receptor 419 960 5.3E-40 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS06865 edfb56afe46bc72f6cae0326763ff3a2 961 Gene3D G3DSA:2.170.130.10 39 184 9.0E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS06865 edfb56afe46bc72f6cae0326763ff3a2 961 SUPERFAMILY SSF56935 414 451 3.87E-85 T 28-03-2018 CJD35_RS06865 edfb56afe46bc72f6cae0326763ff3a2 961 SUPERFAMILY SSF56935 507 554 3.87E-85 T 28-03-2018 CJD35_RS06865 edfb56afe46bc72f6cae0326763ff3a2 961 SUPERFAMILY SSF56935 582 737 3.87E-85 T 28-03-2018 CJD35_RS06865 edfb56afe46bc72f6cae0326763ff3a2 961 SUPERFAMILY SSF56935 49 243 3.87E-85 T 28-03-2018 CJD35_RS06865 edfb56afe46bc72f6cae0326763ff3a2 961 SUPERFAMILY SSF56935 327 378 3.87E-85 T 28-03-2018 CJD35_RS06865 edfb56afe46bc72f6cae0326763ff3a2 961 SUPERFAMILY SSF56935 774 961 3.87E-85 T 28-03-2018 CJD35_RS06865 edfb56afe46bc72f6cae0326763ff3a2 961 Gene3D G3DSA:2.40.170.20 192 961 1.1E-68 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07440 6a62691ac9b4fa6e2b9b772124caa208 621 Gene3D G3DSA:3.40.50.300 1 283 1.8E-54 T 28-03-2018 CJD35_RS07440 6a62691ac9b4fa6e2b9b772124caa208 621 SUPERFAMILY SSF52540 292 510 4.62E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS07440 6a62691ac9b4fa6e2b9b772124caa208 621 SMART SM00382 334 501 1.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS07440 6a62691ac9b4fa6e2b9b772124caa208 621 SMART SM00382 26 220 5.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS07440 6a62691ac9b4fa6e2b9b772124caa208 621 SUPERFAMILY SSF52540 2 245 2.99E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS07440 6a62691ac9b4fa6e2b9b772124caa208 621 Pfam PF00005 ABC transporter 17 175 6.1E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS07440 6a62691ac9b4fa6e2b9b772124caa208 621 Pfam PF00005 ABC transporter 325 456 4.4E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS07440 6a62691ac9b4fa6e2b9b772124caa208 621 Gene3D G3DSA:3.40.50.300 284 549 5.6E-46 T 28-03-2018 CJD35_RS07440 6a62691ac9b4fa6e2b9b772124caa208 621 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS07440 6a62691ac9b4fa6e2b9b772124caa208 621 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS07440 6a62691ac9b4fa6e2b9b772124caa208 621 Pfam PF12848 ABC transporter 214 295 3.4E-24 T 28-03-2018 IPR032781 ABC-transporter extension domain CJD35_RS10460 335129001ff6bc5612984488376d2196 304 SUPERFAMILY SSF56194 198 302 7.06E-36 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10460 335129001ff6bc5612984488376d2196 304 Gene3D G3DSA:3.30.465.10 94 217 1.5E-32 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJD35_RS10460 335129001ff6bc5612984488376d2196 304 Pfam PF01565 FAD binding domain 40 167 2.8E-19 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CJD35_RS10460 335129001ff6bc5612984488376d2196 304 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 29 300 3.3E-57 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10460 335129001ff6bc5612984488376d2196 304 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 202 300 6.4E-29 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10460 335129001ff6bc5612984488376d2196 304 Gene3D G3DSA:3.30.43.10 12 86 4.7E-20 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CJD35_RS10460 335129001ff6bc5612984488376d2196 304 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 304 89.844 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10460 335129001ff6bc5612984488376d2196 304 SUPERFAMILY SSF56176 25 209 1.2E-40 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJD35_RS10460 335129001ff6bc5612984488376d2196 304 Gene3D G3DSA:3.90.78.10 218 304 5.5E-27 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 Gene3D G3DSA:3.20.20.450 549 803 1.3E-96 T 28-03-2018 IPR001633 EAL domain CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 Pfam PF03707 Bacterial signalling protein N terminal repeat 58 115 6.4E-12 T 28-03-2018 IPR005330 MHYT domain CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 Pfam PF03707 Bacterial signalling protein N terminal repeat 120 177 2.4E-10 T 28-03-2018 IPR005330 MHYT domain CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 Pfam PF00563 EAL domain 565 796 6.7E-69 T 28-03-2018 IPR001633 EAL domain CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 Gene3D G3DSA:3.30.70.270 382 548 9.5E-52 T 28-03-2018 CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 Pfam PF00990 Diguanylate cyclase, GGDEF domain 389 541 5.0E-40 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 386 545 4.5E-40 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 SMART SM00267 378 549 7.1E-48 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 SMART SM00052 559 801 3.8E-100 T 28-03-2018 IPR001633 EAL domain CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 Pfam PF12860 PAS fold 267 383 4.9E-29 T 28-03-2018 CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 SUPERFAMILY SSF55785 251 376 1.26E-8 T 28-03-2018 IPR000014 PAS domain CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 SUPERFAMILY SSF141868 566 803 1.7E-85 T 28-03-2018 IPR001633 EAL domain CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 SUPERFAMILY SSF55073 394 551 1.18E-41 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 Gene3D G3DSA:3.30.450.20 243 381 5.3E-17 T 28-03-2018 CJD35_RS18865 3eabfd46daf187e2a0d0793cb4affc0c 813 SMART SM00091 261 330 1.9E-6 T 28-03-2018 IPR000014 PAS domain CJD35_RS11085 fd7ad8f79393d65d20e6f28208327f26 74 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 22 74 8.0E-23 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11085 fd7ad8f79393d65d20e6f28208327f26 74 ProSitePatterns PS00057 Ribosomal protein S18 signature. 22 45 - T 28-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11085 fd7ad8f79393d65d20e6f28208327f26 74 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 3 74 21.26 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11085 fd7ad8f79393d65d20e6f28208327f26 74 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 1.7E-17 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11085 fd7ad8f79393d65d20e6f28208327f26 74 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 1.7E-17 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11085 fd7ad8f79393d65d20e6f28208327f26 74 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 1.7E-17 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11085 fd7ad8f79393d65d20e6f28208327f26 74 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 1.7E-17 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11085 fd7ad8f79393d65d20e6f28208327f26 74 TIGRFAM TIGR00165 S18: ribosomal protein bS18 5 73 1.0E-29 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11085 fd7ad8f79393d65d20e6f28208327f26 74 SUPERFAMILY SSF46911 3 74 2.09E-27 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11085 fd7ad8f79393d65d20e6f28208327f26 74 Gene3D G3DSA:4.10.640.10 1 74 5.5E-30 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11085 fd7ad8f79393d65d20e6f28208327f26 74 Pfam PF01084 Ribosomal protein S18 21 69 4.2E-25 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS04415 b0f730dda19da86fc9597b217c9566c3 377 Gene3D G3DSA:3.40.630.30 11 185 6.7E-9 T 28-03-2018 CJD35_RS04415 b0f730dda19da86fc9597b217c9566c3 377 Gene3D G3DSA:3.40.630.30 186 353 1.8E-37 T 28-03-2018 CJD35_RS04415 b0f730dda19da86fc9597b217c9566c3 377 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 12 375 7.2E-150 T 28-03-2018 IPR007434 Peptidogalycan biosysnthesis/recognition CJD35_RS04415 b0f730dda19da86fc9597b217c9566c3 377 SUPERFAMILY SSF55729 178 341 4.24E-41 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS01360 81748b17a2ce104e1c28f1f0de50b671 239 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 72 211 2.9E-43 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS01360 81748b17a2ce104e1c28f1f0de50b671 239 Gene3D G3DSA:2.40.100.10 56 226 2.3E-49 T 28-03-2018 IPR029000 Cyclophilin-like domain CJD35_RS01360 81748b17a2ce104e1c28f1f0de50b671 239 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 106 123 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CJD35_RS01360 81748b17a2ce104e1c28f1f0de50b671 239 SUPERFAMILY SSF50891 77 220 5.55E-47 T 28-03-2018 IPR029000 Cyclophilin-like domain CJD35_RS01360 81748b17a2ce104e1c28f1f0de50b671 239 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 111 123 2.3E-14 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS01360 81748b17a2ce104e1c28f1f0de50b671 239 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 2.3E-14 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS01360 81748b17a2ce104e1c28f1f0de50b671 239 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 166 178 2.3E-14 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS01360 81748b17a2ce104e1c28f1f0de50b671 239 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 179 194 2.3E-14 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS18145 78e59d8a1f2d153d643e395f76cdb5ca 93 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 35 86 1.1E-18 T 28-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 CJD35_RS21265 78e59d8a1f2d153d643e395f76cdb5ca 93 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 35 86 1.1E-18 T 28-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 CJD35_RS09230 6e92ea9a4072c860bbec1f8b914b98c1 164 Gene3D G3DSA:2.30.30.240 90 159 5.5E-10 T 28-03-2018 CJD35_RS09230 6e92ea9a4072c860bbec1f8b914b98c1 164 Pfam PF01782 RimM N-terminal domain 8 85 4.3E-17 T 28-03-2018 IPR002676 RimM protein GO:0006364 CJD35_RS09230 6e92ea9a4072c860bbec1f8b914b98c1 164 Pfam PF05239 PRC-barrel domain 91 160 1.7E-5 T 28-03-2018 IPR027275 PRC-barrel domain CJD35_RS09230 6e92ea9a4072c860bbec1f8b914b98c1 164 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 164 17.296 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CJD35_RS09230 6e92ea9a4072c860bbec1f8b914b98c1 164 SUPERFAMILY SSF50346 94 148 1.2E-8 T 28-03-2018 IPR011033 PRC-barrel-like CJD35_RS09230 6e92ea9a4072c860bbec1f8b914b98c1 164 Gene3D G3DSA:2.40.30.60 5 88 4.1E-17 T 28-03-2018 IPR002676 RimM protein GO:0006364 CJD35_RS09230 6e92ea9a4072c860bbec1f8b914b98c1 164 SUPERFAMILY SSF50447 5 88 4.24E-15 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CJD35_RS09230 6e92ea9a4072c860bbec1f8b914b98c1 164 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 6 147 1.4E-29 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 PRINTS PR00067 Catalase signature 104 121 2.4E-71 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 PRINTS PR00067 Catalase signature 83 101 2.4E-71 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 PRINTS PR00067 Catalase signature 288 315 2.4E-71 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 PRINTS PR00067 Catalase signature 123 141 2.4E-71 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 PRINTS PR00067 Catalase signature 320 346 2.4E-71 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 PRINTS PR00067 Catalase signature 21 44 2.4E-71 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 PIRSF PIRSF038928 1 482 9.9E-217 T 28-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 SMART SM01060 8 392 1.4E-281 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 Pfam PF00199 Catalase 8 389 1.0E-184 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 Pfam PF06628 Catalase-related immune-responsive 416 475 6.9E-19 T 28-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 333 341 - T 28-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 Gene3D G3DSA:2.40.180.10 1 357 5.9E-159 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02530 1426d526a4b6aa2e8a408391178b491a 499 SUPERFAMILY SSF56634 3 475 4.58E-207 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS05685 3833f010eb89b7dd4f0e0133566f7a9c 233 Gene3D G3DSA:3.30.420.10 2 169 4.7E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS05685 3833f010eb89b7dd4f0e0133566f7a9c 233 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 223 8.0E-79 T 28-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS05685 3833f010eb89b7dd4f0e0133566f7a9c 233 SUPERFAMILY SSF53098 1 168 1.12E-50 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS05685 3833f010eb89b7dd4f0e0133566f7a9c 233 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 170 9.3E-43 T 28-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CJD35_RS05685 3833f010eb89b7dd4f0e0133566f7a9c 233 SMART SM00479 2 172 2.5E-40 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CJD35_RS05685 3833f010eb89b7dd4f0e0133566f7a9c 233 Pfam PF00929 Exonuclease 4 163 4.1E-33 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CJD35_RS02545 53d1ea78d33ed8753265d96aeed2d527 579 Pfam PF00561 alpha/beta hydrolase fold 283 499 3.3E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS02545 53d1ea78d33ed8753265d96aeed2d527 579 Gene3D G3DSA:3.40.50.1820 213 547 8.3E-17 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS02545 53d1ea78d33ed8753265d96aeed2d527 579 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 46 577 2.5E-196 T 28-03-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 CJD35_RS02545 53d1ea78d33ed8753265d96aeed2d527 579 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 91 259 1.6E-65 T 28-03-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 CJD35_RS02545 53d1ea78d33ed8753265d96aeed2d527 579 SUPERFAMILY SSF53474 219 510 9.41E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS15960 6b5de20aa4855e3a6414f4ce0f67b4bc 496 Pfam PF00171 Aldehyde dehydrogenase family 17 490 1.2E-145 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS15960 6b5de20aa4855e3a6414f4ce0f67b4bc 496 Gene3D G3DSA:3.40.309.10 281 476 8.3E-59 T 28-03-2018 CJD35_RS15960 6b5de20aa4855e3a6414f4ce0f67b4bc 496 SUPERFAMILY SSF53720 5 493 3.01E-142 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS15960 6b5de20aa4855e3a6414f4ce0f67b4bc 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 264 271 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS15960 6b5de20aa4855e3a6414f4ce0f67b4bc 496 Gene3D G3DSA:3.40.605.10 3 280 8.7E-82 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS06955 f9ee86649046e74f964ffaaea7efc1b6 260 Gene3D G3DSA:1.10.12.10 220 260 8.1E-10 T 28-03-2018 IPR014748 Crontonase, C-terminal CJD35_RS06955 f9ee86649046e74f964ffaaea7efc1b6 260 Gene3D G3DSA:3.90.226.10 5 219 1.3E-60 T 28-03-2018 CJD35_RS06955 f9ee86649046e74f964ffaaea7efc1b6 260 SUPERFAMILY SSF52096 2 259 2.2E-73 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS06955 f9ee86649046e74f964ffaaea7efc1b6 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 259 1.0E-53 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS03125 23941e815c08b5974f3432fe62c88f4e 442 SUPERFAMILY SSF52540 98 365 3.62E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03125 23941e815c08b5974f3432fe62c88f4e 442 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 351 360 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS03125 23941e815c08b5974f3432fe62c88f4e 442 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 360 3.9E-66 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS03125 23941e815c08b5974f3432fe62c88f4e 442 Gene3D G3DSA:3.40.50.300 96 367 5.4E-79 T 28-03-2018 CJD35_RS03125 23941e815c08b5974f3432fe62c88f4e 442 SMART SM00382 162 344 9.3E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS03125 23941e815c08b5974f3432fe62c88f4e 442 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 18 437 1.2E-144 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS14720 c15711f9c22c7ac08d1240130c605292 292 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 73 279 8.5E-63 T 28-03-2018 CJD35_RS14720 c15711f9c22c7ac08d1240130c605292 292 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 79 248 3.0E-30 T 28-03-2018 CJD35_RS14720 c15711f9c22c7ac08d1240130c605292 292 SUPERFAMILY SSF56784 75 281 3.86E-44 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS14720 c15711f9c22c7ac08d1240130c605292 292 Gene3D G3DSA:1.10.150.210 102 136 8.0E-24 T 28-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 CJD35_RS14720 c15711f9c22c7ac08d1240130c605292 292 Pfam PF12710 haloacid dehalogenase-like hydrolase 80 247 2.0E-18 T 28-03-2018 CJD35_RS14720 c15711f9c22c7ac08d1240130c605292 292 Gene3D G3DSA:3.30.70.260 55 101 6.3E-4 T 28-03-2018 CJD35_RS14720 c15711f9c22c7ac08d1240130c605292 292 Gene3D G3DSA:3.40.50.1000 137 281 2.0E-21 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS02665 4500f2d83dda51b4e3d6d2f0ab241646 274 Pfam PF01609 Transposase DDE domain 115 263 2.3E-25 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS02665 4500f2d83dda51b4e3d6d2f0ab241646 274 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 24 97 1.2E-25 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family CJD35_RS07765 71e495c97cb1cf786e8a7333f574046c 280 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 11 228 33.113 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS07765 71e495c97cb1cf786e8a7333f574046c 280 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 88 99 - T 28-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS07765 71e495c97cb1cf786e8a7333f574046c 280 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 209 4.4E-28 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS07765 71e495c97cb1cf786e8a7333f574046c 280 Gene3D G3DSA:3.40.1010.10 9 118 1.8E-32 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS07765 71e495c97cb1cf786e8a7333f574046c 280 PIRSF PIRSF005917 1 280 4.4E-85 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS07765 71e495c97cb1cf786e8a7333f574046c 280 Gene3D G3DSA:3.30.950.10 119 231 9.4E-34 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS07765 71e495c97cb1cf786e8a7333f574046c 280 SUPERFAMILY SSF53790 11 226 9.29E-70 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS07765 71e495c97cb1cf786e8a7333f574046c 280 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 12 275 3.6E-65 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS18690 6d8b450a878ff9b88a12acb70162b7a4 107 Gene3D G3DSA:1.10.260.40 2 72 2.2E-7 T 28-03-2018 CJD35_RS18690 6d8b450a878ff9b88a12acb70162b7a4 107 SUPERFAMILY SSF47413 2 66 6.19E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS05630 d4b41da6ba650c40a899b71df73ef887 431 Gene3D G3DSA:2.40.160.60 25 431 1.8E-71 T 28-03-2018 CJD35_RS05630 d4b41da6ba650c40a899b71df73ef887 431 SUPERFAMILY SSF56935 25 431 4.94E-78 T 28-03-2018 CJD35_RS05630 d4b41da6ba650c40a899b71df73ef887 431 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 22 431 1.1E-87 T 28-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CJD35_RS14655 afed3c8d1a3a3c61214c95696451ef33 402 SUPERFAMILY SSF56601 24 380 2.11E-76 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS14655 afed3c8d1a3a3c61214c95696451ef33 402 Pfam PF00144 Beta-lactamase 30 384 2.6E-61 T 28-03-2018 IPR001466 Beta-lactamase-related CJD35_RS14655 afed3c8d1a3a3c61214c95696451ef33 402 Gene3D G3DSA:3.40.710.10 2 397 3.7E-77 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 SUPERFAMILY SSF81653 233 328 5.75E-20 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 Gene3D G3DSA:3.30.70.100 21 87 1.2E-16 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 430 436 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 148 707 4.5E-143 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 SUPERFAMILY SSF55008 16 86 3.53E-16 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 PRINTS PR00943 Copper-transporting ATPase signature 218 236 1.0E-5 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 PRINTS PR00943 Copper-transporting ATPase signature 351 365 1.0E-5 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 PRINTS PR00943 Copper-transporting ATPase signature 152 171 1.0E-5 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 PRINTS PR00943 Copper-transporting ATPase signature 581 598 1.0E-5 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 PRINTS PR00943 Copper-transporting ATPase signature 411 426 1.0E-5 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 604 623 7.5E-15 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 278 292 7.5E-15 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 562 7.5E-15 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 627 639 7.5E-15 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 428 442 7.5E-15 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 Pfam PF00702 haloacid dehalogenase-like hydrolase 428 616 3.6E-27 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 Gene3D G3DSA:1.20.1110.10 103 438 1.3E-31 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 190 707 2.9E-101 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 167 706 5.3E-134 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 Gene3D G3DSA:1.20.1110.10 570 700 4.0E-22 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 Pfam PF00403 Heavy-metal-associated domain 22 80 4.0E-14 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 Pfam PF00122 E1-E2 ATPase 230 408 7.1E-41 T 28-03-2018 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 SUPERFAMILY SSF56784 481 704 9.07E-38 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 SUPERFAMILY SSF56784 429 446 9.07E-38 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 201 689 1.2E-63 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 Gene3D G3DSA:3.40.1110.10 439 569 5.0E-13 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 SUPERFAMILY SSF81665 188 232 4.18E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 SUPERFAMILY SSF81665 329 422 4.18E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 SUPERFAMILY SSF81665 653 681 4.18E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CJD35_RS13950 4af4fdb2c01a67f989a21f9087c091d1 711 ProSitePatterns PS01047 Heavy-metal-associated domain. 24 53 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CJD35_RS17245 2fe2c5267b1bf89dc7c92fb5c26af9d7 162 SUPERFAMILY SSF47616 34 131 3.2E-12 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS17245 2fe2c5267b1bf89dc7c92fb5c26af9d7 162 Pfam PF13410 Glutathione S-transferase, C-terminal domain 61 123 2.9E-6 T 28-03-2018 CJD35_RS17245 2fe2c5267b1bf89dc7c92fb5c26af9d7 162 Gene3D G3DSA:1.20.1050.10 16 147 8.6E-15 T 28-03-2018 CJD35_RS03375 e2a5f12869fa1bb6ffbc2186dce5ee10 465 Pfam PF13566 Domain of unknown function (DUF4130 77 235 7.5E-39 T 28-03-2018 IPR025404 Domain of unknown function DUF4130 CJD35_RS03375 e2a5f12869fa1bb6ffbc2186dce5ee10 465 SUPERFAMILY SSF52141 269 446 3.92E-57 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS03375 e2a5f12869fa1bb6ffbc2186dce5ee10 465 Pfam PF03167 Uracil DNA glycosylase superfamily 295 443 1.4E-37 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS03375 e2a5f12869fa1bb6ffbc2186dce5ee10 465 SMART SM00987 295 455 7.4E-41 T 28-03-2018 CJD35_RS03375 e2a5f12869fa1bb6ffbc2186dce5ee10 465 TIGRFAM TIGR03914 UDG_fam_dom: uracil-DNA glycosylase family domain 238 457 9.5E-99 T 28-03-2018 IPR005273 Uracil-DNA glycosylase family 4 CJD35_RS03375 e2a5f12869fa1bb6ffbc2186dce5ee10 465 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 8 236 1.1E-60 T 28-03-2018 IPR023875 DNA metabolism protein, putative CJD35_RS03375 e2a5f12869fa1bb6ffbc2186dce5ee10 465 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 281 447 2.6E-39 T 28-03-2018 IPR005273 Uracil-DNA glycosylase family 4 CJD35_RS03375 e2a5f12869fa1bb6ffbc2186dce5ee10 465 Gene3D G3DSA:3.40.470.10 265 461 6.4E-59 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS03375 e2a5f12869fa1bb6ffbc2186dce5ee10 465 SMART SM00986 295 455 7.4E-41 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS16630 233fce30f25e48d1d31eef616411cfbb 429 Gene3D G3DSA:1.20.1250.20 213 413 7.0E-17 T 28-03-2018 CJD35_RS16630 233fce30f25e48d1d31eef616411cfbb 429 SUPERFAMILY SSF103473 17 409 8.5E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS16630 233fce30f25e48d1d31eef616411cfbb 429 Gene3D G3DSA:1.20.1250.20 12 212 7.2E-30 T 28-03-2018 CJD35_RS16630 233fce30f25e48d1d31eef616411cfbb 429 Pfam PF07690 Major Facilitator Superfamily 31 360 5.8E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS03595 5123d4b84962a70daa153ef252d804aa 593 SUPERFAMILY SSF55920 303 559 3.27E-60 T 28-03-2018 IPR000994 Peptidase M24 CJD35_RS03595 5123d4b84962a70daa153ef252d804aa 593 Gene3D G3DSA:3.40.350.10 155 289 6.8E-21 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CJD35_RS03595 5123d4b84962a70daa153ef252d804aa 593 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 1.2E-39 T 28-03-2018 CJD35_RS03595 5123d4b84962a70daa153ef252d804aa 593 Pfam PF16188 C-terminal region of peptidase_M24 534 593 3.8E-22 T 28-03-2018 IPR032416 Peptidase M24, C-terminal domain CJD35_RS03595 5123d4b84962a70daa153ef252d804aa 593 Gene3D G3DSA:3.90.230.10 300 553 4.8E-67 T 28-03-2018 CJD35_RS03595 5123d4b84962a70daa153ef252d804aa 593 SUPERFAMILY SSF53092 3 129 9.94E-13 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CJD35_RS03595 5123d4b84962a70daa153ef252d804aa 593 Pfam PF00557 Metallopeptidase family M24 310 523 1.8E-49 T 28-03-2018 IPR000994 Peptidase M24 CJD35_RS03595 5123d4b84962a70daa153ef252d804aa 593 Gene3D G3DSA:3.40.350.10 1 146 4.3E-44 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CJD35_RS03595 5123d4b84962a70daa153ef252d804aa 593 Pfam PF01321 Creatinase/Prolidase N-terminal domain 7 139 1.4E-18 T 28-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 CJD35_RS01110 de22d623485d9b8289978613e919777f 690 SMART SM00387 574 681 3.5E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS01110 de22d623485d9b8289978613e919777f 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 625 6.6E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS01110 de22d623485d9b8289978613e919777f 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 630 640 6.6E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS01110 de22d623485d9b8289978613e919777f 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 641 659 6.6E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS01110 de22d623485d9b8289978613e919777f 690 PRINTS PR00344 Bacterial sensor protein C-terminal signature 665 678 6.6E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS01110 de22d623485d9b8289978613e919777f 690 SUPERFAMILY SSF55781 326 468 5.89E-12 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS01110 de22d623485d9b8289978613e919777f 690 TIGRFAM TIGR02916 PEP_his_kin: putative PEP-CTERM system histidine kinase 11 678 1.0E-147 T 28-03-2018 IPR014265 Signal transduction histidine kinase, PEP-CTERM system, putative CJD35_RS01110 de22d623485d9b8289978613e919777f 690 Gene3D G3DSA:3.30.450.40 300 471 4.1E-13 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS01110 de22d623485d9b8289978613e919777f 690 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 575 680 1.6E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS01110 de22d623485d9b8289978613e919777f 690 SUPERFAMILY SSF55874 541 680 3.14E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS01110 de22d623485d9b8289978613e919777f 690 Gene3D G3DSA:3.30.565.10 498 680 6.5E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS17075 9ca2d8b6d0417b505d2bd61db1e511eb 332 Pfam PF08908 Domain of unknown function (DUF1852) 4 324 2.1E-172 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 CJD35_RS17075 9ca2d8b6d0417b505d2bd61db1e511eb 332 PIRSF PIRSF034367 1 328 7.4E-178 T 28-03-2018 IPR015004 Protein of unknown function DUF1852 CJD35_RS01170 5e8ac0b1d2683972efd5db8a9ba154f2 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 28-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CJD35_RS01170 5e8ac0b1d2683972efd5db8a9ba154f2 95 PRINTS PR00297 10kDa chaperonin signature 25 46 2.4E-34 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS01170 5e8ac0b1d2683972efd5db8a9ba154f2 95 PRINTS PR00297 10kDa chaperonin signature 60 72 2.4E-34 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS01170 5e8ac0b1d2683972efd5db8a9ba154f2 95 PRINTS PR00297 10kDa chaperonin signature 3 18 2.4E-34 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS01170 5e8ac0b1d2683972efd5db8a9ba154f2 95 PRINTS PR00297 10kDa chaperonin signature 81 94 2.4E-34 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS01170 5e8ac0b1d2683972efd5db8a9ba154f2 95 Pfam PF00166 Chaperonin 10 Kd subunit 3 94 2.9E-36 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS01170 5e8ac0b1d2683972efd5db8a9ba154f2 95 SMART SM00883 2 94 1.9E-59 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS01170 5e8ac0b1d2683972efd5db8a9ba154f2 95 Gene3D G3DSA:2.30.33.40 1 95 6.8E-41 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS01170 5e8ac0b1d2683972efd5db8a9ba154f2 95 SUPERFAMILY SSF50129 1 94 1.32E-35 T 28-03-2018 IPR011032 GroES-like CJD35_RS01170 5e8ac0b1d2683972efd5db8a9ba154f2 95 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.403 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS20340 48be3d4fab789a52990db6e2b6f6080c 168 SMART SM00318 24 150 0.0039 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS20340 48be3d4fab789a52990db6e2b6f6080c 168 Gene3D G3DSA:2.40.50.90 27 163 2.9E-16 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain CJD35_RS20340 48be3d4fab789a52990db6e2b6f6080c 168 SUPERFAMILY SSF50199 31 153 8.24E-19 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS20340 48be3d4fab789a52990db6e2b6f6080c 168 Pfam PF00565 Staphylococcal nuclease homologue 42 145 3.7E-7 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS15050 de13b90e2fc5e1c5b2c149885b46acfd 825 Pfam PF00593 TonB dependent receptor 299 819 3.7E-22 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15050 de13b90e2fc5e1c5b2c149885b46acfd 825 Gene3D G3DSA:2.40.170.20 171 824 7.6E-51 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15050 de13b90e2fc5e1c5b2c149885b46acfd 825 SUPERFAMILY SSF56935 25 819 4.76E-83 T 28-03-2018 CJD35_RS15050 de13b90e2fc5e1c5b2c149885b46acfd 825 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 157 6.6E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15050 de13b90e2fc5e1c5b2c149885b46acfd 825 Gene3D G3DSA:2.170.130.10 25 169 6.5E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS00985 c7424fcba32d2610d62653f4054cdc0b 620 Pfam PF00005 ABC transporter 24 147 9.0E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS00985 c7424fcba32d2610d62653f4054cdc0b 620 Pfam PF00005 ABC transporter 325 458 7.6E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS00985 c7424fcba32d2610d62653f4054cdc0b 620 SUPERFAMILY SSF52540 4 193 1.46E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS00985 c7424fcba32d2610d62653f4054cdc0b 620 ProSitePatterns PS00211 ABC transporters family signature. 430 444 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS00985 c7424fcba32d2610d62653f4054cdc0b 620 Pfam PF16326 ABC transporter C-terminal domain 544 613 2.6E-16 T 28-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CJD35_RS00985 c7424fcba32d2610d62653f4054cdc0b 620 SUPERFAMILY SSF52540 319 490 8.04E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS00985 c7424fcba32d2610d62653f4054cdc0b 620 Gene3D G3DSA:3.40.50.300 248 535 3.1E-51 T 28-03-2018 CJD35_RS00985 c7424fcba32d2610d62653f4054cdc0b 620 Gene3D G3DSA:3.40.50.300 1 247 3.1E-42 T 28-03-2018 CJD35_RS00985 c7424fcba32d2610d62653f4054cdc0b 620 SMART SM00382 333 503 3.9E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS00985 c7424fcba32d2610d62653f4054cdc0b 620 SMART SM00382 30 192 1.0E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS21235 e1a7861a4ee74fc004e2a0c1e45ab938 155 SUPERFAMILY SSF52402 36 144 2.26E-18 T 28-03-2018 CJD35_RS21235 e1a7861a4ee74fc004e2a0c1e45ab938 155 Pfam PF00582 Universal stress protein family 36 144 6.6E-18 T 28-03-2018 IPR006016 UspA GO:0006950 CJD35_RS21235 e1a7861a4ee74fc004e2a0c1e45ab938 155 Gene3D G3DSA:3.40.50.620 14 148 2.5E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS18115 e1a7861a4ee74fc004e2a0c1e45ab938 155 SUPERFAMILY SSF52402 36 144 2.26E-18 T 28-03-2018 CJD35_RS18115 e1a7861a4ee74fc004e2a0c1e45ab938 155 Pfam PF00582 Universal stress protein family 36 144 6.6E-18 T 28-03-2018 IPR006016 UspA GO:0006950 CJD35_RS18115 e1a7861a4ee74fc004e2a0c1e45ab938 155 Gene3D G3DSA:3.40.50.620 14 148 2.5E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS21800 aa62797c6cd7fb1a43128417323d90eb 115 Pfam PF03713 Domain of unknown function (DUF305) 19 108 4.9E-20 T 28-03-2018 IPR005183 Domain of unknown function DUF305 CJD35_RS21800 aa62797c6cd7fb1a43128417323d90eb 115 Gene3D G3DSA:1.20.1260.10 1 111 8.0E-30 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS04485 ed634a7d84dbd447441ac71e3e0e7ff4 194 SUPERFAMILY SSF52540 3 168 1.27E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04485 ed634a7d84dbd447441ac71e3e0e7ff4 194 Gene3D G3DSA:3.40.50.300 1 185 1.5E-10 T 28-03-2018 CJD35_RS08965 92b86b1bac904c2a7e578499245eff71 407 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 33 396 9.7E-112 T 28-03-2018 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 CJD35_RS08965 92b86b1bac904c2a7e578499245eff71 407 SUPERFAMILY SSF51556 26 274 4.42E-97 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS08965 92b86b1bac904c2a7e578499245eff71 407 SUPERFAMILY SSF51556 319 402 4.42E-97 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS08965 92b86b1bac904c2a7e578499245eff71 407 Gene3D G3DSA:3.20.20.140 24 407 4.1E-137 T 28-03-2018 CJD35_RS15830 330e332034d895a9ac49bbecf50af3cc 130 Pfam PF12680 SnoaL-like domain 11 109 3.7E-13 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS15830 330e332034d895a9ac49bbecf50af3cc 130 Gene3D G3DSA:3.10.450.50 1 127 7.0E-21 T 28-03-2018 CJD35_RS15830 330e332034d895a9ac49bbecf50af3cc 130 SUPERFAMILY SSF54427 1 124 8.99E-22 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 Gene3D G3DSA:2.40.128.120 227 343 3.2E-32 T 28-03-2018 IPR009111 Quinohemoprotein amine dehydrogenase, alpha subunit, domain 2 CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 Pfam PF09100 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV 438 574 3.2E-44 T 28-03-2018 IPR015184 Quinohemoprotein amine dehydrogenase, alpha subunit domain IV CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 Gene3D G3DSA:3.90.10.10 22 200 0.0016 T 28-03-2018 CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 SUPERFAMILY SSF46626 45 121 8.24E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 Pfam PF14930 Quinohemoprotein amine dehydrogenase, alpha subunit domain II 229 343 5.3E-27 T 28-03-2018 IPR009111 Quinohemoprotein amine dehydrogenase, alpha subunit, domain 2 CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 TIGRFAM TIGR03908 QH_alpha: quinohemoprotein amine dehydrogenase, alpha subunit 38 574 3.5E-173 T 28-03-2018 IPR023887 Quinohemoprotein amine dehydrogenase, alpha subunit CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 SUPERFAMILY SSF81296 434 572 7.7E-37 T 28-03-2018 IPR014756 Immunoglobulin E-set CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 Gene3D G3DSA:2.60.40.10 434 563 1.5E-38 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 Gene3D G3DSA:2.60.40.10 347 432 9.8E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 SUPERFAMILY SSF81296 346 432 7.46E-6 T 28-03-2018 IPR014756 Immunoglobulin E-set CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 Pfam PF09099 Quinohemoprotein amine dehydrogenase, alpha subunit domain III 347 432 3.0E-17 T 28-03-2018 IPR015183 Quinohemoprotein amine dehydrogenase, alpha subunit domain III CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 Pfam PF09098 Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding 43 176 4.6E-33 T 28-03-2018 IPR015182 Quinohemoprotein amine dehydrogenase, alpha subunit, haem binding domain CJD35_RS17870 8a15a2b927b6d4a06166bbaf5daaff15 576 SUPERFAMILY SSF69298 214 342 6.54E-19 T 28-03-2018 IPR009111 Quinohemoprotein amine dehydrogenase, alpha subunit, domain 2 CJD35_RS08415 3b8da92fa1ce1141f46412fb1ae71ce2 254 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 4 252 2.9E-100 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CJD35_RS08415 3b8da92fa1ce1141f46412fb1ae71ce2 254 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 252 45.335 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CJD35_RS08415 3b8da92fa1ce1141f46412fb1ae71ce2 254 Pfam PF00977 Histidine biosynthesis protein 6 234 4.9E-85 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CJD35_RS08415 3b8da92fa1ce1141f46412fb1ae71ce2 254 Gene3D G3DSA:3.20.20.70 5 248 1.4E-64 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS08415 3b8da92fa1ce1141f46412fb1ae71ce2 254 SUPERFAMILY SSF51366 4 252 6.75E-81 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJD35_RS18855 944419de7a6d7597cba769c2efb7940f 333 SUPERFAMILY SSF56349 125 326 1.15E-34 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS18855 944419de7a6d7597cba769c2efb7940f 333 SUPERFAMILY SSF47823 24 124 2.75E-24 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CJD35_RS18855 944419de7a6d7597cba769c2efb7940f 333 Pfam PF00589 Phage integrase family 133 320 2.4E-14 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS18855 944419de7a6d7597cba769c2efb7940f 333 Gene3D G3DSA:1.10.443.10 128 323 2.2E-21 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS18855 944419de7a6d7597cba769c2efb7940f 333 Gene3D G3DSA:1.10.150.130 24 127 2.3E-12 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS04065 91086ac4dcc6620ddab2f3f484c1e004 223 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 35 180 1.1E-28 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS04065 91086ac4dcc6620ddab2f3f484c1e004 223 Gene3D G3DSA:2.40.100.10 15 210 3.2E-28 T 28-03-2018 IPR029000 Cyclophilin-like domain CJD35_RS04065 91086ac4dcc6620ddab2f3f484c1e004 223 SUPERFAMILY SSF50891 32 195 1.33E-31 T 28-03-2018 IPR029000 Cyclophilin-like domain CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 Gene3D G3DSA:3.40.50.300 78 363 1.4E-90 T 28-03-2018 CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 7 476 1.1E-251 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 Hamap MF_01347 ATP synthase subunit beta [atpB]. 5 476 56.976 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 SUPERFAMILY SSF47917 361 476 7.06E-53 T 28-03-2018 CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 358 6.4E-61 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 SMART SM00382 145 335 5.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 SUPERFAMILY SSF50615 4 77 1.82E-25 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 Gene3D G3DSA:2.40.10.170 1 77 7.6E-33 T 28-03-2018 CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 Gene3D G3DSA:1.10.1140.10 364 474 2.0E-44 T 28-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 PIRSF PIRSF039072 1 481 2.2E-279 T 28-03-2018 CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 SUPERFAMILY SSF52540 80 363 8.23E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 10 76 6.9E-23 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS09740 7862cf3aa31d210dd39f891d09bc2e86 481 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 349 358 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CJD35_RS10335 9bbad7806fb06fc375b637ce18a79805 182 PRINTS PR00400 Tetracycline repressor protein signature 75 94 9.7E-6 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CJD35_RS10335 9bbad7806fb06fc375b637ce18a79805 182 PRINTS PR00400 Tetracycline repressor protein signature 23 46 9.7E-6 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CJD35_RS10335 9bbad7806fb06fc375b637ce18a79805 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 54 1.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS10335 9bbad7806fb06fc375b637ce18a79805 182 SUPERFAMILY SSF46689 4 69 2.79E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS10335 9bbad7806fb06fc375b637ce18a79805 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 4.2E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS10335 9bbad7806fb06fc375b637ce18a79805 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 4.2E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS10335 9bbad7806fb06fc375b637ce18a79805 182 Gene3D G3DSA:1.10.357.10 2 182 1.9E-28 T 28-03-2018 CJD35_RS10335 9bbad7806fb06fc375b637ce18a79805 182 SUPERFAMILY SSF48498 73 179 3.83E-13 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 17 336 2.2E-174 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 Gene3D G3DSA:3.30.250.10 282 339 8.3E-25 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 SUPERFAMILY SSF52540 18 280 8.83E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 ProSitePatterns PS00321 recA signature. 226 234 - T 28-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 PRINTS PR00142 RecA protein signature 178 207 9.7E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 PRINTS PR00142 RecA protein signature 256 285 9.7E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 PRINTS PR00142 RecA protein signature 106 135 9.7E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 PRINTS PR00142 RecA protein signature 140 169 9.7E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 PRINTS PR00142 RecA protein signature 310 327 9.7E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 PRINTS PR00142 RecA protein signature 223 251 9.7E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 SUPERFAMILY SSF54752 281 337 9.68E-21 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 Pfam PF00154 recA bacterial DNA recombination protein 20 281 3.3E-147 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 Hamap MF_00268 Protein RecA [recA]. 18 342 52.272 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 Gene3D G3DSA:3.40.50.300 39 281 1.8E-47 T 28-03-2018 CJD35_RS02855 c29c26697912a5509fe47713417a1d92 357 SMART SM00382 70 241 2.9E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS12200 4d81f6abd9085771534466321cd8d346 263 Gene3D G3DSA:3.40.190.10 88 222 7.5E-12 T 28-03-2018 CJD35_RS12200 4d81f6abd9085771534466321cd8d346 263 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS12200 4d81f6abd9085771534466321cd8d346 263 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS12200 4d81f6abd9085771534466321cd8d346 263 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.1E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS12200 4d81f6abd9085771534466321cd8d346 263 Gene3D G3DSA:1.10.10.10 1 87 8.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12200 4d81f6abd9085771534466321cd8d346 263 SUPERFAMILY SSF53850 86 262 2.17E-15 T 28-03-2018 CJD35_RS12200 4d81f6abd9085771534466321cd8d346 263 SUPERFAMILY SSF46785 3 87 1.85E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12200 4d81f6abd9085771534466321cd8d346 263 Pfam PF03466 LysR substrate binding domain 188 262 1.2E-6 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS12200 4d81f6abd9085771534466321cd8d346 263 Pfam PF03466 LysR substrate binding domain 90 156 2.2E-8 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS12200 4d81f6abd9085771534466321cd8d346 263 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 7.9E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS08755 bd9cad1e66c5d534ac6021816b12ec0a 456 Pfam PF01474 Class-II DAHP synthetase family 5 442 9.5E-198 T 28-03-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CJD35_RS08755 bd9cad1e66c5d534ac6021816b12ec0a 456 SUPERFAMILY SSF51569 3 446 8.06E-197 T 28-03-2018 CJD35_RS08755 bd9cad1e66c5d534ac6021816b12ec0a 456 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 5 447 1.2E-206 T 28-03-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CJD35_RS08755 bd9cad1e66c5d534ac6021816b12ec0a 456 Gene3D G3DSA:3.20.20.70 237 386 4.1E-6 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS06540 b3b98ec8f99ca2db9796729d282efbab 285 SUPERFAMILY SSF53474 29 276 2.01E-55 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS06540 b3b98ec8f99ca2db9796729d282efbab 285 PIRSF PIRSF001112 22 283 1.3E-65 T 28-03-2018 IPR016292 Epoxide hydrolase GO:0033961 KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 CJD35_RS06540 b3b98ec8f99ca2db9796729d282efbab 285 Gene3D G3DSA:3.40.50.1820 17 283 3.7E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS06540 b3b98ec8f99ca2db9796729d282efbab 285 PRINTS PR00412 Epoxide hydrolase signature 224 240 1.1E-15 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS06540 b3b98ec8f99ca2db9796729d282efbab 285 PRINTS PR00412 Epoxide hydrolase signature 256 278 1.1E-15 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS06540 b3b98ec8f99ca2db9796729d282efbab 285 PRINTS PR00412 Epoxide hydrolase signature 90 103 1.1E-15 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS06540 b3b98ec8f99ca2db9796729d282efbab 285 PRINTS PR00412 Epoxide hydrolase signature 76 89 1.1E-15 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS06540 b3b98ec8f99ca2db9796729d282efbab 285 PRINTS PR00412 Epoxide hydrolase signature 31 46 1.1E-15 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS06540 b3b98ec8f99ca2db9796729d282efbab 285 Pfam PF00561 alpha/beta hydrolase fold 28 121 7.0E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS21495 2710ab70bc33ad5cddcc47dd767dea54 1847 Gene3D G3DSA:3.30.565.10 34 213 8.2E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS21495 2710ab70bc33ad5cddcc47dd767dea54 1847 Pfam PF13020 Domain of unknown function (DUF3883) 1714 1812 2.3E-8 T 28-03-2018 IPR024975 Domain of unknown function DUF3883 CJD35_RS21495 2710ab70bc33ad5cddcc47dd767dea54 1847 SUPERFAMILY SSF55874 41 162 6.77E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18375 2710ab70bc33ad5cddcc47dd767dea54 1847 Gene3D G3DSA:3.30.565.10 34 213 8.2E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18375 2710ab70bc33ad5cddcc47dd767dea54 1847 Pfam PF13020 Domain of unknown function (DUF3883) 1714 1812 2.3E-8 T 28-03-2018 IPR024975 Domain of unknown function DUF3883 CJD35_RS18375 2710ab70bc33ad5cddcc47dd767dea54 1847 SUPERFAMILY SSF55874 41 162 6.77E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 SUPERFAMILY SSF57716 13 48 1.1E-11 T 28-03-2018 CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.7E-20 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 315 389 9.0E-15 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 SMART SM01086 315 410 7.0E-36 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 309 2.9E-50 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 Gene3D G3DSA:1.10.8.60 315 406 1.1E-32 T 28-03-2018 CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 10 407 2.8E-199 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 Gene3D G3DSA:3.40.50.300 57 313 9.7E-69 T 28-03-2018 CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 SMART SM00994 12 51 8.3E-25 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 413 52.81 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 SMART SM00382 111 268 3.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS00700 19de842e35fafddb557f404c53687b39 422 SUPERFAMILY SSF52540 64 401 1.7E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS19635 42ac402da99d3fd7f85fbc3ba5ec38e6 160 Gene3D G3DSA:1.10.10.10 1 154 3.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19635 42ac402da99d3fd7f85fbc3ba5ec38e6 160 Pfam PF13463 Winged helix DNA-binding domain 43 104 7.5E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19635 42ac402da99d3fd7f85fbc3ba5ec38e6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 2.7E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19635 42ac402da99d3fd7f85fbc3ba5ec38e6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 141 2.7E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19635 42ac402da99d3fd7f85fbc3ba5ec38e6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 2.7E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19635 42ac402da99d3fd7f85fbc3ba5ec38e6 160 SMART SM00347 31 131 6.6E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19635 42ac402da99d3fd7f85fbc3ba5ec38e6 160 SUPERFAMILY SSF46785 7 148 3.21E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03695 42cfb9bb3e6dfee3e067c5a8da9c6797 120 PRINTS PR00062 Ribosomal protein L20 signature 42 71 7.7E-35 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03695 42cfb9bb3e6dfee3e067c5a8da9c6797 120 PRINTS PR00062 Ribosomal protein L20 signature 12 41 7.7E-35 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03695 42cfb9bb3e6dfee3e067c5a8da9c6797 120 PRINTS PR00062 Ribosomal protein L20 signature 75 101 7.7E-35 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03695 42cfb9bb3e6dfee3e067c5a8da9c6797 120 Gene3D G3DSA:1.10.1900.20 55 116 2.1E-26 T 28-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03695 42cfb9bb3e6dfee3e067c5a8da9c6797 120 SUPERFAMILY SSF74731 3 117 5.49E-48 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03695 42cfb9bb3e6dfee3e067c5a8da9c6797 120 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 2.0E-20 T 28-03-2018 CJD35_RS03695 42cfb9bb3e6dfee3e067c5a8da9c6797 120 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.2E-48 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03695 42cfb9bb3e6dfee3e067c5a8da9c6797 120 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 28.669 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03695 42cfb9bb3e6dfee3e067c5a8da9c6797 120 Pfam PF00453 Ribosomal protein L20 3 109 3.5E-48 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03695 42cfb9bb3e6dfee3e067c5a8da9c6797 120 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS07225 6fe046995824d4439a69e65717fb8907 262 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 5 88 1.1E-26 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CJD35_RS07225 6fe046995824d4439a69e65717fb8907 262 Gene3D G3DSA:3.10.310.10 1 123 6.1E-29 T 28-03-2018 CJD35_RS07225 6fe046995824d4439a69e65717fb8907 262 Gene3D G3DSA:3.10.310.10 124 251 9.4E-28 T 28-03-2018 CJD35_RS07225 6fe046995824d4439a69e65717fb8907 262 PIRSF PIRSF016184 1 262 7.4E-47 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CJD35_RS07225 6fe046995824d4439a69e65717fb8907 262 Pfam PF02567 Phenazine biosynthesis-like protein 9 258 1.3E-50 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CJD35_RS07225 6fe046995824d4439a69e65717fb8907 262 SUPERFAMILY SSF54506 4 261 3.49E-71 T 28-03-2018 CJD35_RS11105 3b2aa65ca75410b1088076382a1d45db 134 Pfam PF11776 Nickel/cobalt transporter regulator 77 125 2.7E-18 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CJD35_RS11105 3b2aa65ca75410b1088076382a1d45db 134 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 72 125 7.0E-9 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CJD35_RS11105 3b2aa65ca75410b1088076382a1d45db 134 Gene3D G3DSA:3.10.450.160 21 134 9.2E-17 T 28-03-2018 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 SMART SM00387 299 420 3.6E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 SMART SM00448 443 558 2.1E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 Pfam PF13426 PAS domain 81 176 3.4E-20 T 28-03-2018 IPR000014 PAS domain CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 SUPERFAMILY SSF52172 441 569 2.13E-25 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 SUPERFAMILY SSF55874 248 422 4.06E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 Gene3D G3DSA:3.40.50.2300 434 578 4.7E-25 T 28-03-2018 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 Gene3D G3DSA:3.30.565.10 257 420 1.6E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 Pfam PF00072 Response regulator receiver domain 445 558 7.6E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 SUPERFAMILY SSF47384 184 254 4.12E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 SMART SM00086 136 178 2.0E-7 T 28-03-2018 IPR001610 PAC motif CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 Gene3D G3DSA:3.30.450.20 56 185 5.5E-27 T 28-03-2018 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 Gene3D G3DSA:1.10.287.130 186 254 4.4E-10 T 28-03-2018 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 63 184 3.1E-15 T 28-03-2018 IPR000014 PAS domain CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 SMART SM00388 193 258 1.1E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 SUPERFAMILY SSF55785 68 178 3.32E-25 T 28-03-2018 IPR000014 PAS domain CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 300 417 1.2E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 363 4.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 417 4.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 377 4.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 398 4.5E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14935 39463777637530353e7598c7b5bf4af5 582 Pfam PF00512 His Kinase A (phospho-acceptor) domain 194 255 1.1E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS18105 55013946c388a4711276e5d649a37896 149 SUPERFAMILY SSF46458 5 142 1.83E-33 T 28-03-2018 IPR009050 Globin-like CJD35_RS18105 55013946c388a4711276e5d649a37896 149 Gene3D G3DSA:1.10.490.10 2 149 1.9E-32 T 28-03-2018 CJD35_RS18105 55013946c388a4711276e5d649a37896 149 Pfam PF00042 Globin 11 104 4.0E-8 T 28-03-2018 IPR000971 Globin GO:0020037 CJD35_RS21225 55013946c388a4711276e5d649a37896 149 SUPERFAMILY SSF46458 5 142 1.83E-33 T 28-03-2018 IPR009050 Globin-like CJD35_RS21225 55013946c388a4711276e5d649a37896 149 Gene3D G3DSA:1.10.490.10 2 149 1.9E-32 T 28-03-2018 CJD35_RS21225 55013946c388a4711276e5d649a37896 149 Pfam PF00042 Globin 11 104 4.0E-8 T 28-03-2018 IPR000971 Globin GO:0020037 CJD35_RS00620 71ba5f8d3a7cc8ac3dfc86ba70c430b7 209 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 186 6.8E-38 T 28-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CJD35_RS00620 71ba5f8d3a7cc8ac3dfc86ba70c430b7 209 Pfam PF00814 Glycoprotease family 30 122 1.0E-14 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJD35_RS00620 71ba5f8d3a7cc8ac3dfc86ba70c430b7 209 SUPERFAMILY SSF53067 2 96 1.04E-20 T 28-03-2018 CJD35_RS00620 71ba5f8d3a7cc8ac3dfc86ba70c430b7 209 Gene3D G3DSA:3.30.420.40 1 135 1.0E-23 T 28-03-2018 CJD35_RS20190 8a7dfd75aff351141d395b0132fa267c 258 ProDom PD038622 DNA MOM-LIKE MU MODIFICATION PHAGE MOM 26 157 4.0E-5 T 28-03-2018 IPR020291 DNA modification protein Mom CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 191 4.7E-4 T 28-03-2018 CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 SUPERFAMILY SSF51735 5 261 2.22E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 Pfam PF00106 short chain dehydrogenase 10 202 1.2E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 Gene3D G3DSA:3.40.50.720 1 261 2.2E-54 T 28-03-2018 CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS18315 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.0E-21 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 191 4.7E-4 T 28-03-2018 CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 SUPERFAMILY SSF51735 5 261 2.22E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 Pfam PF00106 short chain dehydrogenase 10 202 1.2E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 Gene3D G3DSA:3.40.50.720 1 261 2.2E-54 T 28-03-2018 CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS21435 3cc67b8087eae30e4738bd878e539f15 331 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.9E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS07640 8019482b3eb169caf0b9f9595d81586b 193 ProSitePatterns PS00194 Thioredoxin family active site. 80 98 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CJD35_RS07640 8019482b3eb169caf0b9f9595d81586b 193 SUPERFAMILY SSF52833 45 189 1.53E-33 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS07640 8019482b3eb169caf0b9f9595d81586b 193 Gene3D G3DSA:3.40.30.10 17 193 1.7E-29 T 28-03-2018 CJD35_RS07640 8019482b3eb169caf0b9f9595d81586b 193 Pfam PF08534 Redoxin 51 182 5.7E-17 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CJD35_RS11680 de4310d565933b794c2eb3e3658fd52a 96 Gene3D G3DSA:1.10.1200.10 14 96 2.0E-11 T 28-03-2018 CJD35_RS11680 de4310d565933b794c2eb3e3658fd52a 96 SUPERFAMILY SSF47336 22 94 3.31E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CJD35_RS11680 de4310d565933b794c2eb3e3658fd52a 96 Pfam PF00550 Phosphopantetheine attachment site 20 89 3.3E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CJD35_RS17400 afe2c8a1f2f726057039f195b2f35dc5 411 Gene3D G3DSA:3.40.630.10 7 247 9.8E-39 T 28-03-2018 CJD35_RS17400 afe2c8a1f2f726057039f195b2f35dc5 411 Gene3D G3DSA:3.40.630.10 248 408 3.9E-25 T 28-03-2018 CJD35_RS17400 afe2c8a1f2f726057039f195b2f35dc5 411 SUPERFAMILY SSF55031 210 324 8.02E-25 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS17400 afe2c8a1f2f726057039f195b2f35dc5 411 PIRSF PIRSF001235 6 408 1.9E-127 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 CJD35_RS17400 afe2c8a1f2f726057039f195b2f35dc5 411 SUPERFAMILY SSF53187 332 404 4.37E-75 T 28-03-2018 CJD35_RS17400 afe2c8a1f2f726057039f195b2f35dc5 411 SUPERFAMILY SSF53187 18 219 4.37E-75 T 28-03-2018 CJD35_RS17400 afe2c8a1f2f726057039f195b2f35dc5 411 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 23 400 6.8E-111 T 28-03-2018 IPR010158 Amidase, carbamoylase-type GO:0008152|GO:0016813 CJD35_RS17400 afe2c8a1f2f726057039f195b2f35dc5 411 Pfam PF01546 Peptidase family M20/M25/M40 77 402 4.1E-31 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CJD35_RS17400 afe2c8a1f2f726057039f195b2f35dc5 411 Pfam PF07687 Peptidase dimerisation domain 217 304 8.0E-5 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS02145 333033c8946ba8cac2f9cfffeb33d613 465 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 307 460 6.2E-59 T 28-03-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator CJD35_RS02145 333033c8946ba8cac2f9cfffeb33d613 465 Gene3D G3DSA:1.10.260.40 2 81 2.9E-15 T 28-03-2018 CJD35_RS02145 333033c8946ba8cac2f9cfffeb33d613 465 SUPERFAMILY SSF47413 7 69 5.9E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS02145 333033c8946ba8cac2f9cfffeb33d613 465 Pfam PF13560 Helix-turn-helix domain 10 68 3.0E-12 T 28-03-2018 CJD35_RS02145 333033c8946ba8cac2f9cfffeb33d613 465 SMART SM00530 12 67 1.9E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS02145 333033c8946ba8cac2f9cfffeb33d613 465 Pfam PF06114 IrrE N-terminal-like domain 185 306 4.2E-16 T 28-03-2018 IPR010359 IrrE N-terminal-like domain CJD35_RS02145 333033c8946ba8cac2f9cfffeb33d613 465 PIRSF PIRSF019251 1 465 3.8E-145 T 28-03-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 CJD35_RS08580 3881dcd75718d3d7896bf2e8cf14f1ca 231 Gene3D G3DSA:3.30.300.20 17 107 1.2E-27 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CJD35_RS08580 3881dcd75718d3d7896bf2e8cf14f1ca 231 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 37.605 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CJD35_RS08580 3881dcd75718d3d7896bf2e8cf14f1ca 231 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.1E-88 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CJD35_RS08580 3881dcd75718d3d7896bf2e8cf14f1ca 231 SUPERFAMILY SSF54814 2 106 2.3E-35 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CJD35_RS08580 3881dcd75718d3d7896bf2e8cf14f1ca 231 SMART SM00322 60 125 2.9E-7 T 28-03-2018 IPR004087 K Homology domain GO:0003676 CJD35_RS08580 3881dcd75718d3d7896bf2e8cf14f1ca 231 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 9.3E-38 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08580 3881dcd75718d3d7896bf2e8cf14f1ca 231 SUPERFAMILY SSF54821 108 206 4.71E-38 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08580 3881dcd75718d3d7896bf2e8cf14f1ca 231 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 28-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08580 3881dcd75718d3d7896bf2e8cf14f1ca 231 Pfam PF07650 KH domain 38 110 1.2E-19 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08580 3881dcd75718d3d7896bf2e8cf14f1ca 231 Gene3D G3DSA:3.30.1140.32 108 208 8.3E-37 T 28-03-2018 CJD35_RS00940 8c2a1a66020513323cfefcdcf1d0425f 170 PIRSF PIRSF000194 1 162 6.2E-57 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CJD35_RS00940 8c2a1a66020513323cfefcdcf1d0425f 170 Pfam PF00186 Dihydrofolate reductase 4 157 4.4E-50 T 28-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CJD35_RS00940 8c2a1a66020513323cfefcdcf1d0425f 170 PRINTS PR00070 Dihydrofolate reductase signature 15 25 1.6E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CJD35_RS00940 8c2a1a66020513323cfefcdcf1d0425f 170 PRINTS PR00070 Dihydrofolate reductase signature 92 106 1.6E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CJD35_RS00940 8c2a1a66020513323cfefcdcf1d0425f 170 PRINTS PR00070 Dihydrofolate reductase signature 42 53 1.6E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CJD35_RS00940 8c2a1a66020513323cfefcdcf1d0425f 170 PRINTS PR00070 Dihydrofolate reductase signature 29 37 1.6E-14 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CJD35_RS00940 8c2a1a66020513323cfefcdcf1d0425f 170 SUPERFAMILY SSF53597 3 159 4.35E-48 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CJD35_RS00940 8c2a1a66020513323cfefcdcf1d0425f 170 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 15 37 - T 28-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CJD35_RS00940 8c2a1a66020513323cfefcdcf1d0425f 170 Gene3D G3DSA:3.40.430.10 1 161 2.1E-43 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CJD35_RS00510 467ed40d9c2fe3c155fca7aed75291dc 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 123 0.0011 T 28-03-2018 IPR001451 Hexapeptide repeat CJD35_RS00510 467ed40d9c2fe3c155fca7aed75291dc 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 26 59 6.9E-8 T 28-03-2018 IPR001451 Hexapeptide repeat CJD35_RS00510 467ed40d9c2fe3c155fca7aed75291dc 198 SUPERFAMILY SSF51161 19 193 6.02E-45 T 28-03-2018 IPR011004 Trimeric LpxA-like CJD35_RS00510 467ed40d9c2fe3c155fca7aed75291dc 198 Gene3D G3DSA:2.160.10.10 15 198 1.5E-40 T 28-03-2018 CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 Gene3D G3DSA:3.30.460.10 189 326 9.7E-41 T 28-03-2018 CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 Pfam PF04607 Region found in RelA / SpoT proteins 236 346 1.2E-36 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 Pfam PF13328 HD domain 26 176 1.3E-48 T 28-03-2018 IPR003607 HD/PDEase domain CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 698 6.5E-204 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 SMART SM00954 236 346 3.4E-65 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 Gene3D G3DSA:3.30.70.260 624 701 1.3E-13 T 28-03-2018 CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 SUPERFAMILY SSF81301 182 389 8.99E-56 T 28-03-2018 CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 SUPERFAMILY SSF81271 375 444 6.76E-20 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 Pfam PF13291 ACT domain 627 700 1.5E-13 T 28-03-2018 IPR002912 ACT domain CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 SUPERFAMILY SSF109604 6 190 5.65E-66 T 28-03-2018 CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 SMART SM00471 41 153 2.7E-9 T 28-03-2018 IPR003607 HD/PDEase domain CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 Gene3D G3DSA:3.10.20.30 379 453 1.2E-22 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 Pfam PF02824 TGS domain 386 444 6.4E-21 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CJD35_RS09325 0669a79eea1d6639eb69413446a220ba 701 SUPERFAMILY SSF55021 624 698 5.73E-11 T 28-03-2018 CJD35_RS15220 33992948254c270958560b40c7df95b9 151 Gene3D G3DSA:3.10.129.10 1 149 5.1E-36 T 28-03-2018 CJD35_RS15220 33992948254c270958560b40c7df95b9 151 Pfam PF01575 MaoC like domain 10 116 1.7E-19 T 28-03-2018 IPR002539 MaoC-like domain CJD35_RS15220 33992948254c270958560b40c7df95b9 151 SUPERFAMILY SSF54637 1 150 4.25E-45 T 28-03-2018 IPR029069 HotDog domain CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 19 684 42.742 T 28-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 448 672 1.3E-38 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 Pfam PF04545 Sigma-70, region 4 619 672 1.8E-18 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 PRINTS PR00046 Major sigma-70 factor signature 623 635 6.6E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 PRINTS PR00046 Major sigma-70 factor signature 644 659 6.6E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 PRINTS PR00046 Major sigma-70 factor signature 659 670 6.6E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 PRINTS PR00046 Major sigma-70 factor signature 499 507 6.6E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 PRINTS PR00046 Major sigma-70 factor signature 475 488 6.6E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 Pfam PF04542 Sigma-70 region 2 451 520 2.0E-21 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 Pfam PF03979 Sigma-70 factor, region 1.1 28 102 8.9E-23 T 28-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 Gene3D G3DSA:1.10.601.10 144 520 8.3E-105 T 28-03-2018 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 Gene3D G3DSA:1.10.601.10 3 143 4.5E-14 T 28-03-2018 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 644 670 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 SUPERFAMILY SSF88946 144 207 9.73E-90 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 SUPERFAMILY SSF88946 242 518 9.73E-90 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 Pfam PF04546 Sigma-70, non-essential region 169 419 1.3E-42 T 28-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 Pfam PF04539 Sigma-70 region 3 530 605 6.9E-29 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 SUPERFAMILY SSF88659 581 683 1.96E-26 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 SUPERFAMILY SSF88659 524 597 6.1E-21 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 Gene3D G3DSA:1.10.10.10 521 571 8.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 447 683 4.9E-120 T 28-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 475 488 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 Pfam PF00140 Sigma-70 factor, region 1.2 127 159 2.8E-13 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS14885 76979b21ff0028602d3f7e6d1b27cceb 685 Gene3D G3DSA:1.10.10.10 613 684 1.0E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07405 00cdb1ecd5c237bc2ddede3a8d7000b1 520 SUPERFAMILY SSF51445 46 404 2.75E-90 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CJD35_RS07405 00cdb1ecd5c237bc2ddede3a8d7000b1 520 SUPERFAMILY SSF51011 386 519 1.03E-33 T 28-03-2018 CJD35_RS07405 00cdb1ecd5c237bc2ddede3a8d7000b1 520 Gene3D G3DSA:2.60.40.1180 397 520 2.4E-35 T 28-03-2018 CJD35_RS07405 00cdb1ecd5c237bc2ddede3a8d7000b1 520 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 323 513 1.0E-45 T 28-03-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 CJD35_RS07405 00cdb1ecd5c237bc2ddede3a8d7000b1 520 SMART SM00813 323 513 3.6E-83 T 28-03-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 CJD35_RS07405 00cdb1ecd5c237bc2ddede3a8d7000b1 520 Gene3D G3DSA:3.20.20.80 46 396 1.8E-103 T 28-03-2018 CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 248 5.6E-62 T 28-03-2018 CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 8.5E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 8.5E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 8.5E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 2.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 2.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.0E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 SUPERFAMILY SSF51735 7 250 7.73E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 Gene3D G3DSA:3.40.50.720 46 261 3.6E-57 T 28-03-2018 CJD35_RS15325 eac6b596038aa996abec4915764d4814 267 Gene3D G3DSA:3.40.50.720 1 45 1.2E-8 T 28-03-2018 CJD35_RS07280 8a82ae13f2111fc044bf82af61ce02e9 382 TIGRFAM TIGR01790 carotene-cycl: lycopene cyclase family protein 8 373 7.4E-89 T 28-03-2018 IPR010108 Lycopene cyclase, beta/epsilon GO:0016117|GO:0016705 CJD35_RS07280 8a82ae13f2111fc044bf82af61ce02e9 382 Gene3D G3DSA:3.50.50.60 4 217 6.5E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS07280 8a82ae13f2111fc044bf82af61ce02e9 382 SUPERFAMILY SSF51905 4 209 2.22E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS07280 8a82ae13f2111fc044bf82af61ce02e9 382 TIGRFAM TIGR01789 lycopene_cycl: lycopene cyclase 8 374 3.6E-132 T 28-03-2018 IPR008461 Lycopene cyclase GO:0016117|GO:0045436 CJD35_RS07280 8a82ae13f2111fc044bf82af61ce02e9 382 Pfam PF05834 Lycopene cyclase protein 8 373 6.9E-82 T 28-03-2018 CJD35_RS01175 53e91afc638ba713e9cdcd584573c7fd 144 Pfam PF00582 Universal stress protein family 3 140 2.0E-23 T 28-03-2018 IPR006016 UspA GO:0006950 CJD35_RS01175 53e91afc638ba713e9cdcd584573c7fd 144 Gene3D G3DSA:3.40.50.620 1 143 2.4E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS01175 53e91afc638ba713e9cdcd584573c7fd 144 PRINTS PR01438 Universal stress protein signature 3 21 7.8E-11 T 28-03-2018 IPR006015 Universal stress protein A CJD35_RS01175 53e91afc638ba713e9cdcd584573c7fd 144 PRINTS PR01438 Universal stress protein signature 101 113 7.8E-11 T 28-03-2018 IPR006015 Universal stress protein A CJD35_RS01175 53e91afc638ba713e9cdcd584573c7fd 144 PRINTS PR01438 Universal stress protein signature 118 140 7.8E-11 T 28-03-2018 IPR006015 Universal stress protein A CJD35_RS01175 53e91afc638ba713e9cdcd584573c7fd 144 SUPERFAMILY SSF52402 1 141 4.35E-24 T 28-03-2018 CJD35_RS01175 53e91afc638ba713e9cdcd584573c7fd 144 PIRSF PIRSF006276 1 142 4.4E-19 T 28-03-2018 IPR006015 Universal stress protein A CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 Gene3D G3DSA:3.30.450.20 168 279 1.8E-9 T 28-03-2018 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 Gene3D G3DSA:3.30.450.20 280 417 4.4E-13 T 28-03-2018 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 SUPERFAMILY SSF47384 543 627 1.04E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 SUPERFAMILY SSF55785 163 272 2.27E-5 T 28-03-2018 IPR000014 PAS domain CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 SUPERFAMILY SSF55785 408 525 3.84E-5 T 28-03-2018 IPR000014 PAS domain CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 766 779 3.9E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 709 723 3.9E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 742 760 3.9E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 672 780 1.5E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 Gene3D G3DSA:3.30.450.20 41 167 5.4E-5 T 28-03-2018 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 Gene3D G3DSA:3.30.450.20 424 579 2.4E-18 T 28-03-2018 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 SMART SM00388 558 626 5.3E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 Gene3D G3DSA:3.30.565.10 588 780 3.8E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 SMART SM00091 296 363 0.075 T 28-03-2018 IPR000014 PAS domain CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 SMART SM00091 424 490 15.0 T 28-03-2018 IPR000014 PAS domain CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 SMART SM00091 176 242 120.0 T 28-03-2018 IPR000014 PAS domain CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 Pfam PF00512 His Kinase A (phospho-acceptor) domain 559 626 4.3E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 SUPERFAMILY SSF55785 280 399 8.38E-8 T 28-03-2018 IPR000014 PAS domain CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 Pfam PF12860 PAS fold 302 414 2.1E-11 T 28-03-2018 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 Pfam PF12860 PAS fold 431 543 8.5E-13 T 28-03-2018 CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 SMART SM00387 672 781 8.6E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13095 9f949fca6363ace7dbd1485c8d4797c6 781 SUPERFAMILY SSF55874 615 780 4.85E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18905 44ea7fd0d99449d1961c9f95f6e879fa 309 Gene3D G3DSA:2.130.10.130 203 300 1.7E-5 T 28-03-2018 CJD35_RS18905 44ea7fd0d99449d1961c9f95f6e879fa 309 Gene3D G3DSA:2.130.10.130 35 180 0.11 T 28-03-2018 CJD35_RS18905 44ea7fd0d99449d1961c9f95f6e879fa 309 SUPERFAMILY SSF69318 57 284 6.41E-7 T 28-03-2018 CJD35_RS20170 c09e30d37714af1ca85876c8c691954d 149 SUPERFAMILY SSF46458 5 145 4.99E-37 T 28-03-2018 IPR009050 Globin-like CJD35_RS20170 c09e30d37714af1ca85876c8c691954d 149 Gene3D G3DSA:1.10.490.10 1 149 3.0E-37 T 28-03-2018 CJD35_RS20170 c09e30d37714af1ca85876c8c691954d 149 Pfam PF00042 Globin 11 105 4.0E-10 T 28-03-2018 IPR000971 Globin GO:0020037 CJD35_RS02045 9faa392d9b54bda7caf8f090c454d008 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 235 2.3E-110 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CJD35_RS02045 9faa392d9b54bda7caf8f090c454d008 238 SUPERFAMILY SSF55666 153 236 1.7E-22 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CJD35_RS02045 9faa392d9b54bda7caf8f090c454d008 238 SUPERFAMILY SSF54211 1 181 1.06E-45 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS02045 9faa392d9b54bda7caf8f090c454d008 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 46.841 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CJD35_RS02045 9faa392d9b54bda7caf8f090c454d008 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 129 - T 28-03-2018 IPR018336 Ribonuclease PH, conserved site CJD35_RS02045 9faa392d9b54bda7caf8f090c454d008 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 3.1E-21 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CJD35_RS02045 9faa392d9b54bda7caf8f090c454d008 238 Gene3D G3DSA:3.30.230.70 1 237 1.2E-52 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CJD35_RS02045 9faa392d9b54bda7caf8f090c454d008 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 222 1.9E-7 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CJD35_RS09830 7e74c414599be65d6e4336855ea574e3 230 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 7 216 3.4E-68 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CJD35_RS09830 7e74c414599be65d6e4336855ea574e3 230 Gene3D G3DSA:1.20.58.220 1 115 4.3E-26 T 28-03-2018 CJD35_RS09830 7e74c414599be65d6e4336855ea574e3 230 SUPERFAMILY SSF109755 7 218 1.0E-68 T 28-03-2018 CJD35_RS09830 7e74c414599be65d6e4336855ea574e3 230 Gene3D G3DSA:1.20.58.220 116 224 1.2E-28 T 28-03-2018 CJD35_RS09830 7e74c414599be65d6e4336855ea574e3 230 PIRSF PIRSF003107 2 222 2.8E-65 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CJD35_RS09830 7e74c414599be65d6e4336855ea574e3 230 Pfam PF01895 PhoU domain 20 108 1.1E-19 T 28-03-2018 IPR026022 PhoU domain CJD35_RS09830 7e74c414599be65d6e4336855ea574e3 230 Pfam PF01895 PhoU domain 125 208 4.3E-21 T 28-03-2018 IPR026022 PhoU domain CJD35_RS20635 32053439186c3a1241d7b3fdbff6254e 467 Gene3D G3DSA:3.40.605.10 1 258 2.4E-89 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS20635 32053439186c3a1241d7b3fdbff6254e 467 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 268 279 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS20635 32053439186c3a1241d7b3fdbff6254e 467 Gene3D G3DSA:3.40.309.10 259 449 1.1E-65 T 28-03-2018 CJD35_RS20635 32053439186c3a1241d7b3fdbff6254e 467 SUPERFAMILY SSF53720 3 466 1.19E-149 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS20635 32053439186c3a1241d7b3fdbff6254e 467 Pfam PF00171 Aldehyde dehydrogenase family 17 462 2.4E-147 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS20635 32053439186c3a1241d7b3fdbff6254e 467 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 240 247 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS01910 b077f8f0a64f6f71138a77ab108c7fb9 539 SUPERFAMILY SSF51905 101 292 7.4E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS01910 b077f8f0a64f6f71138a77ab108c7fb9 539 SUPERFAMILY SSF51905 485 535 7.4E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS01910 b077f8f0a64f6f71138a77ab108c7fb9 539 Gene3D G3DSA:3.50.50.60 96 539 3.2E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS01910 b077f8f0a64f6f71138a77ab108c7fb9 539 PIRSF PIRSF038984 1 539 3.6E-226 T 28-03-2018 IPR028348 FAD dependent protein CJD35_RS17615 12af3d527d09422fea3bb4a30b7d8916 222 SUPERFAMILY SSF47616 74 197 6.26E-39 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS17615 12af3d527d09422fea3bb4a30b7d8916 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 77 2.8E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS17615 12af3d527d09422fea3bb4a30b7d8916 222 SUPERFAMILY SSF52833 3 80 5.61E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS17615 12af3d527d09422fea3bb4a30b7d8916 222 Gene3D G3DSA:3.40.30.10 1 89 2.1E-28 T 28-03-2018 CJD35_RS17615 12af3d527d09422fea3bb4a30b7d8916 222 Gene3D G3DSA:1.20.1050.10 90 138 2.9E-15 T 28-03-2018 CJD35_RS17615 12af3d527d09422fea3bb4a30b7d8916 222 Gene3D G3DSA:1.20.1050.10 139 196 1.7E-19 T 28-03-2018 CJD35_RS17615 12af3d527d09422fea3bb4a30b7d8916 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 192 4.6E-12 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CJD35_RS00890 a1615c3ce4a05c339d8d0d2d98af313c 140 Pfam PF01592 NifU-like N terminal domain 28 84 2.9E-4 T 28-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CJD35_RS00890 a1615c3ce4a05c339d8d0d2d98af313c 140 Gene3D G3DSA:3.90.1010.10 2 136 3.3E-23 T 28-03-2018 CJD35_RS00890 a1615c3ce4a05c339d8d0d2d98af313c 140 SUPERFAMILY SSF82649 4 134 3.4E-33 T 28-03-2018 CJD35_RS09635 0741f65e02eda032c7207e19668de4f2 334 Gene3D G3DSA:3.20.20.30 2 326 4.2E-65 T 28-03-2018 CJD35_RS09635 0741f65e02eda032c7207e19668de4f2 334 SUPERFAMILY SSF51679 3 320 3.79E-74 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS09635 0741f65e02eda032c7207e19668de4f2 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 321 1.6E-126 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 CJD35_RS09635 0741f65e02eda032c7207e19668de4f2 334 Pfam PF00296 Luciferase-like monooxygenase 15 294 1.1E-29 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS20435 2cdd556343bc8862acdad4dd8698d8ad 281 Gene3D G3DSA:3.90.580.10 2 80 3.4E-5 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS20435 2cdd556343bc8862acdad4dd8698d8ad 281 Gene3D G3DSA:3.40.1360.10 175 280 1.6E-9 T 28-03-2018 CJD35_RS20435 2cdd556343bc8862acdad4dd8698d8ad 281 Pfam PF13362 Toprim domain 190 276 7.4E-11 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS08470 c9f594c6dd503e3c65b7b34e900b1f25 189 Pfam PF10755 Protein of unknown function (DUF2585) 26 187 2.7E-77 T 28-03-2018 IPR019691 Protein of unknown function DUF2585 GO:0005886 CJD35_RS08470 c9f594c6dd503e3c65b7b34e900b1f25 189 Hamap MF_01514 UPF0314 protein . 1 188 35.746 T 28-03-2018 IPR019691 Protein of unknown function DUF2585 GO:0005886 CJD35_RS14775 d464a0c5e905c66d585e2412663e5afd 154 ProSitePatterns PS00018 EF-hand calcium-binding domain. 103 115 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site CJD35_RS14775 d464a0c5e905c66d585e2412663e5afd 154 Pfam PF13202 EF hand 97 115 1.7E-4 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 CJD35_RS14775 d464a0c5e905c66d585e2412663e5afd 154 Pfam PF13202 EF hand 75 91 0.018 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 CJD35_RS14775 d464a0c5e905c66d585e2412663e5afd 154 Pfam PF13202 EF hand 123 140 0.0018 T 28-03-2018 IPR002048 EF-hand domain GO:0005509 CJD35_RS14775 d464a0c5e905c66d585e2412663e5afd 154 Gene3D G3DSA:1.10.238.10 79 108 1.7E-6 T 28-03-2018 CJD35_RS14775 d464a0c5e905c66d585e2412663e5afd 154 Gene3D G3DSA:1.10.238.10 26 78 0.2 T 28-03-2018 CJD35_RS14775 d464a0c5e905c66d585e2412663e5afd 154 ProSitePatterns PS00018 EF-hand calcium-binding domain. 127 139 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site CJD35_RS14775 d464a0c5e905c66d585e2412663e5afd 154 SUPERFAMILY SSF47473 72 141 2.18E-12 T 28-03-2018 IPR011992 EF-hand domain pair CJD35_RS14775 d464a0c5e905c66d585e2412663e5afd 154 Gene3D G3DSA:1.10.238.10 109 147 3.4E-8 T 28-03-2018 CJD35_RS04045 c414219caa541663e82f0f4b1b9c94b0 190 SUPERFAMILY SSF52972 1 183 4.32E-53 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CJD35_RS04045 c414219caa541663e82f0f4b1b9c94b0 190 Pfam PF02545 Maf-like protein 2 184 9.2E-47 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CJD35_RS04045 c414219caa541663e82f0f4b1b9c94b0 190 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 183 1.4E-42 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CJD35_RS04045 c414219caa541663e82f0f4b1b9c94b0 190 Gene3D G3DSA:3.90.950.10 1 190 1.1E-57 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CJD35_RS04045 c414219caa541663e82f0f4b1b9c94b0 190 PIRSF PIRSF006305 1 189 2.4E-46 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CJD35_RS04045 c414219caa541663e82f0f4b1b9c94b0 190 Hamap MF_00528 Septum formation protein Maf [maf]. 2 189 29.221 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CJD35_RS09960 184511ed617ab7f17687d00babc953f5 164 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 47 157 1.2E-21 T 28-03-2018 IPR018673 Protein of unknown function DUF2141 CJD35_RS15260 170e6bd6b896fb40e2f7956fa83a7278 70 Pfam PF03994 Domain of Unknown Function (DUF350) 14 68 5.3E-17 T 28-03-2018 IPR007140 Protein of unknown function DUF350 CJD35_RS03525 dde664f8f2cbff3b9e52a574a10f3f2c 214 SUPERFAMILY SSF47616 83 210 3.13E-24 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS03525 dde664f8f2cbff3b9e52a574a10f3f2c 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 77 1.5E-10 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS03525 dde664f8f2cbff3b9e52a574a10f3f2c 214 Gene3D G3DSA:3.40.30.10 1 96 1.9E-17 T 28-03-2018 CJD35_RS03525 dde664f8f2cbff3b9e52a574a10f3f2c 214 Gene3D G3DSA:1.20.1050.10 97 207 1.2E-26 T 28-03-2018 CJD35_RS03525 dde664f8f2cbff3b9e52a574a10f3f2c 214 SUPERFAMILY SSF52833 1 103 2.95E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS03525 dde664f8f2cbff3b9e52a574a10f3f2c 214 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 193 5.7E-12 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CJD35_RS05665 75de42203bdca9552cc0f00a01a8eae0 275 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 266 55.91 T 28-03-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein CJD35_RS05665 75de42203bdca9552cc0f00a01a8eae0 275 Gene3D G3DSA:3.40.50.300 4 274 1.7E-10 T 28-03-2018 CJD35_RS05665 75de42203bdca9552cc0f00a01a8eae0 275 Pfam PF03618 Kinase/pyrophosphorylase 6 261 7.5E-91 T 28-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CJD35_RS14840 67cb4d6da1caeb46ff843a29d01e3c62 73 Pfam PF13773 Domain of unknown function (DUF4170) 3 68 7.1E-35 T 28-03-2018 IPR025226 Protein of unknown function DUF4170 CJD35_RS13335 3f8b2eef4d56f867395be8db02afe698 444 SUPERFAMILY SSF111283 9 438 4.45E-88 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CJD35_RS13335 3f8b2eef4d56f867395be8db02afe698 444 Gene3D G3DSA:3.30.2290.10 4 211 2.0E-27 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CJD35_RS13335 3f8b2eef4d56f867395be8db02afe698 444 Pfam PF01523 Putative modulator of DNA gyrase 27 311 3.1E-55 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CJD35_RS15385 02043d107aab6d7f803994df3fa432fb 395 Pfam PF13469 Sulfotransferase family 91 341 1.6E-35 T 28-03-2018 CJD35_RS15385 02043d107aab6d7f803994df3fa432fb 395 SUPERFAMILY SSF52540 88 137 4.18E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15385 02043d107aab6d7f803994df3fa432fb 395 SUPERFAMILY SSF52540 213 354 4.18E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15385 02043d107aab6d7f803994df3fa432fb 395 Gene3D G3DSA:3.40.50.300 85 395 5.2E-25 T 28-03-2018 CJD35_RS18900 992c0e185fc5d261caef5c8f9f8f2ff9 512 Pfam PF08447 PAS fold 213 301 2.1E-12 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 CJD35_RS18900 992c0e185fc5d261caef5c8f9f8f2ff9 512 Pfam PF01590 GAF domain 37 170 7.9E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS18900 992c0e185fc5d261caef5c8f9f8f2ff9 512 SMART SM00911 321 402 3.2E-28 T 28-03-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 CJD35_RS18900 992c0e185fc5d261caef5c8f9f8f2ff9 512 Pfam PF07536 HWE histidine kinase 321 402 1.4E-19 T 28-03-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 CJD35_RS18900 992c0e185fc5d261caef5c8f9f8f2ff9 512 SMART SM00065 35 179 1.3E-4 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS18900 992c0e185fc5d261caef5c8f9f8f2ff9 512 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 187 312 2.8E-11 T 28-03-2018 IPR000014 PAS domain CJD35_RS18900 992c0e185fc5d261caef5c8f9f8f2ff9 512 Gene3D G3DSA:3.30.450.40 24 171 1.1E-23 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS18900 992c0e185fc5d261caef5c8f9f8f2ff9 512 SUPERFAMILY SSF55785 176 306 2.79E-17 T 28-03-2018 IPR000014 PAS domain CJD35_RS18900 992c0e185fc5d261caef5c8f9f8f2ff9 512 SUPERFAMILY SSF55781 37 180 1.96E-22 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS18900 992c0e185fc5d261caef5c8f9f8f2ff9 512 Gene3D G3DSA:3.30.450.20 172 335 7.1E-24 T 28-03-2018 CJD35_RS18900 992c0e185fc5d261caef5c8f9f8f2ff9 512 Gene3D G3DSA:3.30.565.10 377 510 9.1E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14075 11863252090b17f0928e1a2235d27f9c 337 Pfam PF04055 Radical SAM superfamily 24 185 5.0E-29 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS14075 11863252090b17f0928e1a2235d27f9c 337 SUPERFAMILY SSF102114 12 283 6.93E-72 T 28-03-2018 CJD35_RS14075 11863252090b17f0928e1a2235d27f9c 337 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 26 37 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 CJD35_RS14075 11863252090b17f0928e1a2235d27f9c 337 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 11 337 2.7E-106 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CJD35_RS14075 11863252090b17f0928e1a2235d27f9c 337 SMART SM00729 20 224 1.1E-8 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS14075 11863252090b17f0928e1a2235d27f9c 337 Pfam PF06463 Molybdenum Cofactor Synthesis C 192 316 4.6E-34 T 28-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 CJD35_RS14075 11863252090b17f0928e1a2235d27f9c 337 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 11 337 37.829 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CJD35_RS14075 11863252090b17f0928e1a2235d27f9c 337 Pfam PF13353 4Fe-4S single cluster domain 14 130 1.1E-9 T 28-03-2018 CJD35_RS14075 11863252090b17f0928e1a2235d27f9c 337 Gene3D G3DSA:3.20.20.70 7 337 3.7E-75 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS03470 86e7c1da608c6025c2bbfebf649270b7 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 111 4.8E-29 T 28-03-2018 IPR006504 Transcriptional regulator Spx/MgsR CJD35_RS03470 86e7c1da608c6025c2bbfebf649270b7 118 Gene3D G3DSA:3.40.30.10 1 114 7.7E-34 T 28-03-2018 CJD35_RS03470 86e7c1da608c6025c2bbfebf649270b7 118 SUPERFAMILY SSF52833 1 113 1.14E-31 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS03470 86e7c1da608c6025c2bbfebf649270b7 118 Pfam PF03960 ArsC family 5 110 1.0E-15 T 28-03-2018 IPR006660 Arsenate reductase-like CJD35_RS21595 e06981530a05f9d3500bef944cbe9afd 123 SUPERFAMILY SSF81296 22 123 3.57E-25 T 28-03-2018 IPR014756 Immunoglobulin E-set CJD35_RS21595 e06981530a05f9d3500bef944cbe9afd 123 Gene3D G3DSA:2.60.40.1220 21 123 8.1E-26 T 28-03-2018 CJD35_RS21595 e06981530a05f9d3500bef944cbe9afd 123 Pfam PF04234 CopC domain 22 122 6.0E-22 T 28-03-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 Gene3D G3DSA:3.30.470.20 188 322 1.9E-57 T 28-03-2018 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 41.483 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 SUPERFAMILY SSF52440 1 101 1.73E-35 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 1.4E-34 T 28-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 Gene3D G3DSA:3.90.600.10 327 421 8.8E-33 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 286 293 - T 28-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 Gene3D G3DSA:3.40.50.20 2 84 1.2E-36 T 28-03-2018 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 SMART SM01209 101 292 3.7E-130 T 28-03-2018 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 328 418 4.8E-27 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 SUPERFAMILY SSF56059 102 315 3.36E-62 T 28-03-2018 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 SMART SM01210 327 420 2.4E-48 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 420 8.5E-157 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 Gene3D G3DSA:3.30.1490.20 85 186 2.2E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 292 6.1E-76 T 28-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CJD35_RS04800 ef4b2f0d6704ebf550b6d12dae7d2051 425 SUPERFAMILY SSF51246 326 420 2.67E-29 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CJD35_RS06905 f1f05f51dae772bfe46555821fb666cc 140 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 49 115 4.0E-19 T 28-03-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CJD35_RS06905 f1f05f51dae772bfe46555821fb666cc 140 Gene3D G3DSA:2.40.50.140 52 115 1.1E-12 T 28-03-2018 CJD35_RS06905 f1f05f51dae772bfe46555821fb666cc 140 SUPERFAMILY SSF50249 23 117 4.8E-12 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS12005 b973b5b679ce3595b76d4652cd7ba446 467 Pfam PF03060 Nitronate monooxygenase 16 445 1.8E-14 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CJD35_RS12005 b973b5b679ce3595b76d4652cd7ba446 467 SUPERFAMILY SSF51412 80 337 6.78E-12 T 28-03-2018 CJD35_RS12005 b973b5b679ce3595b76d4652cd7ba446 467 SUPERFAMILY SSF51412 26 50 6.78E-12 T 28-03-2018 CJD35_RS12005 b973b5b679ce3595b76d4652cd7ba446 467 Gene3D G3DSA:3.20.20.70 17 466 1.0E-10 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 SMART SM00564 121 153 2.2E-7 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 SMART SM00564 168 205 12.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 SMART SM00564 455 494 360.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 SMART SM00564 71 102 8.7E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 SMART SM00564 504 536 16.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 SMART SM00564 271 298 18.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 243 264 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 Pfam PF01011 PQQ enzyme repeat 282 307 5.2E-5 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 SUPERFAMILY SSF46626 601 697 1.14E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 621 692 1.1E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 Pfam PF13360 PQQ-like domain 55 203 8.5E-20 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 SUPERFAMILY SSF50998 24 598 5.36E-140 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 Gene3D G3DSA:1.10.760.10 606 711 4.4E-13 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 24 564 1.4E-149 T 28-03-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 Gene3D G3DSA:2.140.10.10 15 410 6.6E-82 T 28-03-2018 CJD35_RS16295 cb567ca1f87640cb3cd04052c1564c6e 724 Gene3D G3DSA:2.140.10.10 469 602 1.4E-9 T 28-03-2018 CJD35_RS06975 b1c0bda0e9989cf25b1573f450a930ff 484 Pfam PF02646 RmuC family 163 452 2.8E-81 T 28-03-2018 IPR003798 DNA recombination RmuC CJD35_RS06975 b1c0bda0e9989cf25b1573f450a930ff 484 Gene3D G3DSA:1.20.5.170 28 460 0.0062 T 28-03-2018 CJD35_RS11000 0e1fe053fc6293440ee72f010133b6b4 374 Gene3D G3DSA:3.40.50.720 1 172 8.7E-37 T 28-03-2018 CJD35_RS11000 0e1fe053fc6293440ee72f010133b6b4 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 142 368 3.4E-66 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CJD35_RS11000 0e1fe053fc6293440ee72f010133b6b4 374 SUPERFAMILY SSF52283 1 168 1.62E-46 T 28-03-2018 CJD35_RS11000 0e1fe053fc6293440ee72f010133b6b4 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 137 3.0E-37 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CJD35_RS11000 0e1fe053fc6293440ee72f010133b6b4 374 Gene3D G3DSA:3.40.50.720 192 373 4.7E-40 T 28-03-2018 CJD35_RS11000 0e1fe053fc6293440ee72f010133b6b4 374 SMART SM01002 147 313 3.0E-76 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CJD35_RS11000 0e1fe053fc6293440ee72f010133b6b4 374 SMART SM01003 4 138 2.5E-50 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CJD35_RS11000 0e1fe053fc6293440ee72f010133b6b4 374 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 171 196 - T 28-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CJD35_RS11000 0e1fe053fc6293440ee72f010133b6b4 374 SUPERFAMILY SSF51735 139 319 1.01E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS02450 3c7f901acef62b4d81b6455c64f5f65d 184 SUPERFAMILY SSF52317 8 177 4.87E-52 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS02450 3c7f901acef62b4d81b6455c64f5f65d 184 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 9 175 6.7E-53 T 28-03-2018 IPR006286 Peptidase C56, PfpI CJD35_RS02450 3c7f901acef62b4d81b6455c64f5f65d 184 Pfam PF01965 DJ-1/PfpI family 8 174 5.1E-55 T 28-03-2018 IPR002818 DJ-1/PfpI CJD35_RS02450 3c7f901acef62b4d81b6455c64f5f65d 184 Gene3D G3DSA:3.40.50.880 2 184 2.0E-53 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS03180 e42634bf3501c6f019eb483070d263e8 272 SUPERFAMILY SSF53955 19 82 9.7E-10 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS03180 e42634bf3501c6f019eb483070d263e8 272 Gene3D G3DSA:1.10.530.10 7 212 2.7E-28 T 28-03-2018 CJD35_RS17380 e9d13f78ff9d6c602bb493d8a626c22f 441 SUPERFAMILY SSF75304 3 427 1.31E-112 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJD35_RS17380 e9d13f78ff9d6c602bb493d8a626c22f 441 Gene3D G3DSA:3.90.1300.10 3 429 2.6E-117 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJD35_RS17380 e9d13f78ff9d6c602bb493d8a626c22f 441 TIGRFAM TIGR02715 amido_AtzE: amidohydrolase, AtzE family 3 431 9.7E-159 T 28-03-2018 IPR014087 Amidohydrolase, AtzE type KEGG: 00791+3.5.1.84|MetaCyc: PWY-5169 CJD35_RS17380 e9d13f78ff9d6c602bb493d8a626c22f 441 Pfam PF01425 Amidase 304 418 2.7E-16 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJD35_RS17380 e9d13f78ff9d6c602bb493d8a626c22f 441 Pfam PF01425 Amidase 21 239 4.8E-69 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJD35_RS16895 1e1390ac48162c73b6a2920ffa498e60 323 Pfam PF02321 Outer membrane efflux protein 3 115 6.1E-11 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS16895 1e1390ac48162c73b6a2920ffa498e60 323 Pfam PF02321 Outer membrane efflux protein 138 319 4.9E-15 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS16895 1e1390ac48162c73b6a2920ffa498e60 323 SUPERFAMILY SSF56954 2 320 9.55E-70 T 28-03-2018 CJD35_RS16895 1e1390ac48162c73b6a2920ffa498e60 323 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 1 320 1.0E-72 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CJD35_RS16895 1e1390ac48162c73b6a2920ffa498e60 323 Gene3D G3DSA:1.20.1600.10 1 323 1.5E-60 T 28-03-2018 CJD35_RS07630 8eaee526ab3f648ba2992479728e536f 140 Gene3D G3DSA:3.30.1330.40 12 140 1.4E-32 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJD35_RS07630 8eaee526ab3f648ba2992479728e536f 140 Pfam PF01042 Endoribonuclease L-PSP 22 138 1.3E-24 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CJD35_RS07630 8eaee526ab3f648ba2992479728e536f 140 SUPERFAMILY SSF55298 22 140 4.24E-34 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJD35_RS08230 3d1aa323141af2160b06a3d5db93c28b 212 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 137 210 2.5E-25 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS08230 3d1aa323141af2160b06a3d5db93c28b 212 Gene3D G3DSA:1.20.1270.60 127 212 4.0E-25 T 28-03-2018 CJD35_RS08230 3d1aa323141af2160b06a3d5db93c28b 212 SUPERFAMILY SSF55785 13 115 9.25E-20 T 28-03-2018 IPR000014 PAS domain CJD35_RS08230 3d1aa323141af2160b06a3d5db93c28b 212 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 121 2.5E-9 T 28-03-2018 IPR000014 PAS domain CJD35_RS08230 3d1aa323141af2160b06a3d5db93c28b 212 SUPERFAMILY SSF58104 130 210 1.31E-31 T 28-03-2018 CJD35_RS08230 3d1aa323141af2160b06a3d5db93c28b 212 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 156 183 2.0E-17 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS08230 3d1aa323141af2160b06a3d5db93c28b 212 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 185 212 2.0E-17 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS08230 3d1aa323141af2160b06a3d5db93c28b 212 Gene3D G3DSA:3.30.450.20 8 126 7.5E-23 T 28-03-2018 CJD35_RS08230 3d1aa323141af2160b06a3d5db93c28b 212 Pfam PF08447 PAS fold 26 111 2.3E-9 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 CJD35_RS08230 3d1aa323141af2160b06a3d5db93c28b 212 SMART SM00086 76 118 9.2E-6 T 28-03-2018 IPR001610 PAC motif CJD35_RS07915 95053f327976835b771ccd3b881b080f 305 Gene3D G3DSA:3.90.1580.10 1 305 2.5E-91 T 28-03-2018 CJD35_RS07915 95053f327976835b771ccd3b881b080f 305 SUPERFAMILY SSF56436 1 301 9.23E-90 T 28-03-2018 IPR016187 C-type lectin fold CJD35_RS07915 95053f327976835b771ccd3b881b080f 305 Pfam PF03781 Sulfatase-modifying factor enzyme 1 3 301 2.1E-86 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 CJD35_RS21640 7a2726e153b4b96252688143db680ced 131 Pfam PF00817 impB/mucB/samB family 6 94 3.0E-15 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CJD35_RS21640 7a2726e153b4b96252688143db680ced 131 SUPERFAMILY SSF56672 3 96 6.58E-22 T 28-03-2018 CJD35_RS21640 7a2726e153b4b96252688143db680ced 131 Gene3D G3DSA:3.30.70.270 38 105 2.2E-6 T 28-03-2018 CJD35_RS02985 3cf628b141a832ee608a6eac4f22e511 188 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 19 188 3.1E-62 T 28-03-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CJD35_RS02985 3cf628b141a832ee608a6eac4f22e511 188 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 15 50 5.8E-16 T 28-03-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CJD35_RS02985 3cf628b141a832ee608a6eac4f22e511 188 PRINTS PR00162 Rieske 2Fe-2S subunit signature 148 160 3.4E-14 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CJD35_RS02985 3cf628b141a832ee608a6eac4f22e511 188 PRINTS PR00162 Rieske 2Fe-2S subunit signature 160 172 3.4E-14 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CJD35_RS02985 3cf628b141a832ee608a6eac4f22e511 188 PRINTS PR00162 Rieske 2Fe-2S subunit signature 121 132 3.4E-14 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CJD35_RS02985 3cf628b141a832ee608a6eac4f22e511 188 Pfam PF00355 Rieske [2Fe-2S] domain 103 174 5.1E-12 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS02985 3cf628b141a832ee608a6eac4f22e511 188 Gene3D G3DSA:1.20.5.510 14 43 6.6E-15 T 28-03-2018 CJD35_RS02985 3cf628b141a832ee608a6eac4f22e511 188 Gene3D G3DSA:2.102.10.10 44 188 2.4E-37 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS02985 3cf628b141a832ee608a6eac4f22e511 188 SUPERFAMILY SSF50022 41 186 8.77E-38 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 SUPERFAMILY SSF53067 3 123 2.33E-30 T 28-03-2018 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 Gene3D G3DSA:3.30.420.40 147 288 1.9E-18 T 28-03-2018 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 2 330 61.725 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 Pfam PF00814 Glycoprotease family 25 306 6.4E-99 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 305 4.0E-99 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 Gene3D G3DSA:3.30.420.40 2 146 1.4E-40 T 28-03-2018 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 77 97 6.5E-44 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 262 271 6.5E-44 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 132 144 6.5E-44 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 5 18 6.5E-44 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 98 117 6.5E-44 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 155 176 6.5E-44 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 4 312 1.4E-126 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CJD35_RS03755 d093fe3db59e1beac9f986452c915472 344 SUPERFAMILY SSF53067 103 308 6.15E-44 T 28-03-2018 CJD35_RS03075 890bfef1f0ab07387a32a1ef899dcea5 378 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 347 8.0E-107 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJD35_RS03075 890bfef1f0ab07387a32a1ef899dcea5 378 SUPERFAMILY SSF160544 244 351 2.62E-34 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CJD35_RS03075 890bfef1f0ab07387a32a1ef899dcea5 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 5.6E-35 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJD35_RS03075 890bfef1f0ab07387a32a1ef899dcea5 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 5.6E-35 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJD35_RS03075 890bfef1f0ab07387a32a1ef899dcea5 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 5.6E-35 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJD35_RS03075 890bfef1f0ab07387a32a1ef899dcea5 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 5.6E-35 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJD35_RS03075 890bfef1f0ab07387a32a1ef899dcea5 378 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 5.6E-35 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CJD35_RS03075 890bfef1f0ab07387a32a1ef899dcea5 378 Gene3D G3DSA:3.40.1690.10 218 353 3.1E-49 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CJD35_RS07095 9624a77f993b91aceb04e4d516bd99ac 278 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 176 210 5.9E-13 T 28-03-2018 IPR001451 Hexapeptide repeat CJD35_RS07095 9624a77f993b91aceb04e4d516bd99ac 278 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 167 1.5E-4 T 28-03-2018 IPR001451 Hexapeptide repeat CJD35_RS07095 9624a77f993b91aceb04e4d516bd99ac 278 SUPERFAMILY SSF51161 1 262 6.15E-70 T 28-03-2018 IPR011004 Trimeric LpxA-like CJD35_RS07095 9624a77f993b91aceb04e4d516bd99ac 278 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 68 1.9E-24 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CJD35_RS07095 9624a77f993b91aceb04e4d516bd99ac 278 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 278 55.7 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CJD35_RS07095 9624a77f993b91aceb04e4d516bd99ac 278 Gene3D G3DSA:1.10.166.10 3 68 1.2E-27 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CJD35_RS07095 9624a77f993b91aceb04e4d516bd99ac 278 Gene3D G3DSA:2.160.10.10 88 263 7.3E-31 T 28-03-2018 CJD35_RS07095 9624a77f993b91aceb04e4d516bd99ac 278 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 135 163 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CJD35_RS07095 9624a77f993b91aceb04e4d516bd99ac 278 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 277 2.0E-126 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CJD35_RS12070 a4f4b68e5a0a711233ea83023dad0462 717 Gene3D G3DSA:2.40.50.100 464 535 8.9E-7 T 28-03-2018 CJD35_RS12070 a4f4b68e5a0a711233ea83023dad0462 717 SUPERFAMILY SSF111369 451 536 7.72E-7 T 28-03-2018 CJD35_RS16155 f98c84f9b769e196dd312a9649c6acca 91 Gene3D G3DSA:4.10.520.10 1 91 3.8E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS16155 f98c84f9b769e196dd312a9649c6acca 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.1E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS16155 f98c84f9b769e196dd312a9649c6acca 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.1E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS16155 f98c84f9b769e196dd312a9649c6acca 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.1E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS16155 f98c84f9b769e196dd312a9649c6acca 91 SMART SM00411 1 90 8.9E-31 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS16155 f98c84f9b769e196dd312a9649c6acca 91 SUPERFAMILY SSF47729 1 90 3.83E-27 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS16155 f98c84f9b769e196dd312a9649c6acca 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.4E-29 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS03195 88db2157e4f71bd39cd23000dfb59a6d 188 Pfam PF13144 Chaperone for flagella basal body P-ring formation 123 182 3.2E-8 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CJD35_RS12790 8c1e7c843221f6895e7dc35dce65b980 353 SUPERFAMILY SSF102114 62 294 5.23E-10 T 28-03-2018 CJD35_RS12790 8c1e7c843221f6895e7dc35dce65b980 353 Pfam PF04055 Radical SAM superfamily 69 246 4.8E-12 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS12790 8c1e7c843221f6895e7dc35dce65b980 353 Gene3D G3DSA:3.20.20.70 29 318 9.2E-28 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS12790 8c1e7c843221f6895e7dc35dce65b980 353 SMART SM00729 64 289 1.3E-4 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS03700 f92dfcbc713648cfd04dcc108058b899 67 PRINTS PR00064 Ribosomal protein L35 signature 21 35 7.5E-9 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CJD35_RS03700 f92dfcbc713648cfd04dcc108058b899 67 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.5E-9 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CJD35_RS03700 f92dfcbc713648cfd04dcc108058b899 67 PRINTS PR00064 Ribosomal protein L35 signature 36 54 7.5E-9 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CJD35_RS03700 f92dfcbc713648cfd04dcc108058b899 67 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 14.836 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CJD35_RS03700 f92dfcbc713648cfd04dcc108058b899 67 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 61 3.3E-18 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CJD35_RS03700 f92dfcbc713648cfd04dcc108058b899 67 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 28-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS03700 f92dfcbc713648cfd04dcc108058b899 67 Pfam PF01632 Ribosomal protein L35 2 59 6.2E-20 T 28-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03700 f92dfcbc713648cfd04dcc108058b899 67 SUPERFAMILY SSF143034 2 64 3.66E-20 T 28-03-2018 CJD35_RS12660 5fd6b2262da70f177f6de54c251f293c 483 Gene3D G3DSA:3.40.50.300 2 238 7.7E-47 T 28-03-2018 CJD35_RS12660 5fd6b2262da70f177f6de54c251f293c 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 189.691 T 28-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CJD35_RS12660 5fd6b2262da70f177f6de54c251f293c 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 433 3.1E-53 T 28-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CJD35_RS12660 5fd6b2262da70f177f6de54c251f293c 483 Gene3D G3DSA:3.40.50.880 239 461 2.2E-21 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS12660 5fd6b2262da70f177f6de54c251f293c 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 475 3.3E-128 T 28-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CJD35_RS12660 5fd6b2262da70f177f6de54c251f293c 483 SUPERFAMILY SSF52540 1 239 1.52E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12660 5fd6b2262da70f177f6de54c251f293c 483 SUPERFAMILY SSF52317 254 444 2.37E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS12660 5fd6b2262da70f177f6de54c251f293c 483 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 236 4.5E-20 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 SUPERFAMILY SSF51735 1 172 1.78E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 Gene3D G3DSA:3.40.50.720 1 171 1.5E-35 T 28-03-2018 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 149 2.4E-39 T 28-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 Gene3D G3DSA:1.10.1040.10 172 319 1.4E-43 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 1 314 34.415 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 190 214 1.0E-37 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 230 247 1.0E-37 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 5 22 1.0E-37 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 165 189 1.0E-37 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 125 145 1.0E-37 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 PIRSF PIRSF000114 1 323 1.3E-85 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 180 201 - T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 172 310 1.3E-42 T 28-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CJD35_RS03760 31532bb83de28da1f5f02ff979273802 323 SUPERFAMILY SSF48179 171 323 2.89E-47 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS05660 01e33ef1ab68c459c132842a1f12bf24 351 Gene3D G3DSA:3.20.20.210 10 349 6.6E-81 T 28-03-2018 CJD35_RS05660 01e33ef1ab68c459c132842a1f12bf24 351 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 12 347 2.1E-107 T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CJD35_RS05660 01e33ef1ab68c459c132842a1f12bf24 351 SUPERFAMILY SSF51726 10 347 4.06E-95 T 28-03-2018 CJD35_RS05660 01e33ef1ab68c459c132842a1f12bf24 351 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 144 160 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CJD35_RS05660 01e33ef1ab68c459c132842a1f12bf24 351 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 11 349 44.058 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CJD35_RS05660 01e33ef1ab68c459c132842a1f12bf24 351 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 15 346 2.6E-115 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CJD35_RS05660 01e33ef1ab68c459c132842a1f12bf24 351 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 27 36 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CJD35_RS15775 4e4d7380ed7d267d9ea58526c014ed2f 380 Gene3D G3DSA:3.40.50.1820 2 379 6.2E-83 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS15775 4e4d7380ed7d267d9ea58526c014ed2f 380 SUPERFAMILY SSF53474 3 375 9.2E-106 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS15775 4e4d7380ed7d267d9ea58526c014ed2f 380 Pfam PF06441 Epoxide hydrolase N terminus 6 110 6.3E-35 T 28-03-2018 IPR010497 Epoxide hydrolase, N-terminal KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 CJD35_RS15775 4e4d7380ed7d267d9ea58526c014ed2f 380 PIRSF PIRSF001112 1 379 8.0E-130 T 28-03-2018 IPR016292 Epoxide hydrolase GO:0033961 KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 CJD35_RS15775 4e4d7380ed7d267d9ea58526c014ed2f 380 PRINTS PR00412 Epoxide hydrolase signature 130 145 2.3E-12 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS15775 4e4d7380ed7d267d9ea58526c014ed2f 380 PRINTS PR00412 Epoxide hydrolase signature 101 119 2.3E-12 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS15775 4e4d7380ed7d267d9ea58526c014ed2f 380 PRINTS PR00412 Epoxide hydrolase signature 352 374 2.3E-12 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS15775 4e4d7380ed7d267d9ea58526c014ed2f 380 PRINTS PR00412 Epoxide hydrolase signature 175 188 2.3E-12 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS18460 87c31ed82a4261e2b0423a5587f6a921 399 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 150 2.8E-27 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS18460 87c31ed82a4261e2b0423a5587f6a921 399 SUPERFAMILY SSF50129 1 200 2.52E-54 T 28-03-2018 IPR011032 GroES-like CJD35_RS18460 87c31ed82a4261e2b0423a5587f6a921 399 SUPERFAMILY SSF51735 165 352 2.93E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS18460 87c31ed82a4261e2b0423a5587f6a921 399 Gene3D G3DSA:3.40.50.720 187 345 4.7E-29 T 28-03-2018 CJD35_RS18460 87c31ed82a4261e2b0423a5587f6a921 399 Pfam PF00107 Zinc-binding dehydrogenase 198 267 3.2E-15 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS18460 87c31ed82a4261e2b0423a5587f6a921 399 Gene3D G3DSA:3.90.180.10 1 186 1.4E-45 T 28-03-2018 CJD35_RS18460 87c31ed82a4261e2b0423a5587f6a921 399 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 22 1.8E-11 T 28-03-2018 IPR027399 Alcohol dehydrogenase GroES-associated CJD35_RS18460 87c31ed82a4261e2b0423a5587f6a921 399 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CJD35_RS16285 1e59d5a5c8bbc6efbfd51192ace6f819 494 Gene3D G3DSA:2.140.10.10 22 399 7.2E-5 T 28-03-2018 CJD35_RS16285 1e59d5a5c8bbc6efbfd51192ace6f819 494 Pfam PF03055 Retinal pigment epithelial membrane protein 19 477 6.0E-92 T 28-03-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 CJD35_RS08370 09ac99ffd704df9a563d318bcb15f1ed 231 Gene3D G3DSA:1.10.3580.10 61 230 2.5E-46 T 28-03-2018 IPR023335 Orthogonal Bundle domain in ATP12 CJD35_RS08370 09ac99ffd704df9a563d318bcb15f1ed 231 SUPERFAMILY SSF160909 1 225 2.09E-77 T 28-03-2018 CJD35_RS08370 09ac99ffd704df9a563d318bcb15f1ed 231 Gene3D G3DSA:3.30.2180.10 1 58 1.4E-21 T 28-03-2018 CJD35_RS08370 09ac99ffd704df9a563d318bcb15f1ed 231 Pfam PF07542 ATP12 chaperone protein 2 120 6.1E-37 T 28-03-2018 IPR011419 ATP12, ATP synthase F1-assembly protein GO:0043461 CJD35_RS16265 950d0f7c2c20dcee3a59a80cac1aba6d 414 SUPERFAMILY SSF51230 189 255 6.28E-8 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS16265 950d0f7c2c20dcee3a59a80cac1aba6d 414 Pfam PF13437 HlyD family secretion protein 227 326 1.2E-14 T 28-03-2018 CJD35_RS16265 950d0f7c2c20dcee3a59a80cac1aba6d 414 Gene3D G3DSA:2.40.50.100 185 282 2.3E-11 T 28-03-2018 CJD35_RS09210 7b14fcffd5546e3061a9e1a2d4e6904d 468 Pfam PF13520 Amino acid permease 25 432 3.5E-55 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CJD35_RS09210 7b14fcffd5546e3061a9e1a2d4e6904d 468 PIRSF PIRSF006060 6 466 5.7E-85 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CJD35_RS20390 31e570f49073166a3fef84bc0b892eb4 614 Pfam PF13871 C-terminal domain on Strawberry notch homologue 84 338 5.0E-85 T 28-03-2018 IPR026937 Strawberry notch, helicase C domain CJD35_RS20390 31e570f49073166a3fef84bc0b892eb4 614 Gene3D G3DSA:3.40.50.300 36 226 1.4E-4 T 28-03-2018 CJD35_RS04920 be3b47bff2d05d0623e5909e4170f79c 580 Gene3D G3DSA:3.40.50.980 176 371 2.1E-38 T 28-03-2018 CJD35_RS04920 be3b47bff2d05d0623e5909e4170f79c 580 Gene3D G3DSA:3.30.300.30 447 580 1.8E-16 T 28-03-2018 CJD35_RS04920 be3b47bff2d05d0623e5909e4170f79c 580 SUPERFAMILY SSF56801 322 578 2.75E-115 T 28-03-2018 CJD35_RS04920 be3b47bff2d05d0623e5909e4170f79c 580 SUPERFAMILY SSF56801 2 276 2.75E-115 T 28-03-2018 CJD35_RS04920 be3b47bff2d05d0623e5909e4170f79c 580 Gene3D G3DSA:3.40.50.980 1 175 1.4E-35 T 28-03-2018 CJD35_RS04920 be3b47bff2d05d0623e5909e4170f79c 580 Pfam PF00501 AMP-binding enzyme 3 451 2.1E-93 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJD35_RS04920 be3b47bff2d05d0623e5909e4170f79c 580 Gene3D G3DSA:2.30.38.10 372 445 1.3E-18 T 28-03-2018 CJD35_RS09435 24ceae87e34c4f9770418704953bfd4a 314 Pfam PF13464 Domain of unknown function (DUF4115) 176 248 1.2E-13 T 28-03-2018 IPR025194 Domain of unknown function DUF4115 CJD35_RS09435 24ceae87e34c4f9770418704953bfd4a 314 Gene3D G3DSA:1.10.260.40 12 97 4.2E-10 T 28-03-2018 CJD35_RS09435 24ceae87e34c4f9770418704953bfd4a 314 Pfam PF13413 Helix-turn-helix domain 26 84 4.6E-21 T 28-03-2018 CJD35_RS09435 24ceae87e34c4f9770418704953bfd4a 314 SMART SM00530 25 81 5.3E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS09435 24ceae87e34c4f9770418704953bfd4a 314 SUPERFAMILY SSF47413 17 76 3.0E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 87 109 6.2E-47 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 256 281 6.2E-47 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 6.2E-47 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 109 136 6.2E-47 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 6.2E-47 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 234 256 6.2E-47 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 Gene3D G3DSA:3.40.50.170 88 279 1.1E-51 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 PIRSF PIRSF036480 2 283 1.2E-105 T 28-03-2018 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 282 2.4E-101 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 282 46.286 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 SUPERFAMILY SSF55021 4 83 2.25E-18 T 28-03-2018 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 Pfam PF01842 ACT domain 7 56 1.2E-8 T 28-03-2018 IPR002912 ACT domain CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 SUPERFAMILY SSF53328 87 283 2.35E-61 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 Gene3D G3DSA:3.30.70.260 1 87 1.4E-26 T 28-03-2018 CJD35_RS16390 e52e62ca8ff3fdcdb17a2dfa31a56ce8 284 Pfam PF00551 Formyl transferase 87 264 6.1E-37 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJD35_RS00030 680d4fc63bffa5b85291c9020d2753df 489 PRINTS PR00084 Mannitol dehydrogenase signature 180 193 1.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CJD35_RS00030 680d4fc63bffa5b85291c9020d2753df 489 PRINTS PR00084 Mannitol dehydrogenase signature 249 264 1.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CJD35_RS00030 680d4fc63bffa5b85291c9020d2753df 489 PRINTS PR00084 Mannitol dehydrogenase signature 30 40 1.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CJD35_RS00030 680d4fc63bffa5b85291c9020d2753df 489 PRINTS PR00084 Mannitol dehydrogenase signature 219 232 1.8E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CJD35_RS00030 680d4fc63bffa5b85291c9020d2753df 489 Gene3D G3DSA:1.10.1040.10 283 489 1.1E-48 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS00030 680d4fc63bffa5b85291c9020d2753df 489 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 220 453 1.1E-64 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CJD35_RS00030 680d4fc63bffa5b85291c9020d2753df 489 SUPERFAMILY SSF51735 4 279 1.38E-92 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS00030 680d4fc63bffa5b85291c9020d2753df 489 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 29 189 4.6E-39 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CJD35_RS00030 680d4fc63bffa5b85291c9020d2753df 489 SUPERFAMILY SSF48179 284 486 8.84E-50 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS00030 680d4fc63bffa5b85291c9020d2753df 489 Gene3D G3DSA:3.40.50.720 2 281 6.4E-107 T 28-03-2018 CJD35_RS16625 135337cfc425fb83917ea0f0b7ddbdda 752 Pfam PF00884 Sulfatase 34 447 6.3E-75 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CJD35_RS16625 135337cfc425fb83917ea0f0b7ddbdda 752 SUPERFAMILY SSF49899 593 743 8.87E-6 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CJD35_RS16625 135337cfc425fb83917ea0f0b7ddbdda 752 ProSitePatterns PS00523 Sulfatases signature 1. 78 90 - T 28-03-2018 IPR024607 Sulfatase, conserved site CJD35_RS16625 135337cfc425fb83917ea0f0b7ddbdda 752 SUPERFAMILY SSF53649 33 558 8.0E-123 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJD35_RS16625 135337cfc425fb83917ea0f0b7ddbdda 752 Gene3D G3DSA:3.30.1120.10 476 571 6.8E-13 T 28-03-2018 CJD35_RS16625 135337cfc425fb83917ea0f0b7ddbdda 752 Gene3D G3DSA:3.40.720.10 31 475 4.8E-93 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJD35_RS16625 135337cfc425fb83917ea0f0b7ddbdda 752 Gene3D G3DSA:2.60.120.200 583 746 2.1E-9 T 28-03-2018 CJD35_RS02040 8f4d509182240e0a1b0016b5bc969546 209 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 18 206 5.9E-44 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CJD35_RS02040 8f4d509182240e0a1b0016b5bc969546 209 Gene3D G3DSA:3.90.950.10 2 208 6.6E-75 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CJD35_RS02040 8f4d509182240e0a1b0016b5bc969546 209 Pfam PF01725 Ham1 family 19 206 4.9E-51 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CJD35_RS02040 8f4d509182240e0a1b0016b5bc969546 209 SUPERFAMILY SSF52972 12 207 5.23E-64 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CJD35_RS02040 8f4d509182240e0a1b0016b5bc969546 209 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 17 207 40.906 T 28-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 CJD35_RS14160 5cbac09de5095ca04ae294a8ebebec95 457 SUPERFAMILY SSF53187 200 449 1.8E-51 T 28-03-2018 CJD35_RS14160 5cbac09de5095ca04ae294a8ebebec95 457 Gene3D G3DSA:3.40.630.10 237 450 4.8E-35 T 28-03-2018 CJD35_RS14160 5cbac09de5095ca04ae294a8ebebec95 457 Gene3D G3DSA:3.40.630.10 29 113 0.0024 T 28-03-2018 CJD35_RS14160 5cbac09de5095ca04ae294a8ebebec95 457 Gene3D G3DSA:3.50.30.30 114 236 1.6E-16 T 28-03-2018 CJD35_RS14160 5cbac09de5095ca04ae294a8ebebec95 457 Pfam PF04389 Peptidase family M28 257 441 6.6E-28 T 28-03-2018 IPR007484 Peptidase M28 CJD35_RS14600 163a22e1ffdf02b118e7e6c6976c1460 98 Pfam PF01817 Chorismate mutase type II 13 89 1.1E-14 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CJD35_RS14600 163a22e1ffdf02b118e7e6c6976c1460 98 SMART SM00830 13 92 7.7E-22 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CJD35_RS14600 163a22e1ffdf02b118e7e6c6976c1460 98 SUPERFAMILY SSF48600 2 91 1.68E-21 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CJD35_RS14600 163a22e1ffdf02b118e7e6c6976c1460 98 Gene3D G3DSA:1.20.59.10 1 97 5.7E-21 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CJD35_RS14600 163a22e1ffdf02b118e7e6c6976c1460 98 PIRSF PIRSF029775 1 98 1.0E-33 T 28-03-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CJD35_RS12170 45e98ff9bcb96ae24659988020e1e2dd 244 Pfam PF02565 Recombination protein O C terminal 89 218 1.1E-18 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CJD35_RS12170 45e98ff9bcb96ae24659988020e1e2dd 244 Hamap MF_00201 DNA repair protein RecO [recO]. 2 239 15.258 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CJD35_RS12170 45e98ff9bcb96ae24659988020e1e2dd 244 SUPERFAMILY SSF50249 2 71 1.06E-5 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS12170 45e98ff9bcb96ae24659988020e1e2dd 244 Gene3D G3DSA:2.40.50.140 2 79 7.4E-12 T 28-03-2018 CJD35_RS12170 45e98ff9bcb96ae24659988020e1e2dd 244 SUPERFAMILY SSF57863 94 176 9.15E-8 T 28-03-2018 CJD35_RS12170 45e98ff9bcb96ae24659988020e1e2dd 244 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 177 1.3E-17 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CJD35_RS12170 45e98ff9bcb96ae24659988020e1e2dd 244 Pfam PF11967 Recombination protein O N terminal 1 76 1.6E-12 T 28-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CJD35_RS13000 edc9a473033871c267e6b03bd8fd807b 312 SUPERFAMILY SSF53474 32 307 5.46E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS13000 edc9a473033871c267e6b03bd8fd807b 312 Gene3D G3DSA:3.40.50.1820 11 311 3.9E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 261 2.4E-56 T 28-03-2018 CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 Gene3D G3DSA:3.40.50.720 1 261 1.8E-68 T 28-03-2018 CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 8 263 1.3E-112 T 28-03-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 SUPERFAMILY SSF51735 7 262 3.56E-77 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS09895 aa9e4c1105c9e4c73356468300eeb143 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS19605 708c03c2c41686430a7848904128d465 211 SUPERFAMILY SSF46689 25 96 5.99E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS19605 708c03c2c41686430a7848904128d465 211 Gene3D G3DSA:1.10.357.10 87 208 5.9E-5 T 28-03-2018 CJD35_RS19605 708c03c2c41686430a7848904128d465 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 82 1.1E-19 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS19605 708c03c2c41686430a7848904128d465 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 48 78 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJD35_RS19605 708c03c2c41686430a7848904128d465 211 Gene3D G3DSA:1.10.10.60 3 57 1.6E-19 T 28-03-2018 CJD35_RS19605 708c03c2c41686430a7848904128d465 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 57 80 6.3E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS19605 708c03c2c41686430a7848904128d465 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 49 6.3E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS19605 708c03c2c41686430a7848904128d465 211 Gene3D G3DSA:1.10.260.40 58 86 6.3E-14 T 28-03-2018 CJD35_RS15120 1bcf1bce1e43fb34d7d4271df84385c2 94 SUPERFAMILY SSF56935 8 94 7.78E-12 T 28-03-2018 CJD35_RS15120 1bcf1bce1e43fb34d7d4271df84385c2 94 Gene3D G3DSA:2.40.170.20 3 94 1.7E-10 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15120 1bcf1bce1e43fb34d7d4271df84385c2 94 Pfam PF00593 TonB dependent receptor 19 93 1.3E-7 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS12930 99af2dce28a661dc881f717cb32dd6fd 279 Pfam PF00717 Peptidase S24-like 34 120 1.8E-18 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS12930 99af2dce28a661dc881f717cb32dd6fd 279 ProSitePatterns PS00761 Signal peptidases I signature 3. 212 225 - T 28-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CJD35_RS12930 99af2dce28a661dc881f717cb32dd6fd 279 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 19 254 3.3E-43 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJD35_RS12930 99af2dce28a661dc881f717cb32dd6fd 279 Gene3D G3DSA:2.10.109.10 23 275 1.9E-50 T 28-03-2018 CJD35_RS12930 99af2dce28a661dc881f717cb32dd6fd 279 SUPERFAMILY SSF51306 25 276 4.13E-58 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS12930 99af2dce28a661dc881f717cb32dd6fd 279 ProSitePatterns PS00760 Signal peptidases I lysine active site. 99 111 - T 28-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CJD35_RS12930 99af2dce28a661dc881f717cb32dd6fd 279 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 97 109 3.7E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJD35_RS12930 99af2dce28a661dc881f717cb32dd6fd 279 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 27 43 3.7E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJD35_RS12930 99af2dce28a661dc881f717cb32dd6fd 279 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 207 226 3.7E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CJD35_RS09815 2f3c8e2269584abe77617810c27a7133 198 TIGRFAM TIGR00615 recR: recombination protein RecR 3 195 1.0E-61 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CJD35_RS09815 2f3c8e2269584abe77617810c27a7133 198 SMART SM00493 79 164 0.0029 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS09815 2f3c8e2269584abe77617810c27a7133 198 Gene3D G3DSA:3.40.1360.10 76 169 1.6E-30 T 28-03-2018 CJD35_RS09815 2f3c8e2269584abe77617810c27a7133 198 SUPERFAMILY SSF111304 3 197 1.7E-67 T 28-03-2018 IPR023627 Recombination protein RecR CJD35_RS09815 2f3c8e2269584abe77617810c27a7133 198 ProSitePatterns PS01300 RecR protein signature. 56 77 - T 28-03-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CJD35_RS09815 2f3c8e2269584abe77617810c27a7133 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 92.472 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CJD35_RS09815 2f3c8e2269584abe77617810c27a7133 198 Pfam PF02132 RecR protein 40 77 1.0E-12 T 28-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CJD35_RS09815 2f3c8e2269584abe77617810c27a7133 198 Pfam PF13662 Toprim domain 80 170 1.6E-22 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS06850 142585afd1fc07e2a9f31b33e3cb32f2 229 Gene3D G3DSA:1.20.1290.10 119 220 7.7E-13 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CJD35_RS06850 142585afd1fc07e2a9f31b33e3cb32f2 229 SUPERFAMILY SSF69118 5 218 1.17E-26 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CJD35_RS06850 142585afd1fc07e2a9f31b33e3cb32f2 229 Pfam PF02627 Carboxymuconolactone decarboxylase family 139 214 7.6E-10 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CJD35_RS06850 142585afd1fc07e2a9f31b33e3cb32f2 229 Gene3D G3DSA:1.20.1290.10 2 118 1.7E-5 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CJD35_RS14850 7b675c1a09740f7c812073d2ef524812 158 Pfam PF03449 Transcription elongation factor, N-terminal 8 76 8.0E-27 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CJD35_RS14850 7b675c1a09740f7c812073d2ef524812 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CJD35_RS14850 7b675c1a09740f7c812073d2ef524812 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 156 30.091 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CJD35_RS14850 7b675c1a09740f7c812073d2ef524812 158 SUPERFAMILY SSF46557 5 79 1.83E-24 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CJD35_RS14850 7b675c1a09740f7c812073d2ef524812 158 Gene3D G3DSA:3.10.50.30 79 158 1.1E-25 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJD35_RS14850 7b675c1a09740f7c812073d2ef524812 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 4.9E-26 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJD35_RS14850 7b675c1a09740f7c812073d2ef524812 158 SUPERFAMILY SSF54534 83 156 2.88E-21 T 28-03-2018 CJD35_RS14850 7b675c1a09740f7c812073d2ef524812 158 PIRSF PIRSF006092 1 157 6.9E-49 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CJD35_RS14850 7b675c1a09740f7c812073d2ef524812 158 Gene3D G3DSA:1.10.287.180 6 78 4.9E-28 T 28-03-2018 CJD35_RS14850 7b675c1a09740f7c812073d2ef524812 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 155 2.7E-54 T 28-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CJD35_RS04350 7441b2aa52185843a0250a36b32dfb52 98 Pfam PF01909 Nucleotidyltransferase domain 16 85 1.4E-10 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CJD35_RS04350 7441b2aa52185843a0250a36b32dfb52 98 Gene3D G3DSA:3.30.460.10 1 97 1.8E-15 T 28-03-2018 CJD35_RS04350 7441b2aa52185843a0250a36b32dfb52 98 SUPERFAMILY SSF81301 2 97 4.44E-18 T 28-03-2018 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 PIRSF PIRSF000497 1 399 6.5E-151 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 SUPERFAMILY SSF55973 121 244 1.29E-38 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 Gene3D G3DSA:3.30.300.10 150 271 8.9E-35 T 28-03-2018 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 246 387 4.2E-62 T 28-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 111 5.3E-36 T 28-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 SUPERFAMILY SSF55973 246 397 2.08E-62 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 SUPERFAMILY SSF55973 4 119 1.84E-36 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 Pfam PF02772 S-adenosylmethionine synthetase, central domain 125 244 3.6E-34 T 28-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 397 6.6E-141 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 Gene3D G3DSA:3.30.300.10 272 399 9.5E-43 T 28-03-2018 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 272 280 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 Gene3D G3DSA:3.30.300.10 12 148 4.2E-39 T 28-03-2018 CJD35_RS00435 d24d662e1b850468604dc38793224a1f 399 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 126 136 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CJD35_RS21380 a878c3d12677220086fead8aea1ec0fd 126 Gene3D G3DSA:3.10.450.50 1 126 1.3E-22 T 28-03-2018 CJD35_RS21380 a878c3d12677220086fead8aea1ec0fd 126 SUPERFAMILY SSF54427 1 122 4.39E-25 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS21380 a878c3d12677220086fead8aea1ec0fd 126 Pfam PF14534 Domain of unknown function (DUF4440) 7 115 4.3E-20 T 28-03-2018 IPR027843 Domain of unknown function DUF4440 CJD35_RS18260 a878c3d12677220086fead8aea1ec0fd 126 Gene3D G3DSA:3.10.450.50 1 126 1.3E-22 T 28-03-2018 CJD35_RS18260 a878c3d12677220086fead8aea1ec0fd 126 SUPERFAMILY SSF54427 1 122 4.39E-25 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS18260 a878c3d12677220086fead8aea1ec0fd 126 Pfam PF14534 Domain of unknown function (DUF4440) 7 115 4.3E-20 T 28-03-2018 IPR027843 Domain of unknown function DUF4440 CJD35_RS02065 3c3dc7af3ef1a0c9c284626bcf404745 413 SUPERFAMILY SSF53686 4 394 1.57E-88 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS02065 3c3dc7af3ef1a0c9c284626bcf404745 413 Gene3D G3DSA:3.40.50.1100 207 396 6.7E-38 T 28-03-2018 CJD35_RS02065 3c3dc7af3ef1a0c9c284626bcf404745 413 Gene3D G3DSA:3.40.50.1100 98 206 2.3E-21 T 28-03-2018 CJD35_RS02065 3c3dc7af3ef1a0c9c284626bcf404745 413 TIGRFAM TIGR00260 thrC: threonine synthase 68 382 2.6E-50 T 28-03-2018 IPR004450 Threonine synthase-like CJD35_RS02065 3c3dc7af3ef1a0c9c284626bcf404745 413 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 111 125 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CJD35_RS02065 3c3dc7af3ef1a0c9c284626bcf404745 413 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 84 387 7.1E-68 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS08140 2791891c1101fa827d87b1e8b9a39926 336 Gene3D G3DSA:3.10.580.10 213 335 2.8E-21 T 28-03-2018 CJD35_RS08140 2791891c1101fa827d87b1e8b9a39926 336 Gene3D G3DSA:3.40.50.10490 16 212 6.8E-44 T 28-03-2018 CJD35_RS08140 2791891c1101fa827d87b1e8b9a39926 336 Pfam PF00571 CBS domain 281 333 6.1E-7 T 28-03-2018 IPR000644 CBS domain CJD35_RS08140 2791891c1101fa827d87b1e8b9a39926 336 Pfam PF00571 CBS domain 215 270 1.5E-6 T 28-03-2018 IPR000644 CBS domain CJD35_RS08140 2791891c1101fa827d87b1e8b9a39926 336 PIRSF PIRSF004692 6 336 3.4E-114 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CJD35_RS08140 2791891c1101fa827d87b1e8b9a39926 336 SMART SM00116 224 272 0.11 T 28-03-2018 IPR000644 CBS domain CJD35_RS08140 2791891c1101fa827d87b1e8b9a39926 336 SMART SM00116 288 335 16.0 T 28-03-2018 IPR000644 CBS domain CJD35_RS08140 2791891c1101fa827d87b1e8b9a39926 336 Pfam PF01380 SIS domain 59 186 5.4E-24 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CJD35_RS08140 2791891c1101fa827d87b1e8b9a39926 336 SUPERFAMILY SSF53697 43 336 1.62E-54 T 28-03-2018 CJD35_RS08140 2791891c1101fa827d87b1e8b9a39926 336 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 60 326 1.4E-89 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CJD35_RS01000 66a3eef3b23c3f31730b475f1c441a1b 221 Gene3D G3DSA:3.40.50.2300 1 119 6.2E-32 T 28-03-2018 CJD35_RS01000 66a3eef3b23c3f31730b475f1c441a1b 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.3E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS01000 66a3eef3b23c3f31730b475f1c441a1b 221 SUPERFAMILY SSF52172 1 118 2.99E-37 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS01000 66a3eef3b23c3f31730b475f1c441a1b 221 SUPERFAMILY SSF46894 119 217 1.22E-27 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS01000 66a3eef3b23c3f31730b475f1c441a1b 221 Gene3D G3DSA:1.10.10.10 120 221 1.9E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS01000 66a3eef3b23c3f31730b475f1c441a1b 221 SMART SM00448 1 112 7.7E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS01000 66a3eef3b23c3f31730b475f1c441a1b 221 SMART SM00862 145 216 1.6E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS01000 66a3eef3b23c3f31730b475f1c441a1b 221 Pfam PF00072 Response regulator receiver domain 4 112 3.2E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 184 736 2.2E-114 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 Pfam PF13185 GAF domain 30 160 2.0E-13 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 Pfam PF05524 PEP-utilising enzyme, N-terminal 184 303 3.8E-21 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 Gene3D G3DSA:3.30.450.40 5 169 1.8E-25 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 SUPERFAMILY SSF47831 200 320 2.75E-26 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 Gene3D G3DSA:3.20.20.60 433 753 1.2E-81 T 28-03-2018 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 SUPERFAMILY SSF52009 302 422 3.53E-24 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 8.5E-16 T 28-03-2018 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 646 661 8.5E-16 T 28-03-2018 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 471 490 8.5E-16 T 28-03-2018 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 682 694 8.5E-16 T 28-03-2018 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 Gene3D G3DSA:1.10.274.10 203 314 3.0E-27 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 Pfam PF00391 PEP-utilising enzyme, mobile domain 331 402 1.3E-14 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 SUPERFAMILY SSF51621 428 731 4.71E-89 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 629 647 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 SMART SM00065 25 170 6.3E-15 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 429 722 7.5E-87 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 SUPERFAMILY SSF55781 10 167 3.05E-26 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS09430 21bbea57ff91ad07085718333cac2bef 758 Gene3D G3DSA:3.50.30.10 315 432 5.3E-19 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CJD35_RS18100 ed814efa886465e7d3ae1842cf420a21 97 Gene3D G3DSA:2.60.120.10 5 97 2.4E-28 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS18100 ed814efa886465e7d3ae1842cf420a21 97 Pfam PF09313 Domain of unknown function (DUF1971) 13 91 3.8E-24 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 CJD35_RS18100 ed814efa886465e7d3ae1842cf420a21 97 SUPERFAMILY SSF51197 4 95 1.18E-25 T 28-03-2018 CJD35_RS21220 ed814efa886465e7d3ae1842cf420a21 97 Gene3D G3DSA:2.60.120.10 5 97 2.4E-28 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS21220 ed814efa886465e7d3ae1842cf420a21 97 Pfam PF09313 Domain of unknown function (DUF1971) 13 91 3.8E-24 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 CJD35_RS21220 ed814efa886465e7d3ae1842cf420a21 97 SUPERFAMILY SSF51197 4 95 1.18E-25 T 28-03-2018 CJD35_RS00760 3c723845745a6a5f5289843b5cc97f9c 379 Gene3D G3DSA:1.10.287.90 30 115 5.3E-18 T 28-03-2018 CJD35_RS00760 3c723845745a6a5f5289843b5cc97f9c 379 Pfam PF06481 COX Aromatic Rich Motif 249 294 2.0E-16 T 28-03-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 CJD35_RS00760 3c723845745a6a5f5289843b5cc97f9c 379 SUPERFAMILY SSF49503 133 290 3.76E-48 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS00760 3c723845745a6a5f5289843b5cc97f9c 379 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 160 232 4.7E-6 T 28-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS00760 3c723845745a6a5f5289843b5cc97f9c 379 Gene3D G3DSA:2.60.40.420 124 290 6.9E-50 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS00760 3c723845745a6a5f5289843b5cc97f9c 379 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 22 249 4.4E-100 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CJD35_RS00760 3c723845745a6a5f5289843b5cc97f9c 379 SUPERFAMILY SSF81464 32 119 1.64E-21 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS15760 640e19e1d8683074615cba99405c0b16 278 Pfam PF00106 short chain dehydrogenase 21 211 1.4E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15760 640e19e1d8683074615cba99405c0b16 278 Gene3D G3DSA:3.40.50.720 15 250 2.0E-28 T 28-03-2018 CJD35_RS15760 640e19e1d8683074615cba99405c0b16 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 94 105 5.4E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15760 640e19e1d8683074615cba99405c0b16 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 5.4E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15760 640e19e1d8683074615cba99405c0b16 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 5.4E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15760 640e19e1d8683074615cba99405c0b16 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 5.4E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15760 640e19e1d8683074615cba99405c0b16 278 SUPERFAMILY SSF51735 18 238 3.8E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06780 cc36dc7825f4612d385831c72066d086 129 Gene3D G3DSA:3.30.420.80 5 129 2.8E-45 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CJD35_RS06780 cc36dc7825f4612d385831c72066d086 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 28-03-2018 IPR018102 Ribosomal S11, conserved site CJD35_RS06780 cc36dc7825f4612d385831c72066d086 129 PIRSF PIRSF002131 1 129 1.4E-52 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CJD35_RS06780 cc36dc7825f4612d385831c72066d086 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.9E-56 T 28-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS06780 cc36dc7825f4612d385831c72066d086 129 Pfam PF00411 Ribosomal protein S11 19 128 2.3E-49 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CJD35_RS06780 cc36dc7825f4612d385831c72066d086 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 9 129 32.351 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CJD35_RS06780 cc36dc7825f4612d385831c72066d086 129 SUPERFAMILY SSF53137 14 129 1.18E-47 T 28-03-2018 CJD35_RS13870 6cefe62c30c2d3d7d4602d48a37a0740 260 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS13870 6cefe62c30c2d3d7d4602d48a37a0740 260 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 238 32.722 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS13870 6cefe62c30c2d3d7d4602d48a37a0740 260 Gene3D G3DSA:3.30.470.20 94 224 4.0E-46 T 28-03-2018 CJD35_RS13870 6cefe62c30c2d3d7d4602d48a37a0740 260 Pfam PF01259 SAICAR synthetase 7 235 5.2E-64 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS13870 6cefe62c30c2d3d7d4602d48a37a0740 260 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CJD35_RS13870 6cefe62c30c2d3d7d4602d48a37a0740 260 SUPERFAMILY SSF56104 13 238 5.56E-79 T 28-03-2018 CJD35_RS13870 6cefe62c30c2d3d7d4602d48a37a0740 260 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 237 2.2E-67 T 28-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CJD35_RS13870 6cefe62c30c2d3d7d4602d48a37a0740 260 Gene3D G3DSA:3.30.200.20 1 93 2.4E-27 T 28-03-2018 CJD35_RS16795 a1cb0100f695ee2fdc98013dfc8ce992 293 Pfam PF04909 Amidohydrolase 24 286 5.8E-42 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS16795 a1cb0100f695ee2fdc98013dfc8ce992 293 SUPERFAMILY SSF51556 20 286 1.11E-63 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS16795 a1cb0100f695ee2fdc98013dfc8ce992 293 Gene3D G3DSA:3.20.20.140 1 292 2.3E-42 T 28-03-2018 CJD35_RS04135 9c0e6a7a55da349b25475b2dbf4a61b7 240 SUPERFAMILY SSF81342 11 237 1.96E-34 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CJD35_RS04135 9c0e6a7a55da349b25475b2dbf4a61b7 240 Pfam PF01292 Prokaryotic cytochrome b561 15 231 4.3E-42 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CJD35_RS04135 9c0e6a7a55da349b25475b2dbf4a61b7 240 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 195 217 8.0E-6 T 28-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CJD35_RS04135 9c0e6a7a55da349b25475b2dbf4a61b7 240 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 18 41 8.0E-6 T 28-03-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0006810|GO:0009055|GO:0016020 CJD35_RS04135 9c0e6a7a55da349b25475b2dbf4a61b7 240 Gene3D G3DSA:1.20.950.20 7 239 1.0E-46 T 28-03-2018 CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 3.1E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 Gene3D G3DSA:3.40.50.2300 2 114 2.6E-27 T 28-03-2018 CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 SMART SM00448 5 116 6.7E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 Gene3D G3DSA:1.10.10.10 115 196 3.2E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 Pfam PF00072 Response regulator receiver domain 7 116 1.2E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 SUPERFAMILY SSF52172 6 137 6.12E-31 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 SMART SM00421 140 197 4.8E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS21195 ddf89e50a507a3e79ffa276a97c87071 203 SUPERFAMILY SSF46894 132 197 8.84E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 197 3.1E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 Gene3D G3DSA:3.40.50.2300 2 114 2.6E-27 T 28-03-2018 CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 SMART SM00448 5 116 6.7E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 Gene3D G3DSA:1.10.10.10 115 196 3.2E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 Pfam PF00072 Response regulator receiver domain 7 116 1.2E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 SUPERFAMILY SSF52172 6 137 6.12E-31 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 SMART SM00421 140 197 4.8E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS18075 ddf89e50a507a3e79ffa276a97c87071 203 SUPERFAMILY SSF46894 132 197 8.84E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 PIRSF PIRSF000171 3 590 6.5E-34 T 28-03-2018 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 13 600 2.8E-236 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 Gene3D G3DSA:1.20.58.100 448 551 8.3E-34 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 SUPERFAMILY SSF56425 240 358 9.42E-40 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 Pfam PF02910 Fumarate reductase flavoprotein C-term 463 600 7.3E-44 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 10 600 4.1E-286 T 28-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 Gene3D G3DSA:3.50.50.60 2 310 9.2E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 SUPERFAMILY SSF51905 362 438 4.1E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 SUPERFAMILY SSF51905 5 263 4.1E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 SUPERFAMILY SSF46977 454 600 1.23E-48 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 Gene3D G3DSA:4.10.80.40 552 600 4.7E-23 T 28-03-2018 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 47 56 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 Pfam PF00890 FAD binding domain 13 408 3.5E-121 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01970 5b7679d87e40376a773964e5c7315877 600 Gene3D G3DSA:3.50.50.60 311 420 2.1E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17215 16fe63f4b07608ea3ac30d93766085c1 275 Pfam PF00117 Glutamine amidotransferase class-I 59 200 2.8E-12 T 28-03-2018 IPR017926 Glutamine amidotransferase CJD35_RS17215 16fe63f4b07608ea3ac30d93766085c1 275 SUPERFAMILY SSF52317 48 233 1.51E-30 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS17215 16fe63f4b07608ea3ac30d93766085c1 275 Gene3D G3DSA:3.40.50.880 10 239 7.5E-29 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS19725 1f083399df86fd09dbd305b409c64853 278 Pfam PF06586 TraK protein 33 259 1.6E-56 T 28-03-2018 IPR010563 Pilus assembly TraK CJD35_RS15465 98760115fe4e9b1026b26c391e4d347f 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 4.7E-9 T 28-03-2018 CJD35_RS15465 98760115fe4e9b1026b26c391e4d347f 551 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.7E-9 T 28-03-2018 CJD35_RS15465 98760115fe4e9b1026b26c391e4d347f 551 Gene3D G3DSA:3.50.50.60 2 405 5.2E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15465 98760115fe4e9b1026b26c391e4d347f 551 Gene3D G3DSA:3.50.50.60 406 546 4.2E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15465 98760115fe4e9b1026b26c391e4d347f 551 SUPERFAMILY SSF51905 488 548 5.77E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15465 98760115fe4e9b1026b26c391e4d347f 551 SUPERFAMILY SSF51905 2 132 5.77E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15465 98760115fe4e9b1026b26c391e4d347f 551 SUPERFAMILY SSF51905 214 312 5.77E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15465 98760115fe4e9b1026b26c391e4d347f 551 SUPERFAMILY SSF56425 331 489 2.83E-27 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS15465 98760115fe4e9b1026b26c391e4d347f 551 Pfam PF00890 FAD binding domain 5 529 4.9E-87 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS04100 55b060a3c8930e03adb59a0acaa76fa5 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 2 347 2.0E-53 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CJD35_RS04100 55b060a3c8930e03adb59a0acaa76fa5 357 Gene3D G3DSA:3.40.50.300 1 348 2.1E-22 T 28-03-2018 CJD35_RS04100 55b060a3c8930e03adb59a0acaa76fa5 357 SUPERFAMILY SSF52540 1 340 1.0E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04100 55b060a3c8930e03adb59a0acaa76fa5 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 347 5.8E-13 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CJD35_RS04100 55b060a3c8930e03adb59a0acaa76fa5 357 ProSitePatterns PS00618 RecF protein signature 2. 297 315 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CJD35_RS04100 55b060a3c8930e03adb59a0acaa76fa5 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 79.809 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CJD35_RS04100 55b060a3c8930e03adb59a0acaa76fa5 357 ProSitePatterns PS00617 RecF protein signature 1. 114 134 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 SUPERFAMILY SSF51735 8 255 2.46E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 Gene3D G3DSA:3.40.50.720 1 45 1.0E-9 T 28-03-2018 CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 Gene3D G3DSA:3.40.50.720 46 265 2.0E-59 T 28-03-2018 CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 254 1.8E-60 T 28-03-2018 CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.6E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.6E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 2.6E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 4.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15805 e91e60faa64e4755f8495a35c4729357 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.4E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS14520 7df59de69b44df0a3c78739508a80bcd 183 SUPERFAMILY SSF50685 48 145 5.93E-10 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJD35_RS14520 7df59de69b44df0a3c78739508a80bcd 183 Pfam PF03330 Lytic transglycolase 54 141 1.0E-23 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJD35_RS14520 7df59de69b44df0a3c78739508a80bcd 183 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 54 146 7.1E-31 T 28-03-2018 IPR012997 Rare lipoprotein A CJD35_RS14520 7df59de69b44df0a3c78739508a80bcd 183 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 14 144 22.119 T 28-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CJD35_RS14520 7df59de69b44df0a3c78739508a80bcd 183 Gene3D G3DSA:2.40.40.10 37 148 4.9E-19 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJD35_RS16560 ce09b7d77d6cc3edc75f37f3473dba47 155 Pfam PF14352 Domain of unknown function (DUF4402) 34 154 3.6E-21 T 28-03-2018 IPR025514 Protein of unknown function DUF4402 CJD35_RS08970 ca39264ddbf5db83a1dd32a4900b9df0 365 Pfam PF07885 Ion channel 27 99 2.5E-9 T 28-03-2018 IPR013099 Potassium channel domain CJD35_RS08970 ca39264ddbf5db83a1dd32a4900b9df0 365 Gene3D G3DSA:3.40.50.720 115 238 5.0E-25 T 28-03-2018 CJD35_RS08970 ca39264ddbf5db83a1dd32a4900b9df0 365 Pfam PF02254 TrkA-N domain 124 239 1.4E-27 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CJD35_RS08970 ca39264ddbf5db83a1dd32a4900b9df0 365 SUPERFAMILY SSF116726 274 340 4.84E-7 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CJD35_RS08970 ca39264ddbf5db83a1dd32a4900b9df0 365 Gene3D G3DSA:3.30.70.1450 278 348 7.0E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CJD35_RS08970 ca39264ddbf5db83a1dd32a4900b9df0 365 SUPERFAMILY SSF51735 120 259 1.05E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS08970 ca39264ddbf5db83a1dd32a4900b9df0 365 Gene3D G3DSA:1.10.287.70 14 107 1.9E-9 T 28-03-2018 CJD35_RS08970 ca39264ddbf5db83a1dd32a4900b9df0 365 SUPERFAMILY SSF81324 15 142 3.14E-18 T 28-03-2018 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00385 P450 superfamily signature 285 296 3.2E-5 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00385 P450 superfamily signature 359 370 3.2E-5 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00385 P450 superfamily signature 350 359 3.2E-5 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00385 P450 superfamily signature 250 267 3.2E-5 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 Pfam PF00067 Cytochrome P450 282 377 8.0E-14 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 Gene3D G3DSA:1.10.630.10 20 408 2.3E-53 T 28-03-2018 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00359 B-class P450 signature 329 344 1.3E-25 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00359 B-class P450 signature 168 183 1.3E-25 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00359 B-class P450 signature 105 116 1.3E-25 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00359 B-class P450 signature 359 370 1.3E-25 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00359 B-class P450 signature 204 226 1.3E-25 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00359 B-class P450 signature 301 328 1.3E-25 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00359 B-class P450 signature 151 167 1.3E-25 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 PRINTS PR00359 B-class P450 signature 350 359 1.3E-25 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 352 361 - T 28-03-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 CJD35_RS06310 7baa2de235754e37426c10ec4e58ebc2 410 SUPERFAMILY SSF48264 37 408 1.7E-75 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 Pfam PF00694 Aconitase C-terminal domain 695 818 2.9E-41 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 SUPERFAMILY SSF52016 633 890 3.34E-83 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 ProSitePatterns PS01244 Aconitase family signature 2. 495 508 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 Pfam PF00330 Aconitase family (aconitate hydratase) 71 564 2.7E-177 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 Gene3D G3DSA:3.40.1060.10 243 375 4.9E-46 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 PRINTS PR00415 Aconitase family signature 433 444 2.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 PRINTS PR00415 Aconitase family signature 206 219 2.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 PRINTS PR00415 Aconitase family signature 220 235 2.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 PRINTS PR00415 Aconitase family signature 495 508 2.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 PRINTS PR00415 Aconitase family signature 172 180 2.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 PRINTS PR00415 Aconitase family signature 376 390 2.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 PRINTS PR00415 Aconitase family signature 148 161 2.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 PRINTS PR00415 Aconitase family signature 282 295 2.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 PRINTS PR00415 Aconitase family signature 296 309 2.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 SUPERFAMILY SSF53732 7 628 5.49E-216 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 Gene3D G3DSA:3.20.19.10 655 892 7.2E-85 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 ProSitePatterns PS00450 Aconitase family signature 1. 429 445 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 Gene3D G3DSA:3.30.499.10 376 578 1.7E-59 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 Gene3D G3DSA:3.30.499.10 42 242 8.3E-70 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS17040 2786eb35bd0a96d1218ab674e5ade948 892 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 21 890 0.0 T 28-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 CJD35_RS06970 ec353e24f4c28831a211e5819a6be705 396 Pfam PF00155 Aminotransferase class I and II 31 381 6.2E-54 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJD35_RS06970 ec353e24f4c28831a211e5819a6be705 396 Gene3D G3DSA:3.40.640.10 45 291 1.2E-54 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS06970 ec353e24f4c28831a211e5819a6be705 396 Gene3D G3DSA:3.90.1150.10 292 389 5.0E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS06970 ec353e24f4c28831a211e5819a6be705 396 SUPERFAMILY SSF53383 10 385 1.61E-96 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS05800 bf8dc9c72e718bb8ec0f5abc47fd1f2d 351 Gene3D G3DSA:3.40.47.10 201 347 8.5E-30 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS05800 bf8dc9c72e718bb8ec0f5abc47fd1f2d 351 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 5 211 1.2E-28 T 28-03-2018 IPR001099 Chalcone/stilbene synthase, N-terminal CJD35_RS05800 bf8dc9c72e718bb8ec0f5abc47fd1f2d 351 SUPERFAMILY SSF53901 198 347 3.28E-31 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS05800 bf8dc9c72e718bb8ec0f5abc47fd1f2d 351 PIRSF PIRSF000451 2 350 2.2E-90 T 28-03-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 CJD35_RS05800 bf8dc9c72e718bb8ec0f5abc47fd1f2d 351 Gene3D G3DSA:3.40.47.10 3 200 8.5E-22 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS05800 bf8dc9c72e718bb8ec0f5abc47fd1f2d 351 SUPERFAMILY SSF53901 5 213 2.62E-44 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS05800 bf8dc9c72e718bb8ec0f5abc47fd1f2d 351 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 223 347 1.0E-20 T 28-03-2018 IPR012328 Chalcone/stilbene synthase, C-terminal CJD35_RS08895 02f96f4660e35b7dba30b32ebe8037fe 334 SUPERFAMILY SSF52374 2 332 2.44E-89 T 28-03-2018 CJD35_RS08895 02f96f4660e35b7dba30b32ebe8037fe 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 1.2E-26 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CJD35_RS08895 02f96f4660e35b7dba30b32ebe8037fe 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 1.2E-26 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CJD35_RS08895 02f96f4660e35b7dba30b32ebe8037fe 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 197 207 1.2E-26 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CJD35_RS08895 02f96f4660e35b7dba30b32ebe8037fe 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 143 164 1.2E-26 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CJD35_RS08895 02f96f4660e35b7dba30b32ebe8037fe 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 332 2.6E-95 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CJD35_RS08895 02f96f4660e35b7dba30b32ebe8037fe 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS08895 02f96f4660e35b7dba30b32ebe8037fe 334 Gene3D G3DSA:3.40.50.620 1 203 5.1E-78 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS08895 02f96f4660e35b7dba30b32ebe8037fe 334 Pfam PF00579 tRNA synthetases class I (W and Y) 1 287 4.9E-72 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS08895 02f96f4660e35b7dba30b32ebe8037fe 334 Gene3D G3DSA:1.10.240.10 204 315 7.3E-26 T 28-03-2018 CJD35_RS08895 02f96f4660e35b7dba30b32ebe8037fe 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 333 38.531 T 28-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CJD35_RS10010 a67a5349f15fd5e02c7529d3076a1010 85 SUPERFAMILY SSF52833 1 84 4.27E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS10010 a67a5349f15fd5e02c7529d3076a1010 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 3.8E-35 T 28-03-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 CJD35_RS10010 a67a5349f15fd5e02c7529d3076a1010 85 Gene3D G3DSA:3.40.30.10 2 85 3.5E-28 T 28-03-2018 CJD35_RS10010 a67a5349f15fd5e02c7529d3076a1010 85 PRINTS PR00160 Glutaredoxin signature 47 60 2.3E-14 T 28-03-2018 IPR014025 Glutaredoxin subgroup CJD35_RS10010 a67a5349f15fd5e02c7529d3076a1010 85 PRINTS PR00160 Glutaredoxin signature 4 22 2.3E-14 T 28-03-2018 IPR014025 Glutaredoxin subgroup CJD35_RS10010 a67a5349f15fd5e02c7529d3076a1010 85 PRINTS PR00160 Glutaredoxin signature 61 74 2.3E-14 T 28-03-2018 IPR014025 Glutaredoxin subgroup CJD35_RS10010 a67a5349f15fd5e02c7529d3076a1010 85 Pfam PF00462 Glutaredoxin 4 64 8.3E-22 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CJD35_RS04640 4653eeb4ed7738bb7c391c8d52ef1011 643 SUPERFAMILY SSF50156 540 608 3.55E-7 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS04640 4653eeb4ed7738bb7c391c8d52ef1011 643 Gene3D G3DSA:2.30.42.10 530 615 1.4E-5 T 28-03-2018 CJD35_RS04640 4653eeb4ed7738bb7c391c8d52ef1011 643 Gene3D G3DSA:1.10.390.10 317 504 1.6E-13 T 28-03-2018 CJD35_RS04640 4653eeb4ed7738bb7c391c8d52ef1011 643 Pfam PF05299 M61 glycyl aminopeptidase 322 438 9.2E-36 T 28-03-2018 IPR007963 Peptidase M61, catalytic domain CJD35_RS04640 4653eeb4ed7738bb7c391c8d52ef1011 643 PIRSF PIRSF016493 52 642 2.0E-128 T 28-03-2018 IPR024191 Peptidase M61 CJD35_RS06030 61f4a581bc29e8a7244c818771d2f7f5 347 SUPERFAMILY SSF51395 1 346 4.89E-101 T 28-03-2018 CJD35_RS06030 61f4a581bc29e8a7244c818771d2f7f5 347 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 283 303 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CJD35_RS06030 61f4a581bc29e8a7244c818771d2f7f5 347 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 327 43.044 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CJD35_RS06030 61f4a581bc29e8a7244c818771d2f7f5 347 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 346 2.6E-116 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CJD35_RS06030 61f4a581bc29e8a7244c818771d2f7f5 347 Pfam PF01180 Dihydroorotate dehydrogenase 41 331 2.3E-87 T 28-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CJD35_RS06030 61f4a581bc29e8a7244c818771d2f7f5 347 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 76 95 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CJD35_RS06030 61f4a581bc29e8a7244c818771d2f7f5 347 Gene3D G3DSA:3.20.20.70 1 347 3.7E-85 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS06030 61f4a581bc29e8a7244c818771d2f7f5 347 PIRSF PIRSF000164 10 347 3.7E-99 T 28-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CJD35_RS19530 fb465295a99e66693edc4eede37ec304 158 Pfam PF05161 MOFRL family 41 146 7.1E-36 T 28-03-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 CJD35_RS19530 fb465295a99e66693edc4eede37ec304 158 Gene3D G3DSA:3.40.1480.10 2 156 3.6E-50 T 28-03-2018 IPR007835 MOFRL domain Reactome: R-HSA-70350 CJD35_RS19530 fb465295a99e66693edc4eede37ec304 158 SUPERFAMILY SSF82544 7 152 1.96E-47 T 28-03-2018 CJD35_RS21950 bb4ae451ed95ad54eeb2959efc3a7250 246 SUPERFAMILY SSF52540 2 236 7.83E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21950 bb4ae451ed95ad54eeb2959efc3a7250 246 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 217 1.5E-20 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CJD35_RS21950 bb4ae451ed95ad54eeb2959efc3a7250 246 Gene3D G3DSA:3.40.50.300 1 245 6.3E-39 T 28-03-2018 CJD35_RS02255 89c93c5a8267eaafade7163a50778b23 304 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 16 27 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS02255 89c93c5a8267eaafade7163a50778b23 304 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 10 289 1.3E-46 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CJD35_RS02255 89c93c5a8267eaafade7163a50778b23 304 Gene3D G3DSA:3.40.50.620 10 117 8.3E-34 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS02255 89c93c5a8267eaafade7163a50778b23 304 PRINTS PR00987 Glutamyl-tRNA synthetase signature 27 38 1.3E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS02255 89c93c5a8267eaafade7163a50778b23 304 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 55 1.3E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS02255 89c93c5a8267eaafade7163a50778b23 304 PRINTS PR00987 Glutamyl-tRNA synthetase signature 221 229 1.3E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS02255 89c93c5a8267eaafade7163a50778b23 304 PRINTS PR00987 Glutamyl-tRNA synthetase signature 205 215 1.3E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS02255 89c93c5a8267eaafade7163a50778b23 304 PRINTS PR00987 Glutamyl-tRNA synthetase signature 13 25 1.3E-14 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS02255 89c93c5a8267eaafade7163a50778b23 304 Gene3D G3DSA:3.40.50.620 118 257 1.5E-33 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS02255 89c93c5a8267eaafade7163a50778b23 304 SUPERFAMILY SSF52374 10 287 5.63E-82 T 28-03-2018 CJD35_RS10920 c01952cf6347131725763bc04ac1f121 498 SUPERFAMILY SSF53720 15 482 2.23E-135 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS10920 c01952cf6347131725763bc04ac1f121 498 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 15 481 8.7E-192 T 28-03-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00410+1.2.1.18|KEGG: 00562+1.2.1.18|KEGG: 00640+1.2.1.18+1.2.1.27|MetaCyc: PWY-5642|MetaCyc: PWY-6373|Reactome: R-HSA-70895 CJD35_RS10920 c01952cf6347131725763bc04ac1f121 498 Gene3D G3DSA:3.40.605.10 9 261 4.1E-74 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS10920 c01952cf6347131725763bc04ac1f121 498 Gene3D G3DSA:3.40.309.10 262 460 3.2E-58 T 28-03-2018 CJD35_RS10920 c01952cf6347131725763bc04ac1f121 498 Pfam PF00171 Aldehyde dehydrogenase family 17 477 3.3E-129 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS19710 6f4d50d1058e61b248dd8e1aa35e7f85 106 Pfam PF04956 TrbC/VIRB2 family 16 98 1.1E-7 T 28-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 Pfam PF06421 GTP-binding protein LepA C-terminus 491 596 1.7E-50 T 28-03-2018 IPR013842 GTP-binding protein LepA, C-terminal CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 SUPERFAMILY SSF52540 1 232 4.62E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 Gene3D G3DSA:2.40.30.10 195 290 6.2E-22 T 28-03-2018 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 Pfam PF00679 Elongation factor G C-terminus 403 488 3.5E-20 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 SUPERFAMILY SSF54980 403 497 8.63E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 PRINTS PR00315 GTP-binding elongation factor signature 52 60 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 PRINTS PR00315 GTP-binding elongation factor signature 129 138 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 PRINTS PR00315 GTP-binding elongation factor signature 93 104 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 PRINTS PR00315 GTP-binding elongation factor signature 77 87 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 PRINTS PR00315 GTP-binding elongation factor signature 9 22 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 Pfam PF03144 Elongation factor Tu domain 2 208 278 4.3E-7 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 178 1.3E-19 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 1.3E-52 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 Gene3D G3DSA:3.30.70.870 291 370 5.0E-30 T 28-03-2018 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 TIGRFAM TIGR01393 lepA: elongation factor 4 6 598 3.3E-293 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 Hamap MF_00071 Elongation factor 4 [lepA]. 1 601 305.408 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 Gene3D G3DSA:3.40.50.300 3 194 1.5E-35 T 28-03-2018 CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 SUPERFAMILY SSF54980 295 373 8.63E-19 T 28-03-2018 IPR035647 EF-G domain III/V-like CJD35_RS08675 98b93b21a056ec8d749194c88c9f1ac1 602 Gene3D G3DSA:3.30.70.240 395 553 3.5E-27 T 28-03-2018 CJD35_RS00085 e043c6ef4a3bc52440950eb6bd6263b1 217 Gene3D G3DSA:2.40.128.130 13 217 8.0E-22 T 28-03-2018 CJD35_RS00085 e043c6ef4a3bc52440950eb6bd6263b1 217 Pfam PF13505 Outer membrane protein beta-barrel domain 8 217 5.9E-22 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel CJD35_RS00085 e043c6ef4a3bc52440950eb6bd6263b1 217 SUPERFAMILY SSF56925 27 217 1.83E-23 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS03975 00b9df457e6efbc076ffe40a45e7ba90 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 19 363 38.702 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CJD35_RS03975 00b9df457e6efbc076ffe40a45e7ba90 373 Gene3D G3DSA:2.40.30.10 292 373 5.3E-18 T 28-03-2018 CJD35_RS03975 00b9df457e6efbc076ffe40a45e7ba90 373 Pfam PF03054 tRNA methyl transferase 20 362 2.2E-107 T 28-03-2018 CJD35_RS03975 00b9df457e6efbc076ffe40a45e7ba90 373 Gene3D G3DSA:2.30.30.280 232 291 5.0E-21 T 28-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 CJD35_RS03975 00b9df457e6efbc076ffe40a45e7ba90 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 20 362 3.4E-91 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CJD35_RS03975 00b9df457e6efbc076ffe40a45e7ba90 373 Gene3D G3DSA:3.40.50.620 12 227 5.0E-55 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS03975 00b9df457e6efbc076ffe40a45e7ba90 373 SUPERFAMILY SSF52402 19 261 1.63E-50 T 28-03-2018 CJD35_RS03080 61fc2218ca6258422b44baad168804ba 260 Pfam PF01311 Bacterial export proteins, family 1 14 244 2.9E-55 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CJD35_RS03080 61fc2218ca6258422b44baad168804ba 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 182 204 5.6E-18 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CJD35_RS03080 61fc2218ca6258422b44baad168804ba 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 5.6E-18 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CJD35_RS03080 61fc2218ca6258422b44baad168804ba 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 82 101 5.6E-18 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CJD35_RS03080 61fc2218ca6258422b44baad168804ba 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 204 223 5.6E-18 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CJD35_RS03080 61fc2218ca6258422b44baad168804ba 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 16 254 2.4E-54 T 28-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CJD35_RS00695 e46c5453d24b8bad8075db14349fefe1 1113 Gene3D G3DSA:2.60.40.1120 33 130 2.6E-9 T 28-03-2018 CJD35_RS00695 e46c5453d24b8bad8075db14349fefe1 1113 SUPERFAMILY SSF49452 26 109 6.08E-8 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 CJD35_RS00695 e46c5453d24b8bad8075db14349fefe1 1113 Pfam PF07715 TonB-dependent Receptor Plug Domain 134 239 1.1E-5 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS00695 e46c5453d24b8bad8075db14349fefe1 1113 Gene3D G3DSA:2.170.130.10 131 256 2.2E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS00695 e46c5453d24b8bad8075db14349fefe1 1113 Pfam PF13620 Carboxypeptidase regulatory-like domain 33 114 8.7E-14 T 28-03-2018 CJD35_RS00695 e46c5453d24b8bad8075db14349fefe1 1113 Gene3D G3DSA:2.40.170.20 277 1113 2.3E-49 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS00695 e46c5453d24b8bad8075db14349fefe1 1113 SUPERFAMILY SSF56935 740 789 2.05E-48 T 28-03-2018 CJD35_RS00695 e46c5453d24b8bad8075db14349fefe1 1113 SUPERFAMILY SSF56935 816 930 2.05E-48 T 28-03-2018 CJD35_RS00695 e46c5453d24b8bad8075db14349fefe1 1113 SUPERFAMILY SSF56935 995 1039 2.05E-48 T 28-03-2018 CJD35_RS00695 e46c5453d24b8bad8075db14349fefe1 1113 SUPERFAMILY SSF56935 364 675 2.05E-48 T 28-03-2018 CJD35_RS00695 e46c5453d24b8bad8075db14349fefe1 1113 SUPERFAMILY SSF56935 115 323 2.05E-48 T 28-03-2018 CJD35_RS14215 779a859d32d3ffeec581e8bb387ece5e 221 Pfam PF11612 Type II secretion system (T2SS), protein J 69 201 8.3E-36 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CJD35_RS14215 779a859d32d3ffeec581e8bb387ece5e 221 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 37 1.2E-7 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CJD35_RS14215 779a859d32d3ffeec581e8bb387ece5e 221 SUPERFAMILY SSF54523 52 209 3.45E-39 T 28-03-2018 CJD35_RS14215 779a859d32d3ffeec581e8bb387ece5e 221 Gene3D G3DSA:2.10.70.20 157 209 2.7E-12 T 28-03-2018 CJD35_RS14215 779a859d32d3ffeec581e8bb387ece5e 221 Gene3D G3DSA:3.10.610.10 49 154 8.2E-27 T 28-03-2018 CJD35_RS14215 779a859d32d3ffeec581e8bb387ece5e 221 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 18 193 4.2E-38 T 28-03-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 CJD35_RS14215 779a859d32d3ffeec581e8bb387ece5e 221 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 38 1.7E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CJD35_RS17525 0cf2884a59937e60f82268d88da865bb 154 ProSitePatterns PS00519 AsnC-type HTH domain signature. 23 49 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CJD35_RS17525 0cf2884a59937e60f82268d88da865bb 154 Gene3D G3DSA:1.10.10.10 1 57 2.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17525 0cf2884a59937e60f82268d88da865bb 154 SUPERFAMILY SSF54909 68 145 5.77E-18 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS17525 0cf2884a59937e60f82268d88da865bb 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 6.0E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS17525 0cf2884a59937e60f82268d88da865bb 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 6.0E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS17525 0cf2884a59937e60f82268d88da865bb 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 6.0E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS17525 0cf2884a59937e60f82268d88da865bb 154 Pfam PF13404 AsnC-type helix-turn-helix domain 6 46 3.0E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS17525 0cf2884a59937e60f82268d88da865bb 154 Gene3D G3DSA:3.30.70.920 64 142 3.0E-22 T 28-03-2018 CJD35_RS17525 0cf2884a59937e60f82268d88da865bb 154 SUPERFAMILY SSF46785 5 58 1.79E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17525 0cf2884a59937e60f82268d88da865bb 154 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 1.8E-22 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CJD35_RS17525 0cf2884a59937e60f82268d88da865bb 154 SMART SM00344 5 114 1.8E-33 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CJD35_RS10815 06d79d693f79e5a17f5c7eb8c590685f 247 SUPERFAMILY SSF52172 2 121 1.22E-27 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS10815 06d79d693f79e5a17f5c7eb8c590685f 247 Pfam PF00072 Response regulator receiver domain 6 114 1.2E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS10815 06d79d693f79e5a17f5c7eb8c590685f 247 Pfam PF04397 LytTr DNA-binding domain 150 243 2.4E-20 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CJD35_RS10815 06d79d693f79e5a17f5c7eb8c590685f 247 Gene3D G3DSA:2.40.50.40 140 209 1.2E-16 T 28-03-2018 CJD35_RS10815 06d79d693f79e5a17f5c7eb8c590685f 247 Gene3D G3DSA:3.40.50.2300 2 127 4.5E-26 T 28-03-2018 CJD35_RS10815 06d79d693f79e5a17f5c7eb8c590685f 247 SMART SM00850 149 246 6.0E-27 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CJD35_RS10815 06d79d693f79e5a17f5c7eb8c590685f 247 SMART SM00448 3 114 1.2E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS15890 5f68ffd60b3962c105c9130b1a65ac39 444 Pfam PF07969 Amidohydrolase family 1 426 2.5E-36 T 28-03-2018 IPR013108 Amidohydrolase 3 CJD35_RS15890 5f68ffd60b3962c105c9130b1a65ac39 444 Gene3D G3DSA:3.20.20.140 1 368 7.3E-25 T 28-03-2018 CJD35_RS15890 5f68ffd60b3962c105c9130b1a65ac39 444 SUPERFAMILY SSF51556 1 186 3.4E-38 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS15890 5f68ffd60b3962c105c9130b1a65ac39 444 SUPERFAMILY SSF51556 236 373 3.4E-38 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS15890 5f68ffd60b3962c105c9130b1a65ac39 444 SUPERFAMILY SSF51338 374 442 2.1E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS01525 61838f031d7c5a789c25648248ccacc3 309 Pfam PF00889 Elongation factor TS 71 289 1.8E-64 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS01525 61838f031d7c5a789c25648248ccacc3 309 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS01525 61838f031d7c5a789c25648248ccacc3 309 Hamap MF_00050 Elongation factor Ts [tsf]. 1 306 75.086 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS01525 61838f031d7c5a789c25648248ccacc3 309 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 305 4.7E-89 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS01525 61838f031d7c5a789c25648248ccacc3 309 SUPERFAMILY SSF54713 186 289 6.73E-43 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS01525 61838f031d7c5a789c25648248ccacc3 309 SUPERFAMILY SSF54713 57 92 6.73E-43 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS01525 61838f031d7c5a789c25648248ccacc3 309 Gene3D G3DSA:3.30.479.20 58 159 2.5E-21 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS01525 61838f031d7c5a789c25648248ccacc3 309 Gene3D G3DSA:3.30.479.20 160 305 2.4E-42 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS01525 61838f031d7c5a789c25648248ccacc3 309 Gene3D G3DSA:1.10.8.10 1 56 3.1E-24 T 28-03-2018 CJD35_RS01525 61838f031d7c5a789c25648248ccacc3 309 SUPERFAMILY SSF46934 4 55 1.09E-18 T 28-03-2018 IPR009060 UBA-like GO:0005515 CJD35_RS01525 61838f031d7c5a789c25648248ccacc3 309 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CJD35_RS05460 a3cfb5240b3ce2f27826cf022aac823a 211 SUPERFAMILY SSF161111 18 205 6.15E-39 T 28-03-2018 CJD35_RS05460 a3cfb5240b3ce2f27826cf022aac823a 211 Pfam PF01545 Cation efflux family 25 203 1.5E-14 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJD35_RS05460 a3cfb5240b3ce2f27826cf022aac823a 211 Gene3D G3DSA:1.20.1510.10 20 203 2.9E-24 T 28-03-2018 CJD35_RS21305 4f7b3c0bbb407a8809523fa18a556c8c 383 Gene3D G3DSA:2.120.10.30 24 380 7.9E-52 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS21305 4f7b3c0bbb407a8809523fa18a556c8c 383 Pfam PF03022 Major royal jelly protein 98 352 5.4E-37 T 28-03-2018 IPR017996 Major royal jelly protein/protein yellow CJD35_RS21305 4f7b3c0bbb407a8809523fa18a556c8c 383 SUPERFAMILY SSF101898 234 346 1.26E-21 T 28-03-2018 CJD35_RS21305 4f7b3c0bbb407a8809523fa18a556c8c 383 SUPERFAMILY SSF101898 32 203 1.26E-21 T 28-03-2018 CJD35_RS18185 4f7b3c0bbb407a8809523fa18a556c8c 383 Gene3D G3DSA:2.120.10.30 24 380 7.9E-52 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS18185 4f7b3c0bbb407a8809523fa18a556c8c 383 Pfam PF03022 Major royal jelly protein 98 352 5.4E-37 T 28-03-2018 IPR017996 Major royal jelly protein/protein yellow CJD35_RS18185 4f7b3c0bbb407a8809523fa18a556c8c 383 SUPERFAMILY SSF101898 234 346 1.26E-21 T 28-03-2018 CJD35_RS18185 4f7b3c0bbb407a8809523fa18a556c8c 383 SUPERFAMILY SSF101898 32 203 1.26E-21 T 28-03-2018 CJD35_RS15915 1a9c4fbf6a8448fe4d6118eb186dce77 295 Gene3D G3DSA:2.60.120.280 66 175 5.6E-8 T 28-03-2018 CJD35_RS15915 1a9c4fbf6a8448fe4d6118eb186dce77 295 SUPERFAMILY SSF46689 241 290 6.72E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS15915 1a9c4fbf6a8448fe4d6118eb186dce77 295 SUPERFAMILY SSF51215 73 171 7.98E-5 T 28-03-2018 CJD35_RS15915 1a9c4fbf6a8448fe4d6118eb186dce77 295 Gene3D G3DSA:1.10.10.60 188 241 1.3E-12 T 28-03-2018 CJD35_RS15915 1a9c4fbf6a8448fe4d6118eb186dce77 295 SMART SM00342 205 288 8.7E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS15915 1a9c4fbf6a8448fe4d6118eb186dce77 295 SUPERFAMILY SSF46689 189 238 1.61E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS15915 1a9c4fbf6a8448fe4d6118eb186dce77 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 288 4.4E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS15915 1a9c4fbf6a8448fe4d6118eb186dce77 295 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 272 4.4E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS15915 1a9c4fbf6a8448fe4d6118eb186dce77 295 Pfam PF12833 Helix-turn-helix domain 211 289 4.9E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS15915 1a9c4fbf6a8448fe4d6118eb186dce77 295 Gene3D G3DSA:1.10.10.60 242 295 1.5E-15 T 28-03-2018 CJD35_RS09810 0192c20481dd44c9afa7df455a97b432 302 Pfam PF02911 Formyl transferase, C-terminal domain 200 292 4.2E-23 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJD35_RS09810 0192c20481dd44c9afa7df455a97b432 302 Gene3D G3DSA:3.10.25.10 203 302 4.2E-26 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJD35_RS09810 0192c20481dd44c9afa7df455a97b432 302 SUPERFAMILY SSF50486 201 299 1.37E-26 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CJD35_RS09810 0192c20481dd44c9afa7df455a97b432 302 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 1 295 7.0E-78 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CJD35_RS09810 0192c20481dd44c9afa7df455a97b432 302 SUPERFAMILY SSF53328 1 202 3.01E-62 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJD35_RS09810 0192c20481dd44c9afa7df455a97b432 302 Gene3D G3DSA:3.40.50.170 1 202 7.8E-66 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJD35_RS09810 0192c20481dd44c9afa7df455a97b432 302 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 295 34.499 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CJD35_RS09810 0192c20481dd44c9afa7df455a97b432 302 Pfam PF00551 Formyl transferase 1 179 6.5E-42 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CJD35_RS10675 cf76aa4565be1934cc59cac800be53d3 545 Pfam PF02254 TrkA-N domain 415 529 5.4E-21 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CJD35_RS10675 cf76aa4565be1934cc59cac800be53d3 545 Gene3D G3DSA:1.20.91.10 241 323 2.3E-7 T 28-03-2018 CJD35_RS10675 cf76aa4565be1934cc59cac800be53d3 545 SUPERFAMILY SSF51735 413 540 1.89E-25 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10675 cf76aa4565be1934cc59cac800be53d3 545 Gene3D G3DSA:3.40.50.720 407 529 2.6E-17 T 28-03-2018 CJD35_RS10675 cf76aa4565be1934cc59cac800be53d3 545 Pfam PF00999 Sodium/hydrogen exchanger family 11 386 1.3E-76 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CJD35_RS07860 86a1887cbdf7577d22f13f2d248df7c2 147 SUPERFAMILY SSF141322 90 145 6.93E-5 T 28-03-2018 CJD35_RS07860 86a1887cbdf7577d22f13f2d248df7c2 147 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 145 1.0E-22 T 28-03-2018 IPR002810 NfeD-like, C-terminal domain CJD35_RS07860 86a1887cbdf7577d22f13f2d248df7c2 147 Gene3D G3DSA:2.40.50.140 91 146 8.4E-12 T 28-03-2018 CJD35_RS01865 1f341236b1015bc1bb47de9ff220d6e8 181 Gene3D G3DSA:3.20.16.10 16 178 3.2E-33 T 28-03-2018 IPR035443 Herpesvirus/Caudovirus protease domain CJD35_RS01865 1f341236b1015bc1bb47de9ff220d6e8 181 Pfam PF04586 Caudovirus prohead serine protease 10 160 9.2E-41 T 28-03-2018 IPR006433 Prohead protease CJD35_RS01865 1f341236b1015bc1bb47de9ff220d6e8 181 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 22 156 1.8E-30 T 28-03-2018 IPR006433 Prohead protease CJD35_RS19285 6679a01f06d61f3ef5b9989330aee33e 456 SUPERFAMILY SSF53098 130 400 3.19E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS19285 6679a01f06d61f3ef5b9989330aee33e 456 Pfam PF13701 Transposase DDE domain group 1 19 454 1.1E-159 T 28-03-2018 IPR025668 Transposase DDE domain CJD35_RS19285 6679a01f06d61f3ef5b9989330aee33e 456 Gene3D G3DSA:3.90.350.10 159 373 1.5E-12 T 28-03-2018 IPR014736 Transposase, Tn5-like, core CJD35_RS17230 4e7c7a0bfd56923787a3f34c647b594d 218 SUPERFAMILY SSF51905 34 218 2.65E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17230 4e7c7a0bfd56923787a3f34c647b594d 218 Pfam PF01266 FAD dependent oxidoreductase 37 218 7.9E-32 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CJD35_RS17230 4e7c7a0bfd56923787a3f34c647b594d 218 Gene3D G3DSA:3.50.50.60 15 218 7.4E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS06790 38e1afa05df6f00770ee210a626a3d5e 141 Gene3D G3DSA:3.90.1030.10 1 117 8.2E-47 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS06790 38e1afa05df6f00770ee210a626a3d5e 141 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS06790 38e1afa05df6f00770ee210a626a3d5e 141 SUPERFAMILY SSF64263 1 119 3.27E-48 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS06790 38e1afa05df6f00770ee210a626a3d5e 141 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS06790 38e1afa05df6f00770ee210a626a3d5e 141 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.726 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS06790 38e1afa05df6f00770ee210a626a3d5e 141 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.7E-41 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS21210 e7b1dbff3a90e90359eba169faaa7476 119 SUPERFAMILY SSF52172 6 109 6.64E-7 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS21210 e7b1dbff3a90e90359eba169faaa7476 119 Gene3D G3DSA:3.40.50.2300 4 119 1.5E-4 T 28-03-2018 CJD35_RS18090 e7b1dbff3a90e90359eba169faaa7476 119 SUPERFAMILY SSF52172 6 109 6.64E-7 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS18090 e7b1dbff3a90e90359eba169faaa7476 119 Gene3D G3DSA:3.40.50.2300 4 119 1.5E-4 T 28-03-2018 CJD35_RS19895 49e61dc592eadc8629883b0430440a49 360 Gene3D G3DSA:3.40.50.970 2 359 1.3E-90 T 28-03-2018 CJD35_RS19895 49e61dc592eadc8629883b0430440a49 360 SUPERFAMILY SSF52518 37 358 2.72E-103 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS19895 49e61dc592eadc8629883b0430440a49 360 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 43 356 8.9E-149 T 28-03-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 CJD35_RS19895 49e61dc592eadc8629883b0430440a49 360 Pfam PF00676 Dehydrogenase E1 component 51 347 2.1E-104 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CJD35_RS18930 7fc211e16939f4f5a70e8423b29a9ab3 763 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 226 610 3.8E-151 T 28-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain CJD35_RS18930 7fc211e16939f4f5a70e8423b29a9ab3 763 Gene3D G3DSA:3.40.50.300 367 624 4.3E-22 T 28-03-2018 CJD35_RS18930 7fc211e16939f4f5a70e8423b29a9ab3 763 Gene3D G3DSA:3.40.50.300 155 366 7.2E-16 T 28-03-2018 CJD35_RS18930 7fc211e16939f4f5a70e8423b29a9ab3 763 SUPERFAMILY SSF52540 213 622 1.31E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS16800 01b60619a12ab402ccae75a39151fcd8 351 Gene3D G3DSA:3.10.310.10 3 180 8.0E-76 T 28-03-2018 CJD35_RS16800 01b60619a12ab402ccae75a39151fcd8 351 Pfam PF04303 PrpF protein 6 350 1.6E-111 T 28-03-2018 IPR007400 PrpF protein CJD35_RS16800 01b60619a12ab402ccae75a39151fcd8 351 SUPERFAMILY SSF54506 6 168 5.34E-62 T 28-03-2018 CJD35_RS16800 01b60619a12ab402ccae75a39151fcd8 351 SUPERFAMILY SSF54506 172 350 7.53E-55 T 28-03-2018 CJD35_RS16800 01b60619a12ab402ccae75a39151fcd8 351 Gene3D G3DSA:3.10.310.10 181 336 1.1E-51 T 28-03-2018 CJD35_RS09135 496efc54f4657f6c5ef4d0a05c6b3776 145 Pfam PF01584 CheW-like domain 5 136 1.2E-18 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJD35_RS09135 496efc54f4657f6c5ef4d0a05c6b3776 145 Gene3D G3DSA:2.40.50.180 21 86 4.1E-13 T 28-03-2018 CJD35_RS09135 496efc54f4657f6c5ef4d0a05c6b3776 145 Gene3D G3DSA:2.30.30.40 87 130 8.2E-5 T 28-03-2018 CJD35_RS09135 496efc54f4657f6c5ef4d0a05c6b3776 145 SMART SM00260 2 136 5.3E-10 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJD35_RS09135 496efc54f4657f6c5ef4d0a05c6b3776 145 SUPERFAMILY SSF50341 5 136 1.44E-21 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJD35_RS14915 b5d44b42b622b82a8fa337c9100571a3 306 SUPERFAMILY SSF51197 6 287 9.16E-68 T 28-03-2018 CJD35_RS14915 b5d44b42b622b82a8fa337c9100571a3 306 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 281 3.8E-57 T 28-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 CJD35_RS14915 b5d44b42b622b82a8fa337c9100571a3 306 Gene3D G3DSA:3.60.130.10 2 296 1.6E-62 T 28-03-2018 CJD35_RS10970 25e26a62c3929bdc05cd09e4b4d87981 109 SMART SM00418 13 95 5.9E-18 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS10970 25e26a62c3929bdc05cd09e4b4d87981 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 2.2E-10 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS10970 25e26a62c3929bdc05cd09e4b4d87981 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 2.2E-10 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS10970 25e26a62c3929bdc05cd09e4b4d87981 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 2.2E-10 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS10970 25e26a62c3929bdc05cd09e4b4d87981 109 Gene3D G3DSA:1.10.10.10 1 108 5.4E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10970 25e26a62c3929bdc05cd09e4b4d87981 109 Pfam PF12840 Helix-turn-helix domain 13 72 3.3E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10970 25e26a62c3929bdc05cd09e4b4d87981 109 SUPERFAMILY SSF46785 9 104 7.28E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19090 03afa58d997a84007faa488b6cde713e 513 Gene3D G3DSA:1.10.443.10 108 355 3.0E-12 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19090 03afa58d997a84007faa488b6cde713e 513 Gene3D G3DSA:1.10.150.130 1 60 0.0085 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS19090 03afa58d997a84007faa488b6cde713e 513 SUPERFAMILY SSF56349 110 350 1.5E-8 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS20270 03afa58d997a84007faa488b6cde713e 513 Gene3D G3DSA:1.10.443.10 108 355 3.0E-12 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20270 03afa58d997a84007faa488b6cde713e 513 Gene3D G3DSA:1.10.150.130 1 60 0.0085 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20270 03afa58d997a84007faa488b6cde713e 513 SUPERFAMILY SSF56349 110 350 1.5E-8 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS01225 d16f7e50d8be93a6915f557e8a2c8ada 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01225 d16f7e50d8be93a6915f557e8a2c8ada 89 Pfam PF00312 Ribosomal protein S15 8 88 1.0E-37 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01225 d16f7e50d8be93a6915f557e8a2c8ada 89 SUPERFAMILY SSF47060 3 89 7.06E-36 T 28-03-2018 IPR009068 S15/NS1, RNA-binding CJD35_RS01225 d16f7e50d8be93a6915f557e8a2c8ada 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.15 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS01225 d16f7e50d8be93a6915f557e8a2c8ada 89 SMART SM01387 8 88 3.4E-52 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS01225 d16f7e50d8be93a6915f557e8a2c8ada 89 Gene3D G3DSA:1.10.287.10 2 89 2.1E-35 T 28-03-2018 CJD35_RS01225 d16f7e50d8be93a6915f557e8a2c8ada 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 6.0E-31 T 28-03-2018 CJD35_RS01225 d16f7e50d8be93a6915f557e8a2c8ada 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 7.0E-39 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS06585 a030a39eb21330de20841cb826a04e21 436 Pfam PF04932 O-Antigen ligase 205 362 1.7E-12 T 28-03-2018 IPR007016 O-antigen ligase-related CJD35_RS06585 a030a39eb21330de20841cb826a04e21 436 Pfam PF17591 Herpesvirus UL41A 337 372 4.9E-7 T 28-03-2018 IPR020141 Herpesvirus UL41A CJD35_RS06120 988c10d75b5b9e2149f6b59d171f3a20 140 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 138 24.423 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS06120 988c10d75b5b9e2149f6b59d171f3a20 140 SUPERFAMILY SSF75217 1 136 6.15E-40 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CJD35_RS06120 988c10d75b5b9e2149f6b59d171f3a20 140 Pfam PF02590 Predicted SPOUT methyltransferase 1 137 4.7E-35 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS06120 988c10d75b5b9e2149f6b59d171f3a20 140 Gene3D G3DSA:3.40.1280.10 1 138 3.2E-39 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJD35_RS06120 988c10d75b5b9e2149f6b59d171f3a20 140 PIRSF PIRSF004505 1 138 2.6E-32 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS01370 2e53ef8a4d181893177f8df987f0c5f4 307 SUPERFAMILY SSF48576 22 301 7.4E-77 T 28-03-2018 IPR008949 Isoprenoid synthase domain CJD35_RS01370 2e53ef8a4d181893177f8df987f0c5f4 307 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 226 238 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site CJD35_RS01370 2e53ef8a4d181893177f8df987f0c5f4 307 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 94 110 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site CJD35_RS01370 2e53ef8a4d181893177f8df987f0c5f4 307 Gene3D G3DSA:1.10.600.10 4 307 1.0E-74 T 28-03-2018 IPR008949 Isoprenoid synthase domain CJD35_RS01370 2e53ef8a4d181893177f8df987f0c5f4 307 Pfam PF00348 Polyprenyl synthetase 44 275 1.5E-50 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CJD35_RS07980 8b88147978b21ec1a5dd5a1df585cb24 949 Pfam PF00593 TonB dependent receptor 404 947 9.2E-48 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07980 8b88147978b21ec1a5dd5a1df585cb24 949 Gene3D G3DSA:2.170.130.10 5 137 9.4E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS07980 8b88147978b21ec1a5dd5a1df585cb24 949 Gene3D G3DSA:2.40.170.20 138 948 2.3E-68 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07980 8b88147978b21ec1a5dd5a1df585cb24 949 Pfam PF07715 TonB-dependent Receptor Plug Domain 29 143 1.1E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS07980 8b88147978b21ec1a5dd5a1df585cb24 949 SUPERFAMILY SSF56935 504 948 5.19E-89 T 28-03-2018 CJD35_RS07980 8b88147978b21ec1a5dd5a1df585cb24 949 SUPERFAMILY SSF56935 398 458 5.19E-89 T 28-03-2018 CJD35_RS07980 8b88147978b21ec1a5dd5a1df585cb24 949 SUPERFAMILY SSF56935 304 352 5.19E-89 T 28-03-2018 CJD35_RS07980 8b88147978b21ec1a5dd5a1df585cb24 949 SUPERFAMILY SSF56935 14 226 5.19E-89 T 28-03-2018 CJD35_RS15655 c5966c2ab788318dee9acdba823385e7 137 Gene3D G3DSA:3.10.450.50 2 137 1.3E-32 T 28-03-2018 CJD35_RS15655 c5966c2ab788318dee9acdba823385e7 137 SUPERFAMILY SSF54427 6 131 1.35E-34 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS15655 c5966c2ab788318dee9acdba823385e7 137 Pfam PF13577 SnoaL-like domain 6 127 2.5E-28 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS19990 41fd6ff3071820427117c8969228e4af 606 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 269 277 - T 28-03-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CJD35_RS19990 41fd6ff3071820427117c8969228e4af 606 PIRSF PIRSF001348 4 606 1.1E-279 T 28-03-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CJD35_RS19990 41fd6ff3071820427117c8969228e4af 606 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 245 605 2.3E-167 T 28-03-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CJD35_RS19990 41fd6ff3071820427117c8969228e4af 606 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 10 606 50.664 T 28-03-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CJD35_RS19990 41fd6ff3071820427117c8969228e4af 606 SUPERFAMILY SSF53795 245 605 4.35E-154 T 28-03-2018 CJD35_RS19990 41fd6ff3071820427117c8969228e4af 606 SUPERFAMILY SSF68923 12 244 1.31E-100 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CJD35_RS19990 41fd6ff3071820427117c8969228e4af 606 Gene3D G3DSA:3.40.449.10 6 244 1.4E-117 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CJD35_RS19990 41fd6ff3071820427117c8969228e4af 606 Gene3D G3DSA:3.90.228.20 325 606 2.4E-119 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CJD35_RS19990 41fd6ff3071820427117c8969228e4af 606 Gene3D G3DSA:3.90.228.20 245 316 2.1E-22 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CJD35_RS19990 41fd6ff3071820427117c8969228e4af 606 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 22 241 9.5E-105 T 28-03-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CJD35_RS12305 82594ea134bc700a8f47894a2a6c5907 152 SMART SM00448 20 126 5.6E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS12305 82594ea134bc700a8f47894a2a6c5907 152 SUPERFAMILY SSF52172 21 130 1.57E-18 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS12305 82594ea134bc700a8f47894a2a6c5907 152 Gene3D G3DSA:3.40.50.2300 12 142 1.2E-15 T 28-03-2018 CJD35_RS12305 82594ea134bc700a8f47894a2a6c5907 152 Pfam PF00072 Response regulator receiver domain 22 126 4.3E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS19890 d6f3dae346f87243b8489d2f478aa0c7 456 SUPERFAMILY SSF51230 1 94 6.54E-29 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS19890 d6f3dae346f87243b8489d2f478aa0c7 456 SMART SM00861 134 309 1.7E-59 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS19890 d6f3dae346f87243b8489d2f478aa0c7 456 Gene3D G3DSA:3.40.50.970 131 324 8.7E-75 T 28-03-2018 CJD35_RS19890 d6f3dae346f87243b8489d2f478aa0c7 456 Pfam PF02780 Transketolase, C-terminal domain 324 446 2.7E-40 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CJD35_RS19890 d6f3dae346f87243b8489d2f478aa0c7 456 Gene3D G3DSA:2.40.50.100 2 81 5.8E-18 T 28-03-2018 CJD35_RS19890 d6f3dae346f87243b8489d2f478aa0c7 456 SUPERFAMILY SSF52518 134 322 1.08E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS19890 d6f3dae346f87243b8489d2f478aa0c7 456 SUPERFAMILY SSF52922 318 453 3.93E-42 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS19890 d6f3dae346f87243b8489d2f478aa0c7 456 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CJD35_RS19890 d6f3dae346f87243b8489d2f478aa0c7 456 Gene3D G3DSA:3.40.50.920 325 454 2.2E-40 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CJD35_RS19890 d6f3dae346f87243b8489d2f478aa0c7 456 Pfam PF02779 Transketolase, pyrimidine binding domain 134 308 5.2E-49 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CJD35_RS19890 d6f3dae346f87243b8489d2f478aa0c7 456 Pfam PF00364 Biotin-requiring enzyme 4 77 2.8E-21 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS09280 7442e595c1c1b2e3ec821b332ee1756d 265 SUPERFAMILY SSF55315 4 101 1.25E-19 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CJD35_RS09280 7442e595c1c1b2e3ec821b332ee1756d 265 Gene3D G3DSA:3.40.1280.10 101 265 7.4E-40 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJD35_RS09280 7442e595c1c1b2e3ec821b332ee1756d 265 Gene3D G3DSA:3.30.1330.30 1 100 1.4E-17 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CJD35_RS09280 7442e595c1c1b2e3ec821b332ee1756d 265 Pfam PF00588 SpoU rRNA Methylase family 118 256 5.3E-31 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CJD35_RS09280 7442e595c1c1b2e3ec821b332ee1756d 265 SUPERFAMILY SSF75217 101 262 3.14E-39 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CJD35_RS21125 391fba36bf5dcba52bb74fc39ee484cb 347 Pfam PF03432 Relaxase/Mobilisation nuclease domain 116 203 1.8E-6 T 28-03-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 CJD35_RS15045 b7c162d8c1438d6803441032ff50fe7f 780 Pfam PF07715 TonB-dependent Receptor Plug Domain 36 142 2.1E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15045 b7c162d8c1438d6803441032ff50fe7f 780 Pfam PF00593 TonB dependent receptor 300 775 6.0E-35 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15045 b7c162d8c1438d6803441032ff50fe7f 780 Gene3D G3DSA:2.40.170.20 154 777 2.7E-64 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15045 b7c162d8c1438d6803441032ff50fe7f 780 SUPERFAMILY SSF56935 20 625 1.1E-105 T 28-03-2018 CJD35_RS15045 b7c162d8c1438d6803441032ff50fe7f 780 SUPERFAMILY SSF56935 660 777 1.1E-105 T 28-03-2018 CJD35_RS15045 b7c162d8c1438d6803441032ff50fe7f 780 Gene3D G3DSA:2.170.130.10 16 153 2.5E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15165 797706f310632cd1af3a173ab6b67eb1 223 Gene3D G3DSA:3.40.50.300 4 223 7.0E-52 T 28-03-2018 CJD35_RS15165 797706f310632cd1af3a173ab6b67eb1 223 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS15165 797706f310632cd1af3a173ab6b67eb1 223 Pfam PF00005 ABC transporter 24 171 2.3E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS15165 797706f310632cd1af3a173ab6b67eb1 223 SUPERFAMILY SSF52540 14 216 1.36E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15165 797706f310632cd1af3a173ab6b67eb1 223 SMART SM00382 33 220 5.2E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS07295 7eddb4beb091b6696866ead2a0c3c857 318 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 138 153 - T 28-03-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 CJD35_RS07295 7eddb4beb091b6696866ead2a0c3c857 318 SUPERFAMILY SSF48576 15 296 2.5E-73 T 28-03-2018 IPR008949 Isoprenoid synthase domain CJD35_RS07295 7eddb4beb091b6696866ead2a0c3c857 318 Pfam PF00494 Squalene/phytoene synthase 21 279 4.9E-63 T 28-03-2018 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 CJD35_RS07295 7eddb4beb091b6696866ead2a0c3c857 318 Gene3D G3DSA:1.10.600.10 6 299 5.4E-65 T 28-03-2018 IPR008949 Isoprenoid synthase domain CJD35_RS07295 7eddb4beb091b6696866ead2a0c3c857 318 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 170 195 - T 28-03-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 CJD35_RS11050 8314d283cc1fab9807c01372882164a9 497 Pfam PF13629 Pilus formation protein N terminal region 43 111 1.7E-19 T 28-03-2018 IPR032789 Pilus formation protein, N-terminal CJD35_RS11050 8314d283cc1fab9807c01372882164a9 497 Pfam PF00263 Bacterial type II and III secretion system protein 265 420 1.5E-43 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 CJD35_RS11050 8314d283cc1fab9807c01372882164a9 497 PRINTS PR01032 Gene IV protein signature 323 347 2.4E-6 T 28-03-2018 CJD35_RS11050 8314d283cc1fab9807c01372882164a9 497 PRINTS PR01032 Gene IV protein signature 400 422 2.4E-6 T 28-03-2018 CJD35_RS11050 8314d283cc1fab9807c01372882164a9 497 PRINTS PR01032 Gene IV protein signature 347 375 2.4E-6 T 28-03-2018 CJD35_RS11050 8314d283cc1fab9807c01372882164a9 497 Gene3D G3DSA:2.80.10.50 68 278 8.3E-4 T 28-03-2018 CJD35_RS11050 8314d283cc1fab9807c01372882164a9 497 PRINTS PR00811 Bacterial general secretion pathway protein D signature 384 402 1.0E-9 T 28-03-2018 IPR001775 GspD/PilQ family CJD35_RS11050 8314d283cc1fab9807c01372882164a9 497 PRINTS PR00811 Bacterial general secretion pathway protein D signature 180 190 1.0E-9 T 28-03-2018 IPR001775 GspD/PilQ family CJD35_RS11050 8314d283cc1fab9807c01372882164a9 497 PRINTS PR00811 Bacterial general secretion pathway protein D signature 260 284 1.0E-9 T 28-03-2018 IPR001775 GspD/PilQ family CJD35_RS11050 8314d283cc1fab9807c01372882164a9 497 PRINTS PR00811 Bacterial general secretion pathway protein D signature 407 421 1.0E-9 T 28-03-2018 IPR001775 GspD/PilQ family CJD35_RS09315 67d64b7e57a7fb53624ab24c1399b591 124 SUPERFAMILY SSF54736 53 124 4.36E-26 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CJD35_RS09315 67d64b7e57a7fb53624ab24c1399b591 124 SUPERFAMILY SSF48300 3 60 6.8E-16 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09315 67d64b7e57a7fb53624ab24c1399b591 124 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 124 24.785 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09315 67d64b7e57a7fb53624ab24c1399b591 124 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 58 124 4.2E-31 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09315 67d64b7e57a7fb53624ab24c1399b591 124 Gene3D G3DSA:3.30.1390.10 54 124 1.8E-32 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CJD35_RS09315 67d64b7e57a7fb53624ab24c1399b591 124 Gene3D G3DSA:1.20.5.710 2 53 6.8E-17 T 28-03-2018 CJD35_RS09315 67d64b7e57a7fb53624ab24c1399b591 124 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 52 1.3E-18 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09315 67d64b7e57a7fb53624ab24c1399b591 124 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 59 124 5.0E-24 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS09315 67d64b7e57a7fb53624ab24c1399b591 124 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 124 1.2E-48 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS15180 f4d768555dc550b881bc4805ea8d0799 134 Pfam PF03203 MerC mercury resistance protein 12 120 7.3E-27 T 28-03-2018 IPR004891 MerC mercury resistance protein CJD35_RS06995 593d8045c68c4b59f5fdb32c33d65dd1 281 Pfam PF00581 Rhodanese-like domain 6 126 1.4E-13 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS06995 593d8045c68c4b59f5fdb32c33d65dd1 281 Pfam PF00581 Rhodanese-like domain 156 268 5.4E-12 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS06995 593d8045c68c4b59f5fdb32c33d65dd1 281 SUPERFAMILY SSF52821 3 149 1.1E-36 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS06995 593d8045c68c4b59f5fdb32c33d65dd1 281 ProSitePatterns PS00683 Rhodanese C-terminal signature. 258 268 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CJD35_RS06995 593d8045c68c4b59f5fdb32c33d65dd1 281 SUPERFAMILY SSF52821 157 280 1.17E-34 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS06995 593d8045c68c4b59f5fdb32c33d65dd1 281 Gene3D G3DSA:3.40.250.10 2 147 1.2E-27 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS06995 593d8045c68c4b59f5fdb32c33d65dd1 281 Gene3D G3DSA:3.40.250.10 148 281 1.6E-24 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS06995 593d8045c68c4b59f5fdb32c33d65dd1 281 SMART SM00450 153 274 6.6E-16 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS06995 593d8045c68c4b59f5fdb32c33d65dd1 281 SMART SM00450 5 130 1.1E-15 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS10140 a3761daed1916a90e27e3c947187997f 674 Gene3D G3DSA:2.60.40.1250 39 164 4.9E-9 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CJD35_RS10140 a3761daed1916a90e27e3c947187997f 674 Pfam PF11412 Disulphide bond corrector protein DsbC 44 155 3.4E-18 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CJD35_RS10140 a3761daed1916a90e27e3c947187997f 674 Gene3D G3DSA:3.40.30.10 571 673 1.5E-7 T 28-03-2018 CJD35_RS10140 a3761daed1916a90e27e3c947187997f 674 Pfam PF13899 Thioredoxin-like 572 653 6.4E-12 T 28-03-2018 CJD35_RS10140 a3761daed1916a90e27e3c947187997f 674 SUPERFAMILY SSF52833 568 672 5.17E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS10140 a3761daed1916a90e27e3c947187997f 674 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 291 463 2.9E-7 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CJD35_RS13125 2d2f911a8ecece70c2ec8fbb90c8ba81 106 SUPERFAMILY SSF52833 4 106 1.22E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS13125 2d2f911a8ecece70c2ec8fbb90c8ba81 106 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 3.3E-39 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CJD35_RS13125 2d2f911a8ecece70c2ec8fbb90c8ba81 106 Pfam PF00085 Thioredoxin 4 103 2.4E-34 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 CJD35_RS13125 2d2f911a8ecece70c2ec8fbb90c8ba81 106 ProSitePatterns PS00194 Thioredoxin family active site. 23 41 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CJD35_RS13125 2d2f911a8ecece70c2ec8fbb90c8ba81 106 PIRSF PIRSF000077 1 106 4.2E-43 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CJD35_RS13125 2d2f911a8ecece70c2ec8fbb90c8ba81 106 PRINTS PR00421 Thioredoxin family signature 22 30 1.3E-9 T 28-03-2018 CJD35_RS13125 2d2f911a8ecece70c2ec8fbb90c8ba81 106 PRINTS PR00421 Thioredoxin family signature 70 81 1.3E-9 T 28-03-2018 CJD35_RS13125 2d2f911a8ecece70c2ec8fbb90c8ba81 106 PRINTS PR00421 Thioredoxin family signature 30 39 1.3E-9 T 28-03-2018 CJD35_RS13125 2d2f911a8ecece70c2ec8fbb90c8ba81 106 Gene3D G3DSA:3.40.30.10 1 106 3.8E-36 T 28-03-2018 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 SUPERFAMILY SSF46609 1 84 4.71E-28 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.4E-16 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 3.4E-16 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.4E-16 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 3.4E-16 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 PRINTS PR01703 Manganese superoxide dismutase signature 66 79 3.4E-16 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 PIRSF PIRSF000349 1 199 4.3E-68 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 Gene3D G3DSA:1.10.287.990 20 83 4.2E-23 T 28-03-2018 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 1.1E-30 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 83 1.5E-23 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS09180 adde945d4e629b8017dbe9569177806a 204 SUPERFAMILY SSF54719 85 192 4.98E-37 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS09085 0586a4ad11fae70b15532341390b47c1 391 Pfam PF13439 Glycosyltransferase Family 4 22 201 3.9E-15 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS09085 0586a4ad11fae70b15532341390b47c1 391 Gene3D G3DSA:3.40.50.2000 209 374 2.9E-42 T 28-03-2018 CJD35_RS09085 0586a4ad11fae70b15532341390b47c1 391 Pfam PF00534 Glycosyl transferases group 1 214 364 4.5E-34 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS09085 0586a4ad11fae70b15532341390b47c1 391 Gene3D G3DSA:3.40.50.2000 24 208 5.9E-11 T 28-03-2018 CJD35_RS09085 0586a4ad11fae70b15532341390b47c1 391 SUPERFAMILY SSF53756 20 386 1.79E-70 T 28-03-2018 CJD35_RS08055 3d7c02a27ed121c39c4a65fd71194308 296 Gene3D G3DSA:2.40.100.10 27 254 1.4E-29 T 28-03-2018 IPR029000 Cyclophilin-like domain CJD35_RS08055 3d7c02a27ed121c39c4a65fd71194308 296 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 49 237 6.2E-20 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS08055 3d7c02a27ed121c39c4a65fd71194308 296 SUPERFAMILY SSF50891 158 255 4.09E-22 T 28-03-2018 IPR029000 Cyclophilin-like domain CJD35_RS08055 3d7c02a27ed121c39c4a65fd71194308 296 SUPERFAMILY SSF50891 52 121 4.09E-22 T 28-03-2018 IPR029000 Cyclophilin-like domain CJD35_RS05525 3b11462422e78f1669c99121977540bf 921 Pfam PF00176 SNF2 family N-terminal domain 120 300 4.8E-10 T 28-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CJD35_RS05525 3b11462422e78f1669c99121977540bf 921 Gene3D G3DSA:3.40.50.300 93 343 1.6E-22 T 28-03-2018 CJD35_RS05525 3b11462422e78f1669c99121977540bf 921 Pfam PF00271 Helicase conserved C-terminal domain 446 562 8.4E-13 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS05525 3b11462422e78f1669c99121977540bf 921 SUPERFAMILY SSF52540 151 309 6.38E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05525 3b11462422e78f1669c99121977540bf 921 SUPERFAMILY SSF52540 444 578 6.38E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05525 3b11462422e78f1669c99121977540bf 921 Gene3D G3DSA:3.40.50.300 430 601 3.7E-22 T 28-03-2018 CJD35_RS05525 3b11462422e78f1669c99121977540bf 921 SMART SM00487 96 306 4.5E-14 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS05525 3b11462422e78f1669c99121977540bf 921 SMART SM00490 473 562 9.2E-14 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS01975 0d3e0882d7531f4dd850de4b69e5c1bb 129 Gene3D G3DSA:1.20.1300.10 14 129 1.6E-17 T 28-03-2018 CJD35_RS01975 0d3e0882d7531f4dd850de4b69e5c1bb 129 SUPERFAMILY SSF81343 11 122 8.07E-28 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01975 0d3e0882d7531f4dd850de4b69e5c1bb 129 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 16 119 2.1E-27 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CJD35_RS01975 0d3e0882d7531f4dd850de4b69e5c1bb 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 7 105 6.5E-14 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS02980 54d200cac0d220bf9cc46b7f8c5382db 430 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 278 386 9.5E-40 T 28-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CJD35_RS02980 54d200cac0d220bf9cc46b7f8c5382db 430 PIRSF PIRSF038885 7 417 1.5E-193 T 28-03-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 CJD35_RS02980 54d200cac0d220bf9cc46b7f8c5382db 430 Pfam PF00033 Cytochrome b/b6/petB 36 219 4.1E-71 T 28-03-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CJD35_RS02980 54d200cac0d220bf9cc46b7f8c5382db 430 Gene3D G3DSA:1.20.810.10 17 406 7.2E-155 T 28-03-2018 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 CJD35_RS02980 54d200cac0d220bf9cc46b7f8c5382db 430 SUPERFAMILY SSF81342 30 280 2.35E-101 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CJD35_RS02980 54d200cac0d220bf9cc46b7f8c5382db 430 SUPERFAMILY SSF81648 281 407 1.77E-38 T 28-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CJD35_RS02750 390aa382ca372a61378353f86c13404d 570 Gene3D G3DSA:3.40.50.1220 203 341 2.4E-33 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS02750 390aa382ca372a61378353f86c13404d 570 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 527 1.3E-30 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CJD35_RS02750 390aa382ca372a61378353f86c13404d 570 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 170 3.5E-46 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CJD35_RS02750 390aa382ca372a61378353f86c13404d 570 Gene3D G3DSA:3.40.50.970 342 538 2.2E-36 T 28-03-2018 CJD35_RS02750 390aa382ca372a61378353f86c13404d 570 SUPERFAMILY SSF52518 2 177 2.55E-44 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS02750 390aa382ca372a61378353f86c13404d 570 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 319 1.7E-26 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CJD35_RS02750 390aa382ca372a61378353f86c13404d 570 Gene3D G3DSA:3.40.50.970 1 202 1.8E-43 T 28-03-2018 CJD35_RS02750 390aa382ca372a61378353f86c13404d 570 SUPERFAMILY SSF52467 156 348 1.57E-37 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS02750 390aa382ca372a61378353f86c13404d 570 SUPERFAMILY SSF52518 357 555 3.79E-49 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS03880 dda9a4ddd07e10b65a31efa283a7089f 619 Pfam PF07664 Ferrous iron transport protein B C terminus 398 450 2.1E-15 T 28-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CJD35_RS03880 dda9a4ddd07e10b65a31efa283a7089f 619 SUPERFAMILY SSF52540 7 184 5.6E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03880 dda9a4ddd07e10b65a31efa283a7089f 619 Gene3D G3DSA:3.40.50.300 2 218 1.3E-30 T 28-03-2018 CJD35_RS03880 dda9a4ddd07e10b65a31efa283a7089f 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 28 46 3.7E-8 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS03880 dda9a4ddd07e10b65a31efa283a7089f 619 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 7 27 3.7E-8 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS03880 dda9a4ddd07e10b65a31efa283a7089f 619 Pfam PF02421 Ferrous iron transport protein B 7 165 8.4E-54 T 28-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CJD35_RS03880 dda9a4ddd07e10b65a31efa283a7089f 619 Pfam PF07670 Nucleoside recognition 287 380 6.0E-12 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CJD35_RS03880 dda9a4ddd07e10b65a31efa283a7089f 619 Pfam PF07670 Nucleoside recognition 455 589 4.8E-21 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CJD35_RS02495 88b70706a28364ef386ba7700bb8d42f 219 Gene3D G3DSA:3.30.2420.10 142 219 1.0E-13 T 28-03-2018 CJD35_RS02495 88b70706a28364ef386ba7700bb8d42f 219 PRINTS PR01217 Proline rich extensin signature 55 67 1.9E-9 T 28-03-2018 CJD35_RS02495 88b70706a28364ef386ba7700bb8d42f 219 PRINTS PR01217 Proline rich extensin signature 70 91 1.9E-9 T 28-03-2018 CJD35_RS02495 88b70706a28364ef386ba7700bb8d42f 219 PRINTS PR01217 Proline rich extensin signature 100 116 1.9E-9 T 28-03-2018 CJD35_RS02495 88b70706a28364ef386ba7700bb8d42f 219 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 140 216 1.0E-15 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CJD35_RS02495 88b70706a28364ef386ba7700bb8d42f 219 SUPERFAMILY SSF74653 139 198 5.1E-13 T 28-03-2018 CJD35_RS02495 88b70706a28364ef386ba7700bb8d42f 219 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 140 208 1.1E-12 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CJD35_RS17910 b3efb110d2d8f2c6ad4a0a866e63d456 382 TIGRFAM TIGR01840 esterase_phb: esterase, PHB depolymerase family 46 253 1.9E-67 T 28-03-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 CJD35_RS17910 b3efb110d2d8f2c6ad4a0a866e63d456 382 SUPERFAMILY SSF53474 130 322 1.48E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS17910 b3efb110d2d8f2c6ad4a0a866e63d456 382 SUPERFAMILY SSF53474 19 130 3.53E-21 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS17910 b3efb110d2d8f2c6ad4a0a866e63d456 382 Gene3D G3DSA:3.40.50.1820 9 296 1.7E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS17910 b3efb110d2d8f2c6ad4a0a866e63d456 382 Pfam PF10503 Esterase PHB depolymerase 46 247 4.8E-44 T 28-03-2018 IPR010126 Esterase, PHB depolymerase GO:0005576|GO:0016787 CJD35_RS14990 f4e9980e021e3789b9be886a51235cbf 307 Gene3D G3DSA:3.40.50.1820 4 298 4.2E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS14990 f4e9980e021e3789b9be886a51235cbf 307 SUPERFAMILY SSF53474 22 297 5.09E-54 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS14990 f4e9980e021e3789b9be886a51235cbf 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 115 128 2.4E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS14990 f4e9980e021e3789b9be886a51235cbf 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 129 142 2.4E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS14990 f4e9980e021e3789b9be886a51235cbf 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 70 85 2.4E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS14990 f4e9980e021e3789b9be886a51235cbf 307 PRINTS PR00111 Alpha/beta hydrolase fold signature 242 256 2.4E-9 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS14990 f4e9980e021e3789b9be886a51235cbf 307 Pfam PF00561 alpha/beta hydrolase fold 45 185 3.5E-23 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS02965 e9655a4cb1396b571b7248d7ae9363ce 206 Pfam PF01048 Phosphorylase superfamily 123 175 3.6E-7 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJD35_RS02965 e9655a4cb1396b571b7248d7ae9363ce 206 SUPERFAMILY SSF53167 30 197 5.01E-24 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CJD35_RS02965 e9655a4cb1396b571b7248d7ae9363ce 206 TIGRFAM TIGR01705 MTA/SAH-nuc-hyp: putative 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 7 204 1.8E-76 T 28-03-2018 IPR010050 5-methylthioadenosine/S-adenosylhomocysteine nucleosidase, putative CJD35_RS02965 e9655a4cb1396b571b7248d7ae9363ce 206 Gene3D G3DSA:3.40.50.1580 28 206 1.3E-13 T 28-03-2018 CJD35_RS02790 b552d2329883a509a99a6f33b7fb64a2 191 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 41 159 1.9E-14 T 28-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CJD35_RS02790 b552d2329883a509a99a6f33b7fb64a2 191 SUPERFAMILY SSF55961 36 173 8.54E-26 T 28-03-2018 CJD35_RS02790 b552d2329883a509a99a6f33b7fb64a2 191 Gene3D G3DSA:3.30.530.20 1 191 3.0E-25 T 28-03-2018 IPR023393 START-like domain CJD35_RS05310 ff1bea200d5fa40573aad8a874a27d89 285 Pfam PF03524 Conjugal transfer protein 55 274 3.0E-66 T 28-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CJD35_RS05310 ff1bea200d5fa40573aad8a874a27d89 285 TIGRFAM TIGR02775 TrbG_Ti: P-type conjugative transfer protein TrbG 56 263 3.0E-80 T 28-03-2018 IPR014142 P-type conjugative transfer protein TrbG CJD35_RS07925 2e1d39febb5493e45eacac6b6a59b5bf 576 SUPERFAMILY SSF53649 51 492 9.74E-115 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJD35_RS07925 2e1d39febb5493e45eacac6b6a59b5bf 576 Gene3D G3DSA:3.40.720.10 47 414 1.1E-94 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJD35_RS07925 2e1d39febb5493e45eacac6b6a59b5bf 576 Pfam PF16347 Domain of unknown function (DUF4976) 392 489 3.1E-14 T 28-03-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096 CJD35_RS07925 2e1d39febb5493e45eacac6b6a59b5bf 576 ProSitePatterns PS00523 Sulfatases signature 1. 97 109 - T 28-03-2018 IPR024607 Sulfatase, conserved site CJD35_RS07925 2e1d39febb5493e45eacac6b6a59b5bf 576 Gene3D G3DSA:3.30.1120.10 420 505 1.8E-13 T 28-03-2018 CJD35_RS07925 2e1d39febb5493e45eacac6b6a59b5bf 576 Pfam PF00884 Sulfatase 51 389 2.2E-76 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CJD35_RS03420 75c925701960e66c99395ba1862f10ce 483 SMART SM00382 24 214 0.0054 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS03420 75c925701960e66c99395ba1862f10ce 483 Pfam PF01935 Domain of unknown function DUF87 10 75 2.4E-9 T 28-03-2018 IPR002789 Helicase HerA, central domain CJD35_RS03420 75c925701960e66c99395ba1862f10ce 483 SUPERFAMILY SSF52540 5 252 4.18E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03420 75c925701960e66c99395ba1862f10ce 483 PIRSF PIRSF034081 1 483 1.5E-204 T 28-03-2018 IPR014588 ATPase, Atu1862 type, predicted CJD35_RS03420 75c925701960e66c99395ba1862f10ce 483 Gene3D G3DSA:3.40.50.300 2 286 5.8E-22 T 28-03-2018 CJD35_RS03420 75c925701960e66c99395ba1862f10ce 483 Gene3D G3DSA:1.10.10.10 401 471 0.015 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21095 e0fd207e0f74657eb78fece1380e6981 104 SUPERFAMILY SSF50249 9 98 3.43E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS21095 e0fd207e0f74657eb78fece1380e6981 104 Pfam PF00436 Single-strand binding protein family 19 95 1.3E-13 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CJD35_RS21095 e0fd207e0f74657eb78fece1380e6981 104 Gene3D G3DSA:2.40.50.140 1 104 1.9E-20 T 28-03-2018 CJD35_RS21095 e0fd207e0f74657eb78fece1380e6981 104 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 16 97 4.1E-15 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CJD35_RS21095 e0fd207e0f74657eb78fece1380e6981 104 PIRSF PIRSF002070 1 103 2.1E-15 T 28-03-2018 CJD35_RS12780 7168420c15d2bbca499acf2a24b6ba40 223 SUPERFAMILY SSF52540 4 222 7.64E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12780 7168420c15d2bbca499acf2a24b6ba40 223 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS12780 7168420c15d2bbca499acf2a24b6ba40 223 Gene3D G3DSA:3.40.50.300 1 223 3.2E-57 T 28-03-2018 CJD35_RS12780 7168420c15d2bbca499acf2a24b6ba40 223 SMART SM00382 33 222 1.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS12780 7168420c15d2bbca499acf2a24b6ba40 223 Pfam PF00005 ABC transporter 24 172 1.9E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 Pfam PF00355 Rieske [2Fe-2S] domain 48 132 1.6E-17 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 168 410 1.0E-13 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 SUPERFAMILY SSF50022 19 164 2.23E-44 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 Gene3D G3DSA:3.90.380.10 152 461 1.7E-50 T 28-03-2018 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 Gene3D G3DSA:2.102.10.10 40 151 9.5E-21 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 91 114 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 33 58 1.1E-40 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 63 78 1.1E-40 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 84 104 1.1E-40 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 105 125 1.1E-40 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 149 175 1.1E-40 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 1.1E-40 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS15680 670d02e6686cf9bcab7e1b6a1a1d9af5 461 SUPERFAMILY SSF55961 167 460 6.75E-51 T 28-03-2018 CJD35_RS12470 e721af00a6bd992d84c744a68ced83a3 489 Pfam PF02321 Outer membrane efflux protein 44 268 2.6E-11 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS12470 e721af00a6bd992d84c744a68ced83a3 489 Pfam PF02321 Outer membrane efflux protein 300 469 2.9E-19 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS12470 e721af00a6bd992d84c744a68ced83a3 489 Gene3D G3DSA:1.20.1600.10 2 472 1.6E-47 T 28-03-2018 CJD35_RS12470 e721af00a6bd992d84c744a68ced83a3 489 SUPERFAMILY SSF56954 137 470 1.74E-52 T 28-03-2018 CJD35_RS12470 e721af00a6bd992d84c744a68ced83a3 489 SUPERFAMILY SSF56954 1 79 1.74E-52 T 28-03-2018 CJD35_RS16750 2817368f0ad58684e30ef88c9447bb69 426 Pfam PF10134 Replication initiator protein A 40 273 4.4E-70 T 28-03-2018 IPR018777 Replication initiator protein A CJD35_RS16750 2817368f0ad58684e30ef88c9447bb69 426 Gene3D G3DSA:1.10.10.10 57 193 3.2E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03155 14492d41a47fdf816f399ee9252c0b75 272 PRINTS PR00207 Flagellin signature 110 133 4.4E-21 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJD35_RS03155 14492d41a47fdf816f399ee9252c0b75 272 PRINTS PR00207 Flagellin signature 36 53 4.4E-21 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJD35_RS03155 14492d41a47fdf816f399ee9252c0b75 272 PRINTS PR00207 Flagellin signature 75 94 4.4E-21 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CJD35_RS03155 14492d41a47fdf816f399ee9252c0b75 272 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 138 1.3E-33 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJD35_RS03155 14492d41a47fdf816f399ee9252c0b75 272 SUPERFAMILY SSF64518 1 271 4.71E-77 T 28-03-2018 CJD35_RS03155 14492d41a47fdf816f399ee9252c0b75 272 Pfam PF00700 Bacterial flagellin C-terminal helical region 188 271 3.4E-24 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CJD35_RS03155 14492d41a47fdf816f399ee9252c0b75 272 Gene3D G3DSA:1.20.1330.10 39 244 5.5E-62 T 28-03-2018 CJD35_RS08850 7ac069baf66b77679abd22477ea5cc2a 98 SUPERFAMILY SSF81301 1 97 7.63E-19 T 28-03-2018 CJD35_RS08850 7ac069baf66b77679abd22477ea5cc2a 98 Gene3D G3DSA:3.30.460.10 1 97 1.4E-17 T 28-03-2018 CJD35_RS08850 7ac069baf66b77679abd22477ea5cc2a 98 Pfam PF01909 Nucleotidyltransferase domain 19 91 4.4E-10 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CJD35_RS16600 f039e488a036c5b693ee70fbfe7b9026 164 Gene3D G3DSA:1.10.10.10 8 59 4.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16600 f039e488a036c5b693ee70fbfe7b9026 164 SUPERFAMILY SSF46785 6 66 7.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16600 f039e488a036c5b693ee70fbfe7b9026 164 Pfam PF01037 Lrp/AsnC ligand binding domain 74 146 6.3E-17 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CJD35_RS16600 f039e488a036c5b693ee70fbfe7b9026 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 54 1.8E-20 T 28-03-2018 CJD35_RS16600 f039e488a036c5b693ee70fbfe7b9026 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CJD35_RS16600 f039e488a036c5b693ee70fbfe7b9026 164 SUPERFAMILY SSF54909 69 155 1.47E-17 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS16600 f039e488a036c5b693ee70fbfe7b9026 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 3.0E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS16600 f039e488a036c5b693ee70fbfe7b9026 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 3.0E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS16600 f039e488a036c5b693ee70fbfe7b9026 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 3.0E-18 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS16600 f039e488a036c5b693ee70fbfe7b9026 164 SMART SM00344 7 116 1.1E-46 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CJD35_RS16600 f039e488a036c5b693ee70fbfe7b9026 164 Gene3D G3DSA:3.30.70.920 60 153 6.6E-19 T 28-03-2018 CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Gene3D G3DSA:2.60.120.20 250 283 7.5E-5 T 28-03-2018 CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Gene3D G3DSA:2.60.120.20 194 249 5.1E-6 T 28-03-2018 CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Gene3D G3DSA:2.60.120.20 284 334 2.0E-17 T 28-03-2018 CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Pfam PF04052 TolB amino-terminal domain 28 140 2.8E-18 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 SUPERFAMILY SSF69304 173 441 2.35E-55 T 28-03-2018 CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Pfam PF07676 WD40-like Beta Propeller Repeat 293 328 1.9E-9 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Pfam PF07676 WD40-like Beta Propeller Repeat 337 362 0.17 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Pfam PF07676 WD40-like Beta Propeller Repeat 250 284 7.9E-6 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Pfam PF07676 WD40-like Beta Propeller Repeat 382 416 0.0041 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Pfam PF07676 WD40-like Beta Propeller Repeat 207 239 0.025 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Hamap MF_00671 Protein TolB [tolB]. 9 439 28.381 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Gene3D G3DSA:3.40.50.10070 27 175 6.3E-21 T 28-03-2018 CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Gene3D G3DSA:2.130.10.10 335 359 5.8E-4 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 Gene3D G3DSA:2.130.10.150 360 442 4.5E-15 T 28-03-2018 CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 20 440 5.3E-126 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CJD35_RS04730 c61f481968b1acc7c42653459da30a59 444 SUPERFAMILY SSF52964 33 170 1.44E-25 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CJD35_RS00580 5b3b7c4b523c03cd71680e63cfd1c662 466 Gene3D G3DSA:1.20.1600.10 19 466 1.9E-106 T 28-03-2018 CJD35_RS00580 5b3b7c4b523c03cd71680e63cfd1c662 466 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 464 1.9E-113 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CJD35_RS00580 5b3b7c4b523c03cd71680e63cfd1c662 466 Pfam PF02321 Outer membrane efflux protein 66 253 1.8E-27 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS00580 5b3b7c4b523c03cd71680e63cfd1c662 466 Pfam PF02321 Outer membrane efflux protein 284 462 1.3E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS00580 5b3b7c4b523c03cd71680e63cfd1c662 466 SUPERFAMILY SSF56954 2 33 5.89E-109 T 28-03-2018 CJD35_RS00580 5b3b7c4b523c03cd71680e63cfd1c662 466 SUPERFAMILY SSF56954 57 465 5.89E-109 T 28-03-2018 CJD35_RS00370 1b9068ef1efa86f1e56b25ba857f4dad 145 SUPERFAMILY SSF50789 3 112 1.57E-12 T 28-03-2018 CJD35_RS00370 1b9068ef1efa86f1e56b25ba857f4dad 145 Pfam PF04586 Caudovirus prohead serine protease 6 130 8.3E-26 T 28-03-2018 IPR006433 Prohead protease CJD35_RS00370 1b9068ef1efa86f1e56b25ba857f4dad 145 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 7 131 5.4E-21 T 28-03-2018 IPR006433 Prohead protease CJD35_RS00370 1b9068ef1efa86f1e56b25ba857f4dad 145 Gene3D G3DSA:3.20.16.10 1 137 4.3E-37 T 28-03-2018 IPR035443 Herpesvirus/Caudovirus protease domain CJD35_RS19450 3640ee24bde67d06849dcdd996e85b3b 384 Gene3D G3DSA:3.40.710.10 1 384 4.7E-90 T 28-03-2018 CJD35_RS19450 3640ee24bde67d06849dcdd996e85b3b 384 Pfam PF00144 Beta-lactamase 15 368 3.5E-69 T 28-03-2018 IPR001466 Beta-lactamase-related CJD35_RS19450 3640ee24bde67d06849dcdd996e85b3b 384 SUPERFAMILY SSF56601 10 383 1.77E-92 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS19440 3640ee24bde67d06849dcdd996e85b3b 384 Gene3D G3DSA:3.40.710.10 1 384 4.7E-90 T 28-03-2018 CJD35_RS19440 3640ee24bde67d06849dcdd996e85b3b 384 Pfam PF00144 Beta-lactamase 15 368 3.5E-69 T 28-03-2018 IPR001466 Beta-lactamase-related CJD35_RS19440 3640ee24bde67d06849dcdd996e85b3b 384 SUPERFAMILY SSF56601 10 383 1.77E-92 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS12460 14f017034bbc5de1579bd44582c7e62b 383 Pfam PF12698 ABC-2 family transporter protein 233 374 1.2E-8 T 28-03-2018 CJD35_RS12460 14f017034bbc5de1579bd44582c7e62b 383 Pfam PF12698 ABC-2 family transporter protein 28 191 6.5E-9 T 28-03-2018 CJD35_RS12460 14f017034bbc5de1579bd44582c7e62b 383 Gene3D G3DSA:3.40.1710.10 48 199 1.6E-13 T 28-03-2018 CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 Gene3D G3DSA:2.140.10.10 613 781 2.7E-8 T 28-03-2018 CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 Gene3D G3DSA:2.140.10.10 147 611 2.3E-83 T 28-03-2018 CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 SUPERFAMILY SSF50998 553 770 9.55E-140 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 SUPERFAMILY SSF50998 155 516 9.55E-140 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 5 783 0.0 T 28-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 SMART SM00564 404 452 320.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 SMART SM00564 638 677 300.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 SMART SM00564 333 374 0.033 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 SMART SM00564 209 240 0.14 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 SMART SM00564 276 308 74.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 SMART SM00564 705 738 1.4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 398 419 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 Pfam PF01011 PQQ enzyme repeat 715 744 7.7E-5 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 Pfam PF13360 PQQ-like domain 209 303 3.2E-4 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS06445 a307f2158c959b4fa379e1b2bf173583 791 Pfam PF13360 PQQ-like domain 356 477 3.4E-4 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS01190 15a634503af8e7509f9e981abbf71ad8 130 SUPERFAMILY SSF46785 11 120 2.2E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS01190 15a634503af8e7509f9e981abbf71ad8 130 Pfam PF01638 HxlR-like helix-turn-helix 26 111 4.1E-24 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type CJD35_RS01190 15a634503af8e7509f9e981abbf71ad8 130 Gene3D G3DSA:1.10.10.10 8 130 1.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 PRINTS PR00046 Major sigma-70 factor signature 208 223 4.5E-9 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 PRINTS PR00046 Major sigma-70 factor signature 223 234 4.5E-9 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 PRINTS PR00046 Major sigma-70 factor signature 191 203 4.5E-9 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 PRINTS PR00046 Major sigma-70 factor signature 51 64 4.5E-9 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 Gene3D G3DSA:1.10.10.10 154 241 2.9E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 24 239 3.6E-64 T 28-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 Gene3D G3DSA:1.10.10.10 96 145 1.8E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 Gene3D G3DSA:1.10.1740.10 12 93 1.9E-17 T 28-03-2018 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 SUPERFAMILY SSF88659 97 161 6.54E-10 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 Pfam PF04539 Sigma-70 region 3 105 155 1.0E-7 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 SUPERFAMILY SSF88659 161 241 2.06E-17 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 Pfam PF04545 Sigma-70, region 4 188 236 1.1E-15 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 238 7.2E-28 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 SUPERFAMILY SSF88946 20 93 3.79E-19 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS03170 89efde88a779e290a671e469b60fff02 242 Pfam PF04542 Sigma-70 region 2 24 94 4.7E-14 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS17295 29895c25b9e49741a7731198bd23bfee 467 PIRSF PIRSF006446 2 458 3.6E-198 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CJD35_RS17295 29895c25b9e49741a7731198bd23bfee 467 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 10 438 1.5E-159 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CJD35_RS09470 b958ab6dd4077b4fe4785bb000a602d2 212 Gene3D G3DSA:1.25.40.10 122 176 7.9E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS09470 b958ab6dd4077b4fe4785bb000a602d2 212 SMART SM00028 73 106 6.8 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS09470 b958ab6dd4077b4fe4785bb000a602d2 212 SMART SM00028 107 140 0.1 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS09470 b958ab6dd4077b4fe4785bb000a602d2 212 SUPERFAMILY SSF48452 74 182 1.94E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS09470 b958ab6dd4077b4fe4785bb000a602d2 212 Gene3D G3DSA:1.25.40.10 13 121 3.3E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS09470 b958ab6dd4077b4fe4785bb000a602d2 212 Pfam PF13428 Tetratricopeptide repeat 76 115 3.6E-5 T 28-03-2018 CJD35_RS02460 7570cc38d931501d10ba2ba5fdd4e44f 382 SUPERFAMILY SSF82861 112 195 4.18E-11 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CJD35_RS02460 7570cc38d931501d10ba2ba5fdd4e44f 382 SUPERFAMILY SSF82689 265 360 1.44E-14 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CJD35_RS02460 7570cc38d931501d10ba2ba5fdd4e44f 382 Gene3D G3DSA:3.30.70.100 263 358 1.4E-13 T 28-03-2018 CJD35_RS02460 7570cc38d931501d10ba2ba5fdd4e44f 382 SUPERFAMILY SSF50182 197 261 5.89E-10 T 28-03-2018 IPR010920 LSM domain CJD35_RS02460 7570cc38d931501d10ba2ba5fdd4e44f 382 Pfam PF00924 Mechanosensitive ion channel 155 353 3.5E-38 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CJD35_RS02460 7570cc38d931501d10ba2ba5fdd4e44f 382 Gene3D G3DSA:2.30.30.60 212 261 3.7E-7 T 28-03-2018 CJD35_RS14430 b988c5ee852a288cefd765b5727e85ab 411 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 21 411 48.255 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14430 b988c5ee852a288cefd765b5727e85ab 411 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 140 411 2.9E-117 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14430 b988c5ee852a288cefd765b5727e85ab 411 SUPERFAMILY SSF56762 36 411 1.7E-132 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14430 b988c5ee852a288cefd765b5727e85ab 411 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 63 74 - T 28-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14430 b988c5ee852a288cefd765b5727e85ab 411 Gene3D G3DSA:1.10.645.10 23 188 7.0E-55 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14430 b988c5ee852a288cefd765b5727e85ab 411 Gene3D G3DSA:1.10.645.10 204 401 3.6E-45 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14430 b988c5ee852a288cefd765b5727e85ab 411 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 26 411 4.2E-172 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS10875 459c75f1c2a9ea3bac150c4545162db6 201 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 17 200 36.664 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CJD35_RS10875 459c75f1c2a9ea3bac150c4545162db6 201 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 127 137 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CJD35_RS10875 459c75f1c2a9ea3bac150c4545162db6 201 SUPERFAMILY SSF55620 12 200 1.48E-71 T 28-03-2018 CJD35_RS10875 459c75f1c2a9ea3bac150c4545162db6 201 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 22 200 3.7E-61 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CJD35_RS10875 459c75f1c2a9ea3bac150c4545162db6 201 Gene3D G3DSA:1.10.286.10 19 67 8.4E-19 T 28-03-2018 CJD35_RS10875 459c75f1c2a9ea3bac150c4545162db6 201 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 79 95 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CJD35_RS10875 459c75f1c2a9ea3bac150c4545162db6 201 Gene3D G3DSA:3.30.1130.10 68 201 5.3E-53 T 28-03-2018 CJD35_RS10875 459c75f1c2a9ea3bac150c4545162db6 201 Pfam PF01227 GTP cyclohydrolase I 22 199 1.2E-68 T 28-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CJD35_RS12300 8e3399eacc6e6d1312100530b98f8afa 327 Gene3D G3DSA:3.10.290.10 84 145 5.2E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS12300 8e3399eacc6e6d1312100530b98f8afa 327 SUPERFAMILY SSF55174 86 142 1.35E-10 T 28-03-2018 CJD35_RS12300 8e3399eacc6e6d1312100530b98f8afa 327 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 187 201 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CJD35_RS12300 8e3399eacc6e6d1312100530b98f8afa 327 Pfam PF00849 RNA pseudouridylate synthase 150 282 2.9E-9 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS12300 8e3399eacc6e6d1312100530b98f8afa 327 SUPERFAMILY SSF55120 150 316 5.14E-37 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS12300 8e3399eacc6e6d1312100530b98f8afa 327 Pfam PF01479 S4 domain 89 128 2.4E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS12300 8e3399eacc6e6d1312100530b98f8afa 327 Gene3D G3DSA:3.30.70.580 147 229 8.4E-13 T 28-03-2018 CJD35_RS12300 8e3399eacc6e6d1312100530b98f8afa 327 SMART SM00363 89 146 2.3E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS12300 8e3399eacc6e6d1312100530b98f8afa 327 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 154 311 5.4E-40 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CJD35_RS12300 8e3399eacc6e6d1312100530b98f8afa 327 Gene3D G3DSA:3.30.70.1560 230 299 5.9E-18 T 28-03-2018 CJD35_RS15470 41bdeee22aea9cf9fe0cd2a43ec2c486 334 Gene3D G3DSA:3.20.20.30 18 272 2.4E-52 T 28-03-2018 CJD35_RS15470 41bdeee22aea9cf9fe0cd2a43ec2c486 334 TIGRFAM TIGR03619 F420_Rv2161c: probable F420-dependent oxidoreductase, Rv2161c family 62 307 1.2E-56 T 28-03-2018 IPR019921 Luciferase-like, F420-dependent oxidoreductase, Rv2161c, predicted CJD35_RS15470 41bdeee22aea9cf9fe0cd2a43ec2c486 334 SUPERFAMILY SSF51679 46 334 4.58E-58 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS15470 41bdeee22aea9cf9fe0cd2a43ec2c486 334 Gene3D G3DSA:3.20.20.30 273 334 0.12 T 28-03-2018 CJD35_RS15470 41bdeee22aea9cf9fe0cd2a43ec2c486 334 Pfam PF00296 Luciferase-like monooxygenase 49 260 2.0E-40 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS19465 f4b856f9afcac0593c3f4dc14f4b0f06 226 Pfam PF13276 HTH-like domain 45 98 9.0E-12 T 28-03-2018 IPR025948 HTH-like domain CJD35_RS19465 f4b856f9afcac0593c3f4dc14f4b0f06 226 Gene3D G3DSA:3.30.420.10 110 203 1.0E-11 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS19465 f4b856f9afcac0593c3f4dc14f4b0f06 226 Pfam PF00665 Integrase core domain 117 186 1.4E-7 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS19465 f4b856f9afcac0593c3f4dc14f4b0f06 226 SUPERFAMILY SSF53098 113 186 1.4E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS09165 4425319bd265b9901ca3bbe6c76450cb 182 SUPERFAMILY SSF46565 80 174 5.47E-16 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS09165 4425319bd265b9901ca3bbe6c76450cb 182 SMART SM00271 113 171 4.1E-13 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS09165 4425319bd265b9901ca3bbe6c76450cb 182 Pfam PF00226 DnaJ domain 117 174 2.0E-14 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS09165 4425319bd265b9901ca3bbe6c76450cb 182 Gene3D G3DSA:1.10.287.110 56 178 3.6E-16 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS09165 4425319bd265b9901ca3bbe6c76450cb 182 PRINTS PR00625 DnaJ domain signature 134 149 1.4E-7 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS09165 4425319bd265b9901ca3bbe6c76450cb 182 PRINTS PR00625 DnaJ domain signature 151 171 1.4E-7 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS09165 4425319bd265b9901ca3bbe6c76450cb 182 PRINTS PR00625 DnaJ domain signature 116 134 1.4E-7 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS13200 b8ce4438ef7f16b414d83661fdd58e74 433 Gene3D G3DSA:1.20.1250.20 225 433 2.1E-21 T 28-03-2018 CJD35_RS13200 b8ce4438ef7f16b414d83661fdd58e74 433 ProSitePatterns PS00216 Sugar transport proteins signature 1. 297 314 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CJD35_RS13200 b8ce4438ef7f16b414d83661fdd58e74 433 SUPERFAMILY SSF103473 14 429 6.54E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS13200 b8ce4438ef7f16b414d83661fdd58e74 433 Pfam PF00083 Sugar (and other) transporter 241 429 3.4E-12 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CJD35_RS13200 b8ce4438ef7f16b414d83661fdd58e74 433 Pfam PF00083 Sugar (and other) transporter 24 224 6.8E-26 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CJD35_RS13200 b8ce4438ef7f16b414d83661fdd58e74 433 Gene3D G3DSA:1.20.1250.20 9 224 1.1E-23 T 28-03-2018 CJD35_RS13200 b8ce4438ef7f16b414d83661fdd58e74 433 ProSitePatterns PS00217 Sugar transport proteins signature 2. 128 153 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CJD35_RS10845 e3a1374ccf5556917e7b0e66b4b30200 158 SUPERFAMILY SSF55826 6 151 4.19E-38 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CJD35_RS10845 e3a1374ccf5556917e7b0e66b4b30200 158 Gene3D G3DSA:3.90.960.10 1 153 9.8E-37 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CJD35_RS10845 e3a1374ccf5556917e7b0e66b4b30200 158 Pfam PF04073 Aminoacyl-tRNA editing domain 26 141 3.8E-28 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CJD35_RS01510 3f716a0e093e227762debfa28b30aa5a 246 Gene3D G3DSA:3.40.1180.10 6 246 4.9E-85 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CJD35_RS01510 3f716a0e093e227762debfa28b30aa5a 246 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 190 207 - T 28-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 CJD35_RS01510 3f716a0e093e227762debfa28b30aa5a 246 Pfam PF01255 Putative undecaprenyl diphosphate synthase 24 244 1.5E-76 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CJD35_RS01510 3f716a0e093e227762debfa28b30aa5a 246 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 19 244 4.3E-83 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CJD35_RS01510 3f716a0e093e227762debfa28b30aa5a 246 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 17 245 37.881 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CJD35_RS01510 3f716a0e093e227762debfa28b30aa5a 246 SUPERFAMILY SSF64005 19 239 1.7E-80 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CJD35_RS19015 a08a632a54e6a7d304c4d2294106429b 144 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 54 144 8.0E-28 T 28-03-2018 IPR004914 Antirestriction protein CJD35_RS19015 a08a632a54e6a7d304c4d2294106429b 144 Pfam PF03230 Antirestriction protein 54 144 3.2E-36 T 28-03-2018 IPR004914 Antirestriction protein CJD35_RS03030 88a5d0d4abe8c35c53da6fef1f3c9602 230 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 7 224 53.583 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CJD35_RS03030 88a5d0d4abe8c35c53da6fef1f3c9602 230 Pfam PF06508 Queuosine biosynthesis protein QueC 9 218 3.7E-70 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CJD35_RS03030 88a5d0d4abe8c35c53da6fef1f3c9602 230 PIRSF PIRSF006293 5 230 2.3E-70 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CJD35_RS03030 88a5d0d4abe8c35c53da6fef1f3c9602 230 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 9 211 2.7E-56 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CJD35_RS03030 88a5d0d4abe8c35c53da6fef1f3c9602 230 Gene3D G3DSA:3.40.50.620 6 230 1.1E-48 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS03030 88a5d0d4abe8c35c53da6fef1f3c9602 230 SUPERFAMILY SSF52402 9 227 4.19E-60 T 28-03-2018 CJD35_RS07410 d329a4c86223982b537229a848424961 308 Gene3D G3DSA:3.40.50.720 1 129 1.2E-25 T 28-03-2018 CJD35_RS07410 d329a4c86223982b537229a848424961 308 Gene3D G3DSA:3.30.360.10 130 308 1.6E-27 T 28-03-2018 CJD35_RS07410 d329a4c86223982b537229a848424961 308 SUPERFAMILY SSF51735 2 166 1.75E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS07410 d329a4c86223982b537229a848424961 308 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 114 5.6E-16 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CJD35_RS16345 9bd61229f6e6a74141d44f12180b4798 252 Pfam PF09339 IclR helix-turn-helix domain 11 61 2.5E-7 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CJD35_RS16345 9bd61229f6e6a74141d44f12180b4798 252 Pfam PF01614 Bacterial transcriptional regulator 123 241 3.4E-23 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CJD35_RS16345 9bd61229f6e6a74141d44f12180b4798 252 Gene3D G3DSA:1.10.10.10 1 77 4.0E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16345 9bd61229f6e6a74141d44f12180b4798 252 SUPERFAMILY SSF46785 9 74 3.48E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16345 9bd61229f6e6a74141d44f12180b4798 252 SUPERFAMILY SSF55781 81 242 5.82E-37 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS16345 9bd61229f6e6a74141d44f12180b4798 252 Gene3D G3DSA:3.30.450.40 78 248 1.2E-39 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 Gene3D G3DSA:3.40.50.2300 1 144 1.5E-23 T 28-03-2018 CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 Gene3D G3DSA:1.10.8.60 323 393 8.1E-23 T 28-03-2018 CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 453 3.2E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 416 433 3.2E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 Gene3D G3DSA:3.40.50.300 147 322 6.3E-25 T 28-03-2018 CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 Pfam PF02954 Bacterial regulatory protein, Fis family 410 450 1.6E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 SUPERFAMILY SSF52540 153 391 5.62E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 SMART SM00448 6 120 1.3E-13 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 TIGRFAM TIGR02915 PEP_resp_reg: PEP-CTERM-box response regulator transcription factor 8 453 1.1E-201 T 28-03-2018 IPR014264 Signal transduction response regulator, PEP-CTERM system, putative CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 Pfam PF00158 Sigma-54 interaction domain 151 316 1.1E-68 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 SUPERFAMILY SSF46689 363 452 1.82E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 363 372 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 236 251 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 Gene3D G3DSA:1.10.10.60 401 454 6.3E-16 T 28-03-2018 CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 SMART SM00382 170 313 3.6E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 SUPERFAMILY SSF52172 5 194 8.4E-31 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS01105 bf39d30175c8b02443c615a16999de5b 454 Pfam PF00072 Response regulator receiver domain 9 117 3.4E-16 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02535 922769463ffabb3cd25c32b9f73a2ab9 135 SUPERFAMILY SSF54736 50 134 5.23E-33 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CJD35_RS02535 922769463ffabb3cd25c32b9f73a2ab9 135 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 52 131 1.2E-34 T 28-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CJD35_RS02535 922769463ffabb3cd25c32b9f73a2ab9 135 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 44 130 29.177 T 28-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CJD35_RS02535 922769463ffabb3cd25c32b9f73a2ab9 135 Gene3D G3DSA:3.30.1390.10 43 134 3.3E-36 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CJD35_RS04880 778330b6d61cecacfc0fdb14112406ca 457 PIRSF PIRSF017901 1 457 2.7E-178 T 28-03-2018 IPR035434 Glutamate--cysteine ligase, bacteria and plant GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CJD35_RS04880 778330b6d61cecacfc0fdb14112406ca 457 TIGRFAM TIGR01436 glu_cys_lig_pln: glutamate--cysteine ligase 14 457 5.2E-217 T 28-03-2018 IPR011556 Glutamate--cysteine ligase, plant-type GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CJD35_RS04880 778330b6d61cecacfc0fdb14112406ca 457 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 54 360 3.1E-98 T 28-03-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CJD35_RS04880 778330b6d61cecacfc0fdb14112406ca 457 SUPERFAMILY SSF55931 306 452 1.18E-67 T 28-03-2018 CJD35_RS04880 778330b6d61cecacfc0fdb14112406ca 457 SUPERFAMILY SSF55931 27 267 1.18E-67 T 28-03-2018 CJD35_RS05335 a2df712f9819fcfa7e5d7537c6c993bc 470 Pfam PF02417 Chromate transporter 26 188 6.1E-31 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CJD35_RS05335 a2df712f9819fcfa7e5d7537c6c993bc 470 Pfam PF02417 Chromate transporter 265 459 1.9E-32 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CJD35_RS05335 a2df712f9819fcfa7e5d7537c6c993bc 470 TIGRFAM TIGR00937 2A51: chromate efflux transporter 31 409 1.6E-64 T 28-03-2018 IPR014047 Chromate transporter, long chain CJD35_RS05335 a2df712f9819fcfa7e5d7537c6c993bc 470 PIRSF PIRSF004810 5 467 6.2E-128 T 28-03-2018 IPR014047 Chromate transporter, long chain CJD35_RS20695 48bb866ded28e1a928d577a91369d51a 139 SUPERFAMILY SSF158634 1 138 2.22E-40 T 28-03-2018 CJD35_RS20695 48bb866ded28e1a928d577a91369d51a 139 Pfam PF12200 Domain of unknown function (DUF3597) 3 134 1.2E-40 T 28-03-2018 IPR022016 Domain of unknown function DUF3597 CJD35_RS07000 4338553dc3162b258593933c28a9ad05 414 Gene3D G3DSA:2.60.40.10 219 347 0.0021 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS07000 4338553dc3162b258593933c28a9ad05 414 PRINTS PR01217 Proline rich extensin signature 114 130 5.9E-9 T 28-03-2018 CJD35_RS07000 4338553dc3162b258593933c28a9ad05 414 PRINTS PR01217 Proline rich extensin signature 85 106 5.9E-9 T 28-03-2018 CJD35_RS07000 4338553dc3162b258593933c28a9ad05 414 PRINTS PR01217 Proline rich extensin signature 131 148 5.9E-9 T 28-03-2018 CJD35_RS07000 4338553dc3162b258593933c28a9ad05 414 PRINTS PR01217 Proline rich extensin signature 33 45 5.9E-9 T 28-03-2018 CJD35_RS07000 4338553dc3162b258593933c28a9ad05 414 PRINTS PR01217 Proline rich extensin signature 73 85 5.9E-9 T 28-03-2018 CJD35_RS07000 4338553dc3162b258593933c28a9ad05 414 PRINTS PR01217 Proline rich extensin signature 49 65 5.9E-9 T 28-03-2018 CJD35_RS19600 387d7c51ac56a8c9687057fc280ac077 338 SUPERFAMILY SSF51430 7 312 5.37E-87 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS19600 387d7c51ac56a8c9687057fc280ac077 338 Gene3D G3DSA:3.20.20.100 6 332 5.7E-90 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS19600 387d7c51ac56a8c9687057fc280ac077 338 Pfam PF00248 Aldo/keto reductase family 18 307 6.2E-67 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS16525 4255a6ed7c3cba7a1d3dd3738ffa8fe0 101 Gene3D G3DSA:3.10.20.30 9 97 1.2E-5 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS16525 4255a6ed7c3cba7a1d3dd3738ffa8fe0 101 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 14 91 1.7E-20 T 28-03-2018 CJD35_RS16525 4255a6ed7c3cba7a1d3dd3738ffa8fe0 101 SUPERFAMILY SSF54292 15 95 2.36E-18 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS09600 4a016a96991a8ead00b864fab657d587 470 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 2 417 3.8E-81 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CJD35_RS09600 4a016a96991a8ead00b864fab657d587 470 Pfam PF02321 Outer membrane efflux protein 5 191 5.5E-29 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS09600 4a016a96991a8ead00b864fab657d587 470 Pfam PF02321 Outer membrane efflux protein 211 408 1.8E-29 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS09600 4a016a96991a8ead00b864fab657d587 470 SUPERFAMILY SSF56954 4 415 7.19E-79 T 28-03-2018 CJD35_RS09600 4a016a96991a8ead00b864fab657d587 470 Gene3D G3DSA:1.20.1600.10 2 410 3.5E-71 T 28-03-2018 CJD35_RS17575 15530be2ffa03b023fbbe66351f126d2 489 Gene3D G3DSA:3.40.605.10 2 271 2.9E-71 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS17575 15530be2ffa03b023fbbe66351f126d2 489 Gene3D G3DSA:3.40.309.10 272 466 1.4E-58 T 28-03-2018 CJD35_RS17575 15530be2ffa03b023fbbe66351f126d2 489 SUPERFAMILY SSF53720 9 483 3.67E-134 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS17575 15530be2ffa03b023fbbe66351f126d2 489 Pfam PF00171 Aldehyde dehydrogenase family 20 479 2.0E-140 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS17575 15530be2ffa03b023fbbe66351f126d2 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS19810 500b32e7e182d719f10562a18c5e019a 391 Gene3D G3DSA:3.40.50.300 19 267 1.8E-9 T 28-03-2018 CJD35_RS19810 500b32e7e182d719f10562a18c5e019a 391 Pfam PF13191 AAA ATPase domain 19 202 6.4E-18 T 28-03-2018 CJD35_RS19810 500b32e7e182d719f10562a18c5e019a 391 SUPERFAMILY SSF52540 6 285 6.45E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20375 ce4b6b4ed983effc9478ca0ad38ede18 480 Pfam PF00589 Phage integrase family 214 406 1.3E-9 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20375 ce4b6b4ed983effc9478ca0ad38ede18 480 Gene3D G3DSA:1.10.443.10 190 459 2.8E-26 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20375 ce4b6b4ed983effc9478ca0ad38ede18 480 SUPERFAMILY SSF56349 65 288 3.18E-6 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS20375 ce4b6b4ed983effc9478ca0ad38ede18 480 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 54 141 1.6E-16 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS20375 ce4b6b4ed983effc9478ca0ad38ede18 480 Gene3D G3DSA:1.10.150.130 48 162 1.6E-12 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20375 ce4b6b4ed983effc9478ca0ad38ede18 480 SUPERFAMILY SSF56349 348 457 3.53E-22 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS20375 ce4b6b4ed983effc9478ca0ad38ede18 480 SUPERFAMILY SSF56349 211 286 3.53E-22 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS04255 ab101d035afab5fffcdc76da4faf8843 423 Gene3D G3DSA:1.20.1250.20 218 420 1.0E-13 T 28-03-2018 CJD35_RS04255 ab101d035afab5fffcdc76da4faf8843 423 SUPERFAMILY SSF103473 9 417 3.92E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS04255 ab101d035afab5fffcdc76da4faf8843 423 Gene3D G3DSA:1.20.1250.20 13 208 4.7E-32 T 28-03-2018 CJD35_RS04255 ab101d035afab5fffcdc76da4faf8843 423 Pfam PF07690 Major Facilitator Superfamily 25 368 8.2E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS04105 4cf2c095a3d2366f49433faee7301e67 168 Pfam PF05257 CHAP domain 18 79 2.5E-9 T 28-03-2018 IPR007921 CHAP domain CJD35_RS04105 4cf2c095a3d2366f49433faee7301e67 168 SUPERFAMILY SSF54001 11 137 5.3E-21 T 28-03-2018 CJD35_RS04105 4cf2c095a3d2366f49433faee7301e67 168 Gene3D G3DSA:3.90.1720.10 14 119 1.7E-4 T 28-03-2018 CJD35_RS03160 5e40ba4c21c79b4ee29327819cc16700 495 Gene3D G3DSA:2.60.40.10 399 495 7.6E-7 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS03160 5e40ba4c21c79b4ee29327819cc16700 495 SUPERFAMILY SSF81296 400 494 4.06E-7 T 28-03-2018 IPR014756 Immunoglobulin E-set CJD35_RS03160 5e40ba4c21c79b4ee29327819cc16700 495 SUPERFAMILY SSF74650 32 393 1.82E-118 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CJD35_RS03160 5e40ba4c21c79b4ee29327819cc16700 495 Gene3D G3DSA:2.70.98.10 32 394 2.2E-133 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CJD35_RS03160 5e40ba4c21c79b4ee29327819cc16700 495 PIRSF PIRSF006281 2 494 6.2E-130 T 28-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D CJD35_RS03160 5e40ba4c21c79b4ee29327819cc16700 495 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 32 491 4.0E-146 T 28-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 CJD35_RS02650 5485e55ec456313e4615ebf184b68df9 344 SMART SM00400 34 83 7.5E-8 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS02650 5485e55ec456313e4615ebf184b68df9 344 Pfam PF01807 CHC2 zinc finger 33 84 1.3E-10 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS02650 5485e55ec456313e4615ebf184b68df9 344 Gene3D G3DSA:3.90.980.10 121 234 7.8E-9 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CJD35_RS02650 5485e55ec456313e4615ebf184b68df9 344 SUPERFAMILY SSF56731 130 340 2.09E-17 T 28-03-2018 CJD35_RS02650 5485e55ec456313e4615ebf184b68df9 344 Gene3D G3DSA:3.90.580.10 2 90 2.5E-19 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS02650 5485e55ec456313e4615ebf184b68df9 344 SUPERFAMILY SSF57783 7 86 2.55E-17 T 28-03-2018 CJD35_RS02650 5485e55ec456313e4615ebf184b68df9 344 Pfam PF13155 Toprim-like 254 338 4.3E-9 T 28-03-2018 CJD35_RS02650 5485e55ec456313e4615ebf184b68df9 344 Gene3D G3DSA:3.40.1360.10 237 344 4.3E-13 T 28-03-2018 CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 Gene3D G3DSA:2.130.10.10 364 455 6.3E-4 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 SMART SM00564 123 154 6.2E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 SMART SM00564 210 242 79.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 SMART SM00564 345 376 140.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 SMART SM00564 171 202 0.6 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 SMART SM00564 307 338 570.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 SMART SM00564 395 426 53.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 Gene3D G3DSA:2.140.10.10 243 363 2.0E-16 T 28-03-2018 CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 Gene3D G3DSA:2.140.10.10 67 242 2.5E-31 T 28-03-2018 CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 Pfam PF13360 PQQ-like domain 167 374 6.8E-51 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 Pfam PF13360 PQQ-like domain 97 160 1.6E-7 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 Pfam PF13360 PQQ-like domain 380 454 3.9E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS09655 3d81204c96963e027caa9008c91ca10f 455 SUPERFAMILY SSF50998 71 446 2.16E-80 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CJD35_RS08105 94832e37bc50424e0cf9c3007fe53a34 228 SMART SM00986 53 213 1.9E-38 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS08105 94832e37bc50424e0cf9c3007fe53a34 228 SUPERFAMILY SSF52141 5 224 1.74E-89 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS08105 94832e37bc50424e0cf9c3007fe53a34 228 Gene3D G3DSA:3.40.470.10 1 226 7.1E-100 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS08105 94832e37bc50424e0cf9c3007fe53a34 228 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 8 224 39.469 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS08105 94832e37bc50424e0cf9c3007fe53a34 228 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 9 217 6.0E-78 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS08105 94832e37bc50424e0cf9c3007fe53a34 228 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 61 70 - T 28-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS08105 94832e37bc50424e0cf9c3007fe53a34 228 Pfam PF03167 Uracil DNA glycosylase superfamily 58 212 7.1E-23 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CJD35_RS08105 94832e37bc50424e0cf9c3007fe53a34 228 SMART SM00987 53 213 1.9E-38 T 28-03-2018 CJD35_RS10720 1a1365d42ef6e95fcc7aa6b230ab1846 407 Pfam PF01979 Amidohydrolase family 141 404 1.0E-11 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS10720 1a1365d42ef6e95fcc7aa6b230ab1846 407 Gene3D G3DSA:2.30.40.10 1 56 2.2E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS10720 1a1365d42ef6e95fcc7aa6b230ab1846 407 Gene3D G3DSA:3.20.20.140 57 399 1.2E-69 T 28-03-2018 CJD35_RS10720 1a1365d42ef6e95fcc7aa6b230ab1846 407 SUPERFAMILY SSF51556 55 353 5.92E-75 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS10720 1a1365d42ef6e95fcc7aa6b230ab1846 407 SUPERFAMILY SSF51338 3 55 3.55E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS10720 1a1365d42ef6e95fcc7aa6b230ab1846 407 SUPERFAMILY SSF51338 353 405 3.55E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS16845 a67565a6daf1ebad488d10a9d918e520 290 SUPERFAMILY SSF46689 241 286 6.72E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS16845 a67565a6daf1ebad488d10a9d918e520 290 SMART SM00342 202 285 2.4E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS16845 a67565a6daf1ebad488d10a9d918e520 290 Gene3D G3DSA:1.10.10.60 240 289 5.2E-15 T 28-03-2018 CJD35_RS16845 a67565a6daf1ebad488d10a9d918e520 290 SUPERFAMILY SSF51215 35 170 1.18E-11 T 28-03-2018 CJD35_RS16845 a67565a6daf1ebad488d10a9d918e520 290 Gene3D G3DSA:1.10.10.60 176 238 4.2E-5 T 28-03-2018 CJD35_RS16845 a67565a6daf1ebad488d10a9d918e520 290 Pfam PF02311 AraC-like ligand binding domain 36 163 1.8E-5 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CJD35_RS16845 a67565a6daf1ebad488d10a9d918e520 290 Pfam PF12833 Helix-turn-helix domain 209 286 3.1E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS16845 a67565a6daf1ebad488d10a9d918e520 290 Gene3D G3DSA:2.60.120.280 16 173 2.2E-14 T 28-03-2018 CJD35_RS16140 0fdf1c0becfc0913a60f34102ca26174 264 Gene3D G3DSA:3.30.200.20 3 77 2.9E-7 T 28-03-2018 CJD35_RS16140 0fdf1c0becfc0913a60f34102ca26174 264 Gene3D G3DSA:1.10.510.10 148 257 4.1E-13 T 28-03-2018 CJD35_RS16140 0fdf1c0becfc0913a60f34102ca26174 264 PIRSF PIRSF006221 2 262 3.0E-42 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CJD35_RS16140 0fdf1c0becfc0913a60f34102ca26174 264 Pfam PF03881 Fructosamine kinase 14 259 4.8E-41 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CJD35_RS16140 0fdf1c0becfc0913a60f34102ca26174 264 SUPERFAMILY SSF56112 15 259 4.5E-41 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS01230 5f03db3762d719fa69d81091cf6e63e4 308 Gene3D G3DSA:3.30.2350.10 1 234 3.1E-75 T 28-03-2018 CJD35_RS01230 5f03db3762d719fa69d81091cf6e63e4 308 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 185 240 3.7E-12 T 28-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CJD35_RS01230 5f03db3762d719fa69d81091cf6e63e4 308 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 184 8.9E-47 T 28-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CJD35_RS01230 5f03db3762d719fa69d81091cf6e63e4 308 SUPERFAMILY SSF55120 1 229 1.61E-70 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS01230 5f03db3762d719fa69d81091cf6e63e4 308 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 300 17.094 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS01230 5f03db3762d719fa69d81091cf6e63e4 308 Gene3D G3DSA:2.30.130.10 240 298 0.0014 T 28-03-2018 IPR002478 PUA domain GO:0003723 CJD35_RS01230 5f03db3762d719fa69d81091cf6e63e4 308 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 2 223 1.6E-68 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS19650 1bc04d2d8751487ca8fe789003883079 444 SUPERFAMILY SSF55961 128 303 2.28E-33 T 28-03-2018 CJD35_RS19650 1bc04d2d8751487ca8fe789003883079 444 SUPERFAMILY SSF55961 333 415 2.28E-33 T 28-03-2018 CJD35_RS19650 1bc04d2d8751487ca8fe789003883079 444 Gene3D G3DSA:2.102.10.10 18 125 6.6E-23 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS19650 1bc04d2d8751487ca8fe789003883079 444 Pfam PF00355 Rieske [2Fe-2S] domain 25 104 3.1E-16 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS19650 1bc04d2d8751487ca8fe789003883079 444 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 69 91 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CJD35_RS19650 1bc04d2d8751487ca8fe789003883079 444 SUPERFAMILY SSF50022 15 138 6.02E-34 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS19650 1bc04d2d8751487ca8fe789003883079 444 Gene3D G3DSA:3.90.380.10 126 388 2.7E-41 T 28-03-2018 CJD35_RS16335 172ddb1e6e574501a6235787e2484be9 375 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 163 345 1.4E-4 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CJD35_RS16335 172ddb1e6e574501a6235787e2484be9 375 SUPERFAMILY SSF51726 5 346 2.09E-54 T 28-03-2018 CJD35_RS16335 172ddb1e6e574501a6235787e2484be9 375 Gene3D G3DSA:3.20.20.210 1 375 5.7E-71 T 28-03-2018 CJD35_RS10265 0ae6928522ba4d7a1423ad1a9f827f37 213 Pfam PF01351 Ribonuclease HII 30 206 1.2E-39 T 28-03-2018 IPR024567 Ribonuclease HII/HIII domain CJD35_RS10265 0ae6928522ba4d7a1423ad1a9f827f37 213 SUPERFAMILY SSF53098 23 211 6.22E-67 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS10265 0ae6928522ba4d7a1423ad1a9f827f37 213 Hamap MF_00052_B Ribonuclease HII [rnhB]. 28 207 36.035 T 28-03-2018 IPR022898 Ribonuclease HII GO:0004523 CJD35_RS10265 0ae6928522ba4d7a1423ad1a9f827f37 213 Gene3D G3DSA:3.30.420.10 12 212 2.4E-69 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS04520 6d73c0e4d77b8f62b369c87ad95d3430 480 Gene3D G3DSA:3.40.1160.10 6 308 2.5E-38 T 28-03-2018 CJD35_RS04520 6d73c0e4d77b8f62b369c87ad95d3430 480 Pfam PF13840 ACT domain 404 464 2.1E-6 T 28-03-2018 IPR027795 GATS-like ACT domain CJD35_RS04520 6d73c0e4d77b8f62b369c87ad95d3430 480 Gene3D G3DSA:3.30.70.260 399 469 1.1E-11 T 28-03-2018 CJD35_RS04520 6d73c0e4d77b8f62b369c87ad95d3430 480 SUPERFAMILY SSF53633 7 314 1.1E-48 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CJD35_RS04520 6d73c0e4d77b8f62b369c87ad95d3430 480 Gene3D G3DSA:3.30.70.260 309 398 1.1E-10 T 28-03-2018 CJD35_RS04520 6d73c0e4d77b8f62b369c87ad95d3430 480 SUPERFAMILY SSF55021 404 471 9.16E-13 T 28-03-2018 CJD35_RS04520 6d73c0e4d77b8f62b369c87ad95d3430 480 Pfam PF00696 Amino acid kinase family 7 300 2.4E-25 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CJD35_RS18625 b9974541c119f44e019fedb59ac679e1 247 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 113 237 4.1E-25 T 28-03-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup CJD35_RS18625 b9974541c119f44e019fedb59ac679e1 247 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 114 224 1.8E-33 T 28-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC CJD35_RS15715 14bb893680f42fbd53fbdb6968fc9383 194 Gene3D G3DSA:2.160.10.10 1 153 4.4E-35 T 28-03-2018 CJD35_RS15715 14bb893680f42fbd53fbdb6968fc9383 194 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 76 109 9.5E-6 T 28-03-2018 IPR001451 Hexapeptide repeat CJD35_RS15715 14bb893680f42fbd53fbdb6968fc9383 194 SUPERFAMILY SSF51161 4 134 1.52E-38 T 28-03-2018 IPR011004 Trimeric LpxA-like CJD35_RS08220 3aaa8e799d630d6142b2b630559c6a70 302 PRINTS PR01217 Proline rich extensin signature 5 21 2.5E-9 T 28-03-2018 CJD35_RS08220 3aaa8e799d630d6142b2b630559c6a70 302 PRINTS PR01217 Proline rich extensin signature 65 86 2.5E-9 T 28-03-2018 CJD35_RS08220 3aaa8e799d630d6142b2b630559c6a70 302 PRINTS PR01217 Proline rich extensin signature 118 135 2.5E-9 T 28-03-2018 CJD35_RS08220 3aaa8e799d630d6142b2b630559c6a70 302 PRINTS PR01217 Proline rich extensin signature 99 115 2.5E-9 T 28-03-2018 CJD35_RS08220 3aaa8e799d630d6142b2b630559c6a70 302 PRINTS PR01217 Proline rich extensin signature 33 45 2.5E-9 T 28-03-2018 CJD35_RS08220 3aaa8e799d630d6142b2b630559c6a70 302 PRINTS PR01217 Proline rich extensin signature 189 214 2.5E-9 T 28-03-2018 CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 Gene3D G3DSA:2.30.30.30 118 176 7.4E-22 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 28-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 Pfam PF02357 Transcription termination factor nusG 3 103 3.6E-24 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 SUPERFAMILY SSF82679 1 104 4.97E-33 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 SUPERFAMILY SSF50104 121 175 3.22E-19 T 28-03-2018 IPR008991 Translation protein SH3-like domain CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 Pfam PF00467 KOW motif 127 156 1.3E-5 T 28-03-2018 IPR005824 KOW CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 4 175 2.0E-64 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 2.7E-19 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 2.7E-19 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 PRINTS PR00338 Transcription termination factor NUSG signature 56 68 2.7E-19 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 Gene3D G3DSA:3.30.70.940 1 113 1.5E-35 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 SMART SM00738 1 109 1.0E-40 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 SMART SM00739 123 150 0.0034 T 28-03-2018 IPR005824 KOW CJD35_RS10700 781903716d124e44601e54ae263a32b5 178 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 1 177 23.88 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CJD35_RS00735 777a2e53a91192bf5594875276b14ddc 342 Pfam PF04773 FecR protein 121 212 4.0E-21 T 28-03-2018 IPR006860 FecR protein CJD35_RS00735 777a2e53a91192bf5594875276b14ddc 342 PIRSF PIRSF018266 11 330 8.0E-68 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CJD35_RS00735 777a2e53a91192bf5594875276b14ddc 342 Pfam PF16220 Domain of unknown function (DUF4880) 19 58 1.4E-8 T 28-03-2018 IPR032623 FecR, N-terminal CJD35_RS15520 38a21636e4a9cb1cbee685371aaf1e09 844 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 783 797 2.5E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS15520 38a21636e4a9cb1cbee685371aaf1e09 844 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 813 825 2.5E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS15520 38a21636e4a9cb1cbee685371aaf1e09 844 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 797 813 2.5E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS15520 38a21636e4a9cb1cbee685371aaf1e09 844 SUPERFAMILY SSF46894 779 843 1.12E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS15520 38a21636e4a9cb1cbee685371aaf1e09 844 Gene3D G3DSA:1.25.40.10 234 764 8.4E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS15520 38a21636e4a9cb1cbee685371aaf1e09 844 Gene3D G3DSA:1.10.10.10 783 843 2.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS15520 38a21636e4a9cb1cbee685371aaf1e09 844 Pfam PF00196 Bacterial regulatory proteins, luxR family 783 836 9.6E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS15520 38a21636e4a9cb1cbee685371aaf1e09 844 SUPERFAMILY SSF48452 490 737 3.2E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS15520 38a21636e4a9cb1cbee685371aaf1e09 844 SMART SM00421 780 837 1.3E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS19660 c59315d3b6ea5f11b38a9dade67bc959 132 SUPERFAMILY SSF54292 31 128 2.03E-25 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS19660 c59315d3b6ea5f11b38a9dade67bc959 132 PRINTS PR00355 Adrenodoxin signature 67 77 8.0E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS19660 c59315d3b6ea5f11b38a9dade67bc959 132 PRINTS PR00355 Adrenodoxin signature 86 100 8.0E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS19660 c59315d3b6ea5f11b38a9dade67bc959 132 PRINTS PR00355 Adrenodoxin signature 109 117 8.0E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS19660 c59315d3b6ea5f11b38a9dade67bc959 132 Gene3D G3DSA:3.10.20.30 25 132 3.8E-24 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS19660 c59315d3b6ea5f11b38a9dade67bc959 132 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 37 116 1.0E-9 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS09200 a344603e8cb5b864a5fbb07db4f40eef 266 Gene3D G3DSA:3.10.310.10 116 250 8.6E-47 T 28-03-2018 CJD35_RS09200 a344603e8cb5b864a5fbb07db4f40eef 266 SUPERFAMILY SSF54506 138 261 8.57E-50 T 28-03-2018 CJD35_RS09200 a344603e8cb5b864a5fbb07db4f40eef 266 SUPERFAMILY SSF54506 3 121 7.4E-38 T 28-03-2018 CJD35_RS09200 a344603e8cb5b864a5fbb07db4f40eef 266 Gene3D G3DSA:3.10.310.10 2 115 8.5E-40 T 28-03-2018 CJD35_RS09200 a344603e8cb5b864a5fbb07db4f40eef 266 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 2 263 34.735 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CJD35_RS09200 a344603e8cb5b864a5fbb07db4f40eef 266 Pfam PF01678 Diaminopimelate epimerase 4 113 2.2E-23 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CJD35_RS09200 a344603e8cb5b864a5fbb07db4f40eef 266 Pfam PF01678 Diaminopimelate epimerase 142 256 4.5E-27 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CJD35_RS09200 a344603e8cb5b864a5fbb07db4f40eef 266 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 260 1.3E-79 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CJD35_RS09200 a344603e8cb5b864a5fbb07db4f40eef 266 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 63 77 - T 28-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 PIRSF PIRSF039102 3 56 7.4E-10 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 PIRSF PIRSF039102 49 313 4.9E-64 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 Gene3D G3DSA:3.30.1490.20 100 175 7.9E-9 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 SUPERFAMILY SSF52440 5 98 4.32E-29 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 245 276 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 Gene3D G3DSA:3.40.50.20 2 99 1.3E-30 T 28-03-2018 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 Gene3D G3DSA:3.30.470.20 176 307 2.4E-33 T 28-03-2018 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 306 31.967 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 Pfam PF01820 D-ala D-ala ligase N-terminus 7 86 1.0E-18 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 Pfam PF07478 D-ala D-ala ligase C-terminus 132 303 5.9E-39 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 65 76 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 SUPERFAMILY SSF56059 98 307 4.21E-44 T 28-03-2018 CJD35_RS10465 a4a20f09d4ffd7ad6bbd27500b890c3d 320 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 305 1.8E-78 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS20425 6b2c8e4bfb190862a793d47ce9f24041 410 Gene3D G3DSA:1.10.150.130 111 229 1.4E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20425 6b2c8e4bfb190862a793d47ce9f24041 410 Gene3D G3DSA:1.10.150.130 5 94 1.3E-5 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20425 6b2c8e4bfb190862a793d47ce9f24041 410 SUPERFAMILY SSF56349 219 400 8.54E-34 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS20425 6b2c8e4bfb190862a793d47ce9f24041 410 Gene3D G3DSA:1.10.443.10 230 407 2.9E-32 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20425 6b2c8e4bfb190862a793d47ce9f24041 410 Pfam PF00589 Phage integrase family 223 392 1.1E-22 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19220 6b2c8e4bfb190862a793d47ce9f24041 410 Gene3D G3DSA:1.10.150.130 111 229 1.4E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS19220 6b2c8e4bfb190862a793d47ce9f24041 410 Gene3D G3DSA:1.10.150.130 5 94 1.3E-5 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS19220 6b2c8e4bfb190862a793d47ce9f24041 410 SUPERFAMILY SSF56349 219 400 8.54E-34 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS19220 6b2c8e4bfb190862a793d47ce9f24041 410 Gene3D G3DSA:1.10.443.10 230 407 2.9E-32 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19220 6b2c8e4bfb190862a793d47ce9f24041 410 Pfam PF00589 Phage integrase family 223 392 1.1E-22 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS16095 6b2c8e4bfb190862a793d47ce9f24041 410 Gene3D G3DSA:1.10.150.130 111 229 1.4E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS16095 6b2c8e4bfb190862a793d47ce9f24041 410 Gene3D G3DSA:1.10.150.130 5 94 1.3E-5 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS16095 6b2c8e4bfb190862a793d47ce9f24041 410 SUPERFAMILY SSF56349 219 400 8.54E-34 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS16095 6b2c8e4bfb190862a793d47ce9f24041 410 Gene3D G3DSA:1.10.443.10 230 407 2.9E-32 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS16095 6b2c8e4bfb190862a793d47ce9f24041 410 Pfam PF00589 Phage integrase family 223 392 1.1E-22 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19415 92d5c569a1eea15acd1caeb50059c8f1 442 SUPERFAMILY SSF50022 17 138 3.67E-33 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS19415 92d5c569a1eea15acd1caeb50059c8f1 442 Pfam PF00355 Rieske [2Fe-2S] domain 25 104 2.1E-16 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS19415 92d5c569a1eea15acd1caeb50059c8f1 442 Gene3D G3DSA:3.90.380.10 129 388 4.5E-41 T 28-03-2018 CJD35_RS19415 92d5c569a1eea15acd1caeb50059c8f1 442 Gene3D G3DSA:2.102.10.10 23 128 8.0E-25 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS19415 92d5c569a1eea15acd1caeb50059c8f1 442 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 69 91 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CJD35_RS19415 92d5c569a1eea15acd1caeb50059c8f1 442 SUPERFAMILY SSF55961 127 303 1.72E-36 T 28-03-2018 CJD35_RS19415 92d5c569a1eea15acd1caeb50059c8f1 442 SUPERFAMILY SSF55961 333 415 1.72E-36 T 28-03-2018 CJD35_RS09620 4da77d7a1fd08b86136ef41fbcbbabf9 483 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 428 1.1E-57 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CJD35_RS09620 4da77d7a1fd08b86136ef41fbcbbabf9 483 Pfam PF01554 MatE 26 187 1.7E-27 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CJD35_RS09620 4da77d7a1fd08b86136ef41fbcbbabf9 483 Pfam PF01554 MatE 255 417 1.4E-20 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CJD35_RS09620 4da77d7a1fd08b86136ef41fbcbbabf9 483 PIRSF PIRSF006603 4 463 5.7E-102 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CJD35_RS00190 74f1411c9feb180b5023139a3d5654d9 314 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 43 101 1.6E-8 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CJD35_RS00190 74f1411c9feb180b5023139a3d5654d9 314 SUPERFAMILY SSF55347 116 287 1.55E-33 T 28-03-2018 CJD35_RS00190 74f1411c9feb180b5023139a3d5654d9 314 Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 306 52.185 T 28-03-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CJD35_RS00190 74f1411c9feb180b5023139a3d5654d9 314 Gene3D G3DSA:3.30.360.10 124 287 1.2E-41 T 28-03-2018 CJD35_RS00190 74f1411c9feb180b5023139a3d5654d9 314 SUPERFAMILY SSF51735 1 136 9.22E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS00190 74f1411c9feb180b5023139a3d5654d9 314 TIGRFAM TIGR01851 argC_other: N-acetyl-gamma-glutamyl-phosphate reductase 4 306 1.0E-123 T 28-03-2018 IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 GO:0003942|GO:0005737|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CJD35_RS00190 74f1411c9feb180b5023139a3d5654d9 314 SMART SM00859 4 105 2.1E-16 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CJD35_RS00190 74f1411c9feb180b5023139a3d5654d9 314 Gene3D G3DSA:3.40.50.720 1 123 1.5E-17 T 28-03-2018 CJD35_RS09340 ca242cf6a2cd19e7c89787baecc63be1 267 SUPERFAMILY SSF52172 4 126 8.97E-30 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS09340 ca242cf6a2cd19e7c89787baecc63be1 267 SMART SM00448 3 113 2.3E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS09340 ca242cf6a2cd19e7c89787baecc63be1 267 Gene3D G3DSA:3.40.50.2300 1 137 2.2E-28 T 28-03-2018 CJD35_RS09340 ca242cf6a2cd19e7c89787baecc63be1 267 Gene3D G3DSA:2.20.25.10 231 260 0.002 T 28-03-2018 CJD35_RS09340 ca242cf6a2cd19e7c89787baecc63be1 267 Gene3D G3DSA:2.40.50.40 160 230 4.7E-19 T 28-03-2018 CJD35_RS09340 ca242cf6a2cd19e7c89787baecc63be1 267 Pfam PF00072 Response regulator receiver domain 6 113 9.8E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS09340 ca242cf6a2cd19e7c89787baecc63be1 267 SMART SM00850 170 267 1.3E-33 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CJD35_RS09340 ca242cf6a2cd19e7c89787baecc63be1 267 Pfam PF04397 LytTr DNA-binding domain 171 260 3.4E-24 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CJD35_RS01245 a047c5e5bf04bb1ea15d4eff524b8993 132 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 7 123 18.265 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CJD35_RS01245 a047c5e5bf04bb1ea15d4eff524b8993 132 Gene3D G3DSA:3.30.300.20 9 123 1.6E-27 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CJD35_RS01245 a047c5e5bf04bb1ea15d4eff524b8993 132 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 11 117 6.9E-20 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CJD35_RS01245 a047c5e5bf04bb1ea15d4eff524b8993 132 SUPERFAMILY SSF89919 7 119 1.07E-26 T 28-03-2018 IPR023799 Ribosome-binding factor A domain CJD35_RS01245 a047c5e5bf04bb1ea15d4eff524b8993 132 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 14 103 9.0E-38 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CJD35_RS01245 a047c5e5bf04bb1ea15d4eff524b8993 132 Pfam PF02033 Ribosome-binding factor A 11 116 4.4E-24 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CJD35_RS02000 109478e2a5504a310311ad1959dfdd88 163 SUPERFAMILY SSF53098 1 154 1.14E-47 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS02000 109478e2a5504a310311ad1959dfdd88 163 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 155 5.5E-42 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJD35_RS02000 109478e2a5504a310311ad1959dfdd88 163 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 2.7E-43 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJD35_RS02000 109478e2a5504a310311ad1959dfdd88 163 Gene3D G3DSA:3.30.420.10 1 159 2.9E-44 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS02000 109478e2a5504a310311ad1959dfdd88 163 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 153 42.88 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJD35_RS02000 109478e2a5504a310311ad1959dfdd88 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 4.5E-32 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJD35_RS02000 109478e2a5504a310311ad1959dfdd88 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 4.5E-32 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJD35_RS02000 109478e2a5504a310311ad1959dfdd88 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 4.5E-32 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJD35_RS02000 109478e2a5504a310311ad1959dfdd88 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 4.5E-32 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJD35_RS02000 109478e2a5504a310311ad1959dfdd88 163 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 4.5E-32 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CJD35_RS02000 109478e2a5504a310311ad1959dfdd88 163 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 28-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CJD35_RS02300 62bad0b42eb1b61668424f789b22f586 163 Pfam PF00196 Bacterial regulatory proteins, luxR family 7 61 8.1E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS02300 62bad0b42eb1b61668424f789b22f586 163 SMART SM00421 5 62 1.2E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS02300 62bad0b42eb1b61668424f789b22f586 163 Gene3D G3DSA:1.10.10.10 1 66 5.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02300 62bad0b42eb1b61668424f789b22f586 163 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 22 38 6.5E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS02300 62bad0b42eb1b61668424f789b22f586 163 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 38 50 6.5E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS02300 62bad0b42eb1b61668424f789b22f586 163 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 8 22 6.5E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS02300 62bad0b42eb1b61668424f789b22f586 163 SUPERFAMILY SSF46894 4 64 3.4E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS06945 6d6a4f5f4f6c47f475523e90494ba652 479 Gene3D G3DSA:2.60.40.1610 95 220 3.1E-32 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 CJD35_RS06945 6d6a4f5f4f6c47f475523e90494ba652 479 Gene3D G3DSA:2.60.120.600 312 476 2.7E-47 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 CJD35_RS06945 6d6a4f5f4f6c47f475523e90494ba652 479 Pfam PF06742 Protein of unknown function (DUF1214) 354 459 1.0E-32 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 CJD35_RS06945 6d6a4f5f4f6c47f475523e90494ba652 479 SUPERFAMILY SSF160935 58 472 6.15E-105 T 28-03-2018 CJD35_RS06945 6d6a4f5f4f6c47f475523e90494ba652 479 Gene3D G3DSA:1.10.3360.10 221 311 3.6E-10 T 28-03-2018 CJD35_RS06945 6d6a4f5f4f6c47f475523e90494ba652 479 Pfam PF06863 Protein of unknown function (DUF1254) 96 223 6.1E-35 T 28-03-2018 IPR010679 Domain of unknown function DUF1254 CJD35_RS07880 8ceb9627d8cfd502b375b87978be5880 864 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 556 841 2.8E-90 T 28-03-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CJD35_RS07880 8ceb9627d8cfd502b375b87978be5880 864 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 30 313 2.9E-9 T 28-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CJD35_RS07880 8ceb9627d8cfd502b375b87978be5880 864 Gene3D G3DSA:3.40.630.30 661 835 1.8E-18 T 28-03-2018 CJD35_RS07880 8ceb9627d8cfd502b375b87978be5880 864 SUPERFAMILY SSF55729 662 836 1.84E-14 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS20795 0f20a5d9d19d58be54c1425f63ad8758 164 SUPERFAMILY SSF46689 9 64 5.64E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS20795 0f20a5d9d19d58be54c1425f63ad8758 164 Gene3D G3DSA:1.10.260.40 34 135 6.4E-6 T 28-03-2018 CJD35_RS20795 0f20a5d9d19d58be54c1425f63ad8758 164 Gene3D G3DSA:1.10.10.60 1 33 1.9E-7 T 28-03-2018 CJD35_RS20795 0f20a5d9d19d58be54c1425f63ad8758 164 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 57 1.7E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS11250 2ec2c5b167411b7b7c82b72dd192223e 693 Pfam PF04138 GtrA-like protein 38 148 2.4E-7 T 28-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CJD35_RS12040 d2a1901a4123b5a6cc2791f4e40c6d8c 239 PIRSF PIRSF009320 1 211 2.4E-46 T 28-03-2018 CJD35_RS12040 d2a1901a4123b5a6cc2791f4e40c6d8c 239 Gene3D G3DSA:3.40.50.300 1 61 3.4E-13 T 28-03-2018 CJD35_RS12040 d2a1901a4123b5a6cc2791f4e40c6d8c 239 Gene3D G3DSA:3.40.50.300 62 213 1.1E-17 T 28-03-2018 CJD35_RS12040 d2a1901a4123b5a6cc2791f4e40c6d8c 239 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 105 1.4E-9 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CJD35_RS12040 d2a1901a4123b5a6cc2791f4e40c6d8c 239 SUPERFAMILY SSF52540 2 206 6.95E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04825 0f142773e9b160865baa66d3d8d1d4c1 307 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 131 161 4.1E-13 T 28-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CJD35_RS04825 0f142773e9b160865baa66d3d8d1d4c1 307 Pfam PF00293 NUDIX domain 167 281 1.6E-16 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CJD35_RS04825 0f142773e9b160865baa66d3d8d1d4c1 307 SUPERFAMILY SSF55811 115 299 2.3E-46 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJD35_RS04825 0f142773e9b160865baa66d3d8d1d4c1 307 PRINTS PR00502 NUDIX hydrolase family signature 205 220 2.2E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CJD35_RS04825 0f142773e9b160865baa66d3d8d1d4c1 307 PRINTS PR00502 NUDIX hydrolase family signature 191 205 2.2E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CJD35_RS04825 0f142773e9b160865baa66d3d8d1d4c1 307 ProSitePatterns PS00893 Nudix box signature. 196 217 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CJD35_RS04825 0f142773e9b160865baa66d3d8d1d4c1 307 Gene3D G3DSA:3.90.79.10 163 303 9.3E-34 T 28-03-2018 CJD35_RS04825 0f142773e9b160865baa66d3d8d1d4c1 307 Pfam PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain 68 128 4.2E-6 T 28-03-2018 IPR015375 NADH pyrophosphatase-like, N-terminal GO:0016787 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CJD35_RS02240 9f2442a271b8dbbe64cefef7469c33a7 427 SUPERFAMILY SSF55205 1 425 1.96E-134 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CJD35_RS02240 9f2442a271b8dbbe64cefef7469c33a7 427 Gene3D G3DSA:3.65.10.10 21 228 9.9E-48 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CJD35_RS02240 9f2442a271b8dbbe64cefef7469c33a7 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 414 4.6E-96 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CJD35_RS02240 9f2442a271b8dbbe64cefef7469c33a7 427 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 424 43.628 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS02240 9f2442a271b8dbbe64cefef7469c33a7 427 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 423 9.0E-165 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS02240 9f2442a271b8dbbe64cefef7469c33a7 427 Gene3D G3DSA:3.65.10.10 229 426 6.8E-49 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CJD35_RS17200 7386294fe4027f609032b59c80d5b0ba 431 PIRSF PIRSF000521 123 429 3.9E-22 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS17200 7386294fe4027f609032b59c80d5b0ba 431 PIRSF PIRSF000521 23 144 1.8E-4 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS17200 7386294fe4027f609032b59c80d5b0ba 431 Gene3D G3DSA:3.40.640.10 55 311 8.4E-59 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS17200 7386294fe4027f609032b59c80d5b0ba 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS17200 7386294fe4027f609032b59c80d5b0ba 431 Pfam PF00202 Aminotransferase class-III 32 423 1.3E-69 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS17200 7386294fe4027f609032b59c80d5b0ba 431 Gene3D G3DSA:3.90.1150.10 312 431 3.9E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS17200 7386294fe4027f609032b59c80d5b0ba 431 SUPERFAMILY SSF53383 26 426 1.96E-89 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS17225 1f637f1db3eb9323c254dabee9ed3934 246 SMART SM00895 96 219 7.6E-9 T 28-03-2018 IPR011711 GntR, C-terminal CJD35_RS17225 1f637f1db3eb9323c254dabee9ed3934 246 SUPERFAMILY SSF46785 22 90 4.07E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17225 1f637f1db3eb9323c254dabee9ed3934 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 25 85 9.3E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS17225 1f637f1db3eb9323c254dabee9ed3934 246 SUPERFAMILY SSF48008 92 222 2.62E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CJD35_RS17225 1f637f1db3eb9323c254dabee9ed3934 246 Pfam PF07729 FCD domain 96 215 3.0E-17 T 28-03-2018 IPR011711 GntR, C-terminal CJD35_RS17225 1f637f1db3eb9323c254dabee9ed3934 246 SMART SM00345 28 86 1.7E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS17225 1f637f1db3eb9323c254dabee9ed3934 246 Gene3D G3DSA:1.10.10.10 1 81 3.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17225 1f637f1db3eb9323c254dabee9ed3934 246 Gene3D G3DSA:1.20.120.530 82 240 1.5E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 Gene3D G3DSA:3.30.2090.10 181 274 9.3E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 SUPERFAMILY SSF82866 832 1026 1.06E-42 T 28-03-2018 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 SUPERFAMILY SSF82693 565 671 3.61E-27 T 28-03-2018 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 SUPERFAMILY SSF82693 39 132 7.15E-28 T 28-03-2018 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 Gene3D G3DSA:3.30.70.1430 567 671 1.5E-20 T 28-03-2018 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1036 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 SUPERFAMILY SSF82714 183 273 4.45E-23 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 SUPERFAMILY SSF82714 722 809 1.31E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 Gene3D G3DSA:3.30.2090.10 721 808 1.8E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 Gene3D G3DSA:1.20.1640.10 809 1029 4.4E-37 T 28-03-2018 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 Gene3D G3DSA:1.20.1640.10 275 501 9.2E-45 T 28-03-2018 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.5E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.5E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.5E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.5E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.5E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.5E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.5E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.5E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.5E-103 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 Pfam PF00873 AcrB/AcrD/AcrF family 3 1026 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 SUPERFAMILY SSF82693 672 721 5.75E-22 T 28-03-2018 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 SUPERFAMILY SSF82693 809 857 5.75E-22 T 28-03-2018 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 SUPERFAMILY SSF82866 297 498 1.57E-48 T 28-03-2018 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 SUPERFAMILY SSF82693 136 183 3.87E-20 T 28-03-2018 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 SUPERFAMILY SSF82693 275 331 3.87E-20 T 28-03-2018 CJD35_RS17785 0a10522703149f3932e7b7b25552cfbe 1049 Gene3D G3DSA:3.30.70.1430 39 141 1.2E-30 T 28-03-2018 CJD35_RS15440 1313a1e0b545540bb87b8d83f17a0f69 167 Pfam PF07366 SnoaL-like polyketide cyclase 33 154 9.1E-16 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS15440 1313a1e0b545540bb87b8d83f17a0f69 167 Gene3D G3DSA:3.10.450.50 22 155 8.7E-16 T 28-03-2018 CJD35_RS15440 1313a1e0b545540bb87b8d83f17a0f69 167 SUPERFAMILY SSF54427 23 161 1.34E-23 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS05255 3855e3a94dd50ecaafea99aedfaac8ee 278 Pfam PF05168 HEPN domain 142 262 1.3E-8 T 28-03-2018 IPR007842 HEPN domain CJD35_RS05255 3855e3a94dd50ecaafea99aedfaac8ee 278 SMART SM00748 144 264 1.6E-14 T 28-03-2018 IPR007842 HEPN domain CJD35_RS05255 3855e3a94dd50ecaafea99aedfaac8ee 278 Gene3D G3DSA:1.20.120.330 132 269 5.1E-29 T 28-03-2018 CJD35_RS05255 3855e3a94dd50ecaafea99aedfaac8ee 278 Gene3D G3DSA:3.30.460.10 2 126 1.6E-19 T 28-03-2018 CJD35_RS05255 3855e3a94dd50ecaafea99aedfaac8ee 278 SUPERFAMILY SSF81301 13 115 7.2E-12 T 28-03-2018 CJD35_RS05255 3855e3a94dd50ecaafea99aedfaac8ee 278 SUPERFAMILY SSF81593 142 261 2.0E-9 T 28-03-2018 CJD35_RS04295 8a2501510cdaec93dd5e1c240418c42c 235 Pfam PF01553 Acyltransferase 68 181 3.6E-17 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CJD35_RS04295 8a2501510cdaec93dd5e1c240418c42c 235 Gene3D G3DSA:3.40.1130.10 32 226 1.5E-27 T 28-03-2018 CJD35_RS04295 8a2501510cdaec93dd5e1c240418c42c 235 SUPERFAMILY SSF69593 20 227 4.32E-28 T 28-03-2018 CJD35_RS04295 8a2501510cdaec93dd5e1c240418c42c 235 SMART SM00563 70 184 1.6E-23 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CJD35_RS21085 36dd03f34dc8745eea42209d7f6bbd5c 244 PRINTS PR00046 Major sigma-70 factor signature 77 88 2.9E-5 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS21085 36dd03f34dc8745eea42209d7f6bbd5c 244 PRINTS PR00046 Major sigma-70 factor signature 41 53 2.9E-5 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS21085 36dd03f34dc8745eea42209d7f6bbd5c 244 PRINTS PR00046 Major sigma-70 factor signature 62 77 2.9E-5 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS21085 36dd03f34dc8745eea42209d7f6bbd5c 244 Gene3D G3DSA:1.10.10.10 32 97 3.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21085 36dd03f34dc8745eea42209d7f6bbd5c 244 Pfam PF04545 Sigma-70, region 4 38 89 2.5E-8 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS21085 36dd03f34dc8745eea42209d7f6bbd5c 244 SUPERFAMILY SSF88659 29 91 1.81E-11 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS01330 c481f421ce54d5a33a846e2c7dae7628 281 SUPERFAMILY SSF53474 2 278 7.69E-85 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS01330 c481f421ce54d5a33a846e2c7dae7628 281 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 277 8.6E-123 T 28-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 CJD35_RS01330 c481f421ce54d5a33a846e2c7dae7628 281 Gene3D G3DSA:3.40.50.1820 1 278 7.6E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS01330 c481f421ce54d5a33a846e2c7dae7628 281 Pfam PF00756 Putative esterase 21 271 8.5E-52 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 Pfam PF04324 BFD-like [2Fe-2S] binding domain 809 858 9.3E-14 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 Gene3D G3DSA:2.20.25.90 2 60 4.3E-16 T 28-03-2018 CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 SMART SM00926 2 56 1.6E-15 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 Gene3D G3DSA:3.40.50.740 251 534 4.1E-70 T 28-03-2018 CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 Pfam PF01568 Molydopterin dinucleotide binding domain 572 682 6.9E-29 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 4 54 6.4E-17 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 SUPERFAMILY SSF53706 4 573 1.03E-180 T 28-03-2018 CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 Pfam PF00384 Molybdopterin oxidoreductase 59 480 4.3E-77 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 SUPERFAMILY SSF50692 567 704 6.1E-42 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 Gene3D G3DSA:3.40.50.740 62 242 1.3E-47 T 28-03-2018 CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 Gene3D G3DSA:2.40.40.20 535 687 2.9E-39 T 28-03-2018 CJD35_RS17025 152e53ab1dcb7e38021f7719e9efa22d 869 PIRSF PIRSF036643 1 696 1.7E-149 T 28-03-2018 CJD35_RS01775 2f7d13209e391f2b62bc40b82b1c75bf 367 SMART SM00244 100 268 1.2E-23 T 28-03-2018 IPR001107 Band 7 domain CJD35_RS01775 2f7d13209e391f2b62bc40b82b1c75bf 367 SUPERFAMILY SSF117892 136 274 1.05E-19 T 28-03-2018 IPR001107 Band 7 domain CJD35_RS01775 2f7d13209e391f2b62bc40b82b1c75bf 367 Pfam PF01145 SPFH domain / Band 7 family 104 284 1.1E-29 T 28-03-2018 IPR001107 Band 7 domain CJD35_RS01775 2f7d13209e391f2b62bc40b82b1c75bf 367 Gene3D G3DSA:1.10.357.10 147 298 0.0027 T 28-03-2018 CJD35_RS01775 2f7d13209e391f2b62bc40b82b1c75bf 367 TIGRFAM TIGR01933 hflK: HflK protein 104 297 1.9E-51 T 28-03-2018 IPR010201 HflK GO:0016021 CJD35_RS16110 b39820c598db8f3fee18254acbd19923 736 Gene3D G3DSA:3.40.50.150 109 263 2.1E-14 T 28-03-2018 CJD35_RS16110 b39820c598db8f3fee18254acbd19923 736 Gene3D G3DSA:3.40.50.300 438 656 4.2E-11 T 28-03-2018 CJD35_RS16110 b39820c598db8f3fee18254acbd19923 736 SUPERFAMILY SSF52540 444 684 4.56E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS16110 b39820c598db8f3fee18254acbd19923 736 Pfam PF13872 P-loop containing NTP hydrolase pore-1 412 729 9.4E-111 T 28-03-2018 CJD35_RS16110 b39820c598db8f3fee18254acbd19923 736 SUPERFAMILY SSF53335 120 297 6.64E-16 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS08405 243e44169c5c5938bfd7217e3c556569 106 SUPERFAMILY SSF101386 4 92 2.24E-24 T 28-03-2018 CJD35_RS08405 243e44169c5c5938bfd7217e3c556569 106 Gene3D G3DSA:1.10.287.1080 1 93 8.9E-24 T 28-03-2018 CJD35_RS08405 243e44169c5c5938bfd7217e3c556569 106 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 7 88 2.9E-30 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CJD35_RS08405 243e44169c5c5938bfd7217e3c556569 106 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 91 1.4E-18 T 28-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CJD35_RS08405 243e44169c5c5938bfd7217e3c556569 106 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 88 19.952 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CJD35_RS20440 bb874bb58ff22640d7c83fa4665787db 398 Gene3D G3DSA:1.10.1660.10 35 99 2.0E-6 T 28-03-2018 CJD35_RS20440 bb874bb58ff22640d7c83fa4665787db 398 Pfam PF13614 AAA domain 102 282 5.6E-33 T 28-03-2018 IPR025669 AAA domain CJD35_RS20440 bb874bb58ff22640d7c83fa4665787db 398 SUPERFAMILY SSF52540 101 352 5.75E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20440 bb874bb58ff22640d7c83fa4665787db 398 Gene3D G3DSA:3.40.50.300 100 386 1.1E-44 T 28-03-2018 CJD35_RS20650 3a4bd3d953803ae32eda937f50e4e1d9 682 Gene3D G3DSA:2.170.130.10 22 164 5.1E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS20650 3a4bd3d953803ae32eda937f50e4e1d9 682 Pfam PF00593 TonB dependent receptor 187 644 2.4E-43 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS20650 3a4bd3d953803ae32eda937f50e4e1d9 682 Gene3D G3DSA:2.40.170.20 165 667 1.3E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS20650 3a4bd3d953803ae32eda937f50e4e1d9 682 SUPERFAMILY SSF56935 31 650 7.94E-81 T 28-03-2018 CJD35_RS20650 3a4bd3d953803ae32eda937f50e4e1d9 682 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 155 1.2E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 Gene3D G3DSA:3.40.220.10 3 151 5.6E-21 T 28-03-2018 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 326 333 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 SUPERFAMILY SSF52949 5 163 6.47E-14 T 28-03-2018 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 165 471 1.4E-120 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 SUPERFAMILY SSF53187 160 477 4.39E-116 T 28-03-2018 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 Gene3D G3DSA:3.40.630.10 152 481 5.7E-135 T 28-03-2018 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 480 33.684 T 28-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 30 130 5.7E-9 T 28-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 PRINTS PR00481 Cytosol aminopeptidase signature 322 342 1.1E-53 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 PRINTS PR00481 Cytosol aminopeptidase signature 300 321 1.1E-53 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 PRINTS PR00481 Cytosol aminopeptidase signature 263 284 1.1E-53 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 PRINTS PR00481 Cytosol aminopeptidase signature 351 366 1.1E-53 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJD35_RS09495 21e45c376c32747178961d312c9a4e1f 481 PRINTS PR00481 Cytosol aminopeptidase signature 241 258 1.1E-53 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CJD35_RS09175 3e67627abc644ae03d5e56e3c9ff1790 144 Pfam PF01814 Hemerythrin HHE cation binding domain 4 130 8.8E-11 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CJD35_RS09175 3e67627abc644ae03d5e56e3c9ff1790 144 Gene3D G3DSA:1.20.120.520 4 136 7.0E-16 T 28-03-2018 CJD35_RS07065 19a2be68f6d97c7c2b9e57fa7844ddd6 321 SUPERFAMILY SSF51905 4 184 1.21E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS07065 19a2be68f6d97c7c2b9e57fa7844ddd6 321 SUPERFAMILY SSF51905 276 313 1.21E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS07065 19a2be68f6d97c7c2b9e57fa7844ddd6 321 Pfam PF13450 NAD(P)-binding Rossmann-like domain 5 62 3.3E-16 T 28-03-2018 CJD35_RS07065 19a2be68f6d97c7c2b9e57fa7844ddd6 321 Gene3D G3DSA:3.50.50.60 2 52 5.4E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS07065 19a2be68f6d97c7c2b9e57fa7844ddd6 321 Gene3D G3DSA:3.90.660.10 53 271 2.6E-47 T 28-03-2018 CJD35_RS07065 19a2be68f6d97c7c2b9e57fa7844ddd6 321 PRINTS PR00419 Adrenodoxin reductase family signature 151 165 3.3E-7 T 28-03-2018 CJD35_RS07065 19a2be68f6d97c7c2b9e57fa7844ddd6 321 PRINTS PR00419 Adrenodoxin reductase family signature 25 38 3.3E-7 T 28-03-2018 CJD35_RS07065 19a2be68f6d97c7c2b9e57fa7844ddd6 321 PRINTS PR00419 Adrenodoxin reductase family signature 2 24 3.3E-7 T 28-03-2018 CJD35_RS07065 19a2be68f6d97c7c2b9e57fa7844ddd6 321 Pfam PF01593 Flavin containing amine oxidoreductase 87 271 3.5E-6 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CJD35_RS06135 19076822aeb70a8ede02ff10d690d8e7 321 SUPERFAMILY SSF50974 5 319 1.57E-86 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 CJD35_RS06135 19076822aeb70a8ede02ff10d690d8e7 321 Pfam PF10282 Lactonase, 7-bladed beta-propeller 17 86 9.6E-8 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller CJD35_RS06135 19076822aeb70a8ede02ff10d690d8e7 321 Gene3D G3DSA:2.130.10.10 83 149 9.7E-20 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS06135 19076822aeb70a8ede02ff10d690d8e7 321 Gene3D G3DSA:2.120.10.30 9 82 4.5E-13 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS06135 19076822aeb70a8ede02ff10d690d8e7 321 Gene3D G3DSA:2.130.10.10 260 321 1.1E-12 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS06135 19076822aeb70a8ede02ff10d690d8e7 321 Gene3D G3DSA:2.130.10.10 150 259 2.8E-26 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS06135 19076822aeb70a8ede02ff10d690d8e7 321 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 21 60 8.6E-11 T 28-03-2018 IPR011964 YVTN beta-propeller repeat CJD35_RS06135 19076822aeb70a8ede02ff10d690d8e7 321 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 280 318 5.7E-13 T 28-03-2018 IPR011964 YVTN beta-propeller repeat CJD35_RS06135 19076822aeb70a8ede02ff10d690d8e7 321 TIGRFAM TIGR03866 PQQ_ABC_repeats: PQQ-dependent catabolism-associated beta-propeller protein 17 321 1.6E-120 T 28-03-2018 IPR022456 PQQ-dependent catabolism-associated beta-propeller protein CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 SUPERFAMILY SSF51246 336 456 3.19E-37 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 Gene3D G3DSA:3.40.50.20 2 124 1.2E-53 T 28-03-2018 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 Pfam PF00364 Biotin-requiring enzyme 602 664 3.7E-17 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 622 639 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 SMART SM00878 341 453 2.4E-52 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 Gene3D G3DSA:3.30.470.20 211 456 1.5E-101 T 28-03-2018 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 5.1E-43 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 Gene3D G3DSA:3.30.1490.20 125 210 9.3E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 SUPERFAMILY SSF51230 587 665 5.23E-19 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 SUPERFAMILY SSF56059 84 353 3.89E-67 T 28-03-2018 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 327 1.1E-77 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 Gene3D G3DSA:2.40.50.100 599 666 8.5E-16 T 28-03-2018 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 Pfam PF02785 Biotin carboxylase C-terminal domain 341 453 3.3E-34 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 SUPERFAMILY SSF52440 2 114 6.83E-47 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CJD35_RS12975 3caa4f174ea65dd0b1ab1dc4af439753 666 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS04620 1b292c00b3e8f44ca10c56780845ce39 312 Pfam PF13763 Domain of unknown function (DUF4167) 12 87 2.1E-28 T 28-03-2018 IPR025430 Domain of unknown function DUF4167 CJD35_RS01030 2dfc033fc4b2eaa94873de290b883d0f 332 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 327 2.1E-28 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CJD35_RS01030 2dfc033fc4b2eaa94873de290b883d0f 332 SUPERFAMILY SSF51735 109 297 2.08E-61 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS01030 2dfc033fc4b2eaa94873de290b883d0f 332 SUPERFAMILY SSF52283 9 143 4.35E-37 T 28-03-2018 CJD35_RS01030 2dfc033fc4b2eaa94873de290b883d0f 332 Gene3D G3DSA:3.40.50.720 122 299 6.5E-58 T 28-03-2018 CJD35_RS01030 2dfc033fc4b2eaa94873de290b883d0f 332 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 207 229 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJD35_RS01030 2dfc033fc4b2eaa94873de290b883d0f 332 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 117 296 1.1E-59 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CJD35_RS01030 2dfc033fc4b2eaa94873de290b883d0f 332 Gene3D G3DSA:3.40.50.720 8 121 2.1E-31 T 28-03-2018 CJD35_RS01335 5ae102739856018f6d9930cc2616dea0 127 SUPERFAMILY SSF54593 2 122 6.05E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS01335 5ae102739856018f6d9930cc2616dea0 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 116 7.5E-6 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS01335 5ae102739856018f6d9930cc2616dea0 127 Gene3D G3DSA:3.10.180.10 1 127 3.3E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS20710 f0ca3f5deb7670a3e4566c7b079cab6b 61 Pfam PF04325 Protein of unknown function (DUF465) 7 51 4.7E-13 T 28-03-2018 IPR007420 Protein of unknown function DUF465 CJD35_RS18485 f0ca3f5deb7670a3e4566c7b079cab6b 61 Pfam PF04325 Protein of unknown function (DUF465) 7 51 4.7E-13 T 28-03-2018 IPR007420 Protein of unknown function DUF465 CJD35_RS08120 949c79df78a35e0e755a7c5dd904467d 356 SUPERFAMILY SSF55729 170 337 1.7E-11 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS08120 949c79df78a35e0e755a7c5dd904467d 356 Pfam PF13480 Acetyltransferase (GNAT) domain 178 319 4.7E-18 T 28-03-2018 CJD35_RS08120 949c79df78a35e0e755a7c5dd904467d 356 Gene3D G3DSA:3.40.630.30 142 343 2.0E-14 T 28-03-2018 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 494 598 1.5E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 SUPERFAMILY SSF55785 213 258 2.47E-6 T 28-03-2018 IPR000014 PAS domain CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 Gene3D G3DSA:3.30.565.10 413 599 1.9E-41 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 SMART SM00388 384 449 1.1E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 SMART SM00387 493 600 1.0E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 SUPERFAMILY SSF55785 76 203 1.73E-8 T 28-03-2018 IPR000014 PAS domain CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 547 557 4.2E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 578 4.2E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 597 4.2E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 543 4.2E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 SUPERFAMILY SSF55874 439 598 2.23E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 SMART SM00448 621 734 1.6E-11 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 Gene3D G3DSA:3.40.50.2300 610 739 3.4E-17 T 28-03-2018 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 Pfam PF00512 His Kinase A (phospho-acceptor) domain 384 449 1.1E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 Gene3D G3DSA:3.30.450.20 98 209 7.5E-11 T 28-03-2018 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 Gene3D G3DSA:1.10.287.620 2 97 0.012 T 28-03-2018 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 SUPERFAMILY SSF52172 618 739 2.42E-19 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 SUPERFAMILY SSF47384 370 449 3.34E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 Gene3D G3DSA:3.30.450.20 360 412 3.3E-7 T 28-03-2018 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 Gene3D G3DSA:3.30.450.20 218 359 4.0E-12 T 28-03-2018 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 Pfam PF00072 Response regulator receiver domain 623 734 7.4E-10 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 Pfam PF12860 PAS fold 228 336 1.1E-13 T 28-03-2018 CJD35_RS06160 a5aa7431de61e9e6d5f480405a7a096f 739 Pfam PF12860 PAS fold 95 208 3.0E-16 T 28-03-2018 CJD35_RS02350 25c29965cc77257fb96cb1babb7177ad 897 Pfam PF10150 Ribonuclease E/G family 209 479 3.3E-93 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CJD35_RS02350 25c29965cc77257fb96cb1babb7177ad 897 SUPERFAMILY SSF50249 169 213 1.72E-16 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS02350 25c29965cc77257fb96cb1babb7177ad 897 SUPERFAMILY SSF50249 36 77 1.72E-16 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS02350 25c29965cc77257fb96cb1babb7177ad 897 Gene3D G3DSA:2.40.50.140 29 212 2.2E-36 T 28-03-2018 CJD35_RS02350 25c29965cc77257fb96cb1babb7177ad 897 SMART SM00316 34 207 8.2E-4 T 28-03-2018 IPR022967 RNA-binding domain, S1 CJD35_RS02350 25c29965cc77257fb96cb1babb7177ad 897 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 10 507 4.4E-158 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CJD35_RS02350 25c29965cc77257fb96cb1babb7177ad 897 Hamap MF_00970 Ribonuclease E [rne]. 1 894 30.255 T 28-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CJD35_RS02350 25c29965cc77257fb96cb1babb7177ad 897 Pfam PF00575 S1 RNA binding domain 35 77 5.3E-5 T 28-03-2018 IPR003029 S1 domain GO:0003676 CJD35_RS12410 231c22f09a4639bafeebcc70c72f434b 618 Gene3D G3DSA:2.140.10.10 36 617 1.3E-104 T 28-03-2018 CJD35_RS12410 231c22f09a4639bafeebcc70c72f434b 618 SUPERFAMILY SSF50998 46 611 1.7E-132 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CJD35_RS12410 231c22f09a4639bafeebcc70c72f434b 618 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 35 588 1.2E-215 T 28-03-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 CJD35_RS12410 231c22f09a4639bafeebcc70c72f434b 618 SMART SM00564 454 519 25.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS12410 231c22f09a4639bafeebcc70c72f434b 618 SMART SM00564 528 560 3.9E-6 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS12410 231c22f09a4639bafeebcc70c72f434b 618 SMART SM00564 147 178 2.0E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS12410 231c22f09a4639bafeebcc70c72f434b 618 SMART SM00564 97 129 4.0E-7 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS12410 231c22f09a4639bafeebcc70c72f434b 618 SMART SM00564 197 235 160.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS12410 231c22f09a4639bafeebcc70c72f434b 618 Pfam PF01011 PQQ enzyme repeat 534 570 5.8E-10 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS12410 231c22f09a4639bafeebcc70c72f434b 618 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 280 301 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CJD35_RS12410 231c22f09a4639bafeebcc70c72f434b 618 Pfam PF13360 PQQ-like domain 94 286 1.9E-16 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS11755 6aa3131d64b6e994feed105be1f8693e 449 Pfam PF02397 Bacterial sugar transferase 256 444 7.2E-65 T 28-03-2018 IPR003362 Bacterial sugar transferase CJD35_RS11755 6aa3131d64b6e994feed105be1f8693e 449 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 19 447 1.5E-98 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CJD35_RS21190 6054e2c470a12fd13c5743fcb2bd5669 266 Pfam PF12697 Alpha/beta hydrolase family 4 242 9.2E-18 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS21190 6054e2c470a12fd13c5743fcb2bd5669 266 Gene3D G3DSA:3.40.50.1820 2 252 4.5E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS21190 6054e2c470a12fd13c5743fcb2bd5669 266 SUPERFAMILY SSF53474 4 252 7.42E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS18070 6054e2c470a12fd13c5743fcb2bd5669 266 Pfam PF12697 Alpha/beta hydrolase family 4 242 9.2E-18 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS18070 6054e2c470a12fd13c5743fcb2bd5669 266 Gene3D G3DSA:3.40.50.1820 2 252 4.5E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS18070 6054e2c470a12fd13c5743fcb2bd5669 266 SUPERFAMILY SSF53474 4 252 7.42E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS00095 8e0a7b5b0c218f0f9061a02cf814b247 656 Pfam PF01103 Surface antigen 365 656 5.6E-42 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CJD35_RS00095 8e0a7b5b0c218f0f9061a02cf814b247 656 Gene3D G3DSA:2.40.160.50 292 656 1.5E-63 T 28-03-2018 CJD35_RS00095 8e0a7b5b0c218f0f9061a02cf814b247 656 Gene3D G3DSA:3.10.20.310 86 176 0.0011 T 28-03-2018 CJD35_RS00095 8e0a7b5b0c218f0f9061a02cf814b247 656 Gene3D G3DSA:3.10.20.310 177 258 4.1E-8 T 28-03-2018 CJD35_RS17445 bc7c3986b86662a950f5281e69b9b68f 306 Pfam PF02625 XdhC and CoxI family 14 66 1.4E-15 T 28-03-2018 IPR003777 XdhC- CoxI CJD35_RS17445 bc7c3986b86662a950f5281e69b9b68f 306 Gene3D G3DSA:3.40.50.720 159 299 0.0014 T 28-03-2018 CJD35_RS17445 bc7c3986b86662a950f5281e69b9b68f 306 Pfam PF13478 XdhC Rossmann domain 161 300 3.7E-34 T 28-03-2018 IPR027051 XdhC Rossmann domain CJD35_RS17445 bc7c3986b86662a950f5281e69b9b68f 306 TIGRFAM TIGR02964 xanthine_xdhC: xanthine dehydrogenase accessory protein XdhC 19 301 5.0E-79 T 28-03-2018 IPR014308 Xanthine dehydrogenase accessory protein XdhC CJD35_RS18925 e65e596322109737741b75cc1df0e443 1010 SUPERFAMILY SSF52540 387 394 4.4E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18925 e65e596322109737741b75cc1df0e443 1010 SUPERFAMILY SSF52540 453 607 4.4E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18925 e65e596322109737741b75cc1df0e443 1010 Pfam PF13604 AAA domain 457 650 4.1E-41 T 28-03-2018 CJD35_RS18925 e65e596322109737741b75cc1df0e443 1010 SUPERFAMILY SSF55464 1 294 2.2E-81 T 28-03-2018 CJD35_RS18925 e65e596322109737741b75cc1df0e443 1010 Gene3D G3DSA:3.40.50.300 633 927 1.7E-4 T 28-03-2018 CJD35_RS18925 e65e596322109737741b75cc1df0e443 1010 Gene3D G3DSA:3.40.50.300 360 632 5.8E-14 T 28-03-2018 CJD35_RS18925 e65e596322109737741b75cc1df0e443 1010 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 283 4.2E-87 T 28-03-2018 IPR014059 Conjugative relaxase, N-terminal CJD35_RS18925 e65e596322109737741b75cc1df0e443 1010 SUPERFAMILY SSF52540 792 911 3.19E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18925 e65e596322109737741b75cc1df0e443 1010 SUPERFAMILY SSF52540 586 640 3.19E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18925 e65e596322109737741b75cc1df0e443 1010 SUPERFAMILY SSF52540 673 705 3.19E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18925 e65e596322109737741b75cc1df0e443 1010 Pfam PF08751 TrwC relaxase 11 279 2.0E-76 T 28-03-2018 IPR014862 TrwC relaxase CJD35_RS11335 b184a2bdf723a8ca93a96b6bcc9f4aad 248 Pfam PF13632 Glycosyl transferase family group 2 1 150 5.1E-23 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS11335 b184a2bdf723a8ca93a96b6bcc9f4aad 248 Gene3D G3DSA:3.90.550.10 4 125 3.0E-4 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS11980 2fc0cd474fc189d9a5789f727ffe87ea 270 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 17 225 1.4E-47 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS11980 2fc0cd474fc189d9a5789f727ffe87ea 270 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 16 248 1.3E-83 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CJD35_RS11980 2fc0cd474fc189d9a5789f727ffe87ea 270 SUPERFAMILY SSF53790 13 255 6.54E-70 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS11980 2fc0cd474fc189d9a5789f727ffe87ea 270 Gene3D G3DSA:3.30.950.10 141 262 1.0E-28 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS11980 2fc0cd474fc189d9a5789f727ffe87ea 270 Gene3D G3DSA:3.40.1010.10 15 140 7.0E-35 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS11980 2fc0cd474fc189d9a5789f727ffe87ea 270 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 20 34 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CJD35_RS21745 ae657f8538fecb7aa2803c8ea9873be3 113 Pfam PF02049 Flagellar hook-basal body complex protein FliE 31 112 6.3E-24 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS21745 ae657f8538fecb7aa2803c8ea9873be3 113 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 4 112 15.322 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS21745 ae657f8538fecb7aa2803c8ea9873be3 113 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 39 111 6.7E-16 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS21745 ae657f8538fecb7aa2803c8ea9873be3 113 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 42 58 1.2E-9 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS21745 ae657f8538fecb7aa2803c8ea9873be3 113 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 76 92 1.2E-9 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS21745 ae657f8538fecb7aa2803c8ea9873be3 113 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 97 110 1.2E-9 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS16850 484de4ae986a67d812a2d5646017628a 435 Gene3D G3DSA:1.20.1250.20 240 435 4.0E-21 T 28-03-2018 CJD35_RS16850 484de4ae986a67d812a2d5646017628a 435 Gene3D G3DSA:1.20.1250.20 14 213 1.8E-34 T 28-03-2018 CJD35_RS16850 484de4ae986a67d812a2d5646017628a 435 SUPERFAMILY SSF103473 8 434 7.46E-69 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS16850 484de4ae986a67d812a2d5646017628a 435 Pfam PF07690 Major Facilitator Superfamily 260 433 2.7E-11 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS16850 484de4ae986a67d812a2d5646017628a 435 Pfam PF07690 Major Facilitator Superfamily 30 200 7.9E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS17820 2200b74c1cef576c06b51b474f9fbaf4 181 Gene3D G3DSA:2.60.30.10 61 180 2.3E-55 T 28-03-2018 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 CJD35_RS17820 2200b74c1cef576c06b51b474f9fbaf4 181 Pfam PF02975 Methylamine dehydrogenase, L chain 68 178 2.5E-53 T 28-03-2018 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 CJD35_RS17820 2200b74c1cef576c06b51b474f9fbaf4 181 SUPERFAMILY SSF57561 65 180 8.76E-51 T 28-03-2018 IPR013504 Methylamine/Aralkylamine dehydrogenase light chain, C-terminal domain GO:0009308|GO:0016638|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 CJD35_RS17820 2200b74c1cef576c06b51b474f9fbaf4 181 PIRSF PIRSF000192 1 181 8.1E-61 T 28-03-2018 IPR016008 Amine dehydrogenase light chain GO:0009308|GO:0030058|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 CJD35_RS09145 9096acdeb7dab7c89b4ab99e68cb0362 360 Gene3D G3DSA:3.40.50.2300 9 157 6.4E-25 T 28-03-2018 CJD35_RS09145 9096acdeb7dab7c89b4ab99e68cb0362 360 Gene3D G3DSA:3.40.50.180 161 357 1.5E-58 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJD35_RS09145 9096acdeb7dab7c89b4ab99e68cb0362 360 SUPERFAMILY SSF52738 168 354 7.59E-53 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJD35_RS09145 9096acdeb7dab7c89b4ab99e68cb0362 360 Pfam PF00072 Response regulator receiver domain 21 124 1.8E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS09145 9096acdeb7dab7c89b4ab99e68cb0362 360 PIRSF PIRSF000876 15 358 5.6E-88 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJD35_RS09145 9096acdeb7dab7c89b4ab99e68cb0362 360 SUPERFAMILY SSF52172 19 145 1.85E-23 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS09145 9096acdeb7dab7c89b4ab99e68cb0362 360 Pfam PF01339 CheB methylesterase 173 350 3.2E-49 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJD35_RS09145 9096acdeb7dab7c89b4ab99e68cb0362 360 SMART SM00448 18 140 2.7E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS20700 6967575236e894ba4fec5f8c42feff43 184 Gene3D G3DSA:1.20.1260.10 36 184 2.6E-26 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS20700 6967575236e894ba4fec5f8c42feff43 184 Pfam PF13628 Domain of unknown function (DUF4142) 49 184 2.0E-38 T 28-03-2018 IPR025419 Domain of unknown function DUF4142 CJD35_RS18475 6967575236e894ba4fec5f8c42feff43 184 Gene3D G3DSA:1.20.1260.10 36 184 2.6E-26 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS18475 6967575236e894ba4fec5f8c42feff43 184 Pfam PF13628 Domain of unknown function (DUF4142) 49 184 2.0E-38 T 28-03-2018 IPR025419 Domain of unknown function DUF4142 CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 SUPERFAMILY SSF51230 1 95 7.33E-28 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 Pfam PF02817 e3 binding domain 121 153 6.7E-14 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 Gene3D G3DSA:3.30.559.10 176 414 1.3E-92 T 28-03-2018 CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 SUPERFAMILY SSF47005 115 158 4.97E-12 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 186 413 1.1E-79 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 Pfam PF00364 Biotin-requiring enzyme 4 76 5.8E-20 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 SUPERFAMILY SSF52777 188 415 5.34E-87 T 28-03-2018 CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 Gene3D G3DSA:4.10.320.10 113 175 7.8E-19 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 415 1.2E-173 T 28-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 Gene3D G3DSA:3.90.1170.30 1 45 4.8E-13 T 28-03-2018 CJD35_RS01595 4af8942bd417f5bd600196070b1e75ea 416 Gene3D G3DSA:3.90.1170.30 46 112 3.2E-10 T 28-03-2018 CJD35_RS18095 3c15742b025dde4226ce6a0ff64dd3ea 127 SUPERFAMILY SSF46458 8 119 4.8E-26 T 28-03-2018 IPR009050 Globin-like CJD35_RS18095 3c15742b025dde4226ce6a0ff64dd3ea 127 Gene3D G3DSA:1.10.490.10 3 124 2.0E-22 T 28-03-2018 CJD35_RS21215 3c15742b025dde4226ce6a0ff64dd3ea 127 SUPERFAMILY SSF46458 8 119 4.8E-26 T 28-03-2018 IPR009050 Globin-like CJD35_RS21215 3c15742b025dde4226ce6a0ff64dd3ea 127 Gene3D G3DSA:1.10.490.10 3 124 2.0E-22 T 28-03-2018 CJD35_RS05140 761fa7a10215e4ef15219bb87d36a166 670 Gene3D G3DSA:1.10.287.950 500 593 5.5E-4 T 28-03-2018 CJD35_RS05140 761fa7a10215e4ef15219bb87d36a166 670 Gene3D G3DSA:1.10.287.1060 428 499 0.035 T 28-03-2018 CJD35_RS05140 761fa7a10215e4ef15219bb87d36a166 670 Gene3D G3DSA:1.10.287.1060 234 345 0.079 T 28-03-2018 CJD35_RS05140 761fa7a10215e4ef15219bb87d36a166 670 Gene3D G3DSA:1.10.287.850 594 670 0.0099 T 28-03-2018 CJD35_RS05140 761fa7a10215e4ef15219bb87d36a166 670 Gene3D G3DSA:1.10.287.1060 346 427 1.4E-5 T 28-03-2018 CJD35_RS18355 30bbac689ff69d3622bd7e3b318b99fb 333 Gene3D G3DSA:3.30.420.40 6 161 1.1E-24 T 28-03-2018 CJD35_RS18355 30bbac689ff69d3622bd7e3b318b99fb 333 Gene3D G3DSA:3.30.420.40 162 251 1.9E-19 T 28-03-2018 CJD35_RS18355 30bbac689ff69d3622bd7e3b318b99fb 333 Gene3D G3DSA:3.30.420.40 253 319 6.8E-6 T 28-03-2018 CJD35_RS18355 30bbac689ff69d3622bd7e3b318b99fb 333 SUPERFAMILY SSF53067 11 148 1.3E-25 T 28-03-2018 CJD35_RS18355 30bbac689ff69d3622bd7e3b318b99fb 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 132 151 7.0E-29 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS18355 30bbac689ff69d3622bd7e3b318b99fb 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 49 67 7.0E-29 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS18355 30bbac689ff69d3622bd7e3b318b99fb 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 69 92 7.0E-29 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS18355 30bbac689ff69d3622bd7e3b318b99fb 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 187 207 7.0E-29 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS18355 30bbac689ff69d3622bd7e3b318b99fb 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 302 328 7.0E-29 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS18355 30bbac689ff69d3622bd7e3b318b99fb 333 Pfam PF06723 MreB/Mbl protein 11 332 6.3E-95 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS18355 30bbac689ff69d3622bd7e3b318b99fb 333 SUPERFAMILY SSF53067 151 329 1.61E-35 T 28-03-2018 CJD35_RS21475 30bbac689ff69d3622bd7e3b318b99fb 333 Gene3D G3DSA:3.30.420.40 6 161 1.1E-24 T 28-03-2018 CJD35_RS21475 30bbac689ff69d3622bd7e3b318b99fb 333 Gene3D G3DSA:3.30.420.40 162 251 1.9E-19 T 28-03-2018 CJD35_RS21475 30bbac689ff69d3622bd7e3b318b99fb 333 Gene3D G3DSA:3.30.420.40 253 319 6.8E-6 T 28-03-2018 CJD35_RS21475 30bbac689ff69d3622bd7e3b318b99fb 333 SUPERFAMILY SSF53067 11 148 1.3E-25 T 28-03-2018 CJD35_RS21475 30bbac689ff69d3622bd7e3b318b99fb 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 132 151 7.0E-29 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS21475 30bbac689ff69d3622bd7e3b318b99fb 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 49 67 7.0E-29 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS21475 30bbac689ff69d3622bd7e3b318b99fb 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 69 92 7.0E-29 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS21475 30bbac689ff69d3622bd7e3b318b99fb 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 187 207 7.0E-29 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS21475 30bbac689ff69d3622bd7e3b318b99fb 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 302 328 7.0E-29 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS21475 30bbac689ff69d3622bd7e3b318b99fb 333 Pfam PF06723 MreB/Mbl protein 11 332 6.3E-95 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS21475 30bbac689ff69d3622bd7e3b318b99fb 333 SUPERFAMILY SSF53067 151 329 1.61E-35 T 28-03-2018 CJD35_RS05990 4597d9978acc31cbe9ea647329e8d670 821 Gene3D G3DSA:3.40.50.300 244 408 5.1E-27 T 28-03-2018 CJD35_RS05990 4597d9978acc31cbe9ea647329e8d670 821 SUPERFAMILY SSF52540 49 375 1.22E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05990 4597d9978acc31cbe9ea647329e8d670 821 TIGRFAM TIGR04121 DEXH_lig_assoc: DEXH box helicase, DNA ligase-associated 27 813 0.0 T 28-03-2018 IPR026362 DEXH box helicase, DNA ligase-associated CJD35_RS05990 4597d9978acc31cbe9ea647329e8d670 821 SMART SM00490 282 367 1.2E-15 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS05990 4597d9978acc31cbe9ea647329e8d670 821 Pfam PF08494 DEAD/H associated 604 785 3.2E-41 T 28-03-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 CJD35_RS05990 4597d9978acc31cbe9ea647329e8d670 821 SMART SM00487 34 241 6.1E-29 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS05990 4597d9978acc31cbe9ea647329e8d670 821 Pfam PF00271 Helicase conserved C-terminal domain 266 362 2.1E-15 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS05990 4597d9978acc31cbe9ea647329e8d670 821 PIRSF PIRSF037307 12 819 1.6E-175 T 28-03-2018 IPR017170 Lhr-like ATP-dependent RNA helicase, predicted GO:0005524|GO:0016818 CJD35_RS05990 4597d9978acc31cbe9ea647329e8d670 821 Gene3D G3DSA:3.40.50.300 15 221 1.2E-32 T 28-03-2018 CJD35_RS05990 4597d9978acc31cbe9ea647329e8d670 821 Pfam PF00270 DEAD/DEAH box helicase 41 208 1.4E-23 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJD35_RS09825 720a2a68bddfca5e6fdd0a983cee4ad2 233 Gene3D G3DSA:3.40.50.2300 1 126 5.7E-35 T 28-03-2018 CJD35_RS09825 720a2a68bddfca5e6fdd0a983cee4ad2 233 SMART SM00862 151 227 1.8E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS09825 720a2a68bddfca5e6fdd0a983cee4ad2 233 SUPERFAMILY SSF46894 128 228 2.07E-29 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS09825 720a2a68bddfca5e6fdd0a983cee4ad2 233 SMART SM00448 4 117 1.1E-43 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS09825 720a2a68bddfca5e6fdd0a983cee4ad2 233 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 4 228 3.1E-100 T 28-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CJD35_RS09825 720a2a68bddfca5e6fdd0a983cee4ad2 233 SUPERFAMILY SSF52172 3 127 9.96E-42 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS09825 720a2a68bddfca5e6fdd0a983cee4ad2 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 1.6E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS09825 720a2a68bddfca5e6fdd0a983cee4ad2 233 Pfam PF00072 Response regulator receiver domain 7 117 2.7E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS09825 720a2a68bddfca5e6fdd0a983cee4ad2 233 Gene3D G3DSA:1.10.10.10 127 233 9.5E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19480 b90fb3ad074d62db776f3270d2963b07 365 SUPERFAMILY SSF50022 11 85 1.31E-21 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS19480 b90fb3ad074d62db776f3270d2963b07 365 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 92 363 1.2E-12 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CJD35_RS19480 b90fb3ad074d62db776f3270d2963b07 365 Gene3D G3DSA:2.20.25.10 11 58 3.2E-12 T 28-03-2018 CJD35_RS19480 b90fb3ad074d62db776f3270d2963b07 365 SUPERFAMILY SSF55961 87 364 1.49E-41 T 28-03-2018 CJD35_RS19480 b90fb3ad074d62db776f3270d2963b07 365 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 5 25 1.6E-20 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS19480 b90fb3ad074d62db776f3270d2963b07 365 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 111 133 1.6E-20 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS19480 b90fb3ad074d62db776f3270d2963b07 365 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 70 96 1.6E-20 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS19480 b90fb3ad074d62db776f3270d2963b07 365 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 26 46 1.6E-20 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS19480 b90fb3ad074d62db776f3270d2963b07 365 Gene3D G3DSA:3.90.380.10 59 365 1.6E-54 T 28-03-2018 CJD35_RS19480 b90fb3ad074d62db776f3270d2963b07 365 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 12 35 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CJD35_RS19480 b90fb3ad074d62db776f3270d2963b07 365 Pfam PF00355 Rieske [2Fe-2S] domain 11 52 9.7E-10 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS20610 fe07900ec555991993b1f344fa19e95c 319 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 84 8.9E-6 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS20610 fe07900ec555991993b1f344fa19e95c 319 Gene3D G3DSA:3.40.50.720 133 303 2.4E-34 T 28-03-2018 CJD35_RS20610 fe07900ec555991993b1f344fa19e95c 319 Pfam PF00107 Zinc-binding dehydrogenase 149 271 1.2E-27 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS20610 fe07900ec555991993b1f344fa19e95c 319 SUPERFAMILY SSF51735 114 268 1.03E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS20610 fe07900ec555991993b1f344fa19e95c 319 SUPERFAMILY SSF50129 1 142 1.13E-30 T 28-03-2018 IPR011032 GroES-like CJD35_RS20610 fe07900ec555991993b1f344fa19e95c 319 SMART SM00829 10 317 2.7E-24 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS20610 fe07900ec555991993b1f344fa19e95c 319 Gene3D G3DSA:3.90.180.10 1 132 3.1E-34 T 28-03-2018 CJD35_RS21285 284af15112ce208fad065e6bf228451c 292 SUPERFAMILY SSF46785 2 110 2.72E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21285 284af15112ce208fad065e6bf228451c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS21285 284af15112ce208fad065e6bf228451c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS21285 284af15112ce208fad065e6bf228451c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS21285 284af15112ce208fad065e6bf228451c 292 Gene3D G3DSA:3.40.190.10 177 260 1.4E-9 T 28-03-2018 CJD35_RS21285 284af15112ce208fad065e6bf228451c 292 Gene3D G3DSA:3.40.190.10 90 176 1.5E-9 T 28-03-2018 CJD35_RS21285 284af15112ce208fad065e6bf228451c 292 Pfam PF03466 LysR substrate binding domain 88 290 7.4E-25 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS21285 284af15112ce208fad065e6bf228451c 292 SUPERFAMILY SSF53850 89 291 1.63E-27 T 28-03-2018 CJD35_RS21285 284af15112ce208fad065e6bf228451c 292 Gene3D G3DSA:1.10.10.10 1 89 1.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21285 284af15112ce208fad065e6bf228451c 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 59 6.0E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS18165 284af15112ce208fad065e6bf228451c 292 SUPERFAMILY SSF46785 2 110 2.72E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS18165 284af15112ce208fad065e6bf228451c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS18165 284af15112ce208fad065e6bf228451c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS18165 284af15112ce208fad065e6bf228451c 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS18165 284af15112ce208fad065e6bf228451c 292 Gene3D G3DSA:3.40.190.10 177 260 1.4E-9 T 28-03-2018 CJD35_RS18165 284af15112ce208fad065e6bf228451c 292 Gene3D G3DSA:3.40.190.10 90 176 1.5E-9 T 28-03-2018 CJD35_RS18165 284af15112ce208fad065e6bf228451c 292 Pfam PF03466 LysR substrate binding domain 88 290 7.4E-25 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS18165 284af15112ce208fad065e6bf228451c 292 SUPERFAMILY SSF53850 89 291 1.63E-27 T 28-03-2018 CJD35_RS18165 284af15112ce208fad065e6bf228451c 292 Gene3D G3DSA:1.10.10.10 1 89 1.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS18165 284af15112ce208fad065e6bf228451c 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 59 6.0E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS00290 7101e98d9af49e8c492e93a3fdb634b2 359 Gene3D G3DSA:3.30.1330.60 237 356 1.4E-27 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS00290 7101e98d9af49e8c492e93a3fdb634b2 359 Gene3D G3DSA:2.40.160.20 7 236 1.2E-37 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS00290 7101e98d9af49e8c492e93a3fdb634b2 359 SUPERFAMILY SSF56925 23 212 2.04E-29 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS00290 7101e98d9af49e8c492e93a3fdb634b2 359 PRINTS PR01021 OMPA domain signature 283 298 1.2E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJD35_RS00290 7101e98d9af49e8c492e93a3fdb634b2 359 PRINTS PR01021 OMPA domain signature 253 275 1.2E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJD35_RS00290 7101e98d9af49e8c492e93a3fdb634b2 359 PRINTS PR01021 OMPA domain signature 298 314 1.2E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJD35_RS00290 7101e98d9af49e8c492e93a3fdb634b2 359 Pfam PF00691 OmpA family 252 347 3.2E-17 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS00290 7101e98d9af49e8c492e93a3fdb634b2 359 SUPERFAMILY SSF103088 224 352 2.49E-30 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS00290 7101e98d9af49e8c492e93a3fdb634b2 359 Pfam PF13505 Outer membrane protein beta-barrel domain 7 212 4.1E-16 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel CJD35_RS16030 c1d3dcd904ad06986abae910836d4f85 152 Pfam PF05284 Protein of unknown function (DUF736) 2 103 2.9E-20 T 28-03-2018 IPR007948 Protein of unknown function DUF736 CJD35_RS03255 84a84ee13389579652194ec3f7f7e874 445 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 444 9.3E-64 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CJD35_RS03255 84a84ee13389579652194ec3f7f7e874 445 SUPERFAMILY SSF64518 172 445 1.15E-13 T 28-03-2018 CJD35_RS03255 84a84ee13389579652194ec3f7f7e874 445 Pfam PF00460 Flagella basal body rod protein 7 34 4.8E-5 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJD35_RS03255 84a84ee13389579652194ec3f7f7e874 445 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 374 444 1.2E-8 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJD35_RS22100 305148228c8be06f522cd2d2e22529e3 79 Gene3D G3DSA:3.40.50.1000 1 77 3.1E-13 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS22100 305148228c8be06f522cd2d2e22529e3 79 Pfam PF13242 HAD-hyrolase-like 22 67 3.5E-5 T 28-03-2018 CJD35_RS22100 305148228c8be06f522cd2d2e22529e3 79 SUPERFAMILY SSF56784 4 72 4.7E-13 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS22100 305148228c8be06f522cd2d2e22529e3 79 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 12 61 1.2E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 55 102 1.5E-5 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 347 586 2.2E-27 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 616 705 1.5E-9 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 Gene3D G3DSA:3.30.365.10 615 753 5.3E-23 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 Gene3D G3DSA:3.90.1170.50 228 360 2.8E-18 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 Gene3D G3DSA:3.30.365.10 361 452 4.1E-23 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 PIRSF PIRSF036389 6 755 1.5E-166 T 28-03-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 Gene3D G3DSA:3.30.365.10 453 614 5.2E-33 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 SUPERFAMILY SSF56003 145 268 5.93E-30 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 SUPERFAMILY SSF56003 17 111 5.93E-30 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 SUPERFAMILY SSF54665 245 314 3.17E-5 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 Gene3D G3DSA:3.30.365.10 32 226 1.1E-29 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 SMART SM01008 244 322 2.6E-4 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS01760 9f50209e5bb250d75c0aa5c266b6db57 755 SUPERFAMILY SSF56003 344 751 1.22E-83 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS06895 9887a0296fe350ea1c8d9da4d89dcd2e 392 Gene3D G3DSA:2.40.110.10 124 220 4.7E-30 T 28-03-2018 CJD35_RS06895 9887a0296fe350ea1c8d9da4d89dcd2e 392 SUPERFAMILY SSF56645 2 246 3.53E-69 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS06895 9887a0296fe350ea1c8d9da4d89dcd2e 392 Gene3D G3DSA:1.10.540.10 1 123 1.0E-25 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS06895 9887a0296fe350ea1c8d9da4d89dcd2e 392 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 274 389 4.4E-12 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS06895 9887a0296fe350ea1c8d9da4d89dcd2e 392 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 128 218 8.6E-17 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS06895 9887a0296fe350ea1c8d9da4d89dcd2e 392 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 123 3.2E-19 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS06895 9887a0296fe350ea1c8d9da4d89dcd2e 392 SUPERFAMILY SSF47203 233 392 6.73E-14 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS06895 9887a0296fe350ea1c8d9da4d89dcd2e 392 Gene3D G3DSA:1.20.140.10 221 392 1.9E-24 T 28-03-2018 CJD35_RS14710 d8629b326ae0bf0207aa0458a4acf645 489 SUPERFAMILY SSF141523 274 326 1.57E-18 T 28-03-2018 CJD35_RS14710 d8629b326ae0bf0207aa0458a4acf645 489 SUPERFAMILY SSF141523 382 438 1.57E-18 T 28-03-2018 CJD35_RS14710 d8629b326ae0bf0207aa0458a4acf645 489 Pfam PF01471 Putative peptidoglycan binding domain 214 246 3.2E-7 T 28-03-2018 IPR002477 Peptidoglycan binding-like CJD35_RS14710 d8629b326ae0bf0207aa0458a4acf645 489 Pfam PF03734 L,D-transpeptidase catalytic domain 273 438 1.1E-24 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CJD35_RS14710 d8629b326ae0bf0207aa0458a4acf645 489 Gene3D G3DSA:1.10.101.10 182 250 3.0E-11 T 28-03-2018 IPR002477 Peptidoglycan binding-like CJD35_RS14710 d8629b326ae0bf0207aa0458a4acf645 489 SUPERFAMILY SSF47090 185 248 6.83E-11 T 28-03-2018 IPR002477 Peptidoglycan binding-like CJD35_RS14710 d8629b326ae0bf0207aa0458a4acf645 489 Gene3D G3DSA:2.40.440.10 272 447 3.3E-22 T 28-03-2018 CJD35_RS05960 4cfac093a3000391fc50c81fe47638f6 294 SMART SM00382 49 248 2.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS05960 4cfac093a3000391fc50c81fe47638f6 294 Gene3D G3DSA:3.40.50.300 22 294 3.1E-58 T 28-03-2018 CJD35_RS05960 4cfac093a3000391fc50c81fe47638f6 294 SUPERFAMILY SSF52540 25 258 1.01E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05960 4cfac093a3000391fc50c81fe47638f6 294 Pfam PF00005 ABC transporter 41 191 7.8E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS05960 4cfac093a3000391fc50c81fe47638f6 294 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS08490 7f3d85b4d485ccdf4e0bb2907c074e45 373 Gene3D G3DSA:3.30.420.150 178 373 5.6E-47 T 28-03-2018 CJD35_RS08490 7f3d85b4d485ccdf4e0bb2907c074e45 373 SUPERFAMILY SSF53067 180 369 6.48E-39 T 28-03-2018 CJD35_RS08490 7f3d85b4d485ccdf4e0bb2907c074e45 373 SUPERFAMILY SSF53067 56 176 1.41E-36 T 28-03-2018 CJD35_RS08490 7f3d85b4d485ccdf4e0bb2907c074e45 373 Gene3D G3DSA:3.30.420.40 45 176 2.2E-39 T 28-03-2018 CJD35_RS08490 7f3d85b4d485ccdf4e0bb2907c074e45 373 Pfam PF02541 Ppx/GppA phosphatase family 71 368 4.1E-52 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CJD35_RS17975 7e865dad3d88977070e9a43777f96f38 147 Pfam PF07681 DoxX 22 110 3.7E-18 T 28-03-2018 IPR032808 DoxX family CJD35_RS04595 6860e7787399690ff0d86a06905bec20 142 Gene3D G3DSA:3.10.580.10 1 141 2.7E-30 T 28-03-2018 CJD35_RS04595 6860e7787399690ff0d86a06905bec20 142 Pfam PF00571 CBS domain 12 56 5.8E-9 T 28-03-2018 IPR000644 CBS domain CJD35_RS04595 6860e7787399690ff0d86a06905bec20 142 Pfam PF00571 CBS domain 71 124 2.0E-10 T 28-03-2018 IPR000644 CBS domain CJD35_RS04595 6860e7787399690ff0d86a06905bec20 142 SUPERFAMILY SSF54631 7 140 2.78E-32 T 28-03-2018 CJD35_RS04595 6860e7787399690ff0d86a06905bec20 142 SMART SM00116 78 125 1.6E-9 T 28-03-2018 IPR000644 CBS domain CJD35_RS04595 6860e7787399690ff0d86a06905bec20 142 SMART SM00116 13 60 2.7E-9 T 28-03-2018 IPR000644 CBS domain CJD35_RS02060 786be36df74f59aa44c2f9564244ce9c 183 SUPERFAMILY SSF51064 126 181 1.05E-17 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CJD35_RS02060 786be36df74f59aa44c2f9564244ce9c 183 Hamap MF_01151 Protein GrpE [grpE]. 3 180 17.781 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CJD35_RS02060 786be36df74f59aa44c2f9564244ce9c 183 Pfam PF01025 GrpE 23 180 2.0E-46 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CJD35_RS02060 786be36df74f59aa44c2f9564244ce9c 183 Gene3D G3DSA:2.30.22.10 124 180 2.6E-21 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CJD35_RS02060 786be36df74f59aa44c2f9564244ce9c 183 SUPERFAMILY SSF58014 27 124 9.15E-22 T 28-03-2018 CJD35_RS02060 786be36df74f59aa44c2f9564244ce9c 183 ProSitePatterns PS01071 grpE protein signature. 135 178 - T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CJD35_RS02060 786be36df74f59aa44c2f9564244ce9c 183 PRINTS PR00773 GrpE protein signature 132 147 6.3E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CJD35_RS02060 786be36df74f59aa44c2f9564244ce9c 183 PRINTS PR00773 GrpE protein signature 159 178 6.3E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CJD35_RS02060 786be36df74f59aa44c2f9564244ce9c 183 PRINTS PR00773 GrpE protein signature 46 62 6.3E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CJD35_RS02060 786be36df74f59aa44c2f9564244ce9c 183 PRINTS PR00773 GrpE protein signature 74 89 6.3E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CJD35_RS02060 786be36df74f59aa44c2f9564244ce9c 183 Gene3D G3DSA:3.90.20.20 18 123 4.2E-24 T 28-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CJD35_RS06725 b6504975095aa18ae969f41177969514 1512 SUPERFAMILY SSF56235 31 453 3.28E-144 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS06725 b6504975095aa18ae969f41177969514 1512 Gene3D G3DSA:2.160.20.60 1240 1505 9.3E-97 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CJD35_RS06725 b6504975095aa18ae969f41177969514 1512 Gene3D G3DSA:3.60.20.10 31 462 2.2E-140 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS06725 b6504975095aa18ae969f41177969514 1512 SUPERFAMILY SSF51395 466 1221 6.41E-250 T 28-03-2018 CJD35_RS06725 b6504975095aa18ae969f41177969514 1512 Gene3D G3DSA:3.20.20.70 463 804 3.8E-72 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS06725 b6504975095aa18ae969f41177969514 1512 Gene3D G3DSA:3.20.20.70 805 1238 1.3E-147 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS06725 b6504975095aa18ae969f41177969514 1512 Pfam PF01645 Conserved region in glutamate synthase 819 1186 5.7E-152 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CJD35_RS06725 b6504975095aa18ae969f41177969514 1512 Pfam PF01493 GXGXG motif 1264 1452 9.9E-75 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CJD35_RS06725 b6504975095aa18ae969f41177969514 1512 Pfam PF00310 Glutamine amidotransferases class-II 31 451 2.4E-154 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CJD35_RS06725 b6504975095aa18ae969f41177969514 1512 Pfam PF04898 Glutamate synthase central domain 480 761 7.5E-93 T 28-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CJD35_RS06725 b6504975095aa18ae969f41177969514 1512 SUPERFAMILY SSF69336 1235 1497 4.05E-90 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CJD35_RS04470 f28ec1e4bb347d9eb8309004a546d8ae 138 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 51 69 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CJD35_RS04470 f28ec1e4bb347d9eb8309004a546d8ae 138 PRINTS PR00313 NodO calcium binding signature 46 54 1.0E-9 T 28-03-2018 CJD35_RS04470 f28ec1e4bb347d9eb8309004a546d8ae 138 PRINTS PR00313 NodO calcium binding signature 73 82 1.0E-9 T 28-03-2018 CJD35_RS04470 f28ec1e4bb347d9eb8309004a546d8ae 138 PRINTS PR00313 NodO calcium binding signature 25 36 1.0E-9 T 28-03-2018 CJD35_RS04470 f28ec1e4bb347d9eb8309004a546d8ae 138 PRINTS PR00313 NodO calcium binding signature 64 72 1.0E-9 T 28-03-2018 CJD35_RS04470 f28ec1e4bb347d9eb8309004a546d8ae 138 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 24 42 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CJD35_RS04470 f28ec1e4bb347d9eb8309004a546d8ae 138 Gene3D G3DSA:2.150.10.10 5 133 1.6E-18 T 28-03-2018 CJD35_RS04470 f28ec1e4bb347d9eb8309004a546d8ae 138 SUPERFAMILY SSF51120 10 110 4.58E-18 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CJD35_RS04470 f28ec1e4bb347d9eb8309004a546d8ae 138 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 33 51 - T 28-03-2018 IPR018511 Hemolysin-type calcium-binding conserved site CJD35_RS08935 57310109d87b4b92aa860aa4da6dae07 147 SUPERFAMILY SSF51182 27 133 8.91E-23 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS08935 57310109d87b4b92aa860aa4da6dae07 147 Pfam PF07883 Cupin domain 46 116 8.7E-17 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CJD35_RS08935 57310109d87b4b92aa860aa4da6dae07 147 Gene3D G3DSA:2.60.120.10 2 146 5.0E-23 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS17155 9877a15d4d90559901851a7bad371daf 305 ProSitePatterns PS01125 ROK family signature. 139 164 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CJD35_RS17155 9877a15d4d90559901851a7bad371daf 305 Gene3D G3DSA:3.30.420.40 6 124 4.3E-18 T 28-03-2018 CJD35_RS17155 9877a15d4d90559901851a7bad371daf 305 SUPERFAMILY SSF53067 10 297 7.46E-37 T 28-03-2018 CJD35_RS17155 9877a15d4d90559901851a7bad371daf 305 Pfam PF00480 ROK family 12 297 3.0E-49 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CJD35_RS17155 9877a15d4d90559901851a7bad371daf 305 Gene3D G3DSA:3.30.420.40 125 302 5.1E-30 T 28-03-2018 CJD35_RS14240 b0245e62a790cc89ad32d1acb14cab80 495 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 307 321 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CJD35_RS14240 b0245e62a790cc89ad32d1acb14cab80 495 SMART SM00382 240 366 3.0E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS14240 b0245e62a790cc89ad32d1acb14cab80 495 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 3 69 3.2E-7 T 28-03-2018 IPR007831 General secretory system II, protein E, N-terminal GO:0005524|GO:0006810 CJD35_RS14240 b0245e62a790cc89ad32d1acb14cab80 495 Gene3D G3DSA:3.30.450.90 75 212 2.0E-45 T 28-03-2018 CJD35_RS14240 b0245e62a790cc89ad32d1acb14cab80 495 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 2 481 6.4E-194 T 28-03-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 CJD35_RS14240 b0245e62a790cc89ad32d1acb14cab80 495 Gene3D G3DSA:3.40.50.300 237 488 3.5E-60 T 28-03-2018 CJD35_RS14240 b0245e62a790cc89ad32d1acb14cab80 495 SUPERFAMILY SSF52540 91 481 8.18E-98 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14240 b0245e62a790cc89ad32d1acb14cab80 495 Pfam PF00437 Type II/IV secretion system protein 115 379 2.0E-85 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CJD35_RS14240 b0245e62a790cc89ad32d1acb14cab80 495 SUPERFAMILY SSF160246 2 65 1.83E-14 T 28-03-2018 CJD35_RS07160 29310ca2dd704c51cf1af888d5810f8f 443 Pfam PF00375 Sodium:dicarboxylate symporter family 5 401 1.3E-114 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07160 29310ca2dd704c51cf1af888d5810f8f 443 SUPERFAMILY SSF118215 5 402 2.48E-115 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07160 29310ca2dd704c51cf1af888d5810f8f 443 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 7.1E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07160 29310ca2dd704c51cf1af888d5810f8f 443 PRINTS PR00173 Glutamate-aspartate symporter signature 355 375 7.1E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07160 29310ca2dd704c51cf1af888d5810f8f 443 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 7.1E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07160 29310ca2dd704c51cf1af888d5810f8f 443 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 7.1E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07160 29310ca2dd704c51cf1af888d5810f8f 443 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 7.1E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07160 29310ca2dd704c51cf1af888d5810f8f 443 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 7.1E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS07160 29310ca2dd704c51cf1af888d5810f8f 443 Gene3D G3DSA:1.10.3860.10 1 408 1.9E-118 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS03130 70e200dcf59ee8870aa70e3d1f06413c 204 Pfam PF02108 Flagellar assembly protein FliH 77 191 5.2E-6 T 28-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CJD35_RS21080 71cfc8a773e4fabd557cf7cbf532220f 85 SUPERFAMILY SSF47413 12 78 2.03E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS21080 71cfc8a773e4fabd557cf7cbf532220f 85 Pfam PF01381 Helix-turn-helix 20 74 2.8E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS21080 71cfc8a773e4fabd557cf7cbf532220f 85 Gene3D G3DSA:1.10.260.40 6 85 1.1E-16 T 28-03-2018 CJD35_RS21080 71cfc8a773e4fabd557cf7cbf532220f 85 SMART SM00530 19 74 1.4E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS19235 270085997666af03f6c19bb7427b6e18 713 Pfam PF13872 P-loop containing NTP hydrolase pore-1 388 705 3.6E-112 T 28-03-2018 CJD35_RS19235 270085997666af03f6c19bb7427b6e18 713 SUPERFAMILY SSF53335 107 284 1.07E-17 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS19235 270085997666af03f6c19bb7427b6e18 713 Gene3D G3DSA:3.40.50.150 45 304 3.3E-14 T 28-03-2018 CJD35_RS19235 270085997666af03f6c19bb7427b6e18 713 SUPERFAMILY SSF52540 463 662 3.57E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS19235 270085997666af03f6c19bb7427b6e18 713 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 129 143 5.9E-9 T 28-03-2018 CJD35_RS19235 270085997666af03f6c19bb7427b6e18 713 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 189 201 5.9E-9 T 28-03-2018 CJD35_RS19235 270085997666af03f6c19bb7427b6e18 713 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 209 233 5.9E-9 T 28-03-2018 CJD35_RS19235 270085997666af03f6c19bb7427b6e18 713 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 105 121 5.9E-9 T 28-03-2018 CJD35_RS19235 270085997666af03f6c19bb7427b6e18 713 Gene3D G3DSA:3.40.50.300 305 635 2.8E-9 T 28-03-2018 CJD35_RS19235 270085997666af03f6c19bb7427b6e18 713 Pfam PF05175 Methyltransferase small domain 186 249 1.4E-4 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CJD35_RS19500 3a7aaa6e1bad81bbc93a80961bdd5596 51 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 1 49 1.1E-11 T 28-03-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CJD35_RS19500 3a7aaa6e1bad81bbc93a80961bdd5596 51 Gene3D G3DSA:3.30.2310.20 1 50 2.1E-7 T 28-03-2018 CJD35_RS19500 3a7aaa6e1bad81bbc93a80961bdd5596 51 SUPERFAMILY SSF143011 2 49 4.51E-10 T 28-03-2018 IPR035095 Toxin RelE-like domain CJD35_RS19500 3a7aaa6e1bad81bbc93a80961bdd5596 51 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 1 34 3.5E-8 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CJD35_RS13520 61f4d4afac3ad7fc5c470e3b994e5980 226 SUPERFAMILY SSF52980 3 204 5.09E-27 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CJD35_RS13520 61f4d4afac3ad7fc5c470e3b994e5980 226 Pfam PF09588 YqaJ-like viral recombinase domain 15 156 8.4E-8 T 28-03-2018 IPR019080 YqaJ viral recombinase CJD35_RS13520 61f4d4afac3ad7fc5c470e3b994e5980 226 Gene3D G3DSA:3.90.320.10 2 210 2.5E-35 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CJD35_RS19170 a7f7ecf7f0f2e45e3c39c8ace965c246 311 PIRSF PIRSF037112 1 303 5.9E-98 T 28-03-2018 IPR017113 Antirestriction, ArdC CJD35_RS19170 a7f7ecf7f0f2e45e3c39c8ace965c246 311 Pfam PF08401 Domain of unknown function (DUF1738) 11 127 1.7E-33 T 28-03-2018 IPR013610 Domain of unknown function DUF1738 CJD35_RS05690 9a9121b24cc1b66c5e7016d37d672c3c 201 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 138 192 1.4E-14 T 28-03-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal CJD35_RS05690 9a9121b24cc1b66c5e7016d37d672c3c 201 SUPERFAMILY SSF69754 2 103 1.29E-22 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CJD35_RS05690 9a9121b24cc1b66c5e7016d37d672c3c 201 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 96 8.2E-17 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CJD35_RS05690 9a9121b24cc1b66c5e7016d37d672c3c 201 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 197 19.848 T 28-03-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid CJD35_RS05690 9a9121b24cc1b66c5e7016d37d672c3c 201 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 7.7E-17 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CJD35_RS05690 9a9121b24cc1b66c5e7016d37d672c3c 201 Gene3D G3DSA:3.30.160.100 1 102 8.4E-19 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CJD35_RS14220 f8078faa0afcde565a1d378a18f1c9bf 134 TIGRFAM TIGR01707 gspI: type II secretion system protein I 21 119 4.6E-24 T 28-03-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 CJD35_RS14220 f8078faa0afcde565a1d378a18f1c9bf 134 SUPERFAMILY SSF54523 54 131 3.49E-15 T 28-03-2018 CJD35_RS14220 f8078faa0afcde565a1d378a18f1c9bf 134 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CJD35_RS14220 f8078faa0afcde565a1d378a18f1c9bf 134 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 41 4.5E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CJD35_RS14220 f8078faa0afcde565a1d378a18f1c9bf 134 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 41 2.4E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CJD35_RS14220 f8078faa0afcde565a1d378a18f1c9bf 134 Gene3D G3DSA:3.30.1300.30 48 133 7.9E-18 T 28-03-2018 CJD35_RS14220 f8078faa0afcde565a1d378a18f1c9bf 134 Pfam PF02501 Type II secretion system (T2SS), protein I 55 126 1.6E-18 T 28-03-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 1.8E-25 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 93 104 1.8E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 1.8E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 1.8E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 Pfam PF00106 short chain dehydrogenase 10 202 5.9E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 Gene3D G3DSA:3.40.50.720 9 262 1.5E-53 T 28-03-2018 CJD35_RS06345 def6074f875dd1fa6ff12ec04dd8dcdd 319 SUPERFAMILY SSF51735 4 268 7.88E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS07005 a3c338b9ad98cdedfbe4948c457a002b 153 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 22 132 8.6E-43 T 28-03-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CJD35_RS07005 a3c338b9ad98cdedfbe4948c457a002b 153 PIRSF PIRSF027377 5 139 8.2E-52 T 28-03-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CJD35_RS07005 a3c338b9ad98cdedfbe4948c457a002b 153 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 153 65.136 T 28-03-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CJD35_RS07005 a3c338b9ad98cdedfbe4948c457a002b 153 Gene3D G3DSA:3.30.1130.10 10 141 5.5E-29 T 28-03-2018 CJD35_RS07005 a3c338b9ad98cdedfbe4948c457a002b 153 Pfam PF14489 QueF-like protein 57 135 7.9E-31 T 28-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CJD35_RS07005 a3c338b9ad98cdedfbe4948c457a002b 153 SUPERFAMILY SSF55620 23 132 2.37E-25 T 28-03-2018 CJD35_RS10730 6ef128b7a097ac8fb2c1c2419f409b0f 536 Gene3D G3DSA:3.50.50.60 1 527 9.2E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS10730 6ef128b7a097ac8fb2c1c2419f409b0f 536 Pfam PF01593 Flavin containing amine oxidoreductase 16 328 1.3E-13 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CJD35_RS10730 6ef128b7a097ac8fb2c1c2419f409b0f 536 SUPERFAMILY SSF51905 1 346 5.39E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS10730 6ef128b7a097ac8fb2c1c2419f409b0f 536 SUPERFAMILY SSF51905 381 407 5.39E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 4.8E-30 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 226 237 4.8E-30 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 4.8E-30 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 353 364 4.8E-30 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 4.8E-30 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 276 4.8E-30 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 511 43.183 T 28-03-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 SUPERFAMILY SSF52374 3 353 5.63E-106 T 28-03-2018 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 23 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 Pfam PF09334 tRNA synthetases class I (M) 6 366 4.2E-106 T 28-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 514 4.7E-143 T 28-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 Gene3D G3DSA:3.40.50.620 2 349 5.0E-91 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 Gene3D G3DSA:1.10.730.10 350 517 1.4E-32 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS13180 ab74a1b8fcfe60a8956610b7eba37c6a 522 SUPERFAMILY SSF47323 358 520 4.11E-32 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS19265 84c44fd3758c12cd459ea575576677ac 360 Gene3D G3DSA:1.10.540.10 1 105 1.2E-7 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS19265 84c44fd3758c12cd459ea575576677ac 360 Gene3D G3DSA:1.20.140.10 196 350 4.1E-9 T 28-03-2018 CJD35_RS19265 84c44fd3758c12cd459ea575576677ac 360 SUPERFAMILY SSF56645 8 208 6.15E-24 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS19265 84c44fd3758c12cd459ea575576677ac 360 SUPERFAMILY SSF47203 217 337 1.69E-5 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS19265 84c44fd3758c12cd459ea575576677ac 360 Gene3D G3DSA:2.40.110.10 106 195 3.8E-6 T 28-03-2018 CJD35_RS21365 a449535f570c01534a6b218636d90572 423 Pfam PF01548 Transposase 14 170 1.1E-19 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CJD35_RS21365 a449535f570c01534a6b218636d90572 423 Pfam PF02371 Transposase IS116/IS110/IS902 family 280 363 1.5E-26 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CJD35_RS19470 a449535f570c01534a6b218636d90572 423 Pfam PF01548 Transposase 14 170 1.1E-19 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CJD35_RS19470 a449535f570c01534a6b218636d90572 423 Pfam PF02371 Transposase IS116/IS110/IS902 family 280 363 1.5E-26 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CJD35_RS18245 a449535f570c01534a6b218636d90572 423 Pfam PF01548 Transposase 14 170 1.1E-19 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CJD35_RS18245 a449535f570c01534a6b218636d90572 423 Pfam PF02371 Transposase IS116/IS110/IS902 family 280 363 1.5E-26 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CJD35_RS15300 a449535f570c01534a6b218636d90572 423 Pfam PF01548 Transposase 14 170 1.1E-19 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CJD35_RS15300 a449535f570c01534a6b218636d90572 423 Pfam PF02371 Transposase IS116/IS110/IS902 family 280 363 1.5E-26 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CJD35_RS14300 f12aea943f2a64cf8a4d9ec4dad038ca 263 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 55 73 - T 28-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CJD35_RS14300 f12aea943f2a64cf8a4d9ec4dad038ca 263 Gene3D G3DSA:3.20.20.70 11 263 1.2E-70 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS14300 f12aea943f2a64cf8a4d9ec4dad038ca 263 SUPERFAMILY SSF51366 12 261 2.59E-87 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJD35_RS14300 f12aea943f2a64cf8a4d9ec4dad038ca 263 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 261 36.584 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CJD35_RS14300 f12aea943f2a64cf8a4d9ec4dad038ca 263 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 259 2.9E-94 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CJD35_RS09300 aab3127aa771f0d94fdacc1eb9327f49 312 Pfam PF03668 P-loop ATPase protein family 9 293 3.2E-79 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 CJD35_RS09300 aab3127aa771f0d94fdacc1eb9327f49 312 SUPERFAMILY SSF52540 5 166 4.13E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09300 aab3127aa771f0d94fdacc1eb9327f49 312 Gene3D G3DSA:3.40.50.300 1 20 0.05 T 28-03-2018 CJD35_RS09300 aab3127aa771f0d94fdacc1eb9327f49 312 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 7 294 37.603 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 CJD35_RS09300 aab3127aa771f0d94fdacc1eb9327f49 312 Gene3D G3DSA:3.40.50.300 21 173 6.5E-8 T 28-03-2018 CJD35_RS09300 aab3127aa771f0d94fdacc1eb9327f49 312 PIRSF PIRSF005052 7 297 1.2E-91 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 CJD35_RS19435 9126fb825da1c444b2a6f20dc30f8844 182 SUPERFAMILY SSF46785 12 151 1.41E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19435 9126fb825da1c444b2a6f20dc30f8844 182 Pfam PF01047 MarR family 44 97 2.2E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19435 9126fb825da1c444b2a6f20dc30f8844 182 SMART SM00347 33 133 1.4E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19435 9126fb825da1c444b2a6f20dc30f8844 182 Gene3D G3DSA:1.10.10.10 16 163 4.7E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07635 33c6cea983b0512aea90048b75dae00e 870 Gene3D G3DSA:2.170.130.10 48 178 4.6E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS07635 33c6cea983b0512aea90048b75dae00e 870 Pfam PF00593 TonB dependent receptor 347 857 4.0E-39 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07635 33c6cea983b0512aea90048b75dae00e 870 Gene3D G3DSA:2.40.170.20 179 870 1.4E-63 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07635 33c6cea983b0512aea90048b75dae00e 870 SUPERFAMILY SSF56935 645 846 1.01E-88 T 28-03-2018 CJD35_RS07635 33c6cea983b0512aea90048b75dae00e 870 SUPERFAMILY SSF56935 267 296 1.01E-88 T 28-03-2018 CJD35_RS07635 33c6cea983b0512aea90048b75dae00e 870 SUPERFAMILY SSF56935 38 235 1.01E-88 T 28-03-2018 CJD35_RS07635 33c6cea983b0512aea90048b75dae00e 870 SUPERFAMILY SSF56935 339 614 1.01E-88 T 28-03-2018 CJD35_RS07635 33c6cea983b0512aea90048b75dae00e 870 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 169 3.0E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS13230 6d8b4af843fbfcfcd14b4d1a27a1db2d 206 Gene3D G3DSA:1.20.1050.10 98 206 4.5E-24 T 28-03-2018 CJD35_RS13230 6d8b4af843fbfcfcd14b4d1a27a1db2d 206 SUPERFAMILY SSF47616 83 201 7.24E-24 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS13230 6d8b4af843fbfcfcd14b4d1a27a1db2d 206 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 74 4.2E-14 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS13230 6d8b4af843fbfcfcd14b4d1a27a1db2d 206 Gene3D G3DSA:3.40.30.10 1 97 1.5E-19 T 28-03-2018 CJD35_RS13230 6d8b4af843fbfcfcd14b4d1a27a1db2d 206 Pfam PF13410 Glutathione S-transferase, C-terminal domain 127 184 7.0E-7 T 28-03-2018 CJD35_RS13230 6d8b4af843fbfcfcd14b4d1a27a1db2d 206 SUPERFAMILY SSF52833 2 78 9.31E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS17570 87b86bb5901ae22523ba28681ca57741 412 Pfam PF07690 Major Facilitator Superfamily 26 342 5.8E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS17570 87b86bb5901ae22523ba28681ca57741 412 Gene3D G3DSA:1.20.1250.20 205 404 1.2E-17 T 28-03-2018 CJD35_RS17570 87b86bb5901ae22523ba28681ca57741 412 SUPERFAMILY SSF103473 10 400 1.18E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS17570 87b86bb5901ae22523ba28681ca57741 412 Gene3D G3DSA:1.20.1250.20 12 204 1.1E-32 T 28-03-2018 CJD35_RS06010 a5d103a7a49b6dbf8d13fafa741dd400 168 Pfam PF09351 Domain of unknown function (DUF1993) 5 165 1.3E-61 T 28-03-2018 IPR018531 Domain of unknown function DUF1993 CJD35_RS06010 a5d103a7a49b6dbf8d13fafa741dd400 168 SUPERFAMILY SSF109854 5 167 4.76E-59 T 28-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CJD35_RS06010 a5d103a7a49b6dbf8d13fafa741dd400 168 Gene3D G3DSA:1.20.120.450 2 168 9.4E-65 T 28-03-2018 CJD35_RS01155 8da08e715dd80a6a8d8a5d370648bc04 651 Gene3D G3DSA:3.20.20.450 376 634 3.4E-91 T 28-03-2018 IPR001633 EAL domain CJD35_RS01155 8da08e715dd80a6a8d8a5d370648bc04 651 SUPERFAMILY SSF55073 216 371 1.73E-48 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS01155 8da08e715dd80a6a8d8a5d370648bc04 651 Pfam PF00990 Diguanylate cyclase, GGDEF domain 211 367 3.8E-46 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS01155 8da08e715dd80a6a8d8a5d370648bc04 651 Pfam PF00563 EAL domain 389 618 3.8E-71 T 28-03-2018 IPR001633 EAL domain CJD35_RS01155 8da08e715dd80a6a8d8a5d370648bc04 651 Gene3D G3DSA:3.30.70.270 204 375 1.1E-57 T 28-03-2018 CJD35_RS01155 8da08e715dd80a6a8d8a5d370648bc04 651 SMART SM00267 200 371 1.0E-56 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS01155 8da08e715dd80a6a8d8a5d370648bc04 651 SUPERFAMILY SSF141868 387 629 5.36E-83 T 28-03-2018 IPR001633 EAL domain CJD35_RS01155 8da08e715dd80a6a8d8a5d370648bc04 651 SMART SM00052 381 623 1.1E-96 T 28-03-2018 IPR001633 EAL domain CJD35_RS01155 8da08e715dd80a6a8d8a5d370648bc04 651 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 208 369 5.3E-45 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS09025 fa16fcf7d2a475afcdba70e6bf10495f 161 SUPERFAMILY SSF51230 86 161 2.09E-21 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS09025 fa16fcf7d2a475afcdba70e6bf10495f 161 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 13 161 8.1E-39 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CJD35_RS09025 fa16fcf7d2a475afcdba70e6bf10495f 161 Gene3D G3DSA:2.40.50.100 15 161 2.2E-16 T 28-03-2018 CJD35_RS09025 fa16fcf7d2a475afcdba70e6bf10495f 161 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 117 134 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS09025 fa16fcf7d2a475afcdba70e6bf10495f 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 90 103 5.0E-9 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CJD35_RS09025 fa16fcf7d2a475afcdba70e6bf10495f 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 107 121 5.0E-9 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CJD35_RS09025 fa16fcf7d2a475afcdba70e6bf10495f 161 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 122 135 5.0E-9 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CJD35_RS09025 fa16fcf7d2a475afcdba70e6bf10495f 161 Pfam PF00364 Biotin-requiring enzyme 88 160 3.0E-19 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS20740 7c446920ce00af4d1250d91f7a7c2a43 191 Gene3D G3DSA:3.40.50.180 1 191 2.5E-62 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJD35_RS20740 7c446920ce00af4d1250d91f7a7c2a43 191 SUPERFAMILY SSF52738 4 189 4.58E-54 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJD35_RS20740 7c446920ce00af4d1250d91f7a7c2a43 191 Pfam PF01339 CheB methylesterase 9 170 6.1E-53 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJD35_RS18510 7c446920ce00af4d1250d91f7a7c2a43 191 Gene3D G3DSA:3.40.50.180 1 191 2.5E-62 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJD35_RS18510 7c446920ce00af4d1250d91f7a7c2a43 191 SUPERFAMILY SSF52738 4 189 4.58E-54 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJD35_RS18510 7c446920ce00af4d1250d91f7a7c2a43 191 Pfam PF01339 CheB methylesterase 9 170 6.1E-53 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 SMART SM00052 529 772 2.9E-111 T 28-03-2018 IPR001633 EAL domain CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 Gene3D G3DSA:3.30.450.20 234 372 1.3E-17 T 28-03-2018 CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 Gene3D G3DSA:3.30.70.270 373 527 7.5E-54 T 28-03-2018 CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 241 351 7.6E-7 T 28-03-2018 IPR000014 PAS domain CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 Pfam PF08448 PAS fold 240 349 1.9E-8 T 28-03-2018 IPR013656 PAS fold-4 CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 Pfam PF00990 Diguanylate cyclase, GGDEF domain 358 513 2.7E-43 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 Gene3D G3DSA:3.20.20.450 528 784 4.2E-97 T 28-03-2018 IPR001633 EAL domain CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 SUPERFAMILY SSF55073 363 521 8.63E-44 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 SMART SM00267 347 519 8.0E-56 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 356 513 1.4E-37 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 Pfam PF00563 EAL domain 536 767 1.5E-72 T 28-03-2018 IPR001633 EAL domain CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 SUPERFAMILY SSF55785 239 345 7.85E-12 T 28-03-2018 IPR000014 PAS domain CJD35_RS09005 c3286617d9c5c1f1304ac53586a91e1c 786 SUPERFAMILY SSF141868 536 776 4.97E-86 T 28-03-2018 IPR001633 EAL domain CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 561 7.4E-90 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 Gene3D G3DSA:3.30.930.10 135 590 8.1E-91 T 28-03-2018 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 5 588 1.5E-184 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 4 588 29.62 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 SUPERFAMILY SSF55261 297 423 1.46E-33 T 28-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 2.9E-22 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 478 494 2.9E-22 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 2.9E-22 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 PRINTS PR01042 Aspartyl-tRNA synthetase signature 522 536 2.9E-22 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 SUPERFAMILY SSF55681 115 300 5.18E-94 T 28-03-2018 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 SUPERFAMILY SSF55681 428 588 5.18E-94 T 28-03-2018 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 Gene3D G3DSA:2.40.50.140 1 110 1.1E-25 T 28-03-2018 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 Pfam PF01336 OB-fold nucleic acid binding domain 21 104 4.5E-13 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 SUPERFAMILY SSF50249 4 107 3.0E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS02910 edc7a843e5c96f8dc552c0568e512ab5 594 Pfam PF02938 GAD domain 316 407 6.3E-13 T 28-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CJD35_RS15085 b9c59a634acce5d066670618b009ba07 536 Gene3D G3DSA:3.20.20.80 306 484 1.5E-40 T 28-03-2018 CJD35_RS15085 b9c59a634acce5d066670618b009ba07 536 SUPERFAMILY SSF51445 7 460 1.7E-127 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CJD35_RS15085 b9c59a634acce5d066670618b009ba07 536 Gene3D G3DSA:3.20.20.80 1 305 1.1E-74 T 28-03-2018 CJD35_RS15085 b9c59a634acce5d066670618b009ba07 536 SMART SM00642 16 401 7.3E-116 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CJD35_RS15085 b9c59a634acce5d066670618b009ba07 536 Gene3D G3DSA:2.60.40.1180 485 528 3.3E-7 T 28-03-2018 CJD35_RS15085 b9c59a634acce5d066670618b009ba07 536 Pfam PF00128 Alpha amylase, catalytic domain 31 373 8.0E-88 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CJD35_RS15085 b9c59a634acce5d066670618b009ba07 536 Pfam PF11941 Domain of unknown function (DUF3459) 446 527 3.2E-8 T 28-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CJD35_RS15085 b9c59a634acce5d066670618b009ba07 536 SUPERFAMILY SSF51011 463 529 3.36E-7 T 28-03-2018 CJD35_RS10635 b00bc584bf2ca9bb3dc22ba6c5985a90 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 59 8.3E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS10635 b00bc584bf2ca9bb3dc22ba6c5985a90 209 SUPERFAMILY SSF46689 8 80 6.16E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS10635 b00bc584bf2ca9bb3dc22ba6c5985a90 209 Gene3D G3DSA:1.10.10.60 1 38 2.1E-8 T 28-03-2018 CJD35_RS10635 b00bc584bf2ca9bb3dc22ba6c5985a90 209 Gene3D G3DSA:1.10.260.40 39 136 3.4E-6 T 28-03-2018 CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 Gene3D G3DSA:1.10.10.10 86 167 5.3E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 SUPERFAMILY SSF46785 86 194 7.26E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 Gene3D G3DSA:3.40.190.10 261 345 4.6E-15 T 28-03-2018 CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 SUPERFAMILY SSF46785 4 84 1.07E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 Gene3D G3DSA:3.40.190.10 171 260 1.1E-19 T 28-03-2018 CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 Pfam PF03466 LysR substrate binding domain 171 380 1.5E-37 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 SUPERFAMILY SSF53850 173 381 1.94E-39 T 28-03-2018 CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 6.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 6.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 6.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 2.6E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 89 145 1.1E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS19560 91d931922c6cc0e45cb9cef9b79d0d1e 389 Gene3D G3DSA:1.10.10.10 1 85 1.0E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 Gene3D G3DSA:3.40.50.720 166 452 1.9E-80 T 28-03-2018 CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 SMART SM00919 168 404 1.3E-140 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 Pfam PF00390 Malic enzyme, N-terminal domain 24 155 3.0E-26 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 SUPERFAMILY SSF51735 168 446 1.14E-84 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 SUPERFAMILY SSF53659 436 748 8.22E-78 T 28-03-2018 CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 ProSitePatterns PS00331 Malic enzymes signature. 164 180 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 Gene3D G3DSA:3.40.50.10380 10 165 1.5E-33 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 SMART SM01274 23 156 1.9E-78 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 Pfam PF01515 Phosphate acetyl/butaryl transferase 437 748 4.0E-77 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 Pfam PF03949 Malic enzyme, NAD binding domain 170 365 1.4E-20 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 PIRSF PIRSF036684 3 752 0.0 T 28-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 Gene3D G3DSA:3.40.50.10750 575 724 1.2E-46 T 28-03-2018 CJD35_RS05935 6e6e424df6d2bf74bfdb84eedbf299ef 753 SUPERFAMILY SSF53223 14 166 1.73E-52 T 28-03-2018 CJD35_RS01790 47953665ee5621cbd8c0d97d93e26fdb 543 SUPERFAMILY SSF52540 100 389 5.27E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01790 47953665ee5621cbd8c0d97d93e26fdb 543 SUPERFAMILY SSF52540 4 72 5.27E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01790 47953665ee5621cbd8c0d97d93e26fdb 543 Gene3D G3DSA:3.40.50.300 13 501 4.2E-25 T 28-03-2018 CJD35_RS01790 47953665ee5621cbd8c0d97d93e26fdb 543 Pfam PF05872 Bacterial protein of unknown function (DUF853) 19 520 5.6E-224 T 28-03-2018 IPR033186 Helicase HerA-like C-terminal CJD35_RS15100 b761326b7d2b8ebad6c5bbd24fb93c54 738 Gene3D G3DSA:1.50.10.10 452 674 7.9E-42 T 28-03-2018 CJD35_RS15100 b761326b7d2b8ebad6c5bbd24fb93c54 738 Pfam PF06202 Amylo-alpha-1,6-glucosidase 298 664 8.8E-13 T 28-03-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 CJD35_RS15100 b761326b7d2b8ebad6c5bbd24fb93c54 738 Pfam PF14742 N-terminal domain of (some) glycogen debranching enzymes 42 234 2.5E-53 T 28-03-2018 IPR032856 Putative glycogen debranching enzyme, N-terminal CJD35_RS15100 b761326b7d2b8ebad6c5bbd24fb93c54 738 SUPERFAMILY SSF48208 254 720 2.76E-88 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CJD35_RS15100 b761326b7d2b8ebad6c5bbd24fb93c54 738 Gene3D G3DSA:1.50.10.10 284 451 1.0E-32 T 28-03-2018 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 Gene3D G3DSA:3.90.1170.30 33 121 0.012 T 28-03-2018 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 309 330 5.7E-51 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 366 389 5.7E-51 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 76 96 5.7E-51 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 342 366 5.7E-51 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 409 424 5.7E-51 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 424 444 5.7E-51 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 ProSitePatterns PS00543 HlyD family secretion proteins signature. 409 431 - T 28-03-2018 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 Pfam PF13437 HlyD family secretion protein 297 406 3.9E-16 T 28-03-2018 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 Pfam PF13533 Biotin-lipoyl like 67 102 2.6E-8 T 28-03-2018 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 24 443 4.7E-105 T 28-03-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 CJD35_RS04455 430f0c6484207eb46e138c01a5e36942 445 Gene3D G3DSA:1.20.1600.10 137 397 1.2E-12 T 28-03-2018 CJD35_RS04910 b539b4f7054a583ef34f0a9b177f6f3c 108 Gene3D G3DSA:3.40.1440.10 2 93 5.1E-17 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS04910 b539b4f7054a583ef34f0a9b177f6f3c 108 Pfam PF01541 GIY-YIG catalytic domain 4 78 4.0E-12 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS04910 b539b4f7054a583ef34f0a9b177f6f3c 108 SUPERFAMILY SSF82771 3 90 9.02E-20 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS09840 925545f02ff06f1f2892f7af99803dd2 413 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 211 407 2.4E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJD35_RS09840 925545f02ff06f1f2892f7af99803dd2 413 SUPERFAMILY SSF161098 174 401 2.35E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJD35_RS09840 925545f02ff06f1f2892f7af99803dd2 413 Gene3D G3DSA:1.10.3720.10 20 403 8.8E-44 T 28-03-2018 CJD35_RS09840 925545f02ff06f1f2892f7af99803dd2 413 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 172 410 9.2E-65 T 28-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CJD35_RS09840 925545f02ff06f1f2892f7af99803dd2 413 Pfam PF11812 Domain of unknown function (DUF3333) 15 155 4.2E-35 T 28-03-2018 IPR024573 Domain of unknown function DUF3333 CJD35_RS05090 8433a834a934804e286db6170772347c 205 SUPERFAMILY SSF55729 1 183 1.97E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS05090 8433a834a934804e286db6170772347c 205 Gene3D G3DSA:3.40.630.30 1 202 6.0E-28 T 28-03-2018 CJD35_RS05090 8433a834a934804e286db6170772347c 205 Pfam PF00765 Autoinducer synthase 14 178 2.0E-23 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS05090 8433a834a934804e286db6170772347c 205 PRINTS PR01549 Autoinducer synthesis protein signature 118 139 2.9E-15 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS05090 8433a834a934804e286db6170772347c 205 PRINTS PR01549 Autoinducer synthesis protein signature 40 62 2.9E-15 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS05090 8433a834a934804e286db6170772347c 205 PRINTS PR01549 Autoinducer synthesis protein signature 96 108 2.9E-15 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS05090 8433a834a934804e286db6170772347c 205 PRINTS PR01549 Autoinducer synthesis protein signature 64 82 2.9E-15 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS05090 8433a834a934804e286db6170772347c 205 PRINTS PR01549 Autoinducer synthesis protein signature 19 38 2.9E-15 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS02030 09aa1279b3d4e187b132f9428590b6ee 395 SUPERFAMILY SSF102114 9 392 2.49E-105 T 28-03-2018 CJD35_RS02030 09aa1279b3d4e187b132f9428590b6ee 395 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 21 356 6.3E-87 T 28-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 CJD35_RS02030 09aa1279b3d4e187b132f9428590b6ee 395 Pfam PF06969 HemN C-terminal domain 318 383 3.9E-13 T 28-03-2018 IPR010723 HemN, C-terminal CJD35_RS02030 09aa1279b3d4e187b132f9428590b6ee 395 Pfam PF04055 Radical SAM superfamily 24 191 5.5E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS02030 09aa1279b3d4e187b132f9428590b6ee 395 SMART SM00729 19 238 6.9E-45 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS02030 09aa1279b3d4e187b132f9428590b6ee 395 Gene3D G3DSA:3.20.20.70 12 316 2.3E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS06760 9ed11ccd2fdb6eb9104c615da6fba537 136 SUPERFAMILY SSF52833 4 133 1.81E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS06760 9ed11ccd2fdb6eb9104c615da6fba537 136 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 3.8E-42 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CJD35_RS06760 9ed11ccd2fdb6eb9104c615da6fba537 136 Gene3D G3DSA:3.40.30.10 2 136 2.1E-38 T 28-03-2018 CJD35_RS06760 9ed11ccd2fdb6eb9104c615da6fba537 136 Pfam PF03960 ArsC family 8 115 9.1E-19 T 28-03-2018 IPR006660 Arsenate reductase-like CJD35_RS03520 2b0158478d48de0a586c60146d0da8d6 506 Gene3D G3DSA:3.20.130.10 315 487 5.6E-62 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CJD35_RS03520 2b0158478d48de0a586c60146d0da8d6 506 SUPERFAMILY SSF117457 320 486 9.81E-59 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CJD35_RS03520 2b0158478d48de0a586c60146d0da8d6 506 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 11 285 1.1E-62 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CJD35_RS03520 2b0158478d48de0a586c60146d0da8d6 506 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 327 485 3.5E-46 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CJD35_RS03520 2b0158478d48de0a586c60146d0da8d6 506 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 3.9E-97 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CJD35_RS03520 2b0158478d48de0a586c60146d0da8d6 506 PIRSF PIRSF001394 1 503 1.7E-200 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CJD35_RS03520 2b0158478d48de0a586c60146d0da8d6 506 Pfam PF05683 Fumarase C-terminus 289 487 3.3E-76 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CJD35_RS17450 416a8e9f72173e4cd918c6dceccac135 436 SUPERFAMILY SSF51338 348 428 3.18E-10 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS17450 416a8e9f72173e4cd918c6dceccac135 436 Gene3D G3DSA:2.30.40.10 17 80 2.1E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS17450 416a8e9f72173e4cd918c6dceccac135 436 SUPERFAMILY SSF51338 30 86 5.4E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS17450 416a8e9f72173e4cd918c6dceccac135 436 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 30 425 3.4E-156 T 28-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 CJD35_RS17450 416a8e9f72173e4cd918c6dceccac135 436 Pfam PF01979 Amidohydrolase family 68 426 2.5E-57 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS17450 416a8e9f72173e4cd918c6dceccac135 436 SUPERFAMILY SSF51556 71 372 5.61E-85 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS17450 416a8e9f72173e4cd918c6dceccac135 436 Gene3D G3DSA:3.20.20.140 81 372 3.6E-60 T 28-03-2018 CJD35_RS16185 dbe957481221f7b2e2d3843d55d37802 145 TIGRFAM TIGR00028 Mtu_PIN_fam: toxin-antitoxin system PIN domain toxin 2 128 7.0E-31 T 28-03-2018 IPR006226 PIN domain toxin GO:0016788 CJD35_RS16185 dbe957481221f7b2e2d3843d55d37802 145 Gene3D G3DSA:3.40.50.1010 1 136 9.6E-15 T 28-03-2018 IPR029060 PIN domain-like CJD35_RS16185 dbe957481221f7b2e2d3843d55d37802 145 SUPERFAMILY SSF88723 3 129 7.85E-13 T 28-03-2018 IPR029060 PIN domain-like CJD35_RS16185 dbe957481221f7b2e2d3843d55d37802 145 Pfam PF01850 PIN domain 3 128 1.1E-6 T 28-03-2018 IPR002716 PIN domain CJD35_RS16185 dbe957481221f7b2e2d3843d55d37802 145 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 138 11.97 T 28-03-2018 IPR022907 VapC family GO:0004540 CJD35_RS12800 2f40a80b39ec3dd9851c4fc20829fe88 597 Gene3D G3DSA:1.25.20.10 96 316 1.6E-10 T 28-03-2018 CJD35_RS12800 2f40a80b39ec3dd9851c4fc20829fe88 597 Pfam PF01464 Transglycosylase SLT domain 417 518 1.0E-19 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CJD35_RS12800 2f40a80b39ec3dd9851c4fc20829fe88 597 SUPERFAMILY SSF53955 417 555 2.03E-35 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS12800 2f40a80b39ec3dd9851c4fc20829fe88 597 Gene3D G3DSA:1.10.530.10 415 563 9.0E-27 T 28-03-2018 CJD35_RS12800 2f40a80b39ec3dd9851c4fc20829fe88 597 SUPERFAMILY SSF48435 53 361 8.89E-11 T 28-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 CJD35_RS01590 bc34c879509536abe42bebee3ec9483e 87 Pfam PF01541 GIY-YIG catalytic domain 5 68 1.3E-8 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS01590 bc34c879509536abe42bebee3ec9483e 87 SUPERFAMILY SSF82771 2 82 1.83E-15 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS01590 bc34c879509536abe42bebee3ec9483e 87 Gene3D G3DSA:3.40.1440.10 1 87 1.0E-11 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 422 2.3E-129 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 423 6.9E-207 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 SUPERFAMILY SSF54826 3 137 2.65E-59 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 Pfam PF03952 Enolase, N-terminal domain 4 134 9.0E-62 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 Gene3D G3DSA:3.20.20.120 128 424 9.2E-102 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 SMART SM01193 4 134 9.8E-98 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 Gene3D G3DSA:3.30.390.10 3 127 1.9E-56 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 Hamap MF_00318 Enolase [eno]. 2 411 44.508 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 SUPERFAMILY SSF51604 139 423 3.68E-126 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 SMART SM01192 139 424 5.0E-217 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 PRINTS PR00148 Enolase signature 311 322 4.3E-49 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 PRINTS PR00148 Enolase signature 334 348 4.3E-49 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 PRINTS PR00148 Enolase signature 107 123 4.3E-49 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 PRINTS PR00148 Enolase signature 363 380 4.3E-49 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 PRINTS PR00148 Enolase signature 37 51 4.3E-49 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 PRINTS PR00148 Enolase signature 161 174 4.3E-49 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 ProSitePatterns PS00164 Enolase signature. 334 347 - T 28-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS14815 f454dc725bff27cb0a9f58d69d2c4358 424 PIRSF PIRSF001400 1 424 3.5E-188 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 1.4E-151 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 PIRSF PIRSF001529 1 425 1.3E-162 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 Gene3D G3DSA:1.10.287.40 3 106 1.2E-23 T 28-03-2018 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 8.6E-32 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 8.6E-32 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 8.6E-32 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 8.6E-32 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 8.6E-32 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 3.4E-26 T 28-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 SUPERFAMILY SSF55681 118 419 3.59E-98 T 28-03-2018 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 38.971 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 226 399 2.7E-33 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 Gene3D G3DSA:3.30.930.10 107 426 9.0E-94 T 28-03-2018 CJD35_RS00140 7ec4cb149586cc3ab1007a636b8f7b1f 426 SUPERFAMILY SSF46589 1 114 1.57E-26 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 CJD35_RS04720 e5c5eb36ec999b1745b73fc965176df4 152 Pfam PF02472 Biopolymer transport protein ExbD/TolR 17 142 1.4E-27 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CJD35_RS04720 e5c5eb36ec999b1745b73fc965176df4 152 TIGRFAM TIGR02801 tolR: protein TolR 18 141 5.1E-39 T 28-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 CJD35_RS01400 a115a15693bc2a9edfd9c5d3fe6150da 260 Pfam PF13649 Methyltransferase domain 53 144 1.1E-15 T 28-03-2018 CJD35_RS01400 a115a15693bc2a9edfd9c5d3fe6150da 260 SUPERFAMILY SSF53335 14 193 2.19E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS01400 a115a15693bc2a9edfd9c5d3fe6150da 260 Gene3D G3DSA:3.40.50.150 3 243 1.1E-31 T 28-03-2018 CJD35_RS13300 a79a8d55acaf4db29dd6889c30a972b3 442 Gene3D G3DSA:4.10.320.10 128 197 1.2E-8 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS13300 a79a8d55acaf4db29dd6889c30a972b3 442 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 214 440 1.4E-76 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS13300 a79a8d55acaf4db29dd6889c30a972b3 442 Pfam PF00364 Biotin-requiring enzyme 5 77 7.4E-21 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS13300 a79a8d55acaf4db29dd6889c30a972b3 442 Pfam PF02817 e3 binding domain 159 182 8.4E-6 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CJD35_RS13300 a79a8d55acaf4db29dd6889c30a972b3 442 Gene3D G3DSA:3.90.1170.30 49 104 0.0054 T 28-03-2018 CJD35_RS13300 a79a8d55acaf4db29dd6889c30a972b3 442 SUPERFAMILY SSF52777 206 440 5.34E-76 T 28-03-2018 CJD35_RS13300 a79a8d55acaf4db29dd6889c30a972b3 442 Gene3D G3DSA:3.30.559.10 199 441 8.1E-77 T 28-03-2018 CJD35_RS13300 a79a8d55acaf4db29dd6889c30a972b3 442 SUPERFAMILY SSF51230 2 92 9.42E-27 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS13300 a79a8d55acaf4db29dd6889c30a972b3 442 Gene3D G3DSA:3.90.1170.30 3 48 1.7E-13 T 28-03-2018 CJD35_RS13300 a79a8d55acaf4db29dd6889c30a972b3 442 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CJD35_RS10735 307c46215ef0d07c99b02ee68b18f503 396 Gene3D G3DSA:3.90.380.10 152 388 3.9E-45 T 28-03-2018 CJD35_RS10735 307c46215ef0d07c99b02ee68b18f503 396 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 9.7E-20 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS10735 307c46215ef0d07c99b02ee68b18f503 396 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 85 105 9.7E-20 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS10735 307c46215ef0d07c99b02ee68b18f503 396 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 64 79 9.7E-20 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS10735 307c46215ef0d07c99b02ee68b18f503 396 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 34 59 9.7E-20 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS10735 307c46215ef0d07c99b02ee68b18f503 396 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 146 172 9.7E-20 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS10735 307c46215ef0d07c99b02ee68b18f503 396 Pfam PF00355 Rieske [2Fe-2S] domain 50 132 4.4E-20 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS10735 307c46215ef0d07c99b02ee68b18f503 396 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 198 378 8.0E-31 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CJD35_RS10735 307c46215ef0d07c99b02ee68b18f503 396 SUPERFAMILY SSF50022 24 162 9.82E-48 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS10735 307c46215ef0d07c99b02ee68b18f503 396 SUPERFAMILY SSF55961 164 380 1.33E-36 T 28-03-2018 CJD35_RS10735 307c46215ef0d07c99b02ee68b18f503 396 Gene3D G3DSA:2.102.10.10 47 151 3.0E-25 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS08425 ddd0c7763c572fb4cc6f918cd64a2a59 205 Pfam PF00117 Glutamine amidotransferase class-I 6 199 5.1E-21 T 28-03-2018 IPR017926 Glutamine amidotransferase CJD35_RS08425 ddd0c7763c572fb4cc6f918cd64a2a59 205 SUPERFAMILY SSF52317 3 194 8.6E-51 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS08425 ddd0c7763c572fb4cc6f918cd64a2a59 205 PIRSF PIRSF000495 2 205 1.4E-61 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CJD35_RS08425 ddd0c7763c572fb4cc6f918cd64a2a59 205 Gene3D G3DSA:3.40.50.880 2 204 7.8E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS08425 ddd0c7763c572fb4cc6f918cd64a2a59 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 203 2.1E-58 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CJD35_RS08425 ddd0c7763c572fb4cc6f918cd64a2a59 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 203 33.009 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CJD35_RS13380 317c9d751b859285665aaea2a734bcec 253 SMART SM00852 11 173 6.1E-28 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS13380 317c9d751b859285665aaea2a734bcec 253 SUPERFAMILY SSF53218 7 200 3.66E-38 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS13380 317c9d751b859285665aaea2a734bcec 253 Pfam PF00994 Probable molybdopterin binding domain 11 166 1.2E-29 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS13380 317c9d751b859285665aaea2a734bcec 253 Gene3D G3DSA:3.40.980.10 5 172 1.1E-39 T 28-03-2018 IPR001453 MoaB/Mog domain CJD35_RS06230 2230adba73d0a93ea1071eb9b285f784 125 Pfam PF12680 SnoaL-like domain 9 121 5.9E-13 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS06230 2230adba73d0a93ea1071eb9b285f784 125 SUPERFAMILY SSF54427 5 124 1.94E-17 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS06230 2230adba73d0a93ea1071eb9b285f784 125 Gene3D G3DSA:3.10.450.50 3 125 1.1E-16 T 28-03-2018 CJD35_RS21915 874d5fb0e2150760afa63c2b0e558c1c 600 Gene3D G3DSA:3.40.50.300 80 530 2.7E-38 T 28-03-2018 CJD35_RS21915 874d5fb0e2150760afa63c2b0e558c1c 600 SUPERFAMILY SSF52540 75 529 3.88E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21915 874d5fb0e2150760afa63c2b0e558c1c 600 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 92 529 6.2E-99 T 28-03-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 CJD35_RS12815 f8b68ce0029e8f651f5bacd6aefcf825 539 Gene3D G3DSA:1.25.40.10 437 538 4.6E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS12815 f8b68ce0029e8f651f5bacd6aefcf825 539 SUPERFAMILY SSF48452 349 512 1.4E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS12815 f8b68ce0029e8f651f5bacd6aefcf825 539 Gene3D G3DSA:1.25.40.10 242 436 1.6E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS12815 f8b68ce0029e8f651f5bacd6aefcf825 539 Pfam PF13432 Tetratricopeptide repeat 430 485 5.1E-4 T 28-03-2018 CJD35_RS12815 f8b68ce0029e8f651f5bacd6aefcf825 539 Pfam PF13432 Tetratricopeptide repeat 352 417 6.2E-8 T 28-03-2018 CJD35_RS12815 f8b68ce0029e8f651f5bacd6aefcf825 539 SMART SM00028 383 416 14.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS12815 f8b68ce0029e8f651f5bacd6aefcf825 539 SMART SM00028 417 451 96.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS12815 f8b68ce0029e8f651f5bacd6aefcf825 539 SMART SM00028 19 52 37.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS12815 f8b68ce0029e8f651f5bacd6aefcf825 539 Gene3D G3DSA:1.25.40.10 8 212 1.1E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS01495 11bc78970e1b1b3a04056caa4b8ff111 377 SUPERFAMILY SSF50156 115 201 3.02E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS01495 11bc78970e1b1b3a04056caa4b8ff111 377 Pfam PF13180 PDZ domain 142 200 7.2E-7 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS01495 11bc78970e1b1b3a04056caa4b8ff111 377 Pfam PF02163 Peptidase family M50 13 353 2.8E-77 T 28-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 CJD35_RS01495 11bc78970e1b1b3a04056caa4b8ff111 377 SMART SM00228 119 198 1.9E-9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS01495 11bc78970e1b1b3a04056caa4b8ff111 377 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 142 364 4.0E-51 T 28-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CJD35_RS01495 11bc78970e1b1b3a04056caa4b8ff111 377 Gene3D G3DSA:2.30.42.10 140 232 6.9E-14 T 28-03-2018 CJD35_RS21545 0558c9cba190c9b0241010764efbac09 389 Pfam PF00266 Aminotransferase class-V 5 366 8.6E-61 T 28-03-2018 IPR000192 Aminotransferase class V domain CJD35_RS21545 0558c9cba190c9b0241010764efbac09 389 Gene3D G3DSA:3.90.1150.10 255 368 1.9E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS21545 0558c9cba190c9b0241010764efbac09 389 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CJD35_RS21545 0558c9cba190c9b0241010764efbac09 389 PIRSF PIRSF005572 2 381 6.6E-104 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CJD35_RS21545 0558c9cba190c9b0241010764efbac09 389 Gene3D G3DSA:3.40.640.10 13 254 1.7E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS21545 0558c9cba190c9b0241010764efbac09 389 SUPERFAMILY SSF53383 3 375 1.48E-83 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS18425 0558c9cba190c9b0241010764efbac09 389 Pfam PF00266 Aminotransferase class-V 5 366 8.6E-61 T 28-03-2018 IPR000192 Aminotransferase class V domain CJD35_RS18425 0558c9cba190c9b0241010764efbac09 389 Gene3D G3DSA:3.90.1150.10 255 368 1.9E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS18425 0558c9cba190c9b0241010764efbac09 389 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CJD35_RS18425 0558c9cba190c9b0241010764efbac09 389 PIRSF PIRSF005572 2 381 6.6E-104 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CJD35_RS18425 0558c9cba190c9b0241010764efbac09 389 Gene3D G3DSA:3.40.640.10 13 254 1.7E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS18425 0558c9cba190c9b0241010764efbac09 389 SUPERFAMILY SSF53383 3 375 1.48E-83 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 Gene3D G3DSA:3.30.540.10 1 153 9.3E-43 T 28-03-2018 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 164 190 7.4E-21 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 206 218 7.4E-21 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 112 131 7.4E-21 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 PRINTS PR01959 SuhB family inositol monophosphatase signature 20 42 7.4E-21 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 SUPERFAMILY SSF56655 6 267 7.46E-78 T 28-03-2018 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 Pfam PF00459 Inositol monophosphatase family 9 267 4.0E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 216 240 9.2E-53 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 9.2E-53 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 9.2E-53 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 9.2E-53 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 138 161 9.2E-53 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 9.2E-53 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 Gene3D G3DSA:3.40.190.80 154 270 2.8E-33 T 28-03-2018 CJD35_RS14450 c15e1d0d8a67d5f266c1ffbff1e23336 270 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 219 233 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CJD35_RS16815 7c94fbf57eb5701d283d9358d67a1427 296 PIRSF PIRSF000103 1 293 2.8E-29 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CJD35_RS16815 7c94fbf57eb5701d283d9358d67a1427 296 Gene3D G3DSA:1.10.1040.10 176 291 1.1E-28 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS16815 7c94fbf57eb5701d283d9358d67a1427 296 Gene3D G3DSA:3.40.50.720 4 173 2.2E-15 T 28-03-2018 CJD35_RS16815 7c94fbf57eb5701d283d9358d67a1427 296 SUPERFAMILY SSF51735 4 157 5.03E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS16815 7c94fbf57eb5701d283d9358d67a1427 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 146 1.4E-9 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CJD35_RS16815 7c94fbf57eb5701d283d9358d67a1427 296 Pfam PF09130 Domain of unknown function (DUF1932) 194 264 1.2E-17 T 28-03-2018 IPR015814 Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal CJD35_RS16815 7c94fbf57eb5701d283d9358d67a1427 296 SUPERFAMILY SSF48179 167 268 1.04E-27 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS15880 e4be24565f8e748547b627b968d0afab 470 Gene3D G3DSA:3.40.605.10 53 311 1.1E-8 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS15880 e4be24565f8e748547b627b968d0afab 470 SUPERFAMILY SSF53720 157 404 4.45E-8 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS15880 e4be24565f8e748547b627b968d0afab 470 Pfam PF05893 Acyl-CoA reductase (LuxC) 61 462 1.8E-75 T 28-03-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 CJD35_RS19610 bd65662ab2b3500fc56c53fa332bbd22 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS19610 bd65662ab2b3500fc56c53fa332bbd22 483 Pfam PF00171 Aldehyde dehydrogenase family 21 478 7.5E-166 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS19610 bd65662ab2b3500fc56c53fa332bbd22 483 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 1.9E-203 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CJD35_RS19610 bd65662ab2b3500fc56c53fa332bbd22 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS19610 bd65662ab2b3500fc56c53fa332bbd22 483 Gene3D G3DSA:3.40.309.10 273 464 1.4E-71 T 28-03-2018 CJD35_RS19610 bd65662ab2b3500fc56c53fa332bbd22 483 Gene3D G3DSA:3.40.605.10 8 272 5.4E-97 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS19610 bd65662ab2b3500fc56c53fa332bbd22 483 SUPERFAMILY SSF53720 10 481 1.22E-167 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS18825 e4e6e369650df1fb1b576c0f05d4771f 170 Pfam PF00011 Hsp20/alpha crystallin family 70 168 1.2E-23 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CJD35_RS18825 e4e6e369650df1fb1b576c0f05d4771f 170 Gene3D G3DSA:2.60.40.790 28 168 3.7E-33 T 28-03-2018 IPR008978 HSP20-like chaperone CJD35_RS18825 e4e6e369650df1fb1b576c0f05d4771f 170 SUPERFAMILY SSF49764 34 168 7.33E-34 T 28-03-2018 IPR008978 HSP20-like chaperone CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 SUPERFAMILY SSF51735 2 226 1.32E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 Gene3D G3DSA:3.40.50.720 1 238 1.7E-55 T 28-03-2018 CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.5E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.5E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 4.5E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 4.5E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.5E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.5E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 Pfam PF00106 short chain dehydrogenase 7 193 5.0E-47 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.0E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 9.0E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.0E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15665 534cad577fd927c30f20f02c5c710117 241 PIRSF PIRSF000126 2 240 6.9E-52 T 28-03-2018 CJD35_RS07960 7cd15b27759a071ab53ca50789a16bf8 211 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 6 210 1.5E-75 T 28-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 CJD35_RS07960 7cd15b27759a071ab53ca50789a16bf8 211 Gene3D G3DSA:3.40.30.10 1 99 3.7E-30 T 28-03-2018 CJD35_RS07960 7cd15b27759a071ab53ca50789a16bf8 211 Gene3D G3DSA:1.20.1050.10 100 211 1.2E-24 T 28-03-2018 CJD35_RS07960 7cd15b27759a071ab53ca50789a16bf8 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 83 2.0E-16 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS07960 7cd15b27759a071ab53ca50789a16bf8 211 SUPERFAMILY SSF52833 4 92 4.4E-26 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS07960 7cd15b27759a071ab53ca50789a16bf8 211 Pfam PF13410 Glutathione S-transferase, C-terminal domain 132 181 3.3E-7 T 28-03-2018 CJD35_RS07960 7cd15b27759a071ab53ca50789a16bf8 211 SUPERFAMILY SSF47616 83 210 3.48E-29 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS15755 37551aef56a7c5be46adf5c995b37624 419 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 36 107 3.2E-7 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15755 37551aef56a7c5be46adf5c995b37624 419 SUPERFAMILY SSF56645 30 221 3.4E-29 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS15755 37551aef56a7c5be46adf5c995b37624 419 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 253 384 1.0E-17 T 28-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS15755 37551aef56a7c5be46adf5c995b37624 419 Gene3D G3DSA:1.20.140.10 213 404 3.6E-9 T 28-03-2018 CJD35_RS15755 37551aef56a7c5be46adf5c995b37624 419 Gene3D G3DSA:1.10.540.10 11 115 6.9E-11 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15755 37551aef56a7c5be46adf5c995b37624 419 Gene3D G3DSA:2.40.110.10 127 212 1.2E-13 T 28-03-2018 CJD35_RS15755 37551aef56a7c5be46adf5c995b37624 419 PIRSF PIRSF016578 6 406 5.6E-89 T 28-03-2018 CJD35_RS15755 37551aef56a7c5be46adf5c995b37624 419 SUPERFAMILY SSF47203 248 400 1.31E-10 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS20145 14e645562c76e68cdcff452b7555f8f8 322 SUPERFAMILY SSF52402 17 214 4.57E-10 T 28-03-2018 CJD35_RS20145 14e645562c76e68cdcff452b7555f8f8 322 Gene3D G3DSA:3.40.50.620 14 275 1.2E-10 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 Pfam PF04055 Radical SAM superfamily 463 634 6.1E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 Pfam PF04055 Radical SAM superfamily 53 226 2.7E-8 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 TIGRFAM TIGR03551 F420_cofH: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 421 767 1.2E-152 T 28-03-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 Hamap MF_01612 FO synthase subunit 2 [cofH]. 407 769 48.818 T 28-03-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 SMART SM00729 48 275 9.1E-7 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 SMART SM00729 459 684 0.0033 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 SUPERFAMILY SSF102114 417 759 3.14E-52 T 28-03-2018 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 Hamap MF_01611 FO synthase subunit 1 [cofG]. 44 371 46.925 T 28-03-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 TIGRFAM TIGR03550 F420_cofG: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit 45 369 4.6E-134 T 28-03-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 Gene3D G3DSA:3.20.20.70 402 770 7.3E-56 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 456 766 8.2E-114 T 28-03-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 Gene3D G3DSA:3.20.20.70 7 339 6.7E-38 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS15495 85ab37dedc3748f8e1e1a29c2305bab8 779 SUPERFAMILY SSF102114 15 346 1.83E-42 T 28-03-2018 CJD35_RS16910 023b2bad0ff2233ebc254f82c70334dc 371 Gene3D G3DSA:2.40.50.100 74 141 1.4E-13 T 28-03-2018 CJD35_RS16910 023b2bad0ff2233ebc254f82c70334dc 371 SUPERFAMILY SSF111369 217 309 1.96E-8 T 28-03-2018 CJD35_RS16910 023b2bad0ff2233ebc254f82c70334dc 371 Pfam PF13533 Biotin-lipoyl like 77 123 1.3E-6 T 28-03-2018 CJD35_RS16910 023b2bad0ff2233ebc254f82c70334dc 371 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 86 106 1.4E-5 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CJD35_RS16910 023b2bad0ff2233ebc254f82c70334dc 371 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 357 371 1.4E-5 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CJD35_RS16910 023b2bad0ff2233ebc254f82c70334dc 371 SUPERFAMILY SSF111369 147 201 2.09E-6 T 28-03-2018 CJD35_RS16910 023b2bad0ff2233ebc254f82c70334dc 371 Pfam PF13437 HlyD family secretion protein 242 324 6.1E-15 T 28-03-2018 CJD35_RS16910 023b2bad0ff2233ebc254f82c70334dc 371 Gene3D G3DSA:1.10.287.470 145 201 2.6E-12 T 28-03-2018 CJD35_RS16910 023b2bad0ff2233ebc254f82c70334dc 371 Gene3D G3DSA:1.20.1600.10 202 338 3.1E-11 T 28-03-2018 CJD35_RS16910 023b2bad0ff2233ebc254f82c70334dc 371 SUPERFAMILY SSF111369 75 153 1.27E-8 T 28-03-2018 CJD35_RS06125 e4bc3f95f3c673e7b8ab0ddca8ecb12b 129 SUPERFAMILY SSF81301 19 120 3.43E-34 T 28-03-2018 CJD35_RS06125 e4bc3f95f3c673e7b8ab0ddca8ecb12b 129 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 22 118 3.8E-33 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CJD35_RS06125 e4bc3f95f3c673e7b8ab0ddca8ecb12b 129 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 13 119 23.365 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CJD35_RS06125 e4bc3f95f3c673e7b8ab0ddca8ecb12b 129 Pfam PF02410 Ribosomal silencing factor during starvation 24 118 3.6E-25 T 28-03-2018 CJD35_RS06125 e4bc3f95f3c673e7b8ab0ddca8ecb12b 129 Gene3D G3DSA:3.30.460.10 15 125 8.0E-32 T 28-03-2018 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 SMART SM01231 151 212 3.6E-8 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 360 378 2.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 316 2.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 397 2.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 Gene3D G3DSA:1.20.120.160 1 144 4.2E-29 T 28-03-2018 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 Gene3D G3DSA:2.30.30.40 486 533 6.1E-4 T 28-03-2018 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 260 399 2.6E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 SMART SM00073 1 98 6.0E-13 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 SUPERFAMILY SSF47226 1 119 1.57E-26 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 152 210 1.3E-6 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 SUPERFAMILY SSF47384 152 213 2.71E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 SMART SM00387 257 400 6.2E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 Pfam PF01584 CheW-like domain 405 535 6.8E-13 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 Gene3D G3DSA:2.40.50.180 417 485 0.04 T 28-03-2018 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 SUPERFAMILY SSF55874 217 398 3.8E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 SMART SM00260 392 533 5.3E-10 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 Gene3D G3DSA:1.10.287.560 151 209 9.8E-9 T 28-03-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 SUPERFAMILY SSF50341 399 531 2.35E-18 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 Gene3D G3DSA:3.30.565.10 210 401 1.2E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS09130 1218770a9acb8c5a952f4fb41602b867 800 Pfam PF01627 Hpt domain 3 94 1.9E-14 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJD35_RS17520 3738b1ac4431e47b5f4bdff4ee533f44 209 Pfam PF01292 Prokaryotic cytochrome b561 3 172 8.9E-19 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CJD35_RS17520 3738b1ac4431e47b5f4bdff4ee533f44 209 SUPERFAMILY SSF81342 2 174 9.42E-27 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CJD35_RS17520 3738b1ac4431e47b5f4bdff4ee533f44 209 Gene3D G3DSA:1.20.950.20 1 178 5.4E-26 T 28-03-2018 CJD35_RS11790 f467d85e69330af26e17125b63d0b60b 561 Gene3D G3DSA:2.30.40.10 19 143 3.3E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS11790 f467d85e69330af26e17125b63d0b60b 561 SUPERFAMILY SSF51338 81 92 1.93E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS11790 f467d85e69330af26e17125b63d0b60b 561 SUPERFAMILY SSF51338 516 557 1.93E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS11790 f467d85e69330af26e17125b63d0b60b 561 Gene3D G3DSA:3.20.20.140 211 514 3.1E-58 T 28-03-2018 CJD35_RS11790 f467d85e69330af26e17125b63d0b60b 561 Pfam PF07969 Amidohydrolase family 82 557 1.8E-99 T 28-03-2018 IPR013108 Amidohydrolase 3 CJD35_RS11790 f467d85e69330af26e17125b63d0b60b 561 SUPERFAMILY SSF51556 91 152 8.7E-39 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS11790 f467d85e69330af26e17125b63d0b60b 561 SUPERFAMILY SSF51556 227 517 8.7E-39 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS12955 1ee78691402cf1ca1548d7d1d115ce17 510 Pfam PF01039 Carboxyl transferase domain 29 508 1.4E-192 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CJD35_RS12955 1ee78691402cf1ca1548d7d1d115ce17 510 SUPERFAMILY SSF52096 253 510 1.4E-87 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS12955 1ee78691402cf1ca1548d7d1d115ce17 510 SUPERFAMILY SSF52096 6 256 3.58E-76 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS12955 1ee78691402cf1ca1548d7d1d115ce17 510 Gene3D G3DSA:3.90.226.10 4 255 1.1E-76 T 28-03-2018 CJD35_RS12955 1ee78691402cf1ca1548d7d1d115ce17 510 Gene3D G3DSA:3.90.226.10 256 501 1.2E-72 T 28-03-2018 CJD35_RS13975 fbb2aa1c993e971e14511cd237a76e17 248 SUPERFAMILY SSF46626 221 230 2.7E-27 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS13975 fbb2aa1c993e971e14511cd237a76e17 248 SUPERFAMILY SSF46626 26 163 2.7E-27 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS13975 fbb2aa1c993e971e14511cd237a76e17 248 Gene3D G3DSA:1.10.760.10 45 246 1.4E-25 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS13975 fbb2aa1c993e971e14511cd237a76e17 248 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 15 239 2.8E-113 T 28-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CJD35_RS13975 fbb2aa1c993e971e14511cd237a76e17 248 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 12 236 3.5E-97 T 28-03-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 PRINTS PR00359 B-class P450 signature 148 164 5.2E-31 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 PRINTS PR00359 B-class P450 signature 346 355 5.2E-31 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 PRINTS PR00359 B-class P450 signature 355 366 5.2E-31 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 PRINTS PR00359 B-class P450 signature 165 180 5.2E-31 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 PRINTS PR00359 B-class P450 signature 102 113 5.2E-31 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 PRINTS PR00359 B-class P450 signature 201 223 5.2E-31 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 PRINTS PR00359 B-class P450 signature 326 341 5.2E-31 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 PRINTS PR00359 B-class P450 signature 298 325 5.2E-31 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 Pfam PF00067 Cytochrome P450 207 375 1.4E-19 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 348 357 - T 28-03-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 Gene3D G3DSA:1.10.630.10 17 407 3.1E-59 T 28-03-2018 CJD35_RS15725 f0d44ec158eeb5da738abcc9036c3456 407 SUPERFAMILY SSF48264 16 405 1.17E-79 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.2E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.2E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.2E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.2E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.2E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.2E-58 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 PIRSF PIRSF002133 1 123 2.8E-54 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.5E-66 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 SUPERFAMILY SSF50249 2 123 2.06E-51 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 Pfam PF00164 Ribosomal protein S12/S23 12 123 2.8E-41 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.701 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08525 991e03882a60855c854f4383996ec2aa 123 Gene3D G3DSA:2.40.50.140 1 123 5.7E-64 T 28-03-2018 CJD35_RS00225 dbd98800437351cdeb72994ed6f9d8de 568 Pfam PF00501 AMP-binding enzyme 35 459 5.9E-113 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJD35_RS00225 dbd98800437351cdeb72994ed6f9d8de 568 Gene3D G3DSA:3.40.50.980 25 216 8.4E-40 T 28-03-2018 CJD35_RS00225 dbd98800437351cdeb72994ed6f9d8de 568 Gene3D G3DSA:3.40.50.980 217 367 4.9E-54 T 28-03-2018 CJD35_RS00225 dbd98800437351cdeb72994ed6f9d8de 568 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 2.3E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CJD35_RS00225 dbd98800437351cdeb72994ed6f9d8de 568 SUPERFAMILY SSF56801 14 555 4.45E-154 T 28-03-2018 CJD35_RS00225 dbd98800437351cdeb72994ed6f9d8de 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 28-03-2018 IPR020845 AMP-binding, conserved site CJD35_RS00225 dbd98800437351cdeb72994ed6f9d8de 568 Gene3D G3DSA:3.30.300.30 454 568 6.9E-22 T 28-03-2018 CJD35_RS00225 dbd98800437351cdeb72994ed6f9d8de 568 Gene3D G3DSA:2.30.38.10 368 452 1.3E-25 T 28-03-2018 CJD35_RS17865 e78aa08eb30a070d0742463b7c0342fe 484 Pfam PF13353 4Fe-4S single cluster domain 113 246 2.5E-7 T 28-03-2018 CJD35_RS17865 e78aa08eb30a070d0742463b7c0342fe 484 Gene3D G3DSA:3.20.20.70 101 417 7.1E-31 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS17865 e78aa08eb30a070d0742463b7c0342fe 484 TIGRFAM TIGR03906 quino_hemo_SAM: quinohemoprotein amine dehydrogenase maturation protein 13 482 8.1E-193 T 28-03-2018 IPR023886 Quinohemoprotein amine dehydrogenase, gamma subunit maturation protein CJD35_RS17865 e78aa08eb30a070d0742463b7c0342fe 484 Pfam PF04055 Radical SAM superfamily 111 278 3.7E-14 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS17865 e78aa08eb30a070d0742463b7c0342fe 484 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 361 449 2.2E-15 T 28-03-2018 IPR023885 4Fe4S-binding SPASM domain CJD35_RS17865 e78aa08eb30a070d0742463b7c0342fe 484 SUPERFAMILY SSF102114 102 430 6.02E-44 T 28-03-2018 CJD35_RS07755 9cb0bf22396545d84513b0cb2f660d40 263 SMART SM00382 28 197 8.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS07755 9cb0bf22396545d84513b0cb2f660d40 263 SUPERFAMILY SSF52540 4 230 2.62E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS07755 9cb0bf22396545d84513b0cb2f660d40 263 Pfam PF00005 ABC transporter 20 167 5.3E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS07755 9cb0bf22396545d84513b0cb2f660d40 263 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS07755 9cb0bf22396545d84513b0cb2f660d40 263 Gene3D G3DSA:3.40.50.300 1 236 1.5E-59 T 28-03-2018 CJD35_RS04540 65322b7935746bee0735328753d18084 162 Pfam PF00583 Acetyltransferase (GNAT) family 38 119 5.0E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS04540 65322b7935746bee0735328753d18084 162 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 2 156 2.3E-54 T 28-03-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00250+2.3.1.17|KEGG: 00260+2.3.1.178 CJD35_RS04540 65322b7935746bee0735328753d18084 162 SUPERFAMILY SSF55729 2 122 5.75E-17 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS04540 65322b7935746bee0735328753d18084 162 Gene3D G3DSA:3.40.630.30 1 161 9.2E-25 T 28-03-2018 CJD35_RS12135 0a6c1c93fa4761154316906c1425ee67 133 Pfam PF07027 Protein of unknown function (DUF1318) 29 118 2.7E-21 T 28-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 CJD35_RS01990 f2a708fe963753fbcfad9d736a79dac8 331 Gene3D G3DSA:3.40.50.150 98 305 1.5E-23 T 28-03-2018 CJD35_RS01990 f2a708fe963753fbcfad9d736a79dac8 331 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 51 305 1.1E-48 T 28-03-2018 CJD35_RS01990 f2a708fe963753fbcfad9d736a79dac8 331 SUPERFAMILY SSF53335 52 304 1.79E-29 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS14540 327dada1f2a772eaf821305dec6cd651 536 Gene3D G3DSA:3.40.50.300 2 176 4.0E-41 T 28-03-2018 CJD35_RS14540 327dada1f2a772eaf821305dec6cd651 536 Gene3D G3DSA:1.10.8.60 177 257 2.1E-16 T 28-03-2018 CJD35_RS14540 327dada1f2a772eaf821305dec6cd651 536 Pfam PF12362 DNA polymerase III gamma and tau subunits C terminal 416 527 6.0E-32 T 28-03-2018 IPR022107 DNA polymerase III, subunit gamma/ tau, C-terminal CJD35_RS14540 327dada1f2a772eaf821305dec6cd651 536 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 8 372 9.9E-122 T 28-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CJD35_RS14540 327dada1f2a772eaf821305dec6cd651 536 SMART SM00382 42 189 1.2E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS14540 327dada1f2a772eaf821305dec6cd651 536 Gene3D G3DSA:1.20.272.10 258 378 2.0E-12 T 28-03-2018 CJD35_RS14540 327dada1f2a772eaf821305dec6cd651 536 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 247 387 8.8E-43 T 28-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CJD35_RS14540 327dada1f2a772eaf821305dec6cd651 536 SUPERFAMILY SSF48019 260 383 5.61E-23 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CJD35_RS14540 327dada1f2a772eaf821305dec6cd651 536 Pfam PF13177 DNA polymerase III, delta subunit 25 187 2.6E-39 T 28-03-2018 CJD35_RS14540 327dada1f2a772eaf821305dec6cd651 536 SUPERFAMILY SSF52540 38 232 2.15E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 SUPERFAMILY SSF56655 3 331 8.33E-107 T 28-03-2018 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 Gene3D G3DSA:3.30.540.10 8 201 3.4E-58 T 28-03-2018 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 PIRSF PIRSF500210 1 334 2.1E-114 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 PIRSF PIRSF000904 1 334 2.5E-113 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 Gene3D G3DSA:3.40.190.80 202 334 3.3E-45 T 28-03-2018 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 150 173 8.3E-60 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 308 333 8.3E-60 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 29 56 8.3E-60 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 207 234 8.3E-60 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 181 204 8.3E-60 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 66 92 8.3E-60 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 4 334 42.718 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CJD35_RS02935 e5ef4628656fc4fe79df0f598d835672 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 5 195 1.9E-59 T 28-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CJD35_RS10510 29ba5e495bd4b9c35c2af9ae62d2b1d6 522 Gene3D G3DSA:3.90.1150.10 373 499 3.8E-36 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS10510 29ba5e495bd4b9c35c2af9ae62d2b1d6 522 Gene3D G3DSA:3.40.640.10 106 372 1.1E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS10510 29ba5e495bd4b9c35c2af9ae62d2b1d6 522 SUPERFAMILY SSF53383 69 512 2.24E-95 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS10510 29ba5e495bd4b9c35c2af9ae62d2b1d6 522 Pfam PF00266 Aminotransferase class-V 183 302 1.0E-10 T 28-03-2018 IPR000192 Aminotransferase class V domain CJD35_RS11985 e2770147be13d64e71f0ad99b49ffe70 477 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 5 458 5.4E-181 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CJD35_RS11985 e2770147be13d64e71f0ad99b49ffe70 477 Gene3D G3DSA:3.40.309.10 245 438 6.6E-41 T 28-03-2018 CJD35_RS11985 e2770147be13d64e71f0ad99b49ffe70 477 SUPERFAMILY SSF53720 6 440 7.98E-109 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS11985 e2770147be13d64e71f0ad99b49ffe70 477 Pfam PF00171 Aldehyde dehydrogenase family 18 445 6.9E-109 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS11985 e2770147be13d64e71f0ad99b49ffe70 477 Gene3D G3DSA:3.40.605.10 3 244 2.3E-62 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS11985 e2770147be13d64e71f0ad99b49ffe70 477 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS11985 e2770147be13d64e71f0ad99b49ffe70 477 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 256 267 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS07735 0bd93c5a87994629f80c9cc155739927 264 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 23 252 1.2E-44 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CJD35_RS07735 0bd93c5a87994629f80c9cc155739927 264 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 6 264 26.056 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CJD35_RS07735 0bd93c5a87994629f80c9cc155739927 264 Gene3D G3DSA:3.10.20.10 29 115 5.3E-16 T 28-03-2018 CJD35_RS07735 0bd93c5a87994629f80c9cc155739927 264 SUPERFAMILY SSF53927 12 256 1.71E-64 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CJD35_RS07735 0bd93c5a87994629f80c9cc155739927 264 Pfam PF02634 FdhD/NarQ family 28 255 2.1E-60 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CJD35_RS07735 0bd93c5a87994629f80c9cc155739927 264 PIRSF PIRSF015626 3 261 1.7E-62 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CJD35_RS07735 0bd93c5a87994629f80c9cc155739927 264 Gene3D G3DSA:3.40.140.10 129 258 2.2E-35 T 28-03-2018 CJD35_RS19555 d02c31afdcb6ef48c217c05ca6793e8f 224 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 3 224 2.2E-120 T 28-03-2018 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 CJD35_RS19555 d02c31afdcb6ef48c217c05ca6793e8f 224 SUPERFAMILY SSF89562 23 184 5.89E-49 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CJD35_RS19555 d02c31afdcb6ef48c217c05ca6793e8f 224 Gene3D G3DSA:3.50.30.40 18 193 1.3E-50 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CJD35_RS19555 d02c31afdcb6ef48c217c05ca6793e8f 224 Pfam PF03737 Aldolase/RraA 26 173 1.9E-39 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CJD35_RS03340 42f9d829517049f4df3b71f41205786b 197 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 44 181 7.3E-8 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CJD35_RS03340 42f9d829517049f4df3b71f41205786b 197 Gene3D G3DSA:3.40.50.10610 12 196 1.7E-15 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CJD35_RS03340 42f9d829517049f4df3b71f41205786b 197 SUPERFAMILY SSF159594 40 189 7.59E-16 T 28-03-2018 CJD35_RS14920 ecba46f5fa13dff1b13d25893a57dc3b 323 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 203 225 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJD35_RS14920 ecba46f5fa13dff1b13d25893a57dc3b 323 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 292 1.2E-57 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CJD35_RS14920 ecba46f5fa13dff1b13d25893a57dc3b 323 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 321 2.7E-29 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CJD35_RS14920 ecba46f5fa13dff1b13d25893a57dc3b 323 Gene3D G3DSA:3.40.50.720 3 117 8.6E-32 T 28-03-2018 CJD35_RS14920 ecba46f5fa13dff1b13d25893a57dc3b 323 SUPERFAMILY SSF52283 4 138 3.59E-34 T 28-03-2018 CJD35_RS14920 ecba46f5fa13dff1b13d25893a57dc3b 323 SUPERFAMILY SSF51735 104 293 3.02E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS14920 ecba46f5fa13dff1b13d25893a57dc3b 323 Gene3D G3DSA:3.40.50.720 118 295 1.0E-55 T 28-03-2018 CJD35_RS17535 f393bbf9a0e4c249a2afc12463b26b07 418 SUPERFAMILY SSF51905 1 54 3.24E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17535 f393bbf9a0e4c249a2afc12463b26b07 418 SUPERFAMILY SSF51905 360 416 3.24E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17535 f393bbf9a0e4c249a2afc12463b26b07 418 SUPERFAMILY SSF51905 107 270 3.24E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17535 f393bbf9a0e4c249a2afc12463b26b07 418 Gene3D G3DSA:3.30.9.10 149 211 4.2E-10 T 28-03-2018 CJD35_RS17535 f393bbf9a0e4c249a2afc12463b26b07 418 Gene3D G3DSA:3.40.50.720 1 148 2.6E-8 T 28-03-2018 CJD35_RS17535 f393bbf9a0e4c249a2afc12463b26b07 418 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 411 47.439 T 28-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 CJD35_RS17535 f393bbf9a0e4c249a2afc12463b26b07 418 SUPERFAMILY SSF54373 270 360 7.98E-17 T 28-03-2018 CJD35_RS17535 f393bbf9a0e4c249a2afc12463b26b07 418 Pfam PF01266 FAD dependent oxidoreductase 2 398 2.5E-73 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CJD35_RS17535 f393bbf9a0e4c249a2afc12463b26b07 418 Gene3D G3DSA:3.30.9.10 212 359 1.6E-25 T 28-03-2018 CJD35_RS14210 b88abfaf4a6b6b526f1aa8ebb2f73ddc 329 SUPERFAMILY SSF158544 221 285 1.36E-16 T 28-03-2018 CJD35_RS14210 b88abfaf4a6b6b526f1aa8ebb2f73ddc 329 Gene3D G3DSA:1.10.40.60 105 219 2.7E-32 T 28-03-2018 CJD35_RS14210 b88abfaf4a6b6b526f1aa8ebb2f73ddc 329 SUPERFAMILY SSF54523 43 105 8.63E-8 T 28-03-2018 CJD35_RS14210 b88abfaf4a6b6b526f1aa8ebb2f73ddc 329 SUPERFAMILY SSF54523 288 326 8.63E-8 T 28-03-2018 CJD35_RS14210 b88abfaf4a6b6b526f1aa8ebb2f73ddc 329 SUPERFAMILY SSF158544 107 217 1.18E-30 T 28-03-2018 CJD35_RS14210 b88abfaf4a6b6b526f1aa8ebb2f73ddc 329 PIRSF PIRSF002786 5 327 4.8E-58 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CJD35_RS14210 b88abfaf4a6b6b526f1aa8ebb2f73ddc 329 Pfam PF03934 Type II secretion system (T2SS), protein K 34 318 9.7E-72 T 28-03-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 CJD35_RS14210 b88abfaf4a6b6b526f1aa8ebb2f73ddc 329 Gene3D G3DSA:1.10.40.60 222 286 2.8E-22 T 28-03-2018 CJD35_RS20655 fe5f7efc2aebe543e2a47cd6065443f1 242 Gene3D G3DSA:3.40.50.300 23 230 4.5E-15 T 28-03-2018 CJD35_RS20655 fe5f7efc2aebe543e2a47cd6065443f1 242 Pfam PF01695 IstB-like ATP binding protein 55 229 7.9E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS20655 fe5f7efc2aebe543e2a47cd6065443f1 242 PIRSF PIRSF003073 1 242 1.2E-69 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS20655 fe5f7efc2aebe543e2a47cd6065443f1 242 SUPERFAMILY SSF52540 94 231 1.56E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20655 fe5f7efc2aebe543e2a47cd6065443f1 242 SMART SM00382 97 229 1.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS07600 33df64a8d546a3e75787731f1ee9a203 243 Pfam PF04116 Fatty acid hydroxylase superfamily 95 230 9.2E-29 T 28-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 CJD35_RS13625 1123e2480db7ea80cba0c554ca3dbb66 487 SUPERFAMILY SSF52540 237 470 2.06E-20 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13625 1123e2480db7ea80cba0c554ca3dbb66 487 Gene3D G3DSA:3.40.1360.10 85 222 1.3E-19 T 28-03-2018 CJD35_RS13625 1123e2480db7ea80cba0c554ca3dbb66 487 Pfam PF13662 Toprim domain 103 186 2.5E-11 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS13625 1123e2480db7ea80cba0c554ca3dbb66 487 Gene3D G3DSA:3.40.50.300 232 487 1.1E-21 T 28-03-2018 CJD35_RS13625 1123e2480db7ea80cba0c554ca3dbb66 487 SUPERFAMILY SSF56731 23 211 3.79E-18 T 28-03-2018 CJD35_RS13625 1123e2480db7ea80cba0c554ca3dbb66 487 Pfam PF03796 DnaB-like helicase C terminal domain 254 482 6.2E-9 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CJD35_RS11040 8ed81614f96564d99ea58f0c7c671a11 431 Pfam PF06564 Cellulose biosynthesis protein BcsQ 150 291 1.1E-4 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CJD35_RS11040 8ed81614f96564d99ea58f0c7c671a11 431 Gene3D G3DSA:3.40.50.300 145 387 1.2E-28 T 28-03-2018 CJD35_RS11040 8ed81614f96564d99ea58f0c7c671a11 431 SUPERFAMILY SSF52172 31 143 6.74E-8 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS11040 8ed81614f96564d99ea58f0c7c671a11 431 Gene3D G3DSA:3.40.50.2300 7 133 1.5E-4 T 28-03-2018 CJD35_RS11040 8ed81614f96564d99ea58f0c7c671a11 431 SUPERFAMILY SSF52540 148 386 1.17E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12755 a5b4b637ff5f856c25e6e62ce0767f37 135 Pfam PF03918 Cytochrome C biogenesis protein 20 133 1.9E-35 T 28-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CJD35_RS10840 dc90022a7cfd017fd9a637e2123a503c 229 SUPERFAMILY SSF100950 5 222 1.38E-56 T 28-03-2018 CJD35_RS10840 dc90022a7cfd017fd9a637e2123a503c 229 Gene3D G3DSA:3.40.50.1360 1 229 1.7E-58 T 28-03-2018 CJD35_RS10840 dc90022a7cfd017fd9a637e2123a503c 229 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 13 226 4.5E-56 T 28-03-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 CJD35_RS10840 dc90022a7cfd017fd9a637e2123a503c 229 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 12 216 3.0E-56 T 28-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CJD35_RS16565 ed38446a9330df8bdcb5fb6ec7c240b4 268 SUPERFAMILY SSF49354 19 161 2.09E-7 T 28-03-2018 IPR008962 PapD-like CJD35_RS16565 ed38446a9330df8bdcb5fb6ec7c240b4 268 Gene3D G3DSA:2.60.40.10 23 166 2.3E-17 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS07580 7836c5acdbf197cb59a79dd47ce9f769 137 SUPERFAMILY SSF54427 5 128 5.18E-13 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS07580 7836c5acdbf197cb59a79dd47ce9f769 137 Gene3D G3DSA:3.10.450.50 4 133 1.1E-13 T 28-03-2018 CJD35_RS07580 7836c5acdbf197cb59a79dd47ce9f769 137 Pfam PF12680 SnoaL-like domain 10 126 6.4E-9 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS02915 d742f40133c746920c9f4115dea8dda3 388 Pfam PF00570 HRDC domain 216 282 1.9E-14 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CJD35_RS02915 d742f40133c746920c9f4115dea8dda3 388 SMART SM00474 4 174 2.2E-34 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CJD35_RS02915 d742f40133c746920c9f4115dea8dda3 388 TIGRFAM TIGR01388 rnd: ribonuclease D 6 370 2.8E-110 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CJD35_RS02915 d742f40133c746920c9f4115dea8dda3 388 Gene3D G3DSA:3.30.420.10 3 196 4.7E-41 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS02915 d742f40133c746920c9f4115dea8dda3 388 Hamap MF_01899 Ribonuclease D [rnd]. 4 370 42.7 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CJD35_RS02915 d742f40133c746920c9f4115dea8dda3 388 Gene3D G3DSA:1.10.150.80 198 297 8.9E-17 T 28-03-2018 CJD35_RS02915 d742f40133c746920c9f4115dea8dda3 388 SUPERFAMILY SSF53098 6 210 7.25E-62 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS02915 d742f40133c746920c9f4115dea8dda3 388 Pfam PF01612 3'-5' exonuclease 7 173 5.7E-36 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CJD35_RS02915 d742f40133c746920c9f4115dea8dda3 388 SUPERFAMILY SSF47819 199 296 6.98E-19 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CJD35_RS02915 d742f40133c746920c9f4115dea8dda3 388 SUPERFAMILY SSF47819 310 372 5.75E-8 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CJD35_RS18810 9916a23f7bfaed8b8d2639f0aaf785d1 191 SMART SM00267 11 185 1.0E-28 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18810 9916a23f7bfaed8b8d2639f0aaf785d1 191 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 21 156 8.3E-31 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18810 9916a23f7bfaed8b8d2639f0aaf785d1 191 SUPERFAMILY SSF55073 27 156 2.82E-34 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS18810 9916a23f7bfaed8b8d2639f0aaf785d1 191 Pfam PF00990 Diguanylate cyclase, GGDEF domain 22 155 6.0E-32 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18810 9916a23f7bfaed8b8d2639f0aaf785d1 191 Gene3D G3DSA:3.30.70.270 12 173 4.7E-40 T 28-03-2018 CJD35_RS15225 73ecac7f710471e1c96ba3ae21e6cd6c 298 PIRSF PIRSF015582 1 298 2.2E-72 T 28-03-2018 IPR011206 Citrate lyase beta subunit-like CJD35_RS15225 73ecac7f710471e1c96ba3ae21e6cd6c 298 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 234 9.3E-36 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CJD35_RS15225 73ecac7f710471e1c96ba3ae21e6cd6c 298 Gene3D G3DSA:3.20.20.360 1 272 8.2E-50 T 28-03-2018 CJD35_RS15225 73ecac7f710471e1c96ba3ae21e6cd6c 298 SUPERFAMILY SSF51621 2 246 4.08E-56 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJD35_RS08605 3a3167a945474e3def7d9e6ba9845744 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 28-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08605 3a3167a945474e3def7d9e6ba9845744 103 Gene3D G3DSA:2.30.30.30 1 93 5.7E-33 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CJD35_RS08605 3a3167a945474e3def7d9e6ba9845744 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 98 20.482 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08605 3a3167a945474e3def7d9e6ba9845744 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 102 4.6E-34 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08605 3a3167a945474e3def7d9e6ba9845744 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 102 1.3E-23 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08605 3a3167a945474e3def7d9e6ba9845744 103 SUPERFAMILY SSF50104 3 102 1.92E-33 T 28-03-2018 IPR008991 Translation protein SH3-like domain CJD35_RS08605 3a3167a945474e3def7d9e6ba9845744 103 SMART SM00739 5 32 2.4E-5 T 28-03-2018 IPR005824 KOW CJD35_RS08605 3a3167a945474e3def7d9e6ba9845744 103 Pfam PF00467 KOW motif 8 39 3.9E-7 T 28-03-2018 IPR005824 KOW CJD35_RS22165 5498a948ed7bba9a35105324eceba777 296 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 2 289 4.6E-94 T 28-03-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CJD35_RS22165 5498a948ed7bba9a35105324eceba777 296 Gene3D G3DSA:3.90.25.10 202 271 3.3E-21 T 28-03-2018 CJD35_RS22165 5498a948ed7bba9a35105324eceba777 296 Gene3D G3DSA:3.40.50.720 2 201 6.1E-28 T 28-03-2018 CJD35_RS22165 5498a948ed7bba9a35105324eceba777 296 Pfam PF04321 RmlD substrate binding domain 2 291 1.5E-104 T 28-03-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 CJD35_RS22165 5498a948ed7bba9a35105324eceba777 296 SUPERFAMILY SSF51735 2 291 5.0E-90 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10975 946a12150e79e3ab2f05ff2c4d4e929a 376 SUPERFAMILY SSF53335 25 272 2.76E-72 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS10975 946a12150e79e3ab2f05ff2c4d4e929a 376 Gene3D G3DSA:3.40.50.150 21 282 6.9E-62 T 28-03-2018 CJD35_RS10975 946a12150e79e3ab2f05ff2c4d4e929a 376 Pfam PF01555 DNA methylase 44 263 6.1E-57 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CJD35_RS10975 946a12150e79e3ab2f05ff2c4d4e929a 376 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 47 53 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJD35_RS10975 946a12150e79e3ab2f05ff2c4d4e929a 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 248 268 2.7E-39 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJD35_RS10975 946a12150e79e3ab2f05ff2c4d4e929a 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 206 223 2.7E-39 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJD35_RS10975 946a12150e79e3ab2f05ff2c4d4e929a 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 92 112 2.7E-39 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJD35_RS10975 946a12150e79e3ab2f05ff2c4d4e929a 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 43 57 2.7E-39 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJD35_RS10975 946a12150e79e3ab2f05ff2c4d4e929a 376 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 225 243 2.7E-39 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJD35_RS13455 c841519b8c2eabd1faa848e3fdb5eff4 440 SUPERFAMILY SSF52540 20 244 1.08E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13455 c841519b8c2eabd1faa848e3fdb5eff4 440 Gene3D G3DSA:1.20.272.10 249 343 1.6E-35 T 28-03-2018 CJD35_RS13455 c841519b8c2eabd1faa848e3fdb5eff4 440 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 60 169 6.5E-14 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS13455 c841519b8c2eabd1faa848e3fdb5eff4 440 Pfam PF12002 MgsA AAA+ ATPase C terminal 265 430 1.2E-62 T 28-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal CJD35_RS13455 c841519b8c2eabd1faa848e3fdb5eff4 440 Gene3D G3DSA:1.10.8.60 161 239 3.2E-15 T 28-03-2018 CJD35_RS13455 c841519b8c2eabd1faa848e3fdb5eff4 440 SMART SM00382 56 172 4.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS13455 c841519b8c2eabd1faa848e3fdb5eff4 440 Gene3D G3DSA:3.40.50.300 13 160 3.9E-26 T 28-03-2018 CJD35_RS13455 c841519b8c2eabd1faa848e3fdb5eff4 440 Pfam PF16193 AAA C-terminal domain 191 264 2.4E-17 T 28-03-2018 IPR032423 AAA C-terminal domain CJD35_RS13455 c841519b8c2eabd1faa848e3fdb5eff4 440 SUPERFAMILY SSF48019 250 434 6.23E-70 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CJD35_RS13455 c841519b8c2eabd1faa848e3fdb5eff4 440 Gene3D G3DSA:1.10.3710.10 345 439 1.3E-29 T 28-03-2018 CJD35_RS15090 d48821381ed880c4be145f9e5b99022a 685 Gene3D G3DSA:2.70.98.10 26 273 4.4E-78 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CJD35_RS15090 d48821381ed880c4be145f9e5b99022a 685 Gene3D G3DSA:2.60.40.1180 578 684 3.2E-30 T 28-03-2018 CJD35_RS15090 d48821381ed880c4be145f9e5b99022a 685 Pfam PF14509 Glycosyl-hydrolase 97 C-terminal, oligomerisation 575 676 8.2E-29 T 28-03-2018 IPR029483 Glycosyl-hydrolase 97, C-terminal oligomerisation domain CJD35_RS15090 d48821381ed880c4be145f9e5b99022a 685 Gene3D G3DSA:3.20.20.70 274 577 3.7E-86 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS15090 d48821381ed880c4be145f9e5b99022a 685 Pfam PF14508 Glycosyl-hydrolase 97 N-terminal 30 277 4.9E-65 T 28-03-2018 IPR029486 Glycosyl-hydrolase 97, N-terminal domain CJD35_RS15090 d48821381ed880c4be145f9e5b99022a 685 Pfam PF10566 Glycoside hydrolase 97 285 573 8.8E-104 T 28-03-2018 IPR019563 Glycosyl-hydrolase 97, catalytic domain CJD35_RS04360 84c245e2a3c430461763aada7e81087c 608 Pfam PF06213 Cobalamin biosynthesis protein CobT 5 275 9.8E-84 T 28-03-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 CJD35_RS04360 84c245e2a3c430461763aada7e81087c 608 SMART SM00327 400 602 0.0014 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS04360 84c245e2a3c430461763aada7e81087c 608 PIRSF PIRSF031715 1 608 2.1E-251 T 28-03-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 CJD35_RS04360 84c245e2a3c430461763aada7e81087c 608 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 390 606 9.3E-105 T 28-03-2018 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 CJD35_RS04360 84c245e2a3c430461763aada7e81087c 608 Gene3D G3DSA:3.40.50.410 373 603 1.1E-14 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS04360 84c245e2a3c430461763aada7e81087c 608 SUPERFAMILY SSF53300 403 599 1.7E-15 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS04360 84c245e2a3c430461763aada7e81087c 608 TIGRFAM TIGR01651 CobT: cobaltochelatase, CobT subunit 8 607 4.7E-259 T 28-03-2018 IPR006538 Cobalt chelatase, CobT subunit GO:0009236 KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 SUPERFAMILY SSF52540 306 579 6.61E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 SMART SM00464 4 196 1.1E-66 T 28-03-2018 IPR003111 Lon, substrate-binding domain CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 564 766 5.7E-94 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 SUPERFAMILY SSF88697 6 195 1.19E-46 T 28-03-2018 IPR015947 PUA-like domain CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 697 716 1.2E-54 T 28-03-2018 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 589 605 1.2E-54 T 28-03-2018 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 667 686 1.2E-54 T 28-03-2018 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 720 738 1.2E-54 T 28-03-2018 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 351 370 1.2E-54 T 28-03-2018 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 Gene3D G3DSA:3.30.230.10 582 766 5.7E-66 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 SUPERFAMILY SSF54211 589 764 1.29E-55 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 347 483 4.8E-17 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 Gene3D G3DSA:1.10.8.60 500 578 1.1E-29 T 28-03-2018 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 Gene3D G3DSA:2.30.130.40 1 112 1.7E-30 T 28-03-2018 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 PIRSF PIRSF001174 1 769 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 5 195 1.0E-36 T 28-03-2018 IPR003111 Lon, substrate-binding domain CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 SMART SM00382 343 495 5.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 Gene3D G3DSA:3.40.50.300 299 499 6.2E-30 T 28-03-2018 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 Gene3D G3DSA:1.10.4060.10 116 205 9.9E-26 T 28-03-2018 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 TIGRFAM TIGR00763 lon: endopeptidase La 6 765 4.0E-289 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CJD35_RS14530 91f089cdf50d3f8a6d7974ef3df71d36 798 Hamap MF_01973 Lon protease [lon]. 5 766 69.023 T 28-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CJD35_RS01670 fabe1293856a085936ac2f881c68b375 340 Pfam PF02628 Cytochrome oxidase assembly protein 12 327 1.2E-108 T 28-03-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 CJD35_RS01670 fabe1293856a085936ac2f881c68b375 340 Hamap MF_01665 Heme A synthase [ctaA]. 8 338 25.104 T 28-03-2018 IPR023754 Heme A synthase, type 2 GO:0006784|GO:0016020|GO:0016627|GO:0055114 Reactome: R-HSA-189451 CJD35_RS02340 d7f4264b63e0a381ade42f59ef55c6d4 844 Pfam PF17092 Penicillin-binding protein OB-like domain 359 456 3.2E-12 T 28-03-2018 IPR031376 Penicillin-binding protein, OB-like domain CJD35_RS02340 d7f4264b63e0a381ade42f59ef55c6d4 844 Gene3D G3DSA:3.40.710.10 286 804 1.5E-99 T 28-03-2018 CJD35_RS02340 d7f4264b63e0a381ade42f59ef55c6d4 844 SUPERFAMILY SSF53955 71 284 8.44E-65 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS02340 d7f4264b63e0a381ade42f59ef55c6d4 844 Pfam PF00905 Penicillin binding protein transpeptidase domain 460 749 1.8E-18 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CJD35_RS02340 d7f4264b63e0a381ade42f59ef55c6d4 844 Gene3D G3DSA:1.10.3810.10 76 280 6.6E-69 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CJD35_RS02340 d7f4264b63e0a381ade42f59ef55c6d4 844 SUPERFAMILY SSF56601 453 808 4.43E-102 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS02340 d7f4264b63e0a381ade42f59ef55c6d4 844 SUPERFAMILY SSF56601 249 267 4.43E-102 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS02340 d7f4264b63e0a381ade42f59ef55c6d4 844 SUPERFAMILY SSF56601 298 356 4.43E-102 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS02340 d7f4264b63e0a381ade42f59ef55c6d4 844 Pfam PF00912 Transglycosylase 84 263 3.4E-56 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CJD35_RS15255 4cf28d4b39e8256f05a1e7ce1a3c79d1 511 SUPERFAMILY SSF103473 14 200 3.4E-5 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS15255 4cf28d4b39e8256f05a1e7ce1a3c79d1 511 Pfam PF01564 Spermine/spermidine synthase domain 274 448 1.1E-34 T 28-03-2018 CJD35_RS15255 4cf28d4b39e8256f05a1e7ce1a3c79d1 511 Gene3D G3DSA:3.40.50.150 271 485 2.7E-43 T 28-03-2018 CJD35_RS15255 4cf28d4b39e8256f05a1e7ce1a3c79d1 511 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 294 307 - T 28-03-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CJD35_RS15255 4cf28d4b39e8256f05a1e7ce1a3c79d1 511 SUPERFAMILY SSF53335 218 451 1.71E-65 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS15255 4cf28d4b39e8256f05a1e7ce1a3c79d1 511 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 219 489 23.989 T 28-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CJD35_RS17350 74bc63d3fb8b567cd63527f365d5a21f 181 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 46 160 7.6E-19 T 28-03-2018 IPR018673 Protein of unknown function DUF2141 CJD35_RS04245 80aecde9a0a8419cfa72fd7e3a1e5f2c 294 Pfam PF01263 Aldose 1-epimerase 12 167 2.0E-21 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CJD35_RS04245 80aecde9a0a8419cfa72fd7e3a1e5f2c 294 SUPERFAMILY SSF74650 9 289 2.32E-45 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CJD35_RS04245 80aecde9a0a8419cfa72fd7e3a1e5f2c 294 Gene3D G3DSA:2.70.98.10 5 293 3.2E-50 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CJD35_RS08940 2366145962eeedab7f69d1c597a2a529 333 PIRSF PIRSF028757 19 333 9.9E-76 T 28-03-2018 IPR003507 Peptidase family S66 CJD35_RS08940 2366145962eeedab7f69d1c597a2a529 333 Gene3D G3DSA:3.40.50.10740 15 169 1.5E-50 T 28-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CJD35_RS08940 2366145962eeedab7f69d1c597a2a529 333 SUPERFAMILY SSF52317 19 164 4.53E-44 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS08940 2366145962eeedab7f69d1c597a2a529 333 Pfam PF02016 LD-carboxypeptidase 31 317 4.4E-75 T 28-03-2018 IPR003507 Peptidase family S66 CJD35_RS08940 2366145962eeedab7f69d1c597a2a529 333 SUPERFAMILY SSF141986 186 324 2.62E-42 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CJD35_RS08940 2366145962eeedab7f69d1c597a2a529 333 Gene3D G3DSA:3.50.30.60 170 333 2.1E-46 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CJD35_RS12245 4034186fc9c8ce93bf74522bc1d744d9 111 TIGRFAM TIGR02300 FYDLN_acid: TIGR02300 family protein 1 110 1.4E-11 T 28-03-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid CJD35_RS12245 4034186fc9c8ce93bf74522bc1d744d9 111 Pfam PF09538 Protein of unknown function (FYDLN_acid) 1 106 9.0E-27 T 28-03-2018 IPR012644 Conserved hypothetical protein CHP02300, FYDLN acid CJD35_RS13825 94e157919cc4dd93c46d6f8ef403a75b 584 Gene3D G3DSA:3.20.20.450 319 572 1.5E-90 T 28-03-2018 IPR001633 EAL domain CJD35_RS13825 94e157919cc4dd93c46d6f8ef403a75b 584 Pfam PF00563 EAL domain 328 565 5.2E-66 T 28-03-2018 IPR001633 EAL domain CJD35_RS13825 94e157919cc4dd93c46d6f8ef403a75b 584 Gene3D G3DSA:3.30.450.20 34 149 6.3E-4 T 28-03-2018 CJD35_RS13825 94e157919cc4dd93c46d6f8ef403a75b 584 SMART SM00052 322 570 2.8E-94 T 28-03-2018 IPR001633 EAL domain CJD35_RS13825 94e157919cc4dd93c46d6f8ef403a75b 584 Pfam PF00990 Diguanylate cyclase, GGDEF domain 154 308 1.4E-32 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS13825 94e157919cc4dd93c46d6f8ef403a75b 584 SUPERFAMILY SSF141868 327 578 1.26E-80 T 28-03-2018 IPR001633 EAL domain CJD35_RS13825 94e157919cc4dd93c46d6f8ef403a75b 584 Gene3D G3DSA:3.30.70.270 150 318 1.2E-42 T 28-03-2018 CJD35_RS13825 94e157919cc4dd93c46d6f8ef403a75b 584 SUPERFAMILY SSF55073 157 308 3.45E-32 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS13825 94e157919cc4dd93c46d6f8ef403a75b 584 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 153 311 2.0E-27 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS13825 94e157919cc4dd93c46d6f8ef403a75b 584 SMART SM00267 141 312 1.4E-33 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS17070 9d90eb18661304fcecac75259422edb4 342 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 6 328 1.1E-37 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CJD35_RS17070 9d90eb18661304fcecac75259422edb4 342 SUPERFAMILY SSF51726 7 340 4.71E-67 T 28-03-2018 CJD35_RS17070 9d90eb18661304fcecac75259422edb4 342 Gene3D G3DSA:3.20.20.210 2 342 4.0E-87 T 28-03-2018 CJD35_RS17070 9d90eb18661304fcecac75259422edb4 342 PIRSF PIRSF005632 1 342 7.7E-192 T 28-03-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit CJD35_RS05695 21bda05659c946ddf8636b8fe7239f58 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 12 146 2.0E-27 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CJD35_RS05695 21bda05659c946ddf8636b8fe7239f58 155 SUPERFAMILY SSF55804 4 147 1.31E-33 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CJD35_RS05695 21bda05659c946ddf8636b8fe7239f58 155 Gene3D G3DSA:3.40.930.10 2 149 3.2E-29 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CJD35_RS05695 21bda05659c946ddf8636b8fe7239f58 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CJD35_RS21600 d389199698e4315a78e9fcb388f18afa 329 Pfam PF05425 Copper resistance protein D 212 319 5.6E-25 T 28-03-2018 IPR008457 Copper resistance protein D GO:0016021 CJD35_RS10820 b11201ba93fc494ec92168cdaefea01f 370 Gene3D G3DSA:3.30.565.10 102 366 1.6E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10820 b11201ba93fc494ec92168cdaefea01f 370 SUPERFAMILY SSF55874 249 365 1.44E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS10820 b11201ba93fc494ec92168cdaefea01f 370 Pfam PF06580 Histidine kinase 175 255 6.6E-24 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CJD35_RS02015 62ade35906ef7c4441b1710cd7f0311b 80 Hamap MF_00797 UPF0335 protein . 2 79 20.817 T 28-03-2018 IPR018753 Azospirillum phage Cd, Gp10 CJD35_RS02015 62ade35906ef7c4441b1710cd7f0311b 80 Pfam PF10073 Uncharacterized protein conserved in bacteria (DUF2312) 7 78 7.8E-36 T 28-03-2018 IPR018753 Azospirillum phage Cd, Gp10 CJD35_RS03905 40ce1e1bb7dd9b6a8f1e52dd77aef0e9 140 SUPERFAMILY SSF52121 3 138 1.83E-46 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS03905 40ce1e1bb7dd9b6a8f1e52dd77aef0e9 140 Gene3D G3DSA:3.40.50.960 1 136 1.6E-49 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS03905 40ce1e1bb7dd9b6a8f1e52dd77aef0e9 140 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 2 135 5.4E-44 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS03905 40ce1e1bb7dd9b6a8f1e52dd77aef0e9 140 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 1 138 22.004 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS03905 40ce1e1bb7dd9b6a8f1e52dd77aef0e9 140 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 3 133 1.3E-31 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS04885 dea87034059ea3f6e072580179d386a7 433 Pfam PF06966 Protein of unknown function (DUF1295) 328 402 3.6E-5 T 28-03-2018 IPR010721 Protein of unknown function DUF1295 CJD35_RS12730 a83066a44fd852a2684b49563ee6ceef 398 TIGRFAM TIGR00937 2A51: chromate efflux transporter 22 381 4.4E-88 T 28-03-2018 IPR014047 Chromate transporter, long chain CJD35_RS12730 a83066a44fd852a2684b49563ee6ceef 398 Pfam PF02417 Chromate transporter 17 178 1.3E-28 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CJD35_RS12730 a83066a44fd852a2684b49563ee6ceef 398 Pfam PF02417 Chromate transporter 227 393 1.9E-27 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CJD35_RS12730 a83066a44fd852a2684b49563ee6ceef 398 PIRSF PIRSF004810 1 398 1.2E-85 T 28-03-2018 IPR014047 Chromate transporter, long chain CJD35_RS10095 be175836e21fbd1270be17e3d0fcf441 322 Pfam PF01544 CorA-like Mg2+ transporter protein 32 318 2.4E-60 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CJD35_RS10095 be175836e21fbd1270be17e3d0fcf441 322 SUPERFAMILY SSF144083 258 319 7.72E-18 T 28-03-2018 CJD35_RS10095 be175836e21fbd1270be17e3d0fcf441 322 Gene3D G3DSA:3.30.460.20 1 130 1.1E-29 T 28-03-2018 CJD35_RS10095 be175836e21fbd1270be17e3d0fcf441 322 Gene3D G3DSA:1.20.58.340 133 252 5.8E-29 T 28-03-2018 CJD35_RS10095 be175836e21fbd1270be17e3d0fcf441 322 Gene3D G3DSA:1.20.58.340 253 322 1.1E-15 T 28-03-2018 CJD35_RS10095 be175836e21fbd1270be17e3d0fcf441 322 SUPERFAMILY SSF143865 2 248 6.02E-64 T 28-03-2018 CJD35_RS15020 6cdac5ff61392bd4a5fe6ecc051340cb 267 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 262 3.3E-45 T 28-03-2018 CJD35_RS15020 6cdac5ff61392bd4a5fe6ecc051340cb 267 SUPERFAMILY SSF51735 8 262 1.87E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15020 6cdac5ff61392bd4a5fe6ecc051340cb 267 Gene3D G3DSA:3.40.50.720 3 267 3.3E-61 T 28-03-2018 CJD35_RS15020 6cdac5ff61392bd4a5fe6ecc051340cb 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.2E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15020 6cdac5ff61392bd4a5fe6ecc051340cb 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 1.2E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15020 6cdac5ff61392bd4a5fe6ecc051340cb 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.2E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15020 6cdac5ff61392bd4a5fe6ecc051340cb 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.2E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15020 6cdac5ff61392bd4a5fe6ecc051340cb 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.2E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15020 6cdac5ff61392bd4a5fe6ecc051340cb 267 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 1.2E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS07430 240c6b5144c0581757d236f66d20c88a 382 Gene3D G3DSA:2.70.98.10 34 382 1.1E-116 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CJD35_RS07430 240c6b5144c0581757d236f66d20c88a 382 PIRSF PIRSF005096 26 381 2.8E-119 T 28-03-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CJD35_RS07430 240c6b5144c0581757d236f66d20c88a 382 SUPERFAMILY SSF74650 34 378 5.46E-112 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CJD35_RS07430 240c6b5144c0581757d236f66d20c88a 382 Pfam PF01263 Aldose 1-epimerase 45 377 7.8E-90 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CJD35_RS14595 6ec505f712e85370c394ce860b4f2e50 351 SUPERFAMILY SSF75217 116 279 2.03E-33 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CJD35_RS14595 6ec505f712e85370c394ce860b4f2e50 351 Gene3D G3DSA:3.40.1440.10 1 94 3.7E-6 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS14595 6ec505f712e85370c394ce860b4f2e50 351 Pfam PF01541 GIY-YIG catalytic domain 4 73 2.5E-15 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS14595 6ec505f712e85370c394ce860b4f2e50 351 SUPERFAMILY SSF82771 3 73 9.02E-13 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS14595 6ec505f712e85370c394ce860b4f2e50 351 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 120 346 3.7E-50 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CJD35_RS14595 6ec505f712e85370c394ce860b4f2e50 351 Pfam PF00588 SpoU rRNA Methylase family 119 266 4.7E-28 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CJD35_RS14595 6ec505f712e85370c394ce860b4f2e50 351 Gene3D G3DSA:3.40.1280.10 111 277 4.2E-35 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJD35_RS14595 6ec505f712e85370c394ce860b4f2e50 351 SMART SM00465 2 80 4.3E-4 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 5.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 5.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 5.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 5.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 5.7E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 178 9.9E-6 T 28-03-2018 CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 238 2.9E-56 T 28-03-2018 CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 239 3.9E-99 T 28-03-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216 CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 2.1E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 2.1E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 2.1E-14 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 SUPERFAMILY SSF51735 3 239 7.14E-75 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 Gene3D G3DSA:3.40.50.720 1 38 3.9E-5 T 28-03-2018 CJD35_RS01750 df46f5f9b1ca4384c3db060dd77f400f 240 Gene3D G3DSA:3.40.50.720 39 240 3.9E-60 T 28-03-2018 CJD35_RS15010 1fba1119c01bc9a9cd589b69e3479cda 502 Gene3D G3DSA:3.40.309.10 290 483 3.5E-74 T 28-03-2018 CJD35_RS15010 1fba1119c01bc9a9cd589b69e3479cda 502 Gene3D G3DSA:3.40.605.10 18 289 8.9E-110 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS15010 1fba1119c01bc9a9cd589b69e3479cda 502 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 271 278 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS15010 1fba1119c01bc9a9cd589b69e3479cda 502 SUPERFAMILY SSF53720 22 500 2.75E-174 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS15010 1fba1119c01bc9a9cd589b69e3479cda 502 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS15010 1fba1119c01bc9a9cd589b69e3479cda 502 Pfam PF00171 Aldehyde dehydrogenase family 34 497 4.3E-179 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS18150 d0fbea8fe96478210bebdd0fb4b0536a 133 Pfam PF03334 Na+/H+ antiporter subunit 17 97 3.8E-20 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CJD35_RS18150 d0fbea8fe96478210bebdd0fb4b0536a 133 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 16 103 2.4E-26 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CJD35_RS21270 d0fbea8fe96478210bebdd0fb4b0536a 133 Pfam PF03334 Na+/H+ antiporter subunit 17 97 3.8E-20 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CJD35_RS21270 d0fbea8fe96478210bebdd0fb4b0536a 133 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 16 103 2.4E-26 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 CJD35_RS05815 0dd17082759ebc022fcf0ac840677af8 134 SUPERFAMILY SSF51316 5 131 3.09E-56 T 28-03-2018 IPR011057 Mss4-like CJD35_RS05815 0dd17082759ebc022fcf0ac840677af8 134 Pfam PF01641 SelR domain 10 129 3.6E-52 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS05815 0dd17082759ebc022fcf0ac840677af8 134 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 7 131 2.4E-54 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS05815 0dd17082759ebc022fcf0ac840677af8 134 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 7 130 36.584 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CJD35_RS05815 0dd17082759ebc022fcf0ac840677af8 134 Gene3D G3DSA:2.170.150.20 1 134 8.3E-59 T 28-03-2018 CJD35_RS17260 3e5ad3b3be0c9f2d00655bb5ce2fb5d9 397 Pfam PF06965 Na+/H+ antiporter 1 13 381 3.3E-135 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJD35_RS17260 3e5ad3b3be0c9f2d00655bb5ce2fb5d9 397 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 14 381 5.2E-121 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJD35_RS17260 3e5ad3b3be0c9f2d00655bb5ce2fb5d9 397 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 11 387 22.41 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CJD35_RS17260 3e5ad3b3be0c9f2d00655bb5ce2fb5d9 397 Gene3D G3DSA:1.20.1530.10 9 386 2.3E-136 T 28-03-2018 IPR023171 Na/H antiporter domain CJD35_RS04195 e6264245cfc7d8a8de8a0ff89a240257 626 Pfam PF01964 Radical SAM ThiC family 118 561 3.5E-199 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CJD35_RS04195 e6264245cfc7d8a8de8a0ff89a240257 626 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 116 564 1.5E-214 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CJD35_RS04195 e6264245cfc7d8a8de8a0ff89a240257 626 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 116 566 56.201 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CJD35_RS04195 e6264245cfc7d8a8de8a0ff89a240257 626 Pfam PF13667 ThiC-associated domain 11 74 9.6E-22 T 28-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CJD35_RS14400 9425848364007cd96d44308beb800198 203 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 165 9.3E-39 T 28-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS06005 10c20a8268df94d36884d82689acdc3c 160 Gene3D G3DSA:2.40.50.110 71 157 9.5E-4 T 28-03-2018 CJD35_RS05535 3f00b08870f4f2b9207ecc6353bde56b 645 Pfam PF10088 Uncharacterised protein conserved in bacteria (DUF2326) 549 626 4.1E-7 T 28-03-2018 IPR018760 Protein of unknown function DUF2326 CJD35_RS05535 3f00b08870f4f2b9207ecc6353bde56b 645 Gene3D G3DSA:3.40.50.300 56 457 1.5E-4 T 28-03-2018 CJD35_RS02440 c67e52a7ecb001f11b0ee6bbb6b7bc68 455 TIGRFAM TIGR03097 PEP_O_lig_1: probable O-glycosylation ligase, exosortase A-associated 2 425 4.4E-59 T 28-03-2018 IPR017528 Conserved hypothetical protein CHP03097, O-antigen ligase-related CJD35_RS02440 c67e52a7ecb001f11b0ee6bbb6b7bc68 455 Pfam PF04932 O-Antigen ligase 211 359 1.9E-11 T 28-03-2018 IPR007016 O-antigen ligase-related CJD35_RS06590 a8cbbdcfb454e932f02572fc683c8267 271 Gene3D G3DSA:3.90.550.10 3 268 1.4E-43 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS06590 a8cbbdcfb454e932f02572fc683c8267 271 Pfam PF00535 Glycosyl transferase family 2 13 124 8.6E-23 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS06590 a8cbbdcfb454e932f02572fc683c8267 271 SUPERFAMILY SSF53448 7 219 7.5E-42 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS14435 84092160a0451cd4042a2ee0bc54d9ca 267 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 39 157 3.4E-43 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14435 84092160a0451cd4042a2ee0bc54d9ca 267 SUPERFAMILY SSF143243 14 189 3.01E-59 T 28-03-2018 CJD35_RS14435 84092160a0451cd4042a2ee0bc54d9ca 267 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 14 164 30.308 T 28-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14435 84092160a0451cd4042a2ee0bc54d9ca 267 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 85 143 9.0E-23 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14435 84092160a0451cd4042a2ee0bc54d9ca 267 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 40 156 2.2E-42 T 28-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14570 1e8400b80e6919e79647cf0090c3bf6e 218 SUPERFAMILY SSF53474 4 211 1.74E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS14570 1e8400b80e6919e79647cf0090c3bf6e 218 Gene3D G3DSA:3.40.50.1820 2 216 4.3E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS14570 1e8400b80e6919e79647cf0090c3bf6e 218 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 25 154 1.2E-11 T 28-03-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 CJD35_RS10445 ccdef3ce9e4e2884f2d5e4e2cbf65145 388 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 348 7.0E-37 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CJD35_RS10445 ccdef3ce9e4e2884f2d5e4e2cbf65145 388 Gene3D G3DSA:3.40.50.2000 2 175 3.7E-35 T 28-03-2018 CJD35_RS10445 ccdef3ce9e4e2884f2d5e4e2cbf65145 388 Gene3D G3DSA:3.40.50.2000 176 348 1.7E-23 T 28-03-2018 CJD35_RS10445 ccdef3ce9e4e2884f2d5e4e2cbf65145 388 SUPERFAMILY SSF53756 6 362 1.68E-94 T 28-03-2018 CJD35_RS10445 ccdef3ce9e4e2884f2d5e4e2cbf65145 388 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 7 142 1.4E-28 T 28-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CJD35_RS10445 ccdef3ce9e4e2884f2d5e4e2cbf65145 388 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 5 359 5.5E-82 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CJD35_RS10445 ccdef3ce9e4e2884f2d5e4e2cbf65145 388 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 363 30.519 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CJD35_RS17325 7693fe938d22a82ccdc5212d3b2aca0a 207 Gene3D G3DSA:3.40.30.10 3 159 5.3E-38 T 28-03-2018 CJD35_RS17325 7693fe938d22a82ccdc5212d3b2aca0a 207 SUPERFAMILY SSF52833 11 200 1.61E-57 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS17325 7693fe938d22a82ccdc5212d3b2aca0a 207 PIRSF PIRSF000239 8 204 1.3E-68 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CJD35_RS17325 7693fe938d22a82ccdc5212d3b2aca0a 207 Gene3D G3DSA:3.30.1020.10 160 205 3.6E-8 T 28-03-2018 CJD35_RS17325 7693fe938d22a82ccdc5212d3b2aca0a 207 Pfam PF00578 AhpC/TSA family 14 143 5.2E-33 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CJD35_RS08040 f5385445c2dc1cf8b5f9be0baa275c32 548 Gene3D G3DSA:2.60.40.380 36 128 1.6E-7 T 28-03-2018 CJD35_RS08040 f5385445c2dc1cf8b5f9be0baa275c32 548 Gene3D G3DSA:3.60.21.10 130 544 2.1E-36 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS08040 f5385445c2dc1cf8b5f9be0baa275c32 548 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 37 124 6.1E-27 T 28-03-2018 IPR032093 Phospholipase D, N-terminal CJD35_RS08040 f5385445c2dc1cf8b5f9be0baa275c32 548 SUPERFAMILY SSF56300 135 299 1.14E-20 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS08040 f5385445c2dc1cf8b5f9be0baa275c32 548 SUPERFAMILY SSF56300 335 366 1.14E-20 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS08040 f5385445c2dc1cf8b5f9be0baa275c32 548 SUPERFAMILY SSF56300 401 513 1.14E-20 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS08040 f5385445c2dc1cf8b5f9be0baa275c32 548 Pfam PF09423 PhoD-like phosphatase 136 517 1.2E-104 T 28-03-2018 IPR018946 Alkaline phosphatase D-related CJD35_RS13190 fdb89d452b99f367f6f3819ac668df57 263 Gene3D G3DSA:3.60.15.10 1 258 5.6E-48 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS13190 fdb89d452b99f367f6f3819ac668df57 263 Pfam PF12706 Beta-lactamase superfamily domain 47 228 4.4E-31 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS13190 fdb89d452b99f367f6f3819ac668df57 263 SUPERFAMILY SSF56281 4 256 1.31E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS13190 fdb89d452b99f367f6f3819ac668df57 263 SMART SM00849 36 227 7.5E-4 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS06190 f7ff392ed54b9683092e14183dcf10bf 265 Pfam PF13501 Sulfur oxidation protein SoxY 40 143 5.9E-22 T 28-03-2018 IPR032711 Ig-like SoxY domain CJD35_RS06190 f7ff392ed54b9683092e14183dcf10bf 265 TIGRFAM TIGR04557 fuse_rel_SoxYZ: quinoprotein dehydrogenase-associated SoxYZ-like carrier 34 249 3.3E-56 T 28-03-2018 IPR030831 Quinoprotein dehydrogenase-associated SoxYZ-like carrier CJD35_RS06190 f7ff392ed54b9683092e14183dcf10bf 265 Pfam PF08770 Sulphur oxidation protein SoxZ 171 251 1.6E-6 T 28-03-2018 IPR014880 Sulphur oxidation protein SoxZ CJD35_RS06190 f7ff392ed54b9683092e14183dcf10bf 265 SUPERFAMILY SSF81296 170 252 5.88E-10 T 28-03-2018 IPR014756 Immunoglobulin E-set CJD35_RS06190 f7ff392ed54b9683092e14183dcf10bf 265 Gene3D G3DSA:2.60.40.10 161 254 8.2E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 SMART SM00116 94 142 4.8E-10 T 28-03-2018 IPR000644 CBS domain CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 SMART SM00116 155 203 5.2E-4 T 28-03-2018 IPR000644 CBS domain CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 Gene3D G3DSA:3.20.20.70 2 466 1.4E-107 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 6 453 1.4E-186 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 292 304 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 Pfam PF00571 CBS domain 147 198 4.5E-4 T 28-03-2018 IPR000644 CBS domain CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 Pfam PF00571 CBS domain 91 136 5.1E-11 T 28-03-2018 IPR000644 CBS domain CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 6 484 82.568 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 SMART SM01240 5 471 0.0 T 28-03-2018 CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 471 1.1E-155 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 SUPERFAMILY SSF51412 3 88 1.24E-118 T 28-03-2018 CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 SUPERFAMILY SSF51412 214 475 1.24E-118 T 28-03-2018 CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 PIRSF PIRSF000130 1 485 2.5E-201 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CJD35_RS09460 5e10c5191ddd7e39afab26bca156d008 485 SUPERFAMILY SSF54631 91 202 8.21E-29 T 28-03-2018 CJD35_RS00490 950b23aea3a0b15cb9fe158aa24c228f 613 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 6 604 2.5E-278 T 28-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 CJD35_RS00490 950b23aea3a0b15cb9fe158aa24c228f 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 156 166 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CJD35_RS00490 950b23aea3a0b15cb9fe158aa24c228f 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 511 522 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CJD35_RS00490 950b23aea3a0b15cb9fe158aa24c228f 613 Pfam PF00920 Dehydratase family 69 602 2.6E-158 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CJD35_RS00490 950b23aea3a0b15cb9fe158aa24c228f 613 SUPERFAMILY SSF52016 425 604 5.02E-56 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJD35_RS00490 950b23aea3a0b15cb9fe158aa24c228f 613 SUPERFAMILY SSF143975 4 424 2.75E-137 T 28-03-2018 CJD35_RS02330 63735ae80f21fab536bcb708c5e6570f 375 Gene3D G3DSA:3.30.160.20 224 306 3.6E-34 T 28-03-2018 CJD35_RS02330 63735ae80f21fab536bcb708c5e6570f 375 Gene3D G3DSA:1.20.58.410 2 114 1.0E-18 T 28-03-2018 CJD35_RS02330 63735ae80f21fab536bcb708c5e6570f 375 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 7 363 1.6E-146 T 28-03-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 CJD35_RS02330 63735ae80f21fab536bcb708c5e6570f 375 SUPERFAMILY SSF75620 30 363 7.98E-126 T 28-03-2018 CJD35_RS02330 63735ae80f21fab536bcb708c5e6570f 375 Pfam PF00472 RF-1 domain 226 336 1.3E-39 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CJD35_RS02330 63735ae80f21fab536bcb708c5e6570f 375 Pfam PF03462 PCRF domain 30 218 5.9E-56 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 CJD35_RS02330 63735ae80f21fab536bcb708c5e6570f 375 SMART SM00937 83 193 1.2E-50 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 CJD35_RS02330 63735ae80f21fab536bcb708c5e6570f 375 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 364 38.411 T 28-03-2018 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 CJD35_RS02330 63735ae80f21fab536bcb708c5e6570f 375 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 243 259 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CJD35_RS01660 14b2041346239709e7cc8cd527134a9e 159 SUPERFAMILY SSF52161 11 149 1.31E-55 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CJD35_RS01660 14b2041346239709e7cc8cd527134a9e 159 PIRSF PIRSF002181 3 158 5.7E-51 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CJD35_RS01660 14b2041346239709e7cc8cd527134a9e 159 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 12 147 1.3E-59 T 28-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS01660 14b2041346239709e7cc8cd527134a9e 159 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 20 147 27.794 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CJD35_RS01660 14b2041346239709e7cc8cd527134a9e 159 Pfam PF00572 Ribosomal protein L13 19 144 1.6E-53 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CJD35_RS01660 14b2041346239709e7cc8cd527134a9e 159 Gene3D G3DSA:3.90.1180.10 3 158 8.0E-60 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CJD35_RS04735 74549c9ba778acf6cae9abf647a6e602 169 Pfam PF00691 OmpA family 65 160 1.1E-21 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS04735 74549c9ba778acf6cae9abf647a6e602 169 ProSitePatterns PS01068 OmpA-like domain. 98 142 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CJD35_RS04735 74549c9ba778acf6cae9abf647a6e602 169 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 63 165 6.7E-44 T 28-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 CJD35_RS04735 74549c9ba778acf6cae9abf647a6e602 169 SUPERFAMILY SSF103088 56 163 4.97E-35 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS04735 74549c9ba778acf6cae9abf647a6e602 169 PRINTS PR01021 OMPA domain signature 66 88 3.2E-15 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJD35_RS04735 74549c9ba778acf6cae9abf647a6e602 169 PRINTS PR01021 OMPA domain signature 111 127 3.2E-15 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJD35_RS04735 74549c9ba778acf6cae9abf647a6e602 169 PRINTS PR01021 OMPA domain signature 96 111 3.2E-15 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJD35_RS04735 74549c9ba778acf6cae9abf647a6e602 169 Gene3D G3DSA:3.30.1330.60 20 168 3.6E-35 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS20960 9f3b51b4edd9f1e7fe04ac9a07194118 563 Pfam PF01348 Type II intron maturase 413 499 1.4E-5 T 28-03-2018 IPR024937 Domain X GO:0006397 CJD35_RS20960 9f3b51b4edd9f1e7fe04ac9a07194118 563 Gene3D G3DSA:3.30.70.270 111 368 5.5E-36 T 28-03-2018 CJD35_RS20960 9f3b51b4edd9f1e7fe04ac9a07194118 563 SUPERFAMILY SSF56672 40 237 2.57E-48 T 28-03-2018 CJD35_RS20960 9f3b51b4edd9f1e7fe04ac9a07194118 563 SUPERFAMILY SSF56672 305 371 2.57E-48 T 28-03-2018 CJD35_RS20960 9f3b51b4edd9f1e7fe04ac9a07194118 563 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 89 232 1.2E-27 T 28-03-2018 IPR000477 Reverse transcriptase domain CJD35_RS07620 6aa6cfc4eb1e77b9b5d17633bd240a1e 204 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 7 190 7.2E-26 T 28-03-2018 IPR003111 Lon, substrate-binding domain CJD35_RS07620 6aa6cfc4eb1e77b9b5d17633bd240a1e 204 SUPERFAMILY SSF88697 6 190 6.71E-43 T 28-03-2018 IPR015947 PUA-like domain CJD35_RS07620 6aa6cfc4eb1e77b9b5d17633bd240a1e 204 Gene3D G3DSA:2.30.130.40 3 105 3.8E-25 T 28-03-2018 CJD35_RS07620 6aa6cfc4eb1e77b9b5d17633bd240a1e 204 Gene3D G3DSA:1.10.4060.10 106 192 1.2E-5 T 28-03-2018 CJD35_RS07620 6aa6cfc4eb1e77b9b5d17633bd240a1e 204 SMART SM00464 5 191 8.4E-15 T 28-03-2018 IPR003111 Lon, substrate-binding domain CJD35_RS00135 e8aff1d6c42c76c0388a2b0eaed3b0e4 146 Pfam PF10116 Protein required for attachment to host cells 8 142 5.0E-41 T 28-03-2018 IPR019291 Host attachment protein CJD35_RS00135 e8aff1d6c42c76c0388a2b0eaed3b0e4 146 Gene3D G3DSA:3.30.420.60 4 138 8.8E-18 T 28-03-2018 CJD35_RS04040 cb2fad0f7d5705b2f5fc83cefb9b5988 72 SMART SM00316 4 72 7.5E-5 T 28-03-2018 IPR022967 RNA-binding domain, S1 CJD35_RS04040 cb2fad0f7d5705b2f5fc83cefb9b5988 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.265 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CJD35_RS04040 cb2fad0f7d5705b2f5fc83cefb9b5988 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 6.9E-27 T 28-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CJD35_RS04040 cb2fad0f7d5705b2f5fc83cefb9b5988 72 Gene3D G3DSA:2.40.50.140 1 72 2.9E-36 T 28-03-2018 CJD35_RS04040 cb2fad0f7d5705b2f5fc83cefb9b5988 72 SUPERFAMILY SSF50249 1 71 1.73E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS04040 cb2fad0f7d5705b2f5fc83cefb9b5988 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 7.2E-34 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CJD35_RS08515 c81b9d21e10a31a764316a64e5d7b4f1 361 Gene3D G3DSA:2.70.70.10 145 342 2.4E-45 T 28-03-2018 CJD35_RS08515 c81b9d21e10a31a764316a64e5d7b4f1 361 Pfam PF01551 Peptidase family M23 239 333 1.4E-32 T 28-03-2018 IPR016047 Peptidase M23 CJD35_RS08515 c81b9d21e10a31a764316a64e5d7b4f1 361 SUPERFAMILY SSF51261 215 337 2.82E-52 T 28-03-2018 IPR011055 Duplicated hybrid motif CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 SUPERFAMILY SSF82051 2 174 1.83E-50 T 28-03-2018 IPR006169 GTP1/OBG domain CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 Gene3D G3DSA:3.40.50.300 175 353 9.4E-34 T 28-03-2018 CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 199 217 2.2E-32 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 243 261 2.2E-32 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 178 198 2.2E-32 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 226 241 2.2E-32 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 Hamap MF_01454 GTPase Obg [obg]. 2 343 43.851 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 Pfam PF01018 GTP1/OBG 5 174 6.1E-54 T 28-03-2018 IPR006169 GTP1/OBG domain CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 337 6.1E-12 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 340 5.0E-125 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 Pfam PF01926 50S ribosome-binding GTPase 177 296 2.5E-26 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 Gene3D G3DSA:2.70.210.12 2 172 3.0E-51 T 28-03-2018 IPR006169 GTP1/OBG domain CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 PIRSF PIRSF002401 1 361 3.6E-120 T 28-03-2018 IPR035101 GTP-binding protein, Obg-type CJD35_RS10630 cfbc67a9080eb918665a45ea4cc59e8b 366 SUPERFAMILY SSF52540 167 340 6.89E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14370 a677b1f919eb1bb0e118e25560bcbfa0 259 Gene3D G3DSA:3.30.420.40 90 259 1.9E-51 T 28-03-2018 CJD35_RS14370 a677b1f919eb1bb0e118e25560bcbfa0 259 SUPERFAMILY SSF53067 125 254 4.21E-34 T 28-03-2018 CJD35_RS14370 a677b1f919eb1bb0e118e25560bcbfa0 259 Pfam PF03309 Type III pantothenate kinase 2 208 1.1E-66 T 28-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CJD35_RS14370 a677b1f919eb1bb0e118e25560bcbfa0 259 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 257 34.952 T 28-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CJD35_RS14370 a677b1f919eb1bb0e118e25560bcbfa0 259 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 252 2.5E-61 T 28-03-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CJD35_RS14370 a677b1f919eb1bb0e118e25560bcbfa0 259 SUPERFAMILY SSF53067 1 122 1.73E-33 T 28-03-2018 CJD35_RS14180 2b94ec611bf6d941b0c243cfe10d62e7 517 SUPERFAMILY SSF56672 28 212 2.05E-27 T 28-03-2018 CJD35_RS14180 2b94ec611bf6d941b0c243cfe10d62e7 517 Gene3D G3DSA:1.10.150.20 108 219 8.9E-5 T 28-03-2018 CJD35_RS08265 123a2826e4b56085b8bf8b1e2cb039bf 245 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 245 118.395 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CJD35_RS08265 123a2826e4b56085b8bf8b1e2cb039bf 245 Gene3D G3DSA:3.20.20.70 8 241 7.9E-97 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS08265 123a2826e4b56085b8bf8b1e2cb039bf 245 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 9 241 5.9E-96 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CJD35_RS08265 123a2826e4b56085b8bf8b1e2cb039bf 245 SUPERFAMILY SSF63892 8 242 2.35E-93 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CJD35_RS08265 123a2826e4b56085b8bf8b1e2cb039bf 245 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 9 241 5.9E-87 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CJD35_RS04510 52788ce45ada0cf4d283d0c6a64e2ec1 451 Pfam PF07690 Major Facilitator Superfamily 68 294 1.1E-24 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS04510 52788ce45ada0cf4d283d0c6a64e2ec1 451 Gene3D G3DSA:1.20.1250.20 18 228 1.7E-22 T 28-03-2018 CJD35_RS04510 52788ce45ada0cf4d283d0c6a64e2ec1 451 Gene3D G3DSA:1.20.1250.20 229 437 1.8E-26 T 28-03-2018 CJD35_RS04510 52788ce45ada0cf4d283d0c6a64e2ec1 451 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CJD35_RS04510 52788ce45ada0cf4d283d0c6a64e2ec1 451 SUPERFAMILY SSF103473 18 435 1.83E-68 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 SUPERFAMILY SSF55957 359 445 6.15E-20 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 3.8E-42 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 374 441 5.5E-14 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 SUPERFAMILY SSF53738 258 366 5.49E-31 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 Gene3D G3DSA:3.40.120.10 267 374 4.3E-32 T 28-03-2018 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 Gene3D G3DSA:3.30.310.50 375 445 1.0E-15 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 SUPERFAMILY SSF53738 156 257 1.65E-28 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 2.2E-32 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 SUPERFAMILY SSF53738 2 181 2.32E-47 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 2.7E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 2.7E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 2.7E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 442 7.3E-185 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 2.6E-18 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 Gene3D G3DSA:3.40.120.10 156 266 4.4E-32 T 28-03-2018 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 444 46.189 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS10250 cc3b614edaba4a44586ebfd6db3d3694 446 Gene3D G3DSA:3.40.120.10 2 154 2.7E-48 T 28-03-2018 CJD35_RS05025 bf79e273ff22721c7c6731778d725bce 242 SUPERFAMILY SSF52540 90 230 2.84E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05025 bf79e273ff22721c7c6731778d725bce 242 Gene3D G3DSA:3.40.50.300 23 230 1.9E-15 T 28-03-2018 CJD35_RS05025 bf79e273ff22721c7c6731778d725bce 242 SMART SM00382 97 229 3.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS05025 bf79e273ff22721c7c6731778d725bce 242 PIRSF PIRSF003073 1 242 6.4E-69 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS05025 bf79e273ff22721c7c6731778d725bce 242 Pfam PF01695 IstB-like ATP binding protein 55 229 2.1E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS05055 bf79e273ff22721c7c6731778d725bce 242 SUPERFAMILY SSF52540 90 230 2.84E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05055 bf79e273ff22721c7c6731778d725bce 242 Gene3D G3DSA:3.40.50.300 23 230 1.9E-15 T 28-03-2018 CJD35_RS05055 bf79e273ff22721c7c6731778d725bce 242 SMART SM00382 97 229 3.4E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS05055 bf79e273ff22721c7c6731778d725bce 242 PIRSF PIRSF003073 1 242 6.4E-69 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CJD35_RS05055 bf79e273ff22721c7c6731778d725bce 242 Pfam PF01695 IstB-like ATP binding protein 55 229 2.1E-52 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS10640 a8f70fd993c0c07d48f93f08d1451083 281 Pfam PF10118 Predicted metal-dependent hydrolase 10 258 3.7E-72 T 28-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 CJD35_RS10640 a8f70fd993c0c07d48f93f08d1451083 281 PIRSF PIRSF007580 1 277 8.8E-63 T 28-03-2018 IPR016516 Uncharacterised conserved protein UCP07580 CJD35_RS12500 bb09cad8c96f9215aaf409c17e0541ba 97 Gene3D G3DSA:3.30.70.100 2 93 2.3E-16 T 28-03-2018 CJD35_RS12500 bb09cad8c96f9215aaf409c17e0541ba 97 SUPERFAMILY SSF54909 1 96 5.37E-26 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS01555 f4448ece373a9bad885ebf600891fcfc 537 Gene3D G3DSA:3.60.110.10 220 510 3.9E-54 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS01555 f4448ece373a9bad885ebf600891fcfc 537 SUPERFAMILY SSF56317 225 498 3.27E-58 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS01555 f4448ece373a9bad885ebf600891fcfc 537 SUPERFAMILY SSF55729 174 187 2.09E-16 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS01555 f4448ece373a9bad885ebf600891fcfc 537 SUPERFAMILY SSF55729 7 147 2.09E-16 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS01555 f4448ece373a9bad885ebf600891fcfc 537 Pfam PF00583 Acetyltransferase (GNAT) family 47 138 4.4E-5 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS01555 f4448ece373a9bad885ebf600891fcfc 537 Gene3D G3DSA:3.40.630.30 1 219 3.5E-26 T 28-03-2018 CJD35_RS01555 f4448ece373a9bad885ebf600891fcfc 537 Pfam PF00795 Carbon-nitrogen hydrolase 228 487 6.4E-30 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS10980 2999e47b0ae85f71fc6cfdddf10c4901 373 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 142 155 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS10980 2999e47b0ae85f71fc6cfdddf10c4901 373 Gene3D G3DSA:3.20.20.20 82 369 5.5E-95 T 28-03-2018 CJD35_RS10980 2999e47b0ae85f71fc6cfdddf10c4901 373 Pfam PF00809 Pterin binding enzyme 108 350 2.2E-71 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS10980 2999e47b0ae85f71fc6cfdddf10c4901 373 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 106 363 1.3E-84 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CJD35_RS10980 2999e47b0ae85f71fc6cfdddf10c4901 373 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 107 122 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS10980 2999e47b0ae85f71fc6cfdddf10c4901 373 SUPERFAMILY SSF51717 105 365 6.02E-85 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CJD35_RS00835 ebcd76c24140b8af5e5a23b0719dad8d 237 Gene3D G3DSA:1.10.3130.10 1 59 7.2E-15 T 28-03-2018 CJD35_RS00835 ebcd76c24140b8af5e5a23b0719dad8d 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 70 106 1.1E-4 T 28-03-2018 IPR001451 Hexapeptide repeat CJD35_RS00835 ebcd76c24140b8af5e5a23b0719dad8d 237 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 153 8.5E-8 T 28-03-2018 IPR001451 Hexapeptide repeat CJD35_RS00835 ebcd76c24140b8af5e5a23b0719dad8d 237 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CJD35_RS00835 ebcd76c24140b8af5e5a23b0719dad8d 237 SUPERFAMILY SSF51161 4 168 1.22E-43 T 28-03-2018 IPR011004 Trimeric LpxA-like CJD35_RS00835 ebcd76c24140b8af5e5a23b0719dad8d 237 Gene3D G3DSA:2.160.10.10 60 225 4.9E-38 T 28-03-2018 CJD35_RS00835 ebcd76c24140b8af5e5a23b0719dad8d 237 PIRSF PIRSF000441 1 224 2.7E-71 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CJD35_RS01125 17bc7ee6345f21e2e364e00fd4f7d55c 222 SUPERFAMILY SSF88946 29 113 2.88E-18 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS01125 17bc7ee6345f21e2e364e00fd4f7d55c 222 Pfam PF08281 Sigma-70, region 4 128 178 1.3E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS01125 17bc7ee6345f21e2e364e00fd4f7d55c 222 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 181 2.2E-19 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS01125 17bc7ee6345f21e2e364e00fd4f7d55c 222 Gene3D G3DSA:1.10.10.10 115 216 1.0E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS01125 17bc7ee6345f21e2e364e00fd4f7d55c 222 Pfam PF04542 Sigma-70 region 2 36 99 1.0E-12 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS01125 17bc7ee6345f21e2e364e00fd4f7d55c 222 SUPERFAMILY SSF88659 122 183 4.36E-13 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS01125 17bc7ee6345f21e2e364e00fd4f7d55c 222 Gene3D G3DSA:1.10.1740.10 19 102 7.4E-17 T 28-03-2018 CJD35_RS01635 449adc9eeffef5fd7cd76280660905ba 373 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 218 240 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CJD35_RS01635 449adc9eeffef5fd7cd76280660905ba 373 Pfam PF01066 CDP-alcohol phosphatidyltransferase 176 240 9.5E-10 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CJD35_RS07180 c18829f35e8632eddfcdeac210d38d88 311 Pfam PF03631 Virulence factor BrkB 46 299 8.3E-41 T 28-03-2018 IPR017039 Virulence factor BrkB CJD35_RS07180 c18829f35e8632eddfcdeac210d38d88 311 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 46 300 2.0E-23 T 28-03-2018 IPR017039 Virulence factor BrkB CJD35_RS07180 c18829f35e8632eddfcdeac210d38d88 311 Gene3D G3DSA:1.20.1250.20 146 308 6.6E-4 T 28-03-2018 CJD35_RS07180 c18829f35e8632eddfcdeac210d38d88 311 PIRSF PIRSF035875 19 309 1.7E-58 T 28-03-2018 IPR017039 Virulence factor BrkB CJD35_RS15505 eb0484846e9010a928c0ad690afb91b3 793 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 158 9.1E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15505 eb0484846e9010a928c0ad690afb91b3 793 Gene3D G3DSA:2.40.170.20 168 793 4.0E-64 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15505 eb0484846e9010a928c0ad690afb91b3 793 Gene3D G3DSA:2.170.130.10 29 167 1.2E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15505 eb0484846e9010a928c0ad690afb91b3 793 Pfam PF00593 TonB dependent receptor 296 792 6.7E-39 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15505 eb0484846e9010a928c0ad690afb91b3 793 SUPERFAMILY SSF56935 29 531 1.17E-97 T 28-03-2018 CJD35_RS15505 eb0484846e9010a928c0ad690afb91b3 793 SUPERFAMILY SSF56935 558 793 1.17E-97 T 28-03-2018 CJD35_RS15505 eb0484846e9010a928c0ad690afb91b3 793 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 776 793 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CJD35_RS00990 f4564833757ef5d0a5c8f7d2e2ad6026 242 Pfam PF04402 Protein of unknown function (DUF541) 34 236 4.8E-46 T 28-03-2018 IPR007497 Protein of unknown function DUF541 CJD35_RS17115 ce033bdf2e225192d3c6df7185ab3ab3 326 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 286 1.3E-59 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CJD35_RS17115 ce033bdf2e225192d3c6df7185ab3ab3 326 SUPERFAMILY SSF52283 12 138 1.21E-24 T 28-03-2018 CJD35_RS17115 ce033bdf2e225192d3c6df7185ab3ab3 326 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJD35_RS17115 ce033bdf2e225192d3c6df7185ab3ab3 326 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 313 5.3E-21 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CJD35_RS17115 ce033bdf2e225192d3c6df7185ab3ab3 326 Gene3D G3DSA:3.40.50.720 5 117 3.6E-25 T 28-03-2018 CJD35_RS17115 ce033bdf2e225192d3c6df7185ab3ab3 326 Gene3D G3DSA:3.40.50.720 118 287 1.5E-56 T 28-03-2018 CJD35_RS17115 ce033bdf2e225192d3c6df7185ab3ab3 326 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CJD35_RS17115 ce033bdf2e225192d3c6df7185ab3ab3 326 SUPERFAMILY SSF51735 105 287 7.73E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 Gene3D G3DSA:3.30.450.20 189 329 6.2E-17 T 28-03-2018 CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 SMART SM00267 321 493 1.8E-59 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 SUPERFAMILY SSF55785 217 323 7.33E-11 T 28-03-2018 IPR000014 PAS domain CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 330 489 1.1E-37 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 SUPERFAMILY SSF141371 770 840 4.9E-6 T 28-03-2018 CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 Gene3D G3DSA:3.20.20.450 501 757 1.5E-100 T 28-03-2018 IPR001633 EAL domain CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 SMART SM00052 503 746 4.0E-119 T 28-03-2018 IPR001633 EAL domain CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 Gene3D G3DSA:2.40.10.220 764 845 3.9E-6 T 28-03-2018 CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 SUPERFAMILY SSF55073 337 495 2.67E-47 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 Pfam PF00563 EAL domain 509 741 1.3E-72 T 28-03-2018 IPR001633 EAL domain CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 Pfam PF07238 PilZ domain 772 838 2.6E-5 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 Gene3D G3DSA:3.30.70.270 330 500 1.5E-58 T 28-03-2018 CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 SUPERFAMILY SSF141868 508 749 3.4E-89 T 28-03-2018 IPR001633 EAL domain CJD35_RS04165 0794e16cfe1ad30d0349bab94cc970cf 856 Pfam PF00990 Diguanylate cyclase, GGDEF domain 332 487 6.8E-45 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS17900 7b83572786143caf8824ca119f3a92a3 275 Pfam PF01841 Transglutaminase-like superfamily 127 224 1.8E-20 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS17900 7b83572786143caf8824ca119f3a92a3 275 SMART SM00460 161 227 2.3E-13 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS17900 7b83572786143caf8824ca119f3a92a3 275 SUPERFAMILY SSF54001 52 257 3.08E-34 T 28-03-2018 CJD35_RS17900 7b83572786143caf8824ca119f3a92a3 275 Gene3D G3DSA:3.90.260.10 144 232 2.4E-9 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS08005 a954e58509137013ad13bcb2b4a5c725 313 SUPERFAMILY SSF53850 90 299 9.41E-33 T 28-03-2018 CJD35_RS08005 a954e58509137013ad13bcb2b4a5c725 313 Gene3D G3DSA:3.40.190.10 92 174 1.4E-9 T 28-03-2018 CJD35_RS08005 a954e58509137013ad13bcb2b4a5c725 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 2.9E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS08005 a954e58509137013ad13bcb2b4a5c725 313 Gene3D G3DSA:1.10.10.10 1 84 2.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS08005 a954e58509137013ad13bcb2b4a5c725 313 Gene3D G3DSA:3.40.190.10 175 265 3.7E-25 T 28-03-2018 CJD35_RS08005 a954e58509137013ad13bcb2b4a5c725 313 Pfam PF03466 LysR substrate binding domain 89 294 4.1E-31 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS08005 a954e58509137013ad13bcb2b4a5c725 313 SUPERFAMILY SSF46785 5 111 8.24E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS18570 049028989fea214d95d0ef83dd036154 267 Pfam PF06586 TraK protein 34 260 3.7E-57 T 28-03-2018 IPR010563 Pilus assembly TraK CJD35_RS16355 d57e4990479825a32fa834eda808f4c0 413 Pfam PF03781 Sulfatase-modifying factor enzyme 1 180 310 3.0E-21 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 CJD35_RS16355 d57e4990479825a32fa834eda808f4c0 413 Pfam PF03781 Sulfatase-modifying factor enzyme 1 337 410 1.1E-6 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 CJD35_RS16355 d57e4990479825a32fa834eda808f4c0 413 Gene3D G3DSA:1.20.120.450 3 147 3.0E-7 T 28-03-2018 CJD35_RS16355 d57e4990479825a32fa834eda808f4c0 413 SUPERFAMILY SSF109854 10 125 3.36E-5 T 28-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CJD35_RS16355 d57e4990479825a32fa834eda808f4c0 413 Pfam PF12867 DinB superfamily 9 137 5.6E-9 T 28-03-2018 IPR024775 DinB-like domain CJD35_RS16355 d57e4990479825a32fa834eda808f4c0 413 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 5 409 7.9E-164 T 28-03-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 CJD35_RS16355 d57e4990479825a32fa834eda808f4c0 413 SUPERFAMILY SSF56436 171 411 3.77E-63 T 28-03-2018 IPR016187 C-type lectin fold CJD35_RS16355 d57e4990479825a32fa834eda808f4c0 413 Gene3D G3DSA:3.90.1580.10 335 413 1.3E-16 T 28-03-2018 CJD35_RS16355 d57e4990479825a32fa834eda808f4c0 413 Gene3D G3DSA:3.90.1580.10 158 333 8.5E-33 T 28-03-2018 CJD35_RS22305 01bae0144d7d37255bc18813175df349 260 Pfam PF01061 ABC-2 type transporter 14 222 5.4E-13 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CJD35_RS22305 01bae0144d7d37255bc18813175df349 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 34 55 5.5E-24 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJD35_RS22305 01bae0144d7d37255bc18813175df349 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 65 87 5.5E-24 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJD35_RS22305 01bae0144d7d37255bc18813175df349 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 142 166 5.5E-24 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJD35_RS22305 01bae0144d7d37255bc18813175df349 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 108 133 5.5E-24 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJD35_RS22305 01bae0144d7d37255bc18813175df349 260 PRINTS PR00164 ABC-2 type transport system membrane protein signature 199 218 5.5E-24 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJD35_RS05745 da4a40bc4968f6d300f573cb94e51ca0 289 Hamap MF_00469 UPF0176 protein YceA [yceA]. 16 272 41.707 T 28-03-2018 IPR020936 Uncharacterised protein family UPF0176 CJD35_RS05745 da4a40bc4968f6d300f573cb94e51ca0 289 SUPERFAMILY SSF52821 104 243 2.06E-23 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS05745 da4a40bc4968f6d300f573cb94e51ca0 289 SMART SM00450 127 232 1.4E-12 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS05745 da4a40bc4968f6d300f573cb94e51ca0 289 Gene3D G3DSA:3.40.250.10 121 238 1.3E-19 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS05675 d9c1e255612eeaa3adf051acc73b8661 274 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 272 29.151 T 28-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CJD35_RS05675 d9c1e255612eeaa3adf051acc73b8661 274 Gene3D G3DSA:3.40.50.720 117 269 4.6E-29 T 28-03-2018 CJD35_RS05675 d9c1e255612eeaa3adf051acc73b8661 274 SUPERFAMILY SSF51735 107 264 3.08E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS05675 d9c1e255612eeaa3adf051acc73b8661 274 Gene3D G3DSA:3.40.50.10860 1 116 1.7E-30 T 28-03-2018 CJD35_RS05675 d9c1e255612eeaa3adf051acc73b8661 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 93 8.2E-22 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CJD35_RS05675 d9c1e255612eeaa3adf051acc73b8661 274 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 9 258 6.8E-62 T 28-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CJD35_RS05675 d9c1e255612eeaa3adf051acc73b8661 274 SUPERFAMILY SSF53223 8 106 4.37E-25 T 28-03-2018 CJD35_RS06595 87c85fa31b6157c731764311995aa41d 425 Pfam PF02397 Bacterial sugar transferase 232 420 4.9E-63 T 28-03-2018 IPR003362 Bacterial sugar transferase CJD35_RS06595 87c85fa31b6157c731764311995aa41d 425 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 17 425 1.3E-92 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CJD35_RS20305 203d2d48f56b542b5e884e86ee2c9cf5 466 Pfam PF02417 Chromate transporter 261 452 5.8E-33 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CJD35_RS20305 203d2d48f56b542b5e884e86ee2c9cf5 466 Pfam PF02417 Chromate transporter 22 184 4.3E-31 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CJD35_RS20305 203d2d48f56b542b5e884e86ee2c9cf5 466 TIGRFAM TIGR00937 2A51: chromate efflux transporter 27 402 9.1E-64 T 28-03-2018 IPR014047 Chromate transporter, long chain CJD35_RS20305 203d2d48f56b542b5e884e86ee2c9cf5 466 PIRSF PIRSF004810 5 463 4.8E-129 T 28-03-2018 IPR014047 Chromate transporter, long chain CJD35_RS19125 203d2d48f56b542b5e884e86ee2c9cf5 466 Pfam PF02417 Chromate transporter 261 452 5.8E-33 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CJD35_RS19125 203d2d48f56b542b5e884e86ee2c9cf5 466 Pfam PF02417 Chromate transporter 22 184 4.3E-31 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CJD35_RS19125 203d2d48f56b542b5e884e86ee2c9cf5 466 TIGRFAM TIGR00937 2A51: chromate efflux transporter 27 402 9.1E-64 T 28-03-2018 IPR014047 Chromate transporter, long chain CJD35_RS19125 203d2d48f56b542b5e884e86ee2c9cf5 466 PIRSF PIRSF004810 5 463 4.8E-129 T 28-03-2018 IPR014047 Chromate transporter, long chain CJD35_RS06225 59f247610ab223727576bbad44023afe 250 Gene3D G3DSA:1.10.357.10 105 248 7.7E-16 T 28-03-2018 CJD35_RS06225 59f247610ab223727576bbad44023afe 250 Pfam PF08359 YsiA-like protein, C-terminal region 112 234 1.3E-5 T 28-03-2018 IPR013570 Transcription regulator YsiA, C-terminal CJD35_RS06225 59f247610ab223727576bbad44023afe 250 SUPERFAMILY SSF48498 129 243 3.71E-14 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS06225 59f247610ab223727576bbad44023afe 250 Pfam PF00440 Bacterial regulatory proteins, tetR family 62 105 6.8E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS06225 59f247610ab223727576bbad44023afe 250 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 83 106 5.1E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS06225 59f247610ab223727576bbad44023afe 250 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 62 75 5.1E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS06225 59f247610ab223727576bbad44023afe 250 SUPERFAMILY SSF46689 50 133 6.14E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS06225 59f247610ab223727576bbad44023afe 250 Gene3D G3DSA:1.10.10.60 40 104 2.3E-19 T 28-03-2018 CJD35_RS04810 e53c73b01207b9ef42cff7c21b3e9b98 315 Pfam PF01757 Acyltransferase family 1 278 1.5E-15 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CJD35_RS04630 81ea6cdca5d0ffcf54e5f7b545e972a3 363 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CJD35_RS04630 81ea6cdca5d0ffcf54e5f7b545e972a3 363 SUPERFAMILY SSF75620 12 356 1.03E-122 T 28-03-2018 CJD35_RS04630 81ea6cdca5d0ffcf54e5f7b545e972a3 363 Gene3D G3DSA:1.20.58.410 1 103 2.7E-8 T 28-03-2018 CJD35_RS04630 81ea6cdca5d0ffcf54e5f7b545e972a3 363 Pfam PF03462 PCRF domain 12 206 2.0E-63 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 CJD35_RS04630 81ea6cdca5d0ffcf54e5f7b545e972a3 363 SMART SM00937 66 181 6.8E-57 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 CJD35_RS04630 81ea6cdca5d0ffcf54e5f7b545e972a3 363 Gene3D G3DSA:3.30.160.20 211 293 2.2E-32 T 28-03-2018 CJD35_RS04630 81ea6cdca5d0ffcf54e5f7b545e972a3 363 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 4 360 38.771 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CJD35_RS04630 81ea6cdca5d0ffcf54e5f7b545e972a3 363 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 6 359 9.5E-146 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CJD35_RS04630 81ea6cdca5d0ffcf54e5f7b545e972a3 363 Pfam PF00472 RF-1 domain 214 323 7.5E-41 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CJD35_RS12310 109464d63930cd93d91b38be57a83471 441 Gene3D G3DSA:1.20.1250.20 225 421 1.3E-15 T 28-03-2018 CJD35_RS12310 109464d63930cd93d91b38be57a83471 441 Pfam PF07690 Major Facilitator Superfamily 27 271 1.7E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS12310 109464d63930cd93d91b38be57a83471 441 SUPERFAMILY SSF103473 23 420 3.53E-34 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS12310 109464d63930cd93d91b38be57a83471 441 Gene3D G3DSA:1.20.1250.20 10 218 2.3E-16 T 28-03-2018 CJD35_RS12715 246f62199c68828a083eb10e6d1ac4e8 421 Gene3D G3DSA:3.40.50.150 142 419 3.1E-58 T 28-03-2018 CJD35_RS12715 246f62199c68828a083eb10e6d1ac4e8 421 PIRSF PIRSF003085 30 421 2.4E-109 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CJD35_RS12715 246f62199c68828a083eb10e6d1ac4e8 421 Pfam PF02353 Mycolic acid cyclopropane synthetase 147 415 6.7E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS12715 246f62199c68828a083eb10e6d1ac4e8 421 SUPERFAMILY SSF53335 156 420 1.52E-70 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 Gene3D G3DSA:3.50.50.60 2 150 3.5E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 SUPERFAMILY SSF51905 6 371 4.97E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 Gene3D G3DSA:3.50.50.60 151 272 4.7E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 4.7E-69 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 4.7E-69 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 4.7E-69 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 4.7E-69 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 4.7E-69 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 4.7E-69 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 4.7E-69 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 442 4.7E-69 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 4.7E-69 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 TIGRFAM TIGR01424 gluta_reduc_2: glutathione-disulfide reductase 4 447 3.7E-186 T 28-03-2018 IPR006324 Glutathione-disulphide reductase GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 445 1.1E-33 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 SUPERFAMILY SSF55424 335 447 1.51E-35 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 Gene3D G3DSA:3.50.50.60 273 326 1.4E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 319 2.3E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 Gene3D G3DSA:3.30.390.30 327 448 8.8E-38 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 4.6E-28 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.6E-28 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 4.6E-28 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 4.6E-28 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 4.6E-28 T 28-03-2018 CJD35_RS12940 c63eb98e3b033abdf72b4f18ec0da006 448 PIRSF PIRSF000350 1 448 2.1E-91 T 28-03-2018 CJD35_RS02435 9dee7ff48a84cbf09587eb52805f3264 408 TIGRFAM TIGR04063 stp3: PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family 3 398 7.4E-194 T 28-03-2018 IPR024004 Glycosyltransferase family 1, Daro2409 family CJD35_RS02435 9dee7ff48a84cbf09587eb52805f3264 408 SUPERFAMILY SSF53756 1 400 4.71E-73 T 28-03-2018 CJD35_RS02435 9dee7ff48a84cbf09587eb52805f3264 408 Gene3D G3DSA:3.40.50.2000 205 379 1.7E-38 T 28-03-2018 CJD35_RS02435 9dee7ff48a84cbf09587eb52805f3264 408 Gene3D G3DSA:3.40.50.2000 3 204 2.4E-25 T 28-03-2018 CJD35_RS02435 9dee7ff48a84cbf09587eb52805f3264 408 Pfam PF13579 Glycosyl transferase 4-like domain 16 190 2.5E-26 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS02435 9dee7ff48a84cbf09587eb52805f3264 408 Pfam PF00534 Glycosyl transferases group 1 212 373 5.0E-27 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS17955 9bb2b4fccf8fcdc84c5b9900fd16d4b6 289 PIRSF PIRSF006493 1 289 2.3E-87 T 28-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type CJD35_RS17955 9bb2b4fccf8fcdc84c5b9900fd16d4b6 289 SMART SM00559 54 187 1.2E-21 T 28-03-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 CJD35_RS17955 9bb2b4fccf8fcdc84c5b9900fd16d4b6 289 Gene3D G3DSA:2.40.290.10 3 179 2.1E-29 T 28-03-2018 IPR016194 SPOC-like, C-terminal domain CJD35_RS17955 9bb2b4fccf8fcdc84c5b9900fd16d4b6 289 Pfam PF02735 Ku70/Ku80 beta-barrel domain 15 174 6.8E-34 T 28-03-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 CJD35_RS17955 9bb2b4fccf8fcdc84c5b9900fd16d4b6 289 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 3 262 29.921 T 28-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type CJD35_RS17955 9bb2b4fccf8fcdc84c5b9900fd16d4b6 289 SUPERFAMILY SSF100939 4 264 4.71E-45 T 28-03-2018 IPR016194 SPOC-like, C-terminal domain CJD35_RS17955 9bb2b4fccf8fcdc84c5b9900fd16d4b6 289 TIGRFAM TIGR02772 Ku_bact: Ku protein 3 263 3.9E-86 T 28-03-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type CJD35_RS01160 3fe95f3aa2ae5c2bb230c5cbd27dd74c 224 Pfam PF08445 FR47-like protein 134 214 4.8E-17 T 28-03-2018 IPR013653 FR47-like GO:0016747 CJD35_RS01160 3fe95f3aa2ae5c2bb230c5cbd27dd74c 224 Gene3D G3DSA:3.40.630.30 5 224 6.8E-19 T 28-03-2018 CJD35_RS01160 3fe95f3aa2ae5c2bb230c5cbd27dd74c 224 SUPERFAMILY SSF55729 93 219 2.7E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS12855 5c4e6ac009beccd1beb18df836dd283f 401 Gene3D G3DSA:3.30.360.10 157 322 2.4E-62 T 28-03-2018 CJD35_RS12855 5c4e6ac009beccd1beb18df836dd283f 401 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 137 1.2E-32 T 28-03-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 CJD35_RS12855 5c4e6ac009beccd1beb18df836dd283f 401 SUPERFAMILY SSF51735 3 153 2.06E-13 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS12855 5c4e6ac009beccd1beb18df836dd283f 401 Gene3D G3DSA:3.40.50.720 1 156 6.7E-50 T 28-03-2018 CJD35_RS12855 5c4e6ac009beccd1beb18df836dd283f 401 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 141 388 2.7E-36 T 28-03-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 CJD35_RS12855 5c4e6ac009beccd1beb18df836dd283f 401 Gene3D G3DSA:3.40.50.720 323 399 2.3E-10 T 28-03-2018 CJD35_RS01850 722e02e663ae7940942233bf19e474f6 103 Pfam PF05521 Phage head-tail joining protein 8 98 9.1E-17 T 28-03-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor CJD35_RS01850 722e02e663ae7940942233bf19e474f6 103 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 6 99 2.7E-7 T 28-03-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor CJD35_RS11535 eb4620ab571127a9e782bda118821c6e 602 SUPERFAMILY SSF110849 32 131 2.09E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS11535 eb4620ab571127a9e782bda118821c6e 602 Pfam PF02195 ParB-like nuclease domain 32 129 2.6E-10 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS11535 eb4620ab571127a9e782bda118821c6e 602 Gene3D G3DSA:3.90.1530.10 20 130 1.0E-13 T 28-03-2018 CJD35_RS11535 eb4620ab571127a9e782bda118821c6e 602 Gene3D G3DSA:1.10.10.730 131 178 3.0E-8 T 28-03-2018 CJD35_RS11535 eb4620ab571127a9e782bda118821c6e 602 SMART SM00470 31 130 3.6E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS11535 eb4620ab571127a9e782bda118821c6e 602 SUPERFAMILY SSF109709 123 222 8.37E-21 T 28-03-2018 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 3.4E-89 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 SUPERFAMILY SSF51569 1 287 7.22E-96 T 28-03-2018 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 1.0E-78 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 102 118 2.2E-28 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 2.2E-28 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 70 88 2.2E-28 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 127 144 2.2E-28 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 132 163 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 SMART SM01130 1 290 2.5E-132 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 37 54 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 PIRSF PIRSF001365 1 291 2.4E-88 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 61.063 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS02880 adf5dd0e9bb990df5e247d6603b6372a 292 Gene3D G3DSA:3.20.20.70 1 292 9.5E-93 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS20205 9c9b2a0fc83ff7c584476f60fe180ea6 267 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 139 153 3.8E-6 T 28-03-2018 CJD35_RS20205 9c9b2a0fc83ff7c584476f60fe180ea6 267 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 104 120 3.8E-6 T 28-03-2018 CJD35_RS20205 9c9b2a0fc83ff7c584476f60fe180ea6 267 Pfam PF02384 N-6 DNA Methylase 99 207 2.8E-7 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CJD35_RS20205 9c9b2a0fc83ff7c584476f60fe180ea6 267 SUPERFAMILY SSF53335 74 206 5.01E-19 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS20205 9c9b2a0fc83ff7c584476f60fe180ea6 267 Gene3D G3DSA:3.40.50.150 102 239 1.1E-13 T 28-03-2018 CJD35_RS15215 915047899644843b5ccaaacbb56f18b4 288 Gene3D G3DSA:3.90.550.10 3 248 1.1E-29 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS15215 915047899644843b5ccaaacbb56f18b4 288 SUPERFAMILY SSF53448 5 122 2.04E-36 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS15215 915047899644843b5ccaaacbb56f18b4 288 SUPERFAMILY SSF53448 156 252 2.04E-36 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS15215 915047899644843b5ccaaacbb56f18b4 288 Pfam PF02709 N-terminal domain of galactosyltransferase 166 206 3.2E-7 T 28-03-2018 IPR027791 Galactosyltransferase, C-terminal Reactome: R-HSA-2022854|Reactome: R-HSA-975577 CJD35_RS15215 915047899644843b5ccaaacbb56f18b4 288 Pfam PF00535 Glycosyl transferase family 2 9 132 3.9E-15 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 Pfam PF12705 PD-(D/E)XK nuclease superfamily 954 1105 1.9E-7 T 28-03-2018 CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 Gene3D G3DSA:3.90.320.10 825 1105 4.4E-13 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 Gene3D G3DSA:1.10.486.10 612 766 1.2E-15 T 28-03-2018 CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 SUPERFAMILY SSF52540 117 170 4.0E-102 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 SUPERFAMILY SSF52540 341 795 4.0E-102 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 SUPERFAMILY SSF52540 5 78 4.0E-102 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 SUPERFAMILY SSF52540 833 864 4.0E-102 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 Pfam PF00580 UvrD/REP helicase N-terminal domain 19 173 1.6E-27 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 Pfam PF00580 UvrD/REP helicase N-terminal domain 351 460 9.5E-23 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 Gene3D G3DSA:3.40.50.300 8 469 1.2E-47 T 28-03-2018 CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 TIGRFAM TIGR02784 addA_alphas: double-strand break repair helicase AddA 15 1112 0.0 T 28-03-2018 IPR014151 DNA helicase, AddA type CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 SUPERFAMILY SSF52980 950 1092 5.9E-5 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 Gene3D G3DSA:3.40.50.300 480 611 9.5E-11 T 28-03-2018 CJD35_RS13120 01210c22306e15362c8d1647a263c286 1133 Pfam PF13361 UvrD-like helicase C-terminal domain 766 855 2.5E-8 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.1E-41 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 SUPERFAMILY SSF52440 2 114 7.19E-50 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 SMART SM00878 336 441 1.8E-67 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 SUPERFAMILY SSF51246 332 444 7.32E-45 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 Gene3D G3DSA:3.30.1490.20 138 204 3.6E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 3.0E-80 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 3 443 5.6E-219 T 28-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 SUPERFAMILY SSF56059 84 350 5.13E-74 T 28-03-2018 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 111 1.3E-46 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 Gene3D G3DSA:3.40.50.20 2 132 1.5E-52 T 28-03-2018 CJD35_RS09020 40f47991ee2ee04032a2f0c3cc62ae89 448 Gene3D G3DSA:3.30.470.20 205 444 1.3E-99 T 28-03-2018 CJD35_RS04940 e2ed8bcdd500322a85d4367734c0fb18 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 1.2E-14 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS04940 e2ed8bcdd500322a85d4367734c0fb18 144 Gene3D G3DSA:3.10.180.10 2 128 1.8E-29 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS04940 e2ed8bcdd500322a85d4367734c0fb18 144 SUPERFAMILY SSF54593 4 130 1.06E-30 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS02780 d1817b4c701cb8d296ee7ed077bc463f 260 SUPERFAMILY SSF51735 2 248 1.13E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS02780 d1817b4c701cb8d296ee7ed077bc463f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.3E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02780 d1817b4c701cb8d296ee7ed077bc463f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.3E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02780 d1817b4c701cb8d296ee7ed077bc463f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.3E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02780 d1817b4c701cb8d296ee7ed077bc463f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.3E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02780 d1817b4c701cb8d296ee7ed077bc463f 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 2.3E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS02780 d1817b4c701cb8d296ee7ed077bc463f 260 Gene3D G3DSA:3.40.50.720 3 227 2.3E-41 T 28-03-2018 CJD35_RS02780 d1817b4c701cb8d296ee7ed077bc463f 260 Pfam PF00106 short chain dehydrogenase 4 188 5.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17555 940b21ecc9647bf7db6552f03c5435ae 222 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 14 216 1.2E-41 T 28-03-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 CJD35_RS17555 940b21ecc9647bf7db6552f03c5435ae 222 SUPERFAMILY SSF48613 2 215 1.08E-66 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CJD35_RS17555 940b21ecc9647bf7db6552f03c5435ae 222 Gene3D G3DSA:1.20.910.10 2 222 1.4E-61 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CJD35_RS17555 940b21ecc9647bf7db6552f03c5435ae 222 Pfam PF03070 TENA/THI-4/PQQC family 10 216 8.2E-46 T 28-03-2018 IPR004305 Thiaminase-2/PQQC CJD35_RS05620 0d9a45dfb00b4b163fd2075def869767 299 SUPERFAMILY SSF103481 43 143 9.68E-12 T 28-03-2018 CJD35_RS05620 0d9a45dfb00b4b163fd2075def869767 299 SUPERFAMILY SSF103481 191 288 1.15E-9 T 28-03-2018 CJD35_RS05620 0d9a45dfb00b4b163fd2075def869767 299 Pfam PF00892 EamA-like transporter family 15 140 1.2E-9 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS05620 0d9a45dfb00b4b163fd2075def869767 299 Pfam PF00892 EamA-like transporter family 154 283 2.1E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS03455 96da178919a01878787caf34f60a1369 227 Pfam PF00753 Metallo-beta-lactamase superfamily 23 205 8.6E-24 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS03455 96da178919a01878787caf34f60a1369 227 SUPERFAMILY SSF56281 15 221 2.17E-50 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS03455 96da178919a01878787caf34f60a1369 227 SMART SM00849 26 205 4.5E-30 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS03455 96da178919a01878787caf34f60a1369 227 Gene3D G3DSA:3.60.15.10 15 225 2.2E-36 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS13145 24be49268ec7872c5fd9d37012020b56 121 Gene3D G3DSA:2.40.10.220 6 92 5.0E-7 T 28-03-2018 CJD35_RS13145 24be49268ec7872c5fd9d37012020b56 121 SUPERFAMILY SSF141371 10 83 3.73E-9 T 28-03-2018 CJD35_RS05670 d730904ef3d3d8006bf5fe85dd65954c 197 Hamap MF_00528 Septum formation protein Maf [maf]. 1 196 22.231 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CJD35_RS05670 d730904ef3d3d8006bf5fe85dd65954c 197 SUPERFAMILY SSF52972 1 190 2.03E-44 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CJD35_RS05670 d730904ef3d3d8006bf5fe85dd65954c 197 PIRSF PIRSF006305 1 194 6.3E-33 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CJD35_RS05670 d730904ef3d3d8006bf5fe85dd65954c 197 Gene3D G3DSA:3.90.950.10 1 196 3.9E-45 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CJD35_RS05670 d730904ef3d3d8006bf5fe85dd65954c 197 Pfam PF02545 Maf-like protein 2 190 1.2E-36 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CJD35_RS04300 dc2770b4c4fe3e7034cc0f447bf63a1f 176 Gene3D G3DSA:3.40.50.620 26 151 1.5E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS04300 dc2770b4c4fe3e7034cc0f447bf63a1f 176 ProDom PD207074 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED RC1356 RP875 2 167 7.0E-9 T 28-03-2018 CJD35_RS04300 dc2770b4c4fe3e7034cc0f447bf63a1f 176 Pfam PF02698 DUF218 domain 34 162 7.8E-15 T 28-03-2018 IPR003848 Domain of unknown function DUF218 CJD35_RS06170 557832572a32330c2ee743502fcc16f7 134 Pfam PF05610 Protein of unknown function (DUF779) 18 112 1.3E-47 T 28-03-2018 IPR008497 Protein of unknown function DUF779 CJD35_RS06170 557832572a32330c2ee743502fcc16f7 134 PIRSF PIRSF009151 1 126 1.0E-59 T 28-03-2018 IPR008497 Protein of unknown function DUF779 CJD35_RS06045 8f890826f7ce984fd4bccb57561a9191 495 SUPERFAMILY SSF101960 44 492 1.57E-140 T 28-03-2018 CJD35_RS06045 8f890826f7ce984fd4bccb57561a9191 495 Pfam PF01458 Uncharacterized protein family (UPF0051) 233 466 1.7E-71 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CJD35_RS06045 8f890826f7ce984fd4bccb57561a9191 495 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 24 486 6.0E-192 T 28-03-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 CJD35_RS20470 eef20f429287af2b80a9e77c4fc5b9e7 200 Gene3D G3DSA:1.10.10.60 1 33 4.5E-10 T 28-03-2018 CJD35_RS20470 eef20f429287af2b80a9e77c4fc5b9e7 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 47 1.3E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS20470 eef20f429287af2b80a9e77c4fc5b9e7 200 Gene3D G3DSA:1.10.10.60 34 157 7.0E-4 T 28-03-2018 CJD35_RS20470 eef20f429287af2b80a9e77c4fc5b9e7 200 SUPERFAMILY SSF46689 2 64 2.36E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS03985 50ca7ff819c1fefc9ca5406c9fc0a6fd 220 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 150 171 - T 28-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CJD35_RS03985 50ca7ff819c1fefc9ca5406c9fc0a6fd 220 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 215 48.808 T 28-03-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CJD35_RS03985 50ca7ff819c1fefc9ca5406c9fc0a6fd 220 Gene3D G3DSA:3.40.190.10 1 109 9.1E-30 T 28-03-2018 CJD35_RS03985 50ca7ff819c1fefc9ca5406c9fc0a6fd 220 SUPERFAMILY SSF53850 4 214 1.98E-63 T 28-03-2018 CJD35_RS03985 50ca7ff819c1fefc9ca5406c9fc0a6fd 220 Gene3D G3DSA:3.40.190.10 110 183 2.3E-27 T 28-03-2018 CJD35_RS03985 50ca7ff819c1fefc9ca5406c9fc0a6fd 220 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 191 6.3E-58 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CJD35_RS03985 50ca7ff819c1fefc9ca5406c9fc0a6fd 220 Pfam PF01634 ATP phosphoribosyltransferase 56 210 1.2E-45 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CJD35_RS09565 64d076fac73c3cbdceb6e9e9d35c9a19 397 Pfam PF04860 Phage portal protein 48 375 4.1E-82 T 28-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein CJD35_RS09565 64d076fac73c3cbdceb6e9e9d35c9a19 397 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 41 380 3.9E-69 T 28-03-2018 IPR006427 Phage portal protein, HK97 CJD35_RS08020 69670da5c3f0cfd79734c882cf1979f4 289 Gene3D G3DSA:3.40.630.30 3 140 2.2E-21 T 28-03-2018 CJD35_RS08020 69670da5c3f0cfd79734c882cf1979f4 289 Gene3D G3DSA:3.40.630.30 141 231 1.7E-5 T 28-03-2018 CJD35_RS08020 69670da5c3f0cfd79734c882cf1979f4 289 SUPERFAMILY SSF55729 13 268 2.0E-34 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS08020 69670da5c3f0cfd79734c882cf1979f4 289 Pfam PF13508 Acetyltransferase (GNAT) domain 51 127 1.3E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS09965 6dd39eec27adb4288934895e3e86fcf8 403 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 6 359 2.4E-70 T 28-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CJD35_RS09965 6dd39eec27adb4288934895e3e86fcf8 403 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 360 5.0E-57 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CJD35_RS05975 8c6c091d86e7b4fde44b7d6b1f3a9a4b 615 Pfam PF05170 AsmA family 1 131 9.9E-8 T 28-03-2018 IPR007844 AsmA CJD35_RS05975 8c6c091d86e7b4fde44b7d6b1f3a9a4b 615 Pfam PF13502 AsmA-like C-terminal region 376 561 3.7E-11 T 28-03-2018 IPR032712 AsmA-like, C-terminal CJD35_RS04010 4cc9a788c429c75be8bef573fa4309f4 652 Gene3D G3DSA:3.40.50.1820 382 650 1.2E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS04010 4cc9a788c429c75be8bef573fa4309f4 652 SUPERFAMILY SSF53474 396 649 1.13E-64 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS04010 4cc9a788c429c75be8bef573fa4309f4 652 Gene3D G3DSA:2.130.10.120 46 381 1.0E-10 T 28-03-2018 CJD35_RS04010 4cc9a788c429c75be8bef573fa4309f4 652 SUPERFAMILY SSF82171 48 379 1.12E-6 T 28-03-2018 CJD35_RS04010 4cc9a788c429c75be8bef573fa4309f4 652 Pfam PF00326 Prolyl oligopeptidase family 443 649 1.3E-42 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CJD35_RS18785 3d6f9da0b83522d1799a1cf4fe663119 768 Pfam PF00534 Glycosyl transferases group 1 195 364 8.6E-16 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS18785 3d6f9da0b83522d1799a1cf4fe663119 768 Gene3D G3DSA:1.50.10.20 555 745 1.4E-14 T 28-03-2018 CJD35_RS18785 3d6f9da0b83522d1799a1cf4fe663119 768 SUPERFAMILY SSF48208 585 725 1.62E-8 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CJD35_RS18785 3d6f9da0b83522d1799a1cf4fe663119 768 SUPERFAMILY SSF53756 12 384 6.67E-50 T 28-03-2018 CJD35_RS18785 3d6f9da0b83522d1799a1cf4fe663119 768 Pfam PF13439 Glycosyltransferase Family 4 25 177 2.3E-13 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS18785 3d6f9da0b83522d1799a1cf4fe663119 768 Gene3D G3DSA:3.40.50.2000 22 192 6.8E-7 T 28-03-2018 CJD35_RS18785 3d6f9da0b83522d1799a1cf4fe663119 768 Gene3D G3DSA:1.50.10.10 415 554 1.6E-9 T 28-03-2018 CJD35_RS18785 3d6f9da0b83522d1799a1cf4fe663119 768 Gene3D G3DSA:3.40.50.2000 193 368 7.8E-31 T 28-03-2018 CJD35_RS18765 b03b3bf6bbe9808e25cfa1e9c3189048 66 SUPERFAMILY SSF50129 4 57 2.83E-15 T 28-03-2018 IPR011032 GroES-like CJD35_RS18765 b03b3bf6bbe9808e25cfa1e9c3189048 66 PRINTS PR00297 10kDa chaperonin signature 22 34 1.9E-9 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS18765 b03b3bf6bbe9808e25cfa1e9c3189048 66 PRINTS PR00297 10kDa chaperonin signature 43 56 1.9E-9 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS18765 b03b3bf6bbe9808e25cfa1e9c3189048 66 Gene3D G3DSA:2.30.33.40 3 57 1.7E-17 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS18765 b03b3bf6bbe9808e25cfa1e9c3189048 66 SMART SM00883 1 56 4.2E-6 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS18765 b03b3bf6bbe9808e25cfa1e9c3189048 66 Pfam PF00166 Chaperonin 10 Kd subunit 4 56 5.3E-15 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CJD35_RS14080 6906395a6bd196cb4b0e809f5e1bedaf 258 SUPERFAMILY SSF111331 22 244 1.3E-54 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CJD35_RS14080 6906395a6bd196cb4b0e809f5e1bedaf 258 Gene3D G3DSA:3.40.50.10330 10 117 9.9E-16 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CJD35_RS14080 6906395a6bd196cb4b0e809f5e1bedaf 258 Gene3D G3DSA:2.60.200.30 118 233 9.1E-26 T 28-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CJD35_RS14080 6906395a6bd196cb4b0e809f5e1bedaf 258 Hamap MF_00361 NAD kinase [nadK]. 5 257 20.57 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CJD35_RS14080 6906395a6bd196cb4b0e809f5e1bedaf 258 Pfam PF01513 ATP-NAD kinase 28 223 2.6E-19 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CJD35_RS17160 1332a3878d780b6d2f86d3a882521729 369 Gene3D G3DSA:2.115.10.20 1 214 3.0E-15 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CJD35_RS17160 1332a3878d780b6d2f86d3a882521729 369 Gene3D G3DSA:2.115.10.20 215 369 4.2E-40 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CJD35_RS17160 1332a3878d780b6d2f86d3a882521729 369 SUPERFAMILY SSF75005 5 367 9.71E-43 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CJD35_RS17160 1332a3878d780b6d2f86d3a882521729 369 Pfam PF02435 Levansucrase/Invertase 212 365 1.1E-31 T 28-03-2018 IPR003469 Glycoside hydrolase, family 68 GO:0009758|GO:0050053 CJD35_RS07690 398d5eacca66ccb75cfe7b6f31895bfb 504 Pfam PF02321 Outer membrane efflux protein 290 487 8.5E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS07690 398d5eacca66ccb75cfe7b6f31895bfb 504 Pfam PF02321 Outer membrane efflux protein 72 262 3.1E-15 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS07690 398d5eacca66ccb75cfe7b6f31895bfb 504 Gene3D G3DSA:1.20.1600.10 25 496 1.7E-89 T 28-03-2018 CJD35_RS07690 398d5eacca66ccb75cfe7b6f31895bfb 504 SUPERFAMILY SSF56954 9 491 7.46E-94 T 28-03-2018 CJD35_RS07690 398d5eacca66ccb75cfe7b6f31895bfb 504 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 18 490 4.0E-113 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CJD35_RS13620 6f186f55cd6592d407c96e43674036d4 239 Pfam PF07120 Protein of unknown function (DUF1376) 17 101 2.3E-13 T 28-03-2018 IPR010781 Protein of unknown function DUF1376 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 Gene3D G3DSA:2.40.50.140 1 114 2.9E-43 T 28-03-2018 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.5E-30 T 28-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 43.733 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 SMART SM01383 42 118 5.2E-42 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 PIRSF PIRSF002158 4 275 2.5E-97 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.4E-115 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 6.3E-55 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 SMART SM01382 124 252 9.9E-85 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 28-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 SUPERFAMILY SSF50104 126 272 3.43E-59 T 28-03-2018 IPR008991 Translation protein SH3-like domain CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 Gene3D G3DSA:4.10.950.10 197 273 3.1E-32 T 28-03-2018 IPR014726 Ribosomal protein L2, domain 3 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 Gene3D G3DSA:2.30.30.30 118 195 3.2E-32 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CJD35_RS08565 741058236dd88b499405eeb036ce99a8 278 SUPERFAMILY SSF50249 2 125 1.34E-43 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS15160 e297350add20d06cb6063d70737a1e47 439 Pfam PF12704 MacB-like periplasmic core domain 16 187 1.1E-12 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CJD35_RS15160 e297350add20d06cb6063d70737a1e47 439 Pfam PF02687 FtsX-like permease family 340 429 4.6E-10 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 288 57.07 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 285 7.7E-146 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.5E-65 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 248 264 4.5E-65 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.5E-65 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.5E-65 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.5E-65 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.5E-65 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 8 285 2.6E-140 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 SUPERFAMILY SSF55681 8 284 1.49E-128 T 28-03-2018 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 Gene3D G3DSA:3.30.930.10 1 211 1.1E-85 T 28-03-2018 CJD35_RS12630 3bc28cc3e6dac3297912894392d4e525 290 Gene3D G3DSA:1.20.58.180 213 287 4.9E-28 T 28-03-2018 CJD35_RS01985 d7e847524b4865ece8071e7b383d1d1d 450 Gene3D G3DSA:1.10.287.950 217 442 8.5E-42 T 28-03-2018 CJD35_RS01985 d7e847524b4865ece8071e7b383d1d1d 450 SMART SM00283 192 446 1.0E-36 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS01985 d7e847524b4865ece8071e7b383d1d1d 450 SUPERFAMILY SSF58104 198 445 6.93E-50 T 28-03-2018 CJD35_RS01985 d7e847524b4865ece8071e7b383d1d1d 450 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 213 242 7.0E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS01985 d7e847524b4865ece8071e7b383d1d1d 450 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 319 348 7.0E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS01985 d7e847524b4865ece8071e7b383d1d1d 450 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 317 7.0E-19 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS01985 d7e847524b4865ece8071e7b383d1d1d 450 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 256 418 4.9E-34 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS00600 9a8568d3a98b3f23be9555bde5830d5f 962 Gene3D G3DSA:3.30.830.10 308 504 6.6E-7 T 28-03-2018 CJD35_RS00600 9a8568d3a98b3f23be9555bde5830d5f 962 Gene3D G3DSA:3.30.830.10 769 962 1.6E-25 T 28-03-2018 CJD35_RS00600 9a8568d3a98b3f23be9555bde5830d5f 962 Gene3D G3DSA:3.30.830.10 51 278 1.5E-46 T 28-03-2018 CJD35_RS00600 9a8568d3a98b3f23be9555bde5830d5f 962 SUPERFAMILY SSF63411 527 755 4.37E-21 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJD35_RS00600 9a8568d3a98b3f23be9555bde5830d5f 962 SUPERFAMILY SSF63411 772 958 6.46E-21 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJD35_RS00600 9a8568d3a98b3f23be9555bde5830d5f 962 SUPERFAMILY SSF63411 61 272 7.7E-39 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CJD35_RS00600 9a8568d3a98b3f23be9555bde5830d5f 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 93 116 - T 28-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CJD35_RS00600 9a8568d3a98b3f23be9555bde5830d5f 962 Pfam PF00675 Insulinase (Peptidase family M16) 83 200 3.3E-20 T 28-03-2018 IPR011765 Peptidase M16, N-terminal CJD35_RS00600 9a8568d3a98b3f23be9555bde5830d5f 962 Gene3D G3DSA:3.30.830.10 534 758 3.0E-14 T 28-03-2018 CJD35_RS00600 9a8568d3a98b3f23be9555bde5830d5f 962 Pfam PF05193 Peptidase M16 inactive domain 234 411 5.6E-12 T 28-03-2018 IPR007863 Peptidase M16, C-terminal CJD35_RS00600 9a8568d3a98b3f23be9555bde5830d5f 962 Pfam PF05193 Peptidase M16 inactive domain 712 887 6.0E-12 T 28-03-2018 IPR007863 Peptidase M16, C-terminal CJD35_RS17185 7ebea40efc8e030af9f2f202e0cb0099 353 Gene3D G3DSA:1.10.287.470 107 170 1.6E-4 T 28-03-2018 CJD35_RS17185 7ebea40efc8e030af9f2f202e0cb0099 353 Gene3D G3DSA:2.40.50.100 46 96 3.0E-4 T 28-03-2018 CJD35_RS17185 7ebea40efc8e030af9f2f202e0cb0099 353 Pfam PF13437 HlyD family secretion protein 184 286 9.1E-11 T 28-03-2018 CJD35_RS17185 7ebea40efc8e030af9f2f202e0cb0099 353 Gene3D G3DSA:2.40.50.100 172 305 2.3E-5 T 28-03-2018 CJD35_RS17185 7ebea40efc8e030af9f2f202e0cb0099 353 Pfam PF13533 Biotin-lipoyl like 65 117 2.0E-5 T 28-03-2018 CJD35_RS17185 7ebea40efc8e030af9f2f202e0cb0099 353 SUPERFAMILY SSF111369 66 221 4.71E-11 T 28-03-2018 CJD35_RS00790 d91a6175c24bfad0cd42cc85455f3ee1 177 Gene3D G3DSA:3.40.50.2300 2 123 4.5E-23 T 28-03-2018 CJD35_RS00790 d91a6175c24bfad0cd42cc85455f3ee1 177 SUPERFAMILY SSF52172 6 119 6.26E-26 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS00790 d91a6175c24bfad0cd42cc85455f3ee1 177 SUPERFAMILY SSF46689 93 175 2.47E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS00790 d91a6175c24bfad0cd42cc85455f3ee1 177 Gene3D G3DSA:1.10.10.60 128 177 8.5E-14 T 28-03-2018 CJD35_RS00790 d91a6175c24bfad0cd42cc85455f3ee1 177 SMART SM00448 5 116 3.1E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS00790 d91a6175c24bfad0cd42cc85455f3ee1 177 Pfam PF00072 Response regulator receiver domain 8 115 6.8E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS00790 d91a6175c24bfad0cd42cc85455f3ee1 177 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 140 157 2.9E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS00790 d91a6175c24bfad0cd42cc85455f3ee1 177 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 157 177 2.9E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS00790 d91a6175c24bfad0cd42cc85455f3ee1 177 Pfam PF02954 Bacterial regulatory protein, Fis family 135 173 1.5E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS00210 88402e5cf702c7b43686c7221f141647 318 Pfam PF01300 Telomere recombination 26 202 8.5E-53 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 CJD35_RS00210 88402e5cf702c7b43686c7221f141647 318 Pfam PF03481 Putative GTP-binding controlling metal-binding 204 318 1.7E-19 T 28-03-2018 IPR005145 Putative GTP-binding controlling metal-binding domain CJD35_RS00210 88402e5cf702c7b43686c7221f141647 318 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 18 211 1.3E-51 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 CJD35_RS00210 88402e5cf702c7b43686c7221f141647 318 Gene3D G3DSA:3.90.870.10 6 216 7.2E-72 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CJD35_RS00210 88402e5cf702c7b43686c7221f141647 318 PIRSF PIRSF004930 6 318 6.1E-101 T 28-03-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CJD35_RS00210 88402e5cf702c7b43686c7221f141647 318 SUPERFAMILY SSF55821 10 211 2.87E-58 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CJD35_RS06900 1649b0fa14165380712c666b28d40de5 382 Gene3D G3DSA:3.40.47.10 2 212 1.9E-24 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06900 1649b0fa14165380712c666b28d40de5 382 SUPERFAMILY SSF53901 254 360 1.8E-22 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06900 1649b0fa14165380712c666b28d40de5 382 PIRSF PIRSF000429 1 382 5.8E-33 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS06900 1649b0fa14165380712c666b28d40de5 382 Pfam PF02803 Thiolase, C-terminal domain 258 351 1.0E-5 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CJD35_RS06900 1649b0fa14165380712c666b28d40de5 382 Gene3D G3DSA:3.40.47.10 213 378 4.4E-7 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06900 1649b0fa14165380712c666b28d40de5 382 SUPERFAMILY SSF53901 4 223 2.19E-33 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS13865 477071f64aecdbac611b42741ead07f9 468 Pfam PF00982 Glycosyltransferase family 20 17 451 4.2E-132 T 28-03-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 CJD35_RS13865 477071f64aecdbac611b42741ead07f9 468 Gene3D G3DSA:3.40.50.2000 239 437 2.4E-46 T 28-03-2018 CJD35_RS13865 477071f64aecdbac611b42741ead07f9 468 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 451 1.9E-172 T 28-03-2018 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 CJD35_RS13865 477071f64aecdbac611b42741ead07f9 468 SUPERFAMILY SSF53756 2 450 9.42E-144 T 28-03-2018 CJD35_RS13865 477071f64aecdbac611b42741ead07f9 468 Gene3D G3DSA:3.40.50.2000 1 238 1.8E-64 T 28-03-2018 CJD35_RS02885 82b6c86b5902beb56d32f44ed030cd57 695 Gene3D G3DSA:1.10.530.10 521 677 1.7E-35 T 28-03-2018 CJD35_RS02885 82b6c86b5902beb56d32f44ed030cd57 695 Gene3D G3DSA:1.25.20.10 55 428 4.3E-40 T 28-03-2018 CJD35_RS02885 82b6c86b5902beb56d32f44ed030cd57 695 SUPERFAMILY SSF53955 533 670 2.29E-43 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS02885 82b6c86b5902beb56d32f44ed030cd57 695 Pfam PF01464 Transglycosylase SLT domain 535 634 2.9E-26 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CJD35_RS02885 82b6c86b5902beb56d32f44ed030cd57 695 SUPERFAMILY SSF48435 62 511 1.7E-49 T 28-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 CJD35_RS02360 e950737d542425d36d9ecf7d511522e7 255 SUPERFAMILY SSF52833 86 247 1.37E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS02360 e950737d542425d36d9ecf7d511522e7 255 Pfam PF01323 DSBA-like thioredoxin domain 107 247 1.1E-24 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CJD35_RS02360 e950737d542425d36d9ecf7d511522e7 255 Gene3D G3DSA:3.40.30.10 83 255 1.0E-37 T 28-03-2018 CJD35_RS00380 ec7a0dbf762f4ca07c0759928b99c7c5 373 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 91 372 1.1E-43 T 28-03-2018 IPR006427 Phage portal protein, HK97 CJD35_RS00380 ec7a0dbf762f4ca07c0759928b99c7c5 373 Pfam PF04860 Phage portal protein 48 371 2.3E-60 T 28-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 Gene3D G3DSA:3.40.50.720 41 250 7.5E-61 T 28-03-2018 CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 Gene3D G3DSA:3.40.50.720 1 40 7.9E-11 T 28-03-2018 CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 1.0E-59 T 28-03-2018 CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 SUPERFAMILY SSF51735 4 246 1.15E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS06920 f1f33ec756341300791c61ad11869f92 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.8E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 SUPERFAMILY SSF103473 15 467 4.19E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 PRINTS PR00171 Sugar transporter signature 373 394 1.4E-27 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 PRINTS PR00171 Sugar transporter signature 25 35 1.4E-27 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 PRINTS PR00171 Sugar transporter signature 108 127 1.4E-27 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 PRINTS PR00171 Sugar transporter signature 276 286 1.4E-27 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 PRINTS PR00171 Sugar transporter signature 396 408 1.4E-27 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 Gene3D G3DSA:1.20.1250.20 242 470 2.3E-30 T 28-03-2018 CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 Gene3D G3DSA:1.20.1250.20 9 219 2.4E-30 T 28-03-2018 CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 Pfam PF00083 Sugar (and other) transporter 18 468 1.6E-107 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 9 468 3.8E-103 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CJD35_RS00065 cdbe2b6288c3fc1c8c99fc5a51306815 470 ProSitePatterns PS00216 Sugar transport proteins signature 1. 320 337 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CJD35_RS09755 53d710062cfdef6920a3118da3df312a 190 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 19 186 2.1E-37 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09755 53d710062cfdef6920a3118da3df312a 190 Gene3D G3DSA:1.10.520.20 14 119 6.7E-23 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09755 53d710062cfdef6920a3118da3df312a 190 PRINTS PR00125 ATP synthase delta subunit signature 148 163 1.6E-26 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09755 53d710062cfdef6920a3118da3df312a 190 PRINTS PR00125 ATP synthase delta subunit signature 163 181 1.6E-26 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09755 53d710062cfdef6920a3118da3df312a 190 PRINTS PR00125 ATP synthase delta subunit signature 17 36 1.6E-26 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09755 53d710062cfdef6920a3118da3df312a 190 PRINTS PR00125 ATP synthase delta subunit signature 87 98 1.6E-26 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09755 53d710062cfdef6920a3118da3df312a 190 PRINTS PR00125 ATP synthase delta subunit signature 98 112 1.6E-26 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09755 53d710062cfdef6920a3118da3df312a 190 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 150 169 - T 28-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09755 53d710062cfdef6920a3118da3df312a 190 Hamap MF_01416 ATP synthase subunit delta [atpD]. 13 190 19.335 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09755 53d710062cfdef6920a3118da3df312a 190 SUPERFAMILY SSF47928 16 118 2.62E-22 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS09755 53d710062cfdef6920a3118da3df312a 190 Pfam PF00213 ATP synthase delta (OSCP) subunit 18 187 3.3E-49 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 Gene3D G3DSA:3.40.120.10 299 400 3.2E-39 T 28-03-2018 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 293 406 1.1E-31 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 106 115 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 Gene3D G3DSA:3.40.120.10 1 185 5.3E-41 T 28-03-2018 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 240 253 1.7E-20 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 269 284 1.7E-20 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 204 223 1.7E-20 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 105 119 1.7E-20 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 SUPERFAMILY SSF53738 3 210 5.1E-49 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 458 501 9.5E-7 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 SUPERFAMILY SSF55957 408 542 6.1E-42 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 184 285 6.8E-12 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 SUPERFAMILY SSF53738 277 413 1.02E-35 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 SUPERFAMILY SSF53738 183 290 2.16E-27 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 Gene3D G3DSA:3.40.120.10 186 298 8.9E-29 T 28-03-2018 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 13 152 3.3E-34 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS12605 5a73d32e1f7b48ac5357577cca09ef67 542 Gene3D G3DSA:3.30.310.50 401 542 1.8E-57 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 148 2.6E-24 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 524 3.9E-191 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 509 5.2E-42 T 28-03-2018 IPR032090 Peptide chain release factor 3, C-terminal CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 Gene3D G3DSA:3.40.50.300 4 267 4.0E-33 T 28-03-2018 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 Pfam PF00009 Elongation factor Tu GTP binding domain 7 274 7.7E-52 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 SUPERFAMILY SSF54980 390 460 1.15E-14 T 28-03-2018 IPR035647 EF-G domain III/V-like CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 SUPERFAMILY SSF50447 260 390 2.78E-23 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 523 48.16 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 Gene3D G3DSA:3.30.70.870 391 463 1.8E-10 T 28-03-2018 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 Pfam PF03144 Elongation factor Tu domain 2 311 376 1.8E-7 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 SUPERFAMILY SSF52540 3 274 2.62E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.9E-12 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 PRINTS PR00315 GTP-binding elongation factor signature 98 109 4.9E-12 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 PRINTS PR00315 GTP-binding elongation factor signature 82 92 4.9E-12 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 PRINTS PR00315 GTP-binding elongation factor signature 134 143 4.9E-12 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 PRINTS PR00315 GTP-binding elongation factor signature 8 21 4.9E-12 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CJD35_RS04250 137691f001cdbee86f3942d56a955120 525 Gene3D G3DSA:2.40.30.10 268 380 1.1E-16 T 28-03-2018 CJD35_RS00475 83550d3e15510a545e5ddebca8d268bf 378 Pfam PF00155 Aminotransferase class I and II 63 367 3.6E-49 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJD35_RS00475 83550d3e15510a545e5ddebca8d268bf 378 Gene3D G3DSA:3.40.640.10 60 259 6.1E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS00475 83550d3e15510a545e5ddebca8d268bf 378 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 220 233 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CJD35_RS00475 83550d3e15510a545e5ddebca8d268bf 378 Gene3D G3DSA:3.90.1150.10 260 377 1.2E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS00475 83550d3e15510a545e5ddebca8d268bf 378 SUPERFAMILY SSF53383 2 372 5.78E-88 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS02010 c4295c7f6b881c18f32f59f9d8725d0b 108 Gene3D G3DSA:3.30.110.70 4 108 2.7E-35 T 28-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 CJD35_RS02010 c4295c7f6b881c18f32f59f9d8725d0b 108 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 4 108 23.768 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 CJD35_RS02010 c4295c7f6b881c18f32f59f9d8725d0b 108 Pfam PF01906 Putative heavy-metal-binding 4 107 1.3E-37 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 CJD35_RS02010 c4295c7f6b881c18f32f59f9d8725d0b 108 SUPERFAMILY SSF117782 5 107 1.44E-35 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 CJD35_RS15030 e61345da800f597dce5e91fc82ff610d 455 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 256 293 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS15030 e61345da800f597dce5e91fc82ff610d 455 Pfam PF00202 Aminotransferase class-III 33 448 2.0E-91 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS15030 e61345da800f597dce5e91fc82ff610d 455 PIRSF PIRSF000521 6 452 8.1E-31 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS15030 e61345da800f597dce5e91fc82ff610d 455 SUPERFAMILY SSF53383 13 449 3.14E-116 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS15030 e61345da800f597dce5e91fc82ff610d 455 Gene3D G3DSA:3.40.640.10 81 330 3.6E-63 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS15030 e61345da800f597dce5e91fc82ff610d 455 Gene3D G3DSA:3.90.1150.10 1 80 4.1E-6 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS15030 e61345da800f597dce5e91fc82ff610d 455 Gene3D G3DSA:3.90.1150.10 331 455 5.5E-39 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS12960 db9110685cf6fbdab48df9a01a95ab00 145 SUPERFAMILY SSF54593 1 142 1.25E-34 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS12960 db9110685cf6fbdab48df9a01a95ab00 145 Gene3D G3DSA:3.10.180.10 1 143 8.0E-28 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS12960 db9110685cf6fbdab48df9a01a95ab00 145 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 5 139 1.5E-38 T 28-03-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 CJD35_RS12960 db9110685cf6fbdab48df9a01a95ab00 145 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 124 5.5E-19 T 28-03-2018 CJD35_RS12480 893d15c8f4e215b139d4d83fb14f2eea 311 SUPERFAMILY SSF53850 87 294 4.96E-41 T 28-03-2018 CJD35_RS12480 893d15c8f4e215b139d4d83fb14f2eea 311 Gene3D G3DSA:3.40.190.10 87 183 2.2E-15 T 28-03-2018 CJD35_RS12480 893d15c8f4e215b139d4d83fb14f2eea 311 Gene3D G3DSA:3.40.190.10 184 266 4.4E-15 T 28-03-2018 CJD35_RS12480 893d15c8f4e215b139d4d83fb14f2eea 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 9.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS12480 893d15c8f4e215b139d4d83fb14f2eea 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 9.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS12480 893d15c8f4e215b139d4d83fb14f2eea 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS12480 893d15c8f4e215b139d4d83fb14f2eea 311 Pfam PF03466 LysR substrate binding domain 103 293 2.0E-21 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS12480 893d15c8f4e215b139d4d83fb14f2eea 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.3E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS12480 893d15c8f4e215b139d4d83fb14f2eea 311 SUPERFAMILY SSF46785 2 80 1.31E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12480 893d15c8f4e215b139d4d83fb14f2eea 311 Gene3D G3DSA:1.10.10.10 1 82 7.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12240 918c9a6bbb7047353c0875ca901ccb77 446 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 17 445 32.765 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CJD35_RS12240 918c9a6bbb7047353c0875ca901ccb77 446 PIRSF PIRSF000505 7 446 2.2E-115 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CJD35_RS12240 918c9a6bbb7047353c0875ca901ccb77 446 ProSitePatterns PS00885 EPSP synthase signature 2. 353 371 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CJD35_RS12240 918c9a6bbb7047353c0875ca901ccb77 446 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 22 444 9.1E-124 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CJD35_RS12240 918c9a6bbb7047353c0875ca901ccb77 446 Gene3D G3DSA:3.65.10.10 233 446 7.9E-48 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CJD35_RS12240 918c9a6bbb7047353c0875ca901ccb77 446 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 18 437 1.5E-104 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CJD35_RS12240 918c9a6bbb7047353c0875ca901ccb77 446 ProSitePatterns PS00104 EPSP synthase signature 1. 96 110 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CJD35_RS12240 918c9a6bbb7047353c0875ca901ccb77 446 SUPERFAMILY SSF55205 16 444 3.43E-123 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CJD35_RS12240 918c9a6bbb7047353c0875ca901ccb77 446 Gene3D G3DSA:3.65.10.10 28 232 6.2E-47 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CJD35_RS20415 7ed1fc214d035f725860b7b445aaebfe 334 Gene3D G3DSA:1.10.150.130 10 133 8.2E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20415 7ed1fc214d035f725860b7b445aaebfe 334 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 98 1.5E-12 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS20415 7ed1fc214d035f725860b7b445aaebfe 334 SUPERFAMILY SSF56349 11 307 5.0E-45 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS20415 7ed1fc214d035f725860b7b445aaebfe 334 Pfam PF00589 Phage integrase family 126 298 3.0E-30 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20415 7ed1fc214d035f725860b7b445aaebfe 334 Gene3D G3DSA:1.10.443.10 134 307 3.4E-38 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS16105 7ed1fc214d035f725860b7b445aaebfe 334 Gene3D G3DSA:1.10.150.130 10 133 8.2E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS16105 7ed1fc214d035f725860b7b445aaebfe 334 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 98 1.5E-12 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS16105 7ed1fc214d035f725860b7b445aaebfe 334 SUPERFAMILY SSF56349 11 307 5.0E-45 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS16105 7ed1fc214d035f725860b7b445aaebfe 334 Pfam PF00589 Phage integrase family 126 298 3.0E-30 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS16105 7ed1fc214d035f725860b7b445aaebfe 334 Gene3D G3DSA:1.10.443.10 134 307 3.4E-38 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19230 7ed1fc214d035f725860b7b445aaebfe 334 Gene3D G3DSA:1.10.150.130 10 133 8.2E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS19230 7ed1fc214d035f725860b7b445aaebfe 334 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 15 98 1.5E-12 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS19230 7ed1fc214d035f725860b7b445aaebfe 334 SUPERFAMILY SSF56349 11 307 5.0E-45 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS19230 7ed1fc214d035f725860b7b445aaebfe 334 Pfam PF00589 Phage integrase family 126 298 3.0E-30 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19230 7ed1fc214d035f725860b7b445aaebfe 334 Gene3D G3DSA:1.10.443.10 134 307 3.4E-38 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 SUPERFAMILY SSF56719 35 516 5.62E-168 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 SMART SM00434 16 494 5.5E-253 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 SUPERFAMILY SSF101904 528 741 3.66E-92 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 SUPERFAMILY SSF101904 778 885 3.66E-92 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 13 878 0.0 T 28-03-2018 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 782 825 6.9E-6 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 585 632 2.7E-6 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 643 688 0.0028 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 533 580 8.1E-13 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 831 877 1.5E-9 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 738 8.1E-14 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Gene3D G3DSA:3.30.1360.40 241 337 2.7E-31 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 498 2.5E-142 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Gene3D G3DSA:1.10.268.10 349 516 1.4E-46 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 4 879 22.881 T 28-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Gene3D G3DSA:3.90.199.10 39 218 5.4E-81 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS12360 c1089ea5021def139d222e91d97610dd 887 Gene3D G3DSA:2.120.10.90 528 887 1.5E-113 T 28-03-2018 CJD35_RS10270 e40083c2ba75690d01ab3b539e477887 215 Pfam PF03734 L,D-transpeptidase catalytic domain 47 151 1.6E-19 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CJD35_RS10270 e40083c2ba75690d01ab3b539e477887 215 Gene3D G3DSA:2.40.440.10 38 156 7.3E-27 T 28-03-2018 CJD35_RS10270 e40083c2ba75690d01ab3b539e477887 215 SUPERFAMILY SSF141523 44 154 5.36E-30 T 28-03-2018 CJD35_RS13475 b24234b116c954ef2b037fdaa7fd4944 99 Gene3D G3DSA:1.10.10.10 6 63 3.8E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS13475 b24234b116c954ef2b037fdaa7fd4944 99 Pfam PF12728 Helix-turn-helix domain 7 53 5.0E-10 T 28-03-2018 CJD35_RS13475 b24234b116c954ef2b037fdaa7fd4944 99 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 50 8.1E-10 T 28-03-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 CJD35_RS16955 bd5630391199e7d820e1934b053412ab 385 SUPERFAMILY SSF90002 261 351 1.7E-21 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CJD35_RS16955 bd5630391199e7d820e1934b053412ab 385 SUPERFAMILY SSF52540 13 209 1.74E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS16955 bd5630391199e7d820e1934b053412ab 385 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 13 195 2.0E-45 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CJD35_RS16955 bd5630391199e7d820e1934b053412ab 385 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 261 351 2.3E-20 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CJD35_RS16955 bd5630391199e7d820e1934b053412ab 385 Gene3D G3DSA:3.30.1220.10 235 355 2.2E-25 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CJD35_RS16955 bd5630391199e7d820e1934b053412ab 385 Gene3D G3DSA:3.40.50.300 9 214 2.2E-41 T 28-03-2018 CJD35_RS16955 bd5630391199e7d820e1934b053412ab 385 SMART SM00833 261 355 2.8E-19 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CJD35_RS11830 73a62c737b9346038dbc1e6e04800c4a 141 Pfam PF00472 RF-1 domain 9 135 1.2E-19 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CJD35_RS11830 73a62c737b9346038dbc1e6e04800c4a 141 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 23 39 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CJD35_RS11830 73a62c737b9346038dbc1e6e04800c4a 141 SUPERFAMILY SSF110916 11 101 5.75E-12 T 28-03-2018 CJD35_RS11830 73a62c737b9346038dbc1e6e04800c4a 141 Gene3D G3DSA:3.30.160.20 3 141 2.1E-37 T 28-03-2018 CJD35_RS09395 9fb424aa999549d6040f0a13f79c2968 323 SMART SM00418 6 85 3.4E-24 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS09395 9fb424aa999549d6040f0a13f79c2968 323 SUPERFAMILY SSF53335 141 300 1.62E-31 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS09395 9fb424aa999549d6040f0a13f79c2968 323 Gene3D G3DSA:1.10.10.10 1 79 5.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS09395 9fb424aa999549d6040f0a13f79c2968 323 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 2.6E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS09395 9fb424aa999549d6040f0a13f79c2968 323 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 27 38 2.6E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS09395 9fb424aa999549d6040f0a13f79c2968 323 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 2.6E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS09395 9fb424aa999549d6040f0a13f79c2968 323 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 2.6E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS09395 9fb424aa999549d6040f0a13f79c2968 323 SUPERFAMILY SSF46785 3 190 9.25E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS09395 9fb424aa999549d6040f0a13f79c2968 323 Pfam PF08241 Methyltransferase domain 155 251 2.3E-18 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CJD35_RS09395 9fb424aa999549d6040f0a13f79c2968 323 Gene3D G3DSA:3.40.50.150 81 318 3.8E-33 T 28-03-2018 CJD35_RS09395 9fb424aa999549d6040f0a13f79c2968 323 Pfam PF12840 Helix-turn-helix domain 6 63 3.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS15330 470cecd6707222d363ca5bdf811bd646 798 SUPERFAMILY SSF56935 498 798 3.66E-109 T 28-03-2018 CJD35_RS15330 470cecd6707222d363ca5bdf811bd646 798 SUPERFAMILY SSF56935 27 277 3.66E-109 T 28-03-2018 CJD35_RS15330 470cecd6707222d363ca5bdf811bd646 798 SUPERFAMILY SSF56935 307 464 3.66E-109 T 28-03-2018 CJD35_RS15330 470cecd6707222d363ca5bdf811bd646 798 Gene3D G3DSA:2.40.170.20 175 798 2.4E-65 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15330 470cecd6707222d363ca5bdf811bd646 798 Gene3D G3DSA:2.170.130.10 29 173 2.0E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15330 470cecd6707222d363ca5bdf811bd646 798 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 161 6.6E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15330 470cecd6707222d363ca5bdf811bd646 798 Pfam PF00593 TonB dependent receptor 317 781 1.8E-33 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS12685 7b66d40f8fff4e0491952c08dd66a8d2 419 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 419 47.071 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CJD35_RS12685 7b66d40f8fff4e0491952c08dd66a8d2 419 Pfam PF04996 Succinylarginine dihydrolase 4 414 1.4E-172 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CJD35_RS12685 7b66d40f8fff4e0491952c08dd66a8d2 419 SUPERFAMILY SSF55909 3 414 2.22E-170 T 28-03-2018 CJD35_RS12685 7b66d40f8fff4e0491952c08dd66a8d2 419 Gene3D G3DSA:3.75.10.20 2 417 5.3E-177 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CJD35_RS02080 73d4d9292e60870ed8497f461be51fa5 376 SUPERFAMILY SSF53187 109 375 1.03E-55 T 28-03-2018 CJD35_RS02080 73d4d9292e60870ed8497f461be51fa5 376 Gene3D G3DSA:3.40.630.10 108 376 8.9E-44 T 28-03-2018 CJD35_RS02080 73d4d9292e60870ed8497f461be51fa5 376 Pfam PF00246 Zinc carboxypeptidase 125 233 5.4E-15 T 28-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CJD35_RS20335 b78e3a7f585cfeef45920154b3bcee54 34 Gene3D G3DSA:1.20.1510.10 1 34 6.2E-5 T 28-03-2018 CJD35_RS20335 b78e3a7f585cfeef45920154b3bcee54 34 SUPERFAMILY SSF161111 1 33 3.66E-5 T 28-03-2018 CJD35_RS11390 376003fdd13106785304e2e683fa3298 781 Gene3D G3DSA:2.160.20.10 267 490 1.1E-8 T 28-03-2018 IPR012334 Pectin lyase fold CJD35_RS11390 376003fdd13106785304e2e683fa3298 781 SUPERFAMILY SSF51126 263 664 1.38E-6 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CJD35_RS11545 2d3aeba0613ff5ea5cfd522f1ecb45a2 174 Gene3D G3DSA:1.10.10.10 84 174 1.3E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19185 2dbcd035c4a0d5b3d1292cd215a577a2 617 Gene3D G3DSA:3.40.50.300 211 403 6.3E-23 T 28-03-2018 CJD35_RS19185 2dbcd035c4a0d5b3d1292cd215a577a2 617 SUPERFAMILY SSF52540 219 581 1.32E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS19185 2dbcd035c4a0d5b3d1292cd215a577a2 617 Pfam PF08378 Nuclease-related domain 24 124 1.1E-6 T 28-03-2018 IPR011528 Nuclease-related domain, NERD CJD35_RS19185 2dbcd035c4a0d5b3d1292cd215a577a2 617 Gene3D G3DSA:3.40.50.300 414 594 1.9E-6 T 28-03-2018 CJD35_RS19185 2dbcd035c4a0d5b3d1292cd215a577a2 617 Pfam PF13245 AAA domain 226 392 1.3E-5 T 28-03-2018 CJD35_RS10995 307c921b00e77283cef145fd3e81954b 41 Gene3D G3DSA:1.20.5.160 1 39 2.4E-10 T 28-03-2018 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CJD35_RS10995 307c921b00e77283cef145fd3e81954b 41 SUPERFAMILY SSF81469 5 38 4.05E-6 T 28-03-2018 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CJD35_RS10995 307c921b00e77283cef145fd3e81954b 41 Pfam PF07835 Bacterial aa3 type cytochrome c oxidase subunit IV 12 38 1.8E-7 T 28-03-2018 IPR012422 Cytochrome c oxidase, subunit IV, bacterial aa3 type KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 SUPERFAMILY SSF48264 20 406 1.31E-75 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 Gene3D G3DSA:1.10.630.10 28 407 5.9E-56 T 28-03-2018 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 Pfam PF00067 Cytochrome P450 184 276 1.1E-6 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 Pfam PF00067 Cytochrome P450 285 375 5.6E-10 T 28-03-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 PRINTS PR00359 B-class P450 signature 167 182 1.7E-32 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 PRINTS PR00359 B-class P450 signature 150 166 1.7E-32 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 PRINTS PR00359 B-class P450 signature 203 225 1.7E-32 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 PRINTS PR00359 B-class P450 signature 328 343 1.7E-32 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 PRINTS PR00359 B-class P450 signature 357 368 1.7E-32 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 PRINTS PR00359 B-class P450 signature 300 327 1.7E-32 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 PRINTS PR00359 B-class P450 signature 348 357 1.7E-32 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS15315 5813d9285d9c7def3b0230bab4c9d7d1 407 PRINTS PR00359 B-class P450 signature 104 115 1.7E-32 T 28-03-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 Pfam PF00813 FliP family 101 293 1.1E-76 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 157 169 2.1E-20 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 169 183 2.1E-20 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 287 297 2.1E-20 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 197 209 2.1E-20 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 219 231 2.1E-20 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 97 106 2.1E-20 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 101 297 5.0E-81 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 226 246 6.3E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 99 118 6.3E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 118 138 6.3E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 247 268 6.3E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 138 157 6.3E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 271 296 6.3E-67 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 226 241 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJD35_RS03090 361d0d5740a51d9c69dfd307eb22919b 299 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 274 286 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CJD35_RS11775 85b1e472b669ebb73f8d7eae48c474ea 381 SUPERFAMILY SSF53756 2 374 3.95E-36 T 28-03-2018 CJD35_RS11775 85b1e472b669ebb73f8d7eae48c474ea 381 Pfam PF13439 Glycosyltransferase Family 4 18 178 1.3E-11 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS11775 85b1e472b669ebb73f8d7eae48c474ea 381 Gene3D G3DSA:3.40.50.2000 200 368 1.4E-19 T 28-03-2018 CJD35_RS11775 85b1e472b669ebb73f8d7eae48c474ea 381 Pfam PF13692 Glycosyl transferases group 1 200 340 4.0E-12 T 28-03-2018 CJD35_RS13355 a543f4177aea3033cc122f259a58ef1f 382 TIGRFAM TIGR02226 two_anch: N-terminal double-transmembrane domain 4 79 3.4E-21 T 28-03-2018 IPR011933 Double transmembrane domain CJD35_RS13355 a543f4177aea3033cc122f259a58ef1f 382 Pfam PF07584 Aerotolerance regulator N-terminal 5 77 6.8E-10 T 28-03-2018 IPR024163 Aerotolerance regulator, N-terminal CJD35_RS14250 2209e428c4432743f135ea6c76c45815 274 SUPERFAMILY SSF50156 195 267 4.34E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS14250 2209e428c4432743f135ea6c76c45815 274 Gene3D G3DSA:2.30.42.10 93 267 5.9E-11 T 28-03-2018 CJD35_RS14250 2209e428c4432743f135ea6c76c45815 274 Pfam PF13180 PDZ domain 209 269 3.9E-7 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS14250 2209e428c4432743f135ea6c76c45815 274 Pfam PF11356 Type II secretion system protein C 24 152 2.5E-19 T 28-03-2018 IPR024961 Type II secretion system protein C, N-terminal CJD35_RS06510 1aaeded93666613fb29cf7b8de2d5b85 307 Gene3D G3DSA:3.40.50.720 1 142 2.2E-11 T 28-03-2018 CJD35_RS06510 1aaeded93666613fb29cf7b8de2d5b85 307 PIRSF PIRSF015689 1 297 7.2E-132 T 28-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CJD35_RS06510 1aaeded93666613fb29cf7b8de2d5b85 307 Gene3D G3DSA:3.30.360.10 143 267 2.9E-65 T 28-03-2018 CJD35_RS06510 1aaeded93666613fb29cf7b8de2d5b85 307 Pfam PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation 130 267 4.0E-65 T 28-03-2018 IPR015426 Acetaldehyde dehydrogenase, C-terminal GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CJD35_RS06510 1aaeded93666613fb29cf7b8de2d5b85 307 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 117 5.1E-9 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CJD35_RS06510 1aaeded93666613fb29cf7b8de2d5b85 307 TIGRFAM TIGR03215 ac_ald_DH_ac: acetaldehyde dehydrogenase (acetylating) 3 292 1.0E-141 T 28-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CJD35_RS06510 1aaeded93666613fb29cf7b8de2d5b85 307 Hamap MF_01657 Acetaldehyde dehydrogenase [mhpF]. 1 307 143.959 T 28-03-2018 IPR003361 Acetaldehyde dehydrogenase GO:0008774|GO:0019439|GO:0055114 KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00650+1.2.1.10|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-6587|MetaCyc: PWY-7085|MetaCyc: PWY-7180 CJD35_RS06510 1aaeded93666613fb29cf7b8de2d5b85 307 SMART SM00859 5 120 1.5E-5 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CJD35_RS06510 1aaeded93666613fb29cf7b8de2d5b85 307 SUPERFAMILY SSF55347 130 268 3.73E-60 T 28-03-2018 CJD35_RS06510 1aaeded93666613fb29cf7b8de2d5b85 307 SUPERFAMILY SSF51735 1 154 2.35E-25 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10225 a1c9c6b9c4b86aa16aa88f7a88556fe2 204 SUPERFAMILY SSF49503 45 139 1.47E-18 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS10225 a1c9c6b9c4b86aa16aa88f7a88556fe2 204 Gene3D G3DSA:2.60.40.10 16 186 1.4E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS03875 d693eaff852e33701fdc201b3bb20258 182 Pfam PF00436 Single-strand binding protein family 5 105 4.1E-35 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CJD35_RS03875 d693eaff852e33701fdc201b3bb20258 182 Gene3D G3DSA:2.40.50.140 1 118 7.6E-38 T 28-03-2018 CJD35_RS03875 d693eaff852e33701fdc201b3bb20258 182 Hamap MF_00984 Single-stranded DNA-binding protein. 5 118 32.905 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CJD35_RS03875 d693eaff852e33701fdc201b3bb20258 182 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 182 4.3E-44 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CJD35_RS03875 d693eaff852e33701fdc201b3bb20258 182 SUPERFAMILY SSF50249 4 182 9.94E-48 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS04465 df676015915492e998de302f6426c6c9 618 Gene3D G3DSA:3.40.50.1110 311 612 9.2E-8 T 28-03-2018 CJD35_RS04465 df676015915492e998de302f6426c6c9 618 Pfam PF01757 Acyltransferase family 5 318 9.2E-24 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CJD35_RS02635 a3d128f114e35edecaff2f327e4558e5 310 SMART SM00479 62 225 2.0E-13 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CJD35_RS02635 a3d128f114e35edecaff2f327e4558e5 310 SUPERFAMILY SSF53098 61 222 8.1E-34 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS02635 a3d128f114e35edecaff2f327e4558e5 310 Gene3D G3DSA:3.30.420.10 62 242 2.1E-22 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS02635 a3d128f114e35edecaff2f327e4558e5 310 Pfam PF00929 Exonuclease 62 215 1.2E-14 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CJD35_RS17720 ef3d1afec0062fe11e34bbc91542aa59 155 SUPERFAMILY SSF46785 16 153 2.53E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17720 ef3d1afec0062fe11e34bbc91542aa59 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 99 6.7E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS17720 ef3d1afec0062fe11e34bbc91542aa59 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 67 83 6.7E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS17720 ef3d1afec0062fe11e34bbc91542aa59 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 119 6.7E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS17720 ef3d1afec0062fe11e34bbc91542aa59 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 133 153 6.7E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS17720 ef3d1afec0062fe11e34bbc91542aa59 155 Gene3D G3DSA:1.10.10.10 22 154 2.2E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17720 ef3d1afec0062fe11e34bbc91542aa59 155 SMART SM00347 43 146 2.0E-15 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS17720 ef3d1afec0062fe11e34bbc91542aa59 155 Pfam PF01047 MarR family 50 106 8.2E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 2.6E-21 T 28-03-2018 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.6E-21 T 28-03-2018 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 171 2.6E-21 T 28-03-2018 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 2.6E-21 T 28-03-2018 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 Gene3D G3DSA:3.50.50.60 2 103 2.5E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 Pfam PF14759 Reductase C-terminal 322 405 2.2E-29 T 28-03-2018 IPR028202 Reductase, C-terminal CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 SUPERFAMILY SSF55424 315 405 1.15E-30 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.9E-26 T 28-03-2018 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 2.9E-26 T 28-03-2018 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.9E-26 T 28-03-2018 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 2.9E-26 T 28-03-2018 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 2.9E-26 T 28-03-2018 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 Gene3D G3DSA:3.50.50.60 104 237 6.9E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 Gene3D G3DSA:3.50.50.60 242 324 4.4E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 Gene3D G3DSA:3.30.390.30 325 407 9.0E-29 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 303 1.1E-61 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 SUPERFAMILY SSF51905 141 314 5.63E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11180 923b5bbac76464c25aec7202b8f15a70 408 SUPERFAMILY SSF51905 2 191 9.15E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17190 1f1c67836a032eb7d62a88c6e47bf85a 560 Gene3D G3DSA:3.40.50.300 336 542 5.0E-9 T 28-03-2018 CJD35_RS17190 1f1c67836a032eb7d62a88c6e47bf85a 560 SUPERFAMILY SSF52540 334 531 3.34E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS17190 1f1c67836a032eb7d62a88c6e47bf85a 560 Gene3D G3DSA:1.20.1560.10 13 331 1.3E-16 T 28-03-2018 CJD35_RS17190 1f1c67836a032eb7d62a88c6e47bf85a 560 SUPERFAMILY SSF90123 14 325 9.16E-32 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CJD35_RS15535 8e0f043e7224dd61bfdd7245540a68d4 168 Pfam PF13577 SnoaL-like domain 8 135 5.3E-25 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS15535 8e0f043e7224dd61bfdd7245540a68d4 168 SUPERFAMILY SSF54427 1 140 7.13E-30 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS15535 8e0f043e7224dd61bfdd7245540a68d4 168 Gene3D G3DSA:3.10.450.50 3 138 6.7E-31 T 28-03-2018 CJD35_RS00080 16a47512282452d0fd5829f2163d09b1 224 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 220 4.0E-47 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS00080 16a47512282452d0fd5829f2163d09b1 224 SUPERFAMILY SSF51366 2 222 5.03E-66 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJD35_RS00080 16a47512282452d0fd5829f2163d09b1 224 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 3 220 7.0E-40 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS00080 16a47512282452d0fd5829f2163d09b1 224 SMART SM00934 4 220 9.6E-77 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS00080 16a47512282452d0fd5829f2163d09b1 224 Gene3D G3DSA:3.20.20.70 1 224 9.0E-61 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS00080 16a47512282452d0fd5829f2163d09b1 224 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 224 30.004 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS00080 16a47512282452d0fd5829f2163d09b1 224 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 28-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS03500 e183e741d07a019a9bc530f122cc357b 453 SMART SM00283 2 270 2.9E-30 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS03500 e183e741d07a019a9bc530f122cc357b 453 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 81 233 3.0E-30 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS03500 e183e741d07a019a9bc530f122cc357b 453 Gene3D G3DSA:1.10.287.950 42 268 7.9E-39 T 28-03-2018 CJD35_RS03500 e183e741d07a019a9bc530f122cc357b 453 SUPERFAMILY SSF58104 16 274 1.57E-48 T 28-03-2018 CJD35_RS02625 5c59e51a70a171d8e403d6c4e6c5b75d 56 Gene3D G3DSA:3.40.630.30 1 56 1.2E-10 T 28-03-2018 CJD35_RS02625 5c59e51a70a171d8e403d6c4e6c5b75d 56 SUPERFAMILY SSF55729 2 56 2.38E-10 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS09195 ccca80c3976cb54610860aec9ef34b41 416 SUPERFAMILY SSF102114 117 353 1.44E-51 T 28-03-2018 CJD35_RS09195 ccca80c3976cb54610860aec9ef34b41 416 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 390 8.7E-128 T 28-03-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 CJD35_RS09195 ccca80c3976cb54610860aec9ef34b41 416 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 135 155 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CJD35_RS09195 ccca80c3976cb54610860aec9ef34b41 416 Gene3D G3DSA:3.40.50.280 2 99 2.3E-4 T 28-03-2018 CJD35_RS09195 ccca80c3976cb54610860aec9ef34b41 416 Pfam PF00919 Uncharacterized protein family UPF0004 6 88 1.4E-14 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CJD35_RS09195 ccca80c3976cb54610860aec9ef34b41 416 SMART SM00729 131 349 4.1E-51 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS09195 ccca80c3976cb54610860aec9ef34b41 416 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 6 410 1.1E-98 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CJD35_RS09195 ccca80c3976cb54610860aec9ef34b41 416 Gene3D G3DSA:3.20.20.70 109 393 1.6E-41 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS09195 ccca80c3976cb54610860aec9ef34b41 416 Pfam PF04055 Radical SAM superfamily 136 307 5.2E-22 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS06485 5e4b8f0e21932658d3061cc74e9f3997 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 298 309 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS06485 5e4b8f0e21932658d3061cc74e9f3997 503 Pfam PF00171 Aldehyde dehydrogenase family 30 499 3.8E-154 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS06485 5e4b8f0e21932658d3061cc74e9f3997 503 TIGRFAM TIGR03216 OH_muco_semi_DH: 2-hydroxymuconic semialdehyde dehydrogenase 21 503 2.6E-264 T 28-03-2018 IPR017628 2-hydroxymuconic semialdehyde dehydrogenase GO:0016620|GO:0055114 CJD35_RS06485 5e4b8f0e21932658d3061cc74e9f3997 503 SUPERFAMILY SSF53720 20 502 3.14E-155 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS06485 5e4b8f0e21932658d3061cc74e9f3997 503 Gene3D G3DSA:3.40.309.10 287 485 3.4E-69 T 28-03-2018 CJD35_RS06485 5e4b8f0e21932658d3061cc74e9f3997 503 Gene3D G3DSA:3.40.605.10 8 286 3.5E-88 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS09705 6bb34132d4e77d26107fa44edb9eb9ef 509 SUPERFAMILY SSF52540 142 463 1.96E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09705 6bb34132d4e77d26107fa44edb9eb9ef 509 Pfam PF00437 Type II/IV secretion system protein 161 437 2.7E-78 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CJD35_RS09705 6bb34132d4e77d26107fa44edb9eb9ef 509 Gene3D G3DSA:3.40.50.300 288 472 2.1E-20 T 28-03-2018 CJD35_RS09705 6bb34132d4e77d26107fa44edb9eb9ef 509 Gene3D G3DSA:3.30.450.90 157 261 1.4E-37 T 28-03-2018 CJD35_RS02140 cac11678bba9e43124d485e69bd84172 531 SUPERFAMILY SSF51621 3 391 6.28E-126 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJD35_RS02140 cac11678bba9e43124d485e69bd84172 531 SUPERFAMILY SSF51621 428 513 6.28E-126 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CJD35_RS02140 cac11678bba9e43124d485e69bd84172 531 Gene3D G3DSA:3.20.20.60 1 513 2.2E-129 T 28-03-2018 CJD35_RS02140 cac11678bba9e43124d485e69bd84172 531 PIRSF PIRSF001362 288 403 5.9E-12 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CJD35_RS02140 cac11678bba9e43124d485e69bd84172 531 PIRSF PIRSF001362 423 530 6.0E-6 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CJD35_RS02140 cac11678bba9e43124d485e69bd84172 531 PIRSF PIRSF001362 3 291 8.2E-29 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CJD35_RS02140 cac11678bba9e43124d485e69bd84172 531 Pfam PF00463 Isocitrate lyase family 97 268 5.5E-20 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CJD35_RS02140 cac11678bba9e43124d485e69bd84172 531 Pfam PF00463 Isocitrate lyase family 329 393 2.8E-9 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CJD35_RS02140 cac11678bba9e43124d485e69bd84172 531 Pfam PF00463 Isocitrate lyase family 431 525 2.3E-12 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CJD35_RS13860 2d954ad040f0fa029aa85b8e9d8d236b 574 SUPERFAMILY SSF48208 185 570 3.74E-84 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CJD35_RS13860 2d954ad040f0fa029aa85b8e9d8d236b 574 Gene3D G3DSA:1.50.10.10 168 543 4.3E-76 T 28-03-2018 CJD35_RS13860 2d954ad040f0fa029aa85b8e9d8d236b 574 Pfam PF00723 Glycosyl hydrolases family 15 200 560 8.0E-28 T 28-03-2018 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: R-HSA-70221 CJD35_RS16535 034ffa901eb4539ac7fa4f68fd189139 378 Pfam PF01266 FAD dependent oxidoreductase 6 356 1.2E-58 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CJD35_RS16535 034ffa901eb4539ac7fa4f68fd189139 378 Gene3D G3DSA:3.50.50.60 2 378 2.1E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16535 034ffa901eb4539ac7fa4f68fd189139 378 SUPERFAMILY SSF51905 317 374 9.06E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16535 034ffa901eb4539ac7fa4f68fd189139 378 SUPERFAMILY SSF51905 6 220 9.06E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16535 034ffa901eb4539ac7fa4f68fd189139 378 SUPERFAMILY SSF54373 242 317 1.35E-5 T 28-03-2018 CJD35_RS22120 92ca12a33d2b848f5f52c83be95fb666 275 Gene3D G3DSA:3.90.25.10 185 274 2.1E-23 T 28-03-2018 CJD35_RS22120 92ca12a33d2b848f5f52c83be95fb666 275 Gene3D G3DSA:3.40.50.720 32 184 1.8E-12 T 28-03-2018 CJD35_RS22120 92ca12a33d2b848f5f52c83be95fb666 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 32 254 8.9E-33 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CJD35_RS22120 92ca12a33d2b848f5f52c83be95fb666 275 SUPERFAMILY SSF51735 33 270 4.19E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10900 a511f5e4de4a0b709e8bbad89ad8822c 294 SUPERFAMILY SSF48179 163 293 1.25E-40 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS10900 a511f5e4de4a0b709e8bbad89ad8822c 294 Gene3D G3DSA:1.10.1040.10 173 294 6.3E-34 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS10900 a511f5e4de4a0b709e8bbad89ad8822c 294 PIRSF PIRSF000103 1 294 2.1E-78 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CJD35_RS10900 a511f5e4de4a0b709e8bbad89ad8822c 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 291 4.1E-39 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CJD35_RS10900 a511f5e4de4a0b709e8bbad89ad8822c 294 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CJD35_RS10900 a511f5e4de4a0b709e8bbad89ad8822c 294 Gene3D G3DSA:3.40.50.720 1 172 7.9E-34 T 28-03-2018 CJD35_RS10900 a511f5e4de4a0b709e8bbad89ad8822c 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 161 3.0E-49 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CJD35_RS10900 a511f5e4de4a0b709e8bbad89ad8822c 294 SUPERFAMILY SSF51735 3 162 5.48E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10900 a511f5e4de4a0b709e8bbad89ad8822c 294 TIGRFAM TIGR01692 HIBADH: 3-hydroxyisobutyrate dehydrogenase 7 291 2.4E-118 T 28-03-2018 IPR011548 3-hydroxyisobutyrate dehydrogenase GO:0008442|GO:0051287|GO:0055114 KEGG: 00280+1.1.1.31|Reactome: R-HSA-70895 CJD35_RS11310 5115340f5bde2c61d34a3c7765e75ef4 328 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CJD35_RS11310 5115340f5bde2c61d34a3c7765e75ef4 328 Gene3D G3DSA:3.40.50.1100 143 327 8.6E-35 T 28-03-2018 CJD35_RS11310 5115340f5bde2c61d34a3c7765e75ef4 328 Gene3D G3DSA:3.40.50.1100 35 142 7.9E-29 T 28-03-2018 CJD35_RS11310 5115340f5bde2c61d34a3c7765e75ef4 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 311 4.1E-72 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS11310 5115340f5bde2c61d34a3c7765e75ef4 328 SUPERFAMILY SSF53686 9 322 4.06E-87 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS01435 d82416e6fc30e9317f9b931271ab488c 479 Gene3D G3DSA:3.10.350.10 430 478 3.5E-5 T 28-03-2018 CJD35_RS01435 d82416e6fc30e9317f9b931271ab488c 479 Gene3D G3DSA:3.30.2010.10 44 134 1.4E-17 T 28-03-2018 CJD35_RS01435 d82416e6fc30e9317f9b931271ab488c 479 Pfam PF01476 LysM domain 432 476 7.9E-6 T 28-03-2018 IPR018392 LysM domain CJD35_RS01435 d82416e6fc30e9317f9b931271ab488c 479 Pfam PF01435 Peptidase family M48 51 243 2.0E-36 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CJD35_RS14615 fa5737b0f3d2a3a105bd32fe893e1c18 198 Gene3D G3DSA:3.30.70.560 5 195 6.1E-44 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CJD35_RS14615 fa5737b0f3d2a3a105bd32fe893e1c18 198 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 29 140 2.4E-27 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CJD35_RS14615 fa5737b0f3d2a3a105bd32fe893e1c18 198 SUPERFAMILY SSF55083 7 162 1.31E-38 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CJD35_RS14615 fa5737b0f3d2a3a105bd32fe893e1c18 198 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 95 106 - T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CJD35_RS14615 fa5737b0f3d2a3a105bd32fe893e1c18 198 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 11 140 9.6E-28 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CJD35_RS14235 9a54a3299d49e40711d6f48936e5fb63 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 3.3E-27 T 28-03-2018 IPR003004 GspF/PilC family CJD35_RS14235 9a54a3299d49e40711d6f48936e5fb63 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 3.3E-27 T 28-03-2018 IPR003004 GspF/PilC family CJD35_RS14235 9a54a3299d49e40711d6f48936e5fb63 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 3.3E-27 T 28-03-2018 IPR003004 GspF/PilC family CJD35_RS14235 9a54a3299d49e40711d6f48936e5fb63 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 3.3E-27 T 28-03-2018 IPR003004 GspF/PilC family CJD35_RS14235 9a54a3299d49e40711d6f48936e5fb63 405 Pfam PF00482 Type II secretion system (T2SS), protein F 274 395 3.9E-29 T 28-03-2018 IPR018076 Type II secretion system F domain CJD35_RS14235 9a54a3299d49e40711d6f48936e5fb63 405 Pfam PF00482 Type II secretion system (T2SS), protein F 71 193 1.0E-24 T 28-03-2018 IPR018076 Type II secretion system F domain CJD35_RS14235 9a54a3299d49e40711d6f48936e5fb63 405 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 165 193 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CJD35_RS14235 9a54a3299d49e40711d6f48936e5fb63 405 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 3.0E-143 T 28-03-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 CJD35_RS08635 8944b43f9d4698e3468d9ed1ee804353 241 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 65 219 7.1E-60 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CJD35_RS08635 8944b43f9d4698e3468d9ed1ee804353 241 Pfam PF03719 Ribosomal protein S5, C-terminal domain 144 214 3.2E-27 T 28-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CJD35_RS08635 8944b43f9d4698e3468d9ed1ee804353 241 Gene3D G3DSA:3.30.160.20 66 128 1.2E-24 T 28-03-2018 CJD35_RS08635 8944b43f9d4698e3468d9ed1ee804353 241 ProSitePatterns PS00585 Ribosomal protein S5 signature. 84 116 - T 28-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CJD35_RS08635 8944b43f9d4698e3468d9ed1ee804353 241 Pfam PF00333 Ribosomal protein S5, N-terminal domain 67 131 3.4E-27 T 28-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CJD35_RS08635 8944b43f9d4698e3468d9ed1ee804353 241 SUPERFAMILY SSF54768 64 132 3.35E-22 T 28-03-2018 CJD35_RS08635 8944b43f9d4698e3468d9ed1ee804353 241 Gene3D G3DSA:3.30.230.10 133 223 1.7E-28 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJD35_RS08635 8944b43f9d4698e3468d9ed1ee804353 241 SUPERFAMILY SSF54211 136 216 8.09E-23 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS08635 8944b43f9d4698e3468d9ed1ee804353 241 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 48 220 33.882 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CJD35_RS15555 1edd8f1da720dcc7889a42842c0da673 719 Gene3D G3DSA:3.40.50.720 250 491 3.2E-65 T 28-03-2018 CJD35_RS15555 1edd8f1da720dcc7889a42842c0da673 719 SUPERFAMILY SSF48179 616 705 5.7E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS15555 1edd8f1da720dcc7889a42842c0da673 719 SUPERFAMILY SSF51735 309 491 3.33E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15555 1edd8f1da720dcc7889a42842c0da673 719 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 197 4.4E-38 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS15555 1edd8f1da720dcc7889a42842c0da673 719 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 312 490 2.7E-61 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS15555 1edd8f1da720dcc7889a42842c0da673 719 Gene3D G3DSA:3.90.226.10 2 199 1.4E-53 T 28-03-2018 CJD35_RS15555 1edd8f1da720dcc7889a42842c0da673 719 Gene3D G3DSA:1.10.1040.10 617 704 1.1E-14 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS15555 1edd8f1da720dcc7889a42842c0da673 719 SUPERFAMILY SSF48179 492 629 1.19E-22 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS15555 1edd8f1da720dcc7889a42842c0da673 719 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 493 590 4.7E-17 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS15555 1edd8f1da720dcc7889a42842c0da673 719 Gene3D G3DSA:1.10.1040.10 492 595 4.1E-16 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS15555 1edd8f1da720dcc7889a42842c0da673 719 SUPERFAMILY SSF52096 2 301 2.66E-65 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS22085 7b113d6b898269835240f16b7c713bef 125 Gene3D G3DSA:3.40.50.300 1 123 7.5E-6 T 28-03-2018 CJD35_RS19735 a886038f780dacfe841419ef0f52e3f9 291 Pfam PF13098 Thioredoxin-like domain 173 286 4.0E-12 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS19735 a886038f780dacfe841419ef0f52e3f9 291 SUPERFAMILY SSF52833 152 287 3.84E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS19735 a886038f780dacfe841419ef0f52e3f9 291 SUPERFAMILY SSF54423 43 98 6.47E-8 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CJD35_RS19735 a886038f780dacfe841419ef0f52e3f9 291 Gene3D G3DSA:3.10.450.70 35 97 9.4E-14 T 28-03-2018 CJD35_RS19735 a886038f780dacfe841419ef0f52e3f9 291 Pfam PF10411 Disulfide bond isomerase protein N-terminus 46 96 1.1E-13 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CJD35_RS19735 a886038f780dacfe841419ef0f52e3f9 291 Gene3D G3DSA:3.40.30.10 160 288 1.3E-15 T 28-03-2018 CJD35_RS11720 77b667bc68f18d1299b031855040961b 495 SUPERFAMILY SSF52540 5 264 4.28E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS11720 77b667bc68f18d1299b031855040961b 495 Gene3D G3DSA:3.40.50.300 21 209 2.1E-10 T 28-03-2018 CJD35_RS11720 77b667bc68f18d1299b031855040961b 495 TIGRFAM TIGR03015 pepcterm_ATPase: putative secretion ATPase, PEP-CTERM locus subfamily 1 266 8.0E-105 T 28-03-2018 IPR017466 ATPase, secretion system, PEP-CTERM, predicted CJD35_RS11720 77b667bc68f18d1299b031855040961b 495 Pfam PF13401 AAA domain 42 171 6.9E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS11720 77b667bc68f18d1299b031855040961b 495 SMART SM00382 42 208 8.3E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS04815 a4ac4400e2524de3e5b43f7ba0f2e69a 264 SUPERFAMILY SSF56655 8 255 1.15E-53 T 28-03-2018 CJD35_RS04815 a4ac4400e2524de3e5b43f7ba0f2e69a 264 Gene3D G3DSA:3.30.540.10 4 147 3.7E-32 T 28-03-2018 CJD35_RS04815 a4ac4400e2524de3e5b43f7ba0f2e69a 264 Gene3D G3DSA:3.40.190.80 148 262 6.4E-17 T 28-03-2018 CJD35_RS04815 a4ac4400e2524de3e5b43f7ba0f2e69a 264 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 86 99 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site CJD35_RS04815 a4ac4400e2524de3e5b43f7ba0f2e69a 264 Pfam PF00459 Inositol monophosphatase family 38 256 4.1E-39 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS04815 a4ac4400e2524de3e5b43f7ba0f2e69a 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 200 224 2.2E-18 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS04815 a4ac4400e2524de3e5b43f7ba0f2e69a 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 2.2E-18 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS04815 a4ac4400e2524de3e5b43f7ba0f2e69a 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 168 189 2.2E-18 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS04815 a4ac4400e2524de3e5b43f7ba0f2e69a 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 135 158 2.2E-18 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS04815 a4ac4400e2524de3e5b43f7ba0f2e69a 264 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 203 217 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CJD35_RS17475 c7a2ae1735878a94c56460703bd0acbd 311 Gene3D G3DSA:3.40.190.10 182 268 3.8E-11 T 28-03-2018 CJD35_RS17475 c7a2ae1735878a94c56460703bd0acbd 311 Gene3D G3DSA:1.10.10.10 5 88 1.9E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17475 c7a2ae1735878a94c56460703bd0acbd 311 Gene3D G3DSA:3.40.190.10 91 181 5.6E-16 T 28-03-2018 CJD35_RS17475 c7a2ae1735878a94c56460703bd0acbd 311 Pfam PF03466 LysR substrate binding domain 90 285 8.1E-26 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS17475 c7a2ae1735878a94c56460703bd0acbd 311 SUPERFAMILY SSF46785 6 112 2.18E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17475 c7a2ae1735878a94c56460703bd0acbd 311 SUPERFAMILY SSF53850 85 292 9.0E-26 T 28-03-2018 CJD35_RS17475 c7a2ae1735878a94c56460703bd0acbd 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 5.6E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS06015 af5143365750c2fa8254acb63b743cf3 394 Gene3D G3DSA:2.120.10.30 40 164 0.002 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS06015 af5143365750c2fa8254acb63b743cf3 394 SUPERFAMILY SSF63829 48 177 2.35E-15 T 28-03-2018 CJD35_RS06015 af5143365750c2fa8254acb63b743cf3 394 SUPERFAMILY SSF63829 259 382 2.35E-15 T 28-03-2018 CJD35_RS06015 af5143365750c2fa8254acb63b743cf3 394 Gene3D G3DSA:2.115.10.10 181 391 2.9E-14 T 28-03-2018 CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 SMART SM00421 139 196 4.1E-24 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 SMART SM00448 4 115 1.1E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 Gene3D G3DSA:3.40.50.2300 1 111 8.3E-31 T 28-03-2018 CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 Gene3D G3DSA:1.10.10.10 112 202 9.6E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 SUPERFAMILY SSF52172 2 143 1.1E-35 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 3.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 3.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 3.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 Pfam PF00072 Response regulator receiver domain 6 115 8.3E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 196 3.7E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS13990 878ddf4f143859b62393e603e9b0b0d7 202 SUPERFAMILY SSF46894 131 201 5.44E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 Pfam PF07690 Major Facilitator Superfamily 17 360 3.2E-52 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 Gene3D G3DSA:1.20.1250.20 3 200 1.1E-35 T 28-03-2018 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 Gene3D G3DSA:1.20.1250.20 208 403 2.3E-23 T 28-03-2018 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 SUPERFAMILY SSF103473 8 401 7.59E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 PRINTS PR01035 Tetracycline resistance protein signature 284 305 6.3E-66 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 PRINTS PR01035 Tetracycline resistance protein signature 52 71 6.3E-66 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 PRINTS PR01035 Tetracycline resistance protein signature 256 276 6.3E-66 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 PRINTS PR01035 Tetracycline resistance protein signature 344 367 6.3E-66 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 PRINTS PR01035 Tetracycline resistance protein signature 168 188 6.3E-66 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 PRINTS PR01035 Tetracycline resistance protein signature 309 329 6.3E-66 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 PRINTS PR01035 Tetracycline resistance protein signature 140 162 6.3E-66 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 PRINTS PR01035 Tetracycline resistance protein signature 83 107 6.3E-66 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 PRINTS PR01035 Tetracycline resistance protein signature 110 131 6.3E-66 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJD35_RS06810 bd725ac442100234ed8867f49cfc6bf1 410 PRINTS PR01035 Tetracycline resistance protein signature 22 38 6.3E-66 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CJD35_RS17750 598091a9d6ee7afd2694c65c3d5aa450 471 Gene3D G3DSA:1.20.1250.20 263 470 6.1E-19 T 28-03-2018 CJD35_RS17750 598091a9d6ee7afd2694c65c3d5aa450 471 Pfam PF07690 Major Facilitator Superfamily 41 415 1.3E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS17750 598091a9d6ee7afd2694c65c3d5aa450 471 SUPERFAMILY SSF103473 28 459 1.7E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS17750 598091a9d6ee7afd2694c65c3d5aa450 471 Gene3D G3DSA:1.20.1250.20 27 235 9.8E-25 T 28-03-2018 CJD35_RS04365 fcadef9d03efefbbb0b1ef038b2be091 156 SUPERFAMILY SSF54534 82 148 6.02E-13 T 28-03-2018 CJD35_RS04365 fcadef9d03efefbbb0b1ef038b2be091 156 Gene3D G3DSA:3.10.50.30 75 153 4.2E-16 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJD35_RS04365 fcadef9d03efefbbb0b1ef038b2be091 156 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 150 2.8E-17 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJD35_RS14460 2080ce8380a72bd065ad943539bcf9a7 192 Gene3D G3DSA:2.70.70.10 31 191 3.3E-32 T 28-03-2018 CJD35_RS14460 2080ce8380a72bd065ad943539bcf9a7 192 Pfam PF01551 Peptidase family M23 77 184 2.5E-22 T 28-03-2018 IPR016047 Peptidase M23 CJD35_RS14460 2080ce8380a72bd065ad943539bcf9a7 192 SUPERFAMILY SSF51261 59 188 4.39E-33 T 28-03-2018 IPR011055 Duplicated hybrid motif CJD35_RS06145 32ac8145d02d3a96bbfb45f53e265e15 284 Gene3D G3DSA:3.40.190.10 18 281 7.3E-23 T 28-03-2018 CJD35_RS06145 32ac8145d02d3a96bbfb45f53e265e15 284 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 117 274 3.0E-13 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJD35_RS06145 32ac8145d02d3a96bbfb45f53e265e15 284 SMART SM00062 35 276 1.5E-4 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CJD35_RS06145 32ac8145d02d3a96bbfb45f53e265e15 284 SUPERFAMILY SSF53850 27 277 3.53E-25 T 28-03-2018 CJD35_RS07365 803630165f3f08b209e66a843d2c784f 158 Gene3D G3DSA:3.30.70.920 59 153 1.2E-23 T 28-03-2018 CJD35_RS07365 803630165f3f08b209e66a843d2c784f 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 7.8E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS07365 803630165f3f08b209e66a843d2c784f 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 7.8E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS07365 803630165f3f08b209e66a843d2c784f 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 7.8E-12 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS07365 803630165f3f08b209e66a843d2c784f 158 SMART SM00344 7 116 1.4E-35 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CJD35_RS07365 803630165f3f08b209e66a843d2c784f 158 Gene3D G3DSA:1.10.10.10 1 56 3.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07365 803630165f3f08b209e66a843d2c784f 158 SUPERFAMILY SSF54909 72 155 1.61E-18 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS07365 803630165f3f08b209e66a843d2c784f 158 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 4.3E-16 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS07365 803630165f3f08b209e66a843d2c784f 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 25 51 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CJD35_RS07365 803630165f3f08b209e66a843d2c784f 158 SUPERFAMILY SSF46785 6 66 1.83E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07365 803630165f3f08b209e66a843d2c784f 158 Pfam PF01037 Lrp/AsnC ligand binding domain 82 146 1.6E-19 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CJD35_RS17655 be4f1b0744ffd6c4fa447d845f6bd419 331 Pfam PF03060 Nitronate monooxygenase 5 310 1.7E-59 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CJD35_RS17655 be4f1b0744ffd6c4fa447d845f6bd419 331 Gene3D G3DSA:3.20.20.70 2 321 4.9E-62 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS17655 be4f1b0744ffd6c4fa447d845f6bd419 331 SUPERFAMILY SSF51412 2 316 1.96E-69 T 28-03-2018 CJD35_RS18875 3b4c8991fb6ff0c8b2fd7526f44606a4 549 Gene3D G3DSA:3.40.50.720 380 504 1.9E-20 T 28-03-2018 CJD35_RS18875 3b4c8991fb6ff0c8b2fd7526f44606a4 549 Pfam PF00999 Sodium/hydrogen exchanger family 3 354 7.1E-62 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CJD35_RS18875 3b4c8991fb6ff0c8b2fd7526f44606a4 549 Gene3D G3DSA:1.20.91.10 210 297 1.1E-13 T 28-03-2018 CJD35_RS18875 3b4c8991fb6ff0c8b2fd7526f44606a4 549 SUPERFAMILY SSF51735 387 526 1.63E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS18875 3b4c8991fb6ff0c8b2fd7526f44606a4 549 Pfam PF02254 TrkA-N domain 391 504 8.4E-23 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CJD35_RS00685 9e6661d4e7b16050318f7b73eae9f2d6 429 Gene3D G3DSA:1.20.1250.20 15 204 5.6E-25 T 28-03-2018 CJD35_RS00685 9e6661d4e7b16050318f7b73eae9f2d6 429 Pfam PF07690 Major Facilitator Superfamily 26 383 2.9E-35 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS00685 9e6661d4e7b16050318f7b73eae9f2d6 429 Gene3D G3DSA:1.20.1250.20 230 423 3.9E-16 T 28-03-2018 CJD35_RS00685 9e6661d4e7b16050318f7b73eae9f2d6 429 SUPERFAMILY SSF103473 16 421 3.79E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS19145 f5b96844757c9556bb92608050a6ccea 352 SUPERFAMILY SSF51713 60 248 4.97E-11 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CJD35_RS19145 f5b96844757c9556bb92608050a6ccea 352 Gene3D G3DSA:3.20.20.105 34 308 2.1E-22 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CJD35_RS18585 c467c18d32fae02f61eb5933aecfb2a2 330 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 83 137 2.9E-8 T 28-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CJD35_RS07270 5d8a86af06f30cea1db56f18552e8177 332 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 51 312 5.1E-62 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJD35_RS07270 5d8a86af06f30cea1db56f18552e8177 332 Gene3D G3DSA:1.20.1510.10 49 265 8.5E-51 T 28-03-2018 CJD35_RS07270 5d8a86af06f30cea1db56f18552e8177 332 SUPERFAMILY SSF161111 47 266 2.35E-49 T 28-03-2018 CJD35_RS07270 5d8a86af06f30cea1db56f18552e8177 332 Pfam PF01545 Cation efflux family 57 265 3.3E-35 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJD35_RS03265 0fb6386f839b0abb20255e1d1e1b5348 287 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 209 226 - T 28-03-2018 IPR000540 Flagellar motor protein MotA, conserved site CJD35_RS03265 0fb6386f839b0abb20255e1d1e1b5348 287 Pfam PF01618 MotA/TolQ/ExbB proton channel family 142 236 2.3E-10 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CJD35_RS03265 0fb6386f839b0abb20255e1d1e1b5348 287 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 1 285 6.7E-104 T 28-03-2018 IPR022522 Flagellar motor stator, MotA CJD35_RS14225 e8065c4efd15e68a9c312c82dc2630af 149 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 28 1.8E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CJD35_RS14225 e8065c4efd15e68a9c312c82dc2630af 149 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 7 146 1.3E-23 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CJD35_RS14225 e8065c4efd15e68a9c312c82dc2630af 149 Gene3D G3DSA:3.55.40.10 38 148 1.7E-20 T 28-03-2018 CJD35_RS14225 e8065c4efd15e68a9c312c82dc2630af 149 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 28 9.5E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CJD35_RS14225 e8065c4efd15e68a9c312c82dc2630af 149 PRINTS PR00885 Bacterial general secretion pathway protein H signature 19 33 3.6E-5 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CJD35_RS14225 e8065c4efd15e68a9c312c82dc2630af 149 PRINTS PR00885 Bacterial general secretion pathway protein H signature 4 18 3.6E-5 T 28-03-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 CJD35_RS14225 e8065c4efd15e68a9c312c82dc2630af 149 SUPERFAMILY SSF54523 9 135 5.02E-11 T 28-03-2018 CJD35_RS14225 e8065c4efd15e68a9c312c82dc2630af 149 Pfam PF12019 Type II transport protein GspH 43 143 3.5E-9 T 28-03-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 CJD35_RS17320 997700ca887c4d7130ccaff5097ec8ec 305 Gene3D G3DSA:3.60.15.10 20 305 1.7E-53 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS17320 997700ca887c4d7130ccaff5097ec8ec 305 Pfam PF00753 Metallo-beta-lactamase superfamily 31 222 2.3E-21 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS17320 997700ca887c4d7130ccaff5097ec8ec 305 SMART SM00849 32 222 7.2E-24 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS17320 997700ca887c4d7130ccaff5097ec8ec 305 SUPERFAMILY SSF56281 26 304 6.55E-49 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 Pfam PF00364 Biotin-requiring enzyme 580 645 1.3E-15 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 SUPERFAMILY SSF51246 336 469 2.7E-26 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 SUPERFAMILY SSF52440 1 113 7.91E-48 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 SMART SM00878 341 467 5.0E-34 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 Gene3D G3DSA:3.40.50.20 1 123 1.8E-52 T 28-03-2018 CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 602 619 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 Gene3D G3DSA:3.30.470.20 210 469 5.6E-98 T 28-03-2018 CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 SUPERFAMILY SSF56059 83 353 6.19E-69 T 28-03-2018 CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 Gene3D G3DSA:3.30.1490.20 124 209 3.4E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 SUPERFAMILY SSF51230 574 646 1.31E-19 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 328 7.2E-73 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 Pfam PF02785 Biotin carboxylase C-terminal domain 341 468 1.1E-24 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 1.6E-44 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 291 298 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CJD35_RS11295 e9776f15578e62b4eebd43ddb619e7da 650 Gene3D G3DSA:2.40.50.100 576 647 1.1E-19 T 28-03-2018 CJD35_RS20485 dd3028a3789d5baa69d0d48c258d06a9 911 SMART SM00421 847 904 3.1E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS20485 dd3028a3789d5baa69d0d48c258d06a9 911 Pfam PF00196 Bacterial regulatory proteins, luxR family 849 902 1.3E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS20485 dd3028a3789d5baa69d0d48c258d06a9 911 Gene3D G3DSA:3.40.50.300 31 189 1.5E-8 T 28-03-2018 CJD35_RS20485 dd3028a3789d5baa69d0d48c258d06a9 911 Gene3D G3DSA:1.10.10.10 851 909 6.7E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS20485 dd3028a3789d5baa69d0d48c258d06a9 911 SUPERFAMILY SSF46894 842 910 4.42E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS20485 dd3028a3789d5baa69d0d48c258d06a9 911 SUPERFAMILY SSF52540 48 194 8.4E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20485 dd3028a3789d5baa69d0d48c258d06a9 911 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 880 892 9.1E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS20485 dd3028a3789d5baa69d0d48c258d06a9 911 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 850 864 9.1E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS20485 dd3028a3789d5baa69d0d48c258d06a9 911 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 864 880 9.1E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS20485 dd3028a3789d5baa69d0d48c258d06a9 911 Gene3D G3DSA:1.25.40.10 648 850 3.3E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS02070 8ebd58ae6c0fd3c0c5f500b1f11103b6 210 SUPERFAMILY SSF46785 67 181 2.03E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02070 8ebd58ae6c0fd3c0c5f500b1f11103b6 210 Pfam PF03551 Transcriptional regulator PadR-like family 71 140 6.5E-16 T 28-03-2018 IPR005149 Transcription regulator PadR, N-terminal CJD35_RS02070 8ebd58ae6c0fd3c0c5f500b1f11103b6 210 Gene3D G3DSA:1.10.10.10 57 165 1.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10355 2a6d0aaa7080ce81a68ca40f7a0fb521 197 Gene3D G3DSA:1.10.10.10 84 155 1.1E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10355 2a6d0aaa7080ce81a68ca40f7a0fb521 197 Gene3D G3DSA:1.10.10.10 1 83 1.7E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10355 2a6d0aaa7080ce81a68ca40f7a0fb521 197 Pfam PF04079 Segregation and condensation complex subunit ScpB 11 164 1.2E-47 T 28-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CJD35_RS10355 2a6d0aaa7080ce81a68ca40f7a0fb521 197 PIRSF PIRSF019345 1 196 1.3E-50 T 28-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CJD35_RS10355 2a6d0aaa7080ce81a68ca40f7a0fb521 197 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 10 167 5.1E-30 T 28-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 CJD35_RS10355 2a6d0aaa7080ce81a68ca40f7a0fb521 197 SUPERFAMILY SSF46785 5 77 3.26E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10355 2a6d0aaa7080ce81a68ca40f7a0fb521 197 SUPERFAMILY SSF46785 82 156 8.52E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16805 06fba9161ea004c456f4229e14cb054f 224 Pfam PF03737 Aldolase/RraA 28 172 8.5E-39 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CJD35_RS16805 06fba9161ea004c456f4229e14cb054f 224 SUPERFAMILY SSF89562 23 184 4.45E-49 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CJD35_RS16805 06fba9161ea004c456f4229e14cb054f 224 Gene3D G3DSA:3.50.30.40 18 193 1.0E-51 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CJD35_RS16805 06fba9161ea004c456f4229e14cb054f 224 TIGRFAM TIGR02798 ligK_PcmE: 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase 3 224 2.1E-127 T 28-03-2018 IPR014165 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase KEGG: 00362+4.1.3.17|KEGG: 00660+4.1.3.17|MetaCyc: PWY-7701 CJD35_RS12450 958cca5bb37f90c56b036c2a0cc83800 59 SUPERFAMILY SSF53850 1 58 3.08E-6 T 28-03-2018 CJD35_RS17035 3363f8bdae343464916aa45a24015a2c 470 Pfam PF01381 Helix-turn-helix 10 62 1.8E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS17035 3363f8bdae343464916aa45a24015a2c 470 Gene3D G3DSA:1.10.260.40 1 79 1.1E-15 T 28-03-2018 CJD35_RS17035 3363f8bdae343464916aa45a24015a2c 470 SMART SM00530 9 64 1.2E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS17035 3363f8bdae343464916aa45a24015a2c 470 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 311 467 1.5E-72 T 28-03-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator CJD35_RS17035 3363f8bdae343464916aa45a24015a2c 470 PIRSF PIRSF019251 1 470 3.2E-192 T 28-03-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 CJD35_RS17035 3363f8bdae343464916aa45a24015a2c 470 Pfam PF06114 IrrE N-terminal-like domain 186 310 7.3E-22 T 28-03-2018 IPR010359 IrrE N-terminal-like domain CJD35_RS17035 3363f8bdae343464916aa45a24015a2c 470 SUPERFAMILY SSF47413 4 68 3.22E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 Pfam PF00633 Helix-hairpin-helix motif 100 126 5.1E-8 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 Hamap MF_00942 Endonuclease III [nth]. 1 209 35.672 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 2.7E-17 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 TIGRFAM TIGR01083 nth: endonuclease III 6 194 1.6E-78 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 Gene3D G3DSA:1.10.340.30 9 117 3.3E-23 T 28-03-2018 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 SUPERFAMILY SSF48150 4 206 9.58E-70 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 Gene3D G3DSA:1.10.1670.10 118 211 6.4E-31 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 SMART SM00525 186 206 4.3E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.7E-6 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 SMART SM00478 38 185 6.0E-50 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 PIRSF PIRSF001435 1 210 1.9E-48 T 28-03-2018 CJD35_RS00545 20ddd2548fd95a14fc4b3debfb98440b 213 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CJD35_RS20070 441243c52746b7fac59eed78f5a7fd63 154 Pfam PF05284 Protein of unknown function (DUF736) 2 104 1.7E-22 T 28-03-2018 IPR007948 Protein of unknown function DUF736 CJD35_RS06330 25812ba850bc1eadfd4d6b0addce3e4a 204 SMART SM00882 1 197 9.9E-77 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS06330 25812ba850bc1eadfd4d6b0addce3e4a 204 Pfam PF01144 Coenzyme A transferase 1 195 1.9E-41 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS06330 25812ba850bc1eadfd4d6b0addce3e4a 204 SUPERFAMILY SSF100950 1 202 2.65E-71 T 28-03-2018 CJD35_RS06330 25812ba850bc1eadfd4d6b0addce3e4a 204 Gene3D G3DSA:3.40.1080.10 1 204 7.9E-70 T 28-03-2018 CJD35_RS06330 25812ba850bc1eadfd4d6b0addce3e4a 204 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 1 202 8.0E-95 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CJD35_RS02475 57cf3904db77285c1ff205f1d40587b6 109 SUPERFAMILY SSF141371 14 93 5.69E-7 T 28-03-2018 CJD35_RS02475 57cf3904db77285c1ff205f1d40587b6 109 Gene3D G3DSA:2.40.10.220 10 105 4.3E-8 T 28-03-2018 CJD35_RS02475 57cf3904db77285c1ff205f1d40587b6 109 Pfam PF07238 PilZ domain 14 102 6.0E-7 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CJD35_RS21100 4a7527767f28d80cc73d3469b725892a 83 SUPERFAMILY SSF47413 7 67 6.48E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS21100 4a7527767f28d80cc73d3469b725892a 83 Pfam PF01381 Helix-turn-helix 11 59 1.4E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS21100 4a7527767f28d80cc73d3469b725892a 83 Gene3D G3DSA:1.10.260.40 31 72 4.9E-4 T 28-03-2018 CJD35_RS21100 4a7527767f28d80cc73d3469b725892a 83 Gene3D G3DSA:1.10.10.60 4 30 4.2E-10 T 28-03-2018 CJD35_RS21100 4a7527767f28d80cc73d3469b725892a 83 SMART SM00530 8 63 3.4E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS20815 5d2b022b56c7cea9783b17c2e75ddfba 985 Pfam PF01526 Tn3 transposase DDE domain 579 960 9.9E-138 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS20815 5d2b022b56c7cea9783b17c2e75ddfba 985 Pfam PF13700 Domain of unknown function (DUF4158) 13 169 1.2E-42 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CJD35_RS06625 96f90edfe46a28ad29cf11c8b97b8a41 493 Gene3D G3DSA:1.20.1600.10 24 434 1.6E-69 T 28-03-2018 CJD35_RS06625 96f90edfe46a28ad29cf11c8b97b8a41 493 Pfam PF02321 Outer membrane efflux protein 35 219 2.8E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS06625 96f90edfe46a28ad29cf11c8b97b8a41 493 Pfam PF02321 Outer membrane efflux protein 239 430 7.1E-32 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS06625 96f90edfe46a28ad29cf11c8b97b8a41 493 SUPERFAMILY SSF56954 5 432 1.7E-79 T 28-03-2018 CJD35_RS06625 96f90edfe46a28ad29cf11c8b97b8a41 493 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 31 445 1.6E-82 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CJD35_RS04275 04d90ff743d3edb99ceb431d3efc29a9 197 Gene3D G3DSA:3.40.50.150 2 192 2.0E-17 T 28-03-2018 CJD35_RS04275 04d90ff743d3edb99ceb431d3efc29a9 197 SUPERFAMILY SSF53335 9 179 2.79E-25 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS04275 04d90ff743d3edb99ceb431d3efc29a9 197 Pfam PF07021 Methionine biosynthesis protein MetW 6 195 1.2E-70 T 28-03-2018 IPR010743 Methionine biosynthesis MetW CJD35_RS04275 04d90ff743d3edb99ceb431d3efc29a9 197 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 6 195 1.4E-68 T 28-03-2018 IPR010743 Methionine biosynthesis MetW CJD35_RS14760 a4a04cdb3edaa95e182d43c86f7003cb 455 SUPERFAMILY SSF53187 23 210 2.31E-47 T 28-03-2018 CJD35_RS14760 a4a04cdb3edaa95e182d43c86f7003cb 455 SUPERFAMILY SSF53187 366 453 2.31E-47 T 28-03-2018 CJD35_RS14760 a4a04cdb3edaa95e182d43c86f7003cb 455 Pfam PF07687 Peptidase dimerisation domain 208 351 2.7E-14 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS14760 a4a04cdb3edaa95e182d43c86f7003cb 455 Gene3D G3DSA:3.30.70.360 214 359 3.1E-20 T 28-03-2018 CJD35_RS14760 a4a04cdb3edaa95e182d43c86f7003cb 455 SUPERFAMILY SSF55031 214 259 1.96E-9 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS14760 a4a04cdb3edaa95e182d43c86f7003cb 455 SUPERFAMILY SSF55031 304 354 1.96E-9 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS14760 a4a04cdb3edaa95e182d43c86f7003cb 455 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 93 102 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CJD35_RS14760 a4a04cdb3edaa95e182d43c86f7003cb 455 Gene3D G3DSA:3.40.630.10 18 213 1.2E-35 T 28-03-2018 CJD35_RS14760 a4a04cdb3edaa95e182d43c86f7003cb 455 Pfam PF01546 Peptidase family M20/M25/M40 95 439 3.7E-28 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CJD35_RS01080 988b9a3e280d5abb88d2aed799559519 461 SUPERFAMILY SSF51556 105 403 3.4E-22 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS01080 988b9a3e280d5abb88d2aed799559519 461 SUPERFAMILY SSF51338 402 439 8.65E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS01080 988b9a3e280d5abb88d2aed799559519 461 SUPERFAMILY SSF51338 50 106 8.65E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS01080 988b9a3e280d5abb88d2aed799559519 461 Gene3D G3DSA:3.20.20.140 122 419 5.0E-26 T 28-03-2018 CJD35_RS01080 988b9a3e280d5abb88d2aed799559519 461 Pfam PF01979 Amidohydrolase family 102 433 2.3E-9 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS01080 988b9a3e280d5abb88d2aed799559519 461 Gene3D G3DSA:2.30.40.10 49 121 1.2E-16 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS14725 8e4b4182dd75113e3ac5a096b27bc4f5 314 Gene3D G3DSA:1.10.287.890 207 288 6.0E-24 T 28-03-2018 CJD35_RS14725 8e4b4182dd75113e3ac5a096b27bc4f5 314 Pfam PF01715 IPP transferase 48 289 1.7E-62 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CJD35_RS14725 8e4b4182dd75113e3ac5a096b27bc4f5 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 16 288 1.4E-71 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CJD35_RS14725 8e4b4182dd75113e3ac5a096b27bc4f5 314 SUPERFAMILY SSF52540 16 152 2.15E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14725 8e4b4182dd75113e3ac5a096b27bc4f5 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 15 305 24.705 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CJD35_RS14725 8e4b4182dd75113e3ac5a096b27bc4f5 314 Gene3D G3DSA:3.40.50.300 11 196 5.9E-50 T 28-03-2018 CJD35_RS10420 a9e1a732e0d40f4182deabb746eb40eb 481 Gene3D G3DSA:3.90.190.20 337 481 2.7E-46 T 28-03-2018 CJD35_RS10420 a9e1a732e0d40f4182deabb746eb40eb 481 Pfam PF01225 Mur ligase family, catalytic domain 25 94 1.8E-6 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CJD35_RS10420 a9e1a732e0d40f4182deabb746eb40eb 481 Gene3D G3DSA:3.40.1390.10 1 99 8.3E-18 T 28-03-2018 CJD35_RS10420 a9e1a732e0d40f4182deabb746eb40eb 481 SUPERFAMILY SSF53244 330 479 2.59E-44 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CJD35_RS10420 a9e1a732e0d40f4182deabb746eb40eb 481 Pfam PF02875 Mur ligase family, glutamate ligase domain 330 415 7.8E-22 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CJD35_RS10420 a9e1a732e0d40f4182deabb746eb40eb 481 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 479 1.9E-131 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CJD35_RS10420 a9e1a732e0d40f4182deabb746eb40eb 481 SUPERFAMILY SSF53623 104 329 1.04E-65 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS10420 a9e1a732e0d40f4182deabb746eb40eb 481 SUPERFAMILY SSF63418 11 97 4.19E-17 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CJD35_RS10420 a9e1a732e0d40f4182deabb746eb40eb 481 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 480 30.286 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CJD35_RS10420 a9e1a732e0d40f4182deabb746eb40eb 481 Gene3D G3DSA:3.40.1190.10 103 334 5.5E-50 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS10420 a9e1a732e0d40f4182deabb746eb40eb 481 Pfam PF08245 Mur ligase middle domain 107 309 3.3E-44 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS16770 6bae3886778da7278d2cfbde6c3408d0 300 SUPERFAMILY SSF53474 81 297 3.95E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS16770 6bae3886778da7278d2cfbde6c3408d0 300 Gene3D G3DSA:3.40.50.1820 72 297 2.6E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS16770 6bae3886778da7278d2cfbde6c3408d0 300 Pfam PF01738 Dienelactone hydrolase family 89 298 3.6E-49 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CJD35_RS16650 9e78b4b3ab5a886a2c561850e91f6291 172 Gene3D G3DSA:3.10.450.50 35 162 9.3E-16 T 28-03-2018 CJD35_RS16650 9e78b4b3ab5a886a2c561850e91f6291 172 SUPERFAMILY SSF54427 42 152 2.55E-17 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS16650 9e78b4b3ab5a886a2c561850e91f6291 172 Pfam PF12680 SnoaL-like domain 51 150 5.0E-8 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS03705 a0335a5b1dea2e8c512bed9ff621a074 269 SUPERFAMILY SSF56655 4 260 1.22E-71 T 28-03-2018 CJD35_RS03705 a0335a5b1dea2e8c512bed9ff621a074 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 5.8E-19 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS03705 a0335a5b1dea2e8c512bed9ff621a074 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 5.8E-19 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS03705 a0335a5b1dea2e8c512bed9ff621a074 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 5.8E-19 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS03705 a0335a5b1dea2e8c512bed9ff621a074 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 5.8E-19 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS03705 a0335a5b1dea2e8c512bed9ff621a074 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 5.8E-19 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS03705 a0335a5b1dea2e8c512bed9ff621a074 269 Pfam PF00459 Inositol monophosphatase family 8 245 1.5E-47 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS03705 a0335a5b1dea2e8c512bed9ff621a074 269 Gene3D G3DSA:3.40.190.80 144 269 3.7E-20 T 28-03-2018 CJD35_RS03705 a0335a5b1dea2e8c512bed9ff621a074 269 Gene3D G3DSA:3.30.540.10 1 143 2.3E-44 T 28-03-2018 CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 SUPERFAMILY SSF46565 2 107 1.28E-26 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 SUPERFAMILY SSF49493 202 277 3.4E-18 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 SUPERFAMILY SSF49493 128 208 1.2E-15 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 SMART SM00271 2 60 4.9E-25 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 Pfam PF00226 DnaJ domain 3 65 1.5E-23 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 Pfam PF01556 DnaJ C terminal domain 134 276 3.9E-31 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 28-03-2018 IPR018253 DnaJ domain, conserved site CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 Gene3D G3DSA:1.10.287.110 1 120 2.4E-27 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 PRINTS PR00625 DnaJ domain signature 23 38 1.4E-17 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 PRINTS PR00625 DnaJ domain signature 5 23 1.4E-17 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 PRINTS PR00625 DnaJ domain signature 40 60 1.4E-17 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 Gene3D G3DSA:2.60.260.20 199 299 5.1E-24 T 28-03-2018 CJD35_RS07175 044725fb0f5a1142d0f578ed659af7a4 301 Gene3D G3DSA:2.60.260.20 125 198 8.7E-13 T 28-03-2018 CJD35_RS06620 74fcfe6c106b2814cd85bceeba1b81d0 440 Pfam PF07486 Cell Wall Hydrolase 153 259 3.4E-22 T 28-03-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 SUPERFAMILY SSF55874 16 219 2.23E-58 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 15 648 8.2E-229 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 Gene3D G3DSA:3.30.565.10 13 280 1.1E-65 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 580 645 1.1E-23 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 528 544 4.6E-9 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 40 53 4.6E-9 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 188 205 4.6E-9 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 358 381 4.6E-9 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 472 493 4.6E-9 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR01098 Topoisomerase IV subunit B signature 606 620 4.6E-9 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 Gene3D G3DSA:3.30.230.10 281 394 1.5E-28 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 SMART SM00433 45 649 1.0E-268 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 ProSitePatterns PS00177 DNA topoisomerase II signature. 440 448 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 SUPERFAMILY SSF54211 238 407 2.47E-39 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 SUPERFAMILY SSF56719 417 649 2.41E-77 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 Pfam PF00204 DNA gyrase B 238 407 2.7E-38 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 13 653 42.499 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 41 185 7.5E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR00418 DNA topoisomerase II family signature 124 138 1.2E-63 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR00418 DNA topoisomerase II family signature 504 520 1.2E-63 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR00418 DNA topoisomerase II family signature 522 539 1.2E-63 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR00418 DNA topoisomerase II family signature 287 300 1.2E-63 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR00418 DNA topoisomerase II family signature 438 452 1.2E-63 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR00418 DNA topoisomerase II family signature 584 600 1.2E-63 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR00418 DNA topoisomerase II family signature 542 554 1.2E-63 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR00418 DNA topoisomerase II family signature 80 93 1.2E-63 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 PRINTS PR00418 DNA topoisomerase II family signature 45 60 1.2E-63 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 Pfam PF01751 Toprim domain 437 544 6.4E-16 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 SMART SM00387 41 187 3.6E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS13935 753170f62086847c9201176fc6bbb24a 658 Gene3D G3DSA:3.40.50.670 417 653 1.9E-88 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CJD35_RS06385 170e4414b85f5fb364c15d63bcad8ae0 276 SUPERFAMILY SSF56281 4 249 3.01E-30 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS06385 170e4414b85f5fb364c15d63bcad8ae0 276 Pfam PF00753 Metallo-beta-lactamase superfamily 24 186 3.7E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS06385 170e4414b85f5fb364c15d63bcad8ae0 276 SMART SM00849 26 243 1.5E-10 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS06385 170e4414b85f5fb364c15d63bcad8ae0 276 Gene3D G3DSA:3.60.15.10 5 255 2.1E-27 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS09685 52642e567590959be13f959a9ffa50cb 120 Pfam PF05239 PRC-barrel domain 13 86 3.5E-17 T 28-03-2018 IPR027275 PRC-barrel domain CJD35_RS09685 52642e567590959be13f959a9ffa50cb 120 Gene3D G3DSA:3.90.50.10 2 120 2.4E-34 T 28-03-2018 CJD35_RS09685 52642e567590959be13f959a9ffa50cb 120 SUPERFAMILY SSF50346 4 120 1.96E-27 T 28-03-2018 IPR011033 PRC-barrel-like CJD35_RS13345 3819f25c2536aec91fa01c64d6d80ac6 329 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 46 180 8.1E-63 T 28-03-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 CJD35_RS13345 3819f25c2536aec91fa01c64d6d80ac6 329 PIRSF PIRSF002849 1 329 2.7E-121 T 28-03-2018 CJD35_RS13345 3819f25c2536aec91fa01c64d6d80ac6 329 Gene3D G3DSA:3.40.50.300 27 197 8.8E-27 T 28-03-2018 CJD35_RS13345 3819f25c2536aec91fa01c64d6d80ac6 329 Gene3D G3DSA:1.10.8.300 210 326 1.0E-28 T 28-03-2018 CJD35_RS13345 3819f25c2536aec91fa01c64d6d80ac6 329 SUPERFAMILY SSF52540 12 301 2.46E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 Gene3D G3DSA:3.90.79.10 235 359 4.2E-4 T 28-03-2018 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 202 218 2.1E-6 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 Gene3D G3DSA:1.10.1670.10 130 234 3.7E-37 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 Gene3D G3DSA:1.10.340.30 28 129 7.8E-34 T 28-03-2018 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 202 218 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 SMART SM00478 51 200 6.3E-50 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 SMART SM00525 201 221 7.8E-6 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 SUPERFAMILY SSF55811 230 350 1.8E-20 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 Pfam PF14815 NUDIX domain 246 348 1.4E-20 T 28-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 Pfam PF00633 Helix-hairpin-helix motif 112 140 1.8E-7 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 SUPERFAMILY SSF48150 14 232 3.45E-70 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 ProSitePatterns PS01155 Endonuclease III family signature. 114 143 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CJD35_RS04830 5566fb7eed9ea3653bf5e51230c15601 360 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 48 166 1.9E-18 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CJD35_RS07570 75115294bb9b476138fef2e8ea1cb192 226 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 1.9E-9 T 28-03-2018 CJD35_RS07570 75115294bb9b476138fef2e8ea1cb192 226 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 1.9E-9 T 28-03-2018 CJD35_RS07570 75115294bb9b476138fef2e8ea1cb192 226 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 1.9E-9 T 28-03-2018 CJD35_RS07570 75115294bb9b476138fef2e8ea1cb192 226 SUPERFAMILY SSF103088 103 218 2.35E-41 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS07570 75115294bb9b476138fef2e8ea1cb192 226 Gene3D G3DSA:3.30.1330.60 83 225 2.6E-45 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS07570 75115294bb9b476138fef2e8ea1cb192 226 Pfam PF00691 OmpA family 115 210 6.6E-24 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS07570 75115294bb9b476138fef2e8ea1cb192 226 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CJD35_RS07570 75115294bb9b476138fef2e8ea1cb192 226 Pfam PF13488 Glycine zipper 38 85 2.9E-7 T 28-03-2018 CJD35_RS07570 75115294bb9b476138fef2e8ea1cb192 226 PRINTS PR01021 OMPA domain signature 161 177 3.8E-18 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJD35_RS07570 75115294bb9b476138fef2e8ea1cb192 226 PRINTS PR01021 OMPA domain signature 146 161 3.8E-18 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJD35_RS07570 75115294bb9b476138fef2e8ea1cb192 226 PRINTS PR01021 OMPA domain signature 116 138 3.8E-18 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CJD35_RS11365 22322f26752f049655e8920818b69862 261 SUPERFAMILY SSF51126 5 229 3.14E-14 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CJD35_RS11365 22322f26752f049655e8920818b69862 261 Gene3D G3DSA:2.160.20.10 4 250 2.6E-15 T 28-03-2018 IPR012334 Pectin lyase fold CJD35_RS12210 c58389f6b7c5bddb9d9a81f99bacec2e 594 SUPERFAMILY SSF51735 421 547 1.75E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS12210 c58389f6b7c5bddb9d9a81f99bacec2e 594 Gene3D G3DSA:3.40.50.720 414 579 4.9E-18 T 28-03-2018 CJD35_RS12210 c58389f6b7c5bddb9d9a81f99bacec2e 594 Pfam PF02254 TrkA-N domain 421 533 7.1E-26 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CJD35_RS12210 c58389f6b7c5bddb9d9a81f99bacec2e 594 Pfam PF00999 Sodium/hydrogen exchanger family 16 389 1.6E-44 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CJD35_RS12210 c58389f6b7c5bddb9d9a81f99bacec2e 594 Gene3D G3DSA:1.20.91.10 245 328 3.1E-8 T 28-03-2018 CJD35_RS14425 e0a834a04835b226860a66949088daee 218 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 30 181 1.6E-51 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14425 e0a834a04835b226860a66949088daee 218 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 31 181 6.8E-58 T 28-03-2018 CJD35_RS14425 e0a834a04835b226860a66949088daee 218 Gene3D G3DSA:3.40.30.10 101 193 3.6E-15 T 28-03-2018 CJD35_RS14425 e0a834a04835b226860a66949088daee 218 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 139 157 - T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14425 e0a834a04835b226860a66949088daee 218 SUPERFAMILY SSF52833 23 197 4.32E-52 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS14425 e0a834a04835b226860a66949088daee 218 PIRSF PIRSF000216 7 217 1.0E-68 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS05400 5ef3c8da645765807a0c2d8747acd567 72 SUPERFAMILY SSF46955 17 68 5.49E-7 T 28-03-2018 IPR009061 Putative DNA-binding domain CJD35_RS05400 5ef3c8da645765807a0c2d8747acd567 72 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 17 66 2.0E-22 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CJD35_RS05400 5ef3c8da645765807a0c2d8747acd567 72 Gene3D G3DSA:1.10.10.10 10 71 2.2E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS04865 09fe17e41677c1620ba19ad13a7587aa 491 SMART SM00155 131 158 0.45 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CJD35_RS04865 09fe17e41677c1620ba19ad13a7587aa 491 SMART SM00155 345 372 2.2E-5 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CJD35_RS04865 09fe17e41677c1620ba19ad13a7587aa 491 Pfam PF13091 PLD-like domain 259 386 1.6E-12 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CJD35_RS04865 09fe17e41677c1620ba19ad13a7587aa 491 Pfam PF00614 Phospholipase D Active site motif 134 158 1.1E-5 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CJD35_RS04865 09fe17e41677c1620ba19ad13a7587aa 491 Gene3D G3DSA:3.30.870.10 12 239 1.2E-20 T 28-03-2018 CJD35_RS04865 09fe17e41677c1620ba19ad13a7587aa 491 Gene3D G3DSA:3.30.870.10 249 425 8.5E-26 T 28-03-2018 CJD35_RS04865 09fe17e41677c1620ba19ad13a7587aa 491 SUPERFAMILY SSF56024 13 243 2.98E-28 T 28-03-2018 CJD35_RS04865 09fe17e41677c1620ba19ad13a7587aa 491 SUPERFAMILY SSF56024 253 397 7.85E-24 T 28-03-2018 CJD35_RS09465 70f71834a0c58e658bffd1e1ed140194 391 Gene3D G3DSA:3.40.50.150 184 391 4.4E-47 T 28-03-2018 CJD35_RS09465 70f71834a0c58e658bffd1e1ed140194 391 Gene3D G3DSA:3.30.70.1170 130 183 1.1E-9 T 28-03-2018 CJD35_RS09465 70f71834a0c58e658bffd1e1ed140194 391 SUPERFAMILY SSF53335 121 389 1.77E-55 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS09465 70f71834a0c58e658bffd1e1ed140194 391 Pfam PF01189 16S rRNA methyltransferase RsmB/F 198 388 2.6E-36 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS09465 70f71834a0c58e658bffd1e1ed140194 391 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 175 189 1.3E-25 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS09465 70f71834a0c58e658bffd1e1ed140194 391 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 324 340 1.3E-25 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS09465 70f71834a0c58e658bffd1e1ed140194 391 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 372 389 1.3E-25 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS09465 70f71834a0c58e658bffd1e1ed140194 391 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 204 214 1.3E-25 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS09465 70f71834a0c58e658bffd1e1ed140194 391 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 274 286 1.3E-25 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS04835 4d4269d5dd2d5dd0d65ab0a3b192ebcb 180 Pfam PF05258 Protein of unknown function (DUF721) 29 119 3.6E-14 T 28-03-2018 IPR007922 Protein of unknown function DUF721/UPF0232 CJD35_RS04835 4d4269d5dd2d5dd0d65ab0a3b192ebcb 180 PIRSF PIRSF032064 2 174 1.8E-25 T 28-03-2018 IPR010593 Protein of unknown function DUF1159 CJD35_RS05160 f08920168b2617481c06daf95c6de61e 614 Gene3D G3DSA:1.10.10.730 106 153 9.9E-4 T 28-03-2018 CJD35_RS05160 f08920168b2617481c06daf95c6de61e 614 SUPERFAMILY SSF110849 5 108 1.08E-14 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS05160 f08920168b2617481c06daf95c6de61e 614 SUPERFAMILY SSF109709 99 193 1.96E-15 T 28-03-2018 CJD35_RS05160 f08920168b2617481c06daf95c6de61e 614 SMART SM00470 4 106 2.8E-11 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS05160 f08920168b2617481c06daf95c6de61e 614 Gene3D G3DSA:3.90.1530.10 1 105 7.0E-21 T 28-03-2018 CJD35_RS05160 f08920168b2617481c06daf95c6de61e 614 Pfam PF02195 ParB-like nuclease domain 6 105 5.0E-13 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS16680 836e13bd1d1724896632d5f5488e52e6 540 SUPERFAMILY SSF51905 5 291 9.44E-83 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16680 836e13bd1d1724896632d5f5488e52e6 540 SUPERFAMILY SSF51905 478 536 9.44E-83 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16680 836e13bd1d1724896632d5f5488e52e6 540 Gene3D G3DSA:4.10.450.10 40 107 2.9E-24 T 28-03-2018 CJD35_RS16680 836e13bd1d1724896632d5f5488e52e6 540 Pfam PF05199 GMC oxidoreductase 393 529 4.0E-43 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS16680 836e13bd1d1724896632d5f5488e52e6 540 PIRSF PIRSF000137 1 538 2.5E-143 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS16680 836e13bd1d1724896632d5f5488e52e6 540 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS16680 836e13bd1d1724896632d5f5488e52e6 540 Pfam PF00732 GMC oxidoreductase 7 298 1.4E-80 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS16680 836e13bd1d1724896632d5f5488e52e6 540 SUPERFAMILY SSF54373 293 479 4.51E-40 T 28-03-2018 CJD35_RS16680 836e13bd1d1724896632d5f5488e52e6 540 Gene3D G3DSA:3.30.560.10 108 491 5.0E-94 T 28-03-2018 CJD35_RS16680 836e13bd1d1724896632d5f5488e52e6 540 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 257 271 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 240 253 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 35 482 34.063 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 Gene3D G3DSA:1.10.1390.10 470 500 1.2E-10 T 28-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 455 472 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 Pfam PF00342 Phosphoglucose isomerase 41 494 3.5E-167 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 PRINTS PR00662 Glucose-6-phosphate isomerase signature 127 146 5.5E-40 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 PRINTS PR00662 Glucose-6-phosphate isomerase signature 313 334 5.5E-40 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 PRINTS PR00662 Glucose-6-phosphate isomerase signature 441 455 5.5E-40 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 PRINTS PR00662 Glucose-6-phosphate isomerase signature 236 254 5.5E-40 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 PRINTS PR00662 Glucose-6-phosphate isomerase signature 423 441 5.5E-40 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 PRINTS PR00662 Glucose-6-phosphate isomerase signature 455 468 5.5E-40 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 Gene3D G3DSA:3.40.50.10490 4 119 2.1E-23 T 28-03-2018 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 SUPERFAMILY SSF53697 13 498 6.39E-148 T 28-03-2018 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 Gene3D G3DSA:3.40.50.10490 120 233 2.9E-27 T 28-03-2018 CJD35_RS12935 4cdac56bffebcc8c7bb3fb052673062b 501 Gene3D G3DSA:3.40.50.10490 234 469 1.4E-88 T 28-03-2018 CJD35_RS06265 eb2bbc8fb8fe538464aaa854488b5f76 473 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 185 1.2E-61 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS06265 eb2bbc8fb8fe538464aaa854488b5f76 473 SUPERFAMILY SSF48179 187 294 1.02E-25 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS06265 eb2bbc8fb8fe538464aaa854488b5f76 473 Gene3D G3DSA:1.10.1040.10 393 473 2.7E-10 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS06265 eb2bbc8fb8fe538464aaa854488b5f76 473 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 284 6.1E-23 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS06265 eb2bbc8fb8fe538464aaa854488b5f76 473 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 393 472 7.2E-11 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CJD35_RS06265 eb2bbc8fb8fe538464aaa854488b5f76 473 Gene3D G3DSA:1.10.1040.10 187 289 2.4E-22 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS06265 eb2bbc8fb8fe538464aaa854488b5f76 473 Gene3D G3DSA:3.40.50.720 3 186 1.3E-52 T 28-03-2018 CJD35_RS06265 eb2bbc8fb8fe538464aaa854488b5f76 473 SUPERFAMILY SSF51735 6 187 2.17E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06265 eb2bbc8fb8fe538464aaa854488b5f76 473 SUPERFAMILY SSF48179 392 472 1.7E-12 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 Gene3D G3DSA:3.30.9.10 210 256 6.9E-5 T 28-03-2018 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 Gene3D G3DSA:3.50.50.60 97 209 1.9E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 305 1.4E-65 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 SUPERFAMILY SSF51905 1 315 7.5E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 SUPERFAMILY SSF55424 317 408 4.26E-27 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.4E-27 T 28-03-2018 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.4E-27 T 28-03-2018 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 1.4E-27 T 28-03-2018 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.4E-27 T 28-03-2018 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 1.4E-27 T 28-03-2018 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 Pfam PF14759 Reductase C-terminal 324 408 1.0E-26 T 28-03-2018 IPR028202 Reductase, C-terminal CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 Gene3D G3DSA:3.30.390.30 329 410 1.2E-25 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 Gene3D G3DSA:3.50.50.60 257 328 3.9E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 6.7E-22 T 28-03-2018 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.7E-22 T 28-03-2018 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 173 6.7E-22 T 28-03-2018 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 6.7E-22 T 28-03-2018 CJD35_RS19665 8b4403443810f4629f3cecb76da9e3fc 410 Gene3D G3DSA:3.50.50.60 1 96 6.8E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 Gene3D G3DSA:3.20.20.10 26 247 2.4E-40 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 266 346 2.3E-6 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 45 63 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 35 261 4.6E-36 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 SUPERFAMILY SSF50621 228 379 1.49E-34 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 66 78 1.1E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 350 363 1.1E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 45 63 1.1E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 251 270 1.1E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 170 183 1.1E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 SUPERFAMILY SSF51419 19 262 1.89E-45 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 Gene3D G3DSA:2.40.37.10 248 393 4.2E-26 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CJD35_RS12845 3b6b3f43905e89ebedd887830bc73643 396 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 204 218 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CJD35_RS22230 8ebfd080c3a36e19f4a50b944bcd24af 257 SUPERFAMILY SSF53335 56 212 5.93E-19 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS22230 8ebfd080c3a36e19f4a50b944bcd24af 257 Pfam PF08241 Methyltransferase domain 76 168 9.3E-8 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CJD35_RS22230 8ebfd080c3a36e19f4a50b944bcd24af 257 Gene3D G3DSA:3.40.50.150 32 221 1.1E-16 T 28-03-2018 CJD35_RS12925 6ed043b0f9d2de4b122ec3b9017c39be 227 Hamap MF_00104 Ribonuclease 3 [rnc]. 14 222 25.107 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CJD35_RS12925 6ed043b0f9d2de4b122ec3b9017c39be 227 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CJD35_RS12925 6ed043b0f9d2de4b122ec3b9017c39be 227 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 22 225 1.3E-63 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CJD35_RS12925 6ed043b0f9d2de4b122ec3b9017c39be 227 SMART SM00358 159 226 1.1E-21 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain CJD35_RS12925 6ed043b0f9d2de4b122ec3b9017c39be 227 Gene3D G3DSA:3.30.160.20 158 227 9.6E-19 T 28-03-2018 CJD35_RS12925 6ed043b0f9d2de4b122ec3b9017c39be 227 Gene3D G3DSA:1.10.1520.10 2 155 6.3E-39 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CJD35_RS12925 6ed043b0f9d2de4b122ec3b9017c39be 227 SMART SM00535 26 154 2.5E-41 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CJD35_RS12925 6ed043b0f9d2de4b122ec3b9017c39be 227 Pfam PF14622 Ribonuclease-III-like 28 145 5.3E-26 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CJD35_RS12925 6ed043b0f9d2de4b122ec3b9017c39be 227 Pfam PF00035 Double-stranded RNA binding motif 159 225 2.0E-12 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain CJD35_RS12925 6ed043b0f9d2de4b122ec3b9017c39be 227 SUPERFAMILY SSF54768 114 225 3.93E-24 T 28-03-2018 CJD35_RS12925 6ed043b0f9d2de4b122ec3b9017c39be 227 SUPERFAMILY SSF69065 13 152 1.74E-39 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 234 250 2.7E-48 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 216 233 2.7E-48 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 140 153 2.7E-48 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 323 349 2.7E-48 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 164 192 2.7E-48 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 PIRSF PIRSF000110 2 487 1.7E-165 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 Gene3D G3DSA:3.30.360.10 186 487 6.2E-123 T 28-03-2018 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 SUPERFAMILY SSF55347 179 486 4.58E-111 T 28-03-2018 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 10 184 1.9E-50 T 28-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 186 486 4.2E-112 T 28-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 Gene3D G3DSA:3.40.50.720 3 185 1.9E-58 T 28-03-2018 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 6 486 1.8E-163 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 5 487 81.059 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 174 180 - T 28-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CJD35_RS00485 3ccb39b254031ac31552bd6c59096b39 487 SUPERFAMILY SSF51735 5 187 1.67E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS12880 e0777c1c9609a1bad34382831e553966 214 Gene3D G3DSA:3.40.50.150 4 208 7.6E-31 T 28-03-2018 CJD35_RS12880 e0777c1c9609a1bad34382831e553966 214 Pfam PF13649 Methyltransferase domain 45 145 9.0E-18 T 28-03-2018 CJD35_RS12880 e0777c1c9609a1bad34382831e553966 214 SUPERFAMILY SSF53335 4 172 5.68E-34 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS16580 c2e8a23d63785004026c3f36a9799f75 285 Pfam PF13673 Acetyltransferase (GNAT) domain 47 134 6.3E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS16580 c2e8a23d63785004026c3f36a9799f75 285 Gene3D G3DSA:3.40.630.30 145 283 2.5E-5 T 28-03-2018 CJD35_RS16580 c2e8a23d63785004026c3f36a9799f75 285 SUPERFAMILY SSF55729 8 264 2.22E-43 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS16580 c2e8a23d63785004026c3f36a9799f75 285 Gene3D G3DSA:3.40.630.30 1 133 3.6E-25 T 28-03-2018 CJD35_RS01135 23d12a10e72a826bc17badca3760dfc2 503 Pfam PF07568 Histidine kinase 312 385 4.4E-18 T 28-03-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain CJD35_RS01135 23d12a10e72a826bc17badca3760dfc2 503 Gene3D G3DSA:3.30.565.10 297 480 0.002 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS07815 10908f3c3782259f72bf803346791db1 498 Gene3D G3DSA:3.90.76.10 56 164 2.9E-13 T 28-03-2018 CJD35_RS07815 10908f3c3782259f72bf803346791db1 498 Gene3D G3DSA:3.10.105.10 284 465 1.4E-8 T 28-03-2018 CJD35_RS07815 10908f3c3782259f72bf803346791db1 498 Gene3D G3DSA:3.40.190.10 165 283 8.8E-4 T 28-03-2018 CJD35_RS07815 10908f3c3782259f72bf803346791db1 498 SUPERFAMILY SSF53850 63 490 1.09E-38 T 28-03-2018 CJD35_RS07815 10908f3c3782259f72bf803346791db1 498 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 302 2.7E-14 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CJD35_RS18310 be349039143a800d2c6fc1c290f564bc 357 Gene3D G3DSA:2.40.180.10 10 355 1.9E-69 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS18310 be349039143a800d2c6fc1c290f564bc 357 SUPERFAMILY SSF56634 42 154 3.53E-48 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS18310 be349039143a800d2c6fc1c290f564bc 357 SUPERFAMILY SSF56634 184 350 3.53E-48 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS21430 be349039143a800d2c6fc1c290f564bc 357 Gene3D G3DSA:2.40.180.10 10 355 1.9E-69 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS21430 be349039143a800d2c6fc1c290f564bc 357 SUPERFAMILY SSF56634 42 154 3.53E-48 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS21430 be349039143a800d2c6fc1c290f564bc 357 SUPERFAMILY SSF56634 184 350 3.53E-48 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS14070 094d1be7eb1c802d786a452ab1d4f5d7 671 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 406 2.2E-11 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS14070 094d1be7eb1c802d786a452ab1d4f5d7 671 SMART SM00267 238 408 1.4E-13 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS14070 094d1be7eb1c802d786a452ab1d4f5d7 671 Gene3D G3DSA:3.20.20.450 417 670 8.9E-81 T 28-03-2018 IPR001633 EAL domain CJD35_RS14070 094d1be7eb1c802d786a452ab1d4f5d7 671 Pfam PF00563 EAL domain 425 654 3.7E-62 T 28-03-2018 IPR001633 EAL domain CJD35_RS14070 094d1be7eb1c802d786a452ab1d4f5d7 671 SMART SM00052 418 663 1.7E-81 T 28-03-2018 IPR001633 EAL domain CJD35_RS14070 094d1be7eb1c802d786a452ab1d4f5d7 671 Gene3D G3DSA:3.40.50.2300 17 130 9.5E-6 T 28-03-2018 CJD35_RS14070 094d1be7eb1c802d786a452ab1d4f5d7 671 Pfam PF00990 Diguanylate cyclase, GGDEF domain 250 402 1.2E-19 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS14070 094d1be7eb1c802d786a452ab1d4f5d7 671 SUPERFAMILY SSF55073 255 408 1.26E-22 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS14070 094d1be7eb1c802d786a452ab1d4f5d7 671 SUPERFAMILY SSF52172 18 131 1.87E-7 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS14070 094d1be7eb1c802d786a452ab1d4f5d7 671 Gene3D G3DSA:3.30.70.270 248 416 2.2E-31 T 28-03-2018 CJD35_RS14070 094d1be7eb1c802d786a452ab1d4f5d7 671 SUPERFAMILY SSF141868 423 667 3.4E-74 T 28-03-2018 IPR001633 EAL domain CJD35_RS00285 6b22d66adaff0c5d23eea6e25420228a 177 SUPERFAMILY SSF49329 33 174 1.44E-39 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CJD35_RS00285 6b22d66adaff0c5d23eea6e25420228a 177 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 40 173 3.6E-36 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CJD35_RS00285 6b22d66adaff0c5d23eea6e25420228a 177 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 149 175 7.3E-5 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CJD35_RS00285 6b22d66adaff0c5d23eea6e25420228a 177 PRINTS PR00068 Cu-Zn-superoxide dismutase family signature 107 116 7.3E-5 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CJD35_RS00285 6b22d66adaff0c5d23eea6e25420228a 177 Gene3D G3DSA:2.60.40.200 26 175 1.0E-37 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CJD35_RS07825 d36f4fade32bfbd4bf758d9577293cf2 234 Gene3D G3DSA:3.40.50.2300 1 124 4.2E-33 T 28-03-2018 CJD35_RS07825 d36f4fade32bfbd4bf758d9577293cf2 234 SMART SM00862 155 231 2.5E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS07825 d36f4fade32bfbd4bf758d9577293cf2 234 Pfam PF00072 Response regulator receiver domain 5 114 3.0E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS07825 d36f4fade32bfbd4bf758d9577293cf2 234 SMART SM00448 3 113 7.5E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS07825 d36f4fade32bfbd4bf758d9577293cf2 234 Gene3D G3DSA:1.10.10.10 125 234 6.6E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07825 d36f4fade32bfbd4bf758d9577293cf2 234 SUPERFAMILY SSF46894 137 232 2.41E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS07825 d36f4fade32bfbd4bf758d9577293cf2 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 2.8E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS07825 d36f4fade32bfbd4bf758d9577293cf2 234 SUPERFAMILY SSF52172 3 126 9.82E-37 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS14680 5b0ff4c58b22c8b42ee187b6413ce46c 501 SUPERFAMILY SSF55931 16 311 4.25E-113 T 28-03-2018 CJD35_RS14680 5b0ff4c58b22c8b42ee187b6413ce46c 501 SMART SM00845 343 499 1.2E-72 T 28-03-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CJD35_RS14680 5b0ff4c58b22c8b42ee187b6413ce46c 501 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 14 499 2.0E-160 T 28-03-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CJD35_RS14680 5b0ff4c58b22c8b42ee187b6413ce46c 501 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 160 174 - T 28-03-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 CJD35_RS14680 5b0ff4c58b22c8b42ee187b6413ce46c 501 Pfam PF02637 GatB domain 362 499 7.7E-49 T 28-03-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 CJD35_RS14680 5b0ff4c58b22c8b42ee187b6413ce46c 501 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 14 500 36.409 T 28-03-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 CJD35_RS14680 5b0ff4c58b22c8b42ee187b6413ce46c 501 Pfam PF02934 GatB/GatE catalytic domain 17 303 5.1E-111 T 28-03-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 CJD35_RS14680 5b0ff4c58b22c8b42ee187b6413ce46c 501 SUPERFAMILY SSF89095 312 427 2.35E-27 T 28-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 CJD35_RS14680 5b0ff4c58b22c8b42ee187b6413ce46c 501 Gene3D G3DSA:1.10.10.410 439 500 1.0E-22 T 28-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CJD35_RS03270 998c5e0bf31ffa65fab9c73e51d1ec6a 350 Gene3D G3DSA:3.30.1330.60 127 315 6.1E-29 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS03270 998c5e0bf31ffa65fab9c73e51d1ec6a 350 SUPERFAMILY SSF103088 179 283 1.44E-18 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS03270 998c5e0bf31ffa65fab9c73e51d1ec6a 350 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 24 72 1.2E-18 T 28-03-2018 IPR025713 Motility protein B, N-terminal domain CJD35_RS03270 998c5e0bf31ffa65fab9c73e51d1ec6a 350 Pfam PF00691 OmpA family 180 273 4.3E-12 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS03945 6f3bf6dddce68433015a9c251c470bef 389 Gene3D G3DSA:2.40.50.100 191 359 5.1E-6 T 28-03-2018 CJD35_RS03945 6f3bf6dddce68433015a9c251c470bef 389 Gene3D G3DSA:2.40.50.100 88 146 5.3E-14 T 28-03-2018 CJD35_RS03945 6f3bf6dddce68433015a9c251c470bef 389 SUPERFAMILY SSF111369 98 310 1.19E-20 T 28-03-2018 CJD35_RS03945 6f3bf6dddce68433015a9c251c470bef 389 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 64 383 3.9E-62 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CJD35_RS03945 6f3bf6dddce68433015a9c251c470bef 389 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 98 302 2.4E-20 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJD35_RS03945 6f3bf6dddce68433015a9c251c470bef 389 Gene3D G3DSA:1.10.287.470 147 190 3.3E-9 T 28-03-2018 CJD35_RS00935 073d370152b66e38dff40efe0f233c7c 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 7.6E-11 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS00935 073d370152b66e38dff40efe0f233c7c 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 7.6E-11 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS00935 073d370152b66e38dff40efe0f233c7c 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 7.6E-11 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS00935 073d370152b66e38dff40efe0f233c7c 274 Gene3D G3DSA:3.40.50.1820 1 273 1.7E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS00935 073d370152b66e38dff40efe0f233c7c 274 PRINTS PR00412 Epoxide hydrolase signature 248 270 7.9E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS00935 073d370152b66e38dff40efe0f233c7c 274 PRINTS PR00412 Epoxide hydrolase signature 27 45 7.9E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS00935 073d370152b66e38dff40efe0f233c7c 274 PRINTS PR00412 Epoxide hydrolase signature 214 230 7.9E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS00935 073d370152b66e38dff40efe0f233c7c 274 PRINTS PR00412 Epoxide hydrolase signature 47 62 7.9E-6 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CJD35_RS00935 073d370152b66e38dff40efe0f233c7c 274 SUPERFAMILY SSF53474 3 272 1.62E-62 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS00935 073d370152b66e38dff40efe0f233c7c 274 Pfam PF00561 alpha/beta hydrolase fold 21 255 1.5E-26 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS03885 908fb3c713f305229444d9a4e1d8e0cc 84 Gene3D G3DSA:2.30.30.90 1 83 4.0E-13 T 28-03-2018 CJD35_RS03885 908fb3c713f305229444d9a4e1d8e0cc 84 SUPERFAMILY SSF50037 3 77 5.19E-9 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal CJD35_RS03885 908fb3c713f305229444d9a4e1d8e0cc 84 SMART SM00899 1 78 1.3E-10 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CJD35_RS03885 908fb3c713f305229444d9a4e1d8e0cc 84 Pfam PF04023 FeoA domain 1 77 1.3E-11 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CJD35_RS03635 e726d90ae7a0adb3cfca284b490c72a4 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.1E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS03635 e726d90ae7a0adb3cfca284b490c72a4 292 Gene3D G3DSA:3.40.190.10 177 262 1.6E-12 T 28-03-2018 CJD35_RS03635 e726d90ae7a0adb3cfca284b490c72a4 292 SUPERFAMILY SSF46785 6 112 1.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03635 e726d90ae7a0adb3cfca284b490c72a4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS03635 e726d90ae7a0adb3cfca284b490c72a4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS03635 e726d90ae7a0adb3cfca284b490c72a4 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.2E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS03635 e726d90ae7a0adb3cfca284b490c72a4 292 Gene3D G3DSA:1.10.10.10 4 87 1.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03635 e726d90ae7a0adb3cfca284b490c72a4 292 SUPERFAMILY SSF53850 94 290 3.8E-33 T 28-03-2018 CJD35_RS03635 e726d90ae7a0adb3cfca284b490c72a4 292 Pfam PF03466 LysR substrate binding domain 89 289 2.4E-31 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS03635 e726d90ae7a0adb3cfca284b490c72a4 292 Gene3D G3DSA:3.40.190.10 94 176 7.2E-8 T 28-03-2018 CJD35_RS02520 ef72b0de776111efbef26e4e49393196 125 Pfam PF03203 MerC mercury resistance protein 15 122 2.2E-21 T 28-03-2018 IPR004891 MerC mercury resistance protein CJD35_RS16725 2f5f4eabae4a08de628d203508b0bc37 837 Pfam PF02687 FtsX-like permease family 290 378 3.7E-7 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CJD35_RS16725 2f5f4eabae4a08de628d203508b0bc37 837 Pfam PF12704 MacB-like periplasmic core domain 29 230 3.3E-9 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CJD35_RS05875 d44f1b7b827c7b37d543681166721105 307 Pfam PF02195 ParB-like nuclease domain 49 137 3.0E-26 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS05875 d44f1b7b827c7b37d543681166721105 307 Gene3D G3DSA:3.90.1530.10 37 137 1.7E-36 T 28-03-2018 CJD35_RS05875 d44f1b7b827c7b37d543681166721105 307 SUPERFAMILY SSF109709 129 237 3.4E-33 T 28-03-2018 CJD35_RS05875 d44f1b7b827c7b37d543681166721105 307 SMART SM00470 48 137 6.9E-35 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS05875 d44f1b7b827c7b37d543681166721105 307 SUPERFAMILY SSF110849 48 139 1.18E-29 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS05875 d44f1b7b827c7b37d543681166721105 307 Gene3D G3DSA:1.10.10.730 138 185 4.6E-20 T 28-03-2018 CJD35_RS05875 d44f1b7b827c7b37d543681166721105 307 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 47 214 7.7E-60 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CJD35_RS17890 05740184f7b9bbd20c4bf8a66be5462a 499 Pfam PF08666 SAF domain 15 86 1.2E-11 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CJD35_RS17890 05740184f7b9bbd20c4bf8a66be5462a 499 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 115 498 1.9E-142 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CJD35_RS17890 05740184f7b9bbd20c4bf8a66be5462a 499 SMART SM00858 15 86 2.1E-10 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CJD35_RS09065 c5b522ddd879d55b0ad37dc9296963a0 508 Pfam PF05159 Capsule polysaccharide biosynthesis protein 199 456 7.3E-37 T 28-03-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CJD35_RS06175 5527b6b3bd13103d9b8dd40bc8869365 506 Gene3D G3DSA:3.40.605.10 6 274 3.1E-94 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS06175 5527b6b3bd13103d9b8dd40bc8869365 506 SUPERFAMILY SSF53720 14 498 3.01E-163 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS06175 5527b6b3bd13103d9b8dd40bc8869365 506 Pfam PF00171 Aldehyde dehydrogenase family 27 493 3.3E-166 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS06175 5527b6b3bd13103d9b8dd40bc8869365 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 294 305 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS06175 5527b6b3bd13103d9b8dd40bc8869365 506 Gene3D G3DSA:3.40.309.10 275 480 2.6E-65 T 28-03-2018 CJD35_RS06175 5527b6b3bd13103d9b8dd40bc8869365 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 261 268 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS00610 808055e9b49bde593bf2db5973c8af37 156 SUPERFAMILY SSF50475 6 126 6.34E-19 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CJD35_RS00610 808055e9b49bde593bf2db5973c8af37 156 Gene3D G3DSA:2.30.110.10 2 141 6.7E-10 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CJD35_RS00610 808055e9b49bde593bf2db5973c8af37 156 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 137 6.0E-22 T 28-03-2018 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 21 323 38.747 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 PRINTS PR00101 Aspartate carbamoyltransferase signature 59 81 2.1E-26 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 PRINTS PR00101 Aspartate carbamoyltransferase signature 152 169 2.1E-26 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 PRINTS PR00101 Aspartate carbamoyltransferase signature 236 245 2.1E-26 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 PRINTS PR00101 Aspartate carbamoyltransferase signature 97 106 2.1E-26 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 PRINTS PR00101 Aspartate carbamoyltransferase signature 302 316 2.1E-26 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 PRINTS PR00101 Aspartate carbamoyltransferase signature 277 282 2.1E-26 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 173 318 2.6E-22 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 Gene3D G3DSA:3.40.50.1370 180 323 2.1E-45 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 Gene3D G3DSA:3.40.50.1370 14 179 3.9E-62 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 22 320 4.5E-91 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 SUPERFAMILY SSF53671 19 321 8.51E-95 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 69 88 6.5E-13 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 273 282 6.5E-13 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 153 164 6.5E-13 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 69 76 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS10725 b27a0ce00e2054c93dad5aed142d7730 340 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 22 165 6.1E-40 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CJD35_RS04725 34017a800d2deb771c564291623e4a12 322 PRINTS PR01217 Proline rich extensin signature 98 114 9.8E-10 T 28-03-2018 CJD35_RS04725 34017a800d2deb771c564291623e4a12 322 PRINTS PR01217 Proline rich extensin signature 117 134 9.8E-10 T 28-03-2018 CJD35_RS04725 34017a800d2deb771c564291623e4a12 322 PRINTS PR01217 Proline rich extensin signature 76 97 9.8E-10 T 28-03-2018 CJD35_RS04725 34017a800d2deb771c564291623e4a12 322 PRINTS PR01217 Proline rich extensin signature 53 65 9.8E-10 T 28-03-2018 CJD35_RS04725 34017a800d2deb771c564291623e4a12 322 Gene3D G3DSA:3.30.1150.10 209 317 1.8E-15 T 28-03-2018 CJD35_RS13050 8910df020274fb207c28014518bfe439 341 Gene3D G3DSA:3.40.50.720 1 142 5.5E-37 T 28-03-2018 CJD35_RS13050 8910df020274fb207c28014518bfe439 341 PIRSF PIRSF000148 2 338 7.8E-131 T 28-03-2018 CJD35_RS13050 8910df020274fb207c28014518bfe439 341 Gene3D G3DSA:3.30.360.10 143 317 6.2E-75 T 28-03-2018 CJD35_RS13050 8910df020274fb207c28014518bfe439 341 SUPERFAMILY SSF51735 3 159 7.62E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS13050 8910df020274fb207c28014518bfe439 341 SUPERFAMILY SSF55347 131 321 4.46E-76 T 28-03-2018 CJD35_RS13050 8910df020274fb207c28014518bfe439 341 SMART SM00859 4 121 1.4E-43 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CJD35_RS13050 8910df020274fb207c28014518bfe439 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 333 5.2E-139 T 28-03-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CJD35_RS13050 8910df020274fb207c28014518bfe439 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 320 2.0E-56 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CJD35_RS13050 8910df020274fb207c28014518bfe439 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 119 9.2E-33 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CJD35_RS13050 8910df020274fb207c28014518bfe439 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 2 334 36.461 T 28-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CJD35_RS13940 3ac87b7425959472daa0f183f79194c1 424 SUPERFAMILY SSF56601 323 408 4.12E-22 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS13940 3ac87b7425959472daa0f183f79194c1 424 SUPERFAMILY SSF56601 134 267 4.12E-22 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS13940 3ac87b7425959472daa0f183f79194c1 424 Gene3D G3DSA:3.40.710.10 57 419 4.6E-19 T 28-03-2018 CJD35_RS13940 3ac87b7425959472daa0f183f79194c1 424 Pfam PF13354 Beta-lactamase enzyme family 162 341 3.6E-13 T 28-03-2018 CJD35_RS16655 fabbfd2b17a2e03180e9fab0f6c21751 433 Gene3D G3DSA:1.20.1250.20 4 200 5.9E-38 T 28-03-2018 CJD35_RS16655 fabbfd2b17a2e03180e9fab0f6c21751 433 Pfam PF07690 Major Facilitator Superfamily 21 362 2.5E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS16655 fabbfd2b17a2e03180e9fab0f6c21751 433 SUPERFAMILY SSF103473 404 427 1.7E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS16655 fabbfd2b17a2e03180e9fab0f6c21751 433 SUPERFAMILY SSF103473 5 371 1.7E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS16655 fabbfd2b17a2e03180e9fab0f6c21751 433 Gene3D G3DSA:1.20.1250.20 201 432 1.1E-9 T 28-03-2018 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 Gene3D G3DSA:3.40.50.620 214 394 6.1E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 SUPERFAMILY SSF52317 7 231 4.59E-53 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 Gene3D G3DSA:3.30.300.10 395 519 6.5E-54 T 28-03-2018 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 SUPERFAMILY SSF52402 191 413 2.43E-59 T 28-03-2018 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 Pfam PF02540 NAD synthase 217 254 1.0E-5 T 28-03-2018 IPR022310 NAD/GMP synthase CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 SUPERFAMILY SSF54810 399 519 8.24E-51 T 28-03-2018 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 Pfam PF00958 GMP synthase C terminal domain 427 518 4.4E-43 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 209 519 3.4E-144 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 Gene3D G3DSA:3.40.50.880 5 213 1.2E-49 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 PRINTS PR00097 Anthranilate synthase component II signature 53 62 7.2E-6 T 28-03-2018 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 PRINTS PR00097 Anthranilate synthase component II signature 80 91 7.2E-6 T 28-03-2018 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 PRINTS PR00097 Anthranilate synthase component II signature 171 184 7.2E-6 T 28-03-2018 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 197 2.5E-69 T 28-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 519 53.641 T 28-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 Pfam PF00117 Glutamine amidotransferase class-I 11 193 3.4E-38 T 28-03-2018 IPR017926 Glutamine amidotransferase CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 1.7E-7 T 28-03-2018 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 1.7E-7 T 28-03-2018 CJD35_RS06815 10c0f68f0889cd13e04200dfe5df6a6c 519 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 1.7E-7 T 28-03-2018 CJD35_RS13070 a4bf0bca50c2c39907aa2f2d2ce50008 383 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 216 377 3.1E-42 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS13070 a4bf0bca50c2c39907aa2f2d2ce50008 383 Gene3D G3DSA:3.30.70.270 209 382 4.8E-52 T 28-03-2018 CJD35_RS13070 a4bf0bca50c2c39907aa2f2d2ce50008 383 SMART SM00267 208 379 1.1E-49 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS13070 a4bf0bca50c2c39907aa2f2d2ce50008 383 SUPERFAMILY SSF55073 224 379 4.32E-43 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS13070 a4bf0bca50c2c39907aa2f2d2ce50008 383 Pfam PF00990 Diguanylate cyclase, GGDEF domain 220 375 1.2E-39 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS08855 1fc4a615f9130957f4f21d86a34c92b1 513 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 8 440 3.0E-163 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CJD35_RS08855 1fc4a615f9130957f4f21d86a34c92b1 513 Gene3D G3DSA:1.10.510.10 246 358 6.6E-5 T 28-03-2018 CJD35_RS08855 1fc4a615f9130957f4f21d86a34c92b1 513 Gene3D G3DSA:3.30.200.20 100 242 3.2E-23 T 28-03-2018 CJD35_RS08855 1fc4a615f9130957f4f21d86a34c92b1 513 Pfam PF03109 ABC1 family 111 228 2.2E-31 T 28-03-2018 IPR004147 UbiB domain CJD35_RS08855 1fc4a615f9130957f4f21d86a34c92b1 513 SUPERFAMILY SSF56112 195 429 3.68E-37 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS08855 1fc4a615f9130957f4f21d86a34c92b1 513 SUPERFAMILY SSF56112 93 156 3.68E-37 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS09625 f6cf2a5fdd4b093331e1360112c9b17c 551 Gene3D G3DSA:3.40.50.300 86 484 4.7E-32 T 28-03-2018 CJD35_RS09625 f6cf2a5fdd4b093331e1360112c9b17c 551 SUPERFAMILY SSF52540 148 516 5.32E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09625 f6cf2a5fdd4b093331e1360112c9b17c 551 Pfam PF01935 Domain of unknown function DUF87 147 381 6.2E-49 T 28-03-2018 IPR002789 Helicase HerA, central domain CJD35_RS09625 f6cf2a5fdd4b093331e1360112c9b17c 551 Pfam PF05872 Bacterial protein of unknown function (DUF853) 392 475 2.0E-4 T 28-03-2018 IPR033186 Helicase HerA-like C-terminal CJD35_RS20940 16f2e13e4ccad448059d9f5abf72f90e 965 Pfam PF01526 Tn3 transposase DDE domain 571 957 1.2E-129 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS20940 16f2e13e4ccad448059d9f5abf72f90e 965 Pfam PF13700 Domain of unknown function (DUF4158) 6 171 5.9E-44 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CJD35_RS15135 16f2e13e4ccad448059d9f5abf72f90e 965 Pfam PF01526 Tn3 transposase DDE domain 571 957 1.2E-129 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS15135 16f2e13e4ccad448059d9f5abf72f90e 965 Pfam PF13700 Domain of unknown function (DUF4158) 6 171 5.9E-44 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 6.1E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 6.1E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 254 1.8E-56 T 28-03-2018 CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 2.4E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 2.4E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.4E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.4E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 136 152 2.4E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.4E-29 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 Gene3D G3DSA:3.40.50.720 2 48 5.7E-9 T 28-03-2018 CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 Gene3D G3DSA:3.40.50.720 49 265 3.1E-53 T 28-03-2018 CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 SUPERFAMILY SSF51735 7 256 1.33E-70 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15795 6ebc6cf501943466c0bbed219e843aab 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS13985 227087e23dcd9a6ebd3f2067cad5cc2e 251 SMART SM00100 36 154 2.0E-16 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CJD35_RS13985 227087e23dcd9a6ebd3f2067cad5cc2e 251 Pfam PF00027 Cyclic nucleotide-binding domain 55 138 4.4E-12 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CJD35_RS13985 227087e23dcd9a6ebd3f2067cad5cc2e 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 213 228 2.6E-9 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS13985 227087e23dcd9a6ebd3f2067cad5cc2e 251 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 197 213 2.6E-9 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS13985 227087e23dcd9a6ebd3f2067cad5cc2e 251 SMART SM00419 191 240 9.4E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS13985 227087e23dcd9a6ebd3f2067cad5cc2e 251 Gene3D G3DSA:1.10.10.10 167 247 4.7E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS13985 227087e23dcd9a6ebd3f2067cad5cc2e 251 SUPERFAMILY SSF46785 168 248 8.56E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS13985 227087e23dcd9a6ebd3f2067cad5cc2e 251 Pfam PF13545 Crp-like helix-turn-helix domain 171 245 3.4E-19 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS13985 227087e23dcd9a6ebd3f2067cad5cc2e 251 SUPERFAMILY SSF51206 30 166 3.4E-27 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CJD35_RS13985 227087e23dcd9a6ebd3f2067cad5cc2e 251 Gene3D G3DSA:2.60.120.10 31 166 4.7E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS12095 da674e2dfbcc9d4057df4ec90416653e 258 Pfam PF07277 SapC 19 238 3.7E-66 T 28-03-2018 IPR010836 SapC CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 Gene3D G3DSA:1.10.560.10 1 186 1.3E-45 T 28-03-2018 IPR027413 GroEL-like equatorial domain CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 SUPERFAMILY SSF48592 406 522 2.5E-78 T 28-03-2018 CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 SUPERFAMILY SSF48592 7 134 2.5E-78 T 28-03-2018 CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 SUPERFAMILY SSF54849 138 205 1.08E-23 T 28-03-2018 CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 Gene3D G3DSA:3.50.7.10 187 373 2.0E-99 T 28-03-2018 IPR027409 GroEL-like apical domain CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 28-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 SUPERFAMILY SSF52029 185 376 3.31E-85 T 28-03-2018 IPR027409 GroEL-like apical domain CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 6.5E-98 T 28-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 Gene3D G3DSA:1.10.560.10 374 517 1.2E-27 T 28-03-2018 IPR027413 GroEL-like equatorial domain CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 1.5E-260 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS18770 140a5d90f07ac20c7ca1f3341f027f38 539 Hamap MF_00600 60 kDa chaperonin [groL]. 2 537 41.837 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 240 253 - T 28-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 4.2E-41 T 28-03-2018 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 PRINTS PR01798 Succinyl-CoA synthase signature 244 261 4.2E-41 T 28-03-2018 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 4.2E-41 T 28-03-2018 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 4.2E-41 T 28-03-2018 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 28-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 Gene3D G3DSA:3.40.50.720 1 119 5.7E-45 T 28-03-2018 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 Pfam PF00549 CoA-ligase 151 274 3.5E-19 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 SUPERFAMILY SSF52210 123 292 3.53E-50 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 SUPERFAMILY SSF51735 1 122 3.11E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 SMART SM00881 4 100 6.1E-32 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 292 42.4 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 292 1.4E-135 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 Gene3D G3DSA:3.40.50.261 120 294 9.0E-51 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 PIRSF PIRSF001553 1 294 4.7E-127 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CJD35_RS01605 be2cffc58cf432da106cf2bbc6e79817 294 Pfam PF02629 CoA binding domain 6 99 4.5E-29 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CJD35_RS13020 b04d59eba600c566933c64e099d450fa 433 SMART SM00382 50 322 8.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS13020 b04d59eba600c566933c64e099d450fa 433 Gene3D G3DSA:1.10.8.60 325 421 1.1E-26 T 28-03-2018 CJD35_RS13020 b04d59eba600c566933c64e099d450fa 433 Gene3D G3DSA:3.40.50.300 2 322 2.0E-48 T 28-03-2018 CJD35_RS13020 b04d59eba600c566933c64e099d450fa 433 Pfam PF07724 AAA domain (Cdc48 subfamily) 192 319 2.6E-37 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS13020 b04d59eba600c566933c64e099d450fa 433 SMART SM01086 325 419 1.4E-17 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CJD35_RS13020 b04d59eba600c566933c64e099d450fa 433 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 105 5.4E-6 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS13020 b04d59eba600c566933c64e099d450fa 433 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 433 1.0E-172 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CJD35_RS13020 b04d59eba600c566933c64e099d450fa 433 SUPERFAMILY SSF52540 3 429 2.16E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08385 aa6687ed8bb6d34338301ab701945387 102 Gene3D G3DSA:3.40.190.10 1 82 3.0E-4 T 28-03-2018 CJD35_RS16410 6958f79ad69c654dffc0a94c1d29b311 404 SUPERFAMILY SSF103473 21 402 1.26E-51 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS16410 6958f79ad69c654dffc0a94c1d29b311 404 Pfam PF07690 Major Facilitator Superfamily 26 364 2.4E-41 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS16410 6958f79ad69c654dffc0a94c1d29b311 404 Gene3D G3DSA:1.20.1250.20 12 208 4.4E-31 T 28-03-2018 CJD35_RS16410 6958f79ad69c654dffc0a94c1d29b311 404 Gene3D G3DSA:1.20.1250.20 209 404 1.7E-7 T 28-03-2018 CJD35_RS16410 6958f79ad69c654dffc0a94c1d29b311 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 23 392 4.8E-74 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CJD35_RS08300 4aa166389a7bfabd3167ddbaf739f703 148 Pfam PF06170 Protein of unknown function (DUF983) 48 132 5.1E-27 T 28-03-2018 IPR009325 Protein of unknown function DUF983 CJD35_RS08300 4aa166389a7bfabd3167ddbaf739f703 148 Gene3D G3DSA:3.20.20.70 12 142 8.3E-4 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS11080 47148d9a5d0c87fa9e5b26f65bb3ae62 199 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 7.3E-20 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11080 47148d9a5d0c87fa9e5b26f65bb3ae62 199 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 1.4E-20 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal CJD35_RS11080 47148d9a5d0c87fa9e5b26f65bb3ae62 199 SUPERFAMILY SSF55658 1 56 5.23E-17 T 28-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CJD35_RS11080 47148d9a5d0c87fa9e5b26f65bb3ae62 199 SUPERFAMILY SSF55653 57 147 2.49E-21 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal CJD35_RS11080 47148d9a5d0c87fa9e5b26f65bb3ae62 199 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.466 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS11080 47148d9a5d0c87fa9e5b26f65bb3ae62 199 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 1.4E-35 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS11080 47148d9a5d0c87fa9e5b26f65bb3ae62 199 Gene3D G3DSA:3.10.430.100 63 147 1.2E-20 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal CJD35_RS11080 47148d9a5d0c87fa9e5b26f65bb3ae62 199 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS11080 47148d9a5d0c87fa9e5b26f65bb3ae62 199 Gene3D G3DSA:3.40.5.10 1 49 1.1E-20 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS17205 acf0ab46fe736da6ea6df4ed1be4d332 331 Gene3D G3DSA:3.90.1200.10 129 316 1.1E-18 T 28-03-2018 CJD35_RS17205 acf0ab46fe736da6ea6df4ed1be4d332 331 SUPERFAMILY SSF56112 11 306 8.8E-44 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS17205 acf0ab46fe736da6ea6df4ed1be4d332 331 Gene3D G3DSA:3.30.200.20 7 116 6.3E-11 T 28-03-2018 CJD35_RS17205 acf0ab46fe736da6ea6df4ed1be4d332 331 Pfam PF01636 Phosphotransferase enzyme family 29 274 1.4E-23 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CJD35_RS16405 26ecff57253ff8349d5038774c2ccb04 441 SUPERFAMILY SSF103473 12 437 1.7E-72 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS16405 26ecff57253ff8349d5038774c2ccb04 441 Gene3D G3DSA:1.20.1250.20 238 437 5.2E-26 T 28-03-2018 CJD35_RS16405 26ecff57253ff8349d5038774c2ccb04 441 Gene3D G3DSA:1.20.1250.20 8 219 1.4E-33 T 28-03-2018 CJD35_RS16405 26ecff57253ff8349d5038774c2ccb04 441 Pfam PF07690 Major Facilitator Superfamily 34 341 1.4E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS20175 8b59ab3667ab150676c75f8a528c37fd 261 Pfam PF13545 Crp-like helix-turn-helix domain 185 253 8.7E-17 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS20175 8b59ab3667ab150676c75f8a528c37fd 261 SMART SM00100 47 165 7.2E-11 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CJD35_RS20175 8b59ab3667ab150676c75f8a528c37fd 261 SUPERFAMILY SSF46785 183 256 1.05E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS20175 8b59ab3667ab150676c75f8a528c37fd 261 Gene3D G3DSA:1.10.10.10 182 260 7.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS20175 8b59ab3667ab150676c75f8a528c37fd 261 SMART SM00419 199 247 1.1E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS20175 8b59ab3667ab150676c75f8a528c37fd 261 SUPERFAMILY SSF51206 41 180 2.88E-27 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CJD35_RS20175 8b59ab3667ab150676c75f8a528c37fd 261 Gene3D G3DSA:2.60.120.10 36 181 1.8E-24 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS20175 8b59ab3667ab150676c75f8a528c37fd 261 Pfam PF00027 Cyclic nucleotide-binding domain 66 146 2.5E-16 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CJD35_RS12030 5c70197ee917183ff2a38642ac858cc1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS12030 5c70197ee917183ff2a38642ac858cc1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS12030 5c70197ee917183ff2a38642ac858cc1 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.2E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS12030 5c70197ee917183ff2a38642ac858cc1 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 70 1.2E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS12030 5c70197ee917183ff2a38642ac858cc1 299 Gene3D G3DSA:1.10.10.10 9 91 1.4E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12030 5c70197ee917183ff2a38642ac858cc1 299 SUPERFAMILY SSF46785 4 117 2.63E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12030 5c70197ee917183ff2a38642ac858cc1 299 Pfam PF03466 LysR substrate binding domain 96 296 1.4E-37 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS12030 5c70197ee917183ff2a38642ac858cc1 299 Gene3D G3DSA:3.40.190.10 181 267 1.3E-25 T 28-03-2018 CJD35_RS12030 5c70197ee917183ff2a38642ac858cc1 299 SUPERFAMILY SSF53850 96 297 2.9E-38 T 28-03-2018 CJD35_RS12030 5c70197ee917183ff2a38642ac858cc1 299 Gene3D G3DSA:3.40.190.10 97 180 3.1E-14 T 28-03-2018 CJD35_RS12080 5412540c31992c2abb0b9453dc7c1ccc 449 SUPERFAMILY SSF56954 2 428 3.4E-86 T 28-03-2018 CJD35_RS12080 5412540c31992c2abb0b9453dc7c1ccc 449 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 435 1.4E-78 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CJD35_RS12080 5412540c31992c2abb0b9453dc7c1ccc 449 Pfam PF02321 Outer membrane efflux protein 237 427 1.0E-29 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS12080 5412540c31992c2abb0b9453dc7c1ccc 449 Pfam PF02321 Outer membrane efflux protein 26 216 8.4E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS12080 5412540c31992c2abb0b9453dc7c1ccc 449 Gene3D G3DSA:1.20.1600.10 18 429 1.9E-74 T 28-03-2018 CJD35_RS19095 c48cb3502de794b9436f0b19fcc15cf0 598 Gene3D G3DSA:1.10.443.10 164 471 3.6E-11 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19095 c48cb3502de794b9436f0b19fcc15cf0 598 SUPERFAMILY SSF47823 58 139 4.71E-5 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CJD35_RS19095 c48cb3502de794b9436f0b19fcc15cf0 598 Gene3D G3DSA:1.10.150.130 52 163 2.6E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS19095 c48cb3502de794b9436f0b19fcc15cf0 598 SUPERFAMILY SSF56349 275 458 5.0E-6 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS20275 c48cb3502de794b9436f0b19fcc15cf0 598 Gene3D G3DSA:1.10.443.10 164 471 3.6E-11 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20275 c48cb3502de794b9436f0b19fcc15cf0 598 SUPERFAMILY SSF47823 58 139 4.71E-5 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CJD35_RS20275 c48cb3502de794b9436f0b19fcc15cf0 598 Gene3D G3DSA:1.10.150.130 52 163 2.6E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20275 c48cb3502de794b9436f0b19fcc15cf0 598 SUPERFAMILY SSF56349 275 458 5.0E-6 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS14510 6aaca6c652f4b1e3c78ea9827f76834f 123 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 35 108 1.4E-33 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CJD35_RS14510 6aaca6c652f4b1e3c78ea9827f76834f 123 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 58 111 5.0E-18 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CJD35_RS14510 6aaca6c652f4b1e3c78ea9827f76834f 123 SUPERFAMILY SSF141734 12 117 1.57E-45 T 28-03-2018 CJD35_RS14510 6aaca6c652f4b1e3c78ea9827f76834f 123 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 9 112 29.517 T 28-03-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 Gene3D G3DSA:1.10.940.10 13 151 8.6E-11 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 SUPERFAMILY SSF48013 14 136 1.8E-19 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 301 312 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 SUPERFAMILY SSF53335 142 426 3.88E-62 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 Gene3D G3DSA:3.40.50.150 221 429 8.9E-57 T 28-03-2018 CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 Pfam PF01029 NusB family 14 114 1.8E-8 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 302 314 2.2E-25 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 241 251 2.2E-25 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 352 368 2.2E-25 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 212 226 2.2E-25 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 409 426 2.2E-25 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS03850 155177714b91ceaaa2e24953b25b53d9 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 232 424 5.5E-48 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CJD35_RS13270 a9e5cee4b0e7d895899c7d3adc203635 198 SUPERFAMILY SSF100950 7 188 8.23E-42 T 28-03-2018 CJD35_RS13270 a9e5cee4b0e7d895899c7d3adc203635 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 8 184 1.8E-29 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CJD35_RS13270 a9e5cee4b0e7d895899c7d3adc203635 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 8 184 1.8E-35 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CJD35_RS13270 a9e5cee4b0e7d895899c7d3adc203635 198 Gene3D G3DSA:3.40.50.10420 5 192 1.3E-44 T 28-03-2018 CJD35_RS13270 a9e5cee4b0e7d895899c7d3adc203635 198 PIRSF PIRSF006806 5 186 1.8E-29 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CJD35_RS02245 41b59927350c0c7f6331644da9cbf077 243 Pfam PF13545 Crp-like helix-turn-helix domain 151 226 2.1E-18 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS02245 41b59927350c0c7f6331644da9cbf077 243 Gene3D G3DSA:1.10.10.10 148 237 2.0E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02245 41b59927350c0c7f6331644da9cbf077 243 SUPERFAMILY SSF46785 148 240 1.83E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02245 41b59927350c0c7f6331644da9cbf077 243 Gene3D G3DSA:2.60.120.10 11 147 2.8E-17 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS02245 41b59927350c0c7f6331644da9cbf077 243 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 208 8.5E-6 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS02245 41b59927350c0c7f6331644da9cbf077 243 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 177 193 8.5E-6 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS02245 41b59927350c0c7f6331644da9cbf077 243 SMART SM00100 11 134 9.9E-9 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CJD35_RS02245 41b59927350c0c7f6331644da9cbf077 243 Pfam PF00027 Cyclic nucleotide-binding domain 33 119 1.4E-14 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CJD35_RS02245 41b59927350c0c7f6331644da9cbf077 243 SMART SM00419 171 219 1.1E-8 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS02245 41b59927350c0c7f6331644da9cbf077 243 SUPERFAMILY SSF51206 10 145 8.77E-24 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CJD35_RS10605 a6f4c50d8feb0686b004843a1ccd8cd5 231 Gene3D G3DSA:3.60.10.10 1 230 8.9E-31 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS10605 a6f4c50d8feb0686b004843a1ccd8cd5 231 SUPERFAMILY SSF56219 3 230 1.13E-33 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS10605 a6f4c50d8feb0686b004843a1ccd8cd5 231 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 7 222 8.0E-14 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS17670 939f2c78c5b9d54f3d9586559fd98471 277 SMART SM00530 10 82 2.6E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS17670 939f2c78c5b9d54f3d9586559fd98471 277 Gene3D G3DSA:1.10.260.40 1 93 1.6E-13 T 28-03-2018 CJD35_RS17670 939f2c78c5b9d54f3d9586559fd98471 277 Pfam PF13560 Helix-turn-helix domain 7 83 2.4E-14 T 28-03-2018 CJD35_RS17670 939f2c78c5b9d54f3d9586559fd98471 277 SUPERFAMILY SSF47413 28 81 3.44E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS12375 d97110995e764c1f620f5976616e80e4 157 Gene3D G3DSA:3.30.70.920 59 143 1.3E-25 T 28-03-2018 CJD35_RS12375 d97110995e764c1f620f5976616e80e4 157 SUPERFAMILY SSF46785 6 66 9.11E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12375 d97110995e764c1f620f5976616e80e4 157 Gene3D G3DSA:1.10.10.10 7 58 1.6E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12375 d97110995e764c1f620f5976616e80e4 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 7.5E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS12375 d97110995e764c1f620f5976616e80e4 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 7.5E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS12375 d97110995e764c1f620f5976616e80e4 157 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 7.5E-17 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CJD35_RS12375 d97110995e764c1f620f5976616e80e4 157 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CJD35_RS12375 d97110995e764c1f620f5976616e80e4 157 Pfam PF01037 Lrp/AsnC ligand binding domain 73 145 6.1E-22 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CJD35_RS12375 d97110995e764c1f620f5976616e80e4 157 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 4.1E-18 T 28-03-2018 CJD35_RS12375 d97110995e764c1f620f5976616e80e4 157 SUPERFAMILY SSF54909 66 155 4.02E-20 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS12375 d97110995e764c1f620f5976616e80e4 157 SMART SM00344 6 115 6.9E-46 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CJD35_RS15525 10399a26c1d27987b0e3e309c4937e2f 333 Gene3D G3DSA:3.90.180.10 1 333 4.0E-71 T 28-03-2018 CJD35_RS15525 10399a26c1d27987b0e3e309c4937e2f 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 126 2.6E-12 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS15525 10399a26c1d27987b0e3e309c4937e2f 333 SUPERFAMILY SSF51735 135 308 1.09E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15525 10399a26c1d27987b0e3e309c4937e2f 333 SMART SM00829 11 331 1.1E-12 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CJD35_RS15525 10399a26c1d27987b0e3e309c4937e2f 333 Pfam PF00107 Zinc-binding dehydrogenase 171 295 6.9E-23 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS15525 10399a26c1d27987b0e3e309c4937e2f 333 SUPERFAMILY SSF50129 1 165 1.13E-37 T 28-03-2018 IPR011032 GroES-like CJD35_RS03955 d04bb0044c575a5035b78fc08c298761 85 Pfam PF04226 Transglycosylase associated protein 33 81 2.5E-14 T 28-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 CJD35_RS10135 842575ee66e84240af285cd7aa7f8321 542 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 28 476 2.9E-39 T 28-03-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 CJD35_RS10135 842575ee66e84240af285cd7aa7f8321 542 PIRSF PIRSF031924 1 537 4.3E-177 T 28-03-2018 IPR026263 Alkaline phosphatase, prokaryotic GO:0004035 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CJD35_RS10135 842575ee66e84240af285cd7aa7f8321 542 Gene3D G3DSA:3.40.720.10 24 538 1.1E-41 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJD35_RS10135 842575ee66e84240af285cd7aa7f8321 542 SUPERFAMILY SSF53649 247 516 4.63E-56 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJD35_RS10135 842575ee66e84240af285cd7aa7f8321 542 SUPERFAMILY SSF53649 18 201 4.63E-56 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 Pfam PF00361 Proton-conducting membrane transporter 131 422 2.2E-90 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 119 2.2E-24 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 270 292 1.4E-13 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 429 451 1.4E-13 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 520 541 1.4E-13 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 82 102 1.4E-13 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 155 176 1.1E-64 T 28-03-2018 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 320 332 1.1E-64 T 28-03-2018 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 80 105 1.1E-64 T 28-03-2018 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 108 128 1.1E-64 T 28-03-2018 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 252 278 1.1E-64 T 28-03-2018 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 230 251 1.1E-64 T 28-03-2018 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 430 449 1.1E-64 T 28-03-2018 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 1 694 8.4E-259 T 28-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14390 e84298ae8a17a64f1b0ac1f6a7a1667b 697 Pfam PF06455 NADH dehydrogenase subunit 5 C-terminus 571 687 3.3E-10 T 28-03-2018 IPR010934 NADH dehydrogenase subunit 5, C-terminal GO:0008137|GO:0042773|GO:0055114 KEGG: 00190+1.6.5.3|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-5083|MetaCyc: PWY-6692|Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS20100 b5c9604e31c553071b3a91665e492d25 308 Pfam PF05443 ROS/MUCR transcriptional regulator protein 8 149 4.7E-38 T 28-03-2018 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 CJD35_RS10685 492a5983678f2dc5dfafeef48d42f9cc 596 Gene3D G3DSA:3.40.50.300 223 561 2.9E-36 T 28-03-2018 CJD35_RS10685 492a5983678f2dc5dfafeef48d42f9cc 596 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CJD35_RS10685 492a5983678f2dc5dfafeef48d42f9cc 596 Gene3D G3DSA:3.40.50.300 6 222 1.2E-53 T 28-03-2018 CJD35_RS10685 492a5983678f2dc5dfafeef48d42f9cc 596 Pfam PF00270 DEAD/DEAH box helicase 23 191 1.9E-41 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CJD35_RS10685 492a5983678f2dc5dfafeef48d42f9cc 596 Pfam PF03880 DbpA RNA binding domain 455 515 5.5E-16 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CJD35_RS10685 492a5983678f2dc5dfafeef48d42f9cc 596 SMART SM00487 18 221 1.3E-49 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CJD35_RS10685 492a5983678f2dc5dfafeef48d42f9cc 596 SUPERFAMILY SSF52540 75 352 1.56E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS10685 492a5983678f2dc5dfafeef48d42f9cc 596 SMART SM00490 257 338 1.6E-24 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS10685 492a5983678f2dc5dfafeef48d42f9cc 596 Pfam PF00271 Helicase conserved C-terminal domain 233 338 4.6E-24 T 28-03-2018 IPR001650 Helicase, C-terminal CJD35_RS04985 3caff9b31c8f98eb4a39dc2cefde24ee 856 Gene3D G3DSA:2.40.170.20 256 856 1.8E-67 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS04985 3caff9b31c8f98eb4a39dc2cefde24ee 856 SMART SM00965 55 105 8.5E-11 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CJD35_RS04985 3caff9b31c8f98eb4a39dc2cefde24ee 856 Pfam PF00593 TonB dependent receptor 347 853 3.7E-45 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS04985 3caff9b31c8f98eb4a39dc2cefde24ee 856 Pfam PF07660 Secretin and TonB N terminus short domain 56 104 1.6E-8 T 28-03-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 CJD35_RS04985 3caff9b31c8f98eb4a39dc2cefde24ee 856 SUPERFAMILY SSF56935 118 629 2.22E-84 T 28-03-2018 CJD35_RS04985 3caff9b31c8f98eb4a39dc2cefde24ee 856 SUPERFAMILY SSF56935 671 855 2.22E-84 T 28-03-2018 CJD35_RS04985 3caff9b31c8f98eb4a39dc2cefde24ee 856 Gene3D G3DSA:2.170.130.10 129 255 2.0E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS04985 3caff9b31c8f98eb4a39dc2cefde24ee 856 Pfam PF07715 TonB-dependent Receptor Plug Domain 132 249 6.4E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS19640 ba097aa4b8e5cfda9ede8edfbf94e9c3 330 SUPERFAMILY SSF53850 6 135 9.45E-35 T 28-03-2018 CJD35_RS19640 ba097aa4b8e5cfda9ede8edfbf94e9c3 330 SUPERFAMILY SSF53850 166 319 9.45E-35 T 28-03-2018 CJD35_RS19640 ba097aa4b8e5cfda9ede8edfbf94e9c3 330 Gene3D G3DSA:3.40.190.10 84 214 3.3E-23 T 28-03-2018 CJD35_RS19640 ba097aa4b8e5cfda9ede8edfbf94e9c3 330 Pfam PF09084 NMT1/THI5 like 86 140 1.2E-4 T 28-03-2018 IPR015168 SsuA/THI5-like CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 610 684 4.1E-10 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 254 275 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 SUPERFAMILY SSF46626 594 692 8.74E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 Pfam PF13360 PQQ-like domain 64 213 9.0E-19 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 Pfam PF13360 PQQ-like domain 473 536 1.4E-7 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 SUPERFAMILY SSF50998 29 614 7.72E-156 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 Gene3D G3DSA:1.10.760.10 591 697 3.0E-14 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 25 555 7.4E-178 T 28-03-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 SMART SM00564 495 527 0.014 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 SMART SM00564 177 215 0.15 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 SMART SM00564 78 110 0.0025 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 SMART SM00564 128 160 8.4E-7 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS16635 fd1205785cde0e9aada1e30d41a15d3a 700 Gene3D G3DSA:2.140.10.10 15 587 4.0E-103 T 28-03-2018 CJD35_RS19860 755c927f2db208ca9af81e9e71d85b8b 224 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 26 178 3.1E-11 T 28-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system CJD35_RS17980 4837b4171628fe996381268afe00c3fc 91 Pfam PF10048 Predicted integral membrane protein (DUF2282) 32 86 1.1E-25 T 28-03-2018 IPR018740 Protein of unknown function DUF2282, integral membrane CJD35_RS18775 5eb3b5aa3c995e95f2a8c9fb0c62d762 358 Gene3D G3DSA:3.90.550.10 3 348 7.7E-84 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS18775 5eb3b5aa3c995e95f2a8c9fb0c62d762 358 SUPERFAMILY SSF159283 283 343 8.24E-15 T 28-03-2018 CJD35_RS18775 5eb3b5aa3c995e95f2a8c9fb0c62d762 358 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 4 345 3.5E-119 T 28-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CJD35_RS18775 5eb3b5aa3c995e95f2a8c9fb0c62d762 358 Pfam PF00483 Nucleotidyl transferase 6 284 6.5E-57 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CJD35_RS18775 5eb3b5aa3c995e95f2a8c9fb0c62d762 358 SUPERFAMILY SSF53448 4 279 1.76E-66 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS10925 2635e7396f9101cb57a2076ddf099fdf 300 SUPERFAMILY SSF46785 1 111 1.12E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10925 2635e7396f9101cb57a2076ddf099fdf 300 Gene3D G3DSA:1.10.10.10 1 86 6.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10925 2635e7396f9101cb57a2076ddf099fdf 300 Pfam PF03466 LysR substrate binding domain 89 286 3.0E-32 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS10925 2635e7396f9101cb57a2076ddf099fdf 300 Gene3D G3DSA:3.40.190.10 89 174 1.8E-12 T 28-03-2018 CJD35_RS10925 2635e7396f9101cb57a2076ddf099fdf 300 SUPERFAMILY SSF53850 90 290 1.77E-35 T 28-03-2018 CJD35_RS10925 2635e7396f9101cb57a2076ddf099fdf 300 Gene3D G3DSA:3.40.190.10 175 258 1.4E-12 T 28-03-2018 CJD35_RS10925 2635e7396f9101cb57a2076ddf099fdf 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.1E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS16970 76312d143761fd072c53d7e960ddf00c 590 Gene3D G3DSA:3.40.630.10 48 336 1.5E-40 T 28-03-2018 CJD35_RS16970 76312d143761fd072c53d7e960ddf00c 590 SUPERFAMILY SSF53187 55 317 2.98E-49 T 28-03-2018 CJD35_RS16970 76312d143761fd072c53d7e960ddf00c 590 Pfam PF00246 Zinc carboxypeptidase 65 220 3.5E-27 T 28-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CJD35_RS16970 76312d143761fd072c53d7e960ddf00c 590 SMART SM00631 59 336 2.9E-5 T 28-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CJD35_RS02105 ec7c30f33c5c2a09854c5186d20fb655 110 Pfam PF00462 Glutaredoxin 18 82 5.7E-21 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CJD35_RS02105 ec7c30f33c5c2a09854c5186d20fb655 110 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 6 102 1.7E-45 T 28-03-2018 IPR004480 Monothiol glutaredoxin-related CJD35_RS02105 ec7c30f33c5c2a09854c5186d20fb655 110 PIRSF PIRSF005894 1 109 1.7E-47 T 28-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CJD35_RS02105 ec7c30f33c5c2a09854c5186d20fb655 110 Gene3D G3DSA:3.40.30.10 4 110 6.8E-32 T 28-03-2018 CJD35_RS02105 ec7c30f33c5c2a09854c5186d20fb655 110 SUPERFAMILY SSF52833 5 105 6.61E-35 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS07705 41679ac66e9fa611d233432cf59861bb 173 Gene3D G3DSA:3.90.550.10 1 173 2.7E-14 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS07705 41679ac66e9fa611d233432cf59861bb 173 SUPERFAMILY SSF53448 6 170 4.1E-19 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS07705 41679ac66e9fa611d233432cf59861bb 173 Pfam PF12804 MobA-like NTP transferase domain 8 145 1.9E-20 T 28-03-2018 IPR025877 MobA-like NTP transferase CJD35_RS01420 32a7ae984c4b4b9b06f826be78754b45 135 Pfam PF00293 NUDIX domain 10 115 1.5E-20 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CJD35_RS01420 32a7ae984c4b4b9b06f826be78754b45 135 SUPERFAMILY SSF55811 6 130 1.62E-35 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJD35_RS01420 32a7ae984c4b4b9b06f826be78754b45 135 Gene3D G3DSA:3.90.79.10 5 134 1.8E-30 T 28-03-2018 CJD35_RS01420 32a7ae984c4b4b9b06f826be78754b45 135 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CJD35_RS01420 32a7ae984c4b4b9b06f826be78754b45 135 PRINTS PR00502 NUDIX hydrolase family signature 50 65 1.5E-9 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CJD35_RS01420 32a7ae984c4b4b9b06f826be78754b45 135 PRINTS PR00502 NUDIX hydrolase family signature 36 50 1.5E-9 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CJD35_RS07575 d508cb77c00a321e84f408f8e423fb97 444 Pfam PF03471 Transporter associated domain 367 442 1.7E-21 T 28-03-2018 IPR005170 Transporter-associated domain CJD35_RS07575 d508cb77c00a321e84f408f8e423fb97 444 SUPERFAMILY SSF56176 361 441 9.27E-22 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJD35_RS07575 d508cb77c00a321e84f408f8e423fb97 444 Pfam PF01595 Domain of unknown function DUF21 18 216 1.7E-46 T 28-03-2018 IPR002550 Domain of unknown function DUF21 CJD35_RS07575 d508cb77c00a321e84f408f8e423fb97 444 Pfam PF00571 CBS domain 296 350 1.7E-5 T 28-03-2018 IPR000644 CBS domain CJD35_RS07575 d508cb77c00a321e84f408f8e423fb97 444 SUPERFAMILY SSF54631 219 352 3.78E-24 T 28-03-2018 CJD35_RS07575 d508cb77c00a321e84f408f8e423fb97 444 SMART SM01091 366 443 5.4E-26 T 28-03-2018 IPR005170 Transporter-associated domain CJD35_RS07575 d508cb77c00a321e84f408f8e423fb97 444 Gene3D G3DSA:3.30.465.10 362 444 5.4E-24 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJD35_RS07575 d508cb77c00a321e84f408f8e423fb97 444 Gene3D G3DSA:3.10.580.10 212 361 1.9E-22 T 28-03-2018 CJD35_RS06450 37a27fafad7e1afca9ef25c32cf457ca 291 SUPERFAMILY SSF53850 89 282 3.98E-29 T 28-03-2018 CJD35_RS06450 37a27fafad7e1afca9ef25c32cf457ca 291 Pfam PF03466 LysR substrate binding domain 88 277 2.0E-31 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS06450 37a27fafad7e1afca9ef25c32cf457ca 291 Gene3D G3DSA:3.40.190.10 180 265 4.5E-21 T 28-03-2018 CJD35_RS06450 37a27fafad7e1afca9ef25c32cf457ca 291 SUPERFAMILY SSF46785 1 82 1.78E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS06450 37a27fafad7e1afca9ef25c32cf457ca 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS06450 37a27fafad7e1afca9ef25c32cf457ca 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS06450 37a27fafad7e1afca9ef25c32cf457ca 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS06450 37a27fafad7e1afca9ef25c32cf457ca 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.4E-24 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS06450 37a27fafad7e1afca9ef25c32cf457ca 291 Gene3D G3DSA:3.40.190.10 88 179 1.1E-14 T 28-03-2018 CJD35_RS06450 37a27fafad7e1afca9ef25c32cf457ca 291 Gene3D G3DSA:1.10.10.10 1 81 6.3E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07110 0099f11a10d9f01726fb9113e3b7df14 221 Pfam PF06904 Extensin-like protein C-terminus 51 221 2.7E-57 T 28-03-2018 IPR009683 Extensin-like, C-terminal CJD35_RS11115 62810480dc28939f4c7c7c5f33b2c833 233 Gene3D G3DSA:3.40.50.300 2 230 1.3E-60 T 28-03-2018 CJD35_RS11115 62810480dc28939f4c7c7c5f33b2c833 233 Pfam PF00005 ABC transporter 26 174 1.0E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS11115 62810480dc28939f4c7c7c5f33b2c833 233 SMART SM00382 35 223 4.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS11115 62810480dc28939f4c7c7c5f33b2c833 233 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS11115 62810480dc28939f4c7c7c5f33b2c833 233 SUPERFAMILY SSF52540 6 227 4.03E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20995 395da465fb3959bb1d75cacdb41e0465 129 Pfam PF12599 Protein of unknown function (DUF3768) 30 128 8.1E-36 T 28-03-2018 IPR022243 Protein of unknown function DUF3768 CJD35_RS09120 9340ba5fa46893040e9ff2a4258884ee 147 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 28-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CJD35_RS09120 9340ba5fa46893040e9ff2a4258884ee 147 SUPERFAMILY SSF81330 13 142 4.58E-32 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CJD35_RS09120 9340ba5fa46893040e9ff2a4258884ee 147 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 147 22.303 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CJD35_RS09120 9340ba5fa46893040e9ff2a4258884ee 147 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 97 105 2.5E-10 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CJD35_RS09120 9340ba5fa46893040e9ff2a4258884ee 147 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.5E-10 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CJD35_RS09120 9340ba5fa46893040e9ff2a4258884ee 147 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 106 115 2.5E-10 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CJD35_RS09120 9340ba5fa46893040e9ff2a4258884ee 147 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 145 2.7E-39 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CJD35_RS09120 9340ba5fa46893040e9ff2a4258884ee 147 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 146 1.1E-34 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CJD35_RS08960 37094becb093eeb25728cf766a02c1b7 252 Gene3D G3DSA:3.40.190.80 137 251 7.5E-22 T 28-03-2018 CJD35_RS08960 37094becb093eeb25728cf766a02c1b7 252 Gene3D G3DSA:3.30.540.10 4 136 4.1E-26 T 28-03-2018 CJD35_RS08960 37094becb093eeb25728cf766a02c1b7 252 Pfam PF00459 Inositol monophosphatase family 35 248 1.2E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS08960 37094becb093eeb25728cf766a02c1b7 252 SUPERFAMILY SSF56655 5 248 2.75E-52 T 28-03-2018 CJD35_RS06110 fb23325f1571d486203bcee98702c93b 448 SMART SM00228 95 166 3.8E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS06110 fb23325f1571d486203bcee98702c93b 448 Pfam PF13180 PDZ domain 95 175 5.5E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS06110 fb23325f1571d486203bcee98702c93b 448 Gene3D G3DSA:3.30.750.44 26 94 8.0E-17 T 28-03-2018 CJD35_RS06110 fb23325f1571d486203bcee98702c93b 448 SMART SM00245 168 359 8.7E-73 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CJD35_RS06110 fb23325f1571d486203bcee98702c93b 448 SUPERFAMILY SSF52096 186 368 2.82E-76 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS06110 fb23325f1571d486203bcee98702c93b 448 SUPERFAMILY SSF52096 31 113 2.82E-76 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS06110 fb23325f1571d486203bcee98702c93b 448 Pfam PF03572 Peptidase family S41 193 358 9.9E-53 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CJD35_RS06110 fb23325f1571d486203bcee98702c93b 448 Gene3D G3DSA:3.90.226.10 169 428 4.6E-66 T 28-03-2018 CJD35_RS06110 fb23325f1571d486203bcee98702c93b 448 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 47 371 1.3E-104 T 28-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CJD35_RS06110 fb23325f1571d486203bcee98702c93b 448 SUPERFAMILY SSF50156 66 188 7.45E-24 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS06110 fb23325f1571d486203bcee98702c93b 448 Gene3D G3DSA:2.30.42.10 95 168 3.5E-17 T 28-03-2018 CJD35_RS10280 b2fdf252ae8dc352393814965bb58433 275 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 93 1.9E-24 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family CJD35_RS10280 b2fdf252ae8dc352393814965bb58433 275 Pfam PF01609 Transposase DDE domain 112 260 2.4E-22 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS04440 b2fdf252ae8dc352393814965bb58433 275 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 93 1.9E-24 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family CJD35_RS04440 b2fdf252ae8dc352393814965bb58433 275 Pfam PF01609 Transposase DDE domain 112 260 2.4E-22 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS08700 b2fdf252ae8dc352393814965bb58433 275 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 21 93 1.9E-24 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family CJD35_RS08700 b2fdf252ae8dc352393814965bb58433 275 Pfam PF01609 Transposase DDE domain 112 260 2.4E-22 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS12725 1468a7593f8ddf0e48a89600adeb92e1 492 Gene3D G3DSA:3.40.50.2020 249 449 6.6E-30 T 28-03-2018 CJD35_RS12725 1468a7593f8ddf0e48a89600adeb92e1 492 Pfam PF00156 Phosphoribosyl transferase domain 293 392 7.6E-8 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CJD35_RS12725 1468a7593f8ddf0e48a89600adeb92e1 492 SUPERFAMILY SSF56235 22 246 1.12E-66 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS12725 1468a7593f8ddf0e48a89600adeb92e1 492 Gene3D G3DSA:3.60.20.10 22 248 6.8E-53 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS12725 1468a7593f8ddf0e48a89600adeb92e1 492 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 22 469 8.9E-147 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CJD35_RS12725 1468a7593f8ddf0e48a89600adeb92e1 492 SUPERFAMILY SSF53271 257 476 7.24E-71 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CJD35_RS12725 1468a7593f8ddf0e48a89600adeb92e1 492 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 21 468 44.402 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CJD35_RS12725 1468a7593f8ddf0e48a89600adeb92e1 492 Pfam PF13537 Glutamine amidotransferase domain 101 219 8.1E-23 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CJD35_RS12725 1468a7593f8ddf0e48a89600adeb92e1 492 PIRSF PIRSF000485 18 483 4.6E-163 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CJD35_RS17565 fae61414caab0f7b0edfc6c7df839a51 422 Pfam PF04966 Carbohydrate-selective porin, OprB family 89 415 1.8E-45 T 28-03-2018 IPR007049 Carbohydrate-selective porin OprB GO:0005215|GO:0006810|GO:0016021 CJD35_RS17565 fae61414caab0f7b0edfc6c7df839a51 422 Gene3D G3DSA:2.40.160.10 72 232 0.0017 T 28-03-2018 CJD35_RS05515 68b9068f74bbcbaf4e2ae96f210520db 408 SUPERFAMILY SSF52540 11 201 1.43E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05515 68b9068f74bbcbaf4e2ae96f210520db 408 Gene3D G3DSA:3.40.50.300 6 279 2.0E-5 T 28-03-2018 CJD35_RS05515 68b9068f74bbcbaf4e2ae96f210520db 408 Pfam PF13173 AAA domain 18 133 1.3E-22 T 28-03-2018 CJD35_RS05515 68b9068f74bbcbaf4e2ae96f210520db 408 Pfam PF13635 Domain of unknown function (DUF4143) 196 355 3.6E-27 T 28-03-2018 IPR025420 Domain of unknown function DUF4143 CJD35_RS05515 68b9068f74bbcbaf4e2ae96f210520db 408 Gene3D G3DSA:3.40.1350.10 282 389 6.0E-4 T 28-03-2018 CJD35_RS05080 aa9c882f6d288f2d50a8d29d087cb4e7 202 SUPERFAMILY SSF46785 6 72 9.79E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05080 aa9c882f6d288f2d50a8d29d087cb4e7 202 Gene3D G3DSA:1.10.10.10 2 82 4.4E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05080 aa9c882f6d288f2d50a8d29d087cb4e7 202 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 6.9E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS05080 aa9c882f6d288f2d50a8d29d087cb4e7 202 SMART SM00345 10 68 3.5E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS19540 f9dc0657139328f90ee2e7a7e1a525f6 452 Gene3D G3DSA:1.20.1250.20 251 443 9.1E-14 T 28-03-2018 CJD35_RS19540 f9dc0657139328f90ee2e7a7e1a525f6 452 Gene3D G3DSA:1.20.1250.20 53 246 8.3E-20 T 28-03-2018 CJD35_RS19540 f9dc0657139328f90ee2e7a7e1a525f6 452 Pfam PF07690 Major Facilitator Superfamily 70 400 1.9E-30 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS19540 f9dc0657139328f90ee2e7a7e1a525f6 452 SUPERFAMILY SSF103473 59 437 5.1E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS00145 33ef45d27cda053ecd1136b58563af41 254 SUPERFAMILY SSF64167 1 249 6.41E-76 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CJD35_RS00145 33ef45d27cda053ecd1136b58563af41 254 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 240 3.3E-61 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CJD35_RS00145 33ef45d27cda053ecd1136b58563af41 254 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 254 35.141 T 28-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CJD35_RS00145 33ef45d27cda053ecd1136b58563af41 254 Pfam PF01975 Survival protein SurE 3 187 2.9E-56 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CJD35_RS00145 33ef45d27cda053ecd1136b58563af41 254 Gene3D G3DSA:3.40.1210.10 1 252 5.8E-76 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CJD35_RS15005 3e1fa38a7abc49bbde520f142cf464f3 340 SUPERFAMILY SSF110296 2 316 5.89E-55 T 28-03-2018 CJD35_RS15005 3e1fa38a7abc49bbde520f142cf464f3 340 Pfam PF02012 BNR/Asp-box repeat 204 213 0.09 T 28-03-2018 IPR002860 BNR repeat CJD35_RS15005 3e1fa38a7abc49bbde520f142cf464f3 340 Gene3D G3DSA:2.130.10.10 214 336 2.0E-15 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS15005 3e1fa38a7abc49bbde520f142cf464f3 340 Gene3D G3DSA:2.130.10.10 1 132 3.7E-25 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS15005 3e1fa38a7abc49bbde520f142cf464f3 340 Gene3D G3DSA:2.130.10.10 133 213 4.6E-18 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS15005 3e1fa38a7abc49bbde520f142cf464f3 340 Pfam PF15902 Sortilin, neurotensin receptor 3, 56 174 1.0E-8 T 28-03-2018 IPR031778 Sortilin, N-terminal CJD35_RS11120 0cd15d0e3beb913b9477b0ae1e1ddf3f 494 SUPERFAMILY SSF111369 67 336 8.63E-15 T 28-03-2018 CJD35_RS11120 0cd15d0e3beb913b9477b0ae1e1ddf3f 494 Gene3D G3DSA:1.20.1600.10 43 397 5.3E-37 T 28-03-2018 CJD35_RS11120 0cd15d0e3beb913b9477b0ae1e1ddf3f 494 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 355 9.4E-38 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CJD35_RS11120 0cd15d0e3beb913b9477b0ae1e1ddf3f 494 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 79 287 2.2E-18 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJD35_RS22000 54896b5ab897d8fb8ef54c4c26f99452 149 Pfam PF04214 Protein of unknown function, DUF 53 122 2.5E-25 T 28-03-2018 IPR007332 Protein of unknown function DUF411 CJD35_RS17985 99a7188b0a6608cc5ef6e3fc741a1dfc 179 Pfam PF04542 Sigma-70 region 2 27 94 2.7E-15 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS17985 99a7188b0a6608cc5ef6e3fc741a1dfc 179 SUPERFAMILY SSF88659 115 173 4.49E-10 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS17985 99a7188b0a6608cc5ef6e3fc741a1dfc 179 Gene3D G3DSA:1.10.10.10 118 177 6.9E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17985 99a7188b0a6608cc5ef6e3fc741a1dfc 179 Gene3D G3DSA:1.10.1740.10 14 97 1.2E-21 T 28-03-2018 CJD35_RS17985 99a7188b0a6608cc5ef6e3fc741a1dfc 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 170 4.9E-21 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS17985 99a7188b0a6608cc5ef6e3fc741a1dfc 179 SUPERFAMILY SSF88946 4 108 1.05E-22 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS17985 99a7188b0a6608cc5ef6e3fc741a1dfc 179 Pfam PF08281 Sigma-70, region 4 118 170 4.6E-10 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS11150 424cb69ebfeb877b1a757ba6c9c00c10 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 5.0E-11 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CJD35_RS11150 424cb69ebfeb877b1a757ba6c9c00c10 77 SMART SM00823 Phosphopantetheine attachment site 5 63 0.0072 T 28-03-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 CJD35_RS11150 424cb69ebfeb877b1a757ba6c9c00c10 77 SUPERFAMILY SSF47336 2 76 4.71E-24 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CJD35_RS11150 424cb69ebfeb877b1a757ba6c9c00c10 77 Gene3D G3DSA:1.10.1200.10 1 77 1.7E-26 T 28-03-2018 CJD35_RS11150 424cb69ebfeb877b1a757ba6c9c00c10 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site CJD35_RS11150 424cb69ebfeb877b1a757ba6c9c00c10 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.6E-15 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CJD35_RS11150 424cb69ebfeb877b1a757ba6c9c00c10 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 23.13 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CJD35_RS11150 424cb69ebfeb877b1a757ba6c9c00c10 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 8.4E-34 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CJD35_RS07330 92a37afd5c695a6632520b1f7c2c404a 334 Gene3D G3DSA:1.10.10.10 155 334 3.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07330 92a37afd5c695a6632520b1f7c2c404a 334 SUPERFAMILY SSF46785 250 332 7.86E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07330 92a37afd5c695a6632520b1f7c2c404a 334 Pfam PF01047 MarR family 264 308 1.1E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS17255 ca91617ac889ebda3170c8dabd83a03c 276 SMART SM00419 206 254 4.2E-7 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS17255 ca91617ac889ebda3170c8dabd83a03c 276 SUPERFAMILY SSF46785 185 263 1.68E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17255 ca91617ac889ebda3170c8dabd83a03c 276 Pfam PF13545 Crp-like helix-turn-helix domain 188 261 6.5E-15 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CJD35_RS17255 ca91617ac889ebda3170c8dabd83a03c 276 Gene3D G3DSA:1.10.10.10 189 273 1.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17255 ca91617ac889ebda3170c8dabd83a03c 276 Pfam PF00027 Cyclic nucleotide-binding domain 68 154 1.6E-15 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CJD35_RS17255 ca91617ac889ebda3170c8dabd83a03c 276 SMART SM00100 49 170 1.4E-12 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CJD35_RS17255 ca91617ac889ebda3170c8dabd83a03c 276 Gene3D G3DSA:2.60.120.10 40 188 3.7E-22 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS17255 ca91617ac889ebda3170c8dabd83a03c 276 SUPERFAMILY SSF51206 47 176 5.37E-26 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CJD35_RS10850 c533fd8aaffc119f1d31b5b681ea976a 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 251 1.7E-54 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CJD35_RS10850 c533fd8aaffc119f1d31b5b681ea976a 332 Gene3D G3DSA:3.40.50.720 1 168 2.1E-29 T 28-03-2018 CJD35_RS10850 c533fd8aaffc119f1d31b5b681ea976a 332 SUPERFAMILY SSF51735 1 327 2.31E-85 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10850 c533fd8aaffc119f1d31b5b681ea976a 332 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 7 329 3.1E-125 T 28-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 CJD35_RS10850 c533fd8aaffc119f1d31b5b681ea976a 332 Gene3D G3DSA:3.90.25.10 169 332 4.5E-30 T 28-03-2018 CJD35_RS18410 ca2332cf3d3ce95563fc026cf0a58966 279 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 7 123 4.5E-7 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CJD35_RS18410 ca2332cf3d3ce95563fc026cf0a58966 279 Gene3D G3DSA:3.40.50.620 2 253 5.9E-32 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS18410 ca2332cf3d3ce95563fc026cf0a58966 279 SUPERFAMILY SSF52402 4 175 2.43E-20 T 28-03-2018 CJD35_RS21530 ca2332cf3d3ce95563fc026cf0a58966 279 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 7 123 4.5E-7 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CJD35_RS21530 ca2332cf3d3ce95563fc026cf0a58966 279 Gene3D G3DSA:3.40.50.620 2 253 5.9E-32 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS21530 ca2332cf3d3ce95563fc026cf0a58966 279 SUPERFAMILY SSF52402 4 175 2.43E-20 T 28-03-2018 CJD35_RS17480 46b9480500ee0bc82e1864c0a825ddeb 826 Gene3D G3DSA:2.170.130.10 46 186 3.0E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17480 46b9480500ee0bc82e1864c0a825ddeb 826 Gene3D G3DSA:2.40.170.20 196 826 8.3E-46 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17480 46b9480500ee0bc82e1864c0a825ddeb 826 Pfam PF07715 TonB-dependent Receptor Plug Domain 83 178 1.0E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17480 46b9480500ee0bc82e1864c0a825ddeb 826 ProSitePatterns PS00018 EF-hand calcium-binding domain. 307 319 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site CJD35_RS17480 46b9480500ee0bc82e1864c0a825ddeb 826 SUPERFAMILY SSF56935 716 826 1.19E-76 T 28-03-2018 CJD35_RS17480 46b9480500ee0bc82e1864c0a825ddeb 826 SUPERFAMILY SSF56935 365 679 1.19E-76 T 28-03-2018 CJD35_RS17480 46b9480500ee0bc82e1864c0a825ddeb 826 SUPERFAMILY SSF56935 40 299 1.19E-76 T 28-03-2018 CJD35_RS20395 c859edc48bc3df0d18e502c19807a698 334 Gene3D G3DSA:1.10.443.10 122 304 4.5E-38 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20395 c859edc48bc3df0d18e502c19807a698 334 SUPERFAMILY SSF56349 118 303 1.68E-43 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS20395 c859edc48bc3df0d18e502c19807a698 334 Gene3D G3DSA:1.10.150.130 1 98 6.6E-14 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20395 c859edc48bc3df0d18e502c19807a698 334 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 13 94 2.4E-9 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS20395 c859edc48bc3df0d18e502c19807a698 334 Pfam PF00589 Phage integrase family 123 295 2.2E-32 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19210 c859edc48bc3df0d18e502c19807a698 334 Gene3D G3DSA:1.10.443.10 122 304 4.5E-38 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19210 c859edc48bc3df0d18e502c19807a698 334 SUPERFAMILY SSF56349 118 303 1.68E-43 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS19210 c859edc48bc3df0d18e502c19807a698 334 Gene3D G3DSA:1.10.150.130 1 98 6.6E-14 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS19210 c859edc48bc3df0d18e502c19807a698 334 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 13 94 2.4E-9 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS19210 c859edc48bc3df0d18e502c19807a698 334 Pfam PF00589 Phage integrase family 123 295 2.2E-32 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS12230 b340c9b8c61ee05bf8159ffc14ab4008 211 Hamap MF_00238 Cytidylate kinase [cmk]. 1 205 29.075 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CJD35_RS12230 b340c9b8c61ee05bf8159ffc14ab4008 211 Gene3D G3DSA:3.40.50.300 1 208 1.6E-39 T 28-03-2018 CJD35_RS12230 b340c9b8c61ee05bf8159ffc14ab4008 211 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 199 4.2E-49 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CJD35_RS12230 b340c9b8c61ee05bf8159ffc14ab4008 211 Pfam PF02224 Cytidylate kinase 3 201 1.2E-52 T 28-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CJD35_RS12230 b340c9b8c61ee05bf8159ffc14ab4008 211 SUPERFAMILY SSF52540 1 204 1.6E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08765 914cb8f780b43089b15ea1f271adeadb 413 SUPERFAMILY SSF81342 2 173 7.3E-29 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CJD35_RS08765 914cb8f780b43089b15ea1f271adeadb 413 Pfam PF01292 Prokaryotic cytochrome b561 3 171 2.5E-23 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CJD35_RS08765 914cb8f780b43089b15ea1f271adeadb 413 SMART SM00867 253 410 3.5E-33 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJD35_RS08765 914cb8f780b43089b15ea1f271adeadb 413 Gene3D G3DSA:2.40.128.110 252 413 4.6E-33 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJD35_RS08765 914cb8f780b43089b15ea1f271adeadb 413 SUPERFAMILY SSF101874 253 412 9.68E-36 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJD35_RS08765 914cb8f780b43089b15ea1f271adeadb 413 Pfam PF04264 YceI-like domain 261 408 9.8E-24 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJD35_RS08765 914cb8f780b43089b15ea1f271adeadb 413 Gene3D G3DSA:1.20.950.20 1 199 2.1E-29 T 28-03-2018 CJD35_RS04015 e21698f47ba7c5f8ea38e07f29f20321 226 Pfam PF10677 Protein of unknown function (DUF2490) 27 213 5.2E-40 T 28-03-2018 IPR019619 Protein of unknown function DUF2490 CJD35_RS12615 640b0f422690192ec56698dc32eff2e7 204 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 103 187 2.6E-25 T 28-03-2018 IPR020057 Ribosomal protein L25, beta domain CJD35_RS12615 640b0f422690192ec56698dc32eff2e7 204 Gene3D G3DSA:2.170.120.20 101 192 1.9E-26 T 28-03-2018 IPR020057 Ribosomal protein L25, beta domain CJD35_RS12615 640b0f422690192ec56698dc32eff2e7 204 Pfam PF01386 Ribosomal L25p family 7 94 2.8E-26 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CJD35_RS12615 640b0f422690192ec56698dc32eff2e7 204 Gene3D G3DSA:2.40.240.10 4 97 9.8E-31 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CJD35_RS12615 640b0f422690192ec56698dc32eff2e7 204 SUPERFAMILY SSF50715 4 194 3.84E-55 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CJD35_RS12615 640b0f422690192ec56698dc32eff2e7 204 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 97 1.0E-37 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CJD35_RS12615 640b0f422690192ec56698dc32eff2e7 204 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 185 2.5E-41 T 28-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CJD35_RS12615 640b0f422690192ec56698dc32eff2e7 204 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 186 28.624 T 28-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CJD35_RS12485 90603e75f18ef611f359d3af5e8b33d4 264 Gene3D G3DSA:3.40.50.880 1 264 2.8E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS12485 90603e75f18ef611f359d3af5e8b33d4 264 SUPERFAMILY SSF52317 6 259 1.66E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS12485 90603e75f18ef611f359d3af5e8b33d4 264 Pfam PF01965 DJ-1/PfpI family 32 154 1.3E-6 T 28-03-2018 IPR002818 DJ-1/PfpI CJD35_RS03720 9af0af5cbc0806d27399747d9c47d4eb 311 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 117 5.3E-50 T 28-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CJD35_RS03720 9af0af5cbc0806d27399747d9c47d4eb 311 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 4.5E-113 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CJD35_RS03720 9af0af5cbc0806d27399747d9c47d4eb 311 Gene3D G3DSA:3.40.50.2020 1 154 2.6E-65 T 28-03-2018 CJD35_RS03720 9af0af5cbc0806d27399747d9c47d4eb 311 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 125 140 - T 28-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CJD35_RS03720 9af0af5cbc0806d27399747d9c47d4eb 311 SMART SM01400 1 117 1.1E-80 T 28-03-2018 CJD35_RS03720 9af0af5cbc0806d27399747d9c47d4eb 311 SUPERFAMILY SSF53271 66 301 3.33E-62 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CJD35_RS03720 9af0af5cbc0806d27399747d9c47d4eb 311 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 311 48.526 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CJD35_RS03720 9af0af5cbc0806d27399747d9c47d4eb 311 Pfam PF14572 Phosphoribosyl synthetase-associated domain 199 310 3.0E-23 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CJD35_RS03720 9af0af5cbc0806d27399747d9c47d4eb 311 Gene3D G3DSA:3.40.50.2020 155 287 9.4E-35 T 28-03-2018 CJD35_RS03290 b1593f84914576f79f937a7f73ee0966 306 SUPERFAMILY SSF52200 45 141 6.02E-10 T 28-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 CJD35_RS03290 b1593f84914576f79f937a7f73ee0966 306 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 46 225 3.9E-14 T 28-03-2018 IPR015032 MTH538 TIR-like domain CJD35_RS03290 b1593f84914576f79f937a7f73ee0966 306 Gene3D G3DSA:3.40.50.10140 42 188 6.5E-17 T 28-03-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 CJD35_RS00740 40fa659223314153a127eccf437896ec 233 Gene3D G3DSA:3.40.50.1220 4 233 8.6E-54 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS00740 40fa659223314153a127eccf437896ec 233 Pfam PF02146 Sir2 family 13 183 2.6E-42 T 28-03-2018 IPR003000 Sirtuin family GO:0070403 CJD35_RS00740 40fa659223314153a127eccf437896ec 233 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 233 52.743 T 28-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 CJD35_RS00740 40fa659223314153a127eccf437896ec 233 SUPERFAMILY SSF52467 5 231 2.65E-70 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS14335 ea3bd043ce8434c6e8abd87d569e382c 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 5.4E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14335 ea3bd043ce8434c6e8abd87d569e382c 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 5.4E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14335 ea3bd043ce8434c6e8abd87d569e382c 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 5.4E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14335 ea3bd043ce8434c6e8abd87d569e382c 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 5.4E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS14335 ea3bd043ce8434c6e8abd87d569e382c 459 Gene3D G3DSA:1.10.287.130 170 299 3.5E-4 T 28-03-2018 CJD35_RS14335 ea3bd043ce8434c6e8abd87d569e382c 459 SMART SM00387 350 459 3.8E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14335 ea3bd043ce8434c6e8abd87d569e382c 459 SUPERFAMILY SSF47384 248 304 5.89E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS14335 ea3bd043ce8434c6e8abd87d569e382c 459 SUPERFAMILY SSF55874 293 457 4.06E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14335 ea3bd043ce8434c6e8abd87d569e382c 459 Gene3D G3DSA:3.30.565.10 309 459 2.7E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14335 ea3bd043ce8434c6e8abd87d569e382c 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 458 2.0E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS11750 24768e0bfddad4d4f39b90c88a39bd5d 631 TIGRFAM TIGR03108 eps_aminotran_1: exosortase A system-associated amidotransferase 1 1 627 2.0E-282 T 28-03-2018 IPR017539 Exosortase 1 system-associated amidotransferase 1 CJD35_RS11750 24768e0bfddad4d4f39b90c88a39bd5d 631 SUPERFAMILY SSF52402 481 620 2.79E-86 T 28-03-2018 CJD35_RS11750 24768e0bfddad4d4f39b90c88a39bd5d 631 SUPERFAMILY SSF52402 234 382 2.79E-86 T 28-03-2018 CJD35_RS11750 24768e0bfddad4d4f39b90c88a39bd5d 631 Gene3D G3DSA:3.60.20.10 1 223 2.0E-55 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS11750 24768e0bfddad4d4f39b90c88a39bd5d 631 Pfam PF00733 Asparagine synthase 245 624 1.6E-97 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CJD35_RS11750 24768e0bfddad4d4f39b90c88a39bd5d 631 PIRSF PIRSF001589 1 629 2.4E-174 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CJD35_RS11750 24768e0bfddad4d4f39b90c88a39bd5d 631 SUPERFAMILY SSF56235 1 225 5.23E-65 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS11750 24768e0bfddad4d4f39b90c88a39bd5d 631 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 561 2.2E-151 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CJD35_RS11750 24768e0bfddad4d4f39b90c88a39bd5d 631 Pfam PF13537 Glutamine amidotransferase domain 48 168 1.8E-48 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CJD35_RS11750 24768e0bfddad4d4f39b90c88a39bd5d 631 Gene3D G3DSA:3.40.50.620 224 628 9.7E-73 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 SUPERFAMILY SSF51735 4 222 4.45E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 Pfam PF00106 short chain dehydrogenase 4 182 3.5E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 Gene3D G3DSA:3.40.50.720 2 146 5.4E-30 T 28-03-2018 CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 4.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 129 4.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 160 4.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 Gene3D G3DSA:3.40.50.720 147 223 5.8E-20 T 28-03-2018 CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 4.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 4.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 4.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 207 4.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16765 25f76fb2410943b6927a5adaa8f4e5da 223 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 115 131 4.4E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS11260 b96ce7572271008ffb6c8d17a407f179 88 Pfam PF00872 Transposase, Mutator family 2 30 1.5E-4 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CJD35_RS11260 b96ce7572271008ffb6c8d17a407f179 88 Pfam PF00872 Transposase, Mutator family 49 87 3.0E-8 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CJD35_RS10585 1ccd41777b28fbb7d70e5ebf5e9718ae 149 Pfam PF06262 Zincin-like metallopeptidase 50 143 1.0E-29 T 28-03-2018 IPR010428 Zincin-like metallopeptidase CJD35_RS10585 1ccd41777b28fbb7d70e5ebf5e9718ae 149 SUPERFAMILY SSF55486 24 143 5.5E-28 T 28-03-2018 CJD35_RS07315 7ee1503bb3edf949f71a2004c79f2802 480 Gene3D G3DSA:3.30.2290.10 24 232 4.1E-48 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CJD35_RS07315 7ee1503bb3edf949f71a2004c79f2802 480 Pfam PF01523 Putative modulator of DNA gyrase 41 330 1.4E-64 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CJD35_RS07315 7ee1503bb3edf949f71a2004c79f2802 480 PIRSF PIRSF004919 22 479 9.8E-124 T 28-03-2018 IPR025502 TldD CJD35_RS07315 7ee1503bb3edf949f71a2004c79f2802 480 SUPERFAMILY SSF111283 26 476 2.35E-123 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CJD35_RS12665 579e2926e563d68f9c2c98b875038dc9 538 Pfam PF09977 Putative Tad-like Flp pilus-assembly 60 136 1.1E-4 T 28-03-2018 IPR018705 Domain of unknown function DUF2134, membrane CJD35_RS12665 579e2926e563d68f9c2c98b875038dc9 538 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 12 57 3.3E-8 T 28-03-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal CJD35_RS15105 325335c0ef598ab5846dd2666518f947 364 Pfam PF13439 Glycosyltransferase Family 4 18 121 2.3E-11 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS15105 325335c0ef598ab5846dd2666518f947 364 Pfam PF00534 Glycosyl transferases group 1 171 310 2.7E-24 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS15105 325335c0ef598ab5846dd2666518f947 364 SUPERFAMILY SSF53756 10 340 1.26E-54 T 28-03-2018 CJD35_RS15105 325335c0ef598ab5846dd2666518f947 364 Gene3D G3DSA:3.40.50.2000 13 121 4.0E-4 T 28-03-2018 CJD35_RS15105 325335c0ef598ab5846dd2666518f947 364 Gene3D G3DSA:3.40.50.2000 157 336 3.4E-31 T 28-03-2018 CJD35_RS03920 4f16110f27592c3dde3d3ae1a43e4754 317 SUPERFAMILY SSF53597 140 309 4.38E-40 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CJD35_RS03920 4f16110f27592c3dde3d3ae1a43e4754 317 SUPERFAMILY SSF53927 1 138 1.55E-34 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CJD35_RS03920 4f16110f27592c3dde3d3ae1a43e4754 317 Gene3D G3DSA:3.40.140.10 1 119 7.4E-27 T 28-03-2018 CJD35_RS03920 4f16110f27592c3dde3d3ae1a43e4754 317 PIRSF PIRSF006769 230 315 5.1E-10 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CJD35_RS03920 4f16110f27592c3dde3d3ae1a43e4754 317 PIRSF PIRSF006769 1 234 3.2E-83 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CJD35_RS03920 4f16110f27592c3dde3d3ae1a43e4754 317 Pfam PF01872 RibD C-terminal domain 142 286 3.3E-29 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CJD35_RS03920 4f16110f27592c3dde3d3ae1a43e4754 317 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 94 4.6E-15 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CJD35_RS03920 4f16110f27592c3dde3d3ae1a43e4754 317 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 1 219 6.5E-75 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CJD35_RS03920 4f16110f27592c3dde3d3ae1a43e4754 317 Gene3D G3DSA:3.40.430.10 120 227 3.2E-36 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CJD35_RS03920 4f16110f27592c3dde3d3ae1a43e4754 317 Gene3D G3DSA:3.40.430.10 228 315 4.2E-15 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CJD35_RS06140 18c3de9067b2452d2e936210f971050e 141 TIGRFAM TIGR04494 c550_PedF: cytochrome c-550 PedF 12 140 7.0E-64 T 28-03-2018 IPR030991 Cytochrome c-550 PedF CJD35_RS06140 18c3de9067b2452d2e936210f971050e 141 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 58 135 2.2E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS06140 18c3de9067b2452d2e936210f971050e 141 Gene3D G3DSA:1.10.760.10 44 141 4.4E-14 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS06140 18c3de9067b2452d2e936210f971050e 141 SUPERFAMILY SSF46626 43 136 1.98E-17 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS07350 38efbe1f3c4537b3c037a5495e720635 95 SUPERFAMILY SSF47413 38 84 1.28E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS07350 38efbe1f3c4537b3c037a5495e720635 95 Gene3D G3DSA:1.10.260.40 36 88 4.8E-10 T 28-03-2018 CJD35_RS07350 38efbe1f3c4537b3c037a5495e720635 95 SMART SM00530 36 93 0.0011 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS07350 38efbe1f3c4537b3c037a5495e720635 95 Pfam PF13560 Helix-turn-helix domain 38 76 1.2E-6 T 28-03-2018 CJD35_RS16350 111521d6f8fe7393639667d3333cc3da 414 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CJD35_RS16350 111521d6f8fe7393639667d3333cc3da 414 ProSitePatterns PS00216 Sugar transport proteins signature 1. 278 293 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CJD35_RS16350 111521d6f8fe7393639667d3333cc3da 414 Pfam PF07690 Major Facilitator Superfamily 5 356 8.5E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS16350 111521d6f8fe7393639667d3333cc3da 414 Gene3D G3DSA:1.20.1250.20 1 206 1.4E-29 T 28-03-2018 CJD35_RS16350 111521d6f8fe7393639667d3333cc3da 414 SUPERFAMILY SSF103473 2 400 7.46E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS16350 111521d6f8fe7393639667d3333cc3da 414 Gene3D G3DSA:1.20.1250.20 207 405 3.8E-18 T 28-03-2018 CJD35_RS19345 64adc4adc25819fb4798b375dfd127f9 228 SUPERFAMILY SSF52540 1 199 4.53E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS19345 64adc4adc25819fb4798b375dfd127f9 228 Pfam PF07015 VirC1 protein 1 210 3.9E-16 T 28-03-2018 IPR009744 VirC1 CJD35_RS19345 64adc4adc25819fb4798b375dfd127f9 228 Gene3D G3DSA:3.40.50.300 2 226 2.5E-23 T 28-03-2018 CJD35_RS19345 64adc4adc25819fb4798b375dfd127f9 228 PIRSF PIRSF009320 1 225 5.4E-81 T 28-03-2018 CJD35_RS17415 9ced9bff08fa6cfffa169944610df76a 126 SUPERFAMILY SSF54427 2 121 6.64E-32 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS17415 9ced9bff08fa6cfffa169944610df76a 126 Pfam PF11533 Protein of unknown function (DUF3225) 1 122 4.5E-49 T 28-03-2018 IPR024507 Protein of unknown function DUF3225 CJD35_RS17415 9ced9bff08fa6cfffa169944610df76a 126 Gene3D G3DSA:3.10.450.50 2 124 3.4E-20 T 28-03-2018 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 1.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 1.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 258 267 1.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 1.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 148 1.2E-46 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 305 4.3E-108 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 284 295 1.3E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 1.3E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 1.3E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 1.3E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 PRINTS PR00102 Ornithine carbamoyltransferase signature 223 233 1.3E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 157 303 2.1E-47 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 2 306 75.246 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 Gene3D G3DSA:3.40.50.1370 1 164 1.2E-54 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 SUPERFAMILY SSF53671 2 307 5.24E-97 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS03045 7eae08b13a9881bbeb5059e1b9430236 308 Gene3D G3DSA:3.40.50.1370 165 307 3.9E-44 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CJD35_RS15990 d8eb07bd05fcbbfcd9d084957cab8eac 178 SUPERFAMILY SSF53955 38 150 1.16E-19 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS15990 d8eb07bd05fcbbfcd9d084957cab8eac 178 Gene3D G3DSA:1.10.530.10 24 168 1.2E-6 T 28-03-2018 CJD35_RS13135 8a14fe5279c7fe26e19a3d3bbe9f3ea2 408 Gene3D G3DSA:3.60.70.12 14 280 4.4E-88 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CJD35_RS13135 8a14fe5279c7fe26e19a3d3bbe9f3ea2 408 SUPERFAMILY SSF56266 18 405 9.81E-130 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CJD35_RS13135 8a14fe5279c7fe26e19a3d3bbe9f3ea2 408 Pfam PF01960 ArgJ family 26 408 1.7E-132 T 28-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CJD35_RS13135 8a14fe5279c7fe26e19a3d3bbe9f3ea2 408 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 408 142.15 T 28-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CJD35_RS13135 8a14fe5279c7fe26e19a3d3bbe9f3ea2 408 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 27 406 5.0E-138 T 28-03-2018 CJD35_RS13135 8a14fe5279c7fe26e19a3d3bbe9f3ea2 408 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 19 408 2.5E-109 T 28-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 CJD35_RS00965 8d2952ccaa9ac618d9199b90fc8af3dc 213 Pfam PF03458 UPF0126 domain 102 174 1.4E-19 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 CJD35_RS00965 8d2952ccaa9ac618d9199b90fc8af3dc 213 Pfam PF03458 UPF0126 domain 19 89 4.7E-17 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 CJD35_RS01800 41dfbc40e4bf353ed0c75a5d09cc07ea 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CJD35_RS01800 41dfbc40e4bf353ed0c75a5d09cc07ea 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 304 2.1E-117 T 28-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CJD35_RS01800 41dfbc40e4bf353ed0c75a5d09cc07ea 309 Gene3D G3DSA:3.40.50.1100 42 140 5.3E-35 T 28-03-2018 CJD35_RS01800 41dfbc40e4bf353ed0c75a5d09cc07ea 309 SUPERFAMILY SSF53686 4 305 7.86E-90 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS01800 41dfbc40e4bf353ed0c75a5d09cc07ea 309 Gene3D G3DSA:3.40.50.1100 141 306 3.2E-48 T 28-03-2018 CJD35_RS01800 41dfbc40e4bf353ed0c75a5d09cc07ea 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 290 9.7E-64 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS01800 41dfbc40e4bf353ed0c75a5d09cc07ea 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 304 2.8E-114 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CJD35_RS13195 7cb3a188776ef3758168e40269b33c5a 207 Gene3D G3DSA:2.40.70.10 86 196 2.3E-17 T 28-03-2018 IPR021109 Aspartic peptidase domain CJD35_RS13195 7cb3a188776ef3758168e40269b33c5a 207 SUPERFAMILY SSF50630 92 194 3.87E-18 T 28-03-2018 IPR021109 Aspartic peptidase domain CJD35_RS13195 7cb3a188776ef3758168e40269b33c5a 207 Pfam PF13975 gag-polyprotein putative aspartyl protease 101 192 4.6E-20 T 28-03-2018 CJD35_RS13195 7cb3a188776ef3758168e40269b33c5a 207 TIGRFAM TIGR02281 clan_AA_DTGA: clan AA aspartic protease, TIGR02281 family 90 206 1.1E-27 T 28-03-2018 IPR011969 Clan AA aspartic peptidase, C-terminal CJD35_RS13195 7cb3a188776ef3758168e40269b33c5a 207 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 112 123 - T 28-03-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 CJD35_RS03900 ba9d5a5272edb902a870e493e53a23a6 364 SUPERFAMILY SSF51395 1 358 1.37E-115 T 28-03-2018 CJD35_RS03900 ba9d5a5272edb902a870e493e53a23a6 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 3 335 1.4E-84 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CJD35_RS03900 ba9d5a5272edb902a870e493e53a23a6 364 Gene3D G3DSA:3.20.20.70 1 364 3.4E-122 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS15700 1652d5fee3b7ad80fb5ed938884d6210 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 69 1.6E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS15700 1652d5fee3b7ad80fb5ed938884d6210 210 SUPERFAMILY SSF46689 20 94 8.74E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS15700 1652d5fee3b7ad80fb5ed938884d6210 210 Gene3D G3DSA:1.10.10.60 58 189 1.4E-10 T 28-03-2018 CJD35_RS15700 1652d5fee3b7ad80fb5ed938884d6210 210 Gene3D G3DSA:1.10.10.60 15 57 3.7E-13 T 28-03-2018 CJD35_RS06410 dcc0b88440ef135528617a30fddfd459 315 SUPERFAMILY SSF51569 2 283 1.5E-43 T 28-03-2018 CJD35_RS06410 dcc0b88440ef135528617a30fddfd459 315 Gene3D G3DSA:3.20.20.70 1 279 3.5E-34 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS06410 dcc0b88440ef135528617a30fddfd459 315 Pfam PF00682 HMGL-like 125 268 3.3E-7 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CJD35_RS07445 7103ef759e9120654693b35b88c6d6ed 963 Gene3D G3DSA:3.40.50.1460 747 963 2.5E-17 T 28-03-2018 CJD35_RS07445 7103ef759e9120654693b35b88c6d6ed 963 Pfam PF13424 Tetratricopeptide repeat 177 245 2.9E-10 T 28-03-2018 CJD35_RS07445 7103ef759e9120654693b35b88c6d6ed 963 SUPERFAMILY SSF48452 176 289 1.18E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS07445 7103ef759e9120654693b35b88c6d6ed 963 Pfam PF12770 CHAT domain 649 962 1.7E-49 T 28-03-2018 IPR024983 CHAT domain CJD35_RS07445 7103ef759e9120654693b35b88c6d6ed 963 Gene3D G3DSA:1.10.10.10 231 309 4.6E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07445 7103ef759e9120654693b35b88c6d6ed 963 Gene3D G3DSA:1.10.10.10 310 416 0.33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07445 7103ef759e9120654693b35b88c6d6ed 963 Gene3D G3DSA:1.10.10.10 172 230 1.2E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07445 7103ef759e9120654693b35b88c6d6ed 963 SUPERFAMILY SSF48452 252 369 2.05E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS07445 7103ef759e9120654693b35b88c6d6ed 963 Gene3D G3DSA:1.25.40.10 524 614 0.22 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS07445 7103ef759e9120654693b35b88c6d6ed 963 Pfam PF13374 Tetratricopeptide repeat 258 292 3.8E-5 T 28-03-2018 CJD35_RS05655 bc1042549106c1b4b51906eec1fc15b9 146 Pfam PF03653 Uncharacterised protein family (UPF0093) 6 146 1.3E-49 T 28-03-2018 IPR005265 Uncharacterised protein family UPF0093 CJD35_RS05655 bc1042549106c1b4b51906eec1fc15b9 146 PIRSF PIRSF004638 1 146 3.9E-45 T 28-03-2018 IPR005265 Uncharacterised protein family UPF0093 CJD35_RS09050 0f6efe244d812737ff2bc28a8fd824b5 211 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 209 1.4E-97 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CJD35_RS09050 0f6efe244d812737ff2bc28a8fd824b5 211 Gene3D G3DSA:3.40.1080.10 3 211 1.6E-70 T 28-03-2018 CJD35_RS09050 0f6efe244d812737ff2bc28a8fd824b5 211 SMART SM00882 6 204 1.0E-79 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS09050 0f6efe244d812737ff2bc28a8fd824b5 211 SUPERFAMILY SSF100950 3 209 3.91E-73 T 28-03-2018 CJD35_RS09050 0f6efe244d812737ff2bc28a8fd824b5 211 Pfam PF01144 Coenzyme A transferase 7 202 3.5E-41 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS13110 a395008a0fe29a4622ccd1d5cba1054f 236 SUPERFAMILY SSF53448 4 232 2.48E-45 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS13110 a395008a0fe29a4622ccd1d5cba1054f 236 Gene3D G3DSA:3.90.550.10 1 235 1.7E-35 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS13110 a395008a0fe29a4622ccd1d5cba1054f 236 Pfam PF00483 Nucleotidyl transferase 5 112 2.0E-14 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 SUPERFAMILY SSF53633 18 269 1.2E-58 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 Gene3D G3DSA:2.30.130.10 288 379 2.1E-27 T 28-03-2018 IPR002478 PUA domain GO:0003723 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 Pfam PF00696 Amino acid kinase family 19 248 1.4E-40 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 Pfam PF01472 PUA domain 290 360 4.4E-24 T 28-03-2018 IPR002478 PUA domain GO:0003723 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 TIGRFAM TIGR01027 proB: glutamate 5-kinase 18 378 1.3E-112 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 Gene3D G3DSA:3.40.1160.10 17 279 5.8E-53 T 28-03-2018 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 SMART SM00359 290 371 2.4E-20 T 28-03-2018 IPR002478 PUA domain GO:0003723 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 Hamap MF_00456 Glutamate 5-kinase [proB]. 18 275 32.981 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 ProSitePatterns PS00902 Glutamate 5-kinase signature. 222 239 - T 28-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 PRINTS PR00474 Glutamate 5-kinase family signature 55 69 8.6E-48 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 PRINTS PR00474 Glutamate 5-kinase family signature 130 151 8.6E-48 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 PRINTS PR00474 Glutamate 5-kinase family signature 224 244 8.6E-48 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 PRINTS PR00474 Glutamate 5-kinase family signature 90 118 8.6E-48 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 PRINTS PR00474 Glutamate 5-kinase family signature 162 189 8.6E-48 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 SUPERFAMILY SSF88697 289 379 3.65E-25 T 28-03-2018 IPR015947 PUA-like domain CJD35_RS10625 7826e4d7e51eb7558e91a784afe404b2 380 PIRSF PIRSF000729 15 380 2.7E-112 T 28-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CJD35_RS12860 7b2adcf8b84d1dcee6c0d9e3a86f051e 182 SUPERFAMILY SSF82153 37 182 3.4E-41 T 28-03-2018 IPR000782 FAS1 domain CJD35_RS12860 7b2adcf8b84d1dcee6c0d9e3a86f051e 182 Pfam PF02469 Fasciclin domain 48 182 9.1E-34 T 28-03-2018 IPR000782 FAS1 domain CJD35_RS12860 7b2adcf8b84d1dcee6c0d9e3a86f051e 182 Gene3D G3DSA:2.30.180.10 37 182 1.6E-37 T 28-03-2018 IPR000782 FAS1 domain CJD35_RS12860 7b2adcf8b84d1dcee6c0d9e3a86f051e 182 SMART SM00554 72 182 2.8E-25 T 28-03-2018 IPR000782 FAS1 domain CJD35_RS13320 7bb0d968ec638e47af079b9ca27dce7b 96 Pfam PF04002 RadC-like JAB domain 24 94 1.0E-6 T 28-03-2018 IPR025657 RadC-like JAB domain CJD35_RS13320 7bb0d968ec638e47af079b9ca27dce7b 96 Gene3D G3DSA:3.40.140.10 17 96 6.2E-9 T 28-03-2018 CJD35_RS07975 5ac3fc138808ebee97a55a2d5e4c7043 637 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 59 424 6.5E-41 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CJD35_RS07975 5ac3fc138808ebee97a55a2d5e4c7043 637 Gene3D G3DSA:3.40.50.1700 449 495 1.1E-4 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CJD35_RS07975 5ac3fc138808ebee97a55a2d5e4c7043 637 SUPERFAMILY SSF52279 464 634 2.35E-15 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CJD35_RS07975 5ac3fc138808ebee97a55a2d5e4c7043 637 Gene3D G3DSA:3.40.50.1700 496 635 3.1E-10 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CJD35_RS07975 5ac3fc138808ebee97a55a2d5e4c7043 637 PRINTS PR00133 Glycosyl hydrolase family 3 signature 205 221 6.1E-13 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CJD35_RS07975 5ac3fc138808ebee97a55a2d5e4c7043 637 PRINTS PR00133 Glycosyl hydrolase family 3 signature 243 259 6.1E-13 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CJD35_RS07975 5ac3fc138808ebee97a55a2d5e4c7043 637 PRINTS PR00133 Glycosyl hydrolase family 3 signature 327 345 6.1E-13 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CJD35_RS07975 5ac3fc138808ebee97a55a2d5e4c7043 637 PRINTS PR00133 Glycosyl hydrolase family 3 signature 159 178 6.1E-13 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CJD35_RS07975 5ac3fc138808ebee97a55a2d5e4c7043 637 PRINTS PR00133 Glycosyl hydrolase family 3 signature 128 144 6.1E-13 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CJD35_RS07975 5ac3fc138808ebee97a55a2d5e4c7043 637 SUPERFAMILY SSF51445 37 462 4.63E-79 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CJD35_RS07975 5ac3fc138808ebee97a55a2d5e4c7043 637 Gene3D G3DSA:3.20.20.300 35 446 2.4E-90 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CJD35_RS13115 b8a4bb7793a2cece8d93f1883a39fcb6 989 Gene3D G3DSA:3.90.320.10 673 889 5.7E-13 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CJD35_RS13115 b8a4bb7793a2cece8d93f1883a39fcb6 989 SUPERFAMILY SSF52540 338 677 1.18E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13115 b8a4bb7793a2cece8d93f1883a39fcb6 989 Gene3D G3DSA:3.40.50.300 298 661 4.9E-6 T 28-03-2018 CJD35_RS13115 b8a4bb7793a2cece8d93f1883a39fcb6 989 TIGRFAM TIGR02786 addB_alphas: double-strand break repair protein AddB 9 983 1.3E-261 T 28-03-2018 IPR014153 Double-strand break repair protein AddB CJD35_RS13115 b8a4bb7793a2cece8d93f1883a39fcb6 989 Pfam PF12705 PD-(D/E)XK nuclease superfamily 722 960 9.4E-22 T 28-03-2018 CJD35_RS15170 fb2f9c2f1e025ded4eb343adda8a68c8 693 Gene3D G3DSA:2.170.130.10 21 154 2.1E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15170 fb2f9c2f1e025ded4eb343adda8a68c8 693 Pfam PF00593 TonB dependent receptor 224 690 4.0E-33 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15170 fb2f9c2f1e025ded4eb343adda8a68c8 693 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 149 6.7E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15170 fb2f9c2f1e025ded4eb343adda8a68c8 693 SUPERFAMILY SSF56935 32 264 5.73E-88 T 28-03-2018 CJD35_RS15170 fb2f9c2f1e025ded4eb343adda8a68c8 693 SUPERFAMILY SSF56935 298 693 5.73E-88 T 28-03-2018 CJD35_RS15170 fb2f9c2f1e025ded4eb343adda8a68c8 693 Gene3D G3DSA:2.40.170.20 160 693 5.4E-47 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 SUPERFAMILY SSF51735 5 245 5.51E-75 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 244 1.9E-62 T 28-03-2018 CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 2.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 2.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 2.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 9.9E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 136 9.9E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 9.9E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 Gene3D G3DSA:3.40.50.720 1 44 7.5E-8 T 28-03-2018 CJD35_RS16430 57f5de74abdde1cd47a2450436b1ebf3 249 Gene3D G3DSA:3.40.50.720 45 247 3.1E-57 T 28-03-2018 CJD35_RS00705 ea1aee79410d6639926b3fed290bd4a6 211 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 11 200 5.4E-94 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJD35_RS00705 ea1aee79410d6639926b3fed290bd4a6 211 Gene3D G3DSA:3.90.226.10 11 203 5.2E-45 T 28-03-2018 CJD35_RS00705 ea1aee79410d6639926b3fed290bd4a6 211 SUPERFAMILY SSF52096 20 205 4.97E-72 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS00705 ea1aee79410d6639926b3fed290bd4a6 211 Pfam PF00574 Clp protease 22 201 3.2E-83 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CJD35_RS00705 ea1aee79410d6639926b3fed290bd4a6 211 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 12 202 41.667 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJD35_RS00705 ea1aee79410d6639926b3fed290bd4a6 211 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 99 110 - T 28-03-2018 IPR018215 ClpP, Ser active site CJD35_RS00705 ea1aee79410d6639926b3fed290bd4a6 211 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 9.8E-49 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJD35_RS00705 ea1aee79410d6639926b3fed290bd4a6 211 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 9.8E-49 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJD35_RS00705 ea1aee79410d6639926b3fed290bd4a6 211 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 9.8E-49 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJD35_RS00705 ea1aee79410d6639926b3fed290bd4a6 211 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 9.8E-49 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJD35_RS00705 ea1aee79410d6639926b3fed290bd4a6 211 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 9.8E-49 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJD35_RS02995 64a4ad8f7163004a53c993593ff8067a 300 Pfam PF01218 Coproporphyrinogen III oxidase 27 300 2.5E-91 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CJD35_RS02995 64a4ad8f7163004a53c993593ff8067a 300 PIRSF PIRSF000166 11 300 7.5E-106 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CJD35_RS02995 64a4ad8f7163004a53c993593ff8067a 300 PRINTS PR00073 Coprogen oxidase signature 145 167 3.4E-41 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CJD35_RS02995 64a4ad8f7163004a53c993593ff8067a 300 PRINTS PR00073 Coprogen oxidase signature 285 300 3.4E-41 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CJD35_RS02995 64a4ad8f7163004a53c993593ff8067a 300 PRINTS PR00073 Coprogen oxidase signature 257 284 3.4E-41 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CJD35_RS02995 64a4ad8f7163004a53c993593ff8067a 300 PRINTS PR00073 Coprogen oxidase signature 182 211 3.4E-41 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CJD35_RS02995 64a4ad8f7163004a53c993593ff8067a 300 PRINTS PR00073 Coprogen oxidase signature 51 67 3.4E-41 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CJD35_RS02995 64a4ad8f7163004a53c993593ff8067a 300 SUPERFAMILY SSF102886 18 299 7.72E-110 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CJD35_RS02995 64a4ad8f7163004a53c993593ff8067a 300 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 19 300 50.608 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CJD35_RS02995 64a4ad8f7163004a53c993593ff8067a 300 Gene3D G3DSA:3.40.1500.10 15 300 3.7E-111 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CJD35_RS17755 5788b4b408b77a4f1beb224f22c768a5 300 Pfam PF00106 short chain dehydrogenase 8 192 9.9E-44 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17755 5788b4b408b77a4f1beb224f22c768a5 300 Gene3D G3DSA:3.40.50.720 1 272 3.7E-52 T 28-03-2018 CJD35_RS17755 5788b4b408b77a4f1beb224f22c768a5 300 SUPERFAMILY SSF51735 1 247 2.82E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS17755 5788b4b408b77a4f1beb224f22c768a5 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17755 5788b4b408b77a4f1beb224f22c768a5 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17755 5788b4b408b77a4f1beb224f22c768a5 300 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17755 5788b4b408b77a4f1beb224f22c768a5 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.9E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17755 5788b4b408b77a4f1beb224f22c768a5 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.9E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17755 5788b4b408b77a4f1beb224f22c768a5 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.9E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17755 5788b4b408b77a4f1beb224f22c768a5 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.9E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17755 5788b4b408b77a4f1beb224f22c768a5 300 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 3.9E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15025 10c3c7761e5fd400ec6bdd0d719db264 394 Pfam PF07690 Major Facilitator Superfamily 33 353 9.4E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS15025 10c3c7761e5fd400ec6bdd0d719db264 394 Gene3D G3DSA:1.20.1250.20 15 204 3.5E-9 T 28-03-2018 CJD35_RS15025 10c3c7761e5fd400ec6bdd0d719db264 394 SUPERFAMILY SSF103473 22 384 5.62E-23 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS15025 10c3c7761e5fd400ec6bdd0d719db264 394 Gene3D G3DSA:1.20.1250.20 212 387 7.3E-10 T 28-03-2018 CJD35_RS19765 cf2379d56942a77c0b550bff689f0574 218 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 20 210 1.1E-63 T 28-03-2018 IPR014114 Type-F conjugative transfer system protein TraW CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 262 270 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 SUPERFAMILY SSF51735 122 282 1.2E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 283 1.5E-60 T 28-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 120 1.1E-33 T 28-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 Hamap MF_01576 Bifunctional protein FolD [folD]. 2 285 36.053 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 4.0E-74 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 258 276 4.0E-74 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 4.0E-74 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 4.0E-74 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 4.0E-74 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 4.0E-74 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 Gene3D G3DSA:3.40.50.10860 10 138 8.4E-43 T 28-03-2018 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 SUPERFAMILY SSF53223 1 121 3.64E-36 T 28-03-2018 CJD35_RS16395 68a68ea5ab7a07d21be610331989b77a 287 Gene3D G3DSA:3.40.50.720 139 266 4.2E-33 T 28-03-2018 CJD35_RS00775 11ffc58f28c1eac5f75d71513ad452fd 124 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 24 97 6.9E-17 T 28-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 CJD35_RS00775 11ffc58f28c1eac5f75d71513ad452fd 124 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 17 113 5.1E-32 T 28-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 CJD35_RS04625 8d62ef45bc56b66d6476fbd5ef5a6b3a 280 SUPERFAMILY SSF53335 9 256 4.4E-53 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS04625 8d62ef45bc56b66d6476fbd5ef5a6b3a 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 177 183 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJD35_RS04625 8d62ef45bc56b66d6476fbd5ef5a6b3a 280 Gene3D G3DSA:3.40.50.150 76 272 2.6E-45 T 28-03-2018 CJD35_RS04625 8d62ef45bc56b66d6476fbd5ef5a6b3a 280 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 22 265 1.6E-75 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CJD35_RS04625 8d62ef45bc56b66d6476fbd5ef5a6b3a 280 Pfam PF13847 Methyltransferase domain 109 193 2.7E-13 T 28-03-2018 IPR025714 Methyltransferase domain CJD35_RS04625 8d62ef45bc56b66d6476fbd5ef5a6b3a 280 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 1 269 38.398 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CJD35_RS04625 8d62ef45bc56b66d6476fbd5ef5a6b3a 280 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 269 5.5E-55 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CJD35_RS04625 8d62ef45bc56b66d6476fbd5ef5a6b3a 280 Gene3D G3DSA:1.10.8.10 1 75 2.2E-16 T 28-03-2018 CJD35_RS03050 4acb60cdb5e68c680aa959ebf78fddda 398 Pfam PF00202 Aminotransferase class-III 17 386 2.6E-120 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS03050 4acb60cdb5e68c680aa959ebf78fddda 398 Gene3D G3DSA:3.90.1150.10 3 158 1.8E-46 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS03050 4acb60cdb5e68c680aa959ebf78fddda 398 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 212 249 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS03050 4acb60cdb5e68c680aa959ebf78fddda 398 SUPERFAMILY SSF53383 4 386 3.26E-130 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS03050 4acb60cdb5e68c680aa959ebf78fddda 398 Gene3D G3DSA:3.40.640.10 160 281 1.2E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS03050 4acb60cdb5e68c680aa959ebf78fddda 398 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 390 44.07 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CJD35_RS03050 4acb60cdb5e68c680aa959ebf78fddda 398 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 7 386 1.0E-140 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CJD35_RS03050 4acb60cdb5e68c680aa959ebf78fddda 398 PIRSF PIRSF000521 160 391 1.1E-40 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS03050 4acb60cdb5e68c680aa959ebf78fddda 398 PIRSF PIRSF000521 16 148 2.4E-10 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS03050 4acb60cdb5e68c680aa959ebf78fddda 398 Gene3D G3DSA:3.90.1150.10 282 392 8.3E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS07305 4c3763f700554db1006f206118259c3b 112 SUPERFAMILY SSF54913 1 112 1.05E-42 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CJD35_RS07305 4c3763f700554db1006f206118259c3b 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CJD35_RS07305 4c3763f700554db1006f206118259c3b 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CJD35_RS07305 4c3763f700554db1006f206118259c3b 112 SMART SM00938 4 105 1.6E-60 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS07305 4c3763f700554db1006f206118259c3b 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 3.5E-39 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS07305 4c3763f700554db1006f206118259c3b 112 PIRSF PIRSF039144 1 112 1.7E-50 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS07305 4c3763f700554db1006f206118259c3b 112 Gene3D G3DSA:3.30.70.120 1 109 9.3E-47 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJD35_RS07305 4c3763f700554db1006f206118259c3b 112 PRINTS PR00340 P-II protein signature 2 17 1.3E-37 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS07305 4c3763f700554db1006f206118259c3b 112 PRINTS PR00340 P-II protein signature 52 75 1.3E-37 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS07305 4c3763f700554db1006f206118259c3b 112 PRINTS PR00340 P-II protein signature 83 103 1.3E-37 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS07305 4c3763f700554db1006f206118259c3b 112 PRINTS PR00340 P-II protein signature 23 41 1.3E-37 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS15945 ab188ef2f5008650ee7eb3ef66ef1ef7 577 Gene3D G3DSA:2.170.130.10 26 164 3.4E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15945 ab188ef2f5008650ee7eb3ef66ef1ef7 577 Pfam PF00593 TonB dependent receptor 282 566 1.2E-16 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15945 ab188ef2f5008650ee7eb3ef66ef1ef7 577 SUPERFAMILY SSF56935 28 560 2.09E-73 T 28-03-2018 CJD35_RS15945 ab188ef2f5008650ee7eb3ef66ef1ef7 577 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 155 3.4E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15945 ab188ef2f5008650ee7eb3ef66ef1ef7 577 Gene3D G3DSA:2.40.170.20 165 573 1.2E-39 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15000 7970ba00db1eda0cdbf0349c821aef02 162 Gene3D G3DSA:3.10.180.10 1 155 3.5E-25 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS15000 7970ba00db1eda0cdbf0349c821aef02 162 SUPERFAMILY SSF54593 9 135 3.62E-26 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS15000 7970ba00db1eda0cdbf0349c821aef02 162 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 131 2.4E-18 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS19850 45544750ad6e2658b899749bffe6cb24 204 Gene3D G3DSA:1.10.10.10 73 141 2.4E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19850 45544750ad6e2658b899749bffe6cb24 204 Gene3D G3DSA:1.10.10.10 142 204 6.0E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS09500 774f14aad8aa8bbb1fae65595ef9a0a6 145 SUPERFAMILY SSF102400 1 136 4.05E-30 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CJD35_RS09500 774f14aad8aa8bbb1fae65595ef9a0a6 145 Gene3D G3DSA:3.40.50.10110 1 137 8.5E-25 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CJD35_RS09500 774f14aad8aa8bbb1fae65595ef9a0a6 145 Pfam PF04364 DNA polymerase III chi subunit, HolC 2 126 1.8E-23 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CJD35_RS11245 e2c1a16fc6423cb807f4d0c36b65845d 305 SUPERFAMILY SSF53448 40 253 2.34E-36 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS11245 e2c1a16fc6423cb807f4d0c36b65845d 305 Pfam PF00535 Glycosyl transferase family 2 41 185 1.6E-18 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS11245 e2c1a16fc6423cb807f4d0c36b65845d 305 Gene3D G3DSA:3.90.550.10 13 295 9.3E-32 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS04955 611ae8b6c718fcd4dc3f1c60c74392d9 251 PRINTS PR00111 Alpha/beta hydrolase fold signature 102 115 2.7E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS04955 611ae8b6c718fcd4dc3f1c60c74392d9 251 PRINTS PR00111 Alpha/beta hydrolase fold signature 116 129 2.7E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS04955 611ae8b6c718fcd4dc3f1c60c74392d9 251 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 2.7E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS04955 611ae8b6c718fcd4dc3f1c60c74392d9 251 Gene3D G3DSA:3.40.50.1820 10 250 5.1E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS04955 611ae8b6c718fcd4dc3f1c60c74392d9 251 SUPERFAMILY SSF53474 12 139 6.7E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS04955 611ae8b6c718fcd4dc3f1c60c74392d9 251 SUPERFAMILY SSF53474 167 249 6.7E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS04955 611ae8b6c718fcd4dc3f1c60c74392d9 251 Pfam PF12146 Serine aminopeptidase, S33 31 134 9.6E-10 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 CJD35_RS22135 62926797198e4f5f01896bf9af12146e 472 Pfam PF05045 Rhamnan synthesis protein F 229 442 1.4E-35 T 28-03-2018 IPR007739 Rhamnan synthesis F CJD35_RS09000 060555a41ee216221f61e1b234beb035 586 Pfam PF00501 AMP-binding enzyme 63 475 7.6E-70 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJD35_RS09000 060555a41ee216221f61e1b234beb035 586 Gene3D G3DSA:3.30.300.30 469 574 1.3E-17 T 28-03-2018 CJD35_RS09000 060555a41ee216221f61e1b234beb035 586 Gene3D G3DSA:3.40.50.980 30 196 1.4E-23 T 28-03-2018 CJD35_RS09000 060555a41ee216221f61e1b234beb035 586 Gene3D G3DSA:3.40.50.980 197 372 4.1E-31 T 28-03-2018 CJD35_RS09000 060555a41ee216221f61e1b234beb035 586 SUPERFAMILY SSF56801 51 577 1.83E-100 T 28-03-2018 CJD35_RS09000 060555a41ee216221f61e1b234beb035 586 Gene3D G3DSA:2.30.38.10 397 468 5.3E-20 T 28-03-2018 CJD35_RS17950 95a65aaf789607afca65f7ef06aa1edc 726 Gene3D G3DSA:2.40.170.20 174 726 2.8E-66 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17950 95a65aaf789607afca65f7ef06aa1edc 726 SUPERFAMILY SSF56935 32 726 9.16E-107 T 28-03-2018 CJD35_RS17950 95a65aaf789607afca65f7ef06aa1edc 726 Pfam PF00593 TonB dependent receptor 262 722 1.0E-36 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17950 95a65aaf789607afca65f7ef06aa1edc 726 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 159 2.7E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17950 95a65aaf789607afca65f7ef06aa1edc 726 Gene3D G3DSA:2.170.130.10 37 164 1.2E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS09295 b1f8a6823725c9e56c7a3bc0d3640665 134 Gene3D G3DSA:3.40.50.510 1 134 2.7E-35 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CJD35_RS09295 b1f8a6823725c9e56c7a3bc0d3640665 134 Pfam PF03610 PTS system fructose IIA component 3 114 3.6E-28 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CJD35_RS09295 b1f8a6823725c9e56c7a3bc0d3640665 134 SUPERFAMILY SSF53062 1 130 1.2E-35 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CJD35_RS19475 222c90479c6e0b80382680ef8c3962c0 86 Pfam PF13683 Integrase core domain 17 82 3.7E-29 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CJD35_RS19475 222c90479c6e0b80382680ef8c3962c0 86 Gene3D G3DSA:3.30.420.10 1 84 8.9E-19 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS19475 222c90479c6e0b80382680ef8c3962c0 86 SUPERFAMILY SSF53098 1 83 4.1E-21 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS04845 f6d0f10dfc5687b724b0607ae960955e 247 Gene3D G3DSA:3.40.30.10 57 246 7.6E-32 T 28-03-2018 CJD35_RS04845 f6d0f10dfc5687b724b0607ae960955e 247 SUPERFAMILY SSF52833 52 243 1.3E-27 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS04845 f6d0f10dfc5687b724b0607ae960955e 247 Pfam PF13462 Thioredoxin 58 241 1.2E-28 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS10865 5475522d439ad2586838dfb23b0135cf 553 Pfam PF05977 Transmembrane secretion effector 11 528 1.0E-190 T 28-03-2018 IPR010290 Transmembrane secretion effector CJD35_RS10865 5475522d439ad2586838dfb23b0135cf 553 SUPERFAMILY SSF103473 17 402 3.92E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS10865 5475522d439ad2586838dfb23b0135cf 553 Gene3D G3DSA:1.20.1250.20 11 208 2.1E-19 T 28-03-2018 CJD35_RS10865 5475522d439ad2586838dfb23b0135cf 553 Gene3D G3DSA:1.20.1250.20 215 414 5.2E-15 T 28-03-2018 CJD35_RS10865 5475522d439ad2586838dfb23b0135cf 553 Gene3D G3DSA:3.30.70.100 419 498 1.3E-5 T 28-03-2018 CJD35_RS17715 0a96eb383dc99c8e5bca3b94a67ceb06 826 Gene3D G3DSA:2.40.170.20 177 826 1.9E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17715 0a96eb383dc99c8e5bca3b94a67ceb06 826 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 167 4.5E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17715 0a96eb383dc99c8e5bca3b94a67ceb06 826 SUPERFAMILY SSF56935 252 303 1.95E-113 T 28-03-2018 CJD35_RS17715 0a96eb383dc99c8e5bca3b94a67ceb06 826 SUPERFAMILY SSF56935 342 504 1.95E-113 T 28-03-2018 CJD35_RS17715 0a96eb383dc99c8e5bca3b94a67ceb06 826 SUPERFAMILY SSF56935 548 826 1.95E-113 T 28-03-2018 CJD35_RS17715 0a96eb383dc99c8e5bca3b94a67ceb06 826 SUPERFAMILY SSF56935 31 225 1.95E-113 T 28-03-2018 CJD35_RS17715 0a96eb383dc99c8e5bca3b94a67ceb06 826 Pfam PF00593 TonB dependent receptor 333 823 8.1E-42 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17715 0a96eb383dc99c8e5bca3b94a67ceb06 826 Gene3D G3DSA:2.170.130.10 34 176 8.4E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17495 f9d35889fe245969797fba36c666dc12 524 Pfam PF00962 Adenosine/AMP deaminase 234 453 3.2E-23 T 28-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CJD35_RS17495 f9d35889fe245969797fba36c666dc12 524 SUPERFAMILY SSF51556 130 453 3.11E-52 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS17495 f9d35889fe245969797fba36c666dc12 524 SUPERFAMILY SSF51556 47 96 3.11E-52 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS17495 f9d35889fe245969797fba36c666dc12 524 Gene3D G3DSA:3.20.20.140 26 510 1.6E-68 T 28-03-2018 CJD35_RS20165 3db26a9079339989baaba929c4d55f2a 92 SUPERFAMILY SSF51197 2 89 7.69E-28 T 28-03-2018 CJD35_RS20165 3db26a9079339989baaba929c4d55f2a 92 Pfam PF09313 Domain of unknown function (DUF1971) 9 82 5.7E-25 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 CJD35_RS20165 3db26a9079339989baaba929c4d55f2a 92 Gene3D G3DSA:2.60.120.10 2 91 6.1E-29 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS16340 8bd9396ed22e843d1b06a7002e8028ce 150 Gene3D G3DSA:3.10.450.50 13 147 3.4E-24 T 28-03-2018 CJD35_RS16340 8bd9396ed22e843d1b06a7002e8028ce 150 Pfam PF13577 SnoaL-like domain 28 142 2.3E-15 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS16340 8bd9396ed22e843d1b06a7002e8028ce 150 SUPERFAMILY SSF54427 28 145 3.69E-25 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS18830 1f983280b5e7cc29e69ca04f241abf61 158 Gene3D G3DSA:2.60.40.790 5 139 7.8E-25 T 28-03-2018 IPR008978 HSP20-like chaperone CJD35_RS18830 1f983280b5e7cc29e69ca04f241abf61 158 Pfam PF00011 Hsp20/alpha crystallin family 43 138 6.0E-19 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CJD35_RS18830 1f983280b5e7cc29e69ca04f241abf61 158 SUPERFAMILY SSF49764 12 139 5.23E-23 T 28-03-2018 IPR008978 HSP20-like chaperone CJD35_RS09605 6be5146325336801966e830c12ab4f86 171 Pfam PF10691 Protein of unknown function (DUF2497) 100 169 2.1E-22 T 28-03-2018 IPR019632 Protein of unknown function DUF2497 CJD35_RS16545 e202e57010a24fbbea91f0adf6c1053e 216 Gene3D G3DSA:3.40.50.2300 3 140 2.9E-28 T 28-03-2018 CJD35_RS16545 e202e57010a24fbbea91f0adf6c1053e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 1.8E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS16545 e202e57010a24fbbea91f0adf6c1053e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 1.8E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS16545 e202e57010a24fbbea91f0adf6c1053e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 1.8E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS16545 e202e57010a24fbbea91f0adf6c1053e 216 Gene3D G3DSA:1.10.10.10 141 208 1.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16545 e202e57010a24fbbea91f0adf6c1053e 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 1.9E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS16545 e202e57010a24fbbea91f0adf6c1053e 216 SUPERFAMILY SSF52172 4 149 2.13E-28 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS16545 e202e57010a24fbbea91f0adf6c1053e 216 SUPERFAMILY SSF46894 130 200 9.18E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS16545 e202e57010a24fbbea91f0adf6c1053e 216 SMART SM00421 138 195 7.5E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS16545 e202e57010a24fbbea91f0adf6c1053e 216 Pfam PF00072 Response regulator receiver domain 5 114 9.9E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS16545 e202e57010a24fbbea91f0adf6c1053e 216 SMART SM00448 3 114 5.4E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS12120 d4dddecd8a3849eb7371585148c5491e 231 TIGRFAM TIGR00608 radc: DNA repair protein RadC 18 231 5.1E-58 T 28-03-2018 IPR001405 RadC protein CJD35_RS12120 d4dddecd8a3849eb7371585148c5491e 231 SUPERFAMILY SSF47781 27 90 6.99E-8 T 28-03-2018 IPR010994 RuvA domain 2-like CJD35_RS12120 d4dddecd8a3849eb7371585148c5491e 231 Pfam PF04002 RadC-like JAB domain 111 229 4.7E-39 T 28-03-2018 IPR025657 RadC-like JAB domain CJD35_RS12120 d4dddecd8a3849eb7371585148c5491e 231 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 180 185 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CJD35_RS12120 d4dddecd8a3849eb7371585148c5491e 231 SUPERFAMILY SSF102712 156 197 1.7E-5 T 28-03-2018 CJD35_RS12120 d4dddecd8a3849eb7371585148c5491e 231 Gene3D G3DSA:3.40.140.10 112 231 2.5E-43 T 28-03-2018 CJD35_RS12120 d4dddecd8a3849eb7371585148c5491e 231 Gene3D G3DSA:1.10.150.20 34 111 1.1E-5 T 28-03-2018 CJD35_RS11670 af3bf69210c5cf16a5d7262d11adbff8 245 Gene3D G3DSA:3.60.20.10 2 228 6.1E-36 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS11670 af3bf69210c5cf16a5d7262d11adbff8 245 SUPERFAMILY SSF56235 2 242 8.14E-33 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS11670 af3bf69210c5cf16a5d7262d11adbff8 245 Pfam PF00227 Proteasome subunit 4 192 2.8E-7 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CJD35_RS11670 af3bf69210c5cf16a5d7262d11adbff8 245 PIRSF PIRSF009120 1 245 1.7E-94 T 28-03-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 CJD35_RS07585 1442ed44590eb83e50cd2e44b301a2d5 193 Pfam PF00583 Acetyltransferase (GNAT) family 31 145 3.7E-6 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS07585 1442ed44590eb83e50cd2e44b301a2d5 193 SUPERFAMILY SSF55729 10 167 1.69E-14 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS07585 1442ed44590eb83e50cd2e44b301a2d5 193 Gene3D G3DSA:3.40.630.30 4 185 2.4E-15 T 28-03-2018 CJD35_RS07955 6763e708f9f77b2fea56586b3c66506c 231 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 25 222 2.4E-51 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS07955 6763e708f9f77b2fea56586b3c66506c 231 Gene3D G3DSA:3.90.850.10 7 228 1.7E-71 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS07955 6763e708f9f77b2fea56586b3c66506c 231 SUPERFAMILY SSF56529 21 225 5.23E-66 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS07030 39e6a9cc351df7700354c1e909d5f623 655 Pfam PF03169 OPT oligopeptide transporter protein 13 607 8.2E-97 T 28-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 CJD35_RS07030 39e6a9cc351df7700354c1e909d5f623 655 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 10 609 1.2E-100 T 28-03-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 CJD35_RS07030 39e6a9cc351df7700354c1e909d5f623 655 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 13 610 1.2E-211 T 28-03-2018 IPR004814 Oligopeptide transporter OPT CJD35_RS22240 856f1c38ae0ad74fa7e12b75aeea63c7 969 Pfam PF01526 Tn3 transposase DDE domain 565 954 7.9E-133 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS22240 856f1c38ae0ad74fa7e12b75aeea63c7 969 Pfam PF13700 Domain of unknown function (DUF4158) 9 152 4.1E-22 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CJD35_RS21645 856f1c38ae0ad74fa7e12b75aeea63c7 969 Pfam PF01526 Tn3 transposase DDE domain 565 954 7.9E-133 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS21645 856f1c38ae0ad74fa7e12b75aeea63c7 969 Pfam PF13700 Domain of unknown function (DUF4158) 9 152 4.1E-22 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CJD35_RS19365 856f1c38ae0ad74fa7e12b75aeea63c7 969 Pfam PF01526 Tn3 transposase DDE domain 565 954 7.9E-133 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS19365 856f1c38ae0ad74fa7e12b75aeea63c7 969 Pfam PF13700 Domain of unknown function (DUF4158) 9 152 4.1E-22 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CJD35_RS15635 e6d7eb38feea7617b014d77dedfa09ae 356 Gene3D G3DSA:3.40.50.1820 25 347 9.0E-16 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS15635 e6d7eb38feea7617b014d77dedfa09ae 356 SUPERFAMILY SSF53474 282 346 3.83E-14 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS15635 e6d7eb38feea7617b014d77dedfa09ae 356 SUPERFAMILY SSF53474 29 184 3.83E-14 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS05795 7b8ba6b677f38942dc8cd99d71f4c96c 341 SUPERFAMILY SSF48019 214 335 8.5E-10 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CJD35_RS05795 7b8ba6b677f38942dc8cd99d71f4c96c 341 Gene3D G3DSA:1.20.272.10 221 341 5.5E-12 T 28-03-2018 CJD35_RS05795 7b8ba6b677f38942dc8cd99d71f4c96c 341 Gene3D G3DSA:3.40.50.300 1 133 2.1E-8 T 28-03-2018 CJD35_RS05795 7b8ba6b677f38942dc8cd99d71f4c96c 341 Gene3D G3DSA:1.10.8.60 138 220 2.4E-11 T 28-03-2018 CJD35_RS05795 7b8ba6b677f38942dc8cd99d71f4c96c 341 SUPERFAMILY SSF52540 18 188 1.72E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21925 a4c1adba269d22871a5d5e7349a361b0 279 Gene3D G3DSA:3.40.1440.10 189 279 2.7E-6 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS21925 a4c1adba269d22871a5d5e7349a361b0 279 SUPERFAMILY SSF82771 192 277 3.01E-6 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 SUPERFAMILY SSF49493 121 199 1.44E-17 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 SUPERFAMILY SSF49493 196 275 4.84E-19 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 Gene3D G3DSA:1.10.287.110 2 120 3.8E-27 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 Gene3D G3DSA:2.60.260.20 193 297 1.1E-23 T 28-03-2018 CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 28-03-2018 IPR018253 DnaJ domain, conserved site CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 Pfam PF01556 DnaJ C terminal domain 127 270 8.1E-32 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 SUPERFAMILY SSF46565 3 71 9.29E-26 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 Pfam PF00226 DnaJ domain 4 65 8.5E-24 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 SMART SM00271 2 60 1.2E-25 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 PRINTS PR00625 DnaJ domain signature 23 38 1.4E-19 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 PRINTS PR00625 DnaJ domain signature 5 23 1.4E-19 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 PRINTS PR00625 DnaJ domain signature 40 60 1.4E-19 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS18290 a35a3dc525304a774d4ef38854faef92 297 Gene3D G3DSA:2.60.260.20 121 192 2.1E-15 T 28-03-2018 CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 SUPERFAMILY SSF49493 121 199 1.44E-17 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 SUPERFAMILY SSF49493 196 275 4.84E-19 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 Gene3D G3DSA:1.10.287.110 2 120 3.8E-27 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 Gene3D G3DSA:2.60.260.20 193 297 1.1E-23 T 28-03-2018 CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 28-03-2018 IPR018253 DnaJ domain, conserved site CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 Pfam PF01556 DnaJ C terminal domain 127 270 8.1E-32 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 SUPERFAMILY SSF46565 3 71 9.29E-26 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 Pfam PF00226 DnaJ domain 4 65 8.5E-24 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 SMART SM00271 2 60 1.2E-25 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 PRINTS PR00625 DnaJ domain signature 23 38 1.4E-19 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 PRINTS PR00625 DnaJ domain signature 5 23 1.4E-19 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 PRINTS PR00625 DnaJ domain signature 40 60 1.4E-19 T 28-03-2018 IPR001623 DnaJ domain CJD35_RS21410 a35a3dc525304a774d4ef38854faef92 297 Gene3D G3DSA:2.60.260.20 121 192 2.1E-15 T 28-03-2018 CJD35_RS06200 5efff680cfaf393030fbda31005a8d3a 769 Gene3D G3DSA:2.170.130.10 47 161 4.3E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS06200 5efff680cfaf393030fbda31005a8d3a 769 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 151 1.2E-9 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS06200 5efff680cfaf393030fbda31005a8d3a 769 Pfam PF00593 TonB dependent receptor 430 768 6.9E-44 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS06200 5efff680cfaf393030fbda31005a8d3a 769 SUPERFAMILY SSF56935 26 769 2.62E-89 T 28-03-2018 CJD35_RS06200 5efff680cfaf393030fbda31005a8d3a 769 Gene3D G3DSA:2.40.170.20 162 769 1.3E-72 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS11650 84ff314c12b4aaee0edcd322b4996f01 280 Gene3D G3DSA:3.40.50.1820 22 260 2.2E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS11650 84ff314c12b4aaee0edcd322b4996f01 280 Pfam PF12146 Serine aminopeptidase, S33 72 178 3.2E-12 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 CJD35_RS11650 84ff314c12b4aaee0edcd322b4996f01 280 SUPERFAMILY SSF53474 24 255 4.22E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS17700 93a9329792653b2279fba843dc1cdf12 520 SUPERFAMILY SSF56801 4 514 6.02E-125 T 28-03-2018 CJD35_RS17700 93a9329792653b2279fba843dc1cdf12 520 Gene3D G3DSA:3.40.50.980 172 323 1.0E-34 T 28-03-2018 CJD35_RS17700 93a9329792653b2279fba843dc1cdf12 520 ProSitePatterns PS00455 Putative AMP-binding domain signature. 168 179 - T 28-03-2018 IPR020845 AMP-binding, conserved site CJD35_RS17700 93a9329792653b2279fba843dc1cdf12 520 Gene3D G3DSA:3.40.50.980 3 171 4.7E-27 T 28-03-2018 CJD35_RS17700 93a9329792653b2279fba843dc1cdf12 520 Pfam PF13193 AMP-binding enzyme C-terminal domain 430 502 6.4E-17 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CJD35_RS17700 93a9329792653b2279fba843dc1cdf12 520 Gene3D G3DSA:2.30.38.10 324 414 3.2E-21 T 28-03-2018 CJD35_RS17700 93a9329792653b2279fba843dc1cdf12 520 Gene3D G3DSA:3.30.300.30 416 519 3.5E-24 T 28-03-2018 CJD35_RS17700 93a9329792653b2279fba843dc1cdf12 520 Pfam PF00501 AMP-binding enzyme 14 421 6.4E-81 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CJD35_RS17735 c4a68de399fe72fa88c229171a2f8cb9 351 Pfam PF04909 Amidohydrolase 73 351 2.6E-43 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS17735 c4a68de399fe72fa88c229171a2f8cb9 351 Gene3D G3DSA:3.20.20.140 4 351 2.3E-61 T 28-03-2018 CJD35_RS17735 c4a68de399fe72fa88c229171a2f8cb9 351 SUPERFAMILY SSF51556 59 351 2.35E-78 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS11995 5bb5bfec1f6a50d7d6676898cdb38720 289 Gene3D G3DSA:3.40.50.1820 1 286 1.6E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS11995 5bb5bfec1f6a50d7d6676898cdb38720 289 Pfam PF12697 Alpha/beta hydrolase family 32 278 3.4E-19 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS11995 5bb5bfec1f6a50d7d6676898cdb38720 289 SUPERFAMILY SSF53474 8 278 4.27E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS06085 ce5b984efd05e2e6d1435e8df98e0f1c 268 SUPERFAMILY SSF51735 4 261 9.47E-25 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06085 ce5b984efd05e2e6d1435e8df98e0f1c 268 Gene3D G3DSA:3.40.50.720 3 146 2.1E-6 T 28-03-2018 CJD35_RS06085 ce5b984efd05e2e6d1435e8df98e0f1c 268 Gene3D G3DSA:3.90.25.10 147 263 1.4E-13 T 28-03-2018 CJD35_RS00565 0697201054758eec7cd03cd4a030b222 227 Gene3D G3DSA:3.40.50.300 36 226 1.9E-46 T 28-03-2018 CJD35_RS00565 0697201054758eec7cd03cd4a030b222 227 Pfam PF00005 ABC transporter 42 179 1.8E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS00565 0697201054758eec7cd03cd4a030b222 227 SMART SM00382 43 225 8.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS00565 0697201054758eec7cd03cd4a030b222 227 SUPERFAMILY SSF52540 38 225 5.33E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS12765 95c3a2cd6836873ad253cf73e18402e6 643 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 25 643 33.952 T 28-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup CJD35_RS12765 95c3a2cd6836873ad253cf73e18402e6 643 Pfam PF02705 K+ potassium transporter 34 565 8.6E-208 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CJD35_RS15110 ddef05bb6f6eee354881251514709046 276 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 34 274 3.1E-61 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CJD35_RS15110 ddef05bb6f6eee354881251514709046 276 Gene3D G3DSA:3.40.50.150 1 275 9.1E-72 T 28-03-2018 CJD35_RS15110 ddef05bb6f6eee354881251514709046 276 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 1 262 36.387 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CJD35_RS15110 ddef05bb6f6eee354881251514709046 276 SUPERFAMILY SSF53335 8 268 1.01E-75 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS05530 e5a9500e6c41e0c27c769997d9fd1839 1489 Gene3D G3DSA:3.40.50.150 445 1083 1.2E-38 T 28-03-2018 CJD35_RS05530 e5a9500e6c41e0c27c769997d9fd1839 1489 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 487 501 7.3E-18 T 28-03-2018 CJD35_RS05530 e5a9500e6c41e0c27c769997d9fd1839 1489 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 749 761 7.3E-18 T 28-03-2018 CJD35_RS05530 e5a9500e6c41e0c27c769997d9fd1839 1489 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 447 463 7.3E-18 T 28-03-2018 CJD35_RS05530 e5a9500e6c41e0c27c769997d9fd1839 1489 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 832 856 7.3E-18 T 28-03-2018 CJD35_RS05530 e5a9500e6c41e0c27c769997d9fd1839 1489 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 752 758 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJD35_RS05530 e5a9500e6c41e0c27c769997d9fd1839 1489 Pfam PF02384 N-6 DNA Methylase 441 557 3.5E-6 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CJD35_RS05530 e5a9500e6c41e0c27c769997d9fd1839 1489 SUPERFAMILY SSF53335 747 767 9.65E-60 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS05530 e5a9500e6c41e0c27c769997d9fd1839 1489 SUPERFAMILY SSF53335 821 953 9.65E-60 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS05530 e5a9500e6c41e0c27c769997d9fd1839 1489 SUPERFAMILY SSF53335 275 578 9.65E-60 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 Gene3D G3DSA:1.20.5.420 85 138 7.5E-22 T 28-03-2018 CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 PIRSF PIRSF002560 1 157 1.1E-68 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 PRINTS PR00601 Bacterioferritin signature 3 22 4.9E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 PRINTS PR00601 Bacterioferritin signature 23 43 4.9E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 PRINTS PR00601 Bacterioferritin signature 65 85 4.9E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 PRINTS PR00601 Bacterioferritin signature 107 127 4.9E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 PRINTS PR00601 Bacterioferritin signature 128 149 4.9E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 PRINTS PR00601 Bacterioferritin signature 44 64 4.9E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 PRINTS PR00601 Bacterioferritin signature 86 106 4.9E-67 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 SUPERFAMILY SSF47240 1 153 8.33E-53 T 28-03-2018 IPR009078 Ferritin-like superfamily CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 Gene3D G3DSA:1.20.1260.10 1 78 3.5E-17 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 Pfam PF00210 Ferritin-like domain 8 144 1.3E-38 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CJD35_RS01415 420857442a4f07af044ce268a7e795c6 159 TIGRFAM TIGR00754 bfr: bacterioferritin 1 153 1.8E-70 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CJD35_RS13450 99f0f7b8af1fb567d6245310119fa007 392 Pfam PF13692 Glycosyl transferases group 1 207 338 4.2E-24 T 28-03-2018 CJD35_RS13450 99f0f7b8af1fb567d6245310119fa007 392 Gene3D G3DSA:3.40.50.2000 1 192 8.7E-16 T 28-03-2018 CJD35_RS13450 99f0f7b8af1fb567d6245310119fa007 392 Pfam PF13439 Glycosyltransferase Family 4 21 185 6.6E-28 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS13450 99f0f7b8af1fb567d6245310119fa007 392 SUPERFAMILY SSF53756 7 379 3.77E-70 T 28-03-2018 CJD35_RS13450 99f0f7b8af1fb567d6245310119fa007 392 Gene3D G3DSA:3.40.50.2000 193 359 4.5E-35 T 28-03-2018 CJD35_RS12435 b278e75071d72655418cc878403d3ef8 220 Gene3D G3DSA:2.40.160.20 24 220 9.2E-25 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS12435 b278e75071d72655418cc878403d3ef8 220 SUPERFAMILY SSF56925 28 220 4.97E-25 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS12435 b278e75071d72655418cc878403d3ef8 220 Pfam PF03922 OmpW family 25 220 9.9E-57 T 28-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CJD35_RS13005 7290ddfeda876204fe3e54fc5bfe8d5f 192 Pfam PF07879 PHB/PHA accumulation regulator DNA-binding domain 14 73 4.3E-30 T 28-03-2018 IPR012909 PHA accumulation regulator DNA-binding, N-terminal CJD35_RS13005 7290ddfeda876204fe3e54fc5bfe8d5f 192 Pfam PF05233 PHB accumulation regulatory domain 78 117 1.8E-18 T 28-03-2018 IPR007897 PHB accumulation regulatory CJD35_RS13005 7290ddfeda876204fe3e54fc5bfe8d5f 192 TIGRFAM TIGR01848 PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR 13 118 1.8E-46 T 28-03-2018 IPR010134 Polyhydroxyalkanoate synthesis repressor PhaR GO:0006355 CJD35_RS01500 9716d3b82d6babbd13f8c70f2b6f33d2 386 Gene3D G3DSA:1.10.1740.10 300 384 8.0E-31 T 28-03-2018 CJD35_RS01500 9716d3b82d6babbd13f8c70f2b6f33d2 386 SUPERFAMILY SSF55347 124 262 8.83E-59 T 28-03-2018 CJD35_RS01500 9716d3b82d6babbd13f8c70f2b6f33d2 386 PIRSF PIRSF006205 2 385 4.9E-146 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CJD35_RS01500 9716d3b82d6babbd13f8c70f2b6f33d2 386 SUPERFAMILY SSF69055 290 383 1.44E-31 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CJD35_RS01500 9716d3b82d6babbd13f8c70f2b6f33d2 386 SUPERFAMILY SSF51735 3 148 8.97E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS01500 9716d3b82d6babbd13f8c70f2b6f33d2 386 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 5 130 1.3E-36 T 28-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CJD35_RS01500 9716d3b82d6babbd13f8c70f2b6f33d2 386 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 5 380 44.943 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CJD35_RS01500 9716d3b82d6babbd13f8c70f2b6f33d2 386 Gene3D G3DSA:3.40.50.720 2 148 2.1E-40 T 28-03-2018 CJD35_RS01500 9716d3b82d6babbd13f8c70f2b6f33d2 386 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 3 377 9.2E-137 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CJD35_RS01500 9716d3b82d6babbd13f8c70f2b6f33d2 386 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 227 2.5E-39 T 28-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CJD35_RS01500 9716d3b82d6babbd13f8c70f2b6f33d2 386 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 375 1.5E-42 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CJD35_RS02220 3123e333f006a9942a3b06bc44d64f79 205 SUPERFAMILY SSF48150 35 200 1.38E-39 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CJD35_RS02220 3123e333f006a9942a3b06bc44d64f79 205 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 46 187 2.9E-14 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CJD35_RS02220 3123e333f006a9942a3b06bc44d64f79 205 Gene3D G3DSA:1.10.340.30 31 148 9.8E-24 T 28-03-2018 CJD35_RS02220 3123e333f006a9942a3b06bc44d64f79 205 SMART SM00478 49 204 9.0E-6 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CJD35_RS02220 3123e333f006a9942a3b06bc44d64f79 205 Gene3D G3DSA:1.10.1670.10 150 204 4.1E-12 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CJD35_RS01295 73f9a35136ca19d502bdc66298b56af6 650 Gene3D G3DSA:3.10.50.40 390 500 0.0013 T 28-03-2018 CJD35_RS01295 73f9a35136ca19d502bdc66298b56af6 650 Gene3D G3DSA:3.10.50.40 225 387 2.0E-16 T 28-03-2018 CJD35_RS01295 73f9a35136ca19d502bdc66298b56af6 650 Gene3D G3DSA:3.10.50.40 501 613 6.5E-5 T 28-03-2018 CJD35_RS01295 73f9a35136ca19d502bdc66298b56af6 650 Pfam PF13624 SurA N-terminal domain 1 171 1.8E-31 T 28-03-2018 CJD35_RS01295 73f9a35136ca19d502bdc66298b56af6 650 SUPERFAMILY SSF109998 47 174 1.02E-18 T 28-03-2018 IPR027304 Trigger factor/SurA domain CJD35_RS01295 73f9a35136ca19d502bdc66298b56af6 650 SUPERFAMILY SSF109998 208 251 1.02E-18 T 28-03-2018 IPR027304 Trigger factor/SurA domain CJD35_RS01295 73f9a35136ca19d502bdc66298b56af6 650 Pfam PF13145 PPIC-type PPIASE domain 254 374 1.0E-21 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CJD35_RS01295 73f9a35136ca19d502bdc66298b56af6 650 Gene3D G3DSA:1.10.4030.10 44 174 7.8E-12 T 28-03-2018 CJD35_RS01295 73f9a35136ca19d502bdc66298b56af6 650 SUPERFAMILY SSF54534 229 360 1.96E-8 T 28-03-2018 CJD35_RS00915 d61d95e8c3a1bbe846d4d024747b5df6 137 Pfam PF11233 Protein of unknown function (DUF3035) 26 118 2.3E-15 T 28-03-2018 IPR021395 Protein of unknown function DUF3035 CJD35_RS17355 6e7f9f77d5730b33f175ac93a4505518 391 SUPERFAMILY SSF53756 2 381 7.68E-46 T 28-03-2018 CJD35_RS17355 6e7f9f77d5730b33f175ac93a4505518 391 Gene3D G3DSA:3.40.50.2000 190 367 8.5E-26 T 28-03-2018 CJD35_RS17355 6e7f9f77d5730b33f175ac93a4505518 391 Pfam PF00534 Glycosyl transferases group 1 209 352 4.8E-12 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS17355 6e7f9f77d5730b33f175ac93a4505518 391 Pfam PF13439 Glycosyltransferase Family 4 15 172 7.6E-12 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS11225 8a6d5766408cc8879536cbe4d4d5196f 413 Pfam PF08421 Putative zinc binding domain 5 64 7.7E-16 T 28-03-2018 IPR013630 Methyltransferase putative zinc binding domain CJD35_RS11225 8a6d5766408cc8879536cbe4d4d5196f 413 SUPERFAMILY SSF53335 69 255 6.82E-24 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS11225 8a6d5766408cc8879536cbe4d4d5196f 413 Pfam PF13489 Methyltransferase domain 97 240 3.9E-15 T 28-03-2018 CJD35_RS11225 8a6d5766408cc8879536cbe4d4d5196f 413 Gene3D G3DSA:3.40.50.150 58 259 1.6E-27 T 28-03-2018 CJD35_RS11225 8a6d5766408cc8879536cbe4d4d5196f 413 Pfam PF08484 C-methyltransferase C-terminal domain 247 408 2.1E-60 T 28-03-2018 IPR013691 C-methyltransferase CJD35_RS05755 f900be82f7d81118951832b3058a0a48 931 Pfam PF00593 TonB dependent receptor 359 928 9.5E-39 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS05755 f900be82f7d81118951832b3058a0a48 931 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 159 1.5E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS05755 f900be82f7d81118951832b3058a0a48 931 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 914 931 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CJD35_RS05755 f900be82f7d81118951832b3058a0a48 931 Gene3D G3DSA:2.40.170.20 170 931 1.6E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS05755 f900be82f7d81118951832b3058a0a48 931 SUPERFAMILY SSF56935 497 553 6.96E-109 T 28-03-2018 CJD35_RS05755 f900be82f7d81118951832b3058a0a48 931 SUPERFAMILY SSF56935 31 412 6.96E-109 T 28-03-2018 CJD35_RS05755 f900be82f7d81118951832b3058a0a48 931 SUPERFAMILY SSF56935 602 931 6.96E-109 T 28-03-2018 CJD35_RS05755 f900be82f7d81118951832b3058a0a48 931 Gene3D G3DSA:2.170.130.10 29 169 1.2E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS16025 df8a31631ce108d590f52650721e3551 350 Pfam PF10686 Protein of unknown function (DUF2493) 203 259 7.0E-19 T 28-03-2018 IPR019627 Mycobacteriophage D29, Gp61 CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 409 521 1.6E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 460 2.3E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 520 2.3E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 481 499 2.3E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 474 2.3E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 Gene3D G3DSA:3.30.565.10 326 522 3.7E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 SMART SM00388 297 362 4.5E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 Pfam PF00672 HAMP domain 241 293 2.0E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 SUPERFAMILY SSF47384 280 361 5.49E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 SUPERFAMILY SSF55874 352 523 1.57E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 Pfam PF13755 Sensor N-terminal transmembrane domain 25 71 1.7E-7 T 28-03-2018 IPR025908 Sensor N-terminal transmembrane domain CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 Gene3D G3DSA:3.30.450.20 74 325 6.2E-6 T 28-03-2018 CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 Pfam PF00512 His Kinase A (phospho-acceptor) domain 300 361 5.0E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 SMART SM00387 409 523 1.1E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 SMART SM00304 241 296 1.7E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CJD35_RS07820 85ae13953f53c06e176a9713acdaa1bc 532 SUPERFAMILY SSF158472 241 295 9.29E-6 T 28-03-2018 CJD35_RS01465 05c54ac638d1efda8afdb45ca87ed521 368 Gene3D G3DSA:3.40.50.1970 8 173 5.4E-50 T 28-03-2018 CJD35_RS01465 05c54ac638d1efda8afdb45ca87ed521 368 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 359 9.0E-107 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CJD35_RS01465 05c54ac638d1efda8afdb45ca87ed521 368 Pfam PF01761 3-dehydroquinate synthase 68 331 6.6E-97 T 28-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CJD35_RS01465 05c54ac638d1efda8afdb45ca87ed521 368 Gene3D G3DSA:1.20.1090.10 174 367 1.3E-57 T 28-03-2018 CJD35_RS01465 05c54ac638d1efda8afdb45ca87ed521 368 SUPERFAMILY SSF56796 5 362 3.93E-106 T 28-03-2018 CJD35_RS01465 05c54ac638d1efda8afdb45ca87ed521 368 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 364 39.123 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CJD35_RS01465 05c54ac638d1efda8afdb45ca87ed521 368 PIRSF PIRSF001455 4 366 1.7E-100 T 28-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CJD35_RS06380 a2964fc0056da65e6c29fc39c53c6fa5 308 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 220 288 5.9E-8 T 28-03-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal CJD35_RS06380 a2964fc0056da65e6c29fc39c53c6fa5 308 Gene3D G3DSA:2.40.50.140 223 297 1.6E-11 T 28-03-2018 CJD35_RS06380 a2964fc0056da65e6c29fc39c53c6fa5 308 Gene3D G3DSA:2.40.50.140 74 133 2.1E-5 T 28-03-2018 CJD35_RS06380 a2964fc0056da65e6c29fc39c53c6fa5 308 SUPERFAMILY SSF50249 157 291 5.14E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS06380 a2964fc0056da65e6c29fc39c53c6fa5 308 SUPERFAMILY SSF50249 15 126 3.26E-8 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS05280 e18d1e4aa8769aa6ba2340ad22542ed9 111 Pfam PF04956 TrbC/VIRB2 family 8 100 3.3E-25 T 28-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CJD35_RS04230 4d175e1b56ec2b35c6145f89dc3719ae 275 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 14 275 50.025 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CJD35_RS04230 4d175e1b56ec2b35c6145f89dc3719ae 275 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 19 274 7.1E-119 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CJD35_RS04230 4d175e1b56ec2b35c6145f89dc3719ae 275 Gene3D G3DSA:3.20.20.70 18 275 4.6E-72 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS04230 4d175e1b56ec2b35c6145f89dc3719ae 275 Pfam PF00793 DAHP synthetase I family 10 257 5.2E-70 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CJD35_RS04230 4d175e1b56ec2b35c6145f89dc3719ae 275 SUPERFAMILY SSF51569 5 274 1.19E-103 T 28-03-2018 CJD35_RS20605 556e7880516b969a029bf46ea947d9c9 195 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 192 4.4E-49 T 28-03-2018 CJD35_RS20605 556e7880516b969a029bf46ea947d9c9 195 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 104 123 1.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20605 556e7880516b969a029bf46ea947d9c9 195 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 177 1.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20605 556e7880516b969a029bf46ea947d9c9 195 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 93 1.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20605 556e7880516b969a029bf46ea947d9c9 195 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 32 43 1.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20605 556e7880516b969a029bf46ea947d9c9 195 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 142 1.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20605 556e7880516b969a029bf46ea947d9c9 195 SUPERFAMILY SSF51735 6 193 8.13E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS20605 556e7880516b969a029bf46ea947d9c9 195 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 104 123 3.8E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20605 556e7880516b969a029bf46ea947d9c9 195 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 32 43 3.8E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20605 556e7880516b969a029bf46ea947d9c9 195 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 91 3.8E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS20605 556e7880516b969a029bf46ea947d9c9 195 Gene3D G3DSA:3.40.50.720 4 195 2.6E-58 T 28-03-2018 CJD35_RS06535 cf2b21211f31db5bad72ce027026a295 136 Gene3D G3DSA:3.40.50.1820 8 127 6.2E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS06535 cf2b21211f31db5bad72ce027026a295 136 Pfam PF06441 Epoxide hydrolase N terminus 20 114 1.3E-23 T 28-03-2018 IPR010497 Epoxide hydrolase, N-terminal KEGG: 00980+3.3.2.9|Reactome: R-HSA-211945 CJD35_RS06535 cf2b21211f31db5bad72ce027026a295 136 SUPERFAMILY SSF53474 12 124 1.08E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS09670 83b249d0629b6144c39733690e67ef53 819 Gene3D G3DSA:2.170.130.10 33 174 1.5E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS09670 83b249d0629b6144c39733690e67ef53 819 Pfam PF07715 TonB-dependent Receptor Plug Domain 57 165 3.9E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS09670 83b249d0629b6144c39733690e67ef53 819 SUPERFAMILY SSF56935 513 661 1.39E-114 T 28-03-2018 CJD35_RS09670 83b249d0629b6144c39733690e67ef53 819 SUPERFAMILY SSF56935 34 479 1.39E-114 T 28-03-2018 CJD35_RS09670 83b249d0629b6144c39733690e67ef53 819 SUPERFAMILY SSF56935 698 819 1.39E-114 T 28-03-2018 CJD35_RS09670 83b249d0629b6144c39733690e67ef53 819 Gene3D G3DSA:2.40.170.20 175 819 8.0E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS09670 83b249d0629b6144c39733690e67ef53 819 Pfam PF00593 TonB dependent receptor 282 817 1.5E-40 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS08155 2ea9f9ff1ed5a3c9ccedaaae1362781e 186 Pfam PF03968 OstA-like protein 43 152 3.8E-18 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CJD35_RS08155 2ea9f9ff1ed5a3c9ccedaaae1362781e 186 Gene3D G3DSA:2.60.450.10 31 176 1.8E-29 T 28-03-2018 CJD35_RS21685 00102c7a98195a0677ac37b4ad04cd79 134 Gene3D G3DSA:3.40.1800.10 14 127 2.0E-7 T 28-03-2018 CJD35_RS21685 00102c7a98195a0677ac37b4ad04cd79 134 SUPERFAMILY SSF48695 90 110 1.55E-5 T 28-03-2018 IPR011031 Multihaem cytochrome CJD35_RS21685 00102c7a98195a0677ac37b4ad04cd79 134 SUPERFAMILY SSF48695 26 47 1.55E-5 T 28-03-2018 IPR011031 Multihaem cytochrome CJD35_RS00730 f4eae410fb65ddb4c6d2753f7ffc12e4 201 Pfam PF04542 Sigma-70 region 2 21 79 1.8E-9 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00730 f4eae410fb65ddb4c6d2753f7ffc12e4 201 SUPERFAMILY SSF88946 10 89 3.26E-10 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00730 f4eae410fb65ddb4c6d2753f7ffc12e4 201 Gene3D G3DSA:1.10.10.10 93 188 3.7E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS00730 f4eae410fb65ddb4c6d2753f7ffc12e4 201 Gene3D G3DSA:1.10.1740.10 5 81 4.0E-10 T 28-03-2018 CJD35_RS00730 f4eae410fb65ddb4c6d2753f7ffc12e4 201 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 159 1.4E-18 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00730 f4eae410fb65ddb4c6d2753f7ffc12e4 201 SUPERFAMILY SSF88659 102 163 5.01E-12 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS00730 f4eae410fb65ddb4c6d2753f7ffc12e4 201 Pfam PF08281 Sigma-70, region 4 109 158 9.5E-13 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS01720 310559808caf1b3a5a3a5905eeb923d3 289 SUPERFAMILY SSF143631 1 288 1.44E-81 T 28-03-2018 IPR003374 ApbE-like domain CJD35_RS01720 310559808caf1b3a5a3a5905eeb923d3 289 Gene3D G3DSA:3.10.520.10 4 283 3.1E-50 T 28-03-2018 CJD35_RS01720 310559808caf1b3a5a3a5905eeb923d3 289 PIRSF PIRSF006268 1 287 2.6E-67 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CJD35_RS01720 310559808caf1b3a5a3a5905eeb923d3 289 Pfam PF02424 ApbE family 1 262 1.3E-68 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CJD35_RS07695 700dfcec642ed61e5b2216abf6f55eb4 392 Gene3D G3DSA:2.40.50.100 74 143 2.8E-12 T 28-03-2018 CJD35_RS07695 700dfcec642ed61e5b2216abf6f55eb4 392 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 34 387 4.6E-120 T 28-03-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 CJD35_RS07695 700dfcec642ed61e5b2216abf6f55eb4 392 Gene3D G3DSA:1.10.287.470 151 210 3.2E-13 T 28-03-2018 CJD35_RS07695 700dfcec642ed61e5b2216abf6f55eb4 392 SUPERFAMILY SSF111369 73 169 1.05E-10 T 28-03-2018 CJD35_RS07695 700dfcec642ed61e5b2216abf6f55eb4 392 SUPERFAMILY SSF111369 206 313 4.18E-13 T 28-03-2018 CJD35_RS07695 700dfcec642ed61e5b2216abf6f55eb4 392 Gene3D G3DSA:2.40.50.100 253 364 1.9E-10 T 28-03-2018 CJD35_RS07695 700dfcec642ed61e5b2216abf6f55eb4 392 Pfam PF13437 HlyD family secretion protein 259 371 5.6E-16 T 28-03-2018 CJD35_RS07695 700dfcec642ed61e5b2216abf6f55eb4 392 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 377 392 1.4E-5 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CJD35_RS07695 700dfcec642ed61e5b2216abf6f55eb4 392 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 271 292 1.4E-5 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CJD35_RS07695 700dfcec642ed61e5b2216abf6f55eb4 392 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 86 106 1.4E-5 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CJD35_RS07695 700dfcec642ed61e5b2216abf6f55eb4 392 Pfam PF13533 Biotin-lipoyl like 76 123 1.1E-11 T 28-03-2018 CJD35_RS12295 07086f2bb6cc7140b2078e37c54207af 183 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 174 1.4E-38 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CJD35_RS12295 07086f2bb6cc7140b2078e37c54207af 183 Gene3D G3DSA:3.40.50.150 1 179 1.6E-24 T 28-03-2018 CJD35_RS12295 07086f2bb6cc7140b2078e37c54207af 183 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJD35_RS12295 07086f2bb6cc7140b2078e37c54207af 183 Pfam PF03602 Conserved hypothetical protein 95 1 174 3.9E-43 T 28-03-2018 CJD35_RS12295 07086f2bb6cc7140b2078e37c54207af 183 PIRSF PIRSF004553 1 179 5.6E-46 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CJD35_RS12295 07086f2bb6cc7140b2078e37c54207af 183 SUPERFAMILY SSF53335 1 175 9.97E-37 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS08090 5c69c4c6556f88797059a0617b691288 412 SUPERFAMILY SSF56024 184 375 1.3E-27 T 28-03-2018 CJD35_RS08090 5c69c4c6556f88797059a0617b691288 412 SUPERFAMILY SSF56024 28 195 4.08E-38 T 28-03-2018 CJD35_RS08090 5c69c4c6556f88797059a0617b691288 412 SMART SM00155 129 156 7.1E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CJD35_RS08090 5c69c4c6556f88797059a0617b691288 412 SMART SM00155 309 335 1.7E-7 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CJD35_RS08090 5c69c4c6556f88797059a0617b691288 412 Gene3D G3DSA:3.30.870.10 15 199 8.9E-27 T 28-03-2018 CJD35_RS08090 5c69c4c6556f88797059a0617b691288 412 Gene3D G3DSA:3.30.870.10 233 383 2.4E-18 T 28-03-2018 CJD35_RS08090 5c69c4c6556f88797059a0617b691288 412 Pfam PF13091 PLD-like domain 50 188 1.2E-12 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CJD35_RS08090 5c69c4c6556f88797059a0617b691288 412 Pfam PF13091 PLD-like domain 241 361 2.9E-17 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CJD35_RS10215 957645fa35d702d1c449c7014050d9e3 261 Pfam PF12804 MobA-like NTP transferase domain 26 166 2.9E-14 T 28-03-2018 IPR025877 MobA-like NTP transferase CJD35_RS10215 957645fa35d702d1c449c7014050d9e3 261 Gene3D G3DSA:3.90.550.10 4 252 9.2E-26 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS10215 957645fa35d702d1c449c7014050d9e3 261 SUPERFAMILY SSF53448 4 249 6.34E-30 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS03485 9daa51e1eb031ff9b91c2a9842ee33e7 137 SUPERFAMILY SSF46458 7 128 1.62E-21 T 28-03-2018 IPR009050 Globin-like CJD35_RS03485 9daa51e1eb031ff9b91c2a9842ee33e7 137 Gene3D G3DSA:1.10.490.10 1 132 7.2E-22 T 28-03-2018 CJD35_RS03485 9daa51e1eb031ff9b91c2a9842ee33e7 137 Pfam PF01152 Bacterial-like globin 10 106 2.8E-18 T 28-03-2018 IPR001486 Truncated hemoglobin GO:0019825 CJD35_RS14315 186b163cde9ab68dc1b3a401aa871699 223 Gene3D G3DSA:1.10.10.10 1 68 2.8E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS14315 186b163cde9ab68dc1b3a401aa871699 223 SUPERFAMILY SSF46785 2 68 9.29E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS14315 186b163cde9ab68dc1b3a401aa871699 223 SUPERFAMILY SSF51306 99 220 1.13E-29 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS14315 186b163cde9ab68dc1b3a401aa871699 223 Hamap MF_00015 LexA repressor [lexA]. 1 222 33.079 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CJD35_RS14315 186b163cde9ab68dc1b3a401aa871699 223 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 175 187 2.7E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CJD35_RS14315 186b163cde9ab68dc1b3a401aa871699 223 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 135 145 2.7E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CJD35_RS14315 186b163cde9ab68dc1b3a401aa871699 223 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 146 157 2.7E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CJD35_RS14315 186b163cde9ab68dc1b3a401aa871699 223 Gene3D G3DSA:2.10.109.10 105 222 2.5E-20 T 28-03-2018 CJD35_RS14315 186b163cde9ab68dc1b3a401aa871699 223 TIGRFAM TIGR00498 lexA: repressor LexA 2 222 6.8E-51 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CJD35_RS14315 186b163cde9ab68dc1b3a401aa871699 223 Pfam PF01726 LexA DNA binding domain 2 63 7.2E-15 T 28-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CJD35_RS14315 186b163cde9ab68dc1b3a401aa871699 223 Pfam PF00717 Peptidase S24-like 138 204 2.9E-12 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS07050 13cd2d6dd7de340e771cdc848409ad80 217 SUPERFAMILY SSF47616 93 199 6.68E-14 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS07050 13cd2d6dd7de340e771cdc848409ad80 217 Gene3D G3DSA:1.20.1050.10 77 181 5.7E-10 T 28-03-2018 CJD35_RS07050 13cd2d6dd7de340e771cdc848409ad80 217 SUPERFAMILY SSF52833 6 88 1.44E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS07050 13cd2d6dd7de340e771cdc848409ad80 217 Gene3D G3DSA:3.40.30.10 6 76 1.5E-13 T 28-03-2018 CJD35_RS07050 13cd2d6dd7de340e771cdc848409ad80 217 Pfam PF13417 Glutathione S-transferase, N-terminal domain 7 79 3.5E-15 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS16450 8768587389dc5415c4bdaf4e6ee3e6dd 472 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 241 248 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS16450 8768587389dc5415c4bdaf4e6ee3e6dd 472 Pfam PF00171 Aldehyde dehydrogenase family 19 462 4.7E-151 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS16450 8768587389dc5415c4bdaf4e6ee3e6dd 472 SUPERFAMILY SSF53720 3 463 3.27E-149 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS16450 8768587389dc5415c4bdaf4e6ee3e6dd 472 Gene3D G3DSA:3.40.605.10 1 260 7.6E-90 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS16450 8768587389dc5415c4bdaf4e6ee3e6dd 472 Gene3D G3DSA:3.40.309.10 261 450 2.9E-68 T 28-03-2018 CJD35_RS12050 440268d250f0ffeb240f5bdcce37939c 450 Gene3D G3DSA:1.25.40.10 138 195 0.0014 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS12050 440268d250f0ffeb240f5bdcce37939c 450 Pfam PF05036 Sporulation related domain 349 427 3.2E-10 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS12050 440268d250f0ffeb240f5bdcce37939c 450 Gene3D G3DSA:3.30.70.1070 346 429 4.5E-11 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS12050 440268d250f0ffeb240f5bdcce37939c 450 SUPERFAMILY SSF48452 42 193 4.22E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS12050 440268d250f0ffeb240f5bdcce37939c 450 SUPERFAMILY SSF110997 350 426 3.66E-5 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS12050 440268d250f0ffeb240f5bdcce37939c 450 Gene3D G3DSA:1.25.40.10 29 137 2.6E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS10255 cdcaa598fd484bee3b62bc233a76d813 74 Pfam PF06906 Protein of unknown function (DUF1272) 1 56 4.5E-26 T 28-03-2018 IPR010696 Protein of unknown function DUF1272 CJD35_RS11560 2e625da7667f8e6a014bcb135c9597eb 246 SUPERFAMILY SSF51306 155 244 2.88E-13 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS11560 2e625da7667f8e6a014bcb135c9597eb 246 Pfam PF00717 Peptidase S24-like 164 222 7.3E-5 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS11560 2e625da7667f8e6a014bcb135c9597eb 246 Gene3D G3DSA:2.10.109.10 121 246 2.8E-15 T 28-03-2018 CJD35_RS11560 2e625da7667f8e6a014bcb135c9597eb 246 ProSitePatterns PS00501 Signal peptidases I serine active site. 164 171 - T 28-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CJD35_RS10715 ce823f641aecf1df51deb1730c124e85 305 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 27 285 3.5E-25 T 28-03-2018 IPR017039 Virulence factor BrkB CJD35_RS10715 ce823f641aecf1df51deb1730c124e85 305 Pfam PF03631 Virulence factor BrkB 36 290 5.5E-49 T 28-03-2018 IPR017039 Virulence factor BrkB CJD35_RS10715 ce823f641aecf1df51deb1730c124e85 305 PIRSF PIRSF035875 9 305 1.4E-56 T 28-03-2018 IPR017039 Virulence factor BrkB CJD35_RS09055 a0bc1a837d092ad8d27aac18a3d2b687 146 PRINTS PR00332 Histidine triad family signature 101 111 6.0E-13 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CJD35_RS09055 a0bc1a837d092ad8d27aac18a3d2b687 146 PRINTS PR00332 Histidine triad family signature 12 28 6.0E-13 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CJD35_RS09055 a0bc1a837d092ad8d27aac18a3d2b687 146 PRINTS PR00332 Histidine triad family signature 33 51 6.0E-13 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CJD35_RS09055 a0bc1a837d092ad8d27aac18a3d2b687 146 Gene3D G3DSA:3.30.428.10 4 146 2.6E-32 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CJD35_RS09055 a0bc1a837d092ad8d27aac18a3d2b687 146 SUPERFAMILY SSF54197 7 146 2.01E-34 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CJD35_RS09055 a0bc1a837d092ad8d27aac18a3d2b687 146 Pfam PF01230 HIT domain 20 113 3.5E-24 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CJD35_RS18610 2c2eb0ac3955b7a16543a104d875d63e 217 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 17 209 3.2E-62 T 28-03-2018 IPR014114 Type-F conjugative transfer system protein TraW CJD35_RS21880 1b6b150f11a9420429a649279eed0e5a 209 Pfam PF07996 Type IV secretion system proteins 2 190 3.2E-22 T 28-03-2018 IPR014158 Type IV secretion system, VirB5 CJD35_RS21880 1b6b150f11a9420429a649279eed0e5a 209 Gene3D G3DSA:1.20.58.430 1 196 2.7E-23 T 28-03-2018 CJD35_RS21880 1b6b150f11a9420429a649279eed0e5a 209 SUPERFAMILY SSF101082 2 189 6.93E-21 T 28-03-2018 IPR023220 Type IV secretion system, VirB5-domain CJD35_RS13970 8e841e82a0177b2fd37b5558cfa2b1fb 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 1 48 1.4E-15 T 28-03-2018 IPR008621 Cbb3-type cytochrome oxidase component CJD35_RS11935 b95670cf8f2647786ad9410dd75b2477 193 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 50 184 2.2E-34 T 28-03-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 CJD35_RS11935 b95670cf8f2647786ad9410dd75b2477 193 Gene3D G3DSA:3.40.140.10 39 186 1.5E-39 T 28-03-2018 CJD35_RS11935 b95670cf8f2647786ad9410dd75b2477 193 SUPERFAMILY SSF53927 46 185 1.18E-36 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CJD35_RS11935 b95670cf8f2647786ad9410dd75b2477 193 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 98 144 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CJD35_RS11935 b95670cf8f2647786ad9410dd75b2477 193 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 6 120 6.4E-12 T 28-03-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CJD35_RS06980 7e16db8e28703ddd3c083538117b1bbd 173 Pfam PF04116 Fatty acid hydroxylase superfamily 13 141 9.7E-9 T 28-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 CJD35_RS17440 376ab038d59b1c0020744f351d15060b 769 Gene3D G3DSA:3.30.365.10 445 605 2.9E-47 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17440 376ab038d59b1c0020744f351d15060b 769 TIGRFAM TIGR02965 xanthine_xdhB: xanthine dehydrogenase, molybdopterin binding subunit 15 765 0.0 T 28-03-2018 IPR014309 Xanthine dehydrogenase, molybdopterin binding subunit GO:0030151 KEGG: 00230+1.17.1.4+1.17.3.2|KEGG: 00232+1.17.3.2|KEGG: 00983+1.17.3.2|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 CJD35_RS17440 376ab038d59b1c0020744f351d15060b 769 SUPERFAMILY SSF56003 133 766 1.57E-191 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17440 376ab038d59b1c0020744f351d15060b 769 SUPERFAMILY SSF54665 15 134 5.76E-40 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS17440 376ab038d59b1c0020744f351d15060b 769 SMART SM01008 26 133 1.5E-47 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS17440 376ab038d59b1c0020744f351d15060b 769 Gene3D G3DSA:3.30.365.10 155 263 7.8E-32 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17440 376ab038d59b1c0020744f351d15060b 769 Gene3D G3DSA:3.90.1170.50 13 133 8.1E-33 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS17440 376ab038d59b1c0020744f351d15060b 769 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 154 695 6.4E-195 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17440 376ab038d59b1c0020744f351d15060b 769 Gene3D G3DSA:3.30.365.10 606 768 5.9E-61 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS17440 376ab038d59b1c0020744f351d15060b 769 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 26 133 8.9E-29 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CJD35_RS17440 376ab038d59b1c0020744f351d15060b 769 Gene3D G3DSA:3.30.365.10 264 425 4.1E-57 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CJD35_RS00930 811486dbf743c5f12747b5f8f4815a93 313 Gene3D G3DSA:2.40.30.30 180 313 2.0E-38 T 28-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 CJD35_RS00930 811486dbf743c5f12747b5f8f4815a93 313 Pfam PF01687 Riboflavin kinase 184 306 6.8E-33 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CJD35_RS00930 811486dbf743c5f12747b5f8f4815a93 313 SUPERFAMILY SSF82114 174 308 2.62E-41 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CJD35_RS00930 811486dbf743c5f12747b5f8f4815a93 313 PIRSF PIRSF004491 1 311 6.2E-88 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CJD35_RS00930 811486dbf743c5f12747b5f8f4815a93 313 Gene3D G3DSA:3.40.50.620 1 179 1.9E-39 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS00930 811486dbf743c5f12747b5f8f4815a93 313 Pfam PF06574 FAD synthetase 12 166 8.7E-44 T 28-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CJD35_RS00930 811486dbf743c5f12747b5f8f4815a93 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 306 2.3E-71 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CJD35_RS00930 811486dbf743c5f12747b5f8f4815a93 313 SMART SM00904 183 307 3.6E-58 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CJD35_RS00930 811486dbf743c5f12747b5f8f4815a93 313 SUPERFAMILY SSF52374 18 175 2.99E-27 T 28-03-2018 CJD35_RS19485 d317104bd7d8e773e331ea4fe6454246 173 Pfam PF00866 Ring hydroxylating beta subunit 24 161 3.2E-27 T 28-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CJD35_RS19485 d317104bd7d8e773e331ea4fe6454246 173 Gene3D G3DSA:3.10.450.50 9 173 2.3E-19 T 28-03-2018 CJD35_RS19485 d317104bd7d8e773e331ea4fe6454246 173 SUPERFAMILY SSF54427 16 172 1.46E-29 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS14705 cddcfa9bb5c8d648c48a487aa56545c6 156 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 19 153 21.55 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CJD35_RS14705 cddcfa9bb5c8d648c48a487aa56545c6 156 SMART SM00732 19 118 7.5E-31 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CJD35_RS14705 cddcfa9bb5c8d648c48a487aa56545c6 156 SUPERFAMILY SSF53098 19 150 2.28E-34 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS14705 cddcfa9bb5c8d648c48a487aa56545c6 156 Gene3D G3DSA:3.30.420.140 17 154 4.4E-37 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CJD35_RS14705 cddcfa9bb5c8d648c48a487aa56545c6 156 Pfam PF03652 Holliday junction resolvase 20 150 1.6E-36 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CJD35_RS14705 cddcfa9bb5c8d648c48a487aa56545c6 156 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 23 149 1.8E-28 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CJD35_RS07415 e256d8ffb30a8f0c43d64b8a29eb7ab7 330 PIRSF PIRSF033905 2 330 2.4E-156 T 28-03-2018 IPR009645 Uncharacterised conserved protein GguC CJD35_RS07415 e256d8ffb30a8f0c43d64b8a29eb7ab7 330 Gene3D G3DSA:3.90.850.10 100 320 5.3E-22 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS07415 e256d8ffb30a8f0c43d64b8a29eb7ab7 330 SUPERFAMILY SSF56529 121 308 2.98E-19 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS06675 25e0bbf2b5129f4b67a7f963cf3b6142 111 Pfam PF02699 Preprotein translocase subunit 23 96 3.5E-26 T 28-03-2018 IPR003849 Preprotein translocase YajC CJD35_RS06675 25e0bbf2b5129f4b67a7f963cf3b6142 111 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 20 101 4.0E-26 T 28-03-2018 IPR003849 Preprotein translocase YajC CJD35_RS06675 25e0bbf2b5129f4b67a7f963cf3b6142 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 1.5E-17 T 28-03-2018 IPR003849 Preprotein translocase YajC CJD35_RS06675 25e0bbf2b5129f4b67a7f963cf3b6142 111 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 1.5E-17 T 28-03-2018 IPR003849 Preprotein translocase YajC CJD35_RS06675 25e0bbf2b5129f4b67a7f963cf3b6142 111 SMART SM01323 19 101 1.7E-38 T 28-03-2018 IPR003849 Preprotein translocase YajC CJD35_RS21705 03a52a2edbdb1353d4e4f81ac73e38bf 128 SUPERFAMILY SSF46955 1 126 3.55E-36 T 28-03-2018 IPR009061 Putative DNA-binding domain CJD35_RS21705 03a52a2edbdb1353d4e4f81ac73e38bf 128 Gene3D G3DSA:1.10.1660.10 1 55 6.4E-24 T 28-03-2018 CJD35_RS21705 03a52a2edbdb1353d4e4f81ac73e38bf 128 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.1E-19 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS21705 03a52a2edbdb1353d4e4f81ac73e38bf 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 7.6E-13 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS21705 03a52a2edbdb1353d4e4f81ac73e38bf 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 7.6E-13 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS21705 03a52a2edbdb1353d4e4f81ac73e38bf 128 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 7.6E-13 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS21705 03a52a2edbdb1353d4e4f81ac73e38bf 128 SMART SM00422 1 70 5.5E-31 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS21705 03a52a2edbdb1353d4e4f81ac73e38bf 128 Gene3D G3DSA:1.10.1660.10 56 128 4.0E-19 T 28-03-2018 CJD35_RS21705 03a52a2edbdb1353d4e4f81ac73e38bf 128 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS12540 185982d9dacc6428c0495d63f40ba055 262 PRINTS PR00069 Aldo-keto reductase signature 184 208 3.3E-10 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CJD35_RS12540 185982d9dacc6428c0495d63f40ba055 262 PRINTS PR00069 Aldo-keto reductase signature 25 49 3.3E-10 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CJD35_RS12540 185982d9dacc6428c0495d63f40ba055 262 PRINTS PR00069 Aldo-keto reductase signature 81 99 3.3E-10 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CJD35_RS12540 185982d9dacc6428c0495d63f40ba055 262 Gene3D G3DSA:3.20.20.100 1 262 3.4E-75 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS12540 185982d9dacc6428c0495d63f40ba055 262 Pfam PF00248 Aldo/keto reductase family 1 248 5.9E-56 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS12540 185982d9dacc6428c0495d63f40ba055 262 SUPERFAMILY SSF51430 1 252 7.33E-76 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS15780 f35fc9463a9620a15ae9bfef70b31905 382 SUPERFAMILY SSF56112 39 331 1.43E-23 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS15780 f35fc9463a9620a15ae9bfef70b31905 382 Gene3D G3DSA:3.90.1200.10 154 343 1.4E-12 T 28-03-2018 CJD35_RS15780 f35fc9463a9620a15ae9bfef70b31905 382 Pfam PF02958 Ecdysteroid kinase 118 321 3.2E-10 T 28-03-2018 IPR004119 Protein of unknown function DUF227 CJD35_RS20560 746d2bc4f8ae525d827d6fb5b9746147 131 Gene3D G3DSA:1.10.287.910 30 83 2.7E-17 T 28-03-2018 CJD35_RS20560 746d2bc4f8ae525d827d6fb5b9746147 131 Pfam PF02411 MerT mercuric transport protein 17 131 5.3E-30 T 28-03-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 CJD35_RS04265 78e0037e8f8c01f77ba9d4cee2a05a70 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 2.1E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS04265 78e0037e8f8c01f77ba9d4cee2a05a70 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 2.1E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS04265 78e0037e8f8c01f77ba9d4cee2a05a70 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 1.1E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS04265 78e0037e8f8c01f77ba9d4cee2a05a70 204 Gene3D G3DSA:1.10.10.60 1 69 4.4E-19 T 28-03-2018 CJD35_RS04265 78e0037e8f8c01f77ba9d4cee2a05a70 204 SUPERFAMILY SSF46689 12 93 4.41E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS04265 78e0037e8f8c01f77ba9d4cee2a05a70 204 Gene3D G3DSA:1.10.357.10 70 204 1.4E-14 T 28-03-2018 CJD35_RS04265 78e0037e8f8c01f77ba9d4cee2a05a70 204 SUPERFAMILY SSF48498 104 203 5.01E-8 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS07255 b21f601808fea534ea9b5df590c5c597 142 Gene3D G3DSA:3.90.190.10 1 141 1.6E-9 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like CJD35_RS07255 b21f601808fea534ea9b5df590c5c597 142 Pfam PF04273 Putative phosphatase (DUF442) 2 109 7.9E-32 T 28-03-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CJD35_RS07255 b21f601808fea534ea9b5df590c5c597 142 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 2 134 4.0E-42 T 28-03-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CJD35_RS07255 b21f601808fea534ea9b5df590c5c597 142 SUPERFAMILY SSF52799 2 112 8.36E-6 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like CJD35_RS10485 aecb71903f9a6a9469911c371e6b2427 607 SUPERFAMILY SSF48452 30 163 3.54E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS10485 aecb71903f9a6a9469911c371e6b2427 607 Pfam PF05036 Sporulation related domain 523 587 2.9E-5 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS10485 aecb71903f9a6a9469911c371e6b2427 607 Gene3D G3DSA:1.25.40.120 21 521 5.9E-32 T 28-03-2018 CJD35_RS15040 007032e0c631d421027eb367b67cb087 395 SUPERFAMILY SSF47203 236 373 2.09E-7 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS15040 007032e0c631d421027eb367b67cb087 395 PIRSF PIRSF016578 2 393 8.5E-113 T 28-03-2018 CJD35_RS15040 007032e0c631d421027eb367b67cb087 395 Gene3D G3DSA:1.20.140.10 203 373 1.9E-11 T 28-03-2018 CJD35_RS15040 007032e0c631d421027eb367b67cb087 395 Gene3D G3DSA:1.10.540.10 1 108 3.8E-11 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15040 007032e0c631d421027eb367b67cb087 395 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 244 373 2.2E-21 T 28-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CJD35_RS15040 007032e0c631d421027eb367b67cb087 395 SUPERFAMILY SSF56645 12 212 3.4E-37 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS15040 007032e0c631d421027eb367b67cb087 395 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 25 90 4.1E-7 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS15040 007032e0c631d421027eb367b67cb087 395 Gene3D G3DSA:2.40.110.10 116 202 7.3E-19 T 28-03-2018 CJD35_RS09865 734d2a5e528a20cf35eac62a64cc348b 95 Gene3D G3DSA:1.10.10.10 42 95 5.5E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS09865 734d2a5e528a20cf35eac62a64cc348b 95 TIGRFAM TIGR04353 PqqD_rel_X: PqqD family protein, HPr-rel-A system 20 93 2.0E-17 T 28-03-2018 IPR027599 PqqD family protein, HPr-rel-A system CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 106 211 8.7E-40 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 SUPERFAMILY SSF46609 12 99 2.49E-33 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 14 98 1.2E-29 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 178 185 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 SUPERFAMILY SSF54719 103 215 1.7E-44 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 PRINTS PR01703 Manganese superoxide dismutase signature 135 143 3.9E-24 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 PRINTS PR01703 Manganese superoxide dismutase signature 81 94 3.9E-24 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 PRINTS PR01703 Manganese superoxide dismutase signature 39 52 3.9E-24 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 PRINTS PR01703 Manganese superoxide dismutase signature 176 188 3.9E-24 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 PRINTS PR01703 Manganese superoxide dismutase signature 18 29 3.9E-24 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 PIRSF PIRSF000349 2 219 4.7E-82 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS16940 264855b09d5e9f6d9f1a1a68118a512c 219 Gene3D G3DSA:1.10.287.990 32 98 1.9E-27 T 28-03-2018 CJD35_RS11530 b343208a77b3d798b7274c86fa31289a 271 SMART SM00470 18 111 0.0032 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS11530 b343208a77b3d798b7274c86fa31289a 271 SUPERFAMILY SSF110849 51 138 6.41E-10 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS11530 b343208a77b3d798b7274c86fa31289a 271 Pfam PF02195 ParB-like nuclease domain 36 104 3.2E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS11530 b343208a77b3d798b7274c86fa31289a 271 Gene3D G3DSA:3.90.1530.10 5 118 1.7E-11 T 28-03-2018 CJD35_RS15560 4a5d6b513623537df99414c2bd53cc82 400 Pfam PF02803 Thiolase, C-terminal domain 277 399 1.5E-42 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CJD35_RS15560 4a5d6b513623537df99414c2bd53cc82 400 Pfam PF00108 Thiolase, N-terminal domain 5 225 5.0E-42 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CJD35_RS15560 4a5d6b513623537df99414c2bd53cc82 400 Gene3D G3DSA:3.40.47.10 279 399 1.2E-26 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS15560 4a5d6b513623537df99414c2bd53cc82 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 398 6.0E-118 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS15560 4a5d6b513623537df99414c2bd53cc82 400 SUPERFAMILY SSF53901 3 277 3.1E-57 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS15560 4a5d6b513623537df99414c2bd53cc82 400 PIRSF PIRSF000429 1 400 5.2E-101 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS15560 4a5d6b513623537df99414c2bd53cc82 400 Gene3D G3DSA:3.40.47.10 1 278 3.9E-37 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS15560 4a5d6b513623537df99414c2bd53cc82 400 SUPERFAMILY SSF53901 278 399 6.19E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS15560 4a5d6b513623537df99414c2bd53cc82 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CJD35_RS15560 4a5d6b513623537df99414c2bd53cc82 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CJD35_RS17730 956d803c86057250fe70d95646c29df0 534 Gene3D G3DSA:1.20.1250.20 8 211 3.0E-26 T 28-03-2018 CJD35_RS17730 956d803c86057250fe70d95646c29df0 534 Gene3D G3DSA:1.20.1250.20 314 522 4.2E-19 T 28-03-2018 CJD35_RS17730 956d803c86057250fe70d95646c29df0 534 SUPERFAMILY SSF103473 6 211 7.32E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS17730 956d803c86057250fe70d95646c29df0 534 SUPERFAMILY SSF103473 310 511 7.32E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS17730 956d803c86057250fe70d95646c29df0 534 Pfam PF07690 Major Facilitator Superfamily 20 472 8.0E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS03710 596e9d9045b2a7f8011784209ef3639e 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 132 1.9E-5 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS03710 596e9d9045b2a7f8011784209ef3639e 140 Gene3D G3DSA:3.10.180.10 1 140 1.2E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS03710 596e9d9045b2a7f8011784209ef3639e 140 SUPERFAMILY SSF54593 1 138 1.3E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS01205 f7b3cddc3c908644a7d2b46888ffe4ba 554 SUPERFAMILY SSF52540 1 216 7.97E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01205 f7b3cddc3c908644a7d2b46888ffe4ba 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 13 502 1.9E-13 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CJD35_RS01205 f7b3cddc3c908644a7d2b46888ffe4ba 554 Gene3D G3DSA:3.40.50.300 1 534 1.1E-36 T 28-03-2018 CJD35_RS01205 f7b3cddc3c908644a7d2b46888ffe4ba 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 1.6E-141 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CJD35_RS01205 f7b3cddc3c908644a7d2b46888ffe4ba 554 SUPERFAMILY SSF52540 5 50 2.33E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01205 f7b3cddc3c908644a7d2b46888ffe4ba 554 SUPERFAMILY SSF52540 338 504 2.33E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01205 f7b3cddc3c908644a7d2b46888ffe4ba 554 PIRSF PIRSF003128 1 554 2.6E-150 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CJD35_RS04495 0e28469d283effc2aaa78a12cb4622f5 621 Pfam PF01757 Acyltransferase family 6 326 9.9E-24 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CJD35_RS04495 0e28469d283effc2aaa78a12cb4622f5 621 Gene3D G3DSA:3.40.50.1110 407 619 0.14 T 28-03-2018 CJD35_RS17765 2428575fe9cf96c0bb6ea204480bbfed 127 SUPERFAMILY SSF46626 25 123 8.48E-31 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS17765 2428575fe9cf96c0bb6ea204480bbfed 127 PRINTS PR00604 Class IA and IB cytochrome C signature 116 124 9.2E-22 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS17765 2428575fe9cf96c0bb6ea204480bbfed 127 PRINTS PR00604 Class IA and IB cytochrome C signature 50 65 9.2E-22 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS17765 2428575fe9cf96c0bb6ea204480bbfed 127 PRINTS PR00604 Class IA and IB cytochrome C signature 38 45 9.2E-22 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS17765 2428575fe9cf96c0bb6ea204480bbfed 127 PRINTS PR00604 Class IA and IB cytochrome C signature 66 76 9.2E-22 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS17765 2428575fe9cf96c0bb6ea204480bbfed 127 PRINTS PR00604 Class IA and IB cytochrome C signature 80 96 9.2E-22 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS17765 2428575fe9cf96c0bb6ea204480bbfed 127 PRINTS PR00604 Class IA and IB cytochrome C signature 99 109 9.2E-22 T 28-03-2018 IPR002327 Cytochrome c, class IA/ IB GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS17765 2428575fe9cf96c0bb6ea204480bbfed 127 Pfam PF00034 Cytochrome c 29 124 6.4E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS17765 2428575fe9cf96c0bb6ea204480bbfed 127 Gene3D G3DSA:1.10.760.10 2 126 2.0E-27 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS01805 14d56cc9d96675e30d3446b61ab27c83 430 Pfam PF07486 Cell Wall Hydrolase 109 217 1.5E-23 T 28-03-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 CJD35_RS12510 a0a2b2373827d639a76213763c220c41 379 Gene3D G3DSA:3.90.180.10 278 379 8.5E-7 T 28-03-2018 CJD35_RS12510 a0a2b2373827d639a76213763c220c41 379 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 135 2.8E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS12510 a0a2b2373827d639a76213763c220c41 379 SUPERFAMILY SSF51735 152 340 9.58E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS12510 a0a2b2373827d639a76213763c220c41 379 Pfam PF13823 Alcohol dehydrogenase GroES-associated 2 23 7.4E-9 T 28-03-2018 IPR027399 Alcohol dehydrogenase GroES-associated CJD35_RS12510 a0a2b2373827d639a76213763c220c41 379 SUPERFAMILY SSF50129 2 169 6.83E-61 T 28-03-2018 IPR011032 GroES-like CJD35_RS12510 a0a2b2373827d639a76213763c220c41 379 Gene3D G3DSA:3.90.180.10 1 171 8.8E-41 T 28-03-2018 CJD35_RS12510 a0a2b2373827d639a76213763c220c41 379 Pfam PF00107 Zinc-binding dehydrogenase 186 318 1.1E-10 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS12510 a0a2b2373827d639a76213763c220c41 379 Gene3D G3DSA:3.40.50.10730 172 277 6.9E-19 T 28-03-2018 CJD35_RS20785 6c5b1c1fbedaee61cbd25aeee191434b 487 SUPERFAMILY SSF54427 7 110 3.51E-10 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS20785 6c5b1c1fbedaee61cbd25aeee191434b 487 Gene3D G3DSA:3.30.200.20 135 252 1.4E-5 T 28-03-2018 CJD35_RS20785 6c5b1c1fbedaee61cbd25aeee191434b 487 Pfam PF02958 Ecdysteroid kinase 171 419 4.1E-17 T 28-03-2018 IPR004119 Protein of unknown function DUF227 CJD35_RS20785 6c5b1c1fbedaee61cbd25aeee191434b 487 Gene3D G3DSA:3.90.1200.10 255 483 8.8E-14 T 28-03-2018 CJD35_RS20785 6c5b1c1fbedaee61cbd25aeee191434b 487 SUPERFAMILY SSF56112 139 426 4.37E-28 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS20785 6c5b1c1fbedaee61cbd25aeee191434b 487 Gene3D G3DSA:3.10.450.50 2 110 7.8E-9 T 28-03-2018 CJD35_RS20785 6c5b1c1fbedaee61cbd25aeee191434b 487 SMART SM00587 248 423 1.9E-5 T 28-03-2018 IPR015897 CHK kinase-like CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 Gene3D G3DSA:3.40.50.2300 194 324 5.3E-43 T 28-03-2018 CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 ProSitePatterns PS00356 LacI-type HTH domain signature. 22 40 - T 28-03-2018 CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 SUPERFAMILY SSF53822 80 356 2.36E-68 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 Pfam PF00356 Bacterial regulatory proteins, lacI family 21 66 9.9E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 Gene3D G3DSA:1.10.10.60 11 32 0.0016 T 28-03-2018 CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 Gene3D G3DSA:3.40.50.2300 73 193 9.5E-30 T 28-03-2018 CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 SUPERFAMILY SSF47413 20 75 3.75E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 SMART SM00354 19 89 3.9E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 Pfam PF13377 Periplasmic binding protein-like domain 186 350 2.5E-35 T 28-03-2018 CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 21 31 7.0E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 31 41 7.0E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS00045 41ab71bfea6bb769ae1f88bdd9f8c411 363 Gene3D G3DSA:1.10.260.40 33 72 1.2E-20 T 28-03-2018 CJD35_RS20850 9c5f91ab911f6988db8edeb330adb52d 330 Pfam PF00437 Type II/IV secretion system protein 12 311 7.9E-64 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CJD35_RS20850 9c5f91ab911f6988db8edeb330adb52d 330 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 18 324 2.0E-114 T 28-03-2018 IPR014155 Type IV secretion system protein VirB11 GO:0005737|GO:0006810|GO:0009405 CJD35_RS20850 9c5f91ab911f6988db8edeb330adb52d 330 Gene3D G3DSA:3.40.50.300 114 329 2.0E-15 T 28-03-2018 CJD35_RS20850 9c5f91ab911f6988db8edeb330adb52d 330 SUPERFAMILY SSF52540 11 312 4.21E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20850 9c5f91ab911f6988db8edeb330adb52d 330 Gene3D G3DSA:3.30.450.90 6 113 3.9E-23 T 28-03-2018 CJD35_RS06400 a18ac7c54b012e2c40af6dfc8898325f 376 Gene3D G3DSA:1.10.540.10 1 114 3.3E-22 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS06400 a18ac7c54b012e2c40af6dfc8898325f 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 112 5.5E-18 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS06400 a18ac7c54b012e2c40af6dfc8898325f 376 SUPERFAMILY SSF47203 218 360 1.93E-41 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS06400 a18ac7c54b012e2c40af6dfc8898325f 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 220 353 1.1E-33 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS06400 a18ac7c54b012e2c40af6dfc8898325f 376 Gene3D G3DSA:2.40.110.10 116 210 1.7E-6 T 28-03-2018 CJD35_RS06400 a18ac7c54b012e2c40af6dfc8898325f 376 Gene3D G3DSA:1.20.140.10 211 375 3.0E-40 T 28-03-2018 CJD35_RS06400 a18ac7c54b012e2c40af6dfc8898325f 376 SUPERFAMILY SSF56645 1 204 9.69E-39 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS00640 1ffacc33ba216d84088c50efcbc9b606 260 Pfam PF01553 Acyltransferase 58 173 1.8E-14 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CJD35_RS00640 1ffacc33ba216d84088c50efcbc9b606 260 Gene3D G3DSA:3.40.1130.10 32 255 1.9E-26 T 28-03-2018 CJD35_RS00640 1ffacc33ba216d84088c50efcbc9b606 260 SUPERFAMILY SSF69593 19 238 1.7E-23 T 28-03-2018 CJD35_RS00640 1ffacc33ba216d84088c50efcbc9b606 260 SMART SM00563 63 177 4.8E-17 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CJD35_RS01235 7e176ae63f6e94046484698a6435b5d1 192 SUPERFAMILY SSF57716 142 190 4.28E-16 T 28-03-2018 CJD35_RS01235 7e176ae63f6e94046484698a6435b5d1 192 Pfam PF00265 Thymidine kinase 2 186 2.0E-49 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CJD35_RS01235 7e176ae63f6e94046484698a6435b5d1 192 Gene3D G3DSA:3.30.60.20 142 191 9.2E-19 T 28-03-2018 CJD35_RS01235 7e176ae63f6e94046484698a6435b5d1 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.819 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CJD35_RS01235 7e176ae63f6e94046484698a6435b5d1 192 Gene3D G3DSA:3.40.50.300 1 141 6.6E-41 T 28-03-2018 CJD35_RS01235 7e176ae63f6e94046484698a6435b5d1 192 PIRSF PIRSF035805 1 191 5.8E-52 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CJD35_RS01235 7e176ae63f6e94046484698a6435b5d1 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 28-03-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CJD35_RS01235 7e176ae63f6e94046484698a6435b5d1 192 SUPERFAMILY SSF52540 1 140 1.2E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS11890 c06334aea85774f69301247c6785f36b 315 Gene3D G3DSA:3.40.50.1820 19 315 6.6E-55 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS11890 c06334aea85774f69301247c6785f36b 315 SUPERFAMILY SSF53474 40 308 1.33E-60 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS11890 c06334aea85774f69301247c6785f36b 315 Pfam PF07859 alpha/beta hydrolase fold 78 288 9.9E-61 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CJD35_RS11695 48aee3d600f6c19e4078b094b98e775b 407 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 61 79 1.3E-7 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS11695 48aee3d600f6c19e4078b094b98e775b 407 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 278 297 1.3E-7 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS11695 48aee3d600f6c19e4078b094b98e775b 407 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 81 93 1.3E-7 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS11695 48aee3d600f6c19e4078b094b98e775b 407 Gene3D G3DSA:3.20.20.10 40 274 2.3E-49 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS11695 48aee3d600f6c19e4078b094b98e775b 407 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 42 287 3.1E-31 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CJD35_RS11695 48aee3d600f6c19e4078b094b98e775b 407 SUPERFAMILY SSF50621 272 405 2.3E-33 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CJD35_RS11695 48aee3d600f6c19e4078b094b98e775b 407 Gene3D G3DSA:2.40.37.10 275 407 1.5E-29 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CJD35_RS11695 48aee3d600f6c19e4078b094b98e775b 407 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 189 384 6.8E-15 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CJD35_RS11695 48aee3d600f6c19e4078b094b98e775b 407 SUPERFAMILY SSF51419 31 290 3.6E-60 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS11695 48aee3d600f6c19e4078b094b98e775b 407 TIGRFAM TIGR03099 dCO2ase_PEP1: pyridoxal-dependent decarboxylase, exosortase A system-associated 11 406 1.1E-163 T 28-03-2018 IPR017530 Pyridoxal-dependent decarboxylase, exosortase system type 1 associated CJD35_RS05680 19ee4bf45ca7278c8327a536ca79d1c9 197 Gene3D G3DSA:3.40.50.300 1 195 3.9E-28 T 28-03-2018 CJD35_RS05680 19ee4bf45ca7278c8327a536ca79d1c9 197 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 194 23.674 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CJD35_RS05680 19ee4bf45ca7278c8327a536ca79d1c9 197 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 184 3.5E-32 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CJD35_RS05680 19ee4bf45ca7278c8327a536ca79d1c9 197 Pfam PF01121 Dephospho-CoA kinase 3 173 1.3E-38 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CJD35_RS05680 19ee4bf45ca7278c8327a536ca79d1c9 197 SUPERFAMILY SSF52540 1 189 9.86E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21635 0bb305d012631d5739d7a5e670a6308c 144 Gene3D G3DSA:2.10.109.10 24 142 2.4E-18 T 28-03-2018 CJD35_RS21635 0bb305d012631d5739d7a5e670a6308c 144 Pfam PF00717 Peptidase S24-like 59 126 2.7E-8 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS21635 0bb305d012631d5739d7a5e670a6308c 144 SUPERFAMILY SSF51306 22 137 5.06E-23 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS02770 285f9612c3be730d824d6c7b9db80feb 369 SUPERFAMILY SSF56634 182 354 1.11E-42 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02770 285f9612c3be730d824d6c7b9db80feb 369 SUPERFAMILY SSF56634 27 154 1.11E-42 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS02770 285f9612c3be730d824d6c7b9db80feb 369 Gene3D G3DSA:2.40.180.10 4 360 8.7E-59 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CJD35_RS17805 b34eb9442958656ce11958b2f2d234c6 383 Pfam PF06433 Methylamine dehydrogenase heavy chain (MADH) 58 375 6.1E-49 T 28-03-2018 IPR009451 Amine dehydrogenase heavy chain GO:0030058|GO:0042597|GO:0055114 KEGG: 00680+1.4.9.1|MetaCyc: PWY-6967 CJD35_RS17805 b34eb9442958656ce11958b2f2d234c6 383 SUPERFAMILY SSF50969 27 374 3.14E-56 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CJD35_RS17805 b34eb9442958656ce11958b2f2d234c6 383 Gene3D G3DSA:2.130.10.10 306 383 1.2E-5 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS17805 b34eb9442958656ce11958b2f2d234c6 383 Gene3D G3DSA:2.130.10.10 16 305 7.2E-34 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS04400 f5ecd2fedc1f4f6d69bcc558bb75f59d 95 Pfam PF12096 Protein of unknown function (DUF3572) 15 94 1.4E-25 T 28-03-2018 IPR021955 Protein of unknown function DUF3572 CJD35_RS00920 bc34c29f741f5c001cbdd59d4258bb6e 171 ProSitePatterns PS00855 Signal peptidases II signature. 105 117 - T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CJD35_RS00920 bc34c29f741f5c001cbdd59d4258bb6e 171 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 6 164 14.2 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CJD35_RS00920 bc34c29f741f5c001cbdd59d4258bb6e 171 Pfam PF01252 Signal peptidase (SPase) II 15 157 3.1E-32 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CJD35_RS00920 bc34c29f741f5c001cbdd59d4258bb6e 171 TIGRFAM TIGR00077 lspA: signal peptidase II 13 163 4.5E-31 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CJD35_RS00920 bc34c29f741f5c001cbdd59d4258bb6e 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 1.1E-15 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CJD35_RS00920 bc34c29f741f5c001cbdd59d4258bb6e 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 139 155 1.1E-15 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CJD35_RS00920 bc34c29f741f5c001cbdd59d4258bb6e 171 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 56 64 1.1E-15 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CJD35_RS00590 80224bec8290e6dbd8e6fcf098604d43 382 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 368 1.7E-79 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CJD35_RS00590 80224bec8290e6dbd8e6fcf098604d43 382 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 286 4.7E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJD35_RS00590 80224bec8290e6dbd8e6fcf098604d43 382 SUPERFAMILY SSF111369 48 293 1.7E-77 T 28-03-2018 CJD35_RS00590 80224bec8290e6dbd8e6fcf098604d43 382 Gene3D G3DSA:2.40.50.100 160 372 7.6E-9 T 28-03-2018 CJD35_RS00590 80224bec8290e6dbd8e6fcf098604d43 382 Gene3D G3DSA:2.40.50.100 58 130 4.3E-18 T 28-03-2018 CJD35_RS12850 73e71b253f0d9e7fb122d4ca035c53e6 390 PIRSF PIRSF038941 9 390 4.2E-152 T 28-03-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 CJD35_RS12850 73e71b253f0d9e7fb122d4ca035c53e6 390 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 129 344 1.2E-7 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CJD35_RS12850 73e71b253f0d9e7fb122d4ca035c53e6 390 SUPERFAMILY SSF51419 27 263 4.8E-39 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS12850 73e71b253f0d9e7fb122d4ca035c53e6 390 Gene3D G3DSA:2.40.37.10 257 389 3.3E-25 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CJD35_RS12850 73e71b253f0d9e7fb122d4ca035c53e6 390 SUPERFAMILY SSF50621 233 370 1.63E-25 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CJD35_RS12850 73e71b253f0d9e7fb122d4ca035c53e6 390 Gene3D G3DSA:3.20.20.10 28 256 6.7E-46 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS13065 f188d52b891eceab39099de654498f5a 625 SUPERFAMILY SSF55486 29 625 1.69E-195 T 28-03-2018 CJD35_RS13065 f188d52b891eceab39099de654498f5a 625 Gene3D G3DSA:1.10.1370.10 36 619 5.9E-61 T 28-03-2018 CJD35_RS13065 f188d52b891eceab39099de654498f5a 625 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 223 250 5.6E-28 T 28-03-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 CJD35_RS13065 f188d52b891eceab39099de654498f5a 625 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 521 549 5.6E-28 T 28-03-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 CJD35_RS13065 f188d52b891eceab39099de654498f5a 625 PRINTS PR00791 Peptidyl-dipeptidase A (M2) metalloprotease family signature 258 279 5.6E-28 T 28-03-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 CJD35_RS13065 f188d52b891eceab39099de654498f5a 625 Pfam PF01401 Angiotensin-converting enzyme 28 625 2.1E-202 T 28-03-2018 IPR001548 Peptidase M2, peptidyl-dipeptidase A GO:0006508|GO:0008237|GO:0008241|GO:0016020 CJD35_RS06500 f8cc3740cd1a10d47ce95c4f4bd461ff 420 PIRSF PIRSF016578 27 417 2.2E-13 T 28-03-2018 CJD35_RS06500 f8cc3740cd1a10d47ce95c4f4bd461ff 420 Gene3D G3DSA:2.40.110.10 152 246 2.5E-26 T 28-03-2018 CJD35_RS06500 f8cc3740cd1a10d47ce95c4f4bd461ff 420 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 257 413 5.0E-40 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS06500 f8cc3740cd1a10d47ce95c4f4bd461ff 420 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 153 244 1.5E-17 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CJD35_RS06500 f8cc3740cd1a10d47ce95c4f4bd461ff 420 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 33 148 3.3E-21 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS06500 f8cc3740cd1a10d47ce95c4f4bd461ff 420 SUPERFAMILY SSF47203 255 416 9.5E-43 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CJD35_RS06500 f8cc3740cd1a10d47ce95c4f4bd461ff 420 Gene3D G3DSA:1.20.140.10 247 419 1.1E-47 T 28-03-2018 CJD35_RS06500 f8cc3740cd1a10d47ce95c4f4bd461ff 420 SUPERFAMILY SSF56645 23 267 1.18E-56 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CJD35_RS06500 f8cc3740cd1a10d47ce95c4f4bd461ff 420 Gene3D G3DSA:1.10.540.10 12 151 4.3E-24 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CJD35_RS05925 b46649ef5e4cdafeaaaf51b965b43baf 326 Gene3D G3DSA:3.20.20.370 16 296 7.7E-20 T 28-03-2018 CJD35_RS05925 b46649ef5e4cdafeaaaf51b965b43baf 326 SUPERFAMILY SSF88713 41 289 6.12E-15 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CJD35_RS08115 701cb8ec58c38a1cc67ed7fc12890c6d 121 Pfam PF06127 Protein of unknown function (DUF962) 5 97 5.6E-32 T 28-03-2018 IPR009305 Protein of unknown function DUF962 CJD35_RS07900 5d5b5165675ba13a1c5d992527337bab 226 Pfam PF00072 Response regulator receiver domain 5 114 5.5E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS07900 5d5b5165675ba13a1c5d992527337bab 226 SUPERFAMILY SSF52172 3 180 1.62E-35 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS07900 5d5b5165675ba13a1c5d992527337bab 226 Gene3D G3DSA:3.40.50.2300 1 122 6.3E-30 T 28-03-2018 CJD35_RS07900 5d5b5165675ba13a1c5d992527337bab 226 SMART SM00448 3 114 2.1E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS07900 5d5b5165675ba13a1c5d992527337bab 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 224 4.0E-29 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS07900 5d5b5165675ba13a1c5d992527337bab 226 Gene3D G3DSA:1.10.10.10 123 226 1.1E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07900 5d5b5165675ba13a1c5d992527337bab 226 SMART SM00862 149 224 6.4E-31 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS06370 21858bb5a2ba249db3cdd40f343e0bba 383 SUPERFAMILY SSF53901 17 234 7.2E-8 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06370 21858bb5a2ba249db3cdd40f343e0bba 383 Gene3D G3DSA:3.40.47.10 228 383 4.1E-5 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06370 21858bb5a2ba249db3cdd40f343e0bba 383 PIRSF PIRSF000429 15 374 2.2E-11 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS06370 21858bb5a2ba249db3cdd40f343e0bba 383 SUPERFAMILY SSF53901 238 379 2.8E-14 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06370 21858bb5a2ba249db3cdd40f343e0bba 383 Gene3D G3DSA:3.40.47.10 91 227 4.8E-8 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS01060 af9677b86f96afb3041fb9249ba4bd5e 547 SUPERFAMILY SSF53187 277 523 2.38E-57 T 28-03-2018 CJD35_RS01060 af9677b86f96afb3041fb9249ba4bd5e 547 SUPERFAMILY SSF53187 19 66 2.38E-57 T 28-03-2018 CJD35_RS01060 af9677b86f96afb3041fb9249ba4bd5e 547 Pfam PF02225 PA domain 121 206 2.1E-5 T 28-03-2018 IPR003137 PA domain CJD35_RS01060 af9677b86f96afb3041fb9249ba4bd5e 547 Pfam PF04389 Peptidase family M28 293 502 1.1E-41 T 28-03-2018 IPR007484 Peptidase M28 CJD35_RS01060 af9677b86f96afb3041fb9249ba4bd5e 547 Gene3D G3DSA:3.40.630.10 262 523 2.2E-34 T 28-03-2018 CJD35_RS01060 af9677b86f96afb3041fb9249ba4bd5e 547 Gene3D G3DSA:3.40.630.10 14 106 0.029 T 28-03-2018 CJD35_RS01060 af9677b86f96afb3041fb9249ba4bd5e 547 SUPERFAMILY SSF52025 112 211 6.67E-7 T 28-03-2018 CJD35_RS01060 af9677b86f96afb3041fb9249ba4bd5e 547 Gene3D G3DSA:3.50.30.30 107 261 4.6E-14 T 28-03-2018 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 Gene3D G3DSA:2.40.40.20 7 92 4.4E-21 T 28-03-2018 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 ProSitePatterns PS00674 AAA-protein family signature. 342 360 - T 28-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 Gene3D G3DSA:3.40.50.300 464 654 1.0E-59 T 28-03-2018 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 Gene3D G3DSA:3.40.50.300 187 377 7.0E-61 T 28-03-2018 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 Gene3D G3DSA:1.10.8.60 378 463 8.0E-27 T 28-03-2018 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 Gene3D G3DSA:1.10.8.60 655 742 1.6E-25 T 28-03-2018 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 ProSitePatterns PS00674 AAA-protein family signature. 617 635 - T 28-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 SUPERFAMILY SSF52540 201 467 1.4E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 TIGRFAM TIGR01243 CDC48: AAA family ATPase, CDC48 subfamily 10 741 9.4E-277 T 28-03-2018 IPR005938 AAA ATPase, CDC48 family GO:0016787 Reactome: R-HSA-110320|Reactome: R-HSA-3371511|Reactome: R-HSA-382556|Reactome: R-HSA-532668|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5678895|Reactome: R-HSA-5689877|Reactome: R-HSA-5689896|Reactome: R-HSA-6798695|Reactome: R-HSA-8866654|Reactome: R-HSA-8876725 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 SMART SM00382 238 374 5.7E-24 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 SMART SM00382 511 649 2.6E-22 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 SMART SM01072 110 194 2.4E-10 T 28-03-2018 IPR004201 CDC48, domain 2 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 Pfam PF02359 Cell division protein 48 (CDC48), N-terminal domain 10 92 3.1E-23 T 28-03-2018 IPR003338 CDC48, N-terminal subdomain CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 Pfam PF02933 Cell division protein 48 (CDC48), domain 2 111 193 5.6E-16 T 28-03-2018 IPR004201 CDC48, domain 2 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 Gene3D G3DSA:3.10.330.10 93 186 2.9E-20 T 28-03-2018 IPR029067 CDC48 domain 2-like CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 SUPERFAMILY SSF52540 473 738 1.36E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 516 646 2.8E-44 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 242 371 3.7E-44 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 SMART SM01073 10 94 8.5E-31 T 28-03-2018 IPR003338 CDC48, N-terminal subdomain CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 SUPERFAMILY SSF54585 96 207 1.41E-15 T 28-03-2018 IPR029067 CDC48 domain 2-like CJD35_RS03630 43c253dea0d9a88f4c5ea01b85dd7097 761 SUPERFAMILY SSF50692 8 92 2.98E-23 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CJD35_RS18975 0720f6fd6051782f2db746f7d408a480 108 PIRSF PIRSF002070 1 108 2.9E-20 T 28-03-2018 CJD35_RS18975 0720f6fd6051782f2db746f7d408a480 108 Pfam PF00436 Single-strand binding protein family 1 107 4.6E-18 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CJD35_RS18975 0720f6fd6051782f2db746f7d408a480 108 Gene3D G3DSA:2.40.50.140 1 108 4.6E-24 T 28-03-2018 CJD35_RS18975 0720f6fd6051782f2db746f7d408a480 108 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 105 7.1E-16 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CJD35_RS18975 0720f6fd6051782f2db746f7d408a480 108 SUPERFAMILY SSF50249 1 108 4.8E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS19655 9c993df1aab838055017da40a368ab3c 287 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 28 115 6.2E-23 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CJD35_RS19655 9c993df1aab838055017da40a368ab3c 287 SUPERFAMILY SSF54675 10 117 2.83E-28 T 28-03-2018 CJD35_RS19655 9c993df1aab838055017da40a368ab3c 287 PIRSF PIRSF006250 10 286 5.1E-84 T 28-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CJD35_RS19655 9c993df1aab838055017da40a368ab3c 287 Gene3D G3DSA:3.20.20.70 144 273 4.7E-44 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS19655 9c993df1aab838055017da40a368ab3c 287 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 19 282 1.0E-87 T 28-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CJD35_RS19655 9c993df1aab838055017da40a368ab3c 287 Gene3D G3DSA:3.90.1170.20 1 143 4.3E-42 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CJD35_RS19655 9c993df1aab838055017da40a368ab3c 287 SUPERFAMILY SSF51690 118 282 3.34E-56 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CJD35_RS19655 9c993df1aab838055017da40a368ab3c 287 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 118 282 1.4E-54 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CJD35_RS15450 81196da54c89899c96f615edf69f110b 312 Gene3D G3DSA:2.102.10.10 2 141 2.5E-29 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS15450 81196da54c89899c96f615edf69f110b 312 SUPERFAMILY SSF50022 6 120 1.23E-32 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS15450 81196da54c89899c96f615edf69f110b 312 Pfam PF00355 Rieske [2Fe-2S] domain 8 96 7.4E-23 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS18740 488d65270d4e279e5cb432c4b5719feb 89 Pfam PF09313 Domain of unknown function (DUF1971) 6 80 1.0E-21 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 CJD35_RS18740 488d65270d4e279e5cb432c4b5719feb 89 SUPERFAMILY SSF51197 4 87 1.11E-23 T 28-03-2018 CJD35_RS18740 488d65270d4e279e5cb432c4b5719feb 89 Gene3D G3DSA:2.60.120.10 2 89 1.7E-24 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS07075 d6864112f423050fdb896bef95b530fa 190 Pfam PF00196 Bacterial regulatory proteins, luxR family 130 184 6.3E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS07075 d6864112f423050fdb896bef95b530fa 190 SUPERFAMILY SSF55785 4 106 2.79E-22 T 28-03-2018 IPR000014 PAS domain CJD35_RS07075 d6864112f423050fdb896bef95b530fa 190 SUPERFAMILY SSF46894 121 189 5.44E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS07075 d6864112f423050fdb896bef95b530fa 190 Gene3D G3DSA:1.10.10.10 136 190 7.1E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07075 d6864112f423050fdb896bef95b530fa 190 Pfam PF13426 PAS domain 17 104 1.5E-16 T 28-03-2018 IPR000014 PAS domain CJD35_RS07075 d6864112f423050fdb896bef95b530fa 190 SMART SM00421 128 185 3.8E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS07075 d6864112f423050fdb896bef95b530fa 190 Gene3D G3DSA:3.30.450.20 1 135 1.8E-19 T 28-03-2018 CJD35_RS07075 d6864112f423050fdb896bef95b530fa 190 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 105 1.4E-10 T 28-03-2018 IPR000014 PAS domain CJD35_RS07075 d6864112f423050fdb896bef95b530fa 190 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 161 1.8E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS07075 d6864112f423050fdb896bef95b530fa 190 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 173 1.8E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS07075 d6864112f423050fdb896bef95b530fa 190 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 131 145 1.8E-9 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS03620 b0f47977ed4d00d8dc2c93ce373d3341 366 SMART SM00421 304 361 2.0E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS03620 b0f47977ed4d00d8dc2c93ce373d3341 366 Gene3D G3DSA:1.10.10.10 139 362 3.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03620 b0f47977ed4d00d8dc2c93ce373d3341 366 Pfam PF00196 Bacterial regulatory proteins, luxR family 307 360 6.1E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS03620 b0f47977ed4d00d8dc2c93ce373d3341 366 SUPERFAMILY SSF46894 294 360 2.82E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS12970 eaba98653e5ec0b402a630ebb35abae0 334 TIGRFAM TIGR00433 bioB: biotin synthase 18 319 7.4E-118 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CJD35_RS12970 eaba98653e5ec0b402a630ebb35abae0 334 Gene3D G3DSA:3.20.20.70 7 324 1.6E-57 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS12970 eaba98653e5ec0b402a630ebb35abae0 334 SUPERFAMILY SSF102114 8 323 2.62E-88 T 28-03-2018 CJD35_RS12970 eaba98653e5ec0b402a630ebb35abae0 334 Pfam PF04055 Radical SAM superfamily 53 209 1.3E-16 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CJD35_RS12970 eaba98653e5ec0b402a630ebb35abae0 334 PIRSF PIRSF001619 1 328 5.2E-132 T 28-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CJD35_RS12970 eaba98653e5ec0b402a630ebb35abae0 334 SMART SM00729 46 258 4.1E-44 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CJD35_RS12970 eaba98653e5ec0b402a630ebb35abae0 334 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 223 319 4.6E-19 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CJD35_RS12970 eaba98653e5ec0b402a630ebb35abae0 334 Hamap MF_01694 Biotin synthase [bioB]. 8 322 40.623 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CJD35_RS12970 eaba98653e5ec0b402a630ebb35abae0 334 SMART SM00876 223 321 3.3E-42 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CJD35_RS19395 f6b4420fa48e80ae5c7632a93285a7be 91 Pfam PF01047 MarR family 36 80 1.4E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CJD35_RS19395 f6b4420fa48e80ae5c7632a93285a7be 91 Gene3D G3DSA:1.10.10.10 19 86 6.9E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19395 f6b4420fa48e80ae5c7632a93285a7be 91 SUPERFAMILY SSF46785 24 86 1.41E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS11500 6ade2375339cccb224abe2a7fbc63bf9 603 SMART SM00885 68 278 7.6E-18 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CJD35_RS11500 6ade2375339cccb224abe2a7fbc63bf9 603 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 239 533 3.3E-65 T 28-03-2018 IPR006500 DNA primase, phage/plasmid CJD35_RS11500 6ade2375339cccb224abe2a7fbc63bf9 603 Pfam PF08706 D5 N terminal like 68 276 1.0E-12 T 28-03-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal CJD35_RS05135 f7f3a7ec6783a5c6abe8fa74a394aec7 259 SUPERFAMILY SSF103088 85 238 2.49E-12 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS05135 f7f3a7ec6783a5c6abe8fa74a394aec7 259 Pfam PF00691 OmpA family 97 222 1.1E-5 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS05135 f7f3a7ec6783a5c6abe8fa74a394aec7 259 Gene3D G3DSA:3.30.1330.60 41 256 1.9E-27 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS14625 ca4744855efa423b5b2d30f4cda73523 186 Pfam PF03061 Thioesterase superfamily 100 169 6.6E-5 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CJD35_RS14625 ca4744855efa423b5b2d30f4cda73523 186 Gene3D G3DSA:3.10.129.10 32 185 3.8E-23 T 28-03-2018 CJD35_RS14625 ca4744855efa423b5b2d30f4cda73523 186 SUPERFAMILY SSF54637 3 179 2.96E-35 T 28-03-2018 IPR029069 HotDog domain CJD35_RS14095 f12cdf037ce17723c62660e0717b50e2 160 Gene3D G3DSA:2.30.30.100 5 74 1.8E-31 T 28-03-2018 CJD35_RS14095 f12cdf037ce17723c62660e0717b50e2 160 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 88 146 8.2E-23 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CJD35_RS14095 f12cdf037ce17723c62660e0717b50e2 160 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 66 1.5E-30 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CJD35_RS14095 f12cdf037ce17723c62660e0717b50e2 160 SUPERFAMILY SSF50182 88 146 2.34E-19 T 28-03-2018 IPR010920 LSM domain CJD35_RS14095 f12cdf037ce17723c62660e0717b50e2 160 SUPERFAMILY SSF50182 7 71 1.2E-22 T 28-03-2018 IPR010920 LSM domain CJD35_RS14095 f12cdf037ce17723c62660e0717b50e2 160 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 84 146 22.706 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CJD35_RS14095 f12cdf037ce17723c62660e0717b50e2 160 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 66 29.29 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CJD35_RS14095 f12cdf037ce17723c62660e0717b50e2 160 Pfam PF17209 Hfq protein 88 148 4.8E-24 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CJD35_RS14095 f12cdf037ce17723c62660e0717b50e2 160 Pfam PF17209 Hfq protein 8 70 1.3E-30 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CJD35_RS14095 f12cdf037ce17723c62660e0717b50e2 160 Gene3D G3DSA:2.30.30.100 85 148 3.9E-25 T 28-03-2018 CJD35_RS20520 a0c18bcef255702fdff79daa366730a3 283 Pfam PF03743 Bacterial conjugation TrbI-like protein 241 282 5.6E-10 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CJD35_RS03785 9b693f273aebf0554a2d1cf867c98b65 344 Gene3D G3DSA:1.25.40.70 258 344 1.7E-6 T 28-03-2018 CJD35_RS03785 9b693f273aebf0554a2d1cf867c98b65 344 Gene3D G3DSA:3.30.70.20 193 257 3.1E-9 T 28-03-2018 CJD35_RS03785 9b693f273aebf0554a2d1cf867c98b65 344 Gene3D G3DSA:3.30.70.20 122 192 0.0037 T 28-03-2018 CJD35_RS03785 9b693f273aebf0554a2d1cf867c98b65 344 SUPERFAMILY SSF46548 132 249 2.77E-19 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CJD35_RS03785 9b693f273aebf0554a2d1cf867c98b65 344 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 186 197 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJD35_RS03785 9b693f273aebf0554a2d1cf867c98b65 344 Pfam PF08331 Domain of unknown function (DUF1730) 57 133 3.9E-22 T 28-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CJD35_RS03785 9b693f273aebf0554a2d1cf867c98b65 344 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 1 309 44.977 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CJD35_RS03785 9b693f273aebf0554a2d1cf867c98b65 344 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 9 341 6.6E-132 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CJD35_RS03785 9b693f273aebf0554a2d1cf867c98b65 344 Pfam PF13484 4Fe-4S double cluster binding domain 185 249 8.5E-19 T 28-03-2018 CJD35_RS15975 b05c2c0be5d2a14984f450ccb2dd6363 383 Gene3D G3DSA:3.40.50.300 80 367 2.4E-30 T 28-03-2018 CJD35_RS15975 b05c2c0be5d2a14984f450ccb2dd6363 383 SUPERFAMILY SSF52540 207 343 2.2E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15975 b05c2c0be5d2a14984f450ccb2dd6363 383 SUPERFAMILY SSF52540 82 125 2.2E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15975 b05c2c0be5d2a14984f450ccb2dd6363 383 Pfam PF13469 Sulfotransferase family 84 332 2.1E-35 T 28-03-2018 CJD35_RS07105 6eacc65b7236c41568c761843ac4d5ca 291 Pfam PF03641 Possible lysine decarboxylase 149 278 2.3E-31 T 28-03-2018 IPR031100 LOG family CJD35_RS07105 6eacc65b7236c41568c761843ac4d5ca 291 Gene3D G3DSA:3.40.50.450 49 288 1.1E-67 T 28-03-2018 CJD35_RS07105 6eacc65b7236c41568c761843ac4d5ca 291 SUPERFAMILY SSF102405 41 279 9.31E-50 T 28-03-2018 CJD35_RS03505 a6c363f61d1c8c0e1e88355e6421f7d1 305 SUPERFAMILY SSF103481 49 148 1.03E-9 T 28-03-2018 CJD35_RS03505 a6c363f61d1c8c0e1e88355e6421f7d1 305 SUPERFAMILY SSF103481 205 303 1.1E-8 T 28-03-2018 CJD35_RS03505 a6c363f61d1c8c0e1e88355e6421f7d1 305 Pfam PF00892 EamA-like transporter family 162 301 6.2E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS03190 65e2433d8080bdbc897baf614efc7d3b 92 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 21 85 2.0E-15 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CJD35_RS03190 65e2433d8080bdbc897baf614efc7d3b 92 Gene3D G3DSA:1.10.287.1160 57 85 1.3E-11 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CJD35_RS03190 65e2433d8080bdbc897baf614efc7d3b 92 SUPERFAMILY SSF101498 29 84 2.88E-10 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CJD35_RS03190 65e2433d8080bdbc897baf614efc7d3b 92 Pfam PF04316 Anti-sigma-28 factor, FlgM 37 84 4.1E-12 T 28-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CJD35_RS07790 d6d91b9f0a1137d048f91c06fd5b7bdf 292 SUPERFAMILY SSF56281 16 281 1.9E-55 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS07790 d6d91b9f0a1137d048f91c06fd5b7bdf 292 Pfam PF00753 Metallo-beta-lactamase superfamily 37 208 1.7E-18 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS07790 d6d91b9f0a1137d048f91c06fd5b7bdf 292 SMART SM00849 37 208 7.3E-28 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS07790 d6d91b9f0a1137d048f91c06fd5b7bdf 292 Gene3D G3DSA:3.60.15.10 30 270 3.7E-36 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS07840 81b9ad2275902b46025863db3d1d170f 272 Gene3D G3DSA:2.40.30.10 18 110 6.0E-14 T 28-03-2018 CJD35_RS07840 81b9ad2275902b46025863db3d1d170f 272 Gene3D G3DSA:3.40.50.80 112 270 8.8E-19 T 28-03-2018 CJD35_RS07840 81b9ad2275902b46025863db3d1d170f 272 Pfam PF00970 Oxidoreductase FAD-binding domain 28 105 4.4E-6 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CJD35_RS07840 81b9ad2275902b46025863db3d1d170f 272 Pfam PF00175 Oxidoreductase NAD-binding domain 126 243 2.8E-9 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CJD35_RS07840 81b9ad2275902b46025863db3d1d170f 272 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 162 173 3.6E-5 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CJD35_RS07840 81b9ad2275902b46025863db3d1d170f 272 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 65 72 3.6E-5 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CJD35_RS07840 81b9ad2275902b46025863db3d1d170f 272 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 125 144 3.6E-5 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CJD35_RS07840 81b9ad2275902b46025863db3d1d170f 272 SUPERFAMILY SSF52343 117 270 1.28E-30 T 28-03-2018 CJD35_RS07840 81b9ad2275902b46025863db3d1d170f 272 SUPERFAMILY SSF63380 20 113 7.17E-21 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CJD35_RS11170 d2680e1aab0de11b678cec567b7c37e7 179 Gene3D G3DSA:3.40.30.10 1 174 2.1E-27 T 28-03-2018 CJD35_RS11170 d2680e1aab0de11b678cec567b7c37e7 179 Pfam PF08534 Redoxin 29 151 8.1E-29 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CJD35_RS11170 d2680e1aab0de11b678cec567b7c37e7 179 SUPERFAMILY SSF52833 2 175 2.75E-38 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS05075 a0c459e4f0a474d6ffe9fbb9d5bccbdf 236 Pfam PF13471 Transglutaminase-like superfamily 121 234 4.9E-21 T 28-03-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 Gene3D G3DSA:1.10.760.10 592 701 1.3E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 270 291 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 TIGRFAM TIGR03075 PQQ_enz_alc_DH: PQQ-dependent dehydrogenase, methanol/ethanol family 39 567 2.2E-200 T 28-03-2018 IPR017512 PQQ-dependent dehydrogenase, methanol/ethanol family GO:0005509|GO:0016020|GO:0016614|GO:0055114 CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 SMART SM00564 194 232 0.001 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 SMART SM00564 98 129 7.8E-7 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 SMART SM00564 507 539 3.6E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 SMART SM00564 148 180 9.9E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 SMART SM00564 298 325 17.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 616 690 1.4E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 SUPERFAMILY SSF50998 47 571 1.31E-167 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 SUPERFAMILY SSF46626 608 693 1.25E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 Gene3D G3DSA:2.140.10.10 30 591 1.1E-122 T 28-03-2018 CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 Pfam PF13360 PQQ-like domain 473 542 3.4E-7 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS20630 f76258756a7ca536755d021651c769e0 709 Pfam PF13360 PQQ-like domain 83 230 1.0E-17 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CJD35_RS19515 dde37cb2d070c2efe25b6d99fae97a01 199 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 168 6.7E-17 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CJD35_RS19515 dde37cb2d070c2efe25b6d99fae97a01 199 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 113 1.3E-20 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CJD35_RS19515 dde37cb2d070c2efe25b6d99fae97a01 199 Gene3D G3DSA:3.40.50.720 103 175 5.7E-17 T 28-03-2018 CJD35_RS19515 dde37cb2d070c2efe25b6d99fae97a01 199 Gene3D G3DSA:3.40.50.720 1 102 9.7E-26 T 28-03-2018 CJD35_RS19515 dde37cb2d070c2efe25b6d99fae97a01 199 SUPERFAMILY SSF51735 84 168 1.04E-15 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS19515 dde37cb2d070c2efe25b6d99fae97a01 199 SUPERFAMILY SSF52283 9 125 2.34E-26 T 28-03-2018 CJD35_RS17080 7302e81eb4e7980cc9c5513a4461f83c 245 Gene3D G3DSA:3.30.450.40 79 171 5.3E-12 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS17080 7302e81eb4e7980cc9c5513a4461f83c 245 SUPERFAMILY SSF55781 71 221 9.81E-23 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS17080 7302e81eb4e7980cc9c5513a4461f83c 245 Gene3D G3DSA:3.30.450.40 172 235 2.5E-7 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS17080 7302e81eb4e7980cc9c5513a4461f83c 245 SMART SM00346 14 103 3.9E-12 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CJD35_RS17080 7302e81eb4e7980cc9c5513a4461f83c 245 Pfam PF09339 IclR helix-turn-helix domain 16 63 3.8E-9 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CJD35_RS17080 7302e81eb4e7980cc9c5513a4461f83c 245 Gene3D G3DSA:1.10.10.10 2 74 3.7E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17080 7302e81eb4e7980cc9c5513a4461f83c 245 SUPERFAMILY SSF46785 14 85 7.64E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10000 c6a803b0326eb69f16a805e69b97407a 283 Gene3D G3DSA:3.40.50.150 29 258 3.0E-21 T 28-03-2018 CJD35_RS10000 c6a803b0326eb69f16a805e69b97407a 283 SUPERFAMILY SSF53335 26 201 1.67E-21 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS10000 c6a803b0326eb69f16a805e69b97407a 283 Pfam PF08241 Methyltransferase domain 52 135 4.1E-13 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CJD35_RS14750 a2229ea137be0e5634200315e1bb6c3e 208 Gene3D G3DSA:2.40.128.110 40 208 4.2E-55 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJD35_RS14750 a2229ea137be0e5634200315e1bb6c3e 208 Pfam PF04264 YceI-like domain 42 204 2.2E-45 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJD35_RS14750 a2229ea137be0e5634200315e1bb6c3e 208 SMART SM00867 41 207 1.0E-67 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJD35_RS14750 a2229ea137be0e5634200315e1bb6c3e 208 SUPERFAMILY SSF101874 40 208 5.36E-55 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CJD35_RS10295 8c9d81529ad2e0ec35dc78735bc0a61a 187 PIRSF PIRSF000239 1 187 2.6E-51 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CJD35_RS10295 8c9d81529ad2e0ec35dc78735bc0a61a 187 Gene3D G3DSA:3.30.1020.10 153 183 4.8E-10 T 28-03-2018 CJD35_RS10295 8c9d81529ad2e0ec35dc78735bc0a61a 187 SUPERFAMILY SSF52833 1 186 1.28E-54 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS10295 8c9d81529ad2e0ec35dc78735bc0a61a 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 6.3E-101 T 28-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CJD35_RS10295 8c9d81529ad2e0ec35dc78735bc0a61a 187 Pfam PF00578 AhpC/TSA family 11 133 2.3E-30 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CJD35_RS10295 8c9d81529ad2e0ec35dc78735bc0a61a 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 3.0E-6 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CJD35_RS10295 8c9d81529ad2e0ec35dc78735bc0a61a 187 Gene3D G3DSA:3.40.30.10 4 152 2.0E-32 T 28-03-2018 CJD35_RS20380 23d983cee9f563439b5092de27cd2468 236 Pfam PF08401 Domain of unknown function (DUF1738) 10 127 3.8E-32 T 28-03-2018 IPR013610 Domain of unknown function DUF1738 CJD35_RS01875 d98769befe1d3ecff2923e57813e4e97 406 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 11 400 4.6E-40 T 28-03-2018 IPR024455 Phage capsid CJD35_RS01875 d98769befe1d3ecff2923e57813e4e97 406 SUPERFAMILY SSF56563 125 400 4.05E-43 T 28-03-2018 CJD35_RS01875 d98769befe1d3ecff2923e57813e4e97 406 Pfam PF05065 Phage capsid family 132 400 4.4E-42 T 28-03-2018 IPR024455 Phage capsid CJD35_RS01875 d98769befe1d3ecff2923e57813e4e97 406 Gene3D G3DSA:3.30.2400.10 154 313 8.5E-29 T 28-03-2018 CJD35_RS07875 ea7325bc6987aab563526816f1b90c05 477 PIRSF PIRSF029063 3 476 8.1E-101 T 28-03-2018 IPR011225 Type IV secretory pathway, VirJ component CJD35_RS07875 ea7325bc6987aab563526816f1b90c05 477 Pfam PF06057 Bacterial virulence protein (VirJ) 286 473 1.6E-65 T 28-03-2018 IPR010333 Bacterial virulence CJD35_RS07875 ea7325bc6987aab563526816f1b90c05 477 Pfam PF06057 Bacterial virulence protein (VirJ) 59 152 1.4E-5 T 28-03-2018 IPR010333 Bacterial virulence CJD35_RS07875 ea7325bc6987aab563526816f1b90c05 477 Gene3D G3DSA:3.40.50.1820 56 265 2.0E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS07875 ea7325bc6987aab563526816f1b90c05 477 SUPERFAMILY SSF53474 48 262 6.89E-19 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS07875 ea7325bc6987aab563526816f1b90c05 477 Gene3D G3DSA:3.40.50.1820 266 458 4.0E-14 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS07875 ea7325bc6987aab563526816f1b90c05 477 SUPERFAMILY SSF53474 279 469 1.07E-17 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS18545 8293863c9c06537b0ff9888ed7fece30 182 SUPERFAMILY SSF47413 31 77 3.75E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS18545 8293863c9c06537b0ff9888ed7fece30 182 Gene3D G3DSA:1.10.260.40 3 89 6.0E-4 T 28-03-2018 CJD35_RS18645 4f73c7422085ee50c006ef0da968bf46 487 Pfam PF06122 Conjugative relaxosome accessory transposon protein 42 400 2.0E-113 T 28-03-2018 IPR010927 Type IV conjugative transfer system protein TraH CJD35_RS16990 ba3637662fca44423f6a0bb9ad44df33 153 Pfam PF11736 Protein of unknown function (DUF3299) 44 129 7.6E-9 T 28-03-2018 IPR021727 Protein of unknown function DUF3299 CJD35_RS07200 3f9be4cb4046ce80c9a3e8d8fab6421e 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 322 338 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CJD35_RS07200 3f9be4cb4046ce80c9a3e8d8fab6421e 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CJD35_RS07200 3f9be4cb4046ce80c9a3e8d8fab6421e 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 352 1.3E-134 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CJD35_RS07200 3f9be4cb4046ce80c9a3e8d8fab6421e 361 PIRSF PIRSF001456 3 360 2.8E-140 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CJD35_RS07200 3f9be4cb4046ce80c9a3e8d8fab6421e 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 355 36.495 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CJD35_RS07200 3f9be4cb4046ce80c9a3e8d8fab6421e 361 Pfam PF01264 Chorismate synthase 10 347 8.5E-137 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CJD35_RS07200 3f9be4cb4046ce80c9a3e8d8fab6421e 361 SUPERFAMILY SSF103263 4 354 7.06E-141 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CJD35_RS07200 3f9be4cb4046ce80c9a3e8d8fab6421e 361 Gene3D G3DSA:3.60.150.10 9 359 1.1E-154 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CJD35_RS07200 3f9be4cb4046ce80c9a3e8d8fab6421e 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CJD35_RS19825 c1c8e3c0b51b8b4be4bc75a3e8e8ba60 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.9E-11 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS19825 c1c8e3c0b51b8b4be4bc75a3e8e8ba60 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.9E-11 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS19825 c1c8e3c0b51b8b4be4bc75a3e8e8ba60 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.9E-11 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS19825 c1c8e3c0b51b8b4be4bc75a3e8e8ba60 91 SUPERFAMILY SSF47729 1 90 6.18E-27 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS19825 c1c8e3c0b51b8b4be4bc75a3e8e8ba60 91 Gene3D G3DSA:4.10.520.10 1 91 1.2E-30 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS19825 c1c8e3c0b51b8b4be4bc75a3e8e8ba60 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.3E-29 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS19825 c1c8e3c0b51b8b4be4bc75a3e8e8ba60 91 SMART SM00411 1 90 1.1E-31 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS00395 e867245f7a534e43696540f66cad2aa5 180 SUPERFAMILY SSF46785 54 169 6.83E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS00395 e867245f7a534e43696540f66cad2aa5 180 Gene3D G3DSA:1.10.10.10 26 171 9.2E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05315 66665a5ed7a699de3f8fc326fbeb1668 404 Pfam PF03743 Bacterial conjugation TrbI-like protein 222 398 6.4E-55 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CJD35_RS06560 ab93fb67faf78a328f35135beab74a68 106 Pfam PF01695 IstB-like ATP binding protein 1 93 2.1E-29 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS06560 ab93fb67faf78a328f35135beab74a68 106 SUPERFAMILY SSF52540 13 96 3.85E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06560 ab93fb67faf78a328f35135beab74a68 106 Gene3D G3DSA:3.40.50.300 3 93 9.7E-4 T 28-03-2018 CJD35_RS10405 1535bdab5b7265a9300fc81347aa3b46 319 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 11 307 34.945 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS10405 1535bdab5b7265a9300fc81347aa3b46 319 Gene3D G3DSA:1.10.150.170 115 213 2.0E-32 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS10405 1535bdab5b7265a9300fc81347aa3b46 319 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 9 304 1.2E-84 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS10405 1535bdab5b7265a9300fc81347aa3b46 319 SUPERFAMILY SSF81799 115 211 8.11E-30 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS10405 1535bdab5b7265a9300fc81347aa3b46 319 SUPERFAMILY SSF53335 211 306 1.84E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS10405 1535bdab5b7265a9300fc81347aa3b46 319 SUPERFAMILY SSF53335 10 114 1.84E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS10405 1535bdab5b7265a9300fc81347aa3b46 319 Gene3D G3DSA:3.40.50.150 1 114 7.9E-5 T 28-03-2018 CJD35_RS10405 1535bdab5b7265a9300fc81347aa3b46 319 Pfam PF01795 MraW methylase family 9 304 9.3E-86 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS10405 1535bdab5b7265a9300fc81347aa3b46 319 PIRSF PIRSF004486 5 308 8.0E-92 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS11835 276d533db7a04cf598d85abca809e39b 225 Gene3D G3DSA:3.30.2350.10 5 215 2.0E-50 T 28-03-2018 CJD35_RS11835 276d533db7a04cf598d85abca809e39b 225 SUPERFAMILY SSF55120 7 210 1.26E-48 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS11835 276d533db7a04cf598d85abca809e39b 225 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 54 68 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS11835 276d533db7a04cf598d85abca809e39b 225 Pfam PF00849 RNA pseudouridylate synthase 16 163 1.0E-30 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS07380 c4d629068fb49db765006fcb5659d996 423 Gene3D G3DSA:2.60.120.10 190 240 4.8E-10 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS07380 c4d629068fb49db765006fcb5659d996 423 Gene3D G3DSA:2.60.120.10 268 391 7.3E-52 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS07380 c4d629068fb49db765006fcb5659d996 423 SUPERFAMILY SSF51182 2 418 7.41E-159 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS07380 c4d629068fb49db765006fcb5659d996 423 Pfam PF04209 homogentisate 1,2-dioxygenase 2 419 3.4E-203 T 28-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 CJD35_RS07380 c4d629068fb49db765006fcb5659d996 423 TIGRFAM TIGR01015 hmgA: homogentisate 1,2-dioxygenase 2 420 6.6E-203 T 28-03-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 CJD35_RS07380 c4d629068fb49db765006fcb5659d996 423 Hamap MF_00334 Homogentisate 1,2-dioxygenase [hmgA]. 2 423 68.605 T 28-03-2018 IPR022950 Homogentisate 1,2-dioxygenase, bacterial GO:0004411|GO:0006559|GO:0006572|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5 CJD35_RS13820 e7b9266599c3a7761fb65b78be455712 403 SUPERFAMILY SSF81301 4 150 1.02E-40 T 28-03-2018 CJD35_RS13820 e7b9266599c3a7761fb65b78be455712 403 Gene3D G3DSA:1.10.3090.10 150 392 4.4E-32 T 28-03-2018 CJD35_RS13820 e7b9266599c3a7761fb65b78be455712 403 SUPERFAMILY SSF81891 151 384 6.02E-41 T 28-03-2018 CJD35_RS13820 e7b9266599c3a7761fb65b78be455712 403 Gene3D G3DSA:3.30.460.10 3 149 7.4E-42 T 28-03-2018 CJD35_RS13820 e7b9266599c3a7761fb65b78be455712 403 Pfam PF01743 Poly A polymerase head domain 31 153 1.2E-29 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CJD35_RS13820 e7b9266599c3a7761fb65b78be455712 403 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 188 242 8.9E-10 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CJD35_RS03320 7e8bd52ba10e6eb8624666544559de6c 514 Pfam PF00112 Papain family cysteine protease 192 270 9.5E-10 T 28-03-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 CJD35_RS03320 7e8bd52ba10e6eb8624666544559de6c 514 Gene3D G3DSA:3.90.70.10 27 284 2.7E-30 T 28-03-2018 CJD35_RS03320 7e8bd52ba10e6eb8624666544559de6c 514 SUPERFAMILY SSF54001 52 273 3.39E-29 T 28-03-2018 CJD35_RS03320 7e8bd52ba10e6eb8624666544559de6c 514 SMART SM00645 56 286 6.1E-4 T 28-03-2018 IPR000668 Peptidase C1A, papain C-terminal GO:0006508|GO:0008234 CJD35_RS03320 7e8bd52ba10e6eb8624666544559de6c 514 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 233 243 - T 28-03-2018 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 CJD35_RS01515 93c4187116087a7e647e401f3c5d0abd 185 Gene3D G3DSA:3.30.1360.40 31 91 1.9E-26 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CJD35_RS01515 93c4187116087a7e647e401f3c5d0abd 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 183 3.7E-61 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CJD35_RS01515 93c4187116087a7e647e401f3c5d0abd 185 SUPERFAMILY SSF55194 4 183 1.96E-66 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CJD35_RS01515 93c4187116087a7e647e401f3c5d0abd 185 Gene3D G3DSA:1.10.132.20 92 184 1.5E-33 T 28-03-2018 CJD35_RS01515 93c4187116087a7e647e401f3c5d0abd 185 Pfam PF01765 Ribosome recycling factor 20 183 7.5E-60 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CJD35_RS01515 93c4187116087a7e647e401f3c5d0abd 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 24.984 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CJD35_RS19595 d6c39dbc3484a13e226d3da52fa27a57 313 Gene3D G3DSA:3.30.360.10 134 311 2.4E-25 T 28-03-2018 CJD35_RS19595 d6c39dbc3484a13e226d3da52fa27a57 313 Gene3D G3DSA:3.40.50.720 1 133 2.1E-36 T 28-03-2018 CJD35_RS19595 d6c39dbc3484a13e226d3da52fa27a57 313 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 120 1.3E-22 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CJD35_RS19595 d6c39dbc3484a13e226d3da52fa27a57 313 SUPERFAMILY SSF55347 125 288 3.71E-10 T 28-03-2018 CJD35_RS19595 d6c39dbc3484a13e226d3da52fa27a57 313 SUPERFAMILY SSF51735 2 140 3.05E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10180 fd5e250b12c935e5e66149f8b4c1b375 167 Gene3D G3DSA:3.40.50.1170 4 162 1.2E-24 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CJD35_RS10180 fd5e250b12c935e5e66149f8b4c1b375 167 SUPERFAMILY SSF53774 5 159 5.5E-31 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CJD35_RS10180 fd5e250b12c935e5e66149f8b4c1b375 167 Pfam PF00710 Asparaginase, N-terminal 8 158 1.0E-23 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CJD35_RS10180 fd5e250b12c935e5e66149f8b4c1b375 167 PRINTS PR00139 Asparaginase/glutaminase family signature 79 97 1.9E-8 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CJD35_RS10180 fd5e250b12c935e5e66149f8b4c1b375 167 PRINTS PR00139 Asparaginase/glutaminase family signature 8 19 1.9E-8 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CJD35_RS12015 2a263dee8e10df7d48ecc3fff524a2c9 126 Gene3D G3DSA:3.10.180.10 1 126 3.5E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS12015 2a263dee8e10df7d48ecc3fff524a2c9 126 SUPERFAMILY SSF54593 2 125 1.38E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS15645 d57b2ad45f88ed8945cfb045cc72dd4d 151 Gene3D G3DSA:3.10.450.50 1 132 3.6E-29 T 28-03-2018 CJD35_RS15645 d57b2ad45f88ed8945cfb045cc72dd4d 151 SUPERFAMILY SSF54427 4 145 4.86E-33 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS15645 d57b2ad45f88ed8945cfb045cc72dd4d 151 Pfam PF13577 SnoaL-like domain 6 131 1.6E-26 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS20790 808f219e5fa1cbc694b0630840e02b02 711 Gene3D G3DSA:2.170.130.10 24 158 2.4E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS20790 808f219e5fa1cbc694b0630840e02b02 711 SUPERFAMILY SSF56935 28 711 2.38E-115 T 28-03-2018 CJD35_RS20790 808f219e5fa1cbc694b0630840e02b02 711 Gene3D G3DSA:2.40.170.20 159 711 3.7E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS20790 808f219e5fa1cbc694b0630840e02b02 711 Pfam PF00593 TonB dependent receptor 295 707 1.3E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS20790 808f219e5fa1cbc694b0630840e02b02 711 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 148 3.3E-13 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17660 cd537c1563819990520e18ba2c541351 535 Pfam PF11941 Domain of unknown function (DUF3459) 450 532 5.0E-10 T 28-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CJD35_RS17660 cd537c1563819990520e18ba2c541351 535 SUPERFAMILY SSF51445 10 464 1.13E-126 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CJD35_RS17660 cd537c1563819990520e18ba2c541351 535 Gene3D G3DSA:3.20.20.80 2 126 4.5E-41 T 28-03-2018 CJD35_RS17660 cd537c1563819990520e18ba2c541351 535 Gene3D G3DSA:2.60.40.1180 465 535 1.5E-6 T 28-03-2018 CJD35_RS17660 cd537c1563819990520e18ba2c541351 535 Gene3D G3DSA:3.90.400.10 127 177 4.5E-26 T 28-03-2018 CJD35_RS17660 cd537c1563819990520e18ba2c541351 535 Pfam PF00128 Alpha amylase, catalytic domain 35 380 6.1E-86 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CJD35_RS17660 cd537c1563819990520e18ba2c541351 535 SMART SM00642 20 405 7.1E-118 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CJD35_RS17660 cd537c1563819990520e18ba2c541351 535 SUPERFAMILY SSF51011 467 533 3.06E-6 T 28-03-2018 CJD35_RS17660 cd537c1563819990520e18ba2c541351 535 Gene3D G3DSA:3.20.20.80 348 464 1.2E-19 T 28-03-2018 CJD35_RS17660 cd537c1563819990520e18ba2c541351 535 Gene3D G3DSA:3.20.20.470 178 347 1.9E-27 T 28-03-2018 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 Pfam PF12833 Helix-turn-helix domain 111 188 2.1E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 SMART SM00342 105 187 2.4E-13 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 Gene3D G3DSA:1.10.10.10 269 353 3.3E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 SUPERFAMILY SSF53155 193 268 1.9E-16 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 Gene3D G3DSA:1.10.10.60 86 145 5.1E-16 T 28-03-2018 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 Gene3D G3DSA:3.30.160.70 187 268 1.6E-22 T 28-03-2018 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 Gene3D G3DSA:1.10.10.60 146 186 0.0051 T 28-03-2018 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 Gene3D G3DSA:3.40.10.10 11 85 5.3E-24 T 28-03-2018 IPR035451 Ada-like domain CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 321 327 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 SUPERFAMILY SSF57884 13 87 6.93E-30 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 195 240 1.9E-5 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 SUPERFAMILY SSF46689 92 138 2.15E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 PIRSF PIRSF000409 2 353 4.5E-126 T 28-03-2018 IPR016221 Bifunctional regulatory protein Ada CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 Pfam PF02805 Metal binding domain of Ada 19 83 3.7E-29 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 271 350 8.4E-34 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 272 351 5.6E-31 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CJD35_RS09765 6ef455ca72587bd94a3e4cb7549925d0 353 SUPERFAMILY SSF46767 270 351 1.18E-29 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CJD35_RS04205 e8f72e766e0ae87d122e25d618235330 821 Pfam PF14403 Circularly permuted ATP-grasp type 2 84 464 1.1E-130 T 28-03-2018 IPR025841 Circularly permuted ATP-grasp type 2 CJD35_RS04205 e8f72e766e0ae87d122e25d618235330 821 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 511 805 6.3E-58 T 28-03-2018 IPR007296 Domain of unknown function DUF403 CJD35_RS04205 e8f72e766e0ae87d122e25d618235330 821 SUPERFAMILY SSF56059 62 222 3.11E-12 T 28-03-2018 CJD35_RS04205 e8f72e766e0ae87d122e25d618235330 821 SUPERFAMILY SSF56059 327 337 3.11E-12 T 28-03-2018 CJD35_RS15390 e76e72bf5a1c900466e32c4abfb3b6fc 376 Pfam PF01636 Phosphotransferase enzyme family 60 270 5.0E-17 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CJD35_RS15390 e76e72bf5a1c900466e32c4abfb3b6fc 376 Gene3D G3DSA:3.90.1200.10 120 312 3.9E-17 T 28-03-2018 CJD35_RS15390 e76e72bf5a1c900466e32c4abfb3b6fc 376 Gene3D G3DSA:3.30.200.20 10 119 3.3E-7 T 28-03-2018 CJD35_RS15390 e76e72bf5a1c900466e32c4abfb3b6fc 376 SUPERFAMILY SSF56112 25 320 5.1E-26 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS15355 9ddcd257baa40c705ffdaa42fe1b9d83 442 Gene3D G3DSA:1.20.1250.20 4 204 9.7E-31 T 28-03-2018 CJD35_RS15355 9ddcd257baa40c705ffdaa42fe1b9d83 442 Gene3D G3DSA:1.20.1250.20 206 441 2.9E-15 T 28-03-2018 CJD35_RS15355 9ddcd257baa40c705ffdaa42fe1b9d83 442 SUPERFAMILY SSF103473 5 377 4.97E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS15355 9ddcd257baa40c705ffdaa42fe1b9d83 442 SUPERFAMILY SSF103473 409 427 4.97E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS15355 9ddcd257baa40c705ffdaa42fe1b9d83 442 Pfam PF07690 Major Facilitator Superfamily 20 363 2.4E-41 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS19695 14d97f24f623576b16f61b84421edca5 164 Gene3D G3DSA:1.10.260.40 4 76 0.0013 T 28-03-2018 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 308 1.4E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 Gene3D G3DSA:3.50.50.60 108 258 1.5E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 SUPERFAMILY SSF51905 2 328 2.5E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 Pfam PF04324 BFD-like [2Fe-2S] binding domain 374 426 1.7E-9 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 1.7E-10 T 28-03-2018 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.7E-10 T 28-03-2018 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.7E-10 T 28-03-2018 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 294 312 4.9E-8 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 108 116 4.9E-8 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 4 26 4.9E-8 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 Gene3D G3DSA:3.50.50.60 1 107 1.3E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 Gene3D G3DSA:3.50.50.60 263 342 1.2E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16530 5aaa8e2196051465dc1c8d191bb38cfb 456 PIRSF PIRSF037495 1 455 3.3E-141 T 28-03-2018 IPR017224 Opine oxidase, subunit A/hydrogen cyanide synthase, subunit B GO:0016491|GO:0055114 CJD35_RS18580 ca564e5836ed2599b343f987f9338cef 293 Gene3D G3DSA:3.40.30.10 161 293 2.9E-17 T 28-03-2018 CJD35_RS18580 ca564e5836ed2599b343f987f9338cef 293 SUPERFAMILY SSF52833 157 289 1.06E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS18580 ca564e5836ed2599b343f987f9338cef 293 Pfam PF10411 Disulfide bond isomerase protein N-terminus 49 99 1.4E-15 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CJD35_RS18580 ca564e5836ed2599b343f987f9338cef 293 Gene3D G3DSA:3.10.450.70 39 100 2.7E-15 T 28-03-2018 CJD35_RS18580 ca564e5836ed2599b343f987f9338cef 293 SUPERFAMILY SSF54423 50 101 3.53E-9 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CJD35_RS18580 ca564e5836ed2599b343f987f9338cef 293 Pfam PF13098 Thioredoxin-like domain 175 288 2.5E-13 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS06290 0feb5ac5e568ac4f09a8a6fb0828caca 213 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 45 53 - T 28-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS06290 0feb5ac5e568ac4f09a8a6fb0828caca 213 SMART SM00882 7 204 7.6E-59 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS06290 0feb5ac5e568ac4f09a8a6fb0828caca 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 210 1.8E-87 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CJD35_RS06290 0feb5ac5e568ac4f09a8a6fb0828caca 213 Pfam PF01144 Coenzyme A transferase 7 202 7.0E-38 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS06290 0feb5ac5e568ac4f09a8a6fb0828caca 213 Gene3D G3DSA:3.40.1080.10 4 213 1.8E-54 T 28-03-2018 CJD35_RS06290 0feb5ac5e568ac4f09a8a6fb0828caca 213 SUPERFAMILY SSF100950 6 210 1.36E-61 T 28-03-2018 CJD35_RS09785 95127d4c51f94dd44f6deceb2029d184 220 Pfam PF10677 Protein of unknown function (DUF2490) 31 205 3.9E-29 T 28-03-2018 IPR019619 Protein of unknown function DUF2490 CJD35_RS08885 029ce6a1483b1320e03a90ce48d6fa4b 410 SUPERFAMILY SSF118215 3 404 1.44E-70 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS08885 029ce6a1483b1320e03a90ce48d6fa4b 410 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 6.5E-22 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS08885 029ce6a1483b1320e03a90ce48d6fa4b 410 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 6.5E-22 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS08885 029ce6a1483b1320e03a90ce48d6fa4b 410 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 6.5E-22 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS08885 029ce6a1483b1320e03a90ce48d6fa4b 410 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 6.5E-22 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS08885 029ce6a1483b1320e03a90ce48d6fa4b 410 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 6.5E-22 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS08885 029ce6a1483b1320e03a90ce48d6fa4b 410 PRINTS PR00173 Glutamate-aspartate symporter signature 217 236 6.5E-22 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS08885 029ce6a1483b1320e03a90ce48d6fa4b 410 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 6.5E-22 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS08885 029ce6a1483b1320e03a90ce48d6fa4b 410 Pfam PF00375 Sodium:dicarboxylate symporter family 3 404 4.4E-75 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS08885 029ce6a1483b1320e03a90ce48d6fa4b 410 Gene3D G3DSA:1.10.3860.10 1 408 2.0E-82 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CJD35_RS06925 99b6929cb1bb721214380cb93db08846 229 SUPERFAMILY SSF69118 10 228 1.17E-26 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CJD35_RS06925 99b6929cb1bb721214380cb93db08846 229 Gene3D G3DSA:1.20.1290.10 1 103 9.5E-6 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CJD35_RS06925 99b6929cb1bb721214380cb93db08846 229 Pfam PF02627 Carboxymuconolactone decarboxylase family 150 221 7.3E-8 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CJD35_RS06925 99b6929cb1bb721214380cb93db08846 229 Gene3D G3DSA:1.20.1290.10 115 229 6.0E-10 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CJD35_RS03310 5fa96c5361c02a6e925124d67ba15267 543 Pfam PF03781 Sulfatase-modifying factor enzyme 1 313 532 2.6E-44 T 28-03-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 CJD35_RS03310 5fa96c5361c02a6e925124d67ba15267 543 SUPERFAMILY SSF52129 218 283 1.74E-22 T 28-03-2018 IPR029030 Caspase-like domain CJD35_RS03310 5fa96c5361c02a6e925124d67ba15267 543 SUPERFAMILY SSF52129 35 182 1.74E-22 T 28-03-2018 IPR029030 Caspase-like domain CJD35_RS03310 5fa96c5361c02a6e925124d67ba15267 543 Gene3D G3DSA:3.90.1580.10 299 540 1.1E-52 T 28-03-2018 CJD35_RS03310 5fa96c5361c02a6e925124d67ba15267 543 Pfam PF00656 Caspase domain 39 282 3.6E-15 T 28-03-2018 CJD35_RS03310 5fa96c5361c02a6e925124d67ba15267 543 Gene3D G3DSA:3.40.50.1460 33 298 1.7E-26 T 28-03-2018 CJD35_RS03310 5fa96c5361c02a6e925124d67ba15267 543 SUPERFAMILY SSF56436 310 535 4.94E-57 T 28-03-2018 IPR016187 C-type lectin fold CJD35_RS10790 759ecb423c6859f6902c13d66c1c3b62 56 Pfam PF01695 IstB-like ATP binding protein 2 43 3.7E-15 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS11230 ccfa9d23673faf5cbdd20a09ef44e7fb 180 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 175 2.0E-41 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CJD35_RS11230 ccfa9d23673faf5cbdd20a09ef44e7fb 180 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 6 175 5.4E-56 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CJD35_RS11230 ccfa9d23673faf5cbdd20a09ef44e7fb 180 SUPERFAMILY SSF51182 1 177 8.48E-59 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS11230 ccfa9d23673faf5cbdd20a09ef44e7fb 180 Gene3D G3DSA:2.60.120.10 1 180 8.8E-57 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS08420 7271f1a50fba1a07bb07c64e7d543a34 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 240 35.46 T 28-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CJD35_RS08420 7271f1a50fba1a07bb07c64e7d543a34 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 236 5.6E-78 T 28-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CJD35_RS08420 7271f1a50fba1a07bb07c64e7d543a34 245 Pfam PF00977 Histidine biosynthesis protein 5 232 1.2E-74 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CJD35_RS08420 7271f1a50fba1a07bb07c64e7d543a34 245 Gene3D G3DSA:3.20.20.70 4 245 4.0E-55 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS08420 7271f1a50fba1a07bb07c64e7d543a34 245 SUPERFAMILY SSF51366 4 239 9.42E-70 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CJD35_RS06300 c600477c0703075d53017b2801ebf3bb 178 Pfam PF01613 Flavin reductase like domain 23 172 3.9E-34 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CJD35_RS06300 c600477c0703075d53017b2801ebf3bb 178 SMART SM00903 23 170 3.7E-52 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CJD35_RS06300 c600477c0703075d53017b2801ebf3bb 178 SUPERFAMILY SSF50475 19 171 9.32E-44 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CJD35_RS06300 c600477c0703075d53017b2801ebf3bb 178 Gene3D G3DSA:2.30.110.10 11 178 2.5E-37 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CJD35_RS15075 a0f609c27731e2f1fc2ac19227148797 340 SUPERFAMILY SSF53822 64 330 8.05E-53 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CJD35_RS15075 a0f609c27731e2f1fc2ac19227148797 340 Gene3D G3DSA:3.40.50.2300 63 180 1.2E-17 T 28-03-2018 CJD35_RS15075 a0f609c27731e2f1fc2ac19227148797 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 51 3.2E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS15075 a0f609c27731e2f1fc2ac19227148797 340 SUPERFAMILY SSF47413 6 65 5.63E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS15075 a0f609c27731e2f1fc2ac19227148797 340 Pfam PF13377 Periplasmic binding protein-like domain 181 339 7.1E-34 T 28-03-2018 CJD35_RS15075 a0f609c27731e2f1fc2ac19227148797 340 Gene3D G3DSA:1.10.260.40 21 62 2.9E-21 T 28-03-2018 CJD35_RS15075 a0f609c27731e2f1fc2ac19227148797 340 Gene3D G3DSA:1.10.10.10 1 20 0.0011 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS15075 a0f609c27731e2f1fc2ac19227148797 340 SMART SM00354 6 76 1.8E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS15075 a0f609c27731e2f1fc2ac19227148797 340 Gene3D G3DSA:3.40.50.2300 181 340 5.2E-44 T 28-03-2018 CJD35_RS08870 0bbb4488be8380fb876a5ebcb7b5f8ec 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 84 1.2E-21 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08870 0bbb4488be8380fb876a5ebcb7b5f8ec 87 Pfam PF01649 Ribosomal protein S20 2 83 6.2E-25 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08870 0bbb4488be8380fb876a5ebcb7b5f8ec 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 26 83 7.0E-16 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08870 0bbb4488be8380fb876a5ebcb7b5f8ec 87 Gene3D G3DSA:1.20.58.110 1 87 7.4E-28 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08870 0bbb4488be8380fb876a5ebcb7b5f8ec 87 SUPERFAMILY SSF46992 3 86 8.5E-27 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08870 0bbb4488be8380fb876a5ebcb7b5f8ec 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.275 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS12535 48496b4a466221c48a638b738f77427b 206 ProSitePatterns PS01081 TetR-type HTH domain signature. 33 63 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CJD35_RS12535 48496b4a466221c48a638b738f77427b 206 Gene3D G3DSA:1.10.260.40 43 69 1.1E-9 T 28-03-2018 CJD35_RS12535 48496b4a466221c48a638b738f77427b 206 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 67 4.1E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS12535 48496b4a466221c48a638b738f77427b 206 Gene3D G3DSA:1.10.357.10 70 201 2.6E-21 T 28-03-2018 CJD35_RS12535 48496b4a466221c48a638b738f77427b 206 Gene3D G3DSA:1.10.10.60 1 42 2.8E-13 T 28-03-2018 CJD35_RS12535 48496b4a466221c48a638b738f77427b 206 SUPERFAMILY SSF48498 91 203 1.06E-26 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS12535 48496b4a466221c48a638b738f77427b 206 SUPERFAMILY SSF46689 8 82 4.26E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS12535 48496b4a466221c48a638b738f77427b 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 3.5E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS12535 48496b4a466221c48a638b738f77427b 206 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 3.5E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS22035 e5997905e697953833c38abf61dd129d 183 Pfam PF00239 Resolvase, N terminal domain 4 136 6.3E-44 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS22035 e5997905e697953833c38abf61dd129d 183 SUPERFAMILY SSF46689 139 180 1.49E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS22035 e5997905e697953833c38abf61dd129d 183 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS22035 e5997905e697953833c38abf61dd129d 183 Gene3D G3DSA:1.20.5.40 106 135 4.1E-18 T 28-03-2018 CJD35_RS22035 e5997905e697953833c38abf61dd129d 183 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS22035 e5997905e697953833c38abf61dd129d 183 SUPERFAMILY SSF53041 3 135 2.35E-44 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS22035 e5997905e697953833c38abf61dd129d 183 SMART SM00857 3 137 1.2E-57 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS22035 e5997905e697953833c38abf61dd129d 183 Gene3D G3DSA:3.40.50.1390 1 105 4.9E-32 T 28-03-2018 CJD35_RS22035 e5997905e697953833c38abf61dd129d 183 Gene3D G3DSA:1.10.10.60 139 183 2.5E-8 T 28-03-2018 CJD35_RS02135 a90a268f76deae1c828788d826060fc1 602 Pfam PF05960 Bacterial protein of unknown function (DUF885) 49 595 4.2E-151 T 28-03-2018 IPR010281 Protein of unknown function DUF885 CJD35_RS10745 8ecf45219b47e89cf73d5369c0b9487a 252 Gene3D G3DSA:3.90.226.10 4 209 1.6E-54 T 28-03-2018 CJD35_RS10745 8ecf45219b47e89cf73d5369c0b9487a 252 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 250 5.3E-54 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS10745 8ecf45219b47e89cf73d5369c0b9487a 252 SUPERFAMILY SSF52096 2 250 6.47E-72 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS10745 8ecf45219b47e89cf73d5369c0b9487a 252 Gene3D G3DSA:1.10.12.10 210 244 5.1E-18 T 28-03-2018 IPR014748 Crontonase, C-terminal CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 SUPERFAMILY SSF51120 430 611 1.05E-21 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 Gene3D G3DSA:2.150.10.10 612 811 4.6E-20 T 28-03-2018 CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 SUPERFAMILY SSF51120 631 800 3.79E-20 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 SUPERFAMILY SSF51126 10 342 1.27E-35 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 SMART SM00710 157 179 250.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 SMART SM00710 134 156 110.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 SMART SM00710 206 228 0.21 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 SMART SM00710 104 125 1600.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 SMART SM00710 245 267 1400.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 SMART SM00710 180 204 620.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 Gene3D G3DSA:2.160.20.10 14 360 4.4E-36 T 28-03-2018 IPR012334 Pectin lyase fold CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 Pfam PF13229 Right handed beta helix region 103 230 1.6E-9 T 28-03-2018 CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 714 735 3.7E-5 T 28-03-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 PRINTS PR01488 Gram-negative bacterial RTX toxin determinant A family signature 275 296 3.7E-5 T 28-03-2018 IPR003995 RTX toxin determinant A GO:0005509|GO:0005576|GO:0009405 CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 PRINTS PR00313 NodO calcium binding signature 510 518 1.6E-7 T 28-03-2018 CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 PRINTS PR00313 NodO calcium binding signature 528 537 1.6E-7 T 28-03-2018 CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 PRINTS PR00313 NodO calcium binding signature 442 453 1.6E-7 T 28-03-2018 CJD35_RS04505 f2f5ebe757711b9d56cce4c712f0aec7 815 PRINTS PR00313 NodO calcium binding signature 519 527 1.6E-7 T 28-03-2018 CJD35_RS05500 c335539a4e0b414e52ea9d9caa52b073 78 SUPERFAMILY SSF52833 2 76 6.99E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS05500 c335539a4e0b414e52ea9d9caa52b073 78 Pfam PF13192 Thioredoxin domain 3 77 4.2E-26 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS05500 c335539a4e0b414e52ea9d9caa52b073 78 Gene3D G3DSA:3.40.30.10 1 77 1.6E-14 T 28-03-2018 CJD35_RS05500 c335539a4e0b414e52ea9d9caa52b073 78 PIRSF PIRSF037031 1 78 1.3E-30 T 28-03-2018 IPR005243 Redox-active disulphide protein 2 CJD35_RS05500 c335539a4e0b414e52ea9d9caa52b073 78 TIGRFAM TIGR00412 redox_disulf_2: redox-active disulfide protein 2 1 76 2.8E-22 T 28-03-2018 IPR005243 Redox-active disulphide protein 2 CJD35_RS09985 6e7ba1dab6d1a7e480564805299c2796 300 Gene3D G3DSA:3.40.50.10330 4 139 2.0E-23 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CJD35_RS09985 6e7ba1dab6d1a7e480564805299c2796 300 Pfam PF00781 Diacylglycerol kinase catalytic domain 12 131 9.1E-22 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CJD35_RS09985 6e7ba1dab6d1a7e480564805299c2796 300 SMART SM00046 11 135 4.7E-4 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CJD35_RS09985 6e7ba1dab6d1a7e480564805299c2796 300 SUPERFAMILY SSF111331 9 299 6.76E-56 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CJD35_RS07895 6a6f506a53472e88a2ab246325741767 124 SUPERFAMILY SSF50156 40 111 1.06E-9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS07895 6a6f506a53472e88a2ab246325741767 124 Gene3D G3DSA:2.30.42.10 30 113 1.3E-9 T 28-03-2018 CJD35_RS07895 6a6f506a53472e88a2ab246325741767 124 SMART SM00228 38 108 2.6E-6 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS07895 6a6f506a53472e88a2ab246325741767 124 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 38 86 3.2E-7 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 1.2E-24 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 183 354 1.5E-20 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 SUPERFAMILY SSF52540 3 169 1.99E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 PIRSF PIRSF006485 1 454 3.5E-154 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 Pfam PF01926 50S ribosome-binding GTPase 186 308 7.1E-19 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 Pfam PF01926 50S ribosome-binding GTPase 5 120 6.3E-28 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 Hamap MF_00195 GTPase Der [der]. 2 449 36.077 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 Gene3D G3DSA:1.20.120.430 2 67 4.7E-17 T 28-03-2018 CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 Gene3D G3DSA:1.20.120.430 68 243 1.8E-42 T 28-03-2018 CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 SUPERFAMILY SSF52540 138 452 2.89E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 Gene3D G3DSA:3.40.50.300 244 362 3.5E-12 T 28-03-2018 CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 Gene3D G3DSA:3.30.300.20 363 447 1.3E-31 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 446 5.4E-158 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CJD35_RS09650 df54ff0378f9064cebeb1f0f664c6839 454 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 366 446 8.9E-29 T 28-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 Gene3D G3DSA:3.50.50.60 46 215 1.2E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 46 434 7.4E-194 T 28-03-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 195 210 3.9E-26 T 28-03-2018 CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 337 3.9E-26 T 28-03-2018 CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 337 353 3.9E-26 T 28-03-2018 CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 49 71 3.9E-26 T 28-03-2018 CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 Pfam PF01494 FAD binding domain 47 387 1.4E-81 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 Gene3D G3DSA:3.30.9.10 216 331 3.0E-48 T 28-03-2018 CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 Gene3D G3DSA:3.30.9.10 362 432 8.8E-15 T 28-03-2018 CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 SUPERFAMILY SSF51905 318 432 1.3E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 SUPERFAMILY SSF51905 46 216 1.3E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS16860 e0b2344ff860fa410459b46554c9f681 434 SUPERFAMILY SSF54373 220 319 7.45E-45 T 28-03-2018 CJD35_RS14730 2ff688450f55db1834b25efb591dada8 583 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CJD35_RS14730 2ff688450f55db1834b25efb591dada8 583 SUPERFAMILY SSF52518 371 571 1.5E-68 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS14730 2ff688450f55db1834b25efb591dada8 583 SUPERFAMILY SSF52518 4 185 4.96E-66 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS14730 2ff688450f55db1834b25efb591dada8 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 169 5.8E-59 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CJD35_RS14730 2ff688450f55db1834b25efb591dada8 583 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 565 9.0E-235 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CJD35_RS14730 2ff688450f55db1834b25efb591dada8 583 Gene3D G3DSA:3.40.50.1220 190 350 5.5E-52 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS14730 2ff688450f55db1834b25efb591dada8 583 Gene3D G3DSA:3.40.50.970 351 555 6.2E-55 T 28-03-2018 CJD35_RS14730 2ff688450f55db1834b25efb591dada8 583 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 329 3.0E-42 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CJD35_RS14730 2ff688450f55db1834b25efb591dada8 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 543 1.8E-50 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CJD35_RS14730 2ff688450f55db1834b25efb591dada8 583 Gene3D G3DSA:3.40.50.970 2 189 4.2E-65 T 28-03-2018 CJD35_RS14730 2ff688450f55db1834b25efb591dada8 583 SUPERFAMILY SSF52467 187 359 4.24E-61 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS08325 1029c69de98bf1708d554e1c2244b901 246 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 90 3.7E-6 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CJD35_RS08325 1029c69de98bf1708d554e1c2244b901 246 Gene3D G3DSA:3.30.70.1400 10 186 3.7E-24 T 28-03-2018 CJD35_RS08325 1029c69de98bf1708d554e1c2244b901 246 PIRSF PIRSF006487 131 215 62.0 T 28-03-2018 CJD35_RS08325 1029c69de98bf1708d554e1c2244b901 246 PIRSF PIRSF006487 4 101 1.4E-6 T 28-03-2018 CJD35_RS08325 1029c69de98bf1708d554e1c2244b901 246 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 133 197 5.9E-21 T 28-03-2018 IPR017703 YgfZ/GcvT conserved site CJD35_RS08325 1029c69de98bf1708d554e1c2244b901 246 SUPERFAMILY SSF103025 5 187 1.33E-46 T 28-03-2018 CJD35_RS12145 7ad608e154f0daa2f0a8fba156924183 261 Gene3D G3DSA:1.20.120.220 84 261 1.3E-40 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12145 7ad608e154f0daa2f0a8fba156924183 261 Hamap MF_01393 ATP synthase subunit a [atpB]. 11 261 15.022 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12145 7ad608e154f0daa2f0a8fba156924183 261 SUPERFAMILY SSF81336 84 255 1.57E-40 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12145 7ad608e154f0daa2f0a8fba156924183 261 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 11 257 3.7E-58 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12145 7ad608e154f0daa2f0a8fba156924183 261 Pfam PF00119 ATP synthase A chain 39 254 1.8E-50 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12145 7ad608e154f0daa2f0a8fba156924183 261 PRINTS PR00123 ATP synthase A subunit signature 241 256 2.8E-27 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12145 7ad608e154f0daa2f0a8fba156924183 261 PRINTS PR00123 ATP synthase A subunit signature 180 202 2.8E-27 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12145 7ad608e154f0daa2f0a8fba156924183 261 PRINTS PR00123 ATP synthase A subunit signature 160 175 2.8E-27 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12145 7ad608e154f0daa2f0a8fba156924183 261 PRINTS PR00123 ATP synthase A subunit signature 93 109 2.8E-27 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS15845 a4796795a6413da47389e10ec4d4ecdc 85 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 11 80 7.8E-9 T 28-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 CJD35_RS18650 d6df00f10cebbf94a1dfbff8ef7e253a 938 Pfam PF07916 TraG-like protein, N-terminal region 3 459 5.5E-114 T 28-03-2018 IPR012931 TraG-like, N-terminal CJD35_RS14470 6e5b40d452a8e31975f9b09ca600c558 705 Hamap MF_00641 Malate synthase G [glcB]. 1 705 362.373 T 28-03-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CJD35_RS14470 6e5b40d452a8e31975f9b09ca600c558 705 Gene3D G3DSA:3.20.20.360 201 565 1.9E-100 T 28-03-2018 CJD35_RS14470 6e5b40d452a8e31975f9b09ca600c558 705 Gene3D G3DSA:3.20.20.360 91 196 5.0E-16 T 28-03-2018 CJD35_RS14470 6e5b40d452a8e31975f9b09ca600c558 705 Pfam PF01274 Malate synthase 21 673 7.3E-164 T 28-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CJD35_RS14470 6e5b40d452a8e31975f9b09ca600c558 705 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 7 699 0.0 T 28-03-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CJD35_RS14470 6e5b40d452a8e31975f9b09ca600c558 705 SUPERFAMILY SSF51645 6 699 1.57E-283 T 28-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CJD35_RS14470 6e5b40d452a8e31975f9b09ca600c558 705 Gene3D G3DSA:1.10.1860.10 2 90 4.0E-33 T 28-03-2018 CJD35_RS14470 6e5b40d452a8e31975f9b09ca600c558 705 Gene3D G3DSA:1.20.1220.12 566 704 4.7E-42 T 28-03-2018 CJD35_RS21850 defdaff9a23c41453a45e7fb7e848170 229 Pfam PF13362 Toprim domain 139 225 4.7E-14 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS21850 defdaff9a23c41453a45e7fb7e848170 229 Gene3D G3DSA:3.40.1360.10 134 228 3.5E-5 T 28-03-2018 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 11 1363 18.645 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 SUPERFAMILY SSF64484 1120 1349 0.0 T 28-03-2018 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 SUPERFAMILY SSF64484 16 939 0.0 T 28-03-2018 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Gene3D G3DSA:2.40.50.100 1148 1200 2.0E-14 T 28-03-2018 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 343 3.2E-89 T 28-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1350 0.0 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Gene3D G3DSA:2.40.40.20 347 489 4.3E-40 T 28-03-2018 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 486 5.2E-27 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Pfam PF00623 RNA polymerase Rpb1, domain 2 345 392 7.4E-8 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Gene3D G3DSA:2.40.50.100 1103 1147 0.0012 T 28-03-2018 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Pfam PF05000 RNA polymerase Rpb1, domain 4 672 758 9.0E-17 T 28-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Pfam PF04983 RNA polymerase Rpb1, domain 3 490 643 6.4E-26 T 28-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 SMART SM00663 236 515 9.7E-181 T 28-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Gene3D G3DSA:2.40.50.100 902 1016 1.4E-29 T 28-03-2018 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Gene3D G3DSA:2.40.50.100 1019 1102 1.9E-14 T 28-03-2018 CJD35_RS01825 6485246800061e25fdc354f382e262a4 1418 Pfam PF04998 RNA polymerase Rpb1, domain 5 762 1301 1.2E-72 T 28-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS16205 42707b9c8078c5ea329b2b1e07cd2029 113 Gene3D G3DSA:3.40.50.300 6 100 0.001 T 28-03-2018 CJD35_RS16205 42707b9c8078c5ea329b2b1e07cd2029 113 Pfam PF01695 IstB-like ATP binding protein 6 100 9.0E-30 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS16205 42707b9c8078c5ea329b2b1e07cd2029 113 SUPERFAMILY SSF52540 20 103 4.43E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS16605 fa4e3c22fe6e4feb2b97d809a70a2c1b 382 Pfam PF07687 Peptidase dimerisation domain 183 276 4.5E-11 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS16605 fa4e3c22fe6e4feb2b97d809a70a2c1b 382 SUPERFAMILY SSF53187 295 380 1.49E-82 T 28-03-2018 CJD35_RS16605 fa4e3c22fe6e4feb2b97d809a70a2c1b 382 SUPERFAMILY SSF53187 4 194 1.49E-82 T 28-03-2018 CJD35_RS16605 fa4e3c22fe6e4feb2b97d809a70a2c1b 382 PIRSF PIRSF005962 2 382 5.9E-124 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 CJD35_RS16605 fa4e3c22fe6e4feb2b97d809a70a2c1b 382 Pfam PF01546 Peptidase family M20/M25/M40 70 377 1.1E-33 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CJD35_RS16605 fa4e3c22fe6e4feb2b97d809a70a2c1b 382 SUPERFAMILY SSF55031 181 293 7.85E-30 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS16605 fa4e3c22fe6e4feb2b97d809a70a2c1b 382 Gene3D G3DSA:3.40.630.10 2 245 3.1E-49 T 28-03-2018 CJD35_RS16605 fa4e3c22fe6e4feb2b97d809a70a2c1b 382 Gene3D G3DSA:3.40.630.10 246 381 3.0E-20 T 28-03-2018 CJD35_RS16605 fa4e3c22fe6e4feb2b97d809a70a2c1b 382 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 12 367 1.9E-107 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 CJD35_RS02185 1adb46e9c47102d24cc982379e062ee8 337 SUPERFAMILY SSF51412 14 332 1.68E-50 T 28-03-2018 CJD35_RS02185 1adb46e9c47102d24cc982379e062ee8 337 Gene3D G3DSA:3.20.20.70 13 337 1.6E-50 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS02185 1adb46e9c47102d24cc982379e062ee8 337 Pfam PF03060 Nitronate monooxygenase 89 326 8.2E-34 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CJD35_RS03085 739d7fd673c34a35b2d319bb222a0e25 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 40 55 4.6E-15 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CJD35_RS03085 739d7fd673c34a35b2d319bb222a0e25 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 19 40 4.6E-15 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CJD35_RS03085 739d7fd673c34a35b2d319bb222a0e25 90 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 55 77 4.6E-15 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CJD35_RS03085 739d7fd673c34a35b2d319bb222a0e25 90 Pfam PF01313 Bacterial export proteins, family 3 7 79 1.9E-25 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CJD35_RS03085 739d7fd673c34a35b2d319bb222a0e25 90 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 4 88 1.8E-28 T 28-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CJD35_RS03085 739d7fd673c34a35b2d319bb222a0e25 90 PIRSF PIRSF004669 2 90 1.9E-30 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CJD35_RS07035 31e92b8832d4f539d59a47706e28cce3 249 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 85 226 1.8E-19 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CJD35_RS07035 31e92b8832d4f539d59a47706e28cce3 249 Gene3D G3DSA:3.40.50.1110 39 238 6.9E-26 T 28-03-2018 CJD35_RS07035 31e92b8832d4f539d59a47706e28cce3 249 SUPERFAMILY SSF52266 42 235 3.21E-39 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CJD35_RS02850 99c2f391591786abd23643c377282bb6 262 Pfam PF01841 Transglutaminase-like superfamily 132 216 1.8E-19 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS02850 99c2f391591786abd23643c377282bb6 262 Gene3D G3DSA:3.90.260.10 129 198 1.8E-5 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS02850 99c2f391591786abd23643c377282bb6 262 SUPERFAMILY SSF54001 81 244 4.35E-30 T 28-03-2018 CJD35_RS02850 99c2f391591786abd23643c377282bb6 262 SMART SM00460 159 219 1.3E-12 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS14875 32e6f333f4ee2445c395cbb876c37da8 129 Gene3D G3DSA:3.40.960.10 19 120 1.2E-23 T 28-03-2018 CJD35_RS14875 32e6f333f4ee2445c395cbb876c37da8 129 Pfam PF04480 Protein of unknown function (DUF559) 9 111 3.2E-36 T 28-03-2018 IPR007569 Domain of unknown function DUF559 CJD35_RS14875 32e6f333f4ee2445c395cbb876c37da8 129 SUPERFAMILY SSF52980 10 114 1.23E-19 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CJD35_RS17340 28157b6b6369c13499bfec6b90862469 426 Gene3D G3DSA:3.40.50.2000 227 388 1.3E-31 T 28-03-2018 CJD35_RS17340 28157b6b6369c13499bfec6b90862469 426 Pfam PF13439 Glycosyltransferase Family 4 45 210 2.9E-19 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS17340 28157b6b6369c13499bfec6b90862469 426 SUPERFAMILY SSF53756 35 398 2.36E-67 T 28-03-2018 CJD35_RS17340 28157b6b6369c13499bfec6b90862469 426 Gene3D G3DSA:3.40.50.2000 30 226 9.7E-17 T 28-03-2018 CJD35_RS17340 28157b6b6369c13499bfec6b90862469 426 Pfam PF00534 Glycosyl transferases group 1 231 380 1.1E-23 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CJD35_RS13375 b7e94b8fa3a63c2ebc3c875f5f0f4ada 236 SUPERFAMILY SSF53335 40 207 3.55E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS13375 b7e94b8fa3a63c2ebc3c875f5f0f4ada 236 Gene3D G3DSA:3.40.50.150 39 236 3.6E-26 T 28-03-2018 CJD35_RS13375 b7e94b8fa3a63c2ebc3c875f5f0f4ada 236 Pfam PF01564 Spermine/spermidine synthase domain 77 191 1.8E-7 T 28-03-2018 CJD35_RS01320 e34dab7d444221700bd67a2f470d7406 615 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 7.1E-247 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CJD35_RS01320 e34dab7d444221700bd67a2f470d7406 615 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CJD35_RS01320 e34dab7d444221700bd67a2f470d7406 615 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 44.666 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CJD35_RS01320 e34dab7d444221700bd67a2f470d7406 615 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CJD35_RS01320 e34dab7d444221700bd67a2f470d7406 615 SUPERFAMILY SSF52016 421 612 3.92E-59 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJD35_RS01320 e34dab7d444221700bd67a2f470d7406 615 Gene3D G3DSA:3.40.50.2300 87 363 0.0026 T 28-03-2018 CJD35_RS01320 e34dab7d444221700bd67a2f470d7406 615 SUPERFAMILY SSF143975 4 420 2.75E-134 T 28-03-2018 CJD35_RS01320 e34dab7d444221700bd67a2f470d7406 615 Pfam PF00920 Dehydratase family 34 607 2.3E-218 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CJD35_RS07020 7d240a8bb1df0a4181e8a1bd9c79257d 927 Gene3D G3DSA:2.170.130.10 98 238 3.4E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS07020 7d240a8bb1df0a4181e8a1bd9c79257d 927 Gene3D G3DSA:2.40.170.20 245 927 6.5E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07020 7d240a8bb1df0a4181e8a1bd9c79257d 927 Gene3D G3DSA:2.60.40.1120 27 97 1.6E-10 T 28-03-2018 CJD35_RS07020 7d240a8bb1df0a4181e8a1bd9c79257d 927 SUPERFAMILY SSF49452 25 101 9.22E-11 T 28-03-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 CJD35_RS07020 7d240a8bb1df0a4181e8a1bd9c79257d 927 Pfam PF13620 Carboxypeptidase regulatory-like domain 27 102 4.0E-9 T 28-03-2018 CJD35_RS07020 7d240a8bb1df0a4181e8a1bd9c79257d 927 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 230 5.6E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS07020 7d240a8bb1df0a4181e8a1bd9c79257d 927 Pfam PF00593 TonB dependent receptor 451 904 3.4E-30 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS07020 7d240a8bb1df0a4181e8a1bd9c79257d 927 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 110 927 2.3E-171 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor CJD35_RS07020 7d240a8bb1df0a4181e8a1bd9c79257d 927 SUPERFAMILY SSF56935 111 451 2.29E-89 T 28-03-2018 CJD35_RS07020 7d240a8bb1df0a4181e8a1bd9c79257d 927 SUPERFAMILY SSF56935 563 927 2.29E-89 T 28-03-2018 CJD35_RS07020 7d240a8bb1df0a4181e8a1bd9c79257d 927 SUPERFAMILY SSF56935 488 526 2.29E-89 T 28-03-2018 CJD35_RS11950 92731ac597ddac7a3f5d3d64fa062338 495 Pfam PF03796 DnaB-like helicase C terminal domain 196 483 9.2E-101 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CJD35_RS11950 92731ac597ddac7a3f5d3d64fa062338 495 SUPERFAMILY SSF52540 194 423 5.68E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS11950 92731ac597ddac7a3f5d3d64fa062338 495 SUPERFAMILY SSF52540 450 475 5.68E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS11950 92731ac597ddac7a3f5d3d64fa062338 495 SMART SM00382 213 425 0.0019 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS11950 92731ac597ddac7a3f5d3d64fa062338 495 SUPERFAMILY SSF48024 17 127 4.71E-28 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CJD35_RS11950 92731ac597ddac7a3f5d3d64fa062338 495 Gene3D G3DSA:3.40.50.300 178 493 5.0E-67 T 28-03-2018 CJD35_RS11950 92731ac597ddac7a3f5d3d64fa062338 495 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 19 485 1.0E-146 T 28-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CJD35_RS11950 92731ac597ddac7a3f5d3d64fa062338 495 Pfam PF00772 DnaB-like helicase N terminal domain 18 118 4.2E-22 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CJD35_RS11950 92731ac597ddac7a3f5d3d64fa062338 495 Gene3D G3DSA:1.10.860.10 8 161 1.1E-30 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CJD35_RS00185 fd560d0a1b4e6d4b58ca96727cee5eb2 302 Pfam PF00877 NlpC/P60 family 192 271 5.1E-17 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CJD35_RS00185 fd560d0a1b4e6d4b58ca96727cee5eb2 302 Gene3D G3DSA:3.90.1720.10 177 300 5.4E-26 T 28-03-2018 CJD35_RS00185 fd560d0a1b4e6d4b58ca96727cee5eb2 302 SUPERFAMILY SSF54001 170 286 9.22E-33 T 28-03-2018 CJD35_RS00185 fd560d0a1b4e6d4b58ca96727cee5eb2 302 Gene3D G3DSA:2.30.30.40 60 124 3.8E-6 T 28-03-2018 CJD35_RS21825 da17ecbcad3eb774f74fd59a408fa486 101 Pfam PF01381 Helix-turn-helix 6 57 2.1E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS21825 da17ecbcad3eb774f74fd59a408fa486 101 Gene3D G3DSA:1.10.260.40 1 82 1.1E-16 T 28-03-2018 CJD35_RS21825 da17ecbcad3eb774f74fd59a408fa486 101 SMART SM00530 5 60 1.3E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS21825 da17ecbcad3eb774f74fd59a408fa486 101 SUPERFAMILY SSF47413 2 65 9.65E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS18835 6a4b71be79cd84baf150839a522dba33 398 Gene3D G3DSA:3.30.70.270 214 381 7.8E-47 T 28-03-2018 CJD35_RS18835 6a4b71be79cd84baf150839a522dba33 398 SMART SM00267 211 378 4.9E-45 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18835 6a4b71be79cd84baf150839a522dba33 398 SUPERFAMILY SSF55073 226 376 1.18E-40 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS18835 6a4b71be79cd84baf150839a522dba33 398 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 220 377 2.8E-36 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS18835 6a4b71be79cd84baf150839a522dba33 398 Pfam PF00990 Diguanylate cyclase, GGDEF domain 221 374 2.1E-38 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS08310 72f4a3c7953f4e12d2dc5f77dd697b09 466 Gene3D G3DSA:3.40.50.1100 106 204 6.0E-15 T 28-03-2018 CJD35_RS08310 72f4a3c7953f4e12d2dc5f77dd697b09 466 Gene3D G3DSA:3.90.1380.10 1 86 2.3E-28 T 28-03-2018 IPR029144 Threonine synthase, N-terminal CJD35_RS08310 72f4a3c7953f4e12d2dc5f77dd697b09 466 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 96 410 4.7E-19 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS08310 72f4a3c7953f4e12d2dc5f77dd697b09 466 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 102 116 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CJD35_RS08310 72f4a3c7953f4e12d2dc5f77dd697b09 466 Gene3D G3DSA:3.40.50.1100 205 430 1.1E-76 T 28-03-2018 CJD35_RS08310 72f4a3c7953f4e12d2dc5f77dd697b09 466 TIGRFAM TIGR00260 thrC: threonine synthase 69 426 1.9E-76 T 28-03-2018 IPR004450 Threonine synthase-like CJD35_RS08310 72f4a3c7953f4e12d2dc5f77dd697b09 466 Pfam PF14821 Threonine synthase N terminus 2 80 1.2E-26 T 28-03-2018 IPR029144 Threonine synthase, N-terminal CJD35_RS08310 72f4a3c7953f4e12d2dc5f77dd697b09 466 SUPERFAMILY SSF53686 1 461 5.25E-156 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS01260 eb01e0e67458be5d731fcc5c516be9a0 78 SUPERFAMILY SSF55331 2 61 1.83E-16 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily CJD35_RS01260 eb01e0e67458be5d731fcc5c516be9a0 78 Pfam PF01361 Tautomerase enzyme 2 60 9.2E-15 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CJD35_RS01260 eb01e0e67458be5d731fcc5c516be9a0 78 Gene3D G3DSA:3.30.429.10 1 75 1.8E-17 T 28-03-2018 CJD35_RS10145 43ac0cb2d13e605743ea07058baeb815 245 Gene3D G3DSA:3.10.290.10 1 62 4.2E-17 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS10145 43ac0cb2d13e605743ea07058baeb815 245 Pfam PF01479 S4 domain 5 49 2.7E-5 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS10145 43ac0cb2d13e605743ea07058baeb815 245 SMART SM00363 4 66 0.0028 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS10145 43ac0cb2d13e605743ea07058baeb815 245 SUPERFAMILY SSF55174 3 68 3.53E-11 T 28-03-2018 CJD35_RS10145 43ac0cb2d13e605743ea07058baeb815 245 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 236 4.8E-67 T 28-03-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 CJD35_RS10145 43ac0cb2d13e605743ea07058baeb815 245 Gene3D G3DSA:3.40.50.150 63 244 2.1E-53 T 28-03-2018 CJD35_RS10145 43ac0cb2d13e605743ea07058baeb815 245 Pfam PF01728 FtsJ-like methyltransferase 60 240 2.5E-19 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CJD35_RS10145 43ac0cb2d13e605743ea07058baeb815 245 SUPERFAMILY SSF53335 59 241 4.26E-22 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS10145 43ac0cb2d13e605743ea07058baeb815 245 PIRSF PIRSF005578 1 245 4.8E-96 T 28-03-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 CJD35_RS02055 ab16352b7ffb9d20af6d944902d9971c 348 Pfam PF01628 HrcA protein C terminal domain 111 333 4.4E-52 T 28-03-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 CJD35_RS02055 ab16352b7ffb9d20af6d944902d9971c 348 Gene3D G3DSA:3.30.450.40 190 348 7.8E-40 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS02055 ab16352b7ffb9d20af6d944902d9971c 348 Gene3D G3DSA:1.10.10.10 3 92 1.9E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02055 ab16352b7ffb9d20af6d944902d9971c 348 SUPERFAMILY SSF55781 80 347 7.85E-51 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS02055 ab16352b7ffb9d20af6d944902d9971c 348 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 11 346 1.1E-85 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CJD35_RS02055 ab16352b7ffb9d20af6d944902d9971c 348 PIRSF PIRSF005485 7 348 4.9E-101 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CJD35_RS02055 ab16352b7ffb9d20af6d944902d9971c 348 SUPERFAMILY SSF46785 9 88 3.89E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02055 ab16352b7ffb9d20af6d944902d9971c 348 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 9 340 26.754 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 CJD35_RS06065 75136726d6fcbdfad1716282c2f3740f 250 SUPERFAMILY SSF101960 34 247 1.2E-58 T 28-03-2018 CJD35_RS06065 75136726d6fcbdfad1716282c2f3740f 250 Pfam PF01458 Uncharacterized protein family (UPF0051) 34 221 1.2E-49 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CJD35_RS16995 e89db94e0edec040b645de39f1d388e0 193 Pfam PF00072 Response regulator receiver domain 3 100 1.6E-7 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS16995 e89db94e0edec040b645de39f1d388e0 193 PIRSF PIRSF036382 1 190 8.7E-60 T 28-03-2018 IPR008327 Signal transduction response regulator, antiterminator CJD35_RS16995 e89db94e0edec040b645de39f1d388e0 193 Gene3D G3DSA:1.10.10.10 136 185 1.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16995 e89db94e0edec040b645de39f1d388e0 193 SMART SM00448 1 112 0.0082 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS16995 e89db94e0edec040b645de39f1d388e0 193 Gene3D G3DSA:3.40.50.2300 1 135 1.4E-14 T 28-03-2018 CJD35_RS16995 e89db94e0edec040b645de39f1d388e0 193 SUPERFAMILY SSF52172 1 183 1.39E-45 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS16995 e89db94e0edec040b645de39f1d388e0 193 SMART SM01012 128 183 4.4E-22 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 CJD35_RS16995 e89db94e0edec040b645de39f1d388e0 193 Pfam PF03861 ANTAR domain 131 183 4.3E-18 T 28-03-2018 IPR005561 ANTAR domain GO:0003723 CJD35_RS03530 53ce6ef0b2a18bcd97026a7ca8a7c855 643 SUPERFAMILY SSF48168 47 123 3.01E-16 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CJD35_RS03530 53ce6ef0b2a18bcd97026a7ca8a7c855 643 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 60 123 5.2E-14 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CJD35_RS03530 53ce6ef0b2a18bcd97026a7ca8a7c855 643 SUPERFAMILY SSF51998 535 606 2.62E-135 T 28-03-2018 CJD35_RS03530 53ce6ef0b2a18bcd97026a7ca8a7c855 643 SUPERFAMILY SSF51998 126 504 2.62E-135 T 28-03-2018 CJD35_RS03530 53ce6ef0b2a18bcd97026a7ca8a7c855 643 Pfam PF02867 Ribonucleotide reductase, barrel domain 456 601 1.7E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CJD35_RS03530 53ce6ef0b2a18bcd97026a7ca8a7c855 643 Pfam PF02867 Ribonucleotide reductase, barrel domain 128 447 8.8E-72 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CJD35_RS03530 53ce6ef0b2a18bcd97026a7ca8a7c855 643 Gene3D G3DSA:3.20.70.20 38 609 1.3E-158 T 28-03-2018 CJD35_RS03530 53ce6ef0b2a18bcd97026a7ca8a7c855 643 PRINTS PR01183 Ribonucleotide reductase large chain signature 391 413 9.1E-16 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CJD35_RS03530 53ce6ef0b2a18bcd97026a7ca8a7c855 643 PRINTS PR01183 Ribonucleotide reductase large chain signature 454 481 9.1E-16 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CJD35_RS03530 53ce6ef0b2a18bcd97026a7ca8a7c855 643 PRINTS PR01183 Ribonucleotide reductase large chain signature 312 323 9.1E-16 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CJD35_RS03530 53ce6ef0b2a18bcd97026a7ca8a7c855 643 PRINTS PR01183 Ribonucleotide reductase large chain signature 201 220 9.1E-16 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CJD35_RS11805 abd021f962dc4c885e600480204abd6d 272 PIRSF PIRSF037208 3 253 1.2E-75 T 28-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 CJD35_RS11805 abd021f962dc4c885e600480204abd6d 272 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 106 234 5.0E-28 T 28-03-2018 IPR007472 Arginine-tRNA-protein transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 CJD35_RS11805 abd021f962dc4c885e600480204abd6d 272 Hamap MF_00689 Putative arginyl-tRNA--protein transferase [ate]. 1 243 40.762 T 28-03-2018 IPR017138 Putative arginyl-tRNA--protein transferase, prokaryotic MetaCyc: PWY-7799 CJD35_RS11805 abd021f962dc4c885e600480204abd6d 272 SUPERFAMILY SSF55729 80 241 1.02E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS11805 abd021f962dc4c885e600480204abd6d 272 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 3.8E-15 T 28-03-2018 IPR007471 Arginine-tRNA-protein transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7799 CJD35_RS11805 abd021f962dc4c885e600480204abd6d 272 Gene3D G3DSA:3.40.630.30 72 234 7.1E-7 T 28-03-2018 CJD35_RS07420 c2992a4920c62cd58bbe85b4a9f33231 226 Gene3D G3DSA:1.10.10.10 1 77 8.6E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07420 c2992a4920c62cd58bbe85b4a9f33231 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 7.2E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS07420 c2992a4920c62cd58bbe85b4a9f33231 226 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 7.2E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS07420 c2992a4920c62cd58bbe85b4a9f33231 226 Gene3D G3DSA:1.20.120.530 80 225 2.3E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CJD35_RS07420 c2992a4920c62cd58bbe85b4a9f33231 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 64 1.6E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS07420 c2992a4920c62cd58bbe85b4a9f33231 226 SUPERFAMILY SSF48008 90 219 2.88E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CJD35_RS07420 c2992a4920c62cd58bbe85b4a9f33231 226 SUPERFAMILY SSF46785 3 68 3.05E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS07420 c2992a4920c62cd58bbe85b4a9f33231 226 SMART SM00345 5 64 3.8E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS07420 c2992a4920c62cd58bbe85b4a9f33231 226 Pfam PF07729 FCD domain 93 210 5.6E-21 T 28-03-2018 IPR011711 GntR, C-terminal CJD35_RS07420 c2992a4920c62cd58bbe85b4a9f33231 226 SMART SM00895 93 215 2.0E-21 T 28-03-2018 IPR011711 GntR, C-terminal CJD35_RS17920 0153fe19a3494f3dc8955cd724d8f8c2 226 Gene3D G3DSA:1.20.120.530 93 217 4.0E-7 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CJD35_RS17920 0153fe19a3494f3dc8955cd724d8f8c2 226 Gene3D G3DSA:1.10.10.10 2 79 1.9E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS16315 3b6dde473106a69a85fb690df343bdd0 137 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 54 129 1.6E-12 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS16315 3b6dde473106a69a85fb690df343bdd0 137 SUPERFAMILY SSF46626 1 131 4.3E-16 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS16315 3b6dde473106a69a85fb690df343bdd0 137 Gene3D G3DSA:1.10.760.10 16 137 6.5E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS15955 65a26fa4f908b764ce1ad636aeb9b79e 540 PIRSF PIRSF000137 1 539 1.2E-136 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS15955 65a26fa4f908b764ce1ad636aeb9b79e 540 Pfam PF05199 GMC oxidoreductase 391 527 2.2E-37 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS15955 65a26fa4f908b764ce1ad636aeb9b79e 540 Gene3D G3DSA:4.10.450.10 38 104 5.2E-18 T 28-03-2018 CJD35_RS15955 65a26fa4f908b764ce1ad636aeb9b79e 540 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS15955 65a26fa4f908b764ce1ad636aeb9b79e 540 SUPERFAMILY SSF51905 5 291 2.59E-74 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15955 65a26fa4f908b764ce1ad636aeb9b79e 540 SUPERFAMILY SSF51905 476 533 2.59E-74 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15955 65a26fa4f908b764ce1ad636aeb9b79e 540 Pfam PF00732 GMC oxidoreductase 6 297 2.6E-69 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS15955 65a26fa4f908b764ce1ad636aeb9b79e 540 Gene3D G3DSA:3.30.560.10 105 489 3.7E-82 T 28-03-2018 CJD35_RS15955 65a26fa4f908b764ce1ad636aeb9b79e 540 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 257 271 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CJD35_RS15955 65a26fa4f908b764ce1ad636aeb9b79e 540 SUPERFAMILY SSF54373 293 477 2.26E-38 T 28-03-2018 CJD35_RS00660 4f6f333e53e2982510b5c6a451235bfc 314 Gene3D G3DSA:3.10.580.10 68 216 5.3E-29 T 28-03-2018 CJD35_RS00660 4f6f333e53e2982510b5c6a451235bfc 314 Pfam PF03471 Transporter associated domain 226 304 1.6E-16 T 28-03-2018 IPR005170 Transporter-associated domain CJD35_RS00660 4f6f333e53e2982510b5c6a451235bfc 314 SUPERFAMILY SSF54631 82 220 7.83E-30 T 28-03-2018 CJD35_RS00660 4f6f333e53e2982510b5c6a451235bfc 314 Pfam PF00571 CBS domain 159 208 1.3E-4 T 28-03-2018 IPR000644 CBS domain CJD35_RS00660 4f6f333e53e2982510b5c6a451235bfc 314 Pfam PF00571 CBS domain 92 144 2.1E-5 T 28-03-2018 IPR000644 CBS domain CJD35_RS00660 4f6f333e53e2982510b5c6a451235bfc 314 SUPERFAMILY SSF56176 223 307 8.45E-17 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CJD35_RS00660 4f6f333e53e2982510b5c6a451235bfc 314 SMART SM01091 224 306 3.3E-16 T 28-03-2018 IPR005170 Transporter-associated domain CJD35_RS00660 4f6f333e53e2982510b5c6a451235bfc 314 Gene3D G3DSA:3.30.465.10 217 305 6.5E-20 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CJD35_RS20580 a287f3dfaa4fc7478843ab704d761549 43 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 19 32 1.9E-5 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS20580 a287f3dfaa4fc7478843ab704d761549 43 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 8 19 1.9E-5 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS20580 a287f3dfaa4fc7478843ab704d761549 43 SUPERFAMILY SSF46955 8 43 2.43E-10 T 28-03-2018 IPR009061 Putative DNA-binding domain CJD35_RS20580 a287f3dfaa4fc7478843ab704d761549 43 Gene3D G3DSA:1.10.1660.10 1 43 1.5E-10 T 28-03-2018 CJD35_RS20580 a287f3dfaa4fc7478843ab704d761549 43 Pfam PF00376 MerR family regulatory protein 9 43 9.7E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS06455 8c7d91acf963ee93d1a2aacf68f9d71b 284 Pfam PF13460 NAD(P)H-binding 6 183 2.7E-17 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06455 8c7d91acf963ee93d1a2aacf68f9d71b 284 Gene3D G3DSA:3.40.50.720 63 284 3.3E-14 T 28-03-2018 CJD35_RS06455 8c7d91acf963ee93d1a2aacf68f9d71b 284 Gene3D G3DSA:3.40.50.720 1 62 4.2E-10 T 28-03-2018 CJD35_RS06455 8c7d91acf963ee93d1a2aacf68f9d71b 284 SUPERFAMILY SSF51735 3 231 7.34E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS16775 8c7fd926b2a34a2cdb10721a17137a87 337 SUPERFAMILY SSF51430 13 308 4.85E-88 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS16775 8c7fd926b2a34a2cdb10721a17137a87 337 Gene3D G3DSA:3.20.20.100 8 334 2.3E-90 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS16775 8c7fd926b2a34a2cdb10721a17137a87 337 Pfam PF00248 Aldo/keto reductase family 18 307 7.7E-68 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS17825 435d3256deb9c32a0959e1f0681564dc 168 SUPERFAMILY SSF46626 42 127 1.45E-10 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS17825 435d3256deb9c32a0959e1f0681564dc 168 Gene3D G3DSA:1.10.760.10 39 149 6.4E-6 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS03275 3d3a8a5a314ca39d96af5e97bca20394 187 Gene3D G3DSA:3.10.50.40 36 184 8.3E-38 T 28-03-2018 CJD35_RS03275 3d3a8a5a314ca39d96af5e97bca20394 187 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 42 69 9.5E-7 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CJD35_RS03275 3d3a8a5a314ca39d96af5e97bca20394 187 SUPERFAMILY SSF54534 40 162 6.09E-41 T 28-03-2018 CJD35_RS03275 3d3a8a5a314ca39d96af5e97bca20394 187 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 76 158 2.0E-18 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CJD35_RS18250 ca2223636a8df36cade610e6e7abf2e6 44 Gene3D G3DSA:3.30.420.10 1 44 9.3E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS18250 ca2223636a8df36cade610e6e7abf2e6 44 SUPERFAMILY SSF53098 1 44 5.31E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS21370 ca2223636a8df36cade610e6e7abf2e6 44 Gene3D G3DSA:3.30.420.10 1 44 9.3E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS21370 ca2223636a8df36cade610e6e7abf2e6 44 SUPERFAMILY SSF53098 1 44 5.31E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS06425 819f77b7f10082b9967c673d85b50eb6 174 SUPERFAMILY SSF89000 3 126 3.92E-24 T 28-03-2018 CJD35_RS06425 819f77b7f10082b9967c673d85b50eb6 174 Pfam PF02436 Conserved carboxylase domain 3 127 1.8E-20 T 28-03-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 CJD35_RS14245 08c56047225d48fc9cbf31b0319b18ef 727 Pfam PF00263 Bacterial type II and III secretion system protein 478 642 1.1E-50 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 CJD35_RS14245 08c56047225d48fc9cbf31b0319b18ef 727 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 26 651 1.2E-178 T 28-03-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 CJD35_RS14245 08c56047225d48fc9cbf31b0319b18ef 727 Pfam PF03958 Bacterial type II/III secretion system short domain 120 178 4.8E-10 T 28-03-2018 IPR005644 NolW-like CJD35_RS14245 08c56047225d48fc9cbf31b0319b18ef 727 Pfam PF03958 Bacterial type II/III secretion system short domain 182 251 3.1E-10 T 28-03-2018 IPR005644 NolW-like CJD35_RS14245 08c56047225d48fc9cbf31b0319b18ef 727 Pfam PF03958 Bacterial type II/III secretion system short domain 256 360 4.4E-12 T 28-03-2018 IPR005644 NolW-like CJD35_RS14245 08c56047225d48fc9cbf31b0319b18ef 727 PRINTS PR00811 Bacterial general secretion pathway protein D signature 606 624 2.9E-21 T 28-03-2018 IPR001775 GspD/PilQ family CJD35_RS14245 08c56047225d48fc9cbf31b0319b18ef 727 PRINTS PR00811 Bacterial general secretion pathway protein D signature 629 643 2.9E-21 T 28-03-2018 IPR001775 GspD/PilQ family CJD35_RS14245 08c56047225d48fc9cbf31b0319b18ef 727 PRINTS PR00811 Bacterial general secretion pathway protein D signature 360 370 2.9E-21 T 28-03-2018 IPR001775 GspD/PilQ family CJD35_RS14245 08c56047225d48fc9cbf31b0319b18ef 727 PRINTS PR00811 Bacterial general secretion pathway protein D signature 509 519 2.9E-21 T 28-03-2018 IPR001775 GspD/PilQ family CJD35_RS04700 2b5585676cf2ae6ba80a4d1d3a564a7c 339 Gene3D G3DSA:1.10.8.60 180 251 4.5E-18 T 28-03-2018 CJD35_RS04700 2b5585676cf2ae6ba80a4d1d3a564a7c 339 Pfam PF02954 Bacterial regulatory protein, Fis family 297 334 5.5E-6 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS04700 2b5585676cf2ae6ba80a4d1d3a564a7c 339 SMART SM00382 27 170 2.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS04700 2b5585676cf2ae6ba80a4d1d3a564a7c 339 Gene3D G3DSA:1.10.10.60 254 337 6.5E-10 T 28-03-2018 CJD35_RS04700 2b5585676cf2ae6ba80a4d1d3a564a7c 339 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 334 3.0E-141 T 28-03-2018 IPR014317 Transcription activator PspF CJD35_RS04700 2b5585676cf2ae6ba80a4d1d3a564a7c 339 SUPERFAMILY SSF52540 7 239 7.18E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS04700 2b5585676cf2ae6ba80a4d1d3a564a7c 339 Gene3D G3DSA:3.40.50.300 1 178 1.8E-27 T 28-03-2018 CJD35_RS04700 2b5585676cf2ae6ba80a4d1d3a564a7c 339 SUPERFAMILY SSF46689 221 336 7.62E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS04700 2b5585676cf2ae6ba80a4d1d3a564a7c 339 Pfam PF00158 Sigma-54 interaction domain 8 170 1.1E-59 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CJD35_RS04700 2b5585676cf2ae6ba80a4d1d3a564a7c 339 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 93 108 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CJD35_RS04700 2b5585676cf2ae6ba80a4d1d3a564a7c 339 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 221 230 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CJD35_RS16570 a9f262e5856d5bb163c6d8d2ad8f15d0 883 Gene3D G3DSA:2.60.40.10 691 851 1.4E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS16570 a9f262e5856d5bb163c6d8d2ad8f15d0 883 SUPERFAMILY SSF49478 799 854 3.92E-6 T 28-03-2018 CJD35_RS17060 20e01c4ac12c8640033ceaef996798cc 395 SUPERFAMILY SSF54506 180 387 2.35E-70 T 28-03-2018 CJD35_RS17060 20e01c4ac12c8640033ceaef996798cc 395 Pfam PF04303 PrpF protein 3 386 2.4E-165 T 28-03-2018 IPR007400 PrpF protein CJD35_RS17060 20e01c4ac12c8640033ceaef996798cc 395 Gene3D G3DSA:3.10.310.10 1 183 2.8E-79 T 28-03-2018 CJD35_RS17060 20e01c4ac12c8640033ceaef996798cc 395 Gene3D G3DSA:3.10.310.10 184 368 1.7E-66 T 28-03-2018 CJD35_RS17060 20e01c4ac12c8640033ceaef996798cc 395 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 1 388 8.6E-207 T 28-03-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 CJD35_RS17060 20e01c4ac12c8640033ceaef996798cc 395 SUPERFAMILY SSF54506 2 176 1.41E-65 T 28-03-2018 CJD35_RS00235 4644370a0e30edb162a09c4d5bd862e1 342 Gene3D G3DSA:3.40.50.2000 1 168 4.3E-9 T 28-03-2018 CJD35_RS00235 4644370a0e30edb162a09c4d5bd862e1 342 SUPERFAMILY SSF53756 2 328 1.3E-63 T 28-03-2018 CJD35_RS00235 4644370a0e30edb162a09c4d5bd862e1 342 Gene3D G3DSA:3.40.50.2000 169 318 2.8E-26 T 28-03-2018 CJD35_RS00235 4644370a0e30edb162a09c4d5bd862e1 342 Pfam PF13692 Glycosyl transferases group 1 182 303 3.0E-16 T 28-03-2018 CJD35_RS00235 4644370a0e30edb162a09c4d5bd862e1 342 Pfam PF13439 Glycosyltransferase Family 4 14 165 3.6E-17 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS06950 04674c3a7ef189c52f968272c3a4dfb9 356 Gene3D G3DSA:3.30.200.20 19 119 1.0E-26 T 28-03-2018 CJD35_RS06950 04674c3a7ef189c52f968272c3a4dfb9 356 SUPERFAMILY SSF56112 34 349 9.91E-55 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS06950 04674c3a7ef189c52f968272c3a4dfb9 356 Gene3D G3DSA:3.90.1200.10 120 310 2.5E-32 T 28-03-2018 CJD35_RS06950 04674c3a7ef189c52f968272c3a4dfb9 356 Pfam PF01636 Phosphotransferase enzyme family 42 303 2.1E-49 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CJD35_RS16585 202674a3a6b9a3b3f5f08f935e6d679c 487 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 32 478 1.5E-201 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CJD35_RS16585 202674a3a6b9a3b3f5f08f935e6d679c 487 Gene3D G3DSA:3.40.605.10 12 274 1.1E-101 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS16585 202674a3a6b9a3b3f5f08f935e6d679c 487 Pfam PF00171 Aldehyde dehydrogenase family 21 479 1.8E-163 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS16585 202674a3a6b9a3b3f5f08f935e6d679c 487 Gene3D G3DSA:3.40.309.10 275 466 5.2E-67 T 28-03-2018 CJD35_RS16585 202674a3a6b9a3b3f5f08f935e6d679c 487 SUPERFAMILY SSF53720 7 482 1.19E-165 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS16585 202674a3a6b9a3b3f5f08f935e6d679c 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS16585 202674a3a6b9a3b3f5f08f935e6d679c 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS03230 bde33a96b7ca21ebd2ac11112496ad36 247 SUPERFAMILY SSF117143 78 204 1.12E-17 T 28-03-2018 CJD35_RS03230 bde33a96b7ca21ebd2ac11112496ad36 247 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 237 4.6E-18 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJD35_RS03230 bde33a96b7ca21ebd2ac11112496ad36 247 Pfam PF00460 Flagella basal body rod protein 6 35 3.0E-5 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJD35_RS03230 bde33a96b7ca21ebd2ac11112496ad36 247 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 121 2.2E-33 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CJD35_RS21830 3f1c9719ade4a5a8426c5cb043b85da3 290 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 49 199 7.2E-12 T 28-03-2018 IPR000477 Reverse transcriptase domain CJD35_RS21830 3f1c9719ade4a5a8426c5cb043b85da3 290 Gene3D G3DSA:3.30.70.270 65 237 1.4E-10 T 28-03-2018 CJD35_RS21830 3f1c9719ade4a5a8426c5cb043b85da3 290 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 58 70 1.2E-15 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CJD35_RS21830 3f1c9719ade4a5a8426c5cb043b85da3 290 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 88 102 1.2E-15 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CJD35_RS21830 3f1c9719ade4a5a8426c5cb043b85da3 290 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 185 196 1.2E-15 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CJD35_RS21830 3f1c9719ade4a5a8426c5cb043b85da3 290 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 44 57 1.2E-15 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CJD35_RS21830 3f1c9719ade4a5a8426c5cb043b85da3 290 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 152 165 1.2E-15 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CJD35_RS21830 3f1c9719ade4a5a8426c5cb043b85da3 290 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 104 122 1.2E-15 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 CJD35_RS21830 3f1c9719ade4a5a8426c5cb043b85da3 290 SUPERFAMILY SSF56672 57 227 2.49E-6 T 28-03-2018 CJD35_RS01075 dec7254e80f45813d6efa76595a590fc 446 SUPERFAMILY SSF51338 34 90 1.27E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS01075 dec7254e80f45813d6efa76595a590fc 446 SUPERFAMILY SSF51338 385 420 1.27E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS01075 dec7254e80f45813d6efa76595a590fc 446 SUPERFAMILY SSF51556 117 386 5.9E-10 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS01075 dec7254e80f45813d6efa76595a590fc 446 Pfam PF01979 Amidohydrolase family 293 407 1.6E-11 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS01075 dec7254e80f45813d6efa76595a590fc 446 Gene3D G3DSA:2.30.40.10 25 124 3.9E-15 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS01075 dec7254e80f45813d6efa76595a590fc 446 Gene3D G3DSA:3.20.20.140 125 402 2.6E-19 T 28-03-2018 CJD35_RS19305 6de8b17d61198a0627960f9ac840419e 221 Pfam PF06912 Protein of unknown function (DUF1275) 12 203 9.0E-34 T 28-03-2018 IPR010699 Protein of unknown function DUF1275 CJD35_RS16365 be60afc26f06646c8006480ade667197 628 PIRSF PIRSF002583 2 628 4.7E-188 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS16365 be60afc26f06646c8006480ade667197 628 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 624 28.224 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS16365 be60afc26f06646c8006480ade667197 628 SUPERFAMILY SSF54211 232 483 1.14E-81 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS16365 be60afc26f06646c8006480ade667197 628 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 156 1.7E-10 T 28-03-2018 CJD35_RS16365 be60afc26f06646c8006480ade667197 628 SUPERFAMILY SSF110942 511 624 5.49E-27 T 28-03-2018 CJD35_RS16365 be60afc26f06646c8006480ade667197 628 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 28-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS16365 be60afc26f06646c8006480ade667197 628 SUPERFAMILY SSF55874 9 219 9.13E-62 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS16365 be60afc26f06646c8006480ade667197 628 Gene3D G3DSA:3.30.565.10 1 229 2.9E-48 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS16365 be60afc26f06646c8006480ade667197 628 Pfam PF00183 Hsp90 protein 225 627 5.4E-99 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CJD35_RS16365 be60afc26f06646c8006480ade667197 628 SMART SM00387 32 191 5.0E-4 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS16365 be60afc26f06646c8006480ade667197 628 PRINTS PR00775 90kDa heat shock protein signature 98 115 3.3E-53 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS16365 be60afc26f06646c8006480ade667197 628 PRINTS PR00775 90kDa heat shock protein signature 80 97 3.3E-53 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS16365 be60afc26f06646c8006480ade667197 628 PRINTS PR00775 90kDa heat shock protein signature 10 30 3.3E-53 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS16365 be60afc26f06646c8006480ade667197 628 PRINTS PR00775 90kDa heat shock protein signature 126 148 3.3E-53 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS16365 be60afc26f06646c8006480ade667197 628 PRINTS PR00775 90kDa heat shock protein signature 179 196 3.3E-53 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS16365 be60afc26f06646c8006480ade667197 628 PRINTS PR00775 90kDa heat shock protein signature 197 215 3.3E-53 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS16365 be60afc26f06646c8006480ade667197 628 PRINTS PR00775 90kDa heat shock protein signature 31 53 3.3E-53 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CJD35_RS19425 67e80adb2a62e4c891f2f3279eee4ada 330 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 14 184 3.9E-7 T 28-03-2018 CJD35_RS19425 67e80adb2a62e4c891f2f3279eee4ada 330 SUPERFAMILY SSF53850 6 135 1.14E-32 T 28-03-2018 CJD35_RS19425 67e80adb2a62e4c891f2f3279eee4ada 330 SUPERFAMILY SSF53850 166 319 1.14E-32 T 28-03-2018 CJD35_RS19425 67e80adb2a62e4c891f2f3279eee4ada 330 Gene3D G3DSA:3.40.190.10 84 214 3.2E-23 T 28-03-2018 CJD35_RS16945 dc17be41087bcb0f0b4dba8b1a019698 136 Pfam PF03203 MerC mercury resistance protein 12 121 3.3E-26 T 28-03-2018 IPR004891 MerC mercury resistance protein CJD35_RS08395 3a9d68b1042623bac5b8d7c05dc18dd0 299 PRINTS PR01270 Histone deacetylase superfamily signature 148 163 1.5E-15 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CJD35_RS08395 3a9d68b1042623bac5b8d7c05dc18dd0 299 PRINTS PR01270 Histone deacetylase superfamily signature 222 232 1.5E-15 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CJD35_RS08395 3a9d68b1042623bac5b8d7c05dc18dd0 299 PRINTS PR01270 Histone deacetylase superfamily signature 114 137 1.5E-15 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CJD35_RS08395 3a9d68b1042623bac5b8d7c05dc18dd0 299 Pfam PF00850 Histone deacetylase domain 24 283 4.5E-48 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CJD35_RS08395 3a9d68b1042623bac5b8d7c05dc18dd0 299 SUPERFAMILY SSF52768 4 286 3.98E-74 T 28-03-2018 CJD35_RS08395 3a9d68b1042623bac5b8d7c05dc18dd0 299 Gene3D G3DSA:3.40.800.20 2 298 3.2E-60 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 CJD35_RS17405 c1d1429826d0fc3c5f3e4c94a5f78b20 412 Pfam PF00266 Aminotransferase class-V 40 354 2.6E-21 T 28-03-2018 IPR000192 Aminotransferase class V domain CJD35_RS17405 c1d1429826d0fc3c5f3e4c94a5f78b20 412 Gene3D G3DSA:3.90.1150.10 288 412 8.9E-31 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS17405 c1d1429826d0fc3c5f3e4c94a5f78b20 412 SUPERFAMILY SSF53383 15 390 1.12E-87 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS17405 c1d1429826d0fc3c5f3e4c94a5f78b20 412 Gene3D G3DSA:3.40.640.10 28 287 2.4E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS17405 c1d1429826d0fc3c5f3e4c94a5f78b20 412 PIRSF PIRSF000524 11 411 6.5E-106 T 28-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 CJD35_RS19835 0dcb249466d084a090c29e52e89b5de1 324 Gene3D G3DSA:3.40.1090.10 6 321 2.8E-52 T 28-03-2018 CJD35_RS19835 0dcb249466d084a090c29e52e89b5de1 324 Pfam PF01734 Patatin-like phospholipase 23 200 4.3E-22 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CJD35_RS19835 0dcb249466d084a090c29e52e89b5de1 324 SUPERFAMILY SSF52151 19 310 3.14E-41 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CJD35_RS17030 5675e8e6702c99b61a5b2aa6a24d178a 263 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 225 1.4E-43 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS17030 5675e8e6702c99b61a5b2aa6a24d178a 263 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 94 127 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CJD35_RS17030 5675e8e6702c99b61a5b2aa6a24d178a 263 Gene3D G3DSA:3.40.1010.10 14 139 1.3E-33 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS17030 5675e8e6702c99b61a5b2aa6a24d178a 263 SUPERFAMILY SSF53790 12 246 5.37E-65 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS17030 5675e8e6702c99b61a5b2aa6a24d178a 263 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 14 246 1.2E-75 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CJD35_RS17030 5675e8e6702c99b61a5b2aa6a24d178a 263 Gene3D G3DSA:3.30.950.10 140 261 8.3E-25 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CJD35_RS21345 2613fc108809e862e41f9c03ee99fd27 96 Pfam PF02583 Metal-sensitive transcriptional repressor 7 90 1.8E-18 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CJD35_RS18225 2613fc108809e862e41f9c03ee99fd27 96 Pfam PF02583 Metal-sensitive transcriptional repressor 7 90 1.8E-18 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CJD35_RS04870 43e4205c2aeb295676dfb1250b745e60 300 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 79 101 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site CJD35_RS04870 43e4205c2aeb295676dfb1250b745e60 300 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 25 295 4.8E-87 T 28-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CJD35_RS04870 43e4205c2aeb295676dfb1250b745e60 300 Pfam PF01040 UbiA prenyltransferase family 41 274 8.0E-49 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CJD35_RS06720 1f1370f3bba07a9f7bf4dc0d242e17fd 135 Pfam PF09832 Uncharacterized protein conserved in bacteria (DUF2059) 58 107 4.9E-7 T 28-03-2018 IPR018637 Domain of unknown function DUF2059 CJD35_RS06375 8bf91d795d25a35bab9180c39f65a77d 383 SUPERFAMILY SSF53901 5 224 2.37E-25 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06375 8bf91d795d25a35bab9180c39f65a77d 383 SUPERFAMILY SSF53901 231 371 2.21E-16 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06375 8bf91d795d25a35bab9180c39f65a77d 383 PIRSF PIRSF000429 1 373 1.4E-26 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS06375 8bf91d795d25a35bab9180c39f65a77d 383 Gene3D G3DSA:3.40.47.10 2 221 1.7E-19 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS06375 8bf91d795d25a35bab9180c39f65a77d 383 Gene3D G3DSA:3.40.47.10 222 376 7.3E-5 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS10430 68b6dfd275e0a9f332105d9de1db1c31 357 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 357 4.8E-124 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CJD35_RS10430 68b6dfd275e0a9f332105d9de1db1c31 357 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 24 355 24.469 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CJD35_RS10430 68b6dfd275e0a9f332105d9de1db1c31 357 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.2E-5 T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CJD35_RS10430 68b6dfd275e0a9f332105d9de1db1c31 357 ProSitePatterns PS01348 MraY family signature 2. 186 197 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CJD35_RS10430 68b6dfd275e0a9f332105d9de1db1c31 357 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CJD35_RS10430 68b6dfd275e0a9f332105d9de1db1c31 357 Pfam PF00953 Glycosyl transferase family 4 99 281 6.2E-34 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CJD35_RS07360 14c6bbd6bfe4a641f15b3b377489f6a2 262 SMART SM00382 50 237 4.0E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS07360 14c6bbd6bfe4a641f15b3b377489f6a2 262 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 26 262 8.9E-108 T 28-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CJD35_RS07360 14c6bbd6bfe4a641f15b3b377489f6a2 262 Gene3D G3DSA:3.40.50.300 24 259 7.3E-62 T 28-03-2018 CJD35_RS07360 14c6bbd6bfe4a641f15b3b377489f6a2 262 SUPERFAMILY SSF52540 27 258 4.87E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS07360 14c6bbd6bfe4a641f15b3b377489f6a2 262 Pfam PF00005 ABC transporter 41 187 5.3E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS02845 928825a70e07ca63f31f9f745133176c 1405 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1055 1405 8.7E-58 T 28-03-2018 IPR007452 Translocation and assembly module TamB CJD35_RS03165 01e66b287804f451d9eb6e940e94890d 611 SUPERFAMILY SSF53448 123 393 3.94E-25 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS03165 01e66b287804f451d9eb6e940e94890d 611 Pfam PF13632 Glycosyl transferase family group 2 217 429 3.1E-19 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS03165 01e66b287804f451d9eb6e940e94890d 611 Gene3D G3DSA:3.90.550.10 110 379 2.5E-18 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS05485 d87acbb5627fcffe440cea0ae1b8a0ad 116 SMART SM00418 12 93 1.3E-15 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS05485 d87acbb5627fcffe440cea0ae1b8a0ad 116 SUPERFAMILY SSF46785 7 97 2.85E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05485 d87acbb5627fcffe440cea0ae1b8a0ad 116 Gene3D G3DSA:1.10.10.10 2 100 1.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05485 d87acbb5627fcffe440cea0ae1b8a0ad 116 Pfam PF12840 Helix-turn-helix domain 13 73 6.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05485 d87acbb5627fcffe440cea0ae1b8a0ad 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 3.0E-10 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS05485 d87acbb5627fcffe440cea0ae1b8a0ad 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 14 29 3.0E-10 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS05485 d87acbb5627fcffe440cea0ae1b8a0ad 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 3.0E-10 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS10915 c7dd771ca5b8231bf4fb1862566a5861 118 SUPERFAMILY SSF82771 18 105 8.63E-17 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS10915 c7dd771ca5b8231bf4fb1862566a5861 118 Pfam PF01541 GIY-YIG catalytic domain 20 90 2.5E-11 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS10915 c7dd771ca5b8231bf4fb1862566a5861 118 Gene3D G3DSA:3.40.1440.10 18 110 9.7E-16 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS07165 e2f10df03212183cab310f941feb30e8 191 Gene3D G3DSA:2.30.110.10 1 191 7.4E-65 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CJD35_RS07165 e2f10df03212183cab310f941feb30e8 191 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 151 191 6.0E-13 T 28-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CJD35_RS07165 e2f10df03212183cab310f941feb30e8 191 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 18 97 7.6E-25 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CJD35_RS07165 e2f10df03212183cab310f941feb30e8 191 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 2 186 5.8E-67 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CJD35_RS07165 e2f10df03212183cab310f941feb30e8 191 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 1 191 35.624 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CJD35_RS07165 e2f10df03212183cab310f941feb30e8 191 SUPERFAMILY SSF50475 1 191 2.06E-63 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CJD35_RS07165 e2f10df03212183cab310f941feb30e8 191 PIRSF PIRSF000190 1 191 1.8E-68 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CJD35_RS07165 e2f10df03212183cab310f941feb30e8 191 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 161 174 - T 28-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CJD35_RS12455 f41076381abbde85e229d3ced123f7e6 364 Pfam PF12698 ABC-2 family transporter protein 212 347 8.9E-12 T 28-03-2018 CJD35_RS12455 f41076381abbde85e229d3ced123f7e6 364 Pfam PF12698 ABC-2 family transporter protein 22 194 4.1E-15 T 28-03-2018 CJD35_RS12455 f41076381abbde85e229d3ced123f7e6 364 Gene3D G3DSA:3.40.1710.10 40 190 9.8E-15 T 28-03-2018 CJD35_RS17585 df6b5ffaa2100d29d10a89ac69f104cc 312 Gene3D G3DSA:1.10.10.60 201 256 1.7E-7 T 28-03-2018 CJD35_RS17585 df6b5ffaa2100d29d10a89ac69f104cc 312 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 256 299 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CJD35_RS17585 df6b5ffaa2100d29d10a89ac69f104cc 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 272 287 7.7E-8 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS17585 df6b5ffaa2100d29d10a89ac69f104cc 312 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 287 303 7.7E-8 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS17585 df6b5ffaa2100d29d10a89ac69f104cc 312 Gene3D G3DSA:1.10.10.60 257 309 1.7E-14 T 28-03-2018 CJD35_RS17585 df6b5ffaa2100d29d10a89ac69f104cc 312 Pfam PF14525 AraC-binding-like domain 24 190 3.0E-18 T 28-03-2018 IPR035418 Transcription regulator HTH, AraC- type, ligand binding domain-like CJD35_RS17585 df6b5ffaa2100d29d10a89ac69f104cc 312 Pfam PF12833 Helix-turn-helix domain 227 304 1.4E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS17585 df6b5ffaa2100d29d10a89ac69f104cc 312 SMART SM00342 219 303 2.9E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS17585 df6b5ffaa2100d29d10a89ac69f104cc 312 SUPERFAMILY SSF46689 255 305 1.21E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS01365 de37c6e2ad03158a6be87d538ba3b0f1 170 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 7 159 5.9E-53 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CJD35_RS01365 de37c6e2ad03158a6be87d538ba3b0f1 170 SUPERFAMILY SSF52374 5 157 1.66E-40 T 28-03-2018 CJD35_RS01365 de37c6e2ad03158a6be87d538ba3b0f1 170 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 60 2.6E-18 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CJD35_RS01365 de37c6e2ad03158a6be87d538ba3b0f1 170 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 5 162 31.848 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CJD35_RS01365 de37c6e2ad03158a6be87d538ba3b0f1 170 Pfam PF01467 Cytidylyltransferase-like 8 137 3.2E-19 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CJD35_RS01365 de37c6e2ad03158a6be87d538ba3b0f1 170 Gene3D G3DSA:3.40.50.620 1 162 1.1E-30 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS01365 de37c6e2ad03158a6be87d538ba3b0f1 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 116 138 4.4E-32 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CJD35_RS01365 de37c6e2ad03158a6be87d538ba3b0f1 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 23 44 4.4E-32 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CJD35_RS01365 de37c6e2ad03158a6be87d538ba3b0f1 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 5 23 4.4E-32 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CJD35_RS01365 de37c6e2ad03158a6be87d538ba3b0f1 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 89 105 4.4E-32 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CJD35_RS01365 de37c6e2ad03158a6be87d538ba3b0f1 170 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 52 76 4.4E-32 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CJD35_RS20360 fcede65475ab8594779115bece552211 300 Pfam PF08401 Domain of unknown function (DUF1738) 12 131 1.1E-36 T 28-03-2018 IPR013610 Domain of unknown function DUF1738 CJD35_RS20360 fcede65475ab8594779115bece552211 300 PIRSF PIRSF037112 1 300 5.9E-115 T 28-03-2018 IPR017113 Antirestriction, ArdC CJD35_RS20385 96ceda1e7030fff9315302cb273291a1 692 SUPERFAMILY SSF110849 4 105 1.92E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS20385 96ceda1e7030fff9315302cb273291a1 692 Gene3D G3DSA:3.90.1530.10 1 105 7.1E-14 T 28-03-2018 CJD35_RS20385 96ceda1e7030fff9315302cb273291a1 692 SUPERFAMILY SSF109709 99 202 1.22E-17 T 28-03-2018 CJD35_RS20385 96ceda1e7030fff9315302cb273291a1 692 Gene3D G3DSA:1.10.10.730 106 151 1.0E-4 T 28-03-2018 CJD35_RS20385 96ceda1e7030fff9315302cb273291a1 692 SMART SM00470 3 99 1.1E-6 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS20385 96ceda1e7030fff9315302cb273291a1 692 Pfam PF02195 ParB-like nuclease domain 4 92 1.3E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS08925 c5a7a15b99166b306f0390c8645d3bf0 561 Gene3D G3DSA:3.20.20.450 296 546 3.0E-92 T 28-03-2018 IPR001633 EAL domain CJD35_RS08925 c5a7a15b99166b306f0390c8645d3bf0 561 Pfam PF00990 Diguanylate cyclase, GGDEF domain 122 284 5.8E-38 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS08925 c5a7a15b99166b306f0390c8645d3bf0 561 SMART SM00052 299 544 3.7E-98 T 28-03-2018 IPR001633 EAL domain CJD35_RS08925 c5a7a15b99166b306f0390c8645d3bf0 561 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 119 288 1.2E-33 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS08925 c5a7a15b99166b306f0390c8645d3bf0 561 SMART SM00267 111 289 1.0E-47 T 28-03-2018 IPR000160 GGDEF domain CJD35_RS08925 c5a7a15b99166b306f0390c8645d3bf0 561 SUPERFAMILY SSF141868 304 549 1.83E-82 T 28-03-2018 IPR001633 EAL domain CJD35_RS08925 c5a7a15b99166b306f0390c8645d3bf0 561 Pfam PF00563 EAL domain 305 539 1.5E-70 T 28-03-2018 IPR001633 EAL domain CJD35_RS08925 c5a7a15b99166b306f0390c8645d3bf0 561 SUPERFAMILY SSF55073 128 291 1.55E-41 T 28-03-2018 IPR029787 Nucleotide cyclase CJD35_RS08925 c5a7a15b99166b306f0390c8645d3bf0 561 Gene3D G3DSA:3.30.70.270 116 295 6.0E-52 T 28-03-2018 CJD35_RS18020 fe2ee323b8a22059213b4ed85c352c4a 545 Gene3D G3DSA:3.20.20.70 127 535 2.5E-84 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS18020 fe2ee323b8a22059213b4ed85c352c4a 545 SUPERFAMILY SSF51395 23 512 1.47E-122 T 28-03-2018 CJD35_RS18020 fe2ee323b8a22059213b4ed85c352c4a 545 PIRSF PIRSF006429 25 544 1.3E-144 T 28-03-2018 IPR024188 Glutamate synthase large subunit-like protein CJD35_RS18020 fe2ee323b8a22059213b4ed85c352c4a 545 PIRSF PIRSF500060 23 541 3.5E-207 T 28-03-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria CJD35_RS18020 fe2ee323b8a22059213b4ed85c352c4a 545 Pfam PF01645 Conserved region in glutamate synthase 156 485 1.3E-81 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CJD35_RS20295 828e74030e08177d4261dd0e22aac35d 91 Pfam PF02583 Metal-sensitive transcriptional repressor 9 88 3.0E-21 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CJD35_RS19115 828e74030e08177d4261dd0e22aac35d 91 Pfam PF02583 Metal-sensitive transcriptional repressor 9 88 3.0E-21 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CJD35_RS19355 f79f46f3f226213d9f65f448adf33be2 307 SUPERFAMILY SSF53041 3 136 3.27E-42 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS19355 f79f46f3f226213d9f65f448adf33be2 307 Pfam PF00239 Resolvase, N terminal domain 4 136 6.7E-43 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS19355 f79f46f3f226213d9f65f448adf33be2 307 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS19355 f79f46f3f226213d9f65f448adf33be2 307 Gene3D G3DSA:3.40.50.1390 1 105 1.1E-32 T 28-03-2018 CJD35_RS19355 f79f46f3f226213d9f65f448adf33be2 307 Gene3D G3DSA:1.20.5.40 106 135 3.3E-15 T 28-03-2018 CJD35_RS19355 f79f46f3f226213d9f65f448adf33be2 307 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS19355 f79f46f3f226213d9f65f448adf33be2 307 SMART SM00857 3 137 2.2E-54 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS04000 95db51d284478b2595d7d354bdc623c1 304 SUPERFAMILY SSF55326 10 135 2.97E-28 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS04000 95db51d284478b2595d7d354bdc623c1 304 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 135 6.1E-19 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS04000 95db51d284478b2595d7d354bdc623c1 304 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 13 303 1.9E-76 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CJD35_RS04000 95db51d284478b2595d7d354bdc623c1 304 Pfam PF02769 AIR synthase related protein, C-terminal domain 147 255 5.7E-11 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS04000 95db51d284478b2595d7d354bdc623c1 304 Gene3D G3DSA:3.30.1330.10 4 137 8.7E-27 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CJD35_RS04000 95db51d284478b2595d7d354bdc623c1 304 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 301 26.119 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CJD35_RS04000 95db51d284478b2595d7d354bdc623c1 304 Gene3D G3DSA:3.90.650.10 142 303 4.5E-33 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS04000 95db51d284478b2595d7d354bdc623c1 304 SUPERFAMILY SSF56042 142 290 8.97E-31 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CJD35_RS04000 95db51d284478b2595d7d354bdc623c1 304 PIRSF PIRSF005303 2 304 3.9E-70 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CJD35_RS17620 1fc95546338f10032ee3cd347f12d249 141 Gene3D G3DSA:3.10.129.10 2 140 4.4E-20 T 28-03-2018 CJD35_RS17620 1fc95546338f10032ee3cd347f12d249 141 SUPERFAMILY SSF54637 6 140 1.1E-23 T 28-03-2018 IPR029069 HotDog domain CJD35_RS03870 17f40375733c7770ef6de2ec968d3c45 320 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 176 1.1E-23 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CJD35_RS03870 17f40375733c7770ef6de2ec968d3c45 320 SUPERFAMILY SSF51735 1 294 5.55E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS03870 17f40375733c7770ef6de2ec968d3c45 320 Gene3D G3DSA:3.40.50.720 1 299 1.8E-41 T 28-03-2018 CJD35_RS02890 945b6d5bf614b167c04ed24eb62166eb 161 SUPERFAMILY SSF54534 85 159 1.57E-19 T 28-03-2018 CJD35_RS02890 945b6d5bf614b167c04ed24eb62166eb 161 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 25.254 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CJD35_RS02890 945b6d5bf614b167c04ed24eb62166eb 161 Pfam PF03449 Transcription elongation factor, N-terminal 7 77 3.7E-20 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CJD35_RS02890 945b6d5bf614b167c04ed24eb62166eb 161 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 86 159 3.1E-21 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJD35_RS02890 945b6d5bf614b167c04ed24eb62166eb 161 Gene3D G3DSA:1.10.287.180 6 78 2.4E-21 T 28-03-2018 CJD35_RS02890 945b6d5bf614b167c04ed24eb62166eb 161 SUPERFAMILY SSF46557 7 80 8.37E-23 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CJD35_RS02890 945b6d5bf614b167c04ed24eb62166eb 161 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 7 160 1.8E-51 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CJD35_RS02890 945b6d5bf614b167c04ed24eb62166eb 161 Gene3D G3DSA:3.10.50.30 79 160 6.9E-22 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CJD35_RS02890 945b6d5bf614b167c04ed24eb62166eb 161 PIRSF PIRSF006092 1 161 1.6E-39 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CJD35_RS02890 945b6d5bf614b167c04ed24eb62166eb 161 Hamap MF_00930 Transcription elongation factor GreB [greB]. 4 160 45.348 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CJD35_RS10365 c3015bd315974130c7f3e72128a6999c 135 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 74 1.2E-16 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CJD35_RS10365 c3015bd315974130c7f3e72128a6999c 135 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.3E-6 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CJD35_RS10365 c3015bd315974130c7f3e72128a6999c 135 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.3E-6 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CJD35_RS01150 6c14fd75c98e3eba48a0cf5e620e339d 308 Gene3D G3DSA:3.90.226.10 70 307 4.8E-36 T 28-03-2018 CJD35_RS01150 6c14fd75c98e3eba48a0cf5e620e339d 308 Pfam PF00378 Enoyl-CoA hydratase/isomerase 93 243 5.9E-24 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS01150 6c14fd75c98e3eba48a0cf5e620e339d 308 SUPERFAMILY SSF52096 88 261 1.83E-34 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS12385 653a24b3d695f7f01a063641282cccca 345 SUPERFAMILY SSF88713 60 228 1.17E-10 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CJD35_RS12385 653a24b3d695f7f01a063641282cccca 345 Gene3D G3DSA:3.20.20.370 32 343 2.3E-22 T 28-03-2018 CJD35_RS08640 bc0e887f0bb72247a8de990d0fa24fa6 59 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 1.8E-13 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CJD35_RS08640 bc0e887f0bb72247a8de990d0fa24fa6 59 Gene3D G3DSA:3.30.1390.20 4 58 8.4E-19 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CJD35_RS08640 bc0e887f0bb72247a8de990d0fa24fa6 59 PIRSF PIRSF002211 1 59 3.7E-20 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08640 bc0e887f0bb72247a8de990d0fa24fa6 59 SUPERFAMILY SSF55129 1 57 1.44E-16 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CJD35_RS08640 bc0e887f0bb72247a8de990d0fa24fa6 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 6.1E-21 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08640 bc0e887f0bb72247a8de990d0fa24fa6 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 15.142 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS06250 1f5f766217ddef35ee23490eafa7d243 165 SUPERFAMILY SSF51230 86 161 5.23E-18 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS06250 1f5f766217ddef35ee23490eafa7d243 165 Pfam PF00364 Biotin-requiring enzyme 90 162 8.2E-17 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS06250 1f5f766217ddef35ee23490eafa7d243 165 Gene3D G3DSA:2.40.50.100 121 165 6.3E-13 T 28-03-2018 CJD35_RS06250 1f5f766217ddef35ee23490eafa7d243 165 Gene3D G3DSA:2.40.50.100 45 120 0.082 T 28-03-2018 CJD35_RS06250 1f5f766217ddef35ee23490eafa7d243 165 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 119 136 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS06250 1f5f766217ddef35ee23490eafa7d243 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 109 123 1.5E-11 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CJD35_RS06250 1f5f766217ddef35ee23490eafa7d243 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 124 137 1.5E-11 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CJD35_RS06250 1f5f766217ddef35ee23490eafa7d243 165 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 92 105 1.5E-11 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CJD35_RS04535 d28422ac02091dc4f37844a0e5c02c86 436 Pfam PF00202 Aminotransferase class-III 33 421 2.1E-77 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS04535 d28422ac02091dc4f37844a0e5c02c86 436 PIRSF PIRSF000521 194 426 2.0E-30 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS04535 d28422ac02091dc4f37844a0e5c02c86 436 PIRSF PIRSF000521 6 142 1.0E-5 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS04535 d28422ac02091dc4f37844a0e5c02c86 436 PIRSF PIRSF000521 136 169 8.3 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS04535 d28422ac02091dc4f37844a0e5c02c86 436 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 247 283 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CJD35_RS04535 d28422ac02091dc4f37844a0e5c02c86 436 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 18 424 6.7E-181 T 28-03-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 CJD35_RS04535 d28422ac02091dc4f37844a0e5c02c86 436 Gene3D G3DSA:3.40.640.10 186 317 2.1E-31 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS04535 d28422ac02091dc4f37844a0e5c02c86 436 Gene3D G3DSA:3.90.1150.10 13 172 1.3E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS04535 d28422ac02091dc4f37844a0e5c02c86 436 Gene3D G3DSA:3.90.1150.10 318 427 7.9E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS04535 d28422ac02091dc4f37844a0e5c02c86 436 SUPERFAMILY SSF53383 23 423 1.3E-102 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS04535 d28422ac02091dc4f37844a0e5c02c86 436 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 19 428 1.4E-135 T 28-03-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855 CJD35_RS17305 2716c54440ff10240ed0b6478e365908 525 SUPERFAMILY SSF51905 313 442 5.93E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17305 2716c54440ff10240ed0b6478e365908 525 SUPERFAMILY SSF51905 117 216 5.93E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17305 2716c54440ff10240ed0b6478e365908 525 Pfam PF04273 Putative phosphatase (DUF442) 3 104 5.5E-33 T 28-03-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CJD35_RS17305 2716c54440ff10240ed0b6478e365908 525 Gene3D G3DSA:3.50.50.60 362 452 4.1E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17305 2716c54440ff10240ed0b6478e365908 525 Gene3D G3DSA:3.90.190.10 1 101 1.0E-5 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like CJD35_RS17305 2716c54440ff10240ed0b6478e365908 525 Gene3D G3DSA:3.50.50.60 244 361 1.7E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17305 2716c54440ff10240ed0b6478e365908 525 Gene3D G3DSA:3.50.50.60 116 243 1.1E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS17305 2716c54440ff10240ed0b6478e365908 525 TIGRFAM TIGR01244 TIGR01244: TIGR01244 family protein 2 111 7.1E-31 T 28-03-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 CJD35_RS17305 2716c54440ff10240ed0b6478e365908 525 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 118 247 6.4E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS12415 a263356c127274c8c546169ded16a2ff 236 SUPERFAMILY SSF52172 10 189 1.96E-37 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS12415 a263356c127274c8c546169ded16a2ff 236 Gene3D G3DSA:1.10.10.10 133 236 1.2E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12415 a263356c127274c8c546169ded16a2ff 236 Gene3D G3DSA:3.40.50.2300 2 132 5.2E-32 T 28-03-2018 CJD35_RS12415 a263356c127274c8c546169ded16a2ff 236 SMART SM00448 11 122 6.0E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS12415 a263356c127274c8c546169ded16a2ff 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 230 5.1E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS12415 a263356c127274c8c546169ded16a2ff 236 SMART SM00862 155 230 5.2E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CJD35_RS12415 a263356c127274c8c546169ded16a2ff 236 Pfam PF00072 Response regulator receiver domain 13 122 1.2E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS16720 6ee494d8b5a016b6b30693d983dc9f70 235 SUPERFAMILY SSF51182 133 234 1.21E-13 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS16720 6ee494d8b5a016b6b30693d983dc9f70 235 SUPERFAMILY SSF51182 34 109 3.87E-7 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS16720 6ee494d8b5a016b6b30693d983dc9f70 235 Pfam PF05899 Protein of unknown function (DUF861) 156 229 2.2E-14 T 28-03-2018 IPR008579 Domain of unknown function DUF861, cupin-3 KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 CJD35_RS16720 6ee494d8b5a016b6b30693d983dc9f70 235 Gene3D G3DSA:2.60.120.10 19 125 1.3E-9 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS16720 6ee494d8b5a016b6b30693d983dc9f70 235 Gene3D G3DSA:2.60.120.10 126 235 6.3E-10 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 2.5E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 2.5E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 2.5E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 Gene3D G3DSA:3.40.50.720 55 258 6.4E-58 T 28-03-2018 CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.9E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.9E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 1.9E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.9E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.9E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.9E-34 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 Gene3D G3DSA:3.40.50.10090 4 54 5.3E-11 T 28-03-2018 CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 257 9.1E-53 T 28-03-2018 CJD35_RS15595 f1ad9b0c7a174f9aaf2ae945cab41a69 258 SUPERFAMILY SSF51735 10 258 1.43E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS20225 7a3328bc40bd5b80f2a5581762050a97 152 Pfam PF14081 Domain of unknown function (DUF4262) 22 144 1.6E-26 T 28-03-2018 IPR025358 Protein of unknown function DUF4262 CJD35_RS09150 8cb561615a2a7d8c0002102173b7268b 292 Pfam PF01739 CheR methyltransferase, SAM binding domain 80 265 8.4E-48 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CJD35_RS09150 8cb561615a2a7d8c0002102173b7268b 292 SUPERFAMILY SSF47757 16 77 7.85E-6 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CJD35_RS09150 8cb561615a2a7d8c0002102173b7268b 292 Gene3D G3DSA:3.40.50.150 79 276 6.7E-39 T 28-03-2018 CJD35_RS09150 8cb561615a2a7d8c0002102173b7268b 292 SUPERFAMILY SSF53335 80 267 3.62E-39 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS09150 8cb561615a2a7d8c0002102173b7268b 292 PRINTS PR00996 Glutamate methyltransferase family signature 73 85 3.4E-25 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS09150 8cb561615a2a7d8c0002102173b7268b 292 PRINTS PR00996 Glutamate methyltransferase family signature 234 257 3.4E-25 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS09150 8cb561615a2a7d8c0002102173b7268b 292 PRINTS PR00996 Glutamate methyltransferase family signature 147 163 3.4E-25 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS09150 8cb561615a2a7d8c0002102173b7268b 292 PRINTS PR00996 Glutamate methyltransferase family signature 215 229 3.4E-25 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS09150 8cb561615a2a7d8c0002102173b7268b 292 PRINTS PR00996 Glutamate methyltransferase family signature 112 132 3.4E-25 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS09150 8cb561615a2a7d8c0002102173b7268b 292 SMART SM00138 12 275 1.7E-55 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CJD35_RS21790 a6525b15149cd7e0e8ad1654b4512162 202 Pfam PF09335 SNARE associated Golgi protein 30 160 1.9E-24 T 28-03-2018 IPR032816 SNARE associated Golgi protein CJD35_RS09375 bdbc5b977cc823fc8d611ada116daf0d 327 Pfam PF13449 Esterase-like activity of phytase 67 313 1.8E-28 T 28-03-2018 IPR027372 Phytase-like domain CJD35_RS09375 bdbc5b977cc823fc8d611ada116daf0d 327 PIRSF PIRSF031900 1 327 6.7E-29 T 28-03-2018 IPR014567 Uncharacterised conserved protein UCP031900 CJD35_RS19780 c505161266ef4d9d4bae66133305d244 248 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 113 237 1.4E-27 T 28-03-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup CJD35_RS19780 c505161266ef4d9d4bae66133305d244 248 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 114 225 4.2E-33 T 28-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC CJD35_RS05085 1a021350ac70ce23bbbb83cce713140a 290 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 19 200 2.8E-23 T 28-03-2018 IPR008775 Phytanoyl-CoA dioxygenase CJD35_RS05085 1a021350ac70ce23bbbb83cce713140a 290 SUPERFAMILY SSF51197 15 243 2.66E-42 T 28-03-2018 CJD35_RS05085 1a021350ac70ce23bbbb83cce713140a 290 Gene3D G3DSA:2.60.120.620 10 224 1.6E-32 T 28-03-2018 CJD35_RS22015 74831d81663332ddbf8da57c0c5489f2 248 Pfam PF03929 PepSY-associated TM region 15 238 1.1E-7 T 28-03-2018 IPR005625 PepSY-associated TM protein CJD35_RS22015 74831d81663332ddbf8da57c0c5489f2 248 Gene3D G3DSA:1.20.1250.20 11 247 0.0025 T 28-03-2018 CJD35_RS07375 69aa07ae3d7acc65aad7ac1001ffdfa9 346 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 124 1.8E-33 T 28-03-2018 CJD35_RS07375 69aa07ae3d7acc65aad7ac1001ffdfa9 346 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 13 341 3.0E-111 T 28-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 CJD35_RS07375 69aa07ae3d7acc65aad7ac1001ffdfa9 346 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 151 261 8.7E-16 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS07375 69aa07ae3d7acc65aad7ac1001ffdfa9 346 Gene3D G3DSA:3.10.180.10 146 343 6.1E-58 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS07375 69aa07ae3d7acc65aad7ac1001ffdfa9 346 SUPERFAMILY SSF54593 5 329 7.87E-73 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS07375 69aa07ae3d7acc65aad7ac1001ffdfa9 346 PIRSF PIRSF009283 1 343 1.4E-108 T 28-03-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 CJD35_RS07375 69aa07ae3d7acc65aad7ac1001ffdfa9 346 Gene3D G3DSA:3.10.180.10 2 136 2.7E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS03655 54c971a5dc3aa379177d0b68be492e45 170 Gene3D G3DSA:1.20.950.20 1 170 2.1E-32 T 28-03-2018 CJD35_RS03655 54c971a5dc3aa379177d0b68be492e45 170 SUPERFAMILY SSF81342 3 170 1.8E-33 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CJD35_RS03655 54c971a5dc3aa379177d0b68be492e45 170 Pfam PF01292 Prokaryotic cytochrome b561 3 170 4.5E-28 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CJD35_RS22185 ed5d1488b5642b3d84edad897d0423ee 144 Pfam PF09722 Protein of unknown function (DUF2384) 91 141 2.1E-11 T 28-03-2018 IPR024467 Domain of unknown function DUF2384 CJD35_RS22185 ed5d1488b5642b3d84edad897d0423ee 144 TIGRFAM TIGR02293 TAS_TIGR02293: putative toxin-antitoxin system antitoxin component, TIGR02293 family 19 141 6.5E-34 T 28-03-2018 IPR011979 Conserved hypothetical protein CHP02293 CJD35_RS05170 d2133b2fedede1565e2207c464b925d9 136 Pfam PF00565 Staphylococcal nuclease homologue 44 121 1.2E-10 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS05170 d2133b2fedede1565e2207c464b925d9 136 Gene3D G3DSA:2.40.50.90 23 135 1.2E-21 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain CJD35_RS05170 d2133b2fedede1565e2207c464b925d9 136 SUPERFAMILY SSF50199 20 130 6.8E-21 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS05170 d2133b2fedede1565e2207c464b925d9 136 SMART SM00318 22 132 4.6E-4 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS04310 37bff96842066e7e76c5b4b5a000ebe2 236 Pfam PF00005 ABC transporter 21 168 2.1E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS04310 37bff96842066e7e76c5b4b5a000ebe2 236 SMART SM00382 30 218 1.9E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS04310 37bff96842066e7e76c5b4b5a000ebe2 236 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 4 218 1.8E-83 T 28-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CJD35_RS04310 37bff96842066e7e76c5b4b5a000ebe2 236 Gene3D G3DSA:3.40.50.300 1 224 3.7E-58 T 28-03-2018 CJD35_RS04310 37bff96842066e7e76c5b4b5a000ebe2 236 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS04310 37bff96842066e7e76c5b4b5a000ebe2 236 SUPERFAMILY SSF52540 4 224 3.64E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS11960 8f02a11c067f8ac8e5fa1dcbd97220b3 261 SUPERFAMILY SSF52402 21 206 4.89E-46 T 28-03-2018 CJD35_RS11960 8f02a11c067f8ac8e5fa1dcbd97220b3 261 PIRSF PIRSF000857 2 246 2.5E-75 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CJD35_RS11960 8f02a11c067f8ac8e5fa1dcbd97220b3 261 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 50 217 3.5E-35 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CJD35_RS11960 8f02a11c067f8ac8e5fa1dcbd97220b3 261 Gene3D G3DSA:3.40.50.620 11 247 6.0E-37 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS10070 6ee4a1406c4e660232bbe147ee620f20 377 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 10 374 5.7E-72 T 28-03-2018 IPR024455 Phage capsid CJD35_RS10070 6ee4a1406c4e660232bbe147ee620f20 377 SUPERFAMILY SSF56563 104 369 1.83E-47 T 28-03-2018 CJD35_RS10070 6ee4a1406c4e660232bbe147ee620f20 377 Gene3D G3DSA:3.30.2400.10 133 293 9.3E-26 T 28-03-2018 CJD35_RS10070 6ee4a1406c4e660232bbe147ee620f20 377 Pfam PF05065 Phage capsid family 112 370 1.9E-54 T 28-03-2018 IPR024455 Phage capsid CJD35_RS02695 e7d1ea9638b7d061744429e8a4298813 403 Pfam PF00872 Transposase, Mutator family 9 371 1.7E-128 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CJD35_RS06960 e7d1ea9638b7d061744429e8a4298813 403 Pfam PF00872 Transposase, Mutator family 9 371 1.7E-128 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CJD35_RS21335 e7d1ea9638b7d061744429e8a4298813 403 Pfam PF00872 Transposase, Mutator family 9 371 1.7E-128 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CJD35_RS18870 e7d1ea9638b7d061744429e8a4298813 403 Pfam PF00872 Transposase, Mutator family 9 371 1.7E-128 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CJD35_RS16220 e7d1ea9638b7d061744429e8a4298813 403 Pfam PF00872 Transposase, Mutator family 9 371 1.7E-128 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CJD35_RS18215 e7d1ea9638b7d061744429e8a4298813 403 Pfam PF00872 Transposase, Mutator family 9 371 1.7E-128 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CJD35_RS21670 e7d1ea9638b7d061744429e8a4298813 403 Pfam PF00872 Transposase, Mutator family 9 371 1.7E-128 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CJD35_RS08695 e7d1ea9638b7d061744429e8a4298813 403 Pfam PF00872 Transposase, Mutator family 9 371 1.7E-128 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CJD35_RS14190 7281723dca68b1ffcceb3b7ac8a03eb0 246 Pfam PF01478 Type IV leader peptidase family 105 211 2.6E-20 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CJD35_RS14190 7281723dca68b1ffcceb3b7ac8a03eb0 246 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 12 91 2.1E-21 T 28-03-2018 IPR010627 Peptidase A24A, N-terminal CJD35_RS14190 7281723dca68b1ffcceb3b7ac8a03eb0 246 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 170 180 3.2E-21 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CJD35_RS14190 7281723dca68b1ffcceb3b7ac8a03eb0 246 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 181 192 3.2E-21 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CJD35_RS14190 7281723dca68b1ffcceb3b7ac8a03eb0 246 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 113 130 3.2E-21 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CJD35_RS14190 7281723dca68b1ffcceb3b7ac8a03eb0 246 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 193 208 3.2E-21 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CJD35_RS14190 7281723dca68b1ffcceb3b7ac8a03eb0 246 Gene3D G3DSA:2.20.28.20 31 55 0.0076 T 28-03-2018 CJD35_RS06040 c769273e4fc4933b6cec063a122f86fd 136 Pfam PF02082 Transcriptional regulator 1 83 3.6E-21 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CJD35_RS06040 c769273e4fc4933b6cec063a122f86fd 136 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 9.6E-29 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CJD35_RS06040 c769273e4fc4933b6cec063a122f86fd 136 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 28-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CJD35_RS06040 c769273e4fc4933b6cec063a122f86fd 136 SUPERFAMILY SSF46785 2 134 3.27E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS06040 c769273e4fc4933b6cec063a122f86fd 136 Gene3D G3DSA:1.10.10.10 1 136 2.6E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS13610 d4c7e591215bd3f887bd2d3504e2c824 113 Gene3D G3DSA:3.30.1330.70 1 113 2.3E-6 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CJD35_RS13610 d4c7e591215bd3f887bd2d3504e2c824 113 SUPERFAMILY SSF103084 4 111 8.63E-9 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CJD35_RS05510 c270b98359ca6dda17ccaac7010dbfe3 400 Pfam PF13356 Arm DNA-binding domain 8 87 8.1E-17 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CJD35_RS05510 c270b98359ca6dda17ccaac7010dbfe3 400 SUPERFAMILY SSF56349 100 383 3.24E-56 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS05510 c270b98359ca6dda17ccaac7010dbfe3 400 Pfam PF00589 Phage integrase family 210 371 1.1E-17 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS05510 c270b98359ca6dda17ccaac7010dbfe3 400 Gene3D G3DSA:1.10.150.130 85 198 1.9E-16 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS05510 c270b98359ca6dda17ccaac7010dbfe3 400 Gene3D G3DSA:1.10.443.10 199 373 3.0E-20 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS05240 4bbcdf3ed5f49146bd0a7ecde57016ff 514 Pfam PF02384 N-6 DNA Methylase 160 480 2.3E-104 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CJD35_RS05240 4bbcdf3ed5f49146bd0a7ecde57016ff 514 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 299 305 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CJD35_RS05240 4bbcdf3ed5f49146bd0a7ecde57016ff 514 Pfam PF12161 HsdM N-terminal domain 11 144 9.1E-24 T 28-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CJD35_RS05240 4bbcdf3ed5f49146bd0a7ecde57016ff 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 206 220 1.9E-14 T 28-03-2018 CJD35_RS05240 4bbcdf3ed5f49146bd0a7ecde57016ff 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 182 198 1.9E-14 T 28-03-2018 CJD35_RS05240 4bbcdf3ed5f49146bd0a7ecde57016ff 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 296 308 1.9E-14 T 28-03-2018 CJD35_RS05240 4bbcdf3ed5f49146bd0a7ecde57016ff 514 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 332 356 1.9E-14 T 28-03-2018 CJD35_RS05240 4bbcdf3ed5f49146bd0a7ecde57016ff 514 SUPERFAMILY SSF53335 9 514 1.96E-138 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS05240 4bbcdf3ed5f49146bd0a7ecde57016ff 514 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 7 489 3.8E-83 T 28-03-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 CJD35_RS05240 4bbcdf3ed5f49146bd0a7ecde57016ff 514 Gene3D G3DSA:3.40.50.150 180 474 2.1E-66 T 28-03-2018 CJD35_RS07540 4950bfa8c32c81a2e3d9f6912f7b22d9 184 SUPERFAMILY SSF109854 2 175 4.39E-47 T 28-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes CJD35_RS07540 4950bfa8c32c81a2e3d9f6912f7b22d9 184 Gene3D G3DSA:1.20.120.450 1 173 8.6E-55 T 28-03-2018 CJD35_RS07540 4950bfa8c32c81a2e3d9f6912f7b22d9 184 Pfam PF09351 Domain of unknown function (DUF1993) 4 169 8.8E-46 T 28-03-2018 IPR018531 Domain of unknown function DUF1993 CJD35_RS21780 1d4ccdbff0026000f6d6795a1bfd5566 151 PRINTS PR01837 MgtC/SapB protein signature 19 38 1.4E-28 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CJD35_RS21780 1d4ccdbff0026000f6d6795a1bfd5566 151 PRINTS PR01837 MgtC/SapB protein signature 93 117 1.4E-28 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CJD35_RS21780 1d4ccdbff0026000f6d6795a1bfd5566 151 PRINTS PR01837 MgtC/SapB protein signature 66 88 1.4E-28 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CJD35_RS21780 1d4ccdbff0026000f6d6795a1bfd5566 151 PRINTS PR01837 MgtC/SapB protein signature 38 56 1.4E-28 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CJD35_RS21780 1d4ccdbff0026000f6d6795a1bfd5566 151 Pfam PF02308 MgtC family 16 139 6.6E-31 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CJD35_RS01700 9fcfab26ee921d120278a9cc678e4a82 246 Pfam PF07729 FCD domain 108 229 1.4E-19 T 28-03-2018 IPR011711 GntR, C-terminal CJD35_RS01700 9fcfab26ee921d120278a9cc678e4a82 246 SMART SM00895 108 230 4.2E-20 T 28-03-2018 IPR011711 GntR, C-terminal CJD35_RS01700 9fcfab26ee921d120278a9cc678e4a82 246 SUPERFAMILY SSF48008 106 233 2.17E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CJD35_RS01700 9fcfab26ee921d120278a9cc678e4a82 246 SMART SM00345 20 79 1.3E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS01700 9fcfab26ee921d120278a9cc678e4a82 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 79 6.4E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS01700 9fcfab26ee921d120278a9cc678e4a82 246 SUPERFAMILY SSF46785 12 83 5.45E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS01700 9fcfab26ee921d120278a9cc678e4a82 246 Gene3D G3DSA:1.20.120.530 94 243 1.9E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CJD35_RS01700 9fcfab26ee921d120278a9cc678e4a82 246 Gene3D G3DSA:1.10.10.10 4 92 2.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS08860 431dbe654496af7af380fd05c93a78a8 243 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 21 242 3.5E-80 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CJD35_RS08860 431dbe654496af7af380fd05c93a78a8 243 SUPERFAMILY SSF53335 15 239 1.08E-42 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS08860 431dbe654496af7af380fd05c93a78a8 243 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 32 47 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CJD35_RS08860 431dbe654496af7af380fd05c93a78a8 243 Gene3D G3DSA:3.40.50.150 8 242 2.0E-39 T 28-03-2018 CJD35_RS08860 431dbe654496af7af380fd05c93a78a8 243 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 242 3.3E-77 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CJD35_RS08860 431dbe654496af7af380fd05c93a78a8 243 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 12 242 35.25 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CJD35_RS11290 5c6247ee3a7083d10a6759531a6c1aec 163 SUPERFAMILY SSF52980 30 141 6.43E-16 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CJD35_RS11290 5c6247ee3a7083d10a6759531a6c1aec 163 Gene3D G3DSA:3.40.960.10 45 149 4.2E-22 T 28-03-2018 CJD35_RS11290 5c6247ee3a7083d10a6759531a6c1aec 163 Pfam PF04480 Protein of unknown function (DUF559) 34 138 2.4E-23 T 28-03-2018 IPR007569 Domain of unknown function DUF559 CJD35_RS01325 990b55abca38b25b9b9a64b6257ad8ef 131 SUPERFAMILY SSF54427 4 127 3.68E-26 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS01325 990b55abca38b25b9b9a64b6257ad8ef 131 TIGRFAM TIGR02096 TIGR02096: conserved hypothetical protein 5 131 5.7E-33 T 28-03-2018 IPR011721 Conserved hypothetical protein CHP02096 CJD35_RS01325 990b55abca38b25b9b9a64b6257ad8ef 131 Gene3D G3DSA:3.10.450.50 2 131 1.4E-25 T 28-03-2018 CJD35_RS01325 990b55abca38b25b9b9a64b6257ad8ef 131 Pfam PF12680 SnoaL-like domain 8 116 7.3E-21 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS05285 599831e837eec7c36405d3f05f108bd4 86 PIRSF PIRSF017854 1 86 2.5E-31 T 28-03-2018 IPR016704 Conjugal transfer, TrbD CJD35_RS05285 599831e837eec7c36405d3f05f108bd4 86 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 8 81 5.6E-9 T 28-03-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB CJD35_RS05285 599831e837eec7c36405d3f05f108bd4 86 ProDom PD012561 TRBD PLASMID CONJUGAL TRANSFER PRECURSOR SIGNAL MATING FORMATION PROBABLE PAIR 8 84 5.0E-4 T 28-03-2018 CJD35_RS08375 f726270b5d4e088a13cb8c44c32cd301 257 Gene3D G3DSA:1.25.40.10 121 217 4.6E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS08375 f726270b5d4e088a13cb8c44c32cd301 257 Gene3D G3DSA:1.10.150.200 37 120 6.0E-4 T 28-03-2018 CJD35_RS08375 f726270b5d4e088a13cb8c44c32cd301 257 SUPERFAMILY SSF48452 61 204 6.03E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS21980 450cf5b1bd252ba0d62fe9799882970d 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 3.6E-6 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS21980 450cf5b1bd252ba0d62fe9799882970d 135 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 3.6E-6 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS21980 450cf5b1bd252ba0d62fe9799882970d 135 Gene3D G3DSA:1.10.1660.10 2 63 2.6E-19 T 28-03-2018 CJD35_RS21980 450cf5b1bd252ba0d62fe9799882970d 135 SMART SM00422 4 78 8.1E-19 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS21980 450cf5b1bd252ba0d62fe9799882970d 135 Gene3D G3DSA:1.10.1660.10 64 135 2.7E-17 T 28-03-2018 CJD35_RS21980 450cf5b1bd252ba0d62fe9799882970d 135 SUPERFAMILY SSF46955 4 130 1.5E-27 T 28-03-2018 IPR009061 Putative DNA-binding domain CJD35_RS21980 450cf5b1bd252ba0d62fe9799882970d 135 Pfam PF09278 MerR, DNA binding 52 114 1.5E-13 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding CJD35_RS10860 49cfe91c0a1da03c41c85db3e7b37b9e 402 ProSitePatterns PS00737 Thiolases signature 2. 348 364 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CJD35_RS10860 49cfe91c0a1da03c41c85db3e7b37b9e 402 Gene3D G3DSA:3.40.47.10 279 402 2.5E-25 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS10860 49cfe91c0a1da03c41c85db3e7b37b9e 402 Pfam PF00108 Thiolase, N-terminal domain 4 227 3.5E-48 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CJD35_RS10860 49cfe91c0a1da03c41c85db3e7b37b9e 402 SUPERFAMILY SSF53901 2 279 1.82E-62 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS10860 49cfe91c0a1da03c41c85db3e7b37b9e 402 PIRSF PIRSF000429 1 402 8.0E-108 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS10860 49cfe91c0a1da03c41c85db3e7b37b9e 402 SUPERFAMILY SSF53901 280 401 7.85E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS10860 49cfe91c0a1da03c41c85db3e7b37b9e 402 Pfam PF02803 Thiolase, C-terminal domain 279 401 6.2E-40 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CJD35_RS10860 49cfe91c0a1da03c41c85db3e7b37b9e 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 400 9.3E-121 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CJD35_RS10860 49cfe91c0a1da03c41c85db3e7b37b9e 402 Gene3D G3DSA:3.40.47.10 1 148 2.3E-23 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS10860 49cfe91c0a1da03c41c85db3e7b37b9e 402 Gene3D G3DSA:3.40.47.10 149 278 6.2E-16 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS10860 49cfe91c0a1da03c41c85db3e7b37b9e 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CJD35_RS20110 b65ceb58fbd1a5f7530550da25cc9d02 251 Pfam PF14464 Prokaryotic homologs of the JAB domain 93 186 6.8E-14 T 28-03-2018 IPR028090 JAB domain, prokaryotic CJD35_RS20110 b65ceb58fbd1a5f7530550da25cc9d02 251 TIGRFAM TIGR03735 PRTRC_A: PRTRC system protein A 37 206 1.5E-42 T 28-03-2018 IPR022499 ParB-related, ThiF-related cassette, protein A CJD35_RS20110 b65ceb58fbd1a5f7530550da25cc9d02 251 SUPERFAMILY SSF102712 90 186 6.41E-8 T 28-03-2018 CJD35_RS01625 6addcc68e6ded79132793cea80ec79db 262 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 33 254 2.8E-85 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01625 6addcc68e6ded79132793cea80ec79db 262 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 81 89 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CJD35_RS01625 6addcc68e6ded79132793cea80ec79db 262 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 173 184 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CJD35_RS01625 6addcc68e6ded79132793cea80ec79db 262 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 31 135 6.3E-34 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01625 6addcc68e6ded79132793cea80ec79db 262 SUPERFAMILY SSF46548 132 260 2.09E-39 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CJD35_RS01625 6addcc68e6ded79132793cea80ec79db 262 Gene3D G3DSA:1.10.1060.10 131 262 7.0E-32 T 28-03-2018 CJD35_RS01625 6addcc68e6ded79132793cea80ec79db 262 SUPERFAMILY SSF54292 28 130 1.25E-30 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS01625 6addcc68e6ded79132793cea80ec79db 262 Gene3D G3DSA:3.10.20.30 19 130 9.6E-36 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS01625 6addcc68e6ded79132793cea80ec79db 262 Pfam PF13534 4Fe-4S dicluster domain 172 244 1.5E-9 T 28-03-2018 CJD35_RS12560 6fd4c7a1fc5626f5fe57c5379ae37c36 175 Pfam PF04093 rod shape-determining protein MreD 27 125 5.3E-7 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CJD35_RS14700 ac96045c0dbc6d5ae021ba319fe4dcf1 372 SUPERFAMILY SSF53474 57 220 1.39E-10 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS14700 ac96045c0dbc6d5ae021ba319fe4dcf1 372 Gene3D G3DSA:3.40.50.1820 100 328 1.7E-18 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS14700 ac96045c0dbc6d5ae021ba319fe4dcf1 372 Pfam PF11288 Protein of unknown function (DUF3089) 86 288 9.9E-64 T 28-03-2018 IPR021440 Protein of unknown function DUF3089 CJD35_RS14745 c4e35a06d97f946e1299d9db7bcaa141 339 SUPERFAMILY SSF51735 1 183 8.17E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS14745 c4e35a06d97f946e1299d9db7bcaa141 339 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 178 2.9E-74 T 28-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CJD35_RS14745 c4e35a06d97f946e1299d9db7bcaa141 339 Gene3D G3DSA:1.10.1040.10 64 331 4.6E-117 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS14745 c4e35a06d97f946e1299d9db7bcaa141 339 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 329 45.506 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CJD35_RS14745 c4e35a06d97f946e1299d9db7bcaa141 339 SUPERFAMILY SSF48179 184 333 1.22E-70 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS14745 c4e35a06d97f946e1299d9db7bcaa141 339 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 14 327 4.9E-130 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CJD35_RS14745 c4e35a06d97f946e1299d9db7bcaa141 339 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 8.8E-66 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CJD35_RS14745 c4e35a06d97f946e1299d9db7bcaa141 339 PIRSF PIRSF000116 203 332 1.6E-12 T 28-03-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CJD35_RS14745 c4e35a06d97f946e1299d9db7bcaa141 339 PIRSF PIRSF000116 3 206 2.3E-42 T 28-03-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CJD35_RS19085 0f0ccf33ab320d6b715a2d001e40d189 146 Gene3D G3DSA:1.10.10.60 10 127 9.4E-6 T 28-03-2018 CJD35_RS20265 0f0ccf33ab320d6b715a2d001e40d189 146 Gene3D G3DSA:1.10.10.60 10 127 9.4E-6 T 28-03-2018 CJD35_RS03330 b25a0ade772ece9b95fd2b4b7f38370a 255 Pfam PF02405 Permease MlaE 59 253 5.9E-27 T 28-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CJD35_RS17470 70826ad57ac4e910eb6b30192c70cfb2 176 SUPERFAMILY SSF53271 11 158 4.57E-19 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CJD35_RS17470 70826ad57ac4e910eb6b30192c70cfb2 176 Gene3D G3DSA:3.40.50.2020 8 163 1.4E-16 T 28-03-2018 CJD35_RS17470 70826ad57ac4e910eb6b30192c70cfb2 176 Pfam PF00156 Phosphoribosyl transferase domain 13 156 5.0E-24 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CJD35_RS11780 e8f126e4229c748fe0a71bba172d6f02 248 SUPERFAMILY SSF53335 36 215 2.22E-28 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS11780 e8f126e4229c748fe0a71bba172d6f02 248 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 44 184 7.3E-21 T 28-03-2018 IPR006342 Methyltransferase FkbM CJD35_RS11780 e8f126e4229c748fe0a71bba172d6f02 248 Pfam PF05050 Methyltransferase FkbM domain 46 217 2.9E-15 T 28-03-2018 IPR006342 Methyltransferase FkbM CJD35_RS11780 e8f126e4229c748fe0a71bba172d6f02 248 Gene3D G3DSA:3.40.50.150 27 235 3.4E-22 T 28-03-2018 CJD35_RS00875 66f8c251c787cb97bdfdefce4798e920 684 SUPERFAMILY SSF56601 291 605 2.54E-97 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS00875 66f8c251c787cb97bdfdefce4798e920 684 SUPERFAMILY SSF56601 242 264 2.54E-97 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS00875 66f8c251c787cb97bdfdefce4798e920 684 Gene3D G3DSA:1.10.3810.10 79 275 2.7E-68 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CJD35_RS00875 66f8c251c787cb97bdfdefce4798e920 684 Pfam PF00912 Transglycosylase 94 260 2.5E-60 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CJD35_RS00875 66f8c251c787cb97bdfdefce4798e920 684 Gene3D G3DSA:3.40.710.10 277 631 2.5E-88 T 28-03-2018 CJD35_RS00875 66f8c251c787cb97bdfdefce4798e920 684 Pfam PF00905 Penicillin binding protein transpeptidase domain 341 599 5.0E-26 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CJD35_RS00875 66f8c251c787cb97bdfdefce4798e920 684 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 99 603 6.4E-154 T 28-03-2018 CJD35_RS00875 66f8c251c787cb97bdfdefce4798e920 684 SUPERFAMILY SSF53955 76 282 1.57E-70 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS03245 f1f5fbb0d513135e61be4d93ca94b2b4 362 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 362 36.744 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJD35_RS03245 f1f5fbb0d513135e61be4d93ca94b2b4 362 PRINTS PR01010 Flagellar P-ring protein signature 20 35 5.5E-71 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJD35_RS03245 f1f5fbb0d513135e61be4d93ca94b2b4 362 PRINTS PR01010 Flagellar P-ring protein signature 53 68 5.5E-71 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJD35_RS03245 f1f5fbb0d513135e61be4d93ca94b2b4 362 PRINTS PR01010 Flagellar P-ring protein signature 249 261 5.5E-71 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJD35_RS03245 f1f5fbb0d513135e61be4d93ca94b2b4 362 PRINTS PR01010 Flagellar P-ring protein signature 101 118 5.5E-71 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJD35_RS03245 f1f5fbb0d513135e61be4d93ca94b2b4 362 PRINTS PR01010 Flagellar P-ring protein signature 79 98 5.5E-71 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJD35_RS03245 f1f5fbb0d513135e61be4d93ca94b2b4 362 PRINTS PR01010 Flagellar P-ring protein signature 159 177 5.5E-71 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJD35_RS03245 f1f5fbb0d513135e61be4d93ca94b2b4 362 PRINTS PR01010 Flagellar P-ring protein signature 185 203 5.5E-71 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJD35_RS03245 f1f5fbb0d513135e61be4d93ca94b2b4 362 PRINTS PR01010 Flagellar P-ring protein signature 35 50 5.5E-71 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJD35_RS03245 f1f5fbb0d513135e61be4d93ca94b2b4 362 PRINTS PR01010 Flagellar P-ring protein signature 118 136 5.5E-71 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJD35_RS03245 f1f5fbb0d513135e61be4d93ca94b2b4 362 Pfam PF02119 Flagellar P-ring protein 20 361 2.6E-125 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CJD35_RS03835 3a56eaeac0e9ac480600cc241d0ad8c0 583 Pfam PF07940 Heparinase II/III-like protein 334 577 7.7E-52 T 28-03-2018 IPR012480 Heparinase II/III-like GO:0016829 CJD35_RS12735 48852c0aef09bbaa28a7e758cf017a3a 242 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 41 225 2.9E-62 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS12735 48852c0aef09bbaa28a7e758cf017a3a 242 Pfam PF01578 Cytochrome C assembly protein 34 184 1.2E-19 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CJD35_RS12735 48852c0aef09bbaa28a7e758cf017a3a 242 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 96 116 1.1E-38 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS12735 48852c0aef09bbaa28a7e758cf017a3a 242 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 58 78 1.1E-38 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS12735 48852c0aef09bbaa28a7e758cf017a3a 242 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 41 58 1.1E-38 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS12735 48852c0aef09bbaa28a7e758cf017a3a 242 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 117 137 1.1E-38 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS12735 48852c0aef09bbaa28a7e758cf017a3a 242 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 203 227 1.1E-38 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS05365 6754416060827b82aeb8eb8787e8fc3a 363 SUPERFAMILY SSF103481 207 301 1.44E-9 T 28-03-2018 CJD35_RS05365 6754416060827b82aeb8eb8787e8fc3a 363 SUPERFAMILY SSF103481 70 155 7.98E-13 T 28-03-2018 CJD35_RS05365 6754416060827b82aeb8eb8787e8fc3a 363 Pfam PF00892 EamA-like transporter family 11 151 1.8E-19 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS05365 6754416060827b82aeb8eb8787e8fc3a 363 Pfam PF00892 EamA-like transporter family 167 296 2.7E-10 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS16730 e6e565a2ffbb73ad253e44b84be2502e 233 Gene3D G3DSA:3.40.50.300 9 233 1.8E-60 T 28-03-2018 CJD35_RS16730 e6e565a2ffbb73ad253e44b84be2502e 233 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS16730 e6e565a2ffbb73ad253e44b84be2502e 233 Pfam PF00005 ABC transporter 31 177 2.6E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS16730 e6e565a2ffbb73ad253e44b84be2502e 233 SMART SM00382 40 228 2.3E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS16730 e6e565a2ffbb73ad253e44b84be2502e 233 SUPERFAMILY SSF52540 12 231 1.02E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 Gene3D G3DSA:3.20.20.10 35 268 3.3E-60 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 412 1.8E-132 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 371 2.4E-23 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 282 8.1E-53 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 SUPERFAMILY SSF51419 26 285 2.91E-77 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 1.1E-26 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 381 403 1.1E-26 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 1.1E-26 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 301 319 1.1E-26 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 414 38.89 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 SUPERFAMILY SSF50621 256 416 5.23E-48 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 273 292 6.4E-23 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 6.4E-23 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 6.4E-23 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 371 384 6.4E-23 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 6.4E-23 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CJD35_RS07655 20b6beb5517317e5c63e913527bf4edf 421 Gene3D G3DSA:2.40.37.10 269 417 8.3E-40 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CJD35_RS07525 261e7ea5ab9d5d11bb647dbd1eb2fe03 507 Gene3D G3DSA:3.30.420.150 138 312 1.0E-34 T 28-03-2018 CJD35_RS07525 261e7ea5ab9d5d11bb647dbd1eb2fe03 507 Gene3D G3DSA:3.30.420.40 9 137 9.4E-35 T 28-03-2018 CJD35_RS07525 261e7ea5ab9d5d11bb647dbd1eb2fe03 507 Pfam PF02541 Ppx/GppA phosphatase family 49 315 1.8E-48 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CJD35_RS07525 261e7ea5ab9d5d11bb647dbd1eb2fe03 507 SUPERFAMILY SSF109604 344 502 2.7E-11 T 28-03-2018 CJD35_RS07525 261e7ea5ab9d5d11bb647dbd1eb2fe03 507 SUPERFAMILY SSF53067 25 145 2.16E-31 T 28-03-2018 CJD35_RS07525 261e7ea5ab9d5d11bb647dbd1eb2fe03 507 SUPERFAMILY SSF53067 147 317 2.17E-35 T 28-03-2018 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 308 1.1E-92 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 3.5E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 3.5E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 3.5E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 3.5E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 3.5E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 SUPERFAMILY SSF52374 4 302 4.02E-104 T 28-03-2018 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 Gene3D G3DSA:3.40.50.620 120 234 1.0E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 468 31.115 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 Gene3D G3DSA:3.40.50.620 5 119 2.7E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 Gene3D G3DSA:1.10.1160.10 235 318 8.8E-29 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 SUPERFAMILY SSF48163 303 465 1.96E-39 T 28-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 Gene3D G3DSA:1.10.10.350 375 470 9.2E-22 T 28-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 466 3.9E-150 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CJD35_RS14325 e20a648b3349244affa66ec7f6bcfae5 473 Gene3D G3DSA:1.10.8.70 321 368 2.9E-5 T 28-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CJD35_RS02395 19e8ab467f01dddc977032b810e88c53 126 Pfam PF13564 DoxX-like family 3 73 3.6E-8 T 28-03-2018 IPR032808 DoxX family CJD35_RS08930 7523cf1b55315823f05146c448441a94 384 Pfam PF01546 Peptidase family M20/M25/M40 74 375 1.5E-37 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CJD35_RS08930 7523cf1b55315823f05146c448441a94 384 Gene3D G3DSA:3.40.630.10 2 287 2.7E-59 T 28-03-2018 CJD35_RS08930 7523cf1b55315823f05146c448441a94 384 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 11 376 9.0E-113 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CJD35_RS08930 7523cf1b55315823f05146c448441a94 384 Pfam PF07687 Peptidase dimerisation domain 182 285 2.8E-19 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS08930 7523cf1b55315823f05146c448441a94 384 SUPERFAMILY SSF53187 297 376 1.91E-58 T 28-03-2018 CJD35_RS08930 7523cf1b55315823f05146c448441a94 384 SUPERFAMILY SSF53187 7 185 1.91E-58 T 28-03-2018 CJD35_RS08930 7523cf1b55315823f05146c448441a94 384 SUPERFAMILY SSF55031 186 284 5.83E-23 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS08930 7523cf1b55315823f05146c448441a94 384 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 8 379 46.501 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CJD35_RS08930 7523cf1b55315823f05146c448441a94 384 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 107 142 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CJD35_RS18880 9d8fe7c86e7511bf58599d9b62fec44d 118 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.1E-27 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS18880 9d8fe7c86e7511bf58599d9b62fec44d 118 SMART SM00411 1 91 1.2E-31 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS18880 9d8fe7c86e7511bf58599d9b62fec44d 118 Gene3D G3DSA:4.10.520.10 1 98 4.0E-28 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS18880 9d8fe7c86e7511bf58599d9b62fec44d 118 SUPERFAMILY SSF47729 1 90 1.62E-26 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CJD35_RS18880 9d8fe7c86e7511bf58599d9b62fec44d 118 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.2E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS18880 9d8fe7c86e7511bf58599d9b62fec44d 118 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.2E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS18880 9d8fe7c86e7511bf58599d9b62fec44d 118 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.2E-12 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CJD35_RS10305 10b9585f28eb6d2ae3d5b991e3e595b2 149 Hamap MF_00042 Ribonuclease H [rnhA]. 5 149 33.618 T 28-03-2018 IPR022892 Ribonuclease HI GO:0004523 CJD35_RS10305 10b9585f28eb6d2ae3d5b991e3e595b2 149 Pfam PF00075 RNase H 8 144 2.1E-49 T 28-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CJD35_RS10305 10b9585f28eb6d2ae3d5b991e3e595b2 149 Gene3D G3DSA:3.30.420.10 2 148 6.0E-50 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS10305 10b9585f28eb6d2ae3d5b991e3e595b2 149 SUPERFAMILY SSF53098 7 145 9.86E-58 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS12675 3397f13d2587f6b37b774c1478e1c942 299 SUPERFAMILY SSF55785 192 288 1.15E-8 T 28-03-2018 IPR000014 PAS domain CJD35_RS12675 3397f13d2587f6b37b774c1478e1c942 299 SUPERFAMILY SSF55785 63 167 3.14E-7 T 28-03-2018 IPR000014 PAS domain CJD35_RS12675 3397f13d2587f6b37b774c1478e1c942 299 Gene3D G3DSA:3.30.450.20 169 289 4.6E-10 T 28-03-2018 CJD35_RS12675 3397f13d2587f6b37b774c1478e1c942 299 Pfam PF08448 PAS fold 70 168 4.8E-7 T 28-03-2018 IPR013656 PAS fold-4 CJD35_RS12675 3397f13d2587f6b37b774c1478e1c942 299 SMART SM00091 181 247 2.4 T 28-03-2018 IPR000014 PAS domain CJD35_RS12675 3397f13d2587f6b37b774c1478e1c942 299 SMART SM00091 63 129 7.9E-4 T 28-03-2018 IPR000014 PAS domain CJD35_RS12675 3397f13d2587f6b37b774c1478e1c942 299 Gene3D G3DSA:3.30.450.20 61 168 4.5E-12 T 28-03-2018 CJD35_RS06490 7ee1be3fa0596fd6346e618569cb9cdd 266 Gene3D G3DSA:3.90.850.10 1 265 6.8E-42 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS06490 7ee1be3fa0596fd6346e618569cb9cdd 266 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 101 256 7.0E-6 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS06490 7ee1be3fa0596fd6346e618569cb9cdd 266 SUPERFAMILY SSF56529 2 259 4.06E-72 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS00530 f93635b96e26769773b4f3c0b03d50ab 253 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 50 236 1.1E-37 T 28-03-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain CJD35_RS01315 e8745ee61d43a6a61f6c655c180ba105 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.2E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS01315 e8745ee61d43a6a61f6c655c180ba105 291 Gene3D G3DSA:1.10.10.10 1 85 5.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS01315 e8745ee61d43a6a61f6c655c180ba105 291 Gene3D G3DSA:3.40.190.10 86 179 2.7E-16 T 28-03-2018 CJD35_RS01315 e8745ee61d43a6a61f6c655c180ba105 291 SUPERFAMILY SSF46785 1 87 4.28E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS01315 e8745ee61d43a6a61f6c655c180ba105 291 Pfam PF03466 LysR substrate binding domain 87 289 4.2E-36 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS01315 e8745ee61d43a6a61f6c655c180ba105 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS01315 e8745ee61d43a6a61f6c655c180ba105 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS01315 e8745ee61d43a6a61f6c655c180ba105 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.2E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS01315 e8745ee61d43a6a61f6c655c180ba105 291 SUPERFAMILY SSF53850 88 290 4.24E-31 T 28-03-2018 CJD35_RS01315 e8745ee61d43a6a61f6c655c180ba105 291 Gene3D G3DSA:3.40.190.10 180 268 3.3E-20 T 28-03-2018 CJD35_RS12405 391402b5695e6a399e634e3d8732076a 216 Pfam PF00805 Pentapeptide repeats (8 copies) 48 83 9.7E-12 T 28-03-2018 IPR001646 Pentapeptide repeat CJD35_RS12405 391402b5695e6a399e634e3d8732076a 216 Pfam PF00805 Pentapeptide repeats (8 copies) 139 175 2.0E-8 T 28-03-2018 IPR001646 Pentapeptide repeat CJD35_RS12405 391402b5695e6a399e634e3d8732076a 216 SUPERFAMILY SSF141571 47 189 9.81E-34 T 28-03-2018 CJD35_RS12405 391402b5695e6a399e634e3d8732076a 216 Gene3D G3DSA:2.160.10.20 126 195 4.4E-13 T 28-03-2018 CJD35_RS12405 391402b5695e6a399e634e3d8732076a 216 Gene3D G3DSA:3.30.1120.50 77 125 2.0E-13 T 28-03-2018 CJD35_RS12405 391402b5695e6a399e634e3d8732076a 216 Gene3D G3DSA:3.30.1120.50 43 76 2.1E-9 T 28-03-2018 CJD35_RS09275 10ec8d3fe534a9021b6f7f43cfacbc88 426 Gene3D G3DSA:1.20.1250.20 238 423 4.3E-9 T 28-03-2018 CJD35_RS09275 10ec8d3fe534a9021b6f7f43cfacbc88 426 Gene3D G3DSA:1.20.1250.20 1 223 1.4E-21 T 28-03-2018 CJD35_RS09275 10ec8d3fe534a9021b6f7f43cfacbc88 426 SUPERFAMILY SSF103473 8 419 5.75E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS09275 10ec8d3fe534a9021b6f7f43cfacbc88 426 Pfam PF00083 Sugar (and other) transporter 14 220 2.0E-21 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CJD35_RS06295 9f6122f3e25f2dff028ea6fd4c533322 228 Gene3D G3DSA:3.40.1080.10 2 228 3.1E-76 T 28-03-2018 CJD35_RS06295 9f6122f3e25f2dff028ea6fd4c533322 228 SUPERFAMILY SSF100950 2 220 4.31E-75 T 28-03-2018 CJD35_RS06295 9f6122f3e25f2dff028ea6fd4c533322 228 SMART SM00882 6 219 1.0E-73 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS06295 9f6122f3e25f2dff028ea6fd4c533322 228 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 218 6.0E-112 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CJD35_RS06295 9f6122f3e25f2dff028ea6fd4c533322 228 Pfam PF01144 Coenzyme A transferase 7 219 8.8E-70 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS09260 1068aedb74b8584f4a0b3855d14b9efe 891 Gene3D G3DSA:2.170.130.10 50 185 2.3E-27 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS09260 1068aedb74b8584f4a0b3855d14b9efe 891 Gene3D G3DSA:2.40.170.20 186 891 1.3E-63 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS09260 1068aedb74b8584f4a0b3855d14b9efe 891 SUPERFAMILY SSF56935 508 864 1.17E-96 T 28-03-2018 CJD35_RS09260 1068aedb74b8584f4a0b3855d14b9efe 891 SUPERFAMILY SSF56935 380 480 1.17E-96 T 28-03-2018 CJD35_RS09260 1068aedb74b8584f4a0b3855d14b9efe 891 SUPERFAMILY SSF56935 39 311 1.17E-96 T 28-03-2018 CJD35_RS09260 1068aedb74b8584f4a0b3855d14b9efe 891 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 175 1.6E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS09260 1068aedb74b8584f4a0b3855d14b9efe 891 Pfam PF00593 TonB dependent receptor 342 860 6.7E-37 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS21920 ae31211eb46fae3e0d69622e958deb05 245 Gene3D G3DSA:3.20.20.120 37 237 0.0016 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CJD35_RS02785 b58c41f1062e65ba4aada52e0d2c3176 396 Gene3D G3DSA:3.90.180.10 1 185 5.6E-47 T 28-03-2018 CJD35_RS02785 b58c41f1062e65ba4aada52e0d2c3176 396 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 8.4E-13 T 28-03-2018 IPR027399 Alcohol dehydrogenase GroES-associated CJD35_RS02785 b58c41f1062e65ba4aada52e0d2c3176 396 SUPERFAMILY SSF51735 164 351 9.73E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS02785 b58c41f1062e65ba4aada52e0d2c3176 396 SUPERFAMILY SSF50129 1 199 2.67E-54 T 28-03-2018 IPR011032 GroES-like CJD35_RS02785 b58c41f1062e65ba4aada52e0d2c3176 396 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 150 3.3E-27 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CJD35_RS02785 b58c41f1062e65ba4aada52e0d2c3176 396 Gene3D G3DSA:3.40.50.720 186 344 6.6E-29 T 28-03-2018 CJD35_RS02785 b58c41f1062e65ba4aada52e0d2c3176 396 Pfam PF00107 Zinc-binding dehydrogenase 197 265 2.1E-15 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CJD35_RS02785 b58c41f1062e65ba4aada52e0d2c3176 396 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 842 22.191 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 Gene3D G3DSA:3.90.740.10 225 407 1.2E-44 T 28-03-2018 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 Gene3D G3DSA:3.40.50.620 408 646 2.6E-60 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 Gene3D G3DSA:3.40.50.620 1 224 2.2E-72 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 419 575 1.9E-5 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 171 3.2E-22 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 656 2.4E-9 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 9 842 8.6E-303 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 405 9.8E-64 T 28-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 SUPERFAMILY SSF50677 226 413 6.7E-45 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 560 570 6.6E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 527 549 6.6E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 6.6E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 6.6E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 489 507 6.6E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 6.6E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 6.6E-45 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 Pfam PF08264 Anticodon-binding domain of tRNA 687 805 1.4E-14 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 SUPERFAMILY SSF47323 661 842 1.23E-32 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 SUPERFAMILY SSF52374 4 226 3.38E-142 T 28-03-2018 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 SUPERFAMILY SSF52374 418 666 3.38E-142 T 28-03-2018 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS05785 b5424432923bbf7aa4cced44c2dbaf2f 842 Gene3D G3DSA:1.10.730.10 647 779 3.5E-30 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CJD35_RS00055 032d15d5f83de39e145bf9d74c4ecc9e 146 SUPERFAMILY SSF47473 73 142 3.27E-8 T 28-03-2018 IPR011992 EF-hand domain pair CJD35_RS00055 032d15d5f83de39e145bf9d74c4ecc9e 146 Gene3D G3DSA:1.10.238.10 59 84 0.004 T 28-03-2018 CJD35_RS00055 032d15d5f83de39e145bf9d74c4ecc9e 146 ProSitePatterns PS00018 EF-hand calcium-binding domain. 77 89 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site CJD35_RS00055 032d15d5f83de39e145bf9d74c4ecc9e 146 Gene3D G3DSA:1.10.238.10 85 142 1.1E-8 T 28-03-2018 CJD35_RS19410 d6c0696163d9316cec299469a5cbf723 288 SUPERFAMILY SSF54675 14 118 2.65E-28 T 28-03-2018 CJD35_RS19410 d6c0696163d9316cec299469a5cbf723 288 PIRSF PIRSF006250 11 286 1.6E-84 T 28-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CJD35_RS19410 d6c0696163d9316cec299469a5cbf723 288 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 119 283 4.1E-52 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CJD35_RS19410 d6c0696163d9316cec299469a5cbf723 288 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 31 116 1.2E-21 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CJD35_RS19410 d6c0696163d9316cec299469a5cbf723 288 Gene3D G3DSA:3.20.20.70 145 274 8.1E-45 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS19410 d6c0696163d9316cec299469a5cbf723 288 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 19 283 7.0E-85 T 28-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CJD35_RS19410 d6c0696163d9316cec299469a5cbf723 288 Gene3D G3DSA:3.90.1170.20 5 144 2.6E-39 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CJD35_RS19410 d6c0696163d9316cec299469a5cbf723 288 SUPERFAMILY SSF51690 119 283 2.16E-55 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CJD35_RS08250 8b1623ea73ceaca96f3b67b6a0e5128d 360 Pfam PF01594 AI-2E family transporter 32 340 8.3E-46 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 126 140 5.8E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 248 264 5.8E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 195 214 5.8E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 303 322 5.8E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 273 288 5.8E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 157 176 5.8E-55 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 248 260 - T 28-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 SUPERFAMILY SSF51569 5 329 4.64E-135 T 28-03-2018 CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 SMART SM01004 6 329 2.6E-221 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 Gene3D G3DSA:3.20.20.70 1 331 3.4E-143 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 PIRSF PIRSF001415 1 331 3.6E-138 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CJD35_RS00515 52a8aa618d3ee26c3e9744632150580d 331 Pfam PF00490 Delta-aminolevulinic acid dehydratase 10 327 1.3E-131 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CJD35_RS05325 5f665568a1b079159a6c40accbd7765c 53 Gene3D G3DSA:1.10.10.60 6 31 0.01 T 28-03-2018 CJD35_RS05325 5f665568a1b079159a6c40accbd7765c 53 Pfam PF12728 Helix-turn-helix domain 8 53 1.4E-9 T 28-03-2018 CJD35_RS05325 5f665568a1b079159a6c40accbd7765c 53 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 52 5.5E-9 T 28-03-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 CJD35_RS14200 0176b7c2f94386063721fdf0dbeea21e 161 Pfam PF04612 Type II secretion system (T2SS), protein M 2 156 6.5E-29 T 28-03-2018 IPR007690 Type II secretion system, protein M GO:0009306 CJD35_RS14200 0176b7c2f94386063721fdf0dbeea21e 161 SUPERFAMILY SSF103054 82 157 1.44E-11 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain CJD35_RS14200 0176b7c2f94386063721fdf0dbeea21e 161 Gene3D G3DSA:3.30.1360.100 83 156 1.1E-14 T 28-03-2018 IPR023229 Type II secretion system protein M, periplasmic domain CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 161 185 1.4E-11 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.4E-11 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 122 130 1.4E-11 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 SUPERFAMILY SSF51905 2 204 1.4E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 SUPERFAMILY SSF51905 226 340 4.4E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 SUPERFAMILY SSF51905 160 198 4.4E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 Gene3D G3DSA:3.50.50.60 2 148 1.2E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 183 4.0E-30 T 28-03-2018 CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 165 183 2.6E-7 T 28-03-2018 CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 286 2.6E-7 T 28-03-2018 CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.6E-7 T 28-03-2018 CJD35_RS05505 e9649060fcae7557071efc7edcdf7955 350 Gene3D G3DSA:3.50.50.60 149 276 4.3E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS20555 bc7c71ba8417c21a3f0a505dda022aed 109 PRINTS PR00946 Mercury scavenger protein signature 93 107 4.0E-14 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CJD35_RS20555 bc7c71ba8417c21a3f0a505dda022aed 109 PRINTS PR00946 Mercury scavenger protein signature 37 48 4.0E-14 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CJD35_RS20555 bc7c71ba8417c21a3f0a505dda022aed 109 PRINTS PR00946 Mercury scavenger protein signature 48 64 4.0E-14 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CJD35_RS20555 bc7c71ba8417c21a3f0a505dda022aed 109 PRINTS PR00946 Mercury scavenger protein signature 64 79 4.0E-14 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CJD35_RS20555 bc7c71ba8417c21a3f0a505dda022aed 109 PRINTS PR00946 Mercury scavenger protein signature 79 93 4.0E-14 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CJD35_RS20555 bc7c71ba8417c21a3f0a505dda022aed 109 Gene3D G3DSA:3.30.70.100 37 108 2.7E-19 T 28-03-2018 CJD35_RS20555 bc7c71ba8417c21a3f0a505dda022aed 109 SUPERFAMILY SSF55008 38 107 1.7E-18 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CJD35_RS20555 bc7c71ba8417c21a3f0a505dda022aed 109 Pfam PF00403 Heavy-metal-associated domain 42 102 1.9E-12 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CJD35_RS09990 66d6fd8e1cb844887c2cdc3e6f2b3ed0 287 Gene3D G3DSA:3.60.21.10 2 253 3.6E-35 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS09990 66d6fd8e1cb844887c2cdc3e6f2b3ed0 287 Pfam PF00149 Calcineurin-like phosphoesterase 3 196 1.6E-15 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CJD35_RS09990 66d6fd8e1cb844887c2cdc3e6f2b3ed0 287 SUPERFAMILY SSF56300 1 242 1.36E-46 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS01070 f78c511ce43b2a020dd148bbfeff52b3 407 PIRSF PIRSF020818 1 407 6.7E-172 T 28-03-2018 IPR010915 Polyhydroxyalkanoate depolymerase CJD35_RS01070 f78c511ce43b2a020dd148bbfeff52b3 407 Pfam PF06850 PHB de-polymerase C-terminus 205 405 2.4E-90 T 28-03-2018 IPR009656 PHB de-polymerase, C-terminal CJD35_RS01070 f78c511ce43b2a020dd148bbfeff52b3 407 SUPERFAMILY SSF53474 79 403 3.16E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS01070 f78c511ce43b2a020dd148bbfeff52b3 407 Gene3D G3DSA:3.40.50.1820 74 404 2.9E-13 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS01070 f78c511ce43b2a020dd148bbfeff52b3 407 TIGRFAM TIGR01849 PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular 6 403 1.8E-163 T 28-03-2018 IPR010915 Polyhydroxyalkanoate depolymerase CJD35_RS03585 4f98bcc22dc4149356afe3be7a689347 134 Gene3D G3DSA:3.10.129.10 2 133 9.3E-27 T 28-03-2018 CJD35_RS03585 4f98bcc22dc4149356afe3be7a689347 134 Pfam PF01643 Acyl-ACP thioesterase 5 50 1.1E-5 T 28-03-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 CJD35_RS03585 4f98bcc22dc4149356afe3be7a689347 134 Pfam PF01643 Acyl-ACP thioesterase 53 131 3.5E-8 T 28-03-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 CJD35_RS03585 4f98bcc22dc4149356afe3be7a689347 134 SUPERFAMILY SSF54637 2 132 1.96E-35 T 28-03-2018 IPR029069 HotDog domain CJD35_RS15060 3021ef47d690614d8da835324d6266aa 644 Pfam PF07971 Glycosyl hydrolase family 92 424 629 2.2E-34 T 28-03-2018 IPR012939 Glycosyl hydrolase family 92 CJD35_RS15060 3021ef47d690614d8da835324d6266aa 644 Pfam PF07971 Glycosyl hydrolase family 92 232 414 7.8E-39 T 28-03-2018 IPR012939 Glycosyl hydrolase family 92 CJD35_RS15060 3021ef47d690614d8da835324d6266aa 644 Gene3D G3DSA:3.30.2080.10 506 642 2.5E-29 T 28-03-2018 CJD35_RS15060 3021ef47d690614d8da835324d6266aa 644 SUPERFAMILY SSF48208 248 619 1.36E-8 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CJD35_RS15060 3021ef47d690614d8da835324d6266aa 644 Gene3D G3DSA:1.20.1050.60 331 423 5.4E-15 T 28-03-2018 CJD35_RS15060 3021ef47d690614d8da835324d6266aa 644 Gene3D G3DSA:2.70.98.10 24 307 7.4E-54 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CJD35_RS04420 9de882307ef13c2927c95c04437be1c4 98 SMART SM00671 24 60 3.4E-5 T 28-03-2018 IPR006597 Sel1-like repeat CJD35_RS04420 9de882307ef13c2927c95c04437be1c4 98 Gene3D G3DSA:2.60.40.1180 6 98 7.4E-12 T 28-03-2018 CJD35_RS04420 9de882307ef13c2927c95c04437be1c4 98 SUPERFAMILY SSF81901 20 68 3.4E-6 T 28-03-2018 CJD35_RS05095 3425364c099340f16cc1debb6b44ac09 252 Gene3D G3DSA:1.10.10.10 171 239 7.8E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05095 3425364c099340f16cc1debb6b44ac09 252 Gene3D G3DSA:3.30.450.80 2 166 2.9E-31 T 28-03-2018 CJD35_RS05095 3425364c099340f16cc1debb6b44ac09 252 SUPERFAMILY SSF75516 6 162 5.89E-30 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CJD35_RS05095 3425364c099340f16cc1debb6b44ac09 252 SUPERFAMILY SSF46894 167 232 3.74E-14 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS05095 3425364c099340f16cc1debb6b44ac09 252 SMART SM00421 174 231 3.2E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS05095 3425364c099340f16cc1debb6b44ac09 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 219 2.0E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS05095 3425364c099340f16cc1debb6b44ac09 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 191 2.0E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS05095 3425364c099340f16cc1debb6b44ac09 252 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 207 2.0E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS05095 3425364c099340f16cc1debb6b44ac09 252 Pfam PF03472 Autoinducer binding domain 15 158 1.4E-26 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CJD35_RS05095 3425364c099340f16cc1debb6b44ac09 252 Pfam PF00196 Bacterial regulatory proteins, luxR family 176 228 3.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS11215 532f0b903e4f91e08d891a1341bf4b33 259 SUPERFAMILY SSF53448 1 258 1.94E-59 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS11215 532f0b903e4f91e08d891a1341bf4b33 259 Gene3D G3DSA:3.90.550.10 1 259 2.5E-49 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS11215 532f0b903e4f91e08d891a1341bf4b33 259 TIGRFAM TIGR02623 G1P_cyt_trans: glucose-1-phosphate cytidylyltransferase 1 258 4.8E-94 T 28-03-2018 IPR013446 Glucose-1-phosphate cytidylyltransferase GO:0047343 KEGG: 00500+2.7.7.33|KEGG: 00520+2.7.7.33|MetaCyc: PWY-5833|MetaCyc: PWY-5940 CJD35_RS11215 532f0b903e4f91e08d891a1341bf4b33 259 Pfam PF00483 Nucleotidyl transferase 5 222 8.9E-15 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CJD35_RS03440 dcdb687205bd59ac3a1a80b6ee42eee4 351 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 337 9.3E-102 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CJD35_RS03440 dcdb687205bd59ac3a1a80b6ee42eee4 351 PIRSF PIRSF002465 3 341 3.8E-119 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CJD35_RS03440 dcdb687205bd59ac3a1a80b6ee42eee4 351 SUPERFAMILY SSF53659 5 336 6.17E-99 T 28-03-2018 CJD35_RS03440 dcdb687205bd59ac3a1a80b6ee42eee4 351 Gene3D G3DSA:3.40.718.10 2 339 2.3E-101 T 28-03-2018 CJD35_RS03440 dcdb687205bd59ac3a1a80b6ee42eee4 351 Pfam PF02504 Fatty acid synthesis protein 6 328 1.4E-104 T 28-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CJD35_RS03440 dcdb687205bd59ac3a1a80b6ee42eee4 351 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 342 133.852 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CJD35_RS10415 2a85f9ddb9cb3ec8b55d7c48783f3931 568 SUPERFAMILY SSF56601 206 543 4.54E-76 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS10415 2a85f9ddb9cb3ec8b55d7c48783f3931 568 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 173 1.7E-8 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CJD35_RS10415 2a85f9ddb9cb3ec8b55d7c48783f3931 568 Pfam PF00905 Penicillin binding protein transpeptidase domain 234 534 1.1E-53 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CJD35_RS10415 2a85f9ddb9cb3ec8b55d7c48783f3931 568 Gene3D G3DSA:3.90.1310.10 41 214 8.0E-19 T 28-03-2018 CJD35_RS10415 2a85f9ddb9cb3ec8b55d7c48783f3931 568 Gene3D G3DSA:3.40.710.10 215 554 1.0E-73 T 28-03-2018 CJD35_RS10415 2a85f9ddb9cb3ec8b55d7c48783f3931 568 SUPERFAMILY SSF56519 66 195 8.11E-22 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CJD35_RS04775 d5ac718b43eeec1e84a2e5c71b518616 999 Gene3D G3DSA:2.40.170.20 169 999 6.1E-74 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS04775 d5ac718b43eeec1e84a2e5c71b518616 999 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 50 - T 28-03-2018 IPR010916 TonB box, conserved site CJD35_RS04775 d5ac718b43eeec1e84a2e5c71b518616 999 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 982 999 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CJD35_RS04775 d5ac718b43eeec1e84a2e5c71b518616 999 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 167 6.9E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS04775 d5ac718b43eeec1e84a2e5c71b518616 999 Pfam PF00593 TonB dependent receptor 409 997 9.4E-39 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS04775 d5ac718b43eeec1e84a2e5c71b518616 999 Gene3D G3DSA:2.170.130.10 34 168 1.3E-30 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS04775 d5ac718b43eeec1e84a2e5c71b518616 999 SUPERFAMILY SSF56935 417 664 7.02E-92 T 28-03-2018 CJD35_RS04775 d5ac718b43eeec1e84a2e5c71b518616 999 SUPERFAMILY SSF56935 722 768 7.02E-92 T 28-03-2018 CJD35_RS04775 d5ac718b43eeec1e84a2e5c71b518616 999 SUPERFAMILY SSF56935 314 365 7.02E-92 T 28-03-2018 CJD35_RS04775 d5ac718b43eeec1e84a2e5c71b518616 999 SUPERFAMILY SSF56935 32 229 7.02E-92 T 28-03-2018 CJD35_RS04775 d5ac718b43eeec1e84a2e5c71b518616 999 SUPERFAMILY SSF56935 811 999 7.02E-92 T 28-03-2018 CJD35_RS09115 e22840614f2f847d5155f8fc38067204 200 SUPERFAMILY SSF140478 31 185 3.4E-45 T 28-03-2018 IPR023353 LemA-like domain CJD35_RS09115 e22840614f2f847d5155f8fc38067204 200 Gene3D G3DSA:1.20.1440.20 16 198 2.5E-45 T 28-03-2018 CJD35_RS09115 e22840614f2f847d5155f8fc38067204 200 Pfam PF04011 LemA family 18 198 3.4E-55 T 28-03-2018 IPR007156 LemA CJD35_RS12160 76ba83be2b1ea570ec95a6ee047a83a8 204 Hamap MF_01398 ATP synthase subunit b [atpF]. 37 182 11.153 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CJD35_RS12160 76ba83be2b1ea570ec95a6ee047a83a8 204 Pfam PF00430 ATP synthase B/B' CF(0) 52 180 3.4E-19 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CJD35_RS01185 36af01f30f59dca5f5be6f35102d7636 203 SUPERFAMILY SSF51735 1 202 2.14E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS01185 36af01f30f59dca5f5be6f35102d7636 203 Pfam PF13460 NAD(P)H-binding 7 190 8.5E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS01185 36af01f30f59dca5f5be6f35102d7636 203 Gene3D G3DSA:3.40.50.720 1 203 1.5E-26 T 28-03-2018 CJD35_RS06570 53a5bf79e435fac2840bc8b7f9980a75 161 Pfam PF04073 Aminoacyl-tRNA editing domain 22 142 1.7E-27 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CJD35_RS06570 53a5bf79e435fac2840bc8b7f9980a75 161 Gene3D G3DSA:3.90.960.10 1 161 4.9E-32 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CJD35_RS06570 53a5bf79e435fac2840bc8b7f9980a75 161 SUPERFAMILY SSF55826 2 160 1.44E-40 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CJD35_RS02655 432c3f4912c3b1b1ab16d4f66ff693e8 226 Gene3D G3DSA:3.90.79.10 16 186 2.0E-6 T 28-03-2018 CJD35_RS17940 dcf87b3259d5bd60dbf1127e0b8200bb 158 Pfam PF11578 Protein of unknown function (DUF3237) 17 157 8.2E-25 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS17940 dcf87b3259d5bd60dbf1127e0b8200bb 158 Gene3D G3DSA:2.40.160.20 8 158 2.2E-32 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS07625 4e179196affa0ba3e3a49b6ed57991c9 62 Gene3D G3DSA:2.20.25.10 18 62 3.6E-16 T 28-03-2018 CJD35_RS07625 4e179196affa0ba3e3a49b6ed57991c9 62 Pfam PF03966 Trm112p-like protein 14 50 1.4E-6 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CJD35_RS07625 4e179196affa0ba3e3a49b6ed57991c9 62 SUPERFAMILY SSF158997 10 60 1.7E-16 T 28-03-2018 CJD35_RS22020 2b6f955a4a18cb858f311c8911d3397e 403 Gene3D G3DSA:2.40.128.130 300 401 1.1E-4 T 28-03-2018 CJD35_RS22020 2b6f955a4a18cb858f311c8911d3397e 403 Pfam PF05275 Copper resistance protein B precursor (CopB) 197 403 3.0E-88 T 28-03-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 CJD35_RS22020 2b6f955a4a18cb858f311c8911d3397e 403 Gene3D G3DSA:2.40.160.20 211 299 0.25 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS13100 e85ee387f509dd2a7eb3b3a96b3a666d 152 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 134 7.3E-32 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CJD35_RS13100 e85ee387f509dd2a7eb3b3a96b3a666d 152 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 132 1.5E-31 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CJD35_RS13100 e85ee387f509dd2a7eb3b3a96b3a666d 152 SUPERFAMILY SSF52540 21 117 1.12E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13100 e85ee387f509dd2a7eb3b3a96b3a666d 152 Gene3D G3DSA:3.40.50.300 1 152 5.7E-41 T 28-03-2018 CJD35_RS16700 f96da46ae27dc13e53c94461fcdc0283 146 Pfam PF13801 Heavy-metal resistance 11 130 9.1E-18 T 28-03-2018 IPR025961 Heavy-metal resistance protein CJD35_RS05185 7ddbf7235c4fd8a8cea351e3d809a5fc 198 SUPERFAMILY SSF51306 62 196 5.75E-25 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS05185 7ddbf7235c4fd8a8cea351e3d809a5fc 198 Gene3D G3DSA:2.10.109.10 60 198 7.1E-15 T 28-03-2018 CJD35_RS05185 7ddbf7235c4fd8a8cea351e3d809a5fc 198 Pfam PF10502 Signal peptidase, peptidase S26 60 197 8.8E-48 T 28-03-2018 IPR019533 Peptidase S26 CJD35_RS19375 04171fc872839d4d4b2bb30d66851461 870 Gene3D G3DSA:1.10.486.10 250 645 0.04 T 28-03-2018 CJD35_RS19375 04171fc872839d4d4b2bb30d66851461 870 Pfam PF01526 Tn3 transposase DDE domain 615 868 5.1E-86 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS19375 04171fc872839d4d4b2bb30d66851461 870 Pfam PF13700 Domain of unknown function (DUF4158) 31 197 5.5E-47 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CJD35_RS04525 ac150f6e72c3fa4dd6cb4b5fb3018880 306 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 41 256 1.0E-31 T 28-03-2018 IPR008775 Phytanoyl-CoA dioxygenase CJD35_RS04525 ac150f6e72c3fa4dd6cb4b5fb3018880 306 SUPERFAMILY SSF51197 28 288 6.41E-65 T 28-03-2018 CJD35_RS04525 ac150f6e72c3fa4dd6cb4b5fb3018880 306 Gene3D G3DSA:2.60.120.620 24 283 3.1E-46 T 28-03-2018 CJD35_RS04525 ac150f6e72c3fa4dd6cb4b5fb3018880 306 TIGRFAM TIGR02408 ectoine_ThpD: ectoine hydroxylase 17 288 3.8E-118 T 28-03-2018 IPR012774 Ectoine dioxygenase GO:0016706|GO:0055114 CJD35_RS01780 abcfc096fea8a890a0aa193ee77cdfc1 282 SMART SM00244 24 206 1.1E-18 T 28-03-2018 IPR001107 Band 7 domain CJD35_RS01780 abcfc096fea8a890a0aa193ee77cdfc1 282 Pfam PF01145 SPFH domain / Band 7 family 28 226 8.0E-30 T 28-03-2018 IPR001107 Band 7 domain CJD35_RS01780 abcfc096fea8a890a0aa193ee77cdfc1 282 PIRSF PIRSF005651 1 282 2.1E-70 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CJD35_RS01780 abcfc096fea8a890a0aa193ee77cdfc1 282 SUPERFAMILY SSF117892 67 203 3.53E-26 T 28-03-2018 IPR001107 Band 7 domain CJD35_RS02095 e7c07e42bfc22a9c3e71c12fba7fca78 508 Pfam PF05569 BlaR1 peptidase M56 6 267 2.1E-47 T 28-03-2018 IPR008756 Peptidase M56 CJD35_RS03415 76b13fba891b2655d4198d4c91eddb7c 622 Gene3D G3DSA:1.10.287.950 360 588 2.1E-34 T 28-03-2018 CJD35_RS03415 76b13fba891b2655d4198d4c91eddb7c 622 SUPERFAMILY SSF58104 368 619 1.7E-36 T 28-03-2018 CJD35_RS03415 76b13fba891b2655d4198d4c91eddb7c 622 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 427 588 1.5E-24 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS03415 76b13fba891b2655d4198d4c91eddb7c 622 Pfam PF05228 CHASE4 domain 59 218 2.9E-11 T 28-03-2018 IPR007892 CHASE4 CJD35_RS03415 76b13fba891b2655d4198d4c91eddb7c 622 SMART SM00283 369 609 2.3E-22 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS03415 76b13fba891b2655d4198d4c91eddb7c 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 412 1.4E-17 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS03415 76b13fba891b2655d4198d4c91eddb7c 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 489 518 1.4E-17 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS03415 76b13fba891b2655d4198d4c91eddb7c 622 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 460 487 1.4E-17 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS21910 3c81d4fb468a52869854935c996a6b93 336 SUPERFAMILY SSF52540 14 120 2.57E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21910 3c81d4fb468a52869854935c996a6b93 336 SUPERFAMILY SSF52540 148 318 2.57E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21910 3c81d4fb468a52869854935c996a6b93 336 TIGRFAM TIGR02788 VirB11: P-type DNA transfer ATPase VirB11 21 328 5.1E-115 T 28-03-2018 IPR014155 Type IV secretion system protein VirB11 GO:0005737|GO:0006810|GO:0009405 CJD35_RS21910 3c81d4fb468a52869854935c996a6b93 336 Gene3D G3DSA:3.40.50.300 118 335 2.6E-13 T 28-03-2018 CJD35_RS21910 3c81d4fb468a52869854935c996a6b93 336 Gene3D G3DSA:3.30.450.90 10 117 1.3E-24 T 28-03-2018 CJD35_RS21910 3c81d4fb468a52869854935c996a6b93 336 Pfam PF00437 Type II/IV secretion system protein 17 316 1.7E-61 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 Gene3D G3DSA:1.10.580.10 27 298 2.5E-89 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 PIRSF PIRSF001369 37 428 3.2E-166 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 PRINTS PR00143 Citrate synthase signature 241 269 2.1E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 PRINTS PR00143 Citrate synthase signature 296 316 2.1E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 PRINTS PR00143 Citrate synthase signature 379 393 2.1E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 PRINTS PR00143 Citrate synthase signature 219 234 2.1E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 PRINTS PR00143 Citrate synthase signature 165 178 2.1E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 PRINTS PR00143 Citrate synthase signature 359 375 2.1E-55 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 4.6E-227 T 28-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 411 4.6E-130 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 SUPERFAMILY SSF48256 5 428 7.46E-166 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS14330 e107511f49c1832bf0e23e08e704c34f 428 Gene3D G3DSA:1.10.580.10 339 404 5.7E-9 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CJD35_RS22290 85b2983d052e956b151d707e2d955292 310 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 123 233 1.5E-14 T 28-03-2018 IPR008775 Phytanoyl-CoA dioxygenase CJD35_RS22290 85b2983d052e956b151d707e2d955292 310 Gene3D G3DSA:2.60.120.620 21 261 2.2E-23 T 28-03-2018 CJD35_RS22290 85b2983d052e956b151d707e2d955292 310 SUPERFAMILY SSF51197 34 258 1.56E-31 T 28-03-2018 CJD35_RS15870 8aee99f1eb31719e433a6fcae63a8753 165 SUPERFAMILY SSF54427 64 164 4.7E-16 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS15870 8aee99f1eb31719e433a6fcae63a8753 165 Pfam PF07858 Limonene-1,2-epoxide hydrolase catalytic domain 60 162 1.8E-23 T 28-03-2018 IPR013100 Limonene-1,2-epoxide hydrolase CJD35_RS15870 8aee99f1eb31719e433a6fcae63a8753 165 Gene3D G3DSA:3.10.450.50 46 162 1.2E-8 T 28-03-2018 CJD35_RS00495 a7a70394dbb75e4608d92ba0277b213f 324 Gene3D G3DSA:3.40.367.20 107 307 3.9E-27 T 28-03-2018 CJD35_RS00495 a7a70394dbb75e4608d92ba0277b213f 324 Gene3D G3DSA:3.30.420.40 2 106 1.3E-11 T 28-03-2018 CJD35_RS00495 a7a70394dbb75e4608d92ba0277b213f 324 SUPERFAMILY SSF53067 3 322 3.81E-54 T 28-03-2018 CJD35_RS00495 a7a70394dbb75e4608d92ba0277b213f 324 Pfam PF02685 Glucokinase 6 323 4.1E-89 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CJD35_RS00495 a7a70394dbb75e4608d92ba0277b213f 324 TIGRFAM TIGR00749 glk: glucokinase 6 318 3.0E-73 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CJD35_RS08180 3c1a403ef3729433cd2ba0e3ef2a5b72 469 Pfam PF09856 Predicted transcriptional regulator (DUF2083) 315 464 5.0E-45 T 28-03-2018 IPR018653 Domain of unknown function DUF2083,transcriptional regulator CJD35_RS08180 3c1a403ef3729433cd2ba0e3ef2a5b72 469 SUPERFAMILY SSF47413 8 73 2.39E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS08180 3c1a403ef3729433cd2ba0e3ef2a5b72 469 SMART SM00530 14 69 4.2E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS08180 3c1a403ef3729433cd2ba0e3ef2a5b72 469 PIRSF PIRSF019251 4 469 3.2E-141 T 28-03-2018 IPR026281 HTH-type transcriptional regulator RamB GO:0006355 CJD35_RS08180 3c1a403ef3729433cd2ba0e3ef2a5b72 469 Gene3D G3DSA:1.10.260.40 1 76 1.6E-16 T 28-03-2018 CJD35_RS08180 3c1a403ef3729433cd2ba0e3ef2a5b72 469 Pfam PF06114 IrrE N-terminal-like domain 190 313 4.8E-14 T 28-03-2018 IPR010359 IrrE N-terminal-like domain CJD35_RS08180 3c1a403ef3729433cd2ba0e3ef2a5b72 469 Pfam PF01381 Helix-turn-helix 15 69 1.4E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS14805 3f63569213040cf7d5d033184e729ccf 358 Pfam PF00676 Dehydrogenase E1 component 48 346 6.4E-107 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CJD35_RS14805 3f63569213040cf7d5d033184e729ccf 358 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 40 354 1.6E-152 T 28-03-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 CJD35_RS14805 3f63569213040cf7d5d033184e729ccf 358 SUPERFAMILY SSF52518 33 356 2.4E-106 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CJD35_RS14805 3f63569213040cf7d5d033184e729ccf 358 Gene3D G3DSA:3.40.50.970 5 358 3.4E-93 T 28-03-2018 CJD35_RS11725 aff29238375dbf666ad20120a57d0eaf 282 TIGRFAM TIGR03006 pepcterm_polyde: polysaccharide deacetylase family protein, PEP-CTERM locus subfamily 4 273 6.1E-129 T 28-03-2018 IPR014344 PEP-CTERM locus, polysaccharide deactylase CJD35_RS11725 aff29238375dbf666ad20120a57d0eaf 282 Pfam PF11959 Domain of unknown function (DUF3473) 146 273 3.5E-48 T 28-03-2018 IPR022560 Domain of unknown function DUF3473 CJD35_RS11725 aff29238375dbf666ad20120a57d0eaf 282 Gene3D G3DSA:3.20.20.370 1 281 4.1E-47 T 28-03-2018 CJD35_RS11725 aff29238375dbf666ad20120a57d0eaf 282 Pfam PF01522 Polysaccharide deacetylase 36 144 3.0E-21 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CJD35_RS11725 aff29238375dbf666ad20120a57d0eaf 282 SUPERFAMILY SSF88713 7 251 2.97E-53 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CJD35_RS01540 bf93c978398a29a4d7619e6adde04d9d 242 Pfam PF08009 CDP-alcohol phosphatidyltransferase 2 188 222 6.8E-9 T 28-03-2018 IPR012616 CDP-alcohol phosphatidyltransferase, C-terminal CJD35_RS01540 bf93c978398a29a4d7619e6adde04d9d 242 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 44 66 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CJD35_RS01540 bf93c978398a29a4d7619e6adde04d9d 242 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 66 9.6E-12 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CJD35_RS04410 0fc06188517b0b5776bb8b19576bf565 154 Gene3D G3DSA:3.30.1330.40 2 152 4.7E-31 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJD35_RS04410 0fc06188517b0b5776bb8b19576bf565 154 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 5 143 4.5E-32 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJD35_RS04410 0fc06188517b0b5776bb8b19576bf565 154 SUPERFAMILY SSF55298 1 150 5.97E-53 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJD35_RS19995 939d180b6e8c8bb66c92f0708d768f34 102 Gene3D G3DSA:1.10.10.10 56 94 0.21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19995 939d180b6e8c8bb66c92f0708d768f34 102 Gene3D G3DSA:1.10.260.40 2 55 8.6E-9 T 28-03-2018 CJD35_RS19995 939d180b6e8c8bb66c92f0708d768f34 102 SMART SM00530 6 64 1.8E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CJD35_RS19995 939d180b6e8c8bb66c92f0708d768f34 102 Pfam PF13560 Helix-turn-helix domain 5 56 1.5E-7 T 28-03-2018 CJD35_RS19995 939d180b6e8c8bb66c92f0708d768f34 102 SUPERFAMILY SSF47413 4 66 7.41E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS09585 d33271b5dd521a7afedf452da1bf8360 387 Gene3D G3DSA:1.10.150.130 67 193 1.5E-11 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS09585 d33271b5dd521a7afedf452da1bf8360 387 Pfam PF00589 Phage integrase family 208 351 7.6E-12 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS09585 d33271b5dd521a7afedf452da1bf8360 387 SUPERFAMILY SSF56349 79 352 1.38E-38 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS09585 d33271b5dd521a7afedf452da1bf8360 387 Gene3D G3DSA:1.10.443.10 195 357 1.7E-17 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS13745 eb04cf49d1cce596188632fe4ce4dbf9 258 SMART SM00710 99 121 2600.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS13745 eb04cf49d1cce596188632fe4ce4dbf9 258 SMART SM00710 122 144 520.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS13745 eb04cf49d1cce596188632fe4ce4dbf9 258 SMART SM00710 204 225 1700.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS13745 eb04cf49d1cce596188632fe4ce4dbf9 258 SMART SM00710 145 166 2500.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS13745 eb04cf49d1cce596188632fe4ce4dbf9 258 SMART SM00710 168 189 6.1 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS13745 eb04cf49d1cce596188632fe4ce4dbf9 258 Gene3D G3DSA:2.160.20.10 1 246 1.4E-21 T 28-03-2018 IPR012334 Pectin lyase fold CJD35_RS13745 eb04cf49d1cce596188632fe4ce4dbf9 258 Pfam PF13229 Right handed beta helix region 102 222 1.9E-7 T 28-03-2018 CJD35_RS13745 eb04cf49d1cce596188632fe4ce4dbf9 258 SUPERFAMILY SSF51126 2 225 2.48E-20 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CJD35_RS02595 57aa04c54def47203cc782ad2487e97a 122 SUPERFAMILY SSF141371 5 77 8.44E-5 T 28-03-2018 CJD35_RS02595 57aa04c54def47203cc782ad2487e97a 122 Gene3D G3DSA:2.40.10.220 2 96 1.3E-7 T 28-03-2018 CJD35_RS02595 57aa04c54def47203cc782ad2487e97a 122 Pfam PF07238 PilZ domain 5 81 9.2E-7 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CJD35_RS02950 fbb4dc90f7e0245fad5798c348d2830f 125 Gene3D G3DSA:3.40.50.2300 1 122 2.2E-28 T 28-03-2018 CJD35_RS02950 fbb4dc90f7e0245fad5798c348d2830f 125 SMART SM00448 2 112 3.8E-22 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02950 fbb4dc90f7e0245fad5798c348d2830f 125 Pfam PF00072 Response regulator receiver domain 4 112 2.4E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02950 fbb4dc90f7e0245fad5798c348d2830f 125 SUPERFAMILY SSF52172 1 117 7.97E-31 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS21945 49cdf3d859bd146a12bea7cfc39fa46e 332 Gene3D G3DSA:3.90.1530.10 10 114 4.1E-30 T 28-03-2018 CJD35_RS21945 49cdf3d859bd146a12bea7cfc39fa46e 332 SUPERFAMILY SSF109709 108 214 2.35E-15 T 28-03-2018 CJD35_RS21945 49cdf3d859bd146a12bea7cfc39fa46e 332 Pfam PF08535 KorB domain 135 211 2.8E-5 T 28-03-2018 IPR013741 Repressor KorB domain CJD35_RS21945 49cdf3d859bd146a12bea7cfc39fa46e 332 SUPERFAMILY SSF110849 23 116 1.38E-21 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS21945 49cdf3d859bd146a12bea7cfc39fa46e 332 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 22 186 1.1E-34 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CJD35_RS21945 49cdf3d859bd146a12bea7cfc39fa46e 332 Gene3D G3DSA:1.10.10.730 115 160 2.9E-4 T 28-03-2018 CJD35_RS21945 49cdf3d859bd146a12bea7cfc39fa46e 332 SMART SM00470 23 114 6.2E-23 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS21945 49cdf3d859bd146a12bea7cfc39fa46e 332 Pfam PF02195 ParB-like nuclease domain 25 113 2.4E-20 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS18820 2775ae94dfbf5921ce57026001d6e609 152 Gene3D G3DSA:3.30.160.190 17 91 1.1E-16 T 28-03-2018 CJD35_RS18820 2775ae94dfbf5921ce57026001d6e609 152 Pfam PF04800 ETC complex I subunit conserved region 19 96 2.2E-14 T 28-03-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 CJD35_RS15185 259e1b29f2d74f7872e93bd4855fa0dc 90 Gene3D G3DSA:3.40.50.300 8 90 5.3E-26 T 28-03-2018 CJD35_RS15185 259e1b29f2d74f7872e93bd4855fa0dc 90 SUPERFAMILY SSF52540 5 85 1.3E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15185 259e1b29f2d74f7872e93bd4855fa0dc 90 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 9 86 6.4E-29 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CJD35_RS09030 a4f6ee13c194347d37fa0e205aeec44d 146 Pfam PF01220 Dehydroquinase class II 6 143 2.2E-57 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CJD35_RS09030 a4f6ee13c194347d37fa0e205aeec44d 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 142 3.0E-53 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CJD35_RS09030 a4f6ee13c194347d37fa0e205aeec44d 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 144 5.0E-57 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CJD35_RS09030 a4f6ee13c194347d37fa0e205aeec44d 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 28-03-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CJD35_RS09030 a4f6ee13c194347d37fa0e205aeec44d 146 SUPERFAMILY SSF52304 6 145 1.15E-58 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CJD35_RS09030 a4f6ee13c194347d37fa0e205aeec44d 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 65.75 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CJD35_RS09030 a4f6ee13c194347d37fa0e205aeec44d 146 PIRSF PIRSF001399 3 146 3.8E-60 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CJD35_RS09030 a4f6ee13c194347d37fa0e205aeec44d 146 Gene3D G3DSA:3.40.50.9100 2 146 5.0E-62 T 28-03-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CJD35_RS13575 084b472f10db95046c6149a2208a9ab0 84 SUPERFAMILY SSF57716 4 38 6.99E-6 T 28-03-2018 CJD35_RS13575 084b472f10db95046c6149a2208a9ab0 84 SMART SM00994 2 41 2.3E-5 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CJD35_RS13575 084b472f10db95046c6149a2208a9ab0 84 Pfam PF06689 ClpX C4-type zinc finger 4 40 2.7E-9 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CJD35_RS01115 37eec3c9839bc7b390af0d7f3222906d 462 Pfam PF02397 Bacterial sugar transferase 273 456 5.5E-64 T 28-03-2018 IPR003362 Bacterial sugar transferase CJD35_RS01115 37eec3c9839bc7b390af0d7f3222906d 462 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 45 462 1.3E-144 T 28-03-2018 IPR017464 Sugar transferase, PEP-CTERM system associated CJD35_RS01115 37eec3c9839bc7b390af0d7f3222906d 462 Gene3D G3DSA:3.40.50.20 140 232 4.4E-4 T 28-03-2018 CJD35_RS01115 37eec3c9839bc7b390af0d7f3222906d 462 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 462 1.1E-116 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CJD35_RS08945 6b767a1af5bd07d1e7cf6555648e989b 362 SMART SM00421 297 354 2.3E-4 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CJD35_RS08945 6b767a1af5bd07d1e7cf6555648e989b 362 SUPERFAMILY SSF46894 292 355 2.31E-9 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CJD35_RS08945 6b767a1af5bd07d1e7cf6555648e989b 362 Gene3D G3DSA:1.10.10.10 79 360 5.7E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS12625 38917d5a6e01911b0dce6ea0295fd7eb 297 Pfam PF01963 TraB family 33 293 5.3E-73 T 28-03-2018 IPR002816 Pheromone shutdown, TraB CJD35_RS00665 390830f77957534316bde7a62b861dd2 215 Pfam PF10090 Histidine phosphotransferase C-terminal domain 83 204 6.2E-32 T 28-03-2018 IPR018762 Histidine phosphotransferase ChpT, C-terminal CJD35_RS21230 3abf9bcaa41aa3f0b483db5115293cae 144 Gene3D G3DSA:3.90.50.10 20 142 2.7E-11 T 28-03-2018 CJD35_RS21230 3abf9bcaa41aa3f0b483db5115293cae 144 SUPERFAMILY SSF50346 55 134 5.49E-6 T 28-03-2018 IPR011033 PRC-barrel-like CJD35_RS18110 3abf9bcaa41aa3f0b483db5115293cae 144 Gene3D G3DSA:3.90.50.10 20 142 2.7E-11 T 28-03-2018 CJD35_RS18110 3abf9bcaa41aa3f0b483db5115293cae 144 SUPERFAMILY SSF50346 55 134 5.49E-6 T 28-03-2018 IPR011033 PRC-barrel-like CJD35_RS08110 c14449ec0677e576f304f7b2e6d49b8e 329 PRINTS PR00118 Beta-lactamase class A signature 254 269 4.9E-12 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CJD35_RS08110 c14449ec0677e576f304f7b2e6d49b8e 329 PRINTS PR00118 Beta-lactamase class A signature 75 92 4.9E-12 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CJD35_RS08110 c14449ec0677e576f304f7b2e6d49b8e 329 PRINTS PR00118 Beta-lactamase class A signature 201 226 4.9E-12 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CJD35_RS08110 c14449ec0677e576f304f7b2e6d49b8e 329 PRINTS PR00118 Beta-lactamase class A signature 44 68 4.9E-12 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CJD35_RS08110 c14449ec0677e576f304f7b2e6d49b8e 329 Pfam PF13354 Beta-lactamase enzyme family 63 293 2.1E-34 T 28-03-2018 CJD35_RS08110 c14449ec0677e576f304f7b2e6d49b8e 329 SUPERFAMILY SSF56601 44 171 1.83E-52 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS08110 c14449ec0677e576f304f7b2e6d49b8e 329 SUPERFAMILY SSF56601 209 320 1.83E-52 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS08110 c14449ec0677e576f304f7b2e6d49b8e 329 Gene3D G3DSA:3.40.710.10 38 320 3.7E-33 T 28-03-2018 CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 Pfam PF01019 Gamma-glutamyltranspeptidase 46 560 8.7E-145 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 SUPERFAMILY SSF56235 25 563 4.63E-157 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 34 558 8.2E-118 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 278 297 1.5E-61 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 385 403 1.5E-61 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 248 264 1.5E-61 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 147 1.5E-61 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 443 458 1.5E-61 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 468 485 1.5E-61 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 147 166 1.5E-61 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 54 79 1.5E-61 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS04650 bc1b10a3eba881fb150c8bba09bed551 566 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 407 425 1.5E-61 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS17855 02c0e2a387d584a8351f5db0d8661eb3 362 Gene3D G3DSA:2.130.10.10 17 119 9.2E-12 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS17855 02c0e2a387d584a8351f5db0d8661eb3 362 Gene3D G3DSA:2.130.10.10 120 225 3.0E-9 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS17855 02c0e2a387d584a8351f5db0d8661eb3 362 Gene3D G3DSA:2.130.10.10 226 361 7.2E-7 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS17855 02c0e2a387d584a8351f5db0d8661eb3 362 SUPERFAMILY SSF50969 25 355 5.89E-34 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CJD35_RS18010 f8f1fda45931e853212c17d6eb9d8388 660 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 23 504 7.7E-205 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CJD35_RS18010 f8f1fda45931e853212c17d6eb9d8388 660 ProSitePatterns PS01303 BCCT family of transporters signature. 323 332 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 CJD35_RS18010 f8f1fda45931e853212c17d6eb9d8388 660 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 61 505 2.0E-167 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 Gene3D G3DSA:1.10.40.30 373 431 1.2E-26 T 28-03-2018 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 PRINTS PR00149 Fumarate lyase superfamily signature 145 163 5.0E-27 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 PRINTS PR00149 Fumarate lyase superfamily signature 273 289 5.0E-27 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 PRINTS PR00149 Fumarate lyase superfamily signature 100 118 5.0E-27 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 PRINTS PR00149 Fumarate lyase superfamily signature 229 256 5.0E-27 T 28-03-2018 IPR000362 Fumarate lyase family CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 Hamap MF_00006 Argininosuccinate lyase [argH]. 1 452 41.303 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 SUPERFAMILY SSF48557 4 455 1.57E-144 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 PRINTS PR00145 Argininosuccinate lyase family signature 140 160 5.4E-63 T 28-03-2018 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 PRINTS PR00145 Argininosuccinate lyase family signature 229 253 5.4E-63 T 28-03-2018 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 PRINTS PR00145 Argininosuccinate lyase family signature 273 289 5.4E-63 T 28-03-2018 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 PRINTS PR00145 Argininosuccinate lyase family signature 308 327 5.4E-63 T 28-03-2018 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 PRINTS PR00145 Argininosuccinate lyase family signature 99 121 5.4E-63 T 28-03-2018 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 PRINTS PR00145 Argininosuccinate lyase family signature 191 207 5.4E-63 T 28-03-2018 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 Pfam PF14698 Argininosuccinate lyase C-terminal 361 430 7.9E-25 T 28-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 Gene3D G3DSA:1.20.200.10 105 372 8.3E-95 T 28-03-2018 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 Pfam PF00206 Lyase 11 298 1.3E-76 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 Gene3D G3DSA:1.10.275.10 1 104 4.5E-35 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 ProSitePatterns PS00163 Fumarate lyases signature. 273 282 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CJD35_RS07645 cbf52f00dd68f3511a229fdf6055e06f 456 TIGRFAM TIGR00838 argH: argininosuccinate lyase 1 454 6.1E-178 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CJD35_RS03145 3bab3c70ed165b62f0452ef7e34be5f9 120 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 50 66 2.1E-10 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS03145 3bab3c70ed165b62f0452ef7e34be5f9 120 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 105 118 2.1E-10 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS03145 3bab3c70ed165b62f0452ef7e34be5f9 120 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 84 100 2.1E-10 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS03145 3bab3c70ed165b62f0452ef7e34be5f9 120 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 50 119 2.6E-15 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS03145 3bab3c70ed165b62f0452ef7e34be5f9 120 Pfam PF02049 Flagellar hook-basal body complex protein FliE 37 120 1.0E-27 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS03145 3bab3c70ed165b62f0452ef7e34be5f9 120 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 15 120 15.873 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CJD35_RS08785 6c2faba8fb014621b4ef18623aef946d 391 SUPERFAMILY SSF56322 40 391 5.23E-107 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CJD35_RS08785 6c2faba8fb014621b4ef18623aef946d 391 Pfam PF00425 chorismate binding enzyme 129 384 2.8E-88 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CJD35_RS08785 6c2faba8fb014621b4ef18623aef946d 391 Gene3D G3DSA:3.60.120.10 3 391 2.7E-114 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CJD35_RS08785 6c2faba8fb014621b4ef18623aef946d 391 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 59 388 1.1E-112 T 28-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CJD35_RS08785 6c2faba8fb014621b4ef18623aef946d 391 PRINTS PR00095 Anthranilate synthase component I signature 230 243 7.6E-13 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CJD35_RS08785 6c2faba8fb014621b4ef18623aef946d 391 PRINTS PR00095 Anthranilate synthase component I signature 324 338 7.6E-13 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CJD35_RS08785 6c2faba8fb014621b4ef18623aef946d 391 PRINTS PR00095 Anthranilate synthase component I signature 244 257 7.6E-13 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CJD35_RS08785 6c2faba8fb014621b4ef18623aef946d 391 PRINTS PR00095 Anthranilate synthase component I signature 339 353 7.6E-13 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CJD35_RS06115 1aa26875c5eec42075af529e59f96a8d 405 SUPERFAMILY SSF51261 272 397 6.8E-20 T 28-03-2018 IPR011055 Duplicated hybrid motif CJD35_RS06115 1aa26875c5eec42075af529e59f96a8d 405 Pfam PF01551 Peptidase family M23 310 397 2.1E-16 T 28-03-2018 IPR016047 Peptidase M23 CJD35_RS06115 1aa26875c5eec42075af529e59f96a8d 405 Gene3D G3DSA:2.70.70.10 169 402 6.1E-24 T 28-03-2018 CJD35_RS15675 4d87afc05859e2336d740354641aa926 68 Gene3D G3DSA:3.30.70.20 1 68 2.8E-9 T 28-03-2018 CJD35_RS15675 4d87afc05859e2336d740354641aa926 68 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 9 64 5.1E-12 T 28-03-2018 CJD35_RS15675 4d87afc05859e2336d740354641aa926 68 PRINTS PR00352 3Fe-4S ferredoxin signature 20 30 6.1E-6 T 28-03-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CJD35_RS15675 4d87afc05859e2336d740354641aa926 68 PRINTS PR00352 3Fe-4S ferredoxin signature 51 63 6.1E-6 T 28-03-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CJD35_RS15675 4d87afc05859e2336d740354641aa926 68 PRINTS PR00352 3Fe-4S ferredoxin signature 9 20 6.1E-6 T 28-03-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 CJD35_RS15675 4d87afc05859e2336d740354641aa926 68 SUPERFAMILY SSF54862 6 65 1.82E-10 T 28-03-2018 CJD35_RS11860 d9c62ce0f27b127a23e1d47e64ad8561 562 SUPERFAMILY SSF52025 143 226 5.1E-7 T 28-03-2018 CJD35_RS11860 d9c62ce0f27b127a23e1d47e64ad8561 562 Gene3D G3DSA:3.40.630.10 27 544 1.2E-42 T 28-03-2018 CJD35_RS11860 d9c62ce0f27b127a23e1d47e64ad8561 562 SUPERFAMILY SSF53187 42 87 1.26E-54 T 28-03-2018 CJD35_RS11860 d9c62ce0f27b127a23e1d47e64ad8561 562 SUPERFAMILY SSF53187 296 538 1.26E-54 T 28-03-2018 CJD35_RS11860 d9c62ce0f27b127a23e1d47e64ad8561 562 Pfam PF04389 Peptidase family M28 312 528 1.5E-39 T 28-03-2018 IPR007484 Peptidase M28 CJD35_RS11860 d9c62ce0f27b127a23e1d47e64ad8561 562 Pfam PF02225 PA domain 143 236 1.1E-8 T 28-03-2018 IPR003137 PA domain CJD35_RS09570 2fd8e74b373fd4b1f4a2f229005c2f19 96 Pfam PF05135 Phage gp6-like head-tail connector protein 6 92 7.9E-15 T 28-03-2018 IPR021146 Phage gp6-like head-tail connector protein CJD35_RS08770 1ffb7cb9d98ef7f8fcdff2f42185514a 765 SUPERFAMILY SSF56935 314 765 2.62E-83 T 28-03-2018 CJD35_RS08770 1ffb7cb9d98ef7f8fcdff2f42185514a 765 SUPERFAMILY SSF56935 25 265 2.62E-83 T 28-03-2018 CJD35_RS08770 1ffb7cb9d98ef7f8fcdff2f42185514a 765 Pfam PF00593 TonB dependent receptor 445 743 5.0E-37 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS08770 1ffb7cb9d98ef7f8fcdff2f42185514a 765 Gene3D G3DSA:2.170.130.10 43 167 1.2E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS08770 1ffb7cb9d98ef7f8fcdff2f42185514a 765 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 154 3.7E-10 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS08770 1ffb7cb9d98ef7f8fcdff2f42185514a 765 Gene3D G3DSA:2.40.170.20 168 765 2.2E-60 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS12370 4d5ad61a47f6153e9927bd7a458319e8 413 SUPERFAMILY SSF48452 116 193 4.93E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS12370 4d5ad61a47f6153e9927bd7a458319e8 413 SUPERFAMILY SSF48452 335 390 4.93E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS12370 4d5ad61a47f6153e9927bd7a458319e8 413 Gene3D G3DSA:1.25.40.10 346 402 1.0E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS12370 4d5ad61a47f6153e9927bd7a458319e8 413 Gene3D G3DSA:1.10.150.200 308 345 0.16 T 28-03-2018 CJD35_RS12370 4d5ad61a47f6153e9927bd7a458319e8 413 Gene3D G3DSA:1.25.40.10 49 298 2.3E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 13 230 9.1E-57 T 28-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 236 391 34.629 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 SUPERFAMILY SSF53448 12 229 7.66E-49 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 Pfam PF02542 YgbB family 236 389 9.6E-62 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 229 4.8E-62 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 Hamap MF_01520 Bifunctional enzyme IspD/IspF [ispDF]. 10 392 42.865 T 28-03-2018 IPR026596 Bifunctional enzyme IspD/IspF KEGG: 00900+4.6.1.12+2.7.7.60|MetaCyc: PWY-7560 CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 Gene3D G3DSA:3.30.1330.50 225 391 8.6E-76 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 237 389 2.6E-63 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 109 116 - T 28-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 SUPERFAMILY SSF69765 236 390 2.22E-63 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 270 285 - T 28-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CJD35_RS14125 d6ac5fd8289d34f044c5ed22c7f801a4 395 Gene3D G3DSA:3.90.550.10 3 224 3.6E-40 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS01630 1f461a8c26198e5e9e8d9da22ca3d409 379 SUPERFAMILY SSF53756 1 340 7.22E-12 T 28-03-2018 CJD35_RS15950 41965e2b79c202debed55832a8b11800 303 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 11 282 4.2E-44 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region CJD35_RS15950 41965e2b79c202debed55832a8b11800 303 SUPERFAMILY SSF63829 4 300 9.81E-54 T 28-03-2018 CJD35_RS15950 41965e2b79c202debed55832a8b11800 303 Gene3D G3DSA:2.120.10.30 1 302 3.1E-33 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS12085 10285bca29d6453d079ac08f49612020 323 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 79 303 4.3E-22 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJD35_RS12085 10285bca29d6453d079ac08f49612020 323 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 76 314 4.7E-30 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CJD35_RS12085 10285bca29d6453d079ac08f49612020 323 SUPERFAMILY SSF111369 76 312 2.35E-21 T 28-03-2018 CJD35_RS12085 10285bca29d6453d079ac08f49612020 323 Gene3D G3DSA:3.90.1170.30 23 137 6.7E-6 T 28-03-2018 CJD35_RS12085 10285bca29d6453d079ac08f49612020 323 Gene3D G3DSA:2.40.50.100 193 276 0.014 T 28-03-2018 CJD35_RS04070 da25b4b1e63977bb46a55ab310bad2d6 245 SUPERFAMILY SSF117396 4 244 4.45E-66 T 28-03-2018 IPR002763 Protein of unknown function DUF72 CJD35_RS04070 da25b4b1e63977bb46a55ab310bad2d6 245 Pfam PF01904 Protein of unknown function DUF72 22 242 3.2E-53 T 28-03-2018 IPR002763 Protein of unknown function DUF72 CJD35_RS04070 da25b4b1e63977bb46a55ab310bad2d6 245 Gene3D G3DSA:3.20.20.410 1 245 6.4E-72 T 28-03-2018 IPR002763 Protein of unknown function DUF72 CJD35_RS12750 37205057aa310a1bec12b4a9b7b55a4a 182 ProSitePatterns PS00194 Thioredoxin family active site. 75 93 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CJD35_RS12750 37205057aa310a1bec12b4a9b7b55a4a 182 SUPERFAMILY SSF52833 41 178 1.02E-26 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS12750 37205057aa310a1bec12b4a9b7b55a4a 182 Pfam PF08534 Redoxin 44 167 3.7E-15 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CJD35_RS12750 37205057aa310a1bec12b4a9b7b55a4a 182 Gene3D G3DSA:3.40.30.10 37 182 3.9E-22 T 28-03-2018 CJD35_RS15615 8de58ac2af2957a1015fc765b48142de 129 SUPERFAMILY SSF54637 3 126 1.14E-16 T 28-03-2018 IPR029069 HotDog domain CJD35_RS15615 8de58ac2af2957a1015fc765b48142de 129 Gene3D G3DSA:3.10.129.10 2 128 1.3E-16 T 28-03-2018 CJD35_RS15615 8de58ac2af2957a1015fc765b48142de 129 Pfam PF01575 MaoC like domain 16 96 1.4E-8 T 28-03-2018 IPR002539 MaoC-like domain CJD35_RS04530 7e2228f16f10cc9c3045750dcd15d4b3 137 SUPERFAMILY SSF51182 19 125 1.8E-16 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS04530 7e2228f16f10cc9c3045750dcd15d4b3 137 Pfam PF06339 Ectoine synthase 1 126 2.7E-57 T 28-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CJD35_RS04530 7e2228f16f10cc9c3045750dcd15d4b3 137 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 117 3.0E-51 T 28-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CJD35_RS04530 7e2228f16f10cc9c3045750dcd15d4b3 137 Hamap MF_01255 L-ectoine synthase [ectC]. 1 127 34.306 T 28-03-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108|KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CJD35_RS04530 7e2228f16f10cc9c3045750dcd15d4b3 137 Gene3D G3DSA:2.60.120.10 8 128 1.6E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS17970 8f06b1f6582a824c27912d2fb3c5ab2e 719 Gene3D G3DSA:2.140.10.30 316 425 8.8E-10 T 28-03-2018 CJD35_RS17970 8f06b1f6582a824c27912d2fb3c5ab2e 719 Gene3D G3DSA:2.140.10.30 24 200 2.7E-19 T 28-03-2018 CJD35_RS17970 8f06b1f6582a824c27912d2fb3c5ab2e 719 SUPERFAMILY SSF82171 37 441 5.76E-38 T 28-03-2018 CJD35_RS17970 8f06b1f6582a824c27912d2fb3c5ab2e 719 Pfam PF00326 Prolyl oligopeptidase family 492 698 8.3E-46 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CJD35_RS17970 8f06b1f6582a824c27912d2fb3c5ab2e 719 SUPERFAMILY SSF53474 443 698 2.87E-58 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS17970 8f06b1f6582a824c27912d2fb3c5ab2e 719 Pfam PF07676 WD40-like Beta Propeller Repeat 44 73 0.13 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS17970 8f06b1f6582a824c27912d2fb3c5ab2e 719 Pfam PF07676 WD40-like Beta Propeller Repeat 83 120 2.6E-6 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS17970 8f06b1f6582a824c27912d2fb3c5ab2e 719 Gene3D G3DSA:3.40.50.1820 426 714 5.6E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS17970 8f06b1f6582a824c27912d2fb3c5ab2e 719 Gene3D G3DSA:2.140.10.30 201 315 1.0E-9 T 28-03-2018 CJD35_RS17740 c4bf35451aa64bc68795e8196967f902 475 SUPERFAMILY SSF53720 4 474 4.06E-147 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS17740 c4bf35451aa64bc68795e8196967f902 475 Gene3D G3DSA:3.40.309.10 268 457 2.0E-62 T 28-03-2018 CJD35_RS17740 c4bf35451aa64bc68795e8196967f902 475 Pfam PF00171 Aldehyde dehydrogenase family 21 472 2.0E-147 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS17740 c4bf35451aa64bc68795e8196967f902 475 Gene3D G3DSA:3.40.605.10 2 267 1.4E-81 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS07935 e5b0f785309538e25b3158dfb429bddd 424 Pfam PF07690 Major Facilitator Superfamily 4 365 1.2E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS07935 e5b0f785309538e25b3158dfb429bddd 424 Gene3D G3DSA:1.20.1250.20 204 400 3.1E-14 T 28-03-2018 CJD35_RS07935 e5b0f785309538e25b3158dfb429bddd 424 SUPERFAMILY SSF103473 2 397 2.09E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS07935 e5b0f785309538e25b3158dfb429bddd 424 Gene3D G3DSA:1.20.1250.20 1 199 8.3E-32 T 28-03-2018 CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 Pfam PF00106 short chain dehydrogenase 8 194 3.0E-56 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 192 1.0E-4 T 28-03-2018 CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 Gene3D G3DSA:3.40.50.720 1 239 2.7E-59 T 28-03-2018 CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 SUPERFAMILY SSF51735 2 230 8.83E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12495 fdf5384bd59c89adf8db60e5e8699493 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.1E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS11640 6a238c0b160b5ffc08ec940dac70e294 71 Gene3D G3DSA:2.40.50.140 1 71 3.5E-23 T 28-03-2018 CJD35_RS11640 6a238c0b160b5ffc08ec940dac70e294 71 PIRSF PIRSF002599 1 71 7.5E-20 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CJD35_RS11640 6a238c0b160b5ffc08ec940dac70e294 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 7.5E-21 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS11640 6a238c0b160b5ffc08ec940dac70e294 71 SMART SM00357 5 70 4.0E-19 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CJD35_RS11640 6a238c0b160b5ffc08ec940dac70e294 71 SUPERFAMILY SSF50249 4 67 3.43E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS11640 6a238c0b160b5ffc08ec940dac70e294 71 PRINTS PR00050 Cold shock protein signature 27 36 2.4E-10 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS11640 6a238c0b160b5ffc08ec940dac70e294 71 PRINTS PR00050 Cold shock protein signature 6 21 2.4E-10 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS11640 6a238c0b160b5ffc08ec940dac70e294 71 PRINTS PR00050 Cold shock protein signature 42 60 2.4E-10 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CJD35_RS01035 c1317e8d10563a5c3663b23b7ad36ec1 61 Pfam PF07043 Protein of unknown function (DUF1328) 6 44 5.8E-10 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CJD35_RS01035 c1317e8d10563a5c3663b23b7ad36ec1 61 PIRSF PIRSF036466 1 55 3.8E-13 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CJD35_RS01035 c1317e8d10563a5c3663b23b7ad36ec1 61 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 1 56 16.351 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CJD35_RS17280 627596fece61da220e7f4a5558c79cda 448 Pfam PF00654 Voltage gated chloride channel 72 409 5.4E-65 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CJD35_RS17280 627596fece61da220e7f4a5558c79cda 448 SUPERFAMILY SSF81340 20 428 5.23E-77 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CJD35_RS17280 627596fece61da220e7f4a5558c79cda 448 PRINTS PR00762 Chloride channel signature 84 101 4.8E-23 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CJD35_RS17280 627596fece61da220e7f4a5558c79cda 448 PRINTS PR00762 Chloride channel signature 166 185 4.8E-23 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CJD35_RS17280 627596fece61da220e7f4a5558c79cda 448 PRINTS PR00762 Chloride channel signature 359 375 4.8E-23 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CJD35_RS17280 627596fece61da220e7f4a5558c79cda 448 PRINTS PR00762 Chloride channel signature 377 396 4.8E-23 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CJD35_RS17280 627596fece61da220e7f4a5558c79cda 448 PRINTS PR00762 Chloride channel signature 330 350 4.8E-23 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CJD35_RS17280 627596fece61da220e7f4a5558c79cda 448 Gene3D G3DSA:1.10.3080.10 7 422 5.9E-69 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CJD35_RS05190 63651233dc8d511f3c5ea98a8a369d7f 217 Pfam PF01464 Transglycosylase SLT domain 36 142 2.3E-15 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CJD35_RS05190 63651233dc8d511f3c5ea98a8a369d7f 217 SUPERFAMILY SSF53955 27 159 1.49E-32 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS05190 63651233dc8d511f3c5ea98a8a369d7f 217 Gene3D G3DSA:1.10.530.10 7 162 2.7E-34 T 28-03-2018 CJD35_RS16385 d6ca7f3997d74ebb9e003b8ab0b7112d 289 Pfam PF02219 Methylenetetrahydrofolate reductase 46 230 2.1E-7 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CJD35_RS16385 d6ca7f3997d74ebb9e003b8ab0b7112d 289 Gene3D G3DSA:3.20.20.220 12 288 7.8E-47 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CJD35_RS16385 d6ca7f3997d74ebb9e003b8ab0b7112d 289 SUPERFAMILY SSF51730 21 285 5.3E-46 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CJD35_RS05700 e7c733c83643f96a5a7354f456c2912b 160 Gene3D G3DSA:3.10.129.10 10 149 2.0E-19 T 28-03-2018 CJD35_RS05700 e7c733c83643f96a5a7354f456c2912b 160 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 45 145 5.6E-10 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CJD35_RS05700 e7c733c83643f96a5a7354f456c2912b 160 Pfam PF03061 Thioesterase superfamily 64 137 1.4E-9 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CJD35_RS05700 e7c733c83643f96a5a7354f456c2912b 160 SUPERFAMILY SSF54637 21 147 1.38E-22 T 28-03-2018 IPR029069 HotDog domain CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 Pfam PF03704 Bacterial transcriptional activator domain 256 314 8.0E-7 T 28-03-2018 IPR005158 Bacterial transcriptional activator domain CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 Gene3D G3DSA:1.25.40.10 23 64 0.026 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 Pfam PF13432 Tetratricopeptide repeat 153 214 4.8E-7 T 28-03-2018 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 Pfam PF13432 Tetratricopeptide repeat 54 113 1.2E-5 T 28-03-2018 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 SMART SM00028 182 215 29.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 SMART SM00028 250 283 50.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 SMART SM00028 82 115 79.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 SMART SM00028 284 317 0.015 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 SMART SM00028 359 392 330.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 Gene3D G3DSA:1.25.40.10 65 148 3.1E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 Gene3D G3DSA:3.40.50.300 425 657 1.2E-36 T 28-03-2018 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 SUPERFAMILY SSF48452 29 214 3.8E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 Pfam PF13469 Sulfotransferase family 429 621 2.7E-40 T 28-03-2018 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 SUPERFAMILY SSF52540 426 656 3.38E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 Gene3D G3DSA:1.25.40.10 149 316 2.4E-28 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 SUPERFAMILY SSF48452 153 321 2.58E-21 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS17835 7f269a3d25baecc3ec551225488d2424 676 Gene3D G3DSA:1.25.40.120 317 404 0.02 T 28-03-2018 CJD35_RS08000 c02ab4458a3bf02a823caebe75245eaa 477 Pfam PF16347 Domain of unknown function (DUF4976) 379 464 2.5E-7 T 28-03-2018 IPR032506 Domain of unknown function DUF4976 Reactome: R-HSA-2024096 CJD35_RS08000 c02ab4458a3bf02a823caebe75245eaa 477 SUPERFAMILY SSF53649 28 463 7.26E-113 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJD35_RS08000 c02ab4458a3bf02a823caebe75245eaa 477 ProSitePatterns PS00149 Sulfatases signature 2. 120 131 - T 28-03-2018 IPR024607 Sulfatase, conserved site CJD35_RS08000 c02ab4458a3bf02a823caebe75245eaa 477 Gene3D G3DSA:3.40.720.10 31 393 2.0E-83 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJD35_RS08000 c02ab4458a3bf02a823caebe75245eaa 477 Pfam PF00884 Sulfatase 31 375 2.4E-55 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CJD35_RS08000 c02ab4458a3bf02a823caebe75245eaa 477 Gene3D G3DSA:3.30.1120.10 394 466 1.4E-12 T 28-03-2018 CJD35_RS08355 9fb7cbec25bad759dc5532d931fa6534 455 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 104 402 3.2E-59 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS08355 9fb7cbec25bad759dc5532d931fa6534 455 SUPERFAMILY SSF55120 180 409 6.72E-61 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS08355 9fb7cbec25bad759dc5532d931fa6534 455 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 234 248 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS08355 9fb7cbec25bad759dc5532d931fa6534 455 Gene3D G3DSA:3.10.290.10 93 163 2.0E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS08355 9fb7cbec25bad759dc5532d931fa6534 455 Gene3D G3DSA:3.30.2350.10 185 408 2.0E-64 T 28-03-2018 CJD35_RS08355 9fb7cbec25bad759dc5532d931fa6534 455 Pfam PF00849 RNA pseudouridylate synthase 196 345 4.5E-35 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CJD35_RS07785 28f729af4a2db076025e1584421ca6d8 297 SUPERFAMILY SSF47823 4 95 2.35E-9 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CJD35_RS07785 28f729af4a2db076025e1584421ca6d8 297 SUPERFAMILY SSF56349 107 295 2.94E-45 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS07785 28f729af4a2db076025e1584421ca6d8 297 Gene3D G3DSA:1.10.150.130 3 121 7.1E-14 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS07785 28f729af4a2db076025e1584421ca6d8 297 Gene3D G3DSA:1.10.443.10 122 297 9.6E-41 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS07785 28f729af4a2db076025e1584421ca6d8 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 297 47.804 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CJD35_RS07785 28f729af4a2db076025e1584421ca6d8 297 Pfam PF00589 Phage integrase family 120 283 3.7E-32 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS07785 28f729af4a2db076025e1584421ca6d8 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 90 1.4E-14 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CJD35_RS11400 e189792358216431eb745764bcb65ae9 769 Pfam PF13550 Putative phage tail protein 314 462 4.0E-5 T 28-03-2018 IPR032876 Tip attachment protein J CJD35_RS00450 d1aaf8004faf8c8c1bf710d316ac5b1f 231 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 17 231 26.249 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CJD35_RS00450 d1aaf8004faf8c8c1bf710d316ac5b1f 231 Gene3D G3DSA:3.40.50.150 24 231 2.7E-19 T 28-03-2018 CJD35_RS00450 d1aaf8004faf8c8c1bf710d316ac5b1f 231 Pfam PF02390 Putative methyltransferase 56 224 1.8E-37 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CJD35_RS00450 d1aaf8004faf8c8c1bf710d316ac5b1f 231 SUPERFAMILY SSF53335 56 229 2.16E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS14835 4836ce85f95840712c6c0066786900b0 184 Gene3D G3DSA:1.10.287.700 1 90 5.6E-5 T 28-03-2018 CJD35_RS14835 4836ce85f95840712c6c0066786900b0 184 Gene3D G3DSA:1.10.287.700 99 182 0.0014 T 28-03-2018 CJD35_RS14835 4836ce85f95840712c6c0066786900b0 184 Pfam PF05957 Bacterial protein of unknown function (DUF883) 3 91 1.7E-12 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB CJD35_RS11220 dd22a6246ccef75d7c40b22025d7774e 357 Pfam PF16363 GDP-mannose 4,6 dehydratase 15 325 1.5E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS11220 dd22a6246ccef75d7c40b22025d7774e 357 TIGRFAM TIGR02622 CDP_4_6_dhtase: CDP-glucose 4,6-dehydratase 7 349 2.4E-124 T 28-03-2018 IPR013445 CDP-glucose 4,6-dehydratase KEGG: 00520+4.2.1.45|MetaCyc: PWY-5833 CJD35_RS11220 dd22a6246ccef75d7c40b22025d7774e 357 Gene3D G3DSA:3.90.25.10 199 353 5.8E-28 T 28-03-2018 CJD35_RS11220 dd22a6246ccef75d7c40b22025d7774e 357 SUPERFAMILY SSF51735 6 339 2.78E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS11220 dd22a6246ccef75d7c40b22025d7774e 357 Gene3D G3DSA:3.40.50.720 3 198 4.3E-28 T 28-03-2018 CJD35_RS20285 7a062469ce79342ff0594a1287eb2aee 63 Gene3D G3DSA:4.10.240.10 9 63 3.7E-4 T 28-03-2018 IPR001138 Zn(2)-C6 fungal-type DNA-binding domain GO:0000981|GO:0005634|GO:0006355|GO:0008270 CJD35_RS20285 7a062469ce79342ff0594a1287eb2aee 63 Pfam PF06945 Protein of unknown function (DUF1289) 3 49 7.5E-16 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 CJD35_RS19105 7a062469ce79342ff0594a1287eb2aee 63 Gene3D G3DSA:4.10.240.10 9 63 3.7E-4 T 28-03-2018 IPR001138 Zn(2)-C6 fungal-type DNA-binding domain GO:0000981|GO:0005634|GO:0006355|GO:0008270 CJD35_RS19105 7a062469ce79342ff0594a1287eb2aee 63 Pfam PF06945 Protein of unknown function (DUF1289) 3 49 7.5E-16 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 CJD35_RS01440 ad213bd5e50c73e65995cd770b246055 314 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 313 2.5E-121 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS01440 ad213bd5e50c73e65995cd770b246055 314 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 9.2E-59 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS01440 ad213bd5e50c73e65995cd770b246055 314 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 314 45.871 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS01440 ad213bd5e50c73e65995cd770b246055 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 2.3E-41 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS01440 ad213bd5e50c73e65995cd770b246055 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 2.3E-41 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS01440 ad213bd5e50c73e65995cd770b246055 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 2.3E-41 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS01440 ad213bd5e50c73e65995cd770b246055 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 2.3E-41 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS01440 ad213bd5e50c73e65995cd770b246055 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 2.3E-41 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS01440 ad213bd5e50c73e65995cd770b246055 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 2.3E-41 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CJD35_RS01440 ad213bd5e50c73e65995cd770b246055 314 SUPERFAMILY SSF52096 5 313 8.75E-93 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS01440 ad213bd5e50c73e65995cd770b246055 314 Gene3D G3DSA:3.90.226.10 2 285 5.6E-62 T 28-03-2018 CJD35_RS05965 4bf59ab27bcdad1634a50b4a5bb3d4bf 369 Gene3D G3DSA:3.30.750.24 1 161 3.4E-4 T 28-03-2018 IPR002645 STAS domain CJD35_RS05965 4bf59ab27bcdad1634a50b4a5bb3d4bf 369 Pfam PF02405 Permease MlaE 152 361 7.2E-72 T 28-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CJD35_RS05965 4bf59ab27bcdad1634a50b4a5bb3d4bf 369 SUPERFAMILY SSF52091 9 90 1.1E-5 T 28-03-2018 IPR002645 STAS domain CJD35_RS05965 4bf59ab27bcdad1634a50b4a5bb3d4bf 369 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 140 363 6.7E-64 T 28-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CJD35_RS10870 0e1c546a556de41ba0b1ccc48dce339d 199 Pfam PF12804 MobA-like NTP transferase domain 8 170 2.1E-30 T 28-03-2018 IPR025877 MobA-like NTP transferase CJD35_RS10870 0e1c546a556de41ba0b1ccc48dce339d 199 Gene3D G3DSA:3.90.550.10 1 194 1.8E-25 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS10870 0e1c546a556de41ba0b1ccc48dce339d 199 SUPERFAMILY SSF53448 5 190 1.71E-22 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS18910 5a342c465cdac854c5c77951a223287c 133 Pfam PF05656 Protein of unknown function (DUF805) 9 130 2.0E-15 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CJD35_RS08595 44f76f9e332b1e4e53d3e19e1e0b668d 87 Pfam PF00366 Ribosomal protein S17 8 75 1.3E-29 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08595 44f76f9e332b1e4e53d3e19e1e0b668d 87 SUPERFAMILY SSF50249 3 80 6.85E-30 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS08595 44f76f9e332b1e4e53d3e19e1e0b668d 87 Gene3D G3DSA:2.40.50.140 1 87 2.0E-28 T 28-03-2018 CJD35_RS08595 44f76f9e332b1e4e53d3e19e1e0b668d 87 PRINTS PR00973 Ribosomal protein S17 family signature 64 71 1.7E-10 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08595 44f76f9e332b1e4e53d3e19e1e0b668d 87 PRINTS PR00973 Ribosomal protein S17 family signature 54 64 1.7E-10 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08595 44f76f9e332b1e4e53d3e19e1e0b668d 87 PRINTS PR00973 Ribosomal protein S17 family signature 22 45 1.7E-10 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08595 44f76f9e332b1e4e53d3e19e1e0b668d 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 74 1.0E-18 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08595 44f76f9e332b1e4e53d3e19e1e0b668d 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 78 23.678 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08595 44f76f9e332b1e4e53d3e19e1e0b668d 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 3 73 1.1E-33 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS03915 5a72323202d1fa62826a046469f46ed5 204 SUPERFAMILY SSF63380 92 198 4.93E-27 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CJD35_RS03915 5a72323202d1fa62826a046469f46ed5 204 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 199 5.7E-51 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS03915 5a72323202d1fa62826a046469f46ed5 204 PIRSF PIRSF000498 1 204 2.1E-64 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS03915 5a72323202d1fa62826a046469f46ed5 204 Gene3D G3DSA:2.40.30.20 92 194 7.9E-30 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS03915 5a72323202d1fa62826a046469f46ed5 204 Pfam PF00677 Lumazine binding domain 98 187 3.6E-20 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS03915 5a72323202d1fa62826a046469f46ed5 204 Pfam PF00677 Lumazine binding domain 3 85 7.8E-18 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CJD35_RS03915 5a72323202d1fa62826a046469f46ed5 204 Gene3D G3DSA:2.40.30.20 1 87 1.0E-22 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS03915 5a72323202d1fa62826a046469f46ed5 204 SUPERFAMILY SSF63380 1 91 1.19E-22 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CJD35_RS00595 90d629de90acbf55817ce6ad02a4ced5 200 Gene3D G3DSA:1.10.10.60 53 166 2.1E-6 T 28-03-2018 CJD35_RS00595 90d629de90acbf55817ce6ad02a4ced5 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 5.6E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS00595 90d629de90acbf55817ce6ad02a4ced5 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 3.9E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS00595 90d629de90acbf55817ce6ad02a4ced5 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 3.9E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS00595 90d629de90acbf55817ce6ad02a4ced5 200 Gene3D G3DSA:1.10.10.60 4 52 6.0E-16 T 28-03-2018 CJD35_RS00595 90d629de90acbf55817ce6ad02a4ced5 200 SUPERFAMILY SSF46689 12 81 6.14E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS08995 b99cb113553b9678a9b091cd3ccfa671 174 Gene3D G3DSA:3.40.50.360 44 121 1.5E-4 T 28-03-2018 IPR029039 Flavoprotein-like domain CJD35_RS08995 b99cb113553b9678a9b091cd3ccfa671 174 Gene3D G3DSA:1.10.10.10 122 167 5.9E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS08995 b99cb113553b9678a9b091cd3ccfa671 174 Pfam PF02631 RecX family 53 163 2.4E-15 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CJD35_RS11665 a97ef47be340dfeeceec62d86f7e71ff 290 Pfam PF01841 Transglutaminase-like superfamily 119 220 1.3E-22 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS11665 a97ef47be340dfeeceec62d86f7e71ff 290 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 80 1.3E-9 T 28-03-2018 IPR013589 Bacterial transglutaminase-like, N-terminal CJD35_RS11665 a97ef47be340dfeeceec62d86f7e71ff 290 SMART SM00460 158 222 2.4E-15 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS11665 a97ef47be340dfeeceec62d86f7e71ff 290 Gene3D G3DSA:3.90.260.10 147 223 3.7E-6 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS11665 a97ef47be340dfeeceec62d86f7e71ff 290 SUPERFAMILY SSF54001 100 249 2.24E-36 T 28-03-2018 CJD35_RS02560 cedcb247ee6d153a846fed24a2c64e00 189 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 59 7.4E-9 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS02560 cedcb247ee6d153a846fed24a2c64e00 189 Gene3D G3DSA:1.10.150.120 74 176 1.7E-24 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS02560 cedcb247ee6d153a846fed24a2c64e00 189 Gene3D G3DSA:3.10.20.30 1 73 3.7E-25 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS02560 cedcb247ee6d153a846fed24a2c64e00 189 SUPERFAMILY SSF54292 2 77 3.01E-23 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS02560 cedcb247ee6d153a846fed24a2c64e00 189 SUPERFAMILY SSF47741 72 155 1.96E-25 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS02560 cedcb247ee6d153a846fed24a2c64e00 189 Pfam PF01799 [2Fe-2S] binding domain 72 142 4.5E-23 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS02560 cedcb247ee6d153a846fed24a2c64e00 189 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 38 46 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CJD35_RS14465 a0050cf5922efc6eef213ee696493e7a 366 Pfam PF01471 Putative peptidoglycan binding domain 68 120 1.3E-9 T 28-03-2018 IPR002477 Peptidoglycan binding-like CJD35_RS14465 a0050cf5922efc6eef213ee696493e7a 366 SUPERFAMILY SSF141523 231 362 5.23E-26 T 28-03-2018 CJD35_RS14465 a0050cf5922efc6eef213ee696493e7a 366 Pfam PF03734 L,D-transpeptidase catalytic domain 232 360 2.2E-20 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CJD35_RS14465 a0050cf5922efc6eef213ee696493e7a 366 Gene3D G3DSA:1.10.101.10 62 123 2.4E-8 T 28-03-2018 IPR002477 Peptidoglycan binding-like CJD35_RS14465 a0050cf5922efc6eef213ee696493e7a 366 Gene3D G3DSA:2.40.440.10 224 364 7.2E-29 T 28-03-2018 CJD35_RS14465 a0050cf5922efc6eef213ee696493e7a 366 SUPERFAMILY SSF47090 64 121 1.13E-9 T 28-03-2018 IPR002477 Peptidoglycan binding-like CJD35_RS13470 40bb62277e12b24fdb78041c65f351d1 255 Gene3D G3DSA:1.10.150.130 2 81 1.7E-9 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS13470 40bb62277e12b24fdb78041c65f351d1 255 Pfam PF00589 Phage integrase family 85 240 3.6E-26 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS13470 40bb62277e12b24fdb78041c65f351d1 255 Gene3D G3DSA:1.10.443.10 82 255 6.5E-34 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS13470 40bb62277e12b24fdb78041c65f351d1 255 SUPERFAMILY SSF56349 5 248 2.94E-42 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS14295 c6c67fd423a6797a91514837196e11bb 330 SUPERFAMILY SSF47648 9 64 5.49E-10 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CJD35_RS14295 c6c67fd423a6797a91514837196e11bb 330 Pfam PF02885 Glycosyl transferase family, helical bundle domain 10 60 4.0E-10 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CJD35_RS14295 c6c67fd423a6797a91514837196e11bb 330 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 10 328 6.5E-108 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CJD35_RS14295 c6c67fd423a6797a91514837196e11bb 330 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 2 329 34.329 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CJD35_RS14295 c6c67fd423a6797a91514837196e11bb 330 Pfam PF00591 Glycosyl transferase family, a/b domain 70 319 4.6E-84 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CJD35_RS14295 c6c67fd423a6797a91514837196e11bb 330 SUPERFAMILY SSF52418 70 330 7.72E-87 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CJD35_RS14295 c6c67fd423a6797a91514837196e11bb 330 Gene3D G3DSA:1.20.970.10 7 64 1.1E-11 T 28-03-2018 CJD35_RS14295 c6c67fd423a6797a91514837196e11bb 330 Gene3D G3DSA:3.40.1030.10 65 330 7.0E-97 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CJD35_RS10210 e5e024c8b27778974a797c9ec242ed2d 509 Gene3D G3DSA:2.70.70.10 293 468 4.2E-46 T 28-03-2018 CJD35_RS10210 e5e024c8b27778974a797c9ec242ed2d 509 SUPERFAMILY SSF51261 218 462 1.88E-60 T 28-03-2018 IPR011055 Duplicated hybrid motif CJD35_RS10210 e5e024c8b27778974a797c9ec242ed2d 509 Pfam PF01551 Peptidase family M23 366 460 7.6E-34 T 28-03-2018 IPR016047 Peptidase M23 CJD35_RS16425 4858fcf2df57aadc3f84f665d7ecb444 129 SUPERFAMILY SSF54427 8 119 8.07E-26 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS16425 4858fcf2df57aadc3f84f665d7ecb444 129 Gene3D G3DSA:3.10.450.50 2 129 6.5E-29 T 28-03-2018 CJD35_RS16425 4858fcf2df57aadc3f84f665d7ecb444 129 Pfam PF12680 SnoaL-like domain 17 111 3.1E-17 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS02925 8d785ad1807ecb790e7f6e35d70f91ab 129 Gene3D G3DSA:3.10.450.50 1 126 1.9E-10 T 28-03-2018 CJD35_RS02925 8d785ad1807ecb790e7f6e35d70f91ab 129 SUPERFAMILY SSF54427 8 123 3.38E-10 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS02925 8d785ad1807ecb790e7f6e35d70f91ab 129 Pfam PF14534 Domain of unknown function (DUF4440) 9 120 4.6E-15 T 28-03-2018 IPR027843 Domain of unknown function DUF4440 CJD35_RS00860 ade163878501bf1126b10c009c9fec58 187 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 181 2.9E-40 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CJD35_RS00860 ade163878501bf1126b10c009c9fec58 187 PIRSF PIRSF000847 1 187 1.2E-39 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CJD35_RS00860 ade163878501bf1126b10c009c9fec58 187 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 53 75 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CJD35_RS00860 ade163878501bf1126b10c009c9fec58 187 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 75 1.1E-13 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CJD35_RS15620 654c4ca85b098505d4237f01f8d1d040 174 SUPERFAMILY SSF54593 2 153 7.34E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS15620 654c4ca85b098505d4237f01f8d1d040 174 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 104 3.2E-15 T 28-03-2018 CJD35_RS15620 654c4ca85b098505d4237f01f8d1d040 174 Gene3D G3DSA:3.10.180.10 1 155 1.1E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS07215 16715b760ce890aa56d3de18222f8aa3 173 Pfam PF07811 TadE-like protein 14 51 7.6E-7 T 28-03-2018 IPR012495 TadE-like CJD35_RS11005 80e55393dc9a7830b92a094db7b92dbe 120 Pfam PF04480 Protein of unknown function (DUF559) 8 110 2.4E-26 T 28-03-2018 IPR007569 Domain of unknown function DUF559 CJD35_RS11005 80e55393dc9a7830b92a094db7b92dbe 120 Gene3D G3DSA:3.40.960.10 19 120 8.7E-23 T 28-03-2018 CJD35_RS11005 80e55393dc9a7830b92a094db7b92dbe 120 SUPERFAMILY SSF52980 11 116 1.23E-15 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CJD35_RS05980 ac9fc48b72037297b2ac4614a88f6e1b 313 SUPERFAMILY SSF52283 8 132 5.48E-27 T 28-03-2018 CJD35_RS05980 ac9fc48b72037297b2ac4614a88f6e1b 313 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 280 5.5E-47 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CJD35_RS05980 ac9fc48b72037297b2ac4614a88f6e1b 313 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 34 311 3.3E-27 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CJD35_RS05980 ac9fc48b72037297b2ac4614a88f6e1b 313 SUPERFAMILY SSF51735 99 281 1.11E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS05980 ac9fc48b72037297b2ac4614a88f6e1b 313 Gene3D G3DSA:3.40.50.720 9 114 2.7E-23 T 28-03-2018 CJD35_RS05980 ac9fc48b72037297b2ac4614a88f6e1b 313 Gene3D G3DSA:3.40.50.720 115 283 1.5E-48 T 28-03-2018 CJD35_RS10705 980b323176429743f571f1815470bc82 68 PRINTS PR01650 Bacterial translocase SecE signature 47 63 2.0E-5 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CJD35_RS10705 980b323176429743f571f1815470bc82 68 PRINTS PR01650 Bacterial translocase SecE signature 3 23 2.0E-5 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CJD35_RS10705 980b323176429743f571f1815470bc82 68 PRINTS PR01650 Bacterial translocase SecE signature 27 47 2.0E-5 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CJD35_RS10705 980b323176429743f571f1815470bc82 68 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 9 37 - T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CJD35_RS10705 980b323176429743f571f1815470bc82 68 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 8 60 6.2E-16 T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CJD35_RS10705 980b323176429743f571f1815470bc82 68 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 8 61 6.6E-17 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CJD35_RS10705 980b323176429743f571f1815470bc82 68 Gene3D G3DSA:1.20.5.1030 7 57 7.2E-16 T 28-03-2018 CJD35_RS10705 980b323176429743f571f1815470bc82 68 Hamap MF_00422 Protein translocase subunit SecE [secE]. 4 59 11.715 T 28-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CJD35_RS02730 3893c4ec05d2cdc352f264407f798044 144 Pfam PF12200 Domain of unknown function (DUF3597) 3 139 4.4E-42 T 28-03-2018 IPR022016 Domain of unknown function DUF3597 CJD35_RS02730 3893c4ec05d2cdc352f264407f798044 144 SUPERFAMILY SSF158634 1 144 4.05E-41 T 28-03-2018 CJD35_RS03335 c231797455118ac871753f4b989c4466 218 Pfam PF00005 ABC transporter 20 167 1.2E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS03335 c231797455118ac871753f4b989c4466 218 SMART SM00382 29 215 1.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS03335 c231797455118ac871753f4b989c4466 218 SUPERFAMILY SSF52540 4 218 1.36E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03335 c231797455118ac871753f4b989c4466 218 Gene3D G3DSA:3.40.50.300 1 218 1.3E-40 T 28-03-2018 CJD35_RS07230 01c0644f8b9690308328b408afff0252 374 Pfam PF00144 Beta-lactamase 69 206 1.3E-23 T 28-03-2018 IPR001466 Beta-lactamase-related CJD35_RS07230 01c0644f8b9690308328b408afff0252 374 Gene3D G3DSA:3.40.710.10 47 370 6.1E-45 T 28-03-2018 CJD35_RS07230 01c0644f8b9690308328b408afff0252 374 SUPERFAMILY SSF56601 30 353 5.42E-62 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS22140 c3d1c91499fdb988d196acc2ec25bbe7 215 Gene3D G3DSA:1.20.5.730 2 72 8.3E-5 T 28-03-2018 CJD35_RS22140 c3d1c91499fdb988d196acc2ec25bbe7 215 Gene3D G3DSA:1.20.5.340 82 149 0.062 T 28-03-2018 CJD35_RS02575 4e570c43401d00e8fa46ac922830b67e 289 Pfam PF11776 Nickel/cobalt transporter regulator 239 282 1.5E-10 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CJD35_RS02575 4e570c43401d00e8fa46ac922830b67e 289 Gene3D G3DSA:3.10.450.160 183 289 9.1E-17 T 28-03-2018 CJD35_RS04990 33617df29d45810ee05be32361cf3f5d 706 Gene3D G3DSA:2.130.10.10 36 145 0.18 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS04990 33617df29d45810ee05be32361cf3f5d 706 SUPERFAMILY SSF82171 62 224 4.05E-17 T 28-03-2018 CJD35_RS04990 33617df29d45810ee05be32361cf3f5d 706 SUPERFAMILY SSF82171 320 405 4.05E-17 T 28-03-2018 CJD35_RS04990 33617df29d45810ee05be32361cf3f5d 706 SUPERFAMILY SSF53474 422 672 1.28E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS04990 33617df29d45810ee05be32361cf3f5d 706 Pfam PF07676 WD40-like Beta Propeller Repeat 138 158 0.0053 T 28-03-2018 IPR011659 WD40-like Beta Propeller CJD35_RS04990 33617df29d45810ee05be32361cf3f5d 706 Gene3D G3DSA:2.130.10.150 146 419 3.3E-16 T 28-03-2018 CJD35_RS04990 33617df29d45810ee05be32361cf3f5d 706 Gene3D G3DSA:3.40.50.1820 420 684 7.2E-20 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS04990 33617df29d45810ee05be32361cf3f5d 706 Pfam PF00326 Prolyl oligopeptidase family 511 673 9.9E-16 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CJD35_RS10275 bbb53d8e7a78b4d66572705b96e2a3cb 392 Pfam PF03235 Protein of unknown function DUF262 47 197 4.2E-18 T 28-03-2018 IPR004919 Domain of unknown function DUF262 CJD35_RS04325 f4737f5639d5c5d2a84a50fccb2fee15 95 Gene3D G3DSA:3.30.300.90 5 95 2.3E-25 T 28-03-2018 CJD35_RS04325 f4737f5639d5c5d2a84a50fccb2fee15 95 PIRSF PIRSF003113 1 95 3.7E-29 T 28-03-2018 IPR002634 BolA protein CJD35_RS04325 f4737f5639d5c5d2a84a50fccb2fee15 95 SUPERFAMILY SSF82657 6 94 5.23E-26 T 28-03-2018 IPR002634 BolA protein CJD35_RS04325 f4737f5639d5c5d2a84a50fccb2fee15 95 Pfam PF01722 BolA-like protein 17 94 2.0E-29 T 28-03-2018 IPR002634 BolA protein CJD35_RS11270 26de9edfd55616f56390914a03c4532b 296 Gene3D G3DSA:3.40.190.10 88 173 3.7E-13 T 28-03-2018 CJD35_RS11270 26de9edfd55616f56390914a03c4532b 296 SUPERFAMILY SSF46785 5 82 7.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS11270 26de9edfd55616f56390914a03c4532b 296 Gene3D G3DSA:1.10.10.10 2 83 4.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS11270 26de9edfd55616f56390914a03c4532b 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 5.6E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS11270 26de9edfd55616f56390914a03c4532b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS11270 26de9edfd55616f56390914a03c4532b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS11270 26de9edfd55616f56390914a03c4532b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.0E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS11270 26de9edfd55616f56390914a03c4532b 296 Gene3D G3DSA:3.40.190.10 174 259 6.2E-15 T 28-03-2018 CJD35_RS11270 26de9edfd55616f56390914a03c4532b 296 Pfam PF03466 LysR substrate binding domain 91 267 3.3E-20 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS11270 26de9edfd55616f56390914a03c4532b 296 SUPERFAMILY SSF53850 91 269 2.58E-21 T 28-03-2018 CJD35_RS13160 a859571ce8802150832cb8a14ffd20ce 343 Gene3D G3DSA:2.40.40.10 57 171 8.3E-21 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJD35_RS13160 a859571ce8802150832cb8a14ffd20ce 343 Pfam PF03330 Lytic transglycolase 75 163 2.7E-22 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJD35_RS13160 a859571ce8802150832cb8a14ffd20ce 343 Pfam PF05036 Sporulation related domain 273 328 5.4E-12 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS13160 a859571ce8802150832cb8a14ffd20ce 343 SUPERFAMILY SSF50685 72 167 1.05E-9 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJD35_RS13160 a859571ce8802150832cb8a14ffd20ce 343 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 77 167 7.3E-35 T 28-03-2018 IPR012997 Rare lipoprotein A CJD35_RS13160 a859571ce8802150832cb8a14ffd20ce 343 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 12 167 22.862 T 28-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CJD35_RS13160 a859571ce8802150832cb8a14ffd20ce 343 SUPERFAMILY SSF110997 275 338 5.36E-11 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS13160 a859571ce8802150832cb8a14ffd20ce 343 Gene3D G3DSA:3.30.70.1070 275 341 4.0E-12 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS18520 f0a570adf0654671fac69261a7ff52d8 133 Pfam PF06170 Protein of unknown function (DUF983) 26 110 1.6E-27 T 28-03-2018 IPR009325 Protein of unknown function DUF983 CJD35_RS20750 f0a570adf0654671fac69261a7ff52d8 133 Pfam PF06170 Protein of unknown function (DUF983) 26 110 1.6E-27 T 28-03-2018 IPR009325 Protein of unknown function DUF983 CJD35_RS07770 841a121b77259f1c960a7bdfc5d4847d 117 SUPERFAMILY SSF52980 8 115 1.16E-22 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CJD35_RS07770 841a121b77259f1c960a7bdfc5d4847d 117 Pfam PF02021 Uncharacterised protein family UPF0102 13 100 3.4E-19 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 CJD35_RS07770 841a121b77259f1c960a7bdfc5d4847d 117 Gene3D G3DSA:3.40.1350.10 12 116 1.5E-23 T 28-03-2018 CJD35_RS07770 841a121b77259f1c960a7bdfc5d4847d 117 Hamap MF_00048 UPF0102 protein YraN [yraN]. 6 114 17.457 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 CJD35_RS14590 ebdd024551d5376c69acc5489dce69f6 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 82.488 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CJD35_RS14590 ebdd024551d5376c69acc5489dce69f6 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 142 3.6E-54 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CJD35_RS14590 ebdd024551d5376c69acc5489dce69f6 152 Pfam PF03477 ATP cone domain 51 136 2.4E-15 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CJD35_RS19130 bc30514c1e9d23d0ea209cd858fc1a08 242 SUPERFAMILY SSF46609 52 127 9.44E-12 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS19130 bc30514c1e9d23d0ea209cd858fc1a08 242 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 135 233 2.1E-21 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS19130 bc30514c1e9d23d0ea209cd858fc1a08 242 SUPERFAMILY SSF54719 131 237 1.31E-27 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS20310 bc30514c1e9d23d0ea209cd858fc1a08 242 SUPERFAMILY SSF46609 52 127 9.44E-12 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS20310 bc30514c1e9d23d0ea209cd858fc1a08 242 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 135 233 2.1E-21 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS20310 bc30514c1e9d23d0ea209cd858fc1a08 242 SUPERFAMILY SSF54719 131 237 1.31E-27 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS13350 bfdd46809822431ddec7184c75a0ffe9 297 Gene3D G3DSA:3.40.50.410 52 220 1.8E-22 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS13350 bfdd46809822431ddec7184c75a0ffe9 297 SUPERFAMILY SSF53300 77 230 4.2E-14 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS13350 bfdd46809822431ddec7184c75a0ffe9 297 Pfam PF01882 Protein of unknown function DUF58 40 127 4.2E-19 T 28-03-2018 IPR002881 Domain of unknown function DUF58 CJD35_RS18790 4c0e6b7feee916dc663e0668411336cc 449 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 200 424 1.6E-29 T 28-03-2018 IPR007184 Mannoside phosphorylase CJD35_RS18790 4c0e6b7feee916dc663e0668411336cc 449 SUPERFAMILY SSF75005 208 418 7.85E-54 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CJD35_RS18790 4c0e6b7feee916dc663e0668411336cc 449 Gene3D G3DSA:2.115.10.20 65 446 5.4E-73 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CJD35_RS13315 29f33c3ddb1c35eca913af4421573071 311 Hamap MF_00008 Thymidylate synthase [thyA]. 9 311 35.816 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CJD35_RS13315 29f33c3ddb1c35eca913af4421573071 311 ProSitePatterns PS00091 Thymidylate synthase active site. 173 201 - T 28-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CJD35_RS13315 29f33c3ddb1c35eca913af4421573071 311 PRINTS PR00108 Thymidylate synthase family signature 206 232 1.8E-34 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CJD35_RS13315 29f33c3ddb1c35eca913af4421573071 311 PRINTS PR00108 Thymidylate synthase family signature 51 72 1.8E-34 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CJD35_RS13315 29f33c3ddb1c35eca913af4421573071 311 PRINTS PR00108 Thymidylate synthase family signature 162 181 1.8E-34 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CJD35_RS13315 29f33c3ddb1c35eca913af4421573071 311 PRINTS PR00108 Thymidylate synthase family signature 244 261 1.8E-34 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CJD35_RS13315 29f33c3ddb1c35eca913af4421573071 311 PRINTS PR00108 Thymidylate synthase family signature 188 203 1.8E-34 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CJD35_RS13315 29f33c3ddb1c35eca913af4421573071 311 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 10 311 4.2E-94 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CJD35_RS13315 29f33c3ddb1c35eca913af4421573071 311 SUPERFAMILY SSF55831 5 311 2.22E-105 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CJD35_RS13315 29f33c3ddb1c35eca913af4421573071 311 Pfam PF00303 Thymidylate synthase 10 311 4.8E-96 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CJD35_RS13315 29f33c3ddb1c35eca913af4421573071 311 Gene3D G3DSA:3.30.572.10 2 311 1.7E-104 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CJD35_RS21615 3e832e23c862fca91d040cd9de8efcd6 428 Pfam PF02040 Arsenical pump membrane protein 3 422 5.1E-159 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJD35_RS21615 3e832e23c862fca91d040cd9de8efcd6 428 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 425 2.0E-209 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJD35_RS21615 3e832e23c862fca91d040cd9de8efcd6 428 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 2.3E-112 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJD35_RS21615 3e832e23c862fca91d040cd9de8efcd6 428 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 2.3E-112 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJD35_RS21615 3e832e23c862fca91d040cd9de8efcd6 428 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 2.3E-112 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJD35_RS21615 3e832e23c862fca91d040cd9de8efcd6 428 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 2.3E-112 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJD35_RS21615 3e832e23c862fca91d040cd9de8efcd6 428 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 2.3E-112 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJD35_RS21615 3e832e23c862fca91d040cd9de8efcd6 428 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 2.3E-112 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJD35_RS21615 3e832e23c862fca91d040cd9de8efcd6 428 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 2.3E-112 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJD35_RS21615 3e832e23c862fca91d040cd9de8efcd6 428 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 2.3E-112 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CJD35_RS11815 0d0a9d5f4d3f651eaeed0eb72543390f 363 Pfam PF05433 Glycine zipper 2TM domain 176 216 2.5E-9 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CJD35_RS11815 0d0a9d5f4d3f651eaeed0eb72543390f 363 Pfam PF11776 Nickel/cobalt transporter regulator 93 141 1.9E-9 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CJD35_RS00335 dc35d2ae6f264b54fc688adcd700b869 135 TIGRFAM TIGR02126 phgtail_TP901_1: phage major tail protein, TP901-1 family 10 130 2.7E-10 T 28-03-2018 IPR011855 Phage major tail protein TP901-1 CJD35_RS00335 dc35d2ae6f264b54fc688adcd700b869 135 Pfam PF06199 Phage tail tube protein 5 133 6.8E-37 T 28-03-2018 IPR011855 Phage major tail protein TP901-1 CJD35_RS00335 dc35d2ae6f264b54fc688adcd700b869 135 PRINTS PR01996 Phage major tail protein 1 family signature 110 134 2.2E-31 T 28-03-2018 IPR022344 Gene transfer agent, major tail protein CJD35_RS00335 dc35d2ae6f264b54fc688adcd700b869 135 PRINTS PR01996 Phage major tail protein 1 family signature 51 80 2.2E-31 T 28-03-2018 IPR022344 Gene transfer agent, major tail protein CJD35_RS00335 dc35d2ae6f264b54fc688adcd700b869 135 PRINTS PR01996 Phage major tail protein 1 family signature 22 51 2.2E-31 T 28-03-2018 IPR022344 Gene transfer agent, major tail protein CJD35_RS00335 dc35d2ae6f264b54fc688adcd700b869 135 PRINTS PR01996 Phage major tail protein 1 family signature 1 13 2.2E-31 T 28-03-2018 IPR022344 Gene transfer agent, major tail protein CJD35_RS10075 e101dd415fc23fda85b83f2a82ede1a1 223 Pfam PF04586 Caudovirus prohead serine protease 31 157 2.2E-11 T 28-03-2018 IPR006433 Prohead protease CJD35_RS10075 e101dd415fc23fda85b83f2a82ede1a1 223 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 32 161 1.7E-17 T 28-03-2018 IPR006433 Prohead protease CJD35_RS10075 e101dd415fc23fda85b83f2a82ede1a1 223 Gene3D G3DSA:3.20.16.10 17 188 5.8E-18 T 28-03-2018 IPR035443 Herpesvirus/Caudovirus protease domain CJD35_RS21695 8f6c256b8cd4171e5d99f7e620777386 617 Gene3D G3DSA:3.90.1530.10 1 97 8.2E-19 T 28-03-2018 CJD35_RS21695 8f6c256b8cd4171e5d99f7e620777386 617 Gene3D G3DSA:1.10.10.730 98 144 1.9E-11 T 28-03-2018 CJD35_RS21695 8f6c256b8cd4171e5d99f7e620777386 617 SUPERFAMILY SSF110849 4 99 6.8E-14 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS21695 8f6c256b8cd4171e5d99f7e620777386 617 Pfam PF02195 ParB-like nuclease domain 5 96 6.6E-14 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS21695 8f6c256b8cd4171e5d99f7e620777386 617 SMART SM00470 4 97 7.5E-13 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS21695 8f6c256b8cd4171e5d99f7e620777386 617 SUPERFAMILY SSF109709 89 187 1.7E-23 T 28-03-2018 CJD35_RS11110 2b96846108addead7a2232e00bed886e 401 Pfam PF02687 FtsX-like permease family 307 394 7.0E-11 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CJD35_RS11110 2b96846108addead7a2232e00bed886e 401 Pfam PF12704 MacB-like periplasmic core domain 20 240 1.0E-41 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CJD35_RS12190 c206e33147c1403a89c43d5f3b4cb991 402 PIRSF PIRSF001434 3 401 4.2E-121 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CJD35_RS12190 c206e33147c1403a89c43d5f3b4cb991 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 19 397 6.2E-126 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CJD35_RS12190 c206e33147c1403a89c43d5f3b4cb991 402 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 19 398 51.096 T 28-03-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 CJD35_RS12190 c206e33147c1403a89c43d5f3b4cb991 402 SUPERFAMILY SSF53383 44 398 5.05E-110 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS12190 c206e33147c1403a89c43d5f3b4cb991 402 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 18 397 1.4E-154 T 28-03-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 CJD35_RS12190 c206e33147c1403a89c43d5f3b4cb991 402 Gene3D G3DSA:3.40.640.10 15 267 1.5E-53 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS12190 c206e33147c1403a89c43d5f3b4cb991 402 Gene3D G3DSA:3.90.1150.10 269 402 1.9E-42 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS01995 7f4a09e9c2055e802502d1a485dad048 240 SUPERFAMILY SSF53474 12 238 2.6E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS01995 7f4a09e9c2055e802502d1a485dad048 240 Pfam PF01738 Dienelactone hydrolase family 24 237 2.5E-33 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CJD35_RS01995 7f4a09e9c2055e802502d1a485dad048 240 Gene3D G3DSA:3.40.50.1820 15 240 4.2E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS15980 5d166588801e629b310d174e880cc3e1 165 Gene3D G3DSA:1.10.10.60 120 165 2.6E-11 T 28-03-2018 CJD35_RS15980 5d166588801e629b310d174e880cc3e1 165 Gene3D G3DSA:1.10.10.60 12 119 1.3E-8 T 28-03-2018 CJD35_RS15980 5d166588801e629b310d174e880cc3e1 165 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 128 143 4.7E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS15980 5d166588801e629b310d174e880cc3e1 165 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 143 159 4.7E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CJD35_RS15980 5d166588801e629b310d174e880cc3e1 165 Pfam PF12833 Helix-turn-helix domain 82 161 2.3E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS15980 5d166588801e629b310d174e880cc3e1 165 SUPERFAMILY SSF46689 114 162 3.0E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS15980 5d166588801e629b310d174e880cc3e1 165 SMART SM00342 76 159 3.4E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS11965 d998bf38f6cd240869e02599c215c4f4 146 PIRSF PIRSF030820 13 145 1.6E-38 T 28-03-2018 IPR008318 Uncharacterised conserved protein UCP030820 CJD35_RS11965 d998bf38f6cd240869e02599c215c4f4 146 PIRSF PIRSF030820 2 16 880.0 T 28-03-2018 IPR008318 Uncharacterised conserved protein UCP030820 CJD35_RS11965 d998bf38f6cd240869e02599c215c4f4 146 Pfam PF06073 Bacterial protein of unknown function (DUF934) 31 136 6.6E-37 T 28-03-2018 IPR008318 Uncharacterised conserved protein UCP030820 CJD35_RS19925 44e3ff463907d20153b1bb71d682da80 768 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 225 609 1.7E-152 T 28-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain CJD35_RS19925 44e3ff463907d20153b1bb71d682da80 768 Gene3D G3DSA:3.40.50.300 156 623 2.3E-37 T 28-03-2018 CJD35_RS19925 44e3ff463907d20153b1bb71d682da80 768 SUPERFAMILY SSF52540 214 619 3.31E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS15895 86fdf371fd2db5625af2b8fd5eeea19d 347 Pfam PF01548 Transposase 7 141 1.4E-11 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CJD35_RS15895 86fdf371fd2db5625af2b8fd5eeea19d 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 288 1.1E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CJD35_RS15125 86fdf371fd2db5625af2b8fd5eeea19d 347 Pfam PF01548 Transposase 7 141 1.4E-11 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CJD35_RS15125 86fdf371fd2db5625af2b8fd5eeea19d 347 Pfam PF02371 Transposase IS116/IS110/IS902 family 211 288 1.1E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CJD35_RS05780 73ff0073b5d722dbf1896ee36d6724f7 149 Pfam PF12100 Domain of unknown function (DUF3576) 44 143 6.6E-44 T 28-03-2018 IPR021959 Protein of unknown function DUF3576 CJD35_RS04355 fdf5d86a2e889ffa1d8c934b51bc7413 106 Gene3D G3DSA:1.20.120.580 58 106 1.7E-7 T 28-03-2018 IPR008201 Protein of unknown function DUF86 CJD35_RS04355 fdf5d86a2e889ffa1d8c934b51bc7413 106 Gene3D G3DSA:1.20.120.580 3 57 0.0078 T 28-03-2018 IPR008201 Protein of unknown function DUF86 CJD35_RS04355 fdf5d86a2e889ffa1d8c934b51bc7413 106 Pfam PF01934 Protein of unknown function DUF86 6 98 7.5E-16 T 28-03-2018 IPR008201 Protein of unknown function DUF86 CJD35_RS18885 babd6d7be2cc1072240d69187ff9aa15 420 Pfam PF13657 HipA N-terminal domain 19 119 1.3E-6 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 CJD35_RS18885 babd6d7be2cc1072240d69187ff9aa15 420 Pfam PF07804 HipA-like C-terminal domain 172 388 1.4E-49 T 28-03-2018 IPR012893 HipA-like, C-terminal CJD35_RS09010 63a935ce6c51c902ae9d3455549ecd55 249 Pfam PF13614 AAA domain 9 167 5.4E-32 T 28-03-2018 IPR025669 AAA domain CJD35_RS09010 63a935ce6c51c902ae9d3455549ecd55 249 SUPERFAMILY SSF52540 9 246 2.34E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS09010 63a935ce6c51c902ae9d3455549ecd55 249 Gene3D G3DSA:3.40.50.300 8 246 1.0E-41 T 28-03-2018 CJD35_RS17140 193167ded6ae7afd833c73cad2bad319 885 Pfam PF07715 TonB-dependent Receptor Plug Domain 83 202 3.2E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17140 193167ded6ae7afd833c73cad2bad319 885 Pfam PF00593 TonB dependent receptor 392 868 7.1E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17140 193167ded6ae7afd833c73cad2bad319 885 Gene3D G3DSA:2.40.170.20 201 885 7.6E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17140 193167ded6ae7afd833c73cad2bad319 885 Gene3D G3DSA:2.170.130.10 79 200 2.9E-23 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17140 193167ded6ae7afd833c73cad2bad319 885 SUPERFAMILY SSF56935 69 268 1.62E-92 T 28-03-2018 CJD35_RS17140 193167ded6ae7afd833c73cad2bad319 885 SUPERFAMILY SSF56935 314 719 1.62E-92 T 28-03-2018 CJD35_RS17140 193167ded6ae7afd833c73cad2bad319 885 SUPERFAMILY SSF56935 746 883 1.62E-92 T 28-03-2018 CJD35_RS08825 7e80e6b46df2b9ba655613e89ce840dd 255 Gene3D G3DSA:3.40.50.720 1 250 8.2E-65 T 28-03-2018 CJD35_RS08825 7e80e6b46df2b9ba655613e89ce840dd 255 Pfam PF00899 ThiF family 11 247 1.1E-56 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CJD35_RS08825 7e80e6b46df2b9ba655613e89ce840dd 255 SUPERFAMILY SSF69572 2 248 4.32E-76 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CJD35_RS17330 7873188451cfb9f2a68f22c2de87bd40 127 SUPERFAMILY SSF46785 5 96 8.99E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17330 7873188451cfb9f2a68f22c2de87bd40 127 SMART SM00418 16 94 4.1E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS17330 7873188451cfb9f2a68f22c2de87bd40 127 Pfam PF01022 Bacterial regulatory protein, arsR family 25 68 3.3E-12 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS17330 7873188451cfb9f2a68f22c2de87bd40 127 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 50 65 6.5E-8 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS17330 7873188451cfb9f2a68f22c2de87bd40 127 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 80 6.5E-8 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS17330 7873188451cfb9f2a68f22c2de87bd40 127 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 6.5E-8 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CJD35_RS17330 7873188451cfb9f2a68f22c2de87bd40 127 Gene3D G3DSA:1.10.10.10 2 96 8.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02130 f197b00c309f68ad07d38af48363c22b 228 SUPERFAMILY SSF52833 10 80 4.17E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS02130 f197b00c309f68ad07d38af48363c22b 228 Pfam PF13410 Glutathione S-transferase, C-terminal domain 132 197 5.8E-7 T 28-03-2018 CJD35_RS02130 f197b00c309f68ad07d38af48363c22b 228 Pfam PF13417 Glutathione S-transferase, N-terminal domain 11 80 7.0E-9 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS02130 f197b00c309f68ad07d38af48363c22b 228 Gene3D G3DSA:3.40.30.10 1 81 1.2E-16 T 28-03-2018 CJD35_RS02130 f197b00c309f68ad07d38af48363c22b 228 Gene3D G3DSA:1.20.1050.10 82 218 1.4E-18 T 28-03-2018 CJD35_RS02130 f197b00c309f68ad07d38af48363c22b 228 SUPERFAMILY SSF47616 83 198 9.38E-16 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS18005 98d147964559c4977acb8da03465dd6d 265 Pfam PF09836 Putative DNA-binding domain 6 91 4.1E-16 T 28-03-2018 IPR018640 Putative DNA-binding domain, bacteria CJD35_RS12475 a6099ba6190c0c570b233748e6776eb5 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.6E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS12475 a6099ba6190c0c570b233748e6776eb5 202 Gene3D G3DSA:1.10.10.60 5 66 1.3E-17 T 28-03-2018 CJD35_RS12475 a6099ba6190c0c570b233748e6776eb5 202 SUPERFAMILY SSF46689 8 84 5.34E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS12475 a6099ba6190c0c570b233748e6776eb5 202 Gene3D G3DSA:1.10.357.10 67 200 6.5E-11 T 28-03-2018 CJD35_RS12475 a6099ba6190c0c570b233748e6776eb5 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 8.8E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS12475 a6099ba6190c0c570b233748e6776eb5 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 8.8E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS13025 660128b645d3e2ed9f6d9e9619118f8e 188 Pfam PF00227 Proteasome subunit 13 183 2.3E-23 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CJD35_RS13025 660128b645d3e2ed9f6d9e9619118f8e 188 PIRSF PIRSF039093 8 187 3.3E-83 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CJD35_RS13025 660128b645d3e2ed9f6d9e9619118f8e 188 Gene3D G3DSA:3.60.20.10 15 186 1.0E-33 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS13025 660128b645d3e2ed9f6d9e9619118f8e 188 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 14 184 39.713 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CJD35_RS13025 660128b645d3e2ed9f6d9e9619118f8e 188 SUPERFAMILY SSF56235 11 184 6.72E-60 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS13025 660128b645d3e2ed9f6d9e9619118f8e 188 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 15 184 2.0E-82 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CJD35_RS12290 305978fa8b77a72fb5bcb2ea494b6912 147 Gene3D G3DSA:1.10.490.10 1 147 6.4E-32 T 28-03-2018 CJD35_RS12290 305978fa8b77a72fb5bcb2ea494b6912 147 SUPERFAMILY SSF46458 4 141 8.15E-33 T 28-03-2018 IPR009050 Globin-like CJD35_RS12290 305978fa8b77a72fb5bcb2ea494b6912 147 Pfam PF00042 Globin 10 105 6.3E-8 T 28-03-2018 IPR000971 Globin GO:0020037 CJD35_RS00400 ed5de27cb038e8a1ed61b3685803f008 440 Gene3D G3DSA:2.60.40.10 348 431 2.7E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS00400 ed5de27cb038e8a1ed61b3685803f008 440 Gene3D G3DSA:3.40.630.10 24 347 8.8E-37 T 28-03-2018 CJD35_RS00400 ed5de27cb038e8a1ed61b3685803f008 440 Pfam PF04389 Peptidase family M28 113 300 1.7E-19 T 28-03-2018 IPR007484 Peptidase M28 CJD35_RS00400 ed5de27cb038e8a1ed61b3685803f008 440 SUPERFAMILY SSF53187 28 352 5.39E-43 T 28-03-2018 CJD35_RS21775 c32124f99a48c53fb19cccb56a4d6083 249 Pfam PF03332 Eukaryotic phosphomannomutase 25 219 3.7E-10 T 28-03-2018 IPR005002 Phosphomannomutase GO:0004615|GO:0005737|GO:0009298 KEGG: 00051+5.4.2.8|KEGG: 00520+5.4.2.8|MetaCyc: PWY-5659|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CJD35_RS21775 c32124f99a48c53fb19cccb56a4d6083 249 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 229 1.7E-22 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CJD35_RS21775 c32124f99a48c53fb19cccb56a4d6083 249 Gene3D G3DSA:3.40.50.1000 1 244 3.6E-16 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS21775 c32124f99a48c53fb19cccb56a4d6083 249 SUPERFAMILY SSF56784 4 232 6.4E-36 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS05340 b4a96ed5b990d0516933cc10d65b14a0 236 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 127 229 2.1E-24 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS05340 b4a96ed5b990d0516933cc10d65b14a0 236 PIRSF PIRSF000349 19 235 7.1E-41 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS05340 b4a96ed5b990d0516933cc10d65b14a0 236 SUPERFAMILY SSF54719 123 233 6.02E-31 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS05340 b4a96ed5b990d0516933cc10d65b14a0 236 SUPERFAMILY SSF46609 42 120 2.26E-12 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CJD35_RS11820 aede8146610b57b4c4c474a8feaf91da 161 Pfam PF13185 GAF domain 40 158 2.4E-14 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS11820 aede8146610b57b4c4c474a8feaf91da 161 SUPERFAMILY SSF55781 11 160 9.16E-45 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS11820 aede8146610b57b4c4c474a8feaf91da 161 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 99 116 - T 28-03-2018 IPR000614 Free Met sulfoxide reductase conserved site CJD35_RS11820 aede8146610b57b4c4c474a8feaf91da 161 SMART SM00065 14 160 0.0014 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS11820 aede8146610b57b4c4c474a8feaf91da 161 Gene3D G3DSA:3.30.450.40 7 160 1.9E-27 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS11355 2fbc3a95809a327942590fcf54b420b9 284 Pfam PF13280 WYL domain 56 138 1.3E-7 T 28-03-2018 IPR026881 WYL domain CJD35_RS11355 2fbc3a95809a327942590fcf54b420b9 284 Gene3D G3DSA:1.10.3680.10 139 268 3.0E-6 T 28-03-2018 IPR029024 TerB-like CJD35_RS11355 2fbc3a95809a327942590fcf54b420b9 284 SUPERFAMILY SSF158682 155 263 1.96E-5 T 28-03-2018 CJD35_RS16195 27d27d2377982b583c23a32870a8c3dd 258 Pfam PF08878 Domain of unknown function (DUF1837) 49 191 6.2E-9 T 28-03-2018 IPR014976 Protein of unknown function DUF1837 CJD35_RS16195 27d27d2377982b583c23a32870a8c3dd 258 Gene3D G3DSA:3.40.47.10 20 249 1.7E-4 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CJD35_RS04110 0c95dc4f08e8ef3e101fc9b148641cbd 241 SUPERFAMILY SSF54001 16 137 3.04E-19 T 28-03-2018 CJD35_RS04110 0c95dc4f08e8ef3e101fc9b148641cbd 241 Pfam PF05257 CHAP domain 19 89 3.2E-8 T 28-03-2018 IPR007921 CHAP domain CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 2.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.5E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.5E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.5E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 7.5E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 7.5E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.5E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 Gene3D G3DSA:3.40.50.720 6 258 7.2E-65 T 28-03-2018 CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 250 3.0E-57 T 28-03-2018 CJD35_RS00570 86276b913707cc2afbba67d7b3eb54e6 259 SUPERFAMILY SSF51735 6 252 3.08E-69 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS20475 908c66759160e368897a932deb67d3a2 508 SUPERFAMILY SSF53098 326 445 8.72E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS20475 908c66759160e368897a932deb67d3a2 508 Pfam PF07715 TonB-dependent Receptor Plug Domain 54 163 8.9E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS20475 908c66759160e368897a932deb67d3a2 508 Gene3D G3DSA:3.30.420.10 316 462 1.2E-11 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS20475 908c66759160e368897a932deb67d3a2 508 Gene3D G3DSA:2.170.130.10 31 175 2.1E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS20475 908c66759160e368897a932deb67d3a2 508 SUPERFAMILY SSF56935 36 267 2.47E-42 T 28-03-2018 CJD35_RS20475 908c66759160e368897a932deb67d3a2 508 Pfam PF13610 DDE domain 327 465 1.8E-49 T 28-03-2018 IPR032874 DDE domain CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 Gene3D G3DSA:1.10.357.20 305 477 3.1E-28 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 SUPERFAMILY SSF54631 165 297 1.64E-26 T 28-03-2018 CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 Gene3D G3DSA:3.10.580.10 154 292 4.5E-20 T 28-03-2018 CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 SMART SM00924 62 165 2.2E-31 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 Pfam PF01769 Divalent cation transporter 350 469 5.6E-24 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 TIGRFAM TIGR00400 mgtE: magnesium transporter 47 476 9.3E-87 T 28-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 SUPERFAMILY SSF158791 37 162 8.11E-29 T 28-03-2018 CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 Pfam PF03448 MgtE intracellular N domain 62 163 7.5E-24 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 SUPERFAMILY SSF161093 304 476 2.35E-42 T 28-03-2018 CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 SMART SM00116 236 284 4.5E-4 T 28-03-2018 IPR000644 CBS domain CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 SMART SM00116 172 225 4.3 T 28-03-2018 IPR000644 CBS domain CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 Pfam PF00571 CBS domain 231 283 2.1E-6 T 28-03-2018 IPR000644 CBS domain CJD35_RS03385 1c8998d5fff25aea4bd8dc1bc38479a6 477 Gene3D G3DSA:1.25.60.10 30 153 2.0E-20 T 28-03-2018 CJD35_RS08330 f8d86598ba31bed3668cba5c572c4b23 443 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS08330 f8d86598ba31bed3668cba5c572c4b23 443 SUPERFAMILY SSF51338 366 430 4.32E-34 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS08330 f8d86598ba31bed3668cba5c572c4b23 443 SUPERFAMILY SSF51338 5 55 4.32E-34 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS08330 f8d86598ba31bed3668cba5c572c4b23 443 Gene3D G3DSA:2.30.40.10 4 70 2.0E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS08330 f8d86598ba31bed3668cba5c572c4b23 443 Gene3D G3DSA:3.20.20.140 71 387 9.2E-98 T 28-03-2018 CJD35_RS08330 f8d86598ba31bed3668cba5c572c4b23 443 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 21 423 1.5E-97 T 28-03-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CJD35_RS08330 f8d86598ba31bed3668cba5c572c4b23 443 SUPERFAMILY SSF51556 56 367 3.41E-94 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS08330 f8d86598ba31bed3668cba5c572c4b23 443 Pfam PF01979 Amidohydrolase family 53 420 4.8E-23 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS01280 c0f211bf20aa801d78e1a56d87734256 543 Pfam PF06418 CTP synthase N-terminus 3 264 1.4E-119 T 28-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CJD35_RS01280 c0f211bf20aa801d78e1a56d87734256 543 Pfam PF00117 Glutamine amidotransferase class-I 301 535 1.1E-54 T 28-03-2018 IPR017926 Glutamine amidotransferase CJD35_RS01280 c0f211bf20aa801d78e1a56d87734256 543 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 1.9E-225 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CJD35_RS01280 c0f211bf20aa801d78e1a56d87734256 543 Gene3D G3DSA:3.40.50.300 1 285 1.2E-121 T 28-03-2018 CJD35_RS01280 c0f211bf20aa801d78e1a56d87734256 543 SUPERFAMILY SSF52540 1 266 2.6E-118 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01280 c0f211bf20aa801d78e1a56d87734256 543 Gene3D G3DSA:3.40.50.880 286 542 2.9E-65 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS01280 c0f211bf20aa801d78e1a56d87734256 543 SUPERFAMILY SSF52317 289 539 5.38E-80 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS01280 c0f211bf20aa801d78e1a56d87734256 543 Hamap MF_01227 CTP synthase [pyrG]. 2 540 49.661 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CJD35_RS07605 821580bda3abbe0b004df6496c4ed05a 145 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 31 134 3.3E-28 T 28-03-2018 IPR018673 Protein of unknown function DUF2141 CJD35_RS14090 e8ef6f2e27c17a89a2f65a2256b59d8d 314 Pfam PF04960 Glutaminase 23 307 1.7E-109 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CJD35_RS14090 e8ef6f2e27c17a89a2f65a2256b59d8d 314 SUPERFAMILY SSF56601 7 308 3.47E-109 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS14090 e8ef6f2e27c17a89a2f65a2256b59d8d 314 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 307 3.7E-122 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CJD35_RS14090 e8ef6f2e27c17a89a2f65a2256b59d8d 314 Gene3D G3DSA:3.40.710.10 2 309 2.4E-120 T 28-03-2018 CJD35_RS14090 e8ef6f2e27c17a89a2f65a2256b59d8d 314 Hamap MF_00313 Glutaminase [glsA]. 5 307 45.081 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CJD35_RS22280 df2fb5c34e00d18abc5203c1601f3796 545 SUPERFAMILY SSF53448 261 520 9.0E-47 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS22280 df2fb5c34e00d18abc5203c1601f3796 545 Pfam PF00535 Glycosyl transferase family 2 273 401 4.3E-17 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS22280 df2fb5c34e00d18abc5203c1601f3796 545 Gene3D G3DSA:3.90.550.10 240 531 1.5E-41 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS13370 bde655a623bd475ccf3383b9df6dd591 149 SUPERFAMILY SSF53098 4 146 6.22E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS20865 4b85e551a9aa8d4429077e7c14b1afe1 227 PIRSF PIRSF003299 4 227 6.5E-61 T 28-03-2018 IPR026264 Type IV secretion system protein VirB8/PtlE GO:0030255 CJD35_RS20865 4b85e551a9aa8d4429077e7c14b1afe1 227 Pfam PF04335 VirB8 protein 17 222 2.9E-49 T 28-03-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 CJD35_RS20865 4b85e551a9aa8d4429077e7c14b1afe1 227 SUPERFAMILY SSF54427 89 226 6.13E-33 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 89 100 9.9E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 9.9E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 9.9E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 Gene3D G3DSA:3.40.50.720 7 285 8.7E-53 T 28-03-2018 CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 1.7E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 1.7E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.7E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 1.7E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 89 100 1.7E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 Pfam PF00106 short chain dehydrogenase 16 202 8.2E-45 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17680 555ea71b0434aebf91c8cf8df0db0aa3 312 SUPERFAMILY SSF51735 9 254 1.55E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS03345 bf14fab1a238e37ecd82a8fc16a77acf 331 Pfam PF02470 MlaD protein 39 84 3.3E-7 T 28-03-2018 IPR003399 Mce/MlaD CJD35_RS16180 0a6984488c56711e3b08d1ed3b3926fa 74 Gene3D G3DSA:1.10.1220.10 1 50 7.1E-6 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 254 1.3E-53 T 28-03-2018 CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 1.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 1.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 1.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 1.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 SUPERFAMILY SSF51735 5 254 9.7E-75 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 Gene3D G3DSA:3.40.50.720 2 47 1.6E-8 T 28-03-2018 CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 Gene3D G3DSA:3.40.50.720 48 256 8.8E-59 T 28-03-2018 CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 4.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 4.5E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15530 a6a85686863f96afd2ea32b698f5082d 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 149 177 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS11945 d1f8e775581b2e90d050ff7853c74916 160 Pfam PF06793 Uncharacterised protein family (UPF0262) 4 159 9.4E-68 T 28-03-2018 IPR008321 Uncharacterised conserved protein UCP032146 CJD35_RS11945 d1f8e775581b2e90d050ff7853c74916 160 Hamap MF_00678 UPF0262 protein . 3 159 38.539 T 28-03-2018 IPR008321 Uncharacterised conserved protein UCP032146 CJD35_RS11945 d1f8e775581b2e90d050ff7853c74916 160 PIRSF PIRSF032146 1 160 3.1E-59 T 28-03-2018 IPR008321 Uncharacterised conserved protein UCP032146 CJD35_RS09850 bd0bf0aee7e3d903fd8939376c971662 356 Gene3D G3DSA:3.40.190.10 200 348 1.4E-17 T 28-03-2018 CJD35_RS09850 bd0bf0aee7e3d903fd8939376c971662 356 SUPERFAMILY SSF53850 38 345 1.06E-63 T 28-03-2018 CJD35_RS09850 bd0bf0aee7e3d903fd8939376c971662 356 Pfam PF12849 PBP superfamily domain 33 312 8.8E-36 T 28-03-2018 IPR024370 PBP domain CJD35_RS09850 bd0bf0aee7e3d903fd8939376c971662 356 Gene3D G3DSA:3.40.190.10 38 178 7.0E-22 T 28-03-2018 CJD35_RS09290 ff971787daf6ac4e6e51bc4152058a5e 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 3.4E-12 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CJD35_RS09290 ff971787daf6ac4e6e51bc4152058a5e 90 PRINTS PR00107 Phosphocarrier protein signature 15 31 3.4E-12 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CJD35_RS09290 ff971787daf6ac4e6e51bc4152058a5e 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 3.4E-12 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CJD35_RS09290 ff971787daf6ac4e6e51bc4152058a5e 90 SUPERFAMILY SSF55594 6 90 6.54E-24 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CJD35_RS09290 ff971787daf6ac4e6e51bc4152058a5e 90 Pfam PF00381 PTS HPr component phosphorylation site 5 84 2.8E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CJD35_RS09290 ff971787daf6ac4e6e51bc4152058a5e 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 5 83 7.6E-24 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CJD35_RS09290 ff971787daf6ac4e6e51bc4152058a5e 90 Gene3D G3DSA:3.30.1340.10 1 84 2.9E-24 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CJD35_RS09290 ff971787daf6ac4e6e51bc4152058a5e 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CJD35_RS05590 35b73fab268ac6b02dc7dd95392fb201 265 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 8 256 1.4E-18 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS05590 35b73fab268ac6b02dc7dd95392fb201 265 Gene3D G3DSA:3.60.10.10 4 265 1.4E-42 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS05590 35b73fab268ac6b02dc7dd95392fb201 265 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 31 40 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CJD35_RS05590 35b73fab268ac6b02dc7dd95392fb201 265 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 5 261 3.7E-56 T 28-03-2018 CJD35_RS05590 35b73fab268ac6b02dc7dd95392fb201 265 SUPERFAMILY SSF56219 5 264 5.23E-65 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CJD35_RS05590 35b73fab268ac6b02dc7dd95392fb201 265 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 6 263 3.3E-53 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CJD35_RS05580 4652939d48703555de051955d51f145f 166 Pfam PF03734 L,D-transpeptidase catalytic domain 18 163 7.7E-9 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CJD35_RS05580 4652939d48703555de051955d51f145f 166 SUPERFAMILY SSF141523 18 56 4.32E-5 T 28-03-2018 CJD35_RS05580 4652939d48703555de051955d51f145f 166 SUPERFAMILY SSF141523 106 165 4.32E-5 T 28-03-2018 CJD35_RS05580 4652939d48703555de051955d51f145f 166 Gene3D G3DSA:2.40.440.10 11 166 9.4E-7 T 28-03-2018 CJD35_RS20105 874e81c8d80a50b32d1b4edb8801e667 256 SUPERFAMILY SSF69572 20 225 5.23E-16 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CJD35_RS20105 874e81c8d80a50b32d1b4edb8801e667 256 TIGRFAM TIGR03736 PRTRC_ThiF: PRTRC system ThiF family protein 9 248 1.8E-77 T 28-03-2018 IPR022500 ParB-related, ThiF-related cassette, ThiF CJD35_RS20105 874e81c8d80a50b32d1b4edb8801e667 256 Pfam PF00899 ThiF family 19 224 5.6E-13 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CJD35_RS20105 874e81c8d80a50b32d1b4edb8801e667 256 Gene3D G3DSA:3.40.50.720 18 253 1.3E-22 T 28-03-2018 CJD35_RS15735 e34155f07c7b505170618a6edae34ffa 247 SUPERFAMILY SSF48008 120 223 5.49E-12 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CJD35_RS15735 e34155f07c7b505170618a6edae34ffa 247 SMART SM00345 35 96 2.9E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS15735 e34155f07c7b505170618a6edae34ffa 247 Gene3D G3DSA:1.10.10.10 3 95 3.2E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS15735 e34155f07c7b505170618a6edae34ffa 247 Pfam PF07729 FCD domain 105 222 3.5E-12 T 28-03-2018 IPR011711 GntR, C-terminal CJD35_RS15735 e34155f07c7b505170618a6edae34ffa 247 Gene3D G3DSA:1.20.120.530 97 241 2.6E-12 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CJD35_RS15735 e34155f07c7b505170618a6edae34ffa 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 33 87 4.1E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS15735 e34155f07c7b505170618a6edae34ffa 247 SUPERFAMILY SSF46785 27 97 1.65E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS14410 8c835d0a7139c44c3bdd2040eeabcb58 349 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 224 237 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14410 8c835d0a7139c44c3bdd2040eeabcb58 349 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 16 343 23.743 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14410 8c835d0a7139c44c3bdd2040eeabcb58 349 Pfam PF00146 NADH dehydrogenase 24 336 1.6E-118 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS03795 3a8d69ffe32afabd293d0dc21ffdf1b7 393 Pfam PF12698 ABC-2 family transporter protein 154 364 4.3E-18 T 28-03-2018 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 SMART SM00382 162 356 0.0018 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 Gene3D G3DSA:1.10.10.60 397 434 9.5E-13 T 28-03-2018 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 Pfam PF00158 Sigma-54 interaction domain 142 307 1.6E-43 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 SUPERFAMILY SSF52172 4 186 1.57E-41 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 Pfam PF02954 Bacterial regulatory protein, Fis family 392 432 6.9E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 SUPERFAMILY SSF46689 354 435 2.47E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 Gene3D G3DSA:3.40.50.2300 2 137 1.5E-32 T 28-03-2018 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 SMART SM00448 3 114 8.8E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 SUPERFAMILY SSF52540 142 370 3.74E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 415 435 4.2E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 398 415 4.2E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 Gene3D G3DSA:1.10.8.60 314 396 4.6E-20 T 28-03-2018 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 Pfam PF00072 Response regulator receiver domain 5 115 4.8E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS17150 e6900fde0788a93384199da6466e002c 441 Gene3D G3DSA:3.40.50.300 138 313 8.9E-17 T 28-03-2018 CJD35_RS17550 4f139f64208c0a92de1e1d6b537179bc 674 Pfam PF01432 Peptidase family M3 222 671 5.5E-132 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CJD35_RS17550 4f139f64208c0a92de1e1d6b537179bc 674 Gene3D G3DSA:1.10.1370.10 135 423 1.7E-40 T 28-03-2018 CJD35_RS17550 4f139f64208c0a92de1e1d6b537179bc 674 Gene3D G3DSA:1.10.1370.10 449 674 2.5E-58 T 28-03-2018 CJD35_RS17550 4f139f64208c0a92de1e1d6b537179bc 674 Gene3D G3DSA:1.20.1050.40 8 133 3.9E-26 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CJD35_RS17550 4f139f64208c0a92de1e1d6b537179bc 674 SUPERFAMILY SSF55486 4 672 8.43E-160 T 28-03-2018 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 SUPERFAMILY SSF50156 221 346 1.01E-24 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 SMART SM00228 263 345 1.3E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 SMART SM00228 403 473 2.7E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 Gene3D G3DSA:2.30.42.10 384 484 7.3E-17 T 28-03-2018 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 Pfam PF13180 PDZ domain 390 461 1.7E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 Pfam PF13180 PDZ domain 263 350 1.3E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 Gene3D G3DSA:2.40.10.10 27 160 7.3E-38 T 28-03-2018 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 30 470 2.4E-137 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 SUPERFAMILY SSF50494 29 254 3.49E-65 T 28-03-2018 IPR009003 Peptidase S1, PA clan CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 SUPERFAMILY SSF50156 389 471 1.45E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 PRINTS PR00834 HtrA/DegQ protease family signature 217 234 3.6E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 PRINTS PR00834 HtrA/DegQ protease family signature 160 184 3.6E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 PRINTS PR00834 HtrA/DegQ protease family signature 93 105 3.6E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 PRINTS PR00834 HtrA/DegQ protease family signature 195 212 3.6E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 PRINTS PR00834 HtrA/DegQ protease family signature 303 315 3.6E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 PRINTS PR00834 HtrA/DegQ protease family signature 119 139 3.6E-52 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 Pfam PF13365 Trypsin-like peptidase domain 84 224 3.9E-37 T 28-03-2018 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 Gene3D G3DSA:2.40.10.10 161 264 1.6E-36 T 28-03-2018 CJD35_RS19315 9e69c8d7cce6464db96778078b41a624 484 Gene3D G3DSA:2.30.42.10 265 368 1.5E-27 T 28-03-2018 CJD35_RS18170 25b6cf1f83ec8906599f7b9edd7c439e 231 Pfam PF01965 DJ-1/PfpI family 26 223 8.9E-16 T 28-03-2018 IPR002818 DJ-1/PfpI CJD35_RS18170 25b6cf1f83ec8906599f7b9edd7c439e 231 SUPERFAMILY SSF52317 2 226 1.11E-68 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS18170 25b6cf1f83ec8906599f7b9edd7c439e 231 Gene3D G3DSA:3.40.50.880 1 230 1.2E-58 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS21290 25b6cf1f83ec8906599f7b9edd7c439e 231 Pfam PF01965 DJ-1/PfpI family 26 223 8.9E-16 T 28-03-2018 IPR002818 DJ-1/PfpI CJD35_RS21290 25b6cf1f83ec8906599f7b9edd7c439e 231 SUPERFAMILY SSF52317 2 226 1.11E-68 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS21290 25b6cf1f83ec8906599f7b9edd7c439e 231 Gene3D G3DSA:3.40.50.880 1 230 1.2E-58 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS01305 465c8f333e79b2fd31465bc623f42fa6 241 Pfam PF06904 Extensin-like protein C-terminus 63 241 5.8E-61 T 28-03-2018 IPR009683 Extensin-like, C-terminal CJD35_RS16360 63f3f5c4a62ddadec1f0088797e7789a 332 Gene3D G3DSA:3.40.50.150 13 330 1.1E-22 T 28-03-2018 CJD35_RS16360 63f3f5c4a62ddadec1f0088797e7789a 332 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 30 328 3.4E-111 T 28-03-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 CJD35_RS16360 63f3f5c4a62ddadec1f0088797e7789a 332 PIRSF PIRSF018005 1 331 9.2E-107 T 28-03-2018 IPR017804 Methyltransferase EgtD-like CJD35_RS16360 63f3f5c4a62ddadec1f0088797e7789a 332 SUPERFAMILY SSF53335 265 319 8.44E-17 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS16360 63f3f5c4a62ddadec1f0088797e7789a 332 SUPERFAMILY SSF53335 70 217 8.44E-17 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS16360 63f3f5c4a62ddadec1f0088797e7789a 332 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 30 329 1.2E-100 T 28-03-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 PRINTS PR00605 Class IC cytochrome C signature 219 230 2.5E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 PRINTS PR00605 Class IC cytochrome C signature 263 285 2.5E-5 T 28-03-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 16 60 2.2E-23 T 28-03-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 SUPERFAMILY SSF46626 207 295 5.53E-25 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 PIRSF PIRSF000006 3 292 4.3E-106 T 28-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 Gene3D G3DSA:1.10.760.10 72 206 1.6E-20 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 112 197 1.9E-9 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 209 285 2.7E-11 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 Gene3D G3DSA:1.10.760.10 207 318 1.1E-23 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 10 292 8.3E-109 T 28-03-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 SUPERFAMILY SSF46626 103 207 8.72E-27 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS13965 e1cdf353627242a53993d3bbf0c8176c 318 SUPERFAMILY SSF46626 33 67 8.72E-27 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 12 338 1.3E-146 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 SUPERFAMILY SSF53067 155 336 5.32E-48 T 28-03-2018 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 Gene3D G3DSA:3.30.420.40 167 254 8.1E-27 T 28-03-2018 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 Gene3D G3DSA:3.30.420.40 255 324 1.4E-10 T 28-03-2018 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 Gene3D G3DSA:3.30.420.40 10 166 2.5E-38 T 28-03-2018 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 Pfam PF06723 MreB/Mbl protein 13 338 1.4E-139 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 2.8E-59 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 2.8E-59 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 2.8E-59 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 307 333 2.8E-59 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 2.8E-59 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CJD35_RS12570 5ff025d6b272cd6341fb682c9eff141a 348 SUPERFAMILY SSF53067 13 151 1.59E-36 T 28-03-2018 CJD35_RS04695 3f6469952db2ace30c100a722085903c 222 Gene3D G3DSA:1.20.5.50 96 221 1.0E-7 T 28-03-2018 CJD35_RS04695 3f6469952db2ace30c100a722085903c 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 220 4.7E-84 T 28-03-2018 IPR014319 Phage shock protein, PspA CJD35_RS04695 3f6469952db2ace30c100a722085903c 222 Pfam PF04012 PspA/IM30 family 2 217 4.1E-37 T 28-03-2018 IPR007157 PspA/IM30 CJD35_RS17685 5cce040f5c8da655291c9df8e84b3534 464 Pfam PF07396 Phosphate-selective porin O and P 128 464 4.1E-41 T 28-03-2018 IPR010870 Phosphate-selective porin O/P CJD35_RS17685 5cce040f5c8da655291c9df8e84b3534 464 Gene3D G3DSA:2.40.160.10 71 464 1.8E-61 T 28-03-2018 CJD35_RS17685 5cce040f5c8da655291c9df8e84b3534 464 SUPERFAMILY SSF56935 95 462 4.19E-15 T 28-03-2018 CJD35_RS17685 5cce040f5c8da655291c9df8e84b3534 464 Gene3D G3DSA:1.20.5.10 19 50 0.0018 T 28-03-2018 CJD35_RS11070 04444d7aa0a2c22633dd8a7b8700f918 367 Pfam PF01266 FAD dependent oxidoreductase 5 342 3.1E-38 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CJD35_RS11070 04444d7aa0a2c22633dd8a7b8700f918 367 SUPERFAMILY SSF51905 3 211 1.02E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11070 04444d7aa0a2c22633dd8a7b8700f918 367 SUPERFAMILY SSF51905 304 362 1.02E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS11070 04444d7aa0a2c22633dd8a7b8700f918 367 Gene3D G3DSA:3.50.50.60 2 367 9.4E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS08095 aea610bd4ae6c3dea289b76117a6cb73 114 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 15.711 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS08095 aea610bd4ae6c3dea289b76117a6cb73 114 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 2 57 1.8E-17 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CJD35_RS08095 aea610bd4ae6c3dea289b76117a6cb73 114 SUPERFAMILY SSF63562 1 73 2.75E-19 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CJD35_RS08095 aea610bd4ae6c3dea289b76117a6cb73 114 Pfam PF01192 RNA polymerase Rpb6 8 57 1.2E-12 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CJD35_RS08095 aea610bd4ae6c3dea289b76117a6cb73 114 Gene3D G3DSA:3.90.940.10 1 97 5.4E-22 T 28-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CJD35_RS08095 aea610bd4ae6c3dea289b76117a6cb73 114 SMART SM01409 8 60 1.1E-13 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CJD35_RS00275 4979918cf64ddc53174283d20d750d66 244 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 30 240 7.5E-59 T 28-03-2018 IPR006214 Bax inhibitor 1-related CJD35_RS08010 4655a5c633c625873885175fd32567d6 391 Pfam PF14031 Putative serine dehydratase domain 268 374 6.7E-23 T 28-03-2018 IPR026956 D-serine dehydratase-like domain CJD35_RS08010 4655a5c633c625873885175fd32567d6 391 SMART SM01119 268 375 1.7E-45 T 28-03-2018 IPR026956 D-serine dehydratase-like domain CJD35_RS08010 4655a5c633c625873885175fd32567d6 391 Gene3D G3DSA:3.20.20.10 29 250 8.0E-38 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS08010 4655a5c633c625873885175fd32567d6 391 SUPERFAMILY SSF51419 28 251 6.54E-30 T 28-03-2018 IPR029066 PLP-binding barrel CJD35_RS08010 4655a5c633c625873885175fd32567d6 391 Pfam PF01168 Alanine racemase, N-terminal domain 28 253 1.0E-33 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CJD35_RS17455 879599fcd844fed675b51bf3422f1e17 334 Hamap MF_01962 Adenine deaminase. 7 319 84.431 T 28-03-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CJD35_RS17455 879599fcd844fed675b51bf3422f1e17 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 11 329 1.3E-117 T 28-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CJD35_RS17455 879599fcd844fed675b51bf3422f1e17 334 Gene3D G3DSA:3.20.20.140 1 334 4.0E-82 T 28-03-2018 CJD35_RS17455 879599fcd844fed675b51bf3422f1e17 334 SUPERFAMILY SSF51556 6 330 6.24E-87 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS17455 879599fcd844fed675b51bf3422f1e17 334 Pfam PF00962 Adenosine/AMP deaminase 11 322 7.7E-74 T 28-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CJD35_RS05120 543a8d1079912c569b3121fe38f672a7 322 SUPERFAMILY SSF48452 275 307 4.34E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS05120 543a8d1079912c569b3121fe38f672a7 322 SMART SM00028 275 308 9.2E-5 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CJD35_RS05120 543a8d1079912c569b3121fe38f672a7 322 Gene3D G3DSA:1.25.40.10 79 322 1.3E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS10740 6fcbc42794689fcee67b9bd97ed3b704 328 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 9 316 2.2E-89 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter CJD35_RS10740 6fcbc42794689fcee67b9bd97ed3b704 328 PIRSF PIRSF026166 1 327 1.9E-114 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter CJD35_RS16710 4341431286e59a51debdb94ef86f1956 126 Pfam PF04234 CopC domain 23 125 2.6E-19 T 28-03-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 CJD35_RS16710 4341431286e59a51debdb94ef86f1956 126 SUPERFAMILY SSF81296 22 126 2.8E-24 T 28-03-2018 IPR014756 Immunoglobulin E-set CJD35_RS16710 4341431286e59a51debdb94ef86f1956 126 Gene3D G3DSA:2.60.40.1220 22 126 1.7E-23 T 28-03-2018 CJD35_RS02610 fb6dea0cb61ba98ebbf9731e9bc4ab1a 119 Gene3D G3DSA:3.40.630.30 1 119 7.1E-8 T 28-03-2018 CJD35_RS02610 fb6dea0cb61ba98ebbf9731e9bc4ab1a 119 SUPERFAMILY SSF55729 5 117 1.39E-7 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS10200 14265b6763e2446805daae2f2898cf6c 98 Pfam PF01479 S4 domain 15 61 2.8E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS10200 14265b6763e2446805daae2f2898cf6c 98 SMART SM00363 14 77 1.4E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS10200 14265b6763e2446805daae2f2898cf6c 98 Gene3D G3DSA:3.10.290.10 12 97 1.4E-18 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CJD35_RS10200 14265b6763e2446805daae2f2898cf6c 98 SUPERFAMILY SSF55174 14 96 1.19E-20 T 28-03-2018 CJD35_RS09425 66bf93f6c89ac5d2020b0cf123075dff 385 Gene3D G3DSA:3.90.1150.10 276 378 1.8E-8 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS09425 66bf93f6c89ac5d2020b0cf123075dff 385 Gene3D G3DSA:3.40.640.10 79 275 1.5E-31 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS09425 66bf93f6c89ac5d2020b0cf123075dff 385 Pfam PF00155 Aminotransferase class I and II 100 379 1.8E-31 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJD35_RS09425 66bf93f6c89ac5d2020b0cf123075dff 385 SUPERFAMILY SSF53383 43 382 5.57E-62 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS12820 1483c377fdac4ac7aab5dcbd728642e0 291 SUPERFAMILY SSF55060 174 286 1.91E-25 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CJD35_RS12820 1483c377fdac4ac7aab5dcbd728642e0 291 PIRSF PIRSF010376 10 291 3.4E-76 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CJD35_RS12820 1483c377fdac4ac7aab5dcbd728642e0 291 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 11 291 29.514 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CJD35_RS12820 1483c377fdac4ac7aab5dcbd728642e0 291 SUPERFAMILY SSF54211 11 166 9.11E-35 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS12820 1483c377fdac4ac7aab5dcbd728642e0 291 Gene3D G3DSA:3.30.70.890 175 290 3.8E-25 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CJD35_RS12820 1483c377fdac4ac7aab5dcbd728642e0 291 Pfam PF00288 GHMP kinases N terminal domain 98 152 1.7E-8 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CJD35_RS12820 1483c377fdac4ac7aab5dcbd728642e0 291 Gene3D G3DSA:3.30.230.10 12 169 2.0E-38 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJD35_RS12820 1483c377fdac4ac7aab5dcbd728642e0 291 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 13 266 4.8E-54 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CJD35_RS12820 1483c377fdac4ac7aab5dcbd728642e0 291 Pfam PF08544 GHMP kinases C terminal 223 276 7.8E-6 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CJD35_RS01915 250e6858afbfc3494698f125d3ad6bc8 413 Gene3D G3DSA:1.20.950.20 134 375 0.16 T 28-03-2018 CJD35_RS01915 250e6858afbfc3494698f125d3ad6bc8 413 Pfam PF03929 PepSY-associated TM region 2 359 3.4E-63 T 28-03-2018 IPR005625 PepSY-associated TM protein CJD35_RS13035 728eb7c1b8ec4c4cb9fea0b2f589a010 38 Pfam PF08085 Entericidin EcnA/B family 17 34 1.3E-7 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 CJD35_RS15640 89a27cfd2a44b1357f2e1170d19e4de4 174 SUPERFAMILY SSF54427 36 169 1.29E-19 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS15640 89a27cfd2a44b1357f2e1170d19e4de4 174 Gene3D G3DSA:3.10.450.50 23 167 6.6E-14 T 28-03-2018 CJD35_RS15640 89a27cfd2a44b1357f2e1170d19e4de4 174 Pfam PF07366 SnoaL-like polyketide cyclase 40 161 3.9E-13 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS16590 315bf615ee1ca5c591e4d75741dc7efe 355 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CJD35_RS16590 315bf615ee1ca5c591e4d75741dc7efe 355 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 350 3.1E-88 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CJD35_RS16590 315bf615ee1ca5c591e4d75741dc7efe 355 Gene3D G3DSA:3.40.718.10 213 355 3.0E-57 T 28-03-2018 CJD35_RS16590 315bf615ee1ca5c591e4d75741dc7efe 355 Gene3D G3DSA:3.40.718.10 1 212 5.0E-62 T 28-03-2018 CJD35_RS16590 315bf615ee1ca5c591e4d75741dc7efe 355 SMART SM01329 5 350 2.2E-180 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CJD35_RS16590 315bf615ee1ca5c591e4d75741dc7efe 355 SUPERFAMILY SSF53659 2 354 6.72E-118 T 28-03-2018 CJD35_RS16590 315bf615ee1ca5c591e4d75741dc7efe 355 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 354 1.2E-172 T 28-03-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 CJD35_RS08835 409a0440f6afc7f75fc7a8367b07b2c8 151 SUPERFAMILY SSF51283 8 151 7.33E-52 T 28-03-2018 IPR029054 dUTPase-like CJD35_RS08835 409a0440f6afc7f75fc7a8367b07b2c8 151 Gene3D G3DSA:2.70.40.10 3 113 5.2E-44 T 28-03-2018 CJD35_RS08835 409a0440f6afc7f75fc7a8367b07b2c8 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 8 151 33.648 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CJD35_RS08835 409a0440f6afc7f75fc7a8367b07b2c8 151 Pfam PF00692 dUTPase 22 150 2.0E-34 T 28-03-2018 IPR029054 dUTPase-like CJD35_RS08835 409a0440f6afc7f75fc7a8367b07b2c8 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 13 150 1.7E-53 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CJD35_RS08835 409a0440f6afc7f75fc7a8367b07b2c8 151 Gene3D G3DSA:2.70.40.10 114 151 1.2E-15 T 28-03-2018 CJD35_RS09140 9854a83947d6feff82dc1bb731f4ebe2 121 SMART SM00448 2 115 8.3E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS09140 9854a83947d6feff82dc1bb731f4ebe2 121 SUPERFAMILY SSF52172 1 116 4.84E-35 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS09140 9854a83947d6feff82dc1bb731f4ebe2 121 Pfam PF00072 Response regulator receiver domain 5 114 8.5E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS09140 9854a83947d6feff82dc1bb731f4ebe2 121 Gene3D G3DSA:3.40.50.2300 1 118 3.7E-34 T 28-03-2018 CJD35_RS06505 5518ad8f481cbe5bfbfcc0d8d7e637c9 71 SUPERFAMILY SSF55331 1 61 2.75E-16 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily CJD35_RS06505 5518ad8f481cbe5bfbfcc0d8d7e637c9 71 Gene3D G3DSA:3.30.429.10 1 71 8.8E-17 T 28-03-2018 CJD35_RS06505 5518ad8f481cbe5bfbfcc0d8d7e637c9 71 Pfam PF01361 Tautomerase enzyme 2 60 6.6E-13 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CJD35_RS12035 72a213b7c958fc5dfc45f5215344162d 344 Pfam PF08238 Sel1 repeat 54 89 1.9E-9 T 28-03-2018 IPR006597 Sel1-like repeat CJD35_RS12035 72a213b7c958fc5dfc45f5215344162d 344 Pfam PF08238 Sel1 repeat 122 156 0.3 T 28-03-2018 IPR006597 Sel1-like repeat CJD35_RS12035 72a213b7c958fc5dfc45f5215344162d 344 Gene3D G3DSA:3.30.70.1070 264 343 1.7E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS12035 72a213b7c958fc5dfc45f5215344162d 344 Gene3D G3DSA:2.60.40.1180 28 103 2.0E-17 T 28-03-2018 CJD35_RS12035 72a213b7c958fc5dfc45f5215344162d 344 Gene3D G3DSA:2.60.40.1180 104 200 3.5E-7 T 28-03-2018 CJD35_RS12035 72a213b7c958fc5dfc45f5215344162d 344 SMART SM00671 54 89 5.5E-12 T 28-03-2018 IPR006597 Sel1-like repeat CJD35_RS12035 72a213b7c958fc5dfc45f5215344162d 344 SMART SM00671 122 157 2.6 T 28-03-2018 IPR006597 Sel1-like repeat CJD35_RS12035 72a213b7c958fc5dfc45f5215344162d 344 Pfam PF05036 Sporulation related domain 267 340 1.7E-14 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS12035 72a213b7c958fc5dfc45f5215344162d 344 SUPERFAMILY SSF81901 27 184 2.49E-29 T 28-03-2018 CJD35_RS12035 72a213b7c958fc5dfc45f5215344162d 344 SUPERFAMILY SSF110997 268 340 1.96E-11 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CJD35_RS06575 c74722c521d05f9e9d34620f479cd9d0 703 SUPERFAMILY SSF52540 505 682 6.56E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06575 c74722c521d05f9e9d34620f479cd9d0 703 Pfam PF02706 Chain length determinant protein 2 86 6.6E-8 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CJD35_RS06575 c74722c521d05f9e9d34620f479cd9d0 703 Pfam PF13614 AAA domain 516 643 7.7E-13 T 28-03-2018 IPR025669 AAA domain CJD35_RS06575 c74722c521d05f9e9d34620f479cd9d0 703 Gene3D G3DSA:3.40.50.300 504 697 3.8E-34 T 28-03-2018 CJD35_RS06575 c74722c521d05f9e9d34620f479cd9d0 703 Gene3D G3DSA:3.30.1890.10 25 409 1.5E-19 T 28-03-2018 CJD35_RS06575 c74722c521d05f9e9d34620f479cd9d0 703 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 505 682 5.2E-34 T 28-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CJD35_RS18450 91c32b1613702959e2f8d04147840684 186 SUPERFAMILY SSF50346 73 172 3.34E-12 T 28-03-2018 IPR011033 PRC-barrel-like CJD35_RS18450 91c32b1613702959e2f8d04147840684 186 Pfam PF05239 PRC-barrel domain 87 138 4.7E-7 T 28-03-2018 IPR027275 PRC-barrel domain CJD35_RS18450 91c32b1613702959e2f8d04147840684 186 Gene3D G3DSA:3.90.50.10 62 184 1.5E-15 T 28-03-2018 CJD35_RS16400 f6a71dfabf05eec15590dc4770aa2248 118 SUPERFAMILY SSF55620 9 116 4.84E-15 T 28-03-2018 CJD35_RS16400 f6a71dfabf05eec15590dc4770aa2248 118 Gene3D G3DSA:3.30.1130.10 6 118 2.1E-19 T 28-03-2018 CJD35_RS16400 f6a71dfabf05eec15590dc4770aa2248 118 Pfam PF02152 Dihydroneopterin aldolase 11 115 8.7E-18 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CJD35_RS16400 f6a71dfabf05eec15590dc4770aa2248 118 SMART SM00905 10 117 7.0E-18 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CJD35_RS00750 7c4fe603e0c1cc43795efedc07aea434 281 SUPERFAMILY SSF53448 2 145 5.06E-14 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS00750 7c4fe603e0c1cc43795efedc07aea434 281 Gene3D G3DSA:3.90.550.10 1 276 2.5E-13 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS00750 7c4fe603e0c1cc43795efedc07aea434 281 Pfam PF00535 Glycosyl transferase family 2 5 135 4.1E-8 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS12990 456a65b23a0df7be6de63f187b0795b3 49 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 7 44 1.4E-22 T 28-03-2018 IPR017136 Uncharacterised conserved protein UCP037205 CJD35_RS12990 456a65b23a0df7be6de63f187b0795b3 49 PIRSF PIRSF037205 3 49 1.2E-22 T 28-03-2018 IPR017136 Uncharacterised conserved protein UCP037205 CJD35_RS12990 456a65b23a0df7be6de63f187b0795b3 49 Gene3D G3DSA:3.30.50.10 8 47 6.7E-11 T 28-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 CJD35_RS17945 be44015c8f2922eeb1aadf64b4c05211 565 Pfam PF12146 Serine aminopeptidase, S33 65 173 8.6E-12 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 CJD35_RS17945 be44015c8f2922eeb1aadf64b4c05211 565 SUPERFAMILY SSF53474 32 194 1.08E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS17945 be44015c8f2922eeb1aadf64b4c05211 565 SUPERFAMILY SSF53474 221 272 1.08E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS17945 be44015c8f2922eeb1aadf64b4c05211 565 PRINTS PR00111 Alpha/beta hydrolase fold signature 153 166 9.6E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS17945 be44015c8f2922eeb1aadf64b4c05211 565 PRINTS PR00111 Alpha/beta hydrolase fold signature 139 152 9.6E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS17945 be44015c8f2922eeb1aadf64b4c05211 565 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 109 9.6E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS17945 be44015c8f2922eeb1aadf64b4c05211 565 Gene3D G3DSA:3.40.50.1820 28 275 2.1E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS15455 630694ffabe199a39bf09af3bf698a4a 357 SUPERFAMILY SSF50022 36 115 6.54E-5 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS15455 630694ffabe199a39bf09af3bf698a4a 357 SUPERFAMILY SSF55961 107 342 1.57E-25 T 28-03-2018 CJD35_RS15455 630694ffabe199a39bf09af3bf698a4a 357 Gene3D G3DSA:3.90.380.10 93 335 9.7E-26 T 28-03-2018 CJD35_RS20445 6b3fe887b1dbef2e600f601423a0db60 355 SUPERFAMILY SSF109709 164 250 5.89E-12 T 28-03-2018 CJD35_RS20445 6b3fe887b1dbef2e600f601423a0db60 355 SMART SM00470 71 171 5.7E-4 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS20445 6b3fe887b1dbef2e600f601423a0db60 355 SUPERFAMILY SSF110849 78 173 4.19E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS20445 6b3fe887b1dbef2e600f601423a0db60 355 Gene3D G3DSA:1.10.10.730 173 220 0.0014 T 28-03-2018 CJD35_RS20445 6b3fe887b1dbef2e600f601423a0db60 355 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 73 251 2.0E-25 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CJD35_RS20445 6b3fe887b1dbef2e600f601423a0db60 355 Gene3D G3DSA:3.90.1530.10 59 172 1.4E-12 T 28-03-2018 CJD35_RS20445 6b3fe887b1dbef2e600f601423a0db60 355 Pfam PF02195 ParB-like nuclease domain 74 170 7.9E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CJD35_RS09205 5bb56544e1b7586d772ae67d90ed3241 209 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 30 90 1.6E-9 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CJD35_RS09205 5bb56544e1b7586d772ae67d90ed3241 209 Gene3D G3DSA:3.30.1150.10 7 109 1.0E-8 T 28-03-2018 CJD35_RS09205 5bb56544e1b7586d772ae67d90ed3241 209 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 31 78 5.0E-8 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CJD35_RS09205 5bb56544e1b7586d772ae67d90ed3241 209 SUPERFAMILY SSF74653 29 78 8.76E-9 T 28-03-2018 CJD35_RS03540 9141415a3095b9745be654184d31fe77 349 Pfam PF00268 Ribonucleotide reductase, small chain 8 279 2.3E-74 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CJD35_RS03540 9141415a3095b9745be654184d31fe77 349 Gene3D G3DSA:1.10.620.20 5 293 6.3E-86 T 28-03-2018 CJD35_RS03540 9141415a3095b9745be654184d31fe77 349 SUPERFAMILY SSF47240 8 288 1.22E-86 T 28-03-2018 IPR009078 Ferritin-like superfamily CJD35_RS03540 9141415a3095b9745be654184d31fe77 349 PIRSF PIRSF000355 1 316 6.8E-116 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CJD35_RS06260 db1605587b06984ffb9f6056513414bb 141 SUPERFAMILY SSF51230 65 137 7.72E-9 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS06260 db1605587b06984ffb9f6056513414bb 141 Gene3D G3DSA:2.40.50.100 55 138 5.0E-11 T 28-03-2018 CJD35_RS06260 db1605587b06984ffb9f6056513414bb 141 Pfam PF00364 Biotin-requiring enzyme 86 137 1.8E-6 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS04140 c561ba23d4fb8132b99a1bd9003678f5 168 Gene3D G3DSA:2.40.160.20 6 168 9.7E-17 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS04140 c561ba23d4fb8132b99a1bd9003678f5 168 Pfam PF13505 Outer membrane protein beta-barrel domain 6 168 3.3E-16 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel CJD35_RS04140 c561ba23d4fb8132b99a1bd9003678f5 168 SUPERFAMILY SSF56925 23 168 5.76E-16 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS17800 05fc1f7e857b575ff9409828bbf4d11e 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 1.8E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS17800 05fc1f7e857b575ff9409828bbf4d11e 217 SUPERFAMILY SSF46689 9 85 3.44E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS17800 05fc1f7e857b575ff9409828bbf4d11e 217 SUPERFAMILY SSF48498 91 171 5.34E-7 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS17800 05fc1f7e857b575ff9409828bbf4d11e 217 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 91 172 8.4E-11 T 28-03-2018 CJD35_RS17800 05fc1f7e857b575ff9409828bbf4d11e 217 Gene3D G3DSA:1.10.357.10 5 209 1.3E-29 T 28-03-2018 CJD35_RS15920 adce9517ad8ca615bcfab897919d661a 427 SUPERFAMILY SSF103473 391 416 2.09E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS15920 adce9517ad8ca615bcfab897919d661a 427 SUPERFAMILY SSF103473 2 361 2.09E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS15920 adce9517ad8ca615bcfab897919d661a 427 Gene3D G3DSA:1.20.1250.20 190 422 1.6E-16 T 28-03-2018 CJD35_RS15920 adce9517ad8ca615bcfab897919d661a 427 Gene3D G3DSA:1.20.1250.20 1 189 6.8E-32 T 28-03-2018 CJD35_RS15920 adce9517ad8ca615bcfab897919d661a 427 Pfam PF07690 Major Facilitator Superfamily 3 351 9.7E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS15810 435463a0271c485b5f3e439cb8e17641 210 Gene3D G3DSA:3.40.30.10 1 101 2.4E-16 T 28-03-2018 CJD35_RS15810 435463a0271c485b5f3e439cb8e17641 210 Gene3D G3DSA:1.20.1050.10 102 207 6.3E-18 T 28-03-2018 CJD35_RS15810 435463a0271c485b5f3e439cb8e17641 210 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 74 1.6E-9 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS15810 435463a0271c485b5f3e439cb8e17641 210 SUPERFAMILY SSF47616 88 200 2.23E-20 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS15810 435463a0271c485b5f3e439cb8e17641 210 Pfam PF00043 Glutathione S-transferase, C-terminal domain 132 195 1.0E-4 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CJD35_RS15810 435463a0271c485b5f3e439cb8e17641 210 SUPERFAMILY SSF52833 2 76 5.28E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS06195 8443fa596589a3177e012f3201fe7c96 316 TIGRFAM TIGR04558 SoxH_rel_PQQ_1: quinoprotein relay system zinc metallohydrolase 1 23 306 2.2E-106 T 28-03-2018 IPR030811 Quinoprotein relay system zinc metallohydrolase 1 CJD35_RS06195 8443fa596589a3177e012f3201fe7c96 316 Gene3D G3DSA:3.60.15.10 22 256 1.3E-27 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS06195 8443fa596589a3177e012f3201fe7c96 316 Pfam PF00753 Metallo-beta-lactamase superfamily 52 234 8.4E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS06195 8443fa596589a3177e012f3201fe7c96 316 SUPERFAMILY SSF56281 6 312 2.52E-52 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS06195 8443fa596589a3177e012f3201fe7c96 316 SMART SM00849 54 234 9.1E-12 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS17265 0f3a85ad5aa5a0a868d75f4f201ade3e 523 Pfam PF04087 Domain of unknown function (DUF389) 84 218 6.5E-35 T 28-03-2018 IPR005240 Protein of unknown function DUF389 CJD35_RS07530 29c2cbf409f91fa3d98828f9af2289d0 223 Pfam PF02592 Putative vitamin uptake transporter 55 212 1.4E-36 T 28-03-2018 IPR003744 Queuosine precursor transporter CJD35_RS07530 29c2cbf409f91fa3d98828f9af2289d0 223 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 17 214 1.5E-28 T 28-03-2018 IPR003744 Queuosine precursor transporter CJD35_RS12175 71bce1c5df6fddb6436a0c1045059e94 347 Gene3D G3DSA:3.40.718.10 1 347 1.5E-119 T 28-03-2018 CJD35_RS12175 71bce1c5df6fddb6436a0c1045059e94 347 SMART SM01329 2 343 7.1E-189 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CJD35_RS12175 71bce1c5df6fddb6436a0c1045059e94 347 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 1 347 47.795 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CJD35_RS12175 71bce1c5df6fddb6436a0c1045059e94 347 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 343 5.8E-125 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CJD35_RS12175 71bce1c5df6fddb6436a0c1045059e94 347 SUPERFAMILY SSF53659 2 347 1.92E-117 T 28-03-2018 CJD35_RS12175 71bce1c5df6fddb6436a0c1045059e94 347 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 238 257 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CJD35_RS12175 71bce1c5df6fddb6436a0c1045059e94 347 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 3 343 1.6E-133 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CJD35_RS18455 97397f3a2190b928735223b5d5916d3a 187 SUPERFAMILY SSF55961 34 167 5.9E-25 T 28-03-2018 CJD35_RS18455 97397f3a2190b928735223b5d5916d3a 187 Gene3D G3DSA:3.30.530.20 31 182 1.0E-24 T 28-03-2018 IPR023393 START-like domain CJD35_RS18455 97397f3a2190b928735223b5d5916d3a 187 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 37 153 5.7E-13 T 28-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CJD35_RS02550 97fd35054e15d74fd368fc542f79b6e6 402 SUPERFAMILY SSF53383 5 390 1.38E-109 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS02550 97fd35054e15d74fd368fc542f79b6e6 402 Pfam PF00155 Aminotransferase class I and II 32 383 9.5E-61 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJD35_RS02550 97fd35054e15d74fd368fc542f79b6e6 402 Gene3D G3DSA:3.90.1150.10 8 254 5.2E-44 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS02550 97fd35054e15d74fd368fc542f79b6e6 402 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 236 249 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CJD35_RS02550 97fd35054e15d74fd368fc542f79b6e6 402 Gene3D G3DSA:3.90.1150.10 255 399 2.1E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS09560 7ff6cfd6eb40bbe6e1285f4f6cf8d8de 179 Gene3D G3DSA:3.20.16.10 15 178 8.2E-36 T 28-03-2018 IPR035443 Herpesvirus/Caudovirus protease domain CJD35_RS09560 7ff6cfd6eb40bbe6e1285f4f6cf8d8de 179 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 21 155 3.3E-30 T 28-03-2018 IPR006433 Prohead protease CJD35_RS09560 7ff6cfd6eb40bbe6e1285f4f6cf8d8de 179 Pfam PF04586 Caudovirus prohead serine protease 17 155 1.3E-41 T 28-03-2018 IPR006433 Prohead protease CJD35_RS19625 dd35621408e26e8fcc364657e93ca023 87 Pfam PF01527 Transposase 6 54 5.5E-9 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CJD35_RS19625 dd35621408e26e8fcc364657e93ca023 87 Gene3D G3DSA:1.10.10.10 40 61 3.0E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19625 dd35621408e26e8fcc364657e93ca023 87 SUPERFAMILY SSF46689 5 53 1.79E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS19625 dd35621408e26e8fcc364657e93ca023 87 Gene3D G3DSA:1.10.10.60 4 39 2.3E-6 T 28-03-2018 CJD35_RS06775 37e72b1072f9bef3b45686ac1053a3fa 122 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 120 28.813 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS06775 37e72b1072f9bef3b45686ac1053a3fa 122 PIRSF PIRSF002134 1 122 4.7E-45 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS06775 37e72b1072f9bef3b45686ac1053a3fa 122 Gene3D G3DSA:1.10.8.50 1 67 7.6E-26 T 28-03-2018 CJD35_RS06775 37e72b1072f9bef3b45686ac1053a3fa 122 SUPERFAMILY SSF46946 2 113 4.32E-44 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CJD35_RS06775 37e72b1072f9bef3b45686ac1053a3fa 122 Gene3D G3DSA:4.10.910.10 87 122 1.6E-27 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS06775 37e72b1072f9bef3b45686ac1053a3fa 122 Gene3D G3DSA:4.10.910.10 68 86 2.7E-17 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS06775 37e72b1072f9bef3b45686ac1053a3fa 122 Pfam PF00416 Ribosomal protein S13/S18 3 109 6.7E-32 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS06775 37e72b1072f9bef3b45686ac1053a3fa 122 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 4.4E-52 T 28-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS06775 37e72b1072f9bef3b45686ac1053a3fa 122 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 28-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS14065 d759e2c2df6269ab2f0a95d5411c79ba 131 Pfam PF01124 MAPEG family 8 126 2.8E-18 T 28-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CJD35_RS14065 d759e2c2df6269ab2f0a95d5411c79ba 131 SUPERFAMILY SSF161084 4 129 4.32E-26 T 28-03-2018 CJD35_RS14065 d759e2c2df6269ab2f0a95d5411c79ba 131 Gene3D G3DSA:1.20.120.550 1 131 7.6E-19 T 28-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CJD35_RS01930 460929d8ee54b7e8cea03da4e125ee5f 136 Gene3D G3DSA:1.10.1660.10 74 136 7.7E-17 T 28-03-2018 CJD35_RS01930 460929d8ee54b7e8cea03da4e125ee5f 136 Gene3D G3DSA:1.10.1660.10 17 73 8.7E-20 T 28-03-2018 CJD35_RS01930 460929d8ee54b7e8cea03da4e125ee5f 136 Pfam PF13411 MerR HTH family regulatory protein 21 86 1.0E-15 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS01930 460929d8ee54b7e8cea03da4e125ee5f 136 SUPERFAMILY SSF46955 21 130 1.03E-24 T 28-03-2018 IPR009061 Putative DNA-binding domain CJD35_RS01930 460929d8ee54b7e8cea03da4e125ee5f 136 SMART SM00422 21 88 2.1E-19 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CJD35_RS13390 c760f7c7bccc073a710be9ba208517bb 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 6.2E-43 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS13390 c760f7c7bccc073a710be9ba208517bb 112 SUPERFAMILY SSF54913 1 112 2.99E-46 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CJD35_RS13390 c760f7c7bccc073a710be9ba208517bb 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CJD35_RS13390 c760f7c7bccc073a710be9ba208517bb 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CJD35_RS13390 c760f7c7bccc073a710be9ba208517bb 112 Gene3D G3DSA:3.30.70.120 1 108 2.7E-49 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CJD35_RS13390 c760f7c7bccc073a710be9ba208517bb 112 SMART SM00938 4 105 2.8E-67 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS13390 c760f7c7bccc073a710be9ba208517bb 112 PRINTS PR00340 P-II protein signature 52 75 2.5E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS13390 c760f7c7bccc073a710be9ba208517bb 112 PRINTS PR00340 P-II protein signature 2 17 2.5E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS13390 c760f7c7bccc073a710be9ba208517bb 112 PRINTS PR00340 P-II protein signature 23 41 2.5E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS13390 c760f7c7bccc073a710be9ba208517bb 112 PRINTS PR00340 P-II protein signature 83 103 2.5E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS13390 c760f7c7bccc073a710be9ba208517bb 112 PIRSF PIRSF039144 1 112 8.8E-56 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CJD35_RS15515 7457fb1a4736fedabc4ef1e8074f1f72 309 Gene3D G3DSA:3.20.20.70 1 309 1.3E-105 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS15515 7457fb1a4736fedabc4ef1e8074f1f72 309 Pfam PF05853 beta-keto acid cleavage enzyme 5 301 3.8E-102 T 28-03-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247|KEGG: 00600+2.3.1.24 CJD35_RS17780 d65b0e9e4dc3b1f605a6f6d4cbabe43c 343 SUPERFAMILY SSF111369 15 258 4.05E-75 T 28-03-2018 CJD35_RS17780 d65b0e9e4dc3b1f605a6f6d4cbabe43c 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 3 336 2.6E-81 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CJD35_RS17780 d65b0e9e4dc3b1f605a6f6d4cbabe43c 343 Gene3D G3DSA:2.40.50.100 28 84 5.9E-17 T 28-03-2018 CJD35_RS17780 d65b0e9e4dc3b1f605a6f6d4cbabe43c 343 Gene3D G3DSA:2.40.50.100 131 322 1.3E-5 T 28-03-2018 CJD35_RS17780 d65b0e9e4dc3b1f605a6f6d4cbabe43c 343 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 28 254 9.9E-18 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJD35_RS17780 d65b0e9e4dc3b1f605a6f6d4cbabe43c 343 Gene3D G3DSA:1.10.287.470 85 128 6.7E-8 T 28-03-2018 CJD35_RS17705 7fede838dd61c7520c1cd0a102215b1e 249 Gene3D G3DSA:1.20.1050.10 102 234 8.2E-18 T 28-03-2018 CJD35_RS17705 7fede838dd61c7520c1cd0a102215b1e 249 SUPERFAMILY SSF47616 85 228 1.85E-16 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS17705 7fede838dd61c7520c1cd0a102215b1e 249 SUPERFAMILY SSF52833 5 96 2.44E-7 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS17705 7fede838dd61c7520c1cd0a102215b1e 249 Gene3D G3DSA:3.40.30.10 2 101 2.2E-9 T 28-03-2018 CJD35_RS17705 7fede838dd61c7520c1cd0a102215b1e 249 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 221 1.8E-5 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CJD35_RS07310 09e325e4bc7d5a886ccc0d94b9265d84 191 Pfam PF06041 Bacterial protein of unknown function (DUF924) 20 183 7.6E-53 T 28-03-2018 IPR010323 Protein of unknown function DUF924 CJD35_RS07310 09e325e4bc7d5a886ccc0d94b9265d84 191 SUPERFAMILY SSF48452 14 183 7.96E-55 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS07310 09e325e4bc7d5a886ccc0d94b9265d84 191 Gene3D G3DSA:1.25.40.10 92 190 3.2E-30 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS07310 09e325e4bc7d5a886ccc0d94b9265d84 191 Gene3D G3DSA:1.20.58.320 9 91 3.4E-19 T 28-03-2018 CJD35_RS15015 289b6ea353def1487c33744dbadfbb90 279 SUPERFAMILY SSF56529 20 268 2.59E-41 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS15015 289b6ea353def1487c33744dbadfbb90 279 Gene3D G3DSA:3.90.850.10 13 278 1.2E-25 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS17760 aed9f256d0e75d3d98c035b6896afa9f 191 Gene3D G3DSA:1.10.10.10 71 161 1.5E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS06860 8679a8243fd1d5b2d203b6a3b659b53c 360 Gene3D G3DSA:3.30.200.20 16 121 6.7E-29 T 28-03-2018 CJD35_RS06860 8679a8243fd1d5b2d203b6a3b659b53c 360 Pfam PF01636 Phosphotransferase enzyme family 44 281 1.4E-55 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CJD35_RS06860 8679a8243fd1d5b2d203b6a3b659b53c 360 SUPERFAMILY SSF56112 22 329 5.41E-61 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS06860 8679a8243fd1d5b2d203b6a3b659b53c 360 Gene3D G3DSA:3.90.1200.10 122 314 6.5E-36 T 28-03-2018 CJD35_RS12610 2a86051b624f28ce917e72806da845f1 189 Gene3D G3DSA:3.40.50.1470 1 188 5.7E-63 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CJD35_RS12610 2a86051b624f28ce917e72806da845f1 189 Pfam PF01195 Peptidyl-tRNA hydrolase 5 181 6.3E-48 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CJD35_RS12610 2a86051b624f28ce917e72806da845f1 189 SUPERFAMILY SSF53178 1 183 8.24E-63 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CJD35_RS12610 2a86051b624f28ce917e72806da845f1 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 163 1.8E-51 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CJD35_RS12610 2a86051b624f28ce917e72806da845f1 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CJD35_RS12610 2a86051b624f28ce917e72806da845f1 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 31.708 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CJD35_RS02490 a752c0ce7f662164c4e82b2df80e8bb0 249 Pfam PF01618 MotA/TolQ/ExbB proton channel family 83 210 2.2E-33 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CJD35_RS02900 7e9281b2022a881a76c82dd75334b8c6 437 SMART SM00283 177 431 9.6E-18 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS02900 7e9281b2022a881a76c82dd75334b8c6 437 SUPERFAMILY SSF58104 176 426 1.74E-36 T 28-03-2018 CJD35_RS02900 7e9281b2022a881a76c82dd75334b8c6 437 Gene3D G3DSA:3.10.580.10 21 168 8.7E-6 T 28-03-2018 CJD35_RS02900 7e9281b2022a881a76c82dd75334b8c6 437 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 3.2E-13 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS02900 7e9281b2022a881a76c82dd75334b8c6 437 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 275 302 3.2E-13 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS02900 7e9281b2022a881a76c82dd75334b8c6 437 SUPERFAMILY SSF54631 22 140 6.5E-7 T 28-03-2018 CJD35_RS02900 7e9281b2022a881a76c82dd75334b8c6 437 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 256 399 6.2E-25 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS02900 7e9281b2022a881a76c82dd75334b8c6 437 Gene3D G3DSA:1.10.287.950 202 430 1.2E-32 T 28-03-2018 CJD35_RS15575 35a7c7b96515f514b8d13f48f8d575aa 246 Gene3D G3DSA:1.20.120.530 77 235 5.2E-31 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CJD35_RS15575 35a7c7b96515f514b8d13f48f8d575aa 246 SUPERFAMILY SSF48008 85 225 9.15E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CJD35_RS15575 35a7c7b96515f514b8d13f48f8d575aa 246 Gene3D G3DSA:1.10.10.10 8 76 9.1E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS15575 35a7c7b96515f514b8d13f48f8d575aa 246 SMART SM00345 21 79 2.2E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS15575 35a7c7b96515f514b8d13f48f8d575aa 246 SMART SM00895 89 219 6.8E-16 T 28-03-2018 IPR011711 GntR, C-terminal CJD35_RS15575 35a7c7b96515f514b8d13f48f8d575aa 246 Pfam PF07729 FCD domain 89 218 4.2E-23 T 28-03-2018 IPR011711 GntR, C-terminal CJD35_RS15575 35a7c7b96515f514b8d13f48f8d575aa 246 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 9.4E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS15575 35a7c7b96515f514b8d13f48f8d575aa 246 SUPERFAMILY SSF46785 11 105 1.09E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS19985 1ed0444fb1fd20d73d3bf18a5c5b6c76 102 SUPERFAMILY SSF82057 31 101 1.01E-22 T 28-03-2018 CJD35_RS19985 1ed0444fb1fd20d73d3bf18a5c5b6c76 102 Gene3D G3DSA:2.30.30.40 34 101 1.6E-27 T 28-03-2018 CJD35_RS19985 1ed0444fb1fd20d73d3bf18a5c5b6c76 102 Pfam PF03831 PhnA domain 35 101 1.1E-26 T 28-03-2018 IPR013988 PhnA protein, C-terminal CJD35_RS15750 92c4ba85b40332e4f63f020dbf0036c0 121 Gene3D G3DSA:3.10.450.50 1 118 5.4E-9 T 28-03-2018 CJD35_RS15750 92c4ba85b40332e4f63f020dbf0036c0 121 SUPERFAMILY SSF54427 5 111 2.16E-8 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS10190 816c83db0449a29b6bd94fe421ff6110 175 SMART SM01058 7 117 1.5E-35 T 28-03-2018 IPR003711 CarD-like/TRCF domain CJD35_RS10190 816c83db0449a29b6bd94fe421ff6110 175 Pfam PF02559 CarD-like/TRCF domain 8 115 5.5E-20 T 28-03-2018 IPR003711 CarD-like/TRCF domain CJD35_RS10190 816c83db0449a29b6bd94fe421ff6110 175 SUPERFAMILY SSF141259 4 72 2.48E-17 T 28-03-2018 IPR003711 CarD-like/TRCF domain CJD35_RS04085 1ff56f056e04366616cd6d89caaf1f67 177 Gene3D G3DSA:3.40.30.10 8 174 3.2E-28 T 28-03-2018 CJD35_RS04085 1ff56f056e04366616cd6d89caaf1f67 177 Pfam PF00578 AhpC/TSA family 26 153 1.3E-19 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CJD35_RS04085 1ff56f056e04366616cd6d89caaf1f67 177 SUPERFAMILY SSF52833 21 174 7.23E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS14060 4c3a0910052e66bf96daeefddf4b5d5d 230 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 17 170 3.6E-11 T 28-03-2018 IPR010239 Conserved hypothetical protein CHP02001 CJD35_RS06685 a8139791883e1f348b593dd2967b3be0 327 Pfam PF07549 SecD/SecF GG Motif 40 58 1.1E-4 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CJD35_RS06685 a8139791883e1f348b593dd2967b3be0 327 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 13 300 26.455 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CJD35_RS06685 a8139791883e1f348b593dd2967b3be0 327 PRINTS PR01755 Bacterial translocase SecF protein signature 40 55 4.6E-26 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJD35_RS06685 a8139791883e1f348b593dd2967b3be0 327 PRINTS PR01755 Bacterial translocase SecF protein signature 157 171 4.6E-26 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJD35_RS06685 a8139791883e1f348b593dd2967b3be0 327 PRINTS PR01755 Bacterial translocase SecF protein signature 205 223 4.6E-26 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJD35_RS06685 a8139791883e1f348b593dd2967b3be0 327 PRINTS PR01755 Bacterial translocase SecF protein signature 237 252 4.6E-26 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJD35_RS06685 a8139791883e1f348b593dd2967b3be0 327 SUPERFAMILY SSF82866 76 296 1.44E-37 T 28-03-2018 CJD35_RS06685 a8139791883e1f348b593dd2967b3be0 327 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 41 289 3.6E-75 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CJD35_RS06685 a8139791883e1f348b593dd2967b3be0 327 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 123 286 4.8E-49 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CJD35_RS06685 a8139791883e1f348b593dd2967b3be0 327 Pfam PF02355 Protein export membrane protein 118 296 9.0E-61 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CJD35_RS06685 a8139791883e1f348b593dd2967b3be0 327 Gene3D G3DSA:1.20.1640.10 98 310 1.4E-29 T 28-03-2018 CJD35_RS05290 7e3918744c8d9ecc22d387403805b7a6 812 SMART SM00382 441 705 7.9E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS05290 7e3918744c8d9ecc22d387403805b7a6 812 SUPERFAMILY SSF52540 401 747 1.93E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05290 7e3918744c8d9ecc22d387403805b7a6 812 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 177 389 1.7E-14 T 28-03-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 CJD35_RS05290 7e3918744c8d9ecc22d387403805b7a6 812 Gene3D G3DSA:3.40.50.300 413 754 2.8E-33 T 28-03-2018 CJD35_RS03055 1bee531f0dedd218fdc93e09bdf8fd6e 131 Gene3D G3DSA:1.20.120.340 8 131 6.2E-26 T 28-03-2018 CJD35_RS03055 1bee531f0dedd218fdc93e09bdf8fd6e 131 SUPERFAMILY SSF101116 15 130 1.96E-24 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CJD35_RS03055 1bee531f0dedd218fdc93e09bdf8fd6e 131 Pfam PF02561 Flagellar protein FliS 18 130 3.0E-20 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CJD35_RS09720 c8b1e2e24864528694287f75c550eedd 241 Pfam PF13489 Methyltransferase domain 31 171 9.9E-13 T 28-03-2018 CJD35_RS09720 c8b1e2e24864528694287f75c550eedd 241 Gene3D G3DSA:3.40.50.150 2 220 2.9E-25 T 28-03-2018 CJD35_RS09720 c8b1e2e24864528694287f75c550eedd 241 SUPERFAMILY SSF53335 16 189 3.31E-33 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS05905 98e30f53047b06e98666a4a3ad80ac15 260 Pfam PF06577 Protein of unknown function (DUF1134) 102 260 1.7E-70 T 28-03-2018 IPR008325 Uncharacterised conserved protein UCP033924 CJD35_RS19300 a94d6f91b109faa6fcc54817f6b0d952 299 Pfam PF01564 Spermine/spermidine synthase domain 89 212 1.4E-5 T 28-03-2018 CJD35_RS19300 a94d6f91b109faa6fcc54817f6b0d952 299 Gene3D G3DSA:3.40.50.150 62 298 4.7E-21 T 28-03-2018 CJD35_RS19300 a94d6f91b109faa6fcc54817f6b0d952 299 SUPERFAMILY SSF53335 58 256 5.28E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS12645 74fe1cc280e44630906ebb0a816c12cd 161 Gene3D G3DSA:1.10.150.20 70 94 0.53 T 28-03-2018 CJD35_RS12645 74fe1cc280e44630906ebb0a816c12cd 161 Gene3D G3DSA:1.10.150.20 95 145 1.6E-7 T 28-03-2018 CJD35_RS15380 ff4dcacd20d9deef08db394e57be5ba2 258 Gene3D G3DSA:3.40.50.720 2 257 1.3E-56 T 28-03-2018 CJD35_RS15380 ff4dcacd20d9deef08db394e57be5ba2 258 SUPERFAMILY SSF51735 4 255 2.39E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15380 ff4dcacd20d9deef08db394e57be5ba2 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS15380 ff4dcacd20d9deef08db394e57be5ba2 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 252 1.1E-37 T 28-03-2018 CJD35_RS15380 ff4dcacd20d9deef08db394e57be5ba2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.0E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15380 ff4dcacd20d9deef08db394e57be5ba2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.0E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15380 ff4dcacd20d9deef08db394e57be5ba2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 1.0E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15380 ff4dcacd20d9deef08db394e57be5ba2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.0E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15380 ff4dcacd20d9deef08db394e57be5ba2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 1.0E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15380 ff4dcacd20d9deef08db394e57be5ba2 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.0E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12490 b021c71f6eaa76d8046d1f38020fd685 98 Gene3D G3DSA:3.30.70.100 1 91 2.3E-18 T 28-03-2018 CJD35_RS12490 b021c71f6eaa76d8046d1f38020fd685 98 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 77 3.6E-14 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CJD35_RS12490 b021c71f6eaa76d8046d1f38020fd685 98 SUPERFAMILY SSF54909 1 87 4.92E-24 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS04320 2702b7e6374f0fd63cb257797979fdba 301 Pfam PF02678 Pirin 21 126 6.4E-31 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CJD35_RS04320 2702b7e6374f0fd63cb257797979fdba 301 Gene3D G3DSA:2.60.120.10 150 247 2.3E-18 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS04320 2702b7e6374f0fd63cb257797979fdba 301 PIRSF PIRSF006232 4 286 1.7E-77 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CJD35_RS04320 2702b7e6374f0fd63cb257797979fdba 301 Pfam PF05726 Pirin C-terminal cupin domain 179 277 1.0E-19 T 28-03-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 CJD35_RS04320 2702b7e6374f0fd63cb257797979fdba 301 SUPERFAMILY SSF51182 9 289 2.89E-76 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS04320 2702b7e6374f0fd63cb257797979fdba 301 Gene3D G3DSA:2.60.120.10 13 149 1.2E-38 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS09775 20adf9ecacb71435e8f72d5909f5f299 73 Pfam PF06945 Protein of unknown function (DUF1289) 7 50 9.9E-19 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 CJD35_RS10245 912603b38a866a94f64ffad3f64d16cc 459 PRINTS PR00175 Sodium/alanine symporter signature 101 123 1.9E-30 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJD35_RS10245 912603b38a866a94f64ffad3f64d16cc 459 PRINTS PR00175 Sodium/alanine symporter signature 197 215 1.9E-30 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJD35_RS10245 912603b38a866a94f64ffad3f64d16cc 459 PRINTS PR00175 Sodium/alanine symporter signature 315 333 1.9E-30 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJD35_RS10245 912603b38a866a94f64ffad3f64d16cc 459 PRINTS PR00175 Sodium/alanine symporter signature 419 439 1.9E-30 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJD35_RS10245 912603b38a866a94f64ffad3f64d16cc 459 PRINTS PR00175 Sodium/alanine symporter signature 225 244 1.9E-30 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJD35_RS10245 912603b38a866a94f64ffad3f64d16cc 459 PRINTS PR00175 Sodium/alanine symporter signature 358 380 1.9E-30 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJD35_RS10245 912603b38a866a94f64ffad3f64d16cc 459 TIGRFAM TIGR00835 agcS: amino acid carrier protein 31 448 9.8E-91 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJD35_RS10245 912603b38a866a94f64ffad3f64d16cc 459 Pfam PF01235 Sodium:alanine symporter family 65 455 5.4E-96 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CJD35_RS16615 13c1d8a2c88af6c6be5245e99838cad8 328 SUPERFAMILY SSF56281 33 326 7.47E-41 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS16615 13c1d8a2c88af6c6be5245e99838cad8 328 SMART SM00849 50 244 5.2E-6 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS16615 13c1d8a2c88af6c6be5245e99838cad8 328 Gene3D G3DSA:3.60.15.10 33 328 7.3E-44 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS16615 13c1d8a2c88af6c6be5245e99838cad8 328 Pfam PF12706 Beta-lactamase superfamily domain 63 291 3.7E-17 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS05110 d5058b730add76e3be7482957f2cc276 705 Gene3D G3DSA:3.40.50.300 18 207 3.8E-4 T 28-03-2018 CJD35_RS05110 d5058b730add76e3be7482957f2cc276 705 SMART SM00382 197 584 3.0E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS05110 d5058b730add76e3be7482957f2cc276 705 Pfam PF07728 AAA domain (dynein-related subfamily) 480 574 2.1E-9 T 28-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CJD35_RS05110 d5058b730add76e3be7482957f2cc276 705 Gene3D G3DSA:3.40.50.300 208 583 2.6E-21 T 28-03-2018 CJD35_RS05110 d5058b730add76e3be7482957f2cc276 705 SUPERFAMILY SSF88697 387 452 1.14E-6 T 28-03-2018 IPR015947 PUA-like domain CJD35_RS05110 d5058b730add76e3be7482957f2cc276 705 SUPERFAMILY SSF52540 494 577 8.42E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05110 d5058b730add76e3be7482957f2cc276 705 SUPERFAMILY SSF52540 196 234 8.42E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS17590 1d878bb7be4ce8144a1e2d6e5ed18d9f 861 SUPERFAMILY SSF56935 246 297 8.43E-116 T 28-03-2018 CJD35_RS17590 1d878bb7be4ce8144a1e2d6e5ed18d9f 861 SUPERFAMILY SSF56935 20 217 8.43E-116 T 28-03-2018 CJD35_RS17590 1d878bb7be4ce8144a1e2d6e5ed18d9f 861 SUPERFAMILY SSF56935 377 537 8.43E-116 T 28-03-2018 CJD35_RS17590 1d878bb7be4ce8144a1e2d6e5ed18d9f 861 SUPERFAMILY SSF56935 587 861 8.43E-116 T 28-03-2018 CJD35_RS17590 1d878bb7be4ce8144a1e2d6e5ed18d9f 861 Pfam PF00593 TonB dependent receptor 357 859 1.7E-47 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17590 1d878bb7be4ce8144a1e2d6e5ed18d9f 861 Gene3D G3DSA:2.40.170.20 169 861 1.0E-70 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17590 1d878bb7be4ce8144a1e2d6e5ed18d9f 861 Gene3D G3DSA:2.170.130.10 24 168 4.4E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17590 1d878bb7be4ce8144a1e2d6e5ed18d9f 861 Pfam PF07715 TonB-dependent Receptor Plug Domain 47 158 3.1E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS19760 86f59faeaec99ff70e35a080707967a4 177 Pfam PF10502 Signal peptidase, peptidase S26 44 176 2.5E-17 T 28-03-2018 IPR019533 Peptidase S26 CJD35_RS19760 86f59faeaec99ff70e35a080707967a4 177 SUPERFAMILY SSF51306 46 176 2.25E-19 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS19760 86f59faeaec99ff70e35a080707967a4 177 Gene3D G3DSA:2.10.109.10 22 177 7.5E-9 T 28-03-2018 CJD35_RS04925 74a876f7f9dc8e1eeb6410d3d87103a9 294 Gene3D G3DSA:3.60.15.10 22 292 8.8E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS04925 74a876f7f9dc8e1eeb6410d3d87103a9 294 Pfam PF00753 Metallo-beta-lactamase superfamily 56 247 3.8E-21 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS04925 74a876f7f9dc8e1eeb6410d3d87103a9 294 SMART SM00849 57 247 7.1E-24 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS04925 74a876f7f9dc8e1eeb6410d3d87103a9 294 SUPERFAMILY SSF56281 44 255 4.85E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase CJD35_RS01180 81db07a0ec7c0eeaae08f5fd44fd54a6 289 SUPERFAMILY SSF47616 180 257 1.36E-33 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS01180 81db07a0ec7c0eeaae08f5fd44fd54a6 289 SUPERFAMILY SSF47616 116 151 1.36E-33 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS01180 81db07a0ec7c0eeaae08f5fd44fd54a6 289 Gene3D G3DSA:3.40.30.10 31 140 5.7E-22 T 28-03-2018 CJD35_RS01180 81db07a0ec7c0eeaae08f5fd44fd54a6 289 Gene3D G3DSA:1.20.1050.10 174 271 1.1E-21 T 28-03-2018 CJD35_RS01180 81db07a0ec7c0eeaae08f5fd44fd54a6 289 Pfam PF02798 Glutathione S-transferase, N-terminal domain 43 126 2.1E-7 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS01180 81db07a0ec7c0eeaae08f5fd44fd54a6 289 Gene3D G3DSA:1.20.1050.10 141 173 5.4E-8 T 28-03-2018 CJD35_RS01180 81db07a0ec7c0eeaae08f5fd44fd54a6 289 Pfam PF13410 Glutathione S-transferase, C-terminal domain 180 242 2.1E-8 T 28-03-2018 CJD35_RS01180 81db07a0ec7c0eeaae08f5fd44fd54a6 289 SUPERFAMILY SSF52833 38 129 1.19E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS07550 270f3daa1e7157c340bb0758a770555a 105 SMART SM01152 7 88 6.1E-26 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS07550 270f3daa1e7157c340bb0758a770555a 105 Gene3D G3DSA:3.30.1200.10 1 104 5.1E-24 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS07550 270f3daa1e7157c340bb0758a770555a 105 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 11 86 6.6E-22 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS07550 270f3daa1e7157c340bb0758a770555a 105 SUPERFAMILY SSF69786 3 91 3.27E-21 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS07550 270f3daa1e7157c340bb0758a770555a 105 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 100 16.193 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CJD35_RS15850 e93645e27ae655df2bd92248de69418b 146 Gene3D G3DSA:3.10.450.50 2 138 3.1E-15 T 28-03-2018 CJD35_RS15850 e93645e27ae655df2bd92248de69418b 146 SUPERFAMILY SSF54427 2 133 3.07E-20 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS15850 e93645e27ae655df2bd92248de69418b 146 Pfam PF12680 SnoaL-like domain 10 119 7.1E-8 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS04690 6c7cd04fabbc9eb6bae2f0189dbb87ad 93 Pfam PF06667 Phage shock protein B 1 72 3.0E-24 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CJD35_RS04690 6c7cd04fabbc9eb6bae2f0189dbb87ad 93 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 4 74 4.4E-22 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CJD35_RS01095 4699cb05c9c2c1508835c82745a21c56 114 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 4.6E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS01095 4699cb05c9c2c1508835c82745a21c56 114 Gene3D G3DSA:1.10.10.10 1 73 3.3E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS01095 4699cb05c9c2c1508835c82745a21c56 114 Gene3D G3DSA:1.10.287.100 74 112 4.6E-8 T 28-03-2018 CJD35_RS01095 4699cb05c9c2c1508835c82745a21c56 114 SUPERFAMILY SSF46785 4 75 1.28E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS01095 4699cb05c9c2c1508835c82745a21c56 114 SMART SM00345 12 71 1.4E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CJD35_RS15585 96f91b88150a7f68e5df855b73d43737 318 Gene3D G3DSA:3.10.180.10 153 304 1.0E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS15585 96f91b88150a7f68e5df855b73d43737 318 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 163 270 1.3E-11 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS15585 96f91b88150a7f68e5df855b73d43737 318 Gene3D G3DSA:3.10.180.10 12 140 5.6E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS15585 96f91b88150a7f68e5df855b73d43737 318 SUPERFAMILY SSF54593 13 275 1.14E-29 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS01240 8c1bc981499d4dc3b41938be84f3abce 307 Pfam PF12697 Alpha/beta hydrolase family 80 282 2.9E-11 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS01240 8c1bc981499d4dc3b41938be84f3abce 307 Gene3D G3DSA:3.40.50.1820 40 302 1.1E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS01240 8c1bc981499d4dc3b41938be84f3abce 307 SUPERFAMILY SSF53474 26 300 7.1E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS10150 b5ff4445f1233a58908ca849b010539e 347 Gene3D G3DSA:2.40.50.100 28 72 0.0085 T 28-03-2018 CJD35_RS10150 b5ff4445f1233a58908ca849b010539e 347 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 254 1.4E-33 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CJD35_RS10150 b5ff4445f1233a58908ca849b010539e 347 Gene3D G3DSA:2.40.50.100 73 165 4.5E-12 T 28-03-2018 CJD35_RS10150 b5ff4445f1233a58908ca849b010539e 347 SUPERFAMILY SSF111369 43 259 7.85E-39 T 28-03-2018 CJD35_RS10150 b5ff4445f1233a58908ca849b010539e 347 Gene3D G3DSA:2.40.50.100 166 324 0.1 T 28-03-2018 CJD35_RS10150 b5ff4445f1233a58908ca849b010539e 347 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 30 334 3.3E-74 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CJD35_RS14030 00c32212546c54d8276e445d39436c62 117 Pfam PF07238 PilZ domain 21 108 1.7E-9 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CJD35_RS14030 00c32212546c54d8276e445d39436c62 117 Gene3D G3DSA:2.40.10.220 15 111 3.4E-10 T 28-03-2018 CJD35_RS14030 00c32212546c54d8276e445d39436c62 117 SUPERFAMILY SSF141371 19 97 3.73E-11 T 28-03-2018 CJD35_RS05730 4d9cf6240acc92570bdca22fb9628e7a 141 Pfam PF03692 Putative zinc- or iron-chelating domain 20 88 1.9E-10 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CJD35_RS05730 4d9cf6240acc92570bdca22fb9628e7a 141 PIRSF PIRSF006173 1 141 8.7E-59 T 28-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CJD35_RS15445 139dabff52327940389a613caf699e29 221 Gene3D G3DSA:1.10.10.60 8 71 5.2E-13 T 28-03-2018 CJD35_RS15445 139dabff52327940389a613caf699e29 221 Gene3D G3DSA:1.10.357.10 72 218 1.8E-12 T 28-03-2018 CJD35_RS15445 139dabff52327940389a613caf699e29 221 SUPERFAMILY SSF46689 22 98 7.7E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS15445 139dabff52327940389a613caf699e29 221 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 72 2.7E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS11100 a37e424902827bcece6507e8f3f4e87d 129 SUPERFAMILY SSF54975 1 92 4.91E-31 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CJD35_RS11100 a37e424902827bcece6507e8f3f4e87d 129 Pfam PF04940 Sensors of blue-light using FAD 1 88 1.8E-26 T 28-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CJD35_RS11100 a37e424902827bcece6507e8f3f4e87d 129 SMART SM01034 1 89 1.5E-33 T 28-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CJD35_RS14820 b4fc79e16ea0bcc0252d37d1b0c0b83d 221 Gene3D G3DSA:1.20.5.1230 39 195 3.0E-4 T 28-03-2018 CJD35_RS12045 175c303c3d04bb25c9566fce5b284f40 177 Gene3D G3DSA:1.10.1220.10 89 160 4.9E-10 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS12045 175c303c3d04bb25c9566fce5b284f40 177 SUPERFAMILY SSF47598 100 159 2.06E-8 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CJD35_RS03605 0c7af0f8f923dd887b58a9c068f25289 344 SUPERFAMILY SSF53822 72 342 2.36E-57 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CJD35_RS03605 0c7af0f8f923dd887b58a9c068f25289 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 9.5E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS03605 0c7af0f8f923dd887b58a9c068f25289 344 Gene3D G3DSA:1.10.260.40 13 64 1.1E-21 T 28-03-2018 CJD35_RS03605 0c7af0f8f923dd887b58a9c068f25289 344 SUPERFAMILY SSF47413 13 70 9.06E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS03605 0c7af0f8f923dd887b58a9c068f25289 344 Gene3D G3DSA:3.40.50.2300 65 187 6.6E-23 T 28-03-2018 CJD35_RS03605 0c7af0f8f923dd887b58a9c068f25289 344 SMART SM00354 12 82 2.9E-22 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS03605 0c7af0f8f923dd887b58a9c068f25289 344 Gene3D G3DSA:3.40.50.2300 188 317 4.3E-41 T 28-03-2018 CJD35_RS03605 0c7af0f8f923dd887b58a9c068f25289 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 28-03-2018 CJD35_RS03605 0c7af0f8f923dd887b58a9c068f25289 344 Pfam PF13377 Periplasmic binding protein-like domain 181 324 2.6E-30 T 28-03-2018 CJD35_RS22155 c2b2143b32a8f403670b24196ee90b54 187 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 183 6.0E-64 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CJD35_RS22155 c2b2143b32a8f403670b24196ee90b54 187 Gene3D G3DSA:2.60.120.10 1 184 2.4E-68 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS22155 c2b2143b32a8f403670b24196ee90b54 187 SUPERFAMILY SSF51182 1 185 1.07E-71 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS22155 c2b2143b32a8f403670b24196ee90b54 187 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 7 178 1.3E-66 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CJD35_RS22155 c2b2143b32a8f403670b24196ee90b54 187 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 5 178 3.1E-65 T 28-03-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 CJD35_RS04190 13525d8412bddc7b49509f8173845e84 75 TIGRFAM TIGR02609 doc_partner: putative addiction module antidote 5 75 3.9E-18 T 28-03-2018 IPR013432 Putative addiction module antidote CJD35_RS04190 13525d8412bddc7b49509f8173845e84 75 Gene3D G3DSA:2.10.260.10 5 46 4.1E-11 T 28-03-2018 CJD35_RS04190 13525d8412bddc7b49509f8173845e84 75 SMART SM00966 8 53 4.8E-6 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CJD35_RS04190 13525d8412bddc7b49509f8173845e84 75 SUPERFAMILY SSF89447 5 64 4.01E-11 T 28-03-2018 CJD35_RS17085 0c2bcc192b976d17a1896c296737b1e2 224 SUPERFAMILY SSF89562 24 185 1.1E-46 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CJD35_RS17085 0c2bcc192b976d17a1896c296737b1e2 224 Gene3D G3DSA:3.50.30.40 20 195 1.0E-51 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CJD35_RS17085 0c2bcc192b976d17a1896c296737b1e2 224 Pfam PF03737 Aldolase/RraA 28 174 5.8E-46 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CJD35_RS01675 7d2b74e69eafe745ec40edcb1919fed2 209 SUPERFAMILY SSF51569 13 189 2.2E-48 T 28-03-2018 CJD35_RS01675 7d2b74e69eafe745ec40edcb1919fed2 209 Gene3D G3DSA:3.20.20.70 9 209 1.7E-26 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS01675 7d2b74e69eafe745ec40edcb1919fed2 209 Pfam PF01081 KDPG and KHG aldolase 14 182 2.2E-22 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CJD35_RS01675 7d2b74e69eafe745ec40edcb1919fed2 209 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 126 139 - T 28-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CJD35_RS19830 833d6e559a8fe96f114ec30849820784 354 Gene3D G3DSA:3.40.50.1010 10 193 1.7E-8 T 28-03-2018 IPR029060 PIN domain-like CJD35_RS07475 fb81a15adad5c0a718a0add847c2e85e 377 Gene3D G3DSA:3.40.710.10 65 376 4.5E-31 T 28-03-2018 CJD35_RS07475 fb81a15adad5c0a718a0add847c2e85e 377 SUPERFAMILY SSF56601 74 222 2.04E-50 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS07475 fb81a15adad5c0a718a0add847c2e85e 377 SUPERFAMILY SSF56601 257 370 2.04E-50 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS07475 fb81a15adad5c0a718a0add847c2e85e 377 Pfam PF13354 Beta-lactamase enzyme family 99 347 5.9E-36 T 28-03-2018 CJD35_RS09970 b85773d3b5da1c60078e558a2a64de74 366 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 11 363 1.8E-89 T 28-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CJD35_RS09970 b85773d3b5da1c60078e558a2a64de74 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 13 361 6.6E-61 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CJD35_RS15670 db67a6f5d088ec47f09bb8ae1a1214c4 382 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 367 3.3E-55 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CJD35_RS15670 db67a6f5d088ec47f09bb8ae1a1214c4 382 Gene3D G3DSA:3.20.20.70 6 382 1.3E-94 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS15670 db67a6f5d088ec47f09bb8ae1a1214c4 382 SUPERFAMILY SSF51395 5 378 3.93E-89 T 28-03-2018 CJD35_RS18420 11c3d6d0284040607342ecd6f1c56eaa 302 Pfam PF13182 Protein of unknown function (DUF4007) 9 291 2.3E-80 T 28-03-2018 IPR025248 Domain of unknown function DUF4007 CJD35_RS21540 11c3d6d0284040607342ecd6f1c56eaa 302 Pfam PF13182 Protein of unknown function (DUF4007) 9 291 2.3E-80 T 28-03-2018 IPR025248 Domain of unknown function DUF4007 CJD35_RS15600 8cf05fabbebd45737372f851e6ae4f6f 184 Pfam PF03358 NADPH-dependent FMN reductase 6 143 3.4E-20 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CJD35_RS15600 8cf05fabbebd45737372f851e6ae4f6f 184 Gene3D G3DSA:3.40.50.360 1 183 1.6E-23 T 28-03-2018 IPR029039 Flavoprotein-like domain CJD35_RS15600 8cf05fabbebd45737372f851e6ae4f6f 184 SUPERFAMILY SSF52218 6 174 1.14E-29 T 28-03-2018 IPR029039 Flavoprotein-like domain CJD35_RS05300 91a143a58a2d43c9da3463321928dd4c 429 TIGRFAM TIGR02783 TrbL_P: P-type conjugative transfer protein TrbL 4 303 3.9E-64 T 28-03-2018 IPR014150 Conjugal transfer, TrbL CJD35_RS05300 91a143a58a2d43c9da3463321928dd4c 429 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 37 254 6.9E-53 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 Gene3D G3DSA:1.10.287.90 76 167 3.5E-24 T 28-03-2018 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 Gene3D G3DSA:2.60.40.420 168 337 2.9E-51 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 PRINTS PR01166 Cytochrome c oxidase subunit II signature 216 237 6.9E-49 T 28-03-2018 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 PRINTS PR01166 Cytochrome c oxidase subunit II signature 240 260 6.9E-49 T 28-03-2018 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 PRINTS PR01166 Cytochrome c oxidase subunit II signature 260 277 6.9E-49 T 28-03-2018 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 PRINTS PR01166 Cytochrome c oxidase subunit II signature 278 295 6.9E-49 T 28-03-2018 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 PRINTS PR01166 Cytochrome c oxidase subunit II signature 137 149 6.9E-49 T 28-03-2018 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 PRINTS PR01166 Cytochrome c oxidase subunit II signature 149 169 6.9E-49 T 28-03-2018 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 PRINTS PR01166 Cytochrome c oxidase subunit II signature 172 191 6.9E-49 T 28-03-2018 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 176 295 6.0E-47 T 28-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 94 305 5.2E-61 T 28-03-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 75 162 6.6E-19 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 241 289 - T 28-03-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 SUPERFAMILY SSF49503 172 306 8.01E-53 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS08275 f3fc8bf9e403079d7d6ab4fe5078fcd4 338 SUPERFAMILY SSF81464 71 164 2.62E-23 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS00525 48bc7398658e170d232e86b6d592e127 529 Gene3D G3DSA:3.40.630.10 29 511 3.3E-47 T 28-03-2018 CJD35_RS00525 48bc7398658e170d232e86b6d592e127 529 SUPERFAMILY SSF52025 122 200 1.31E-8 T 28-03-2018 CJD35_RS00525 48bc7398658e170d232e86b6d592e127 529 SUPERFAMILY SSF53187 28 72 1.42E-60 T 28-03-2018 CJD35_RS00525 48bc7398658e170d232e86b6d592e127 529 SUPERFAMILY SSF53187 271 511 1.42E-60 T 28-03-2018 CJD35_RS00525 48bc7398658e170d232e86b6d592e127 529 Pfam PF04389 Peptidase family M28 287 504 4.6E-43 T 28-03-2018 IPR007484 Peptidase M28 CJD35_RS15410 2090d928c38c2d33c83bd1e5dfa2f053 254 SUPERFAMILY SSF52799 8 251 2.75E-44 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like CJD35_RS15410 2090d928c38c2d33c83bd1e5dfa2f053 254 Gene3D G3DSA:3.90.190.10 16 181 3.1E-20 T 28-03-2018 IPR029021 Protein-tyrosine phosphatase-like CJD35_RS15410 2090d928c38c2d33c83bd1e5dfa2f053 254 Pfam PF13350 Tyrosine phosphatase family 8 251 1.1E-49 T 28-03-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type CJD35_RS15410 2090d928c38c2d33c83bd1e5dfa2f053 254 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 141 151 - T 28-03-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 CJD35_RS01350 ee7cd5bca3e5dd9e96c820e898353caf 192 SUPERFAMILY SSF48498 85 189 6.76E-6 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS01350 ee7cd5bca3e5dd9e96c820e898353caf 192 Gene3D G3DSA:1.10.10.60 1 47 2.2E-17 T 28-03-2018 CJD35_RS01350 ee7cd5bca3e5dd9e96c820e898353caf 192 Gene3D G3DSA:1.10.260.40 48 76 2.5E-5 T 28-03-2018 CJD35_RS01350 ee7cd5bca3e5dd9e96c820e898353caf 192 SUPERFAMILY SSF46689 11 90 2.1E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS01350 ee7cd5bca3e5dd9e96c820e898353caf 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 7.6E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS01350 ee7cd5bca3e5dd9e96c820e898353caf 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 7.6E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS01350 ee7cd5bca3e5dd9e96c820e898353caf 192 Gene3D G3DSA:1.10.357.10 77 192 8.7E-12 T 28-03-2018 CJD35_RS01350 ee7cd5bca3e5dd9e96c820e898353caf 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 64 1.8E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS08715 35dde49a567d871e18c9e6ef17e8e923 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 125 5.6E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS08715 35dde49a567d871e18c9e6ef17e8e923 132 Gene3D G3DSA:3.10.180.10 6 132 2.3E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS08715 35dde49a567d871e18c9e6ef17e8e923 132 SUPERFAMILY SSF54593 2 129 4.95E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS10345 c4381d9dfa401c9fe34eaa7a6f929150 337 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 17 310 6.0E-47 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CJD35_RS10345 c4381d9dfa401c9fe34eaa7a6f929150 337 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 237 254 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CJD35_RS10345 c4381d9dfa401c9fe34eaa7a6f929150 337 Gene3D G3DSA:3.20.20.300 1 314 2.5E-58 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CJD35_RS10345 c4381d9dfa401c9fe34eaa7a6f929150 337 SUPERFAMILY SSF51445 2 287 1.9E-66 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CJD35_RS08025 d2c6fe3e216d39efe1a54f44e558ebad 430 Gene3D G3DSA:3.50.50.60 22 405 5.3E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS08025 d2c6fe3e216d39efe1a54f44e558ebad 430 Pfam PF01266 FAD dependent oxidoreductase 32 387 2.9E-59 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CJD35_RS08025 d2c6fe3e216d39efe1a54f44e558ebad 430 SUPERFAMILY SSF51905 352 418 6.47E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS08025 d2c6fe3e216d39efe1a54f44e558ebad 430 SUPERFAMILY SSF51905 30 257 6.47E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS05015 be4ce5ad09b1a26f3218ce864cff59f9 650 Gene3D G3DSA:3.40.50.300 1 617 2.3E-19 T 28-03-2018 CJD35_RS05015 be4ce5ad09b1a26f3218ce864cff59f9 650 Pfam PF12532 Protein of unknown function (DUF3732) 456 634 1.9E-48 T 28-03-2018 IPR022205 Protein of unknown function DUF3732 CJD35_RS05015 be4ce5ad09b1a26f3218ce864cff59f9 650 Pfam PF13476 AAA domain 3 298 2.5E-7 T 28-03-2018 CJD35_RS05015 be4ce5ad09b1a26f3218ce864cff59f9 650 SUPERFAMILY SSF52540 191 323 2.13E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05015 be4ce5ad09b1a26f3218ce864cff59f9 650 SUPERFAMILY SSF52540 472 614 2.13E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05015 be4ce5ad09b1a26f3218ce864cff59f9 650 SUPERFAMILY SSF52540 1 78 2.13E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05015 be4ce5ad09b1a26f3218ce864cff59f9 650 SUPERFAMILY SSF52540 359 391 2.13E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS00265 bd3e530920ec58def02339eec81c602b 218 Pfam PF12697 Alpha/beta hydrolase family 7 134 8.7E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS00265 bd3e530920ec58def02339eec81c602b 218 SUPERFAMILY SSF53474 7 199 7.96E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS00265 bd3e530920ec58def02339eec81c602b 218 Gene3D G3DSA:3.40.50.1820 6 217 8.6E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS14975 3c0a8fbb00ba4dd7e4ae861c3d335bca 190 Gene3D G3DSA:1.20.950.20 3 190 1.5E-28 T 28-03-2018 CJD35_RS14975 3c0a8fbb00ba4dd7e4ae861c3d335bca 190 SUPERFAMILY SSF81342 5 190 1.02E-28 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CJD35_RS14975 3c0a8fbb00ba4dd7e4ae861c3d335bca 190 Pfam PF01292 Prokaryotic cytochrome b561 11 178 1.4E-22 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CJD35_RS03865 9d6916132f41342a1477ac5027d009b5 298 SUPERFAMILY SSF53448 6 277 7.43E-60 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS03865 9d6916132f41342a1477ac5027d009b5 298 Gene3D G3DSA:3.90.550.10 1 292 1.7E-53 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS03865 9d6916132f41342a1477ac5027d009b5 298 Pfam PF00483 Nucleotidyl transferase 12 270 2.6E-22 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CJD35_RS14045 7edca2eee77ba7eef5598b3986a33ce1 88 SUPERFAMILY SSF109910 3 80 5.1E-20 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase CJD35_RS14045 7edca2eee77ba7eef5598b3986a33ce1 88 Gene3D G3DSA:1.10.150.250 1 84 8.1E-21 T 28-03-2018 CJD35_RS14045 7edca2eee77ba7eef5598b3986a33ce1 88 Pfam PF03937 Flavinator of succinate dehydrogenase 8 77 6.0E-21 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase CJD35_RS11565 f76d987b7c814cef3be8a77d5e5db5e2 108 Pfam PF08797 HIRAN domain 3 53 9.5E-9 T 28-03-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 CJD35_RS13685 7d9832faf6339b466034ded4df82bb49 492 Pfam PF11134 Phage stabilisation protein 30 471 3.4E-37 T 28-03-2018 IPR021098 Bacteriophage P22, Gp10, DNA-stabilising CJD35_RS04945 db8141d1e78749e41108ef751143f89d 235 Pfam PF04402 Protein of unknown function (DUF541) 42 231 2.0E-17 T 28-03-2018 IPR007497 Protein of unknown function DUF541 CJD35_RS04945 db8141d1e78749e41108ef751143f89d 235 PIRSF PIRSF029033 3 235 1.7E-46 T 28-03-2018 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein CJD35_RS21675 acabe143d8750bc0ebc0bbc966a76b66 109 Pfam PF12599 Protein of unknown function (DUF3768) 29 104 3.8E-16 T 28-03-2018 IPR022243 Protein of unknown function DUF3768 CJD35_RS16090 818a6137ef7018f52836cfbbba9229c0 692 Gene3D G3DSA:3.40.50.300 32 292 2.8E-4 T 28-03-2018 CJD35_RS16090 818a6137ef7018f52836cfbbba9229c0 692 Pfam PF13871 C-terminal domain on Strawberry notch homologue 150 405 7.3E-86 T 28-03-2018 IPR026937 Strawberry notch, helicase C domain CJD35_RS07800 9d300226bacd70470d2a0a5e91d9e56d 282 SUPERFAMILY SSF54675 3 114 2.28E-28 T 28-03-2018 CJD35_RS07800 9d300226bacd70470d2a0a5e91d9e56d 282 PIRSF PIRSF006250 7 281 4.7E-81 T 28-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CJD35_RS07800 9d300226bacd70470d2a0a5e91d9e56d 282 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 279 7.3E-84 T 28-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CJD35_RS07800 9d300226bacd70470d2a0a5e91d9e56d 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 115 278 3.6E-51 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CJD35_RS07800 9d300226bacd70470d2a0a5e91d9e56d 282 SUPERFAMILY SSF51690 115 279 1.53E-52 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CJD35_RS07800 9d300226bacd70470d2a0a5e91d9e56d 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 27 113 4.0E-22 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CJD35_RS07800 9d300226bacd70470d2a0a5e91d9e56d 282 Gene3D G3DSA:3.90.1170.20 1 140 5.2E-42 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CJD35_RS07800 9d300226bacd70470d2a0a5e91d9e56d 282 Gene3D G3DSA:3.20.20.70 141 269 1.4E-38 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS14020 2e8e49035de16e517688c439ac34ac4e 361 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 361 36.659 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CJD35_RS14020 2e8e49035de16e517688c439ac34ac4e 361 SUPERFAMILY SSF53067 144 335 1.17E-14 T 28-03-2018 CJD35_RS14020 2e8e49035de16e517688c439ac34ac4e 361 SUPERFAMILY SSF53067 69 114 1.17E-14 T 28-03-2018 CJD35_RS14020 2e8e49035de16e517688c439ac34ac4e 361 SUPERFAMILY SSF53067 1 33 1.17E-14 T 28-03-2018 CJD35_RS14020 2e8e49035de16e517688c439ac34ac4e 361 Gene3D G3DSA:3.30.420.40 243 361 1.3E-20 T 28-03-2018 CJD35_RS14020 2e8e49035de16e517688c439ac34ac4e 361 Gene3D G3DSA:3.30.420.40 1 185 2.6E-50 T 28-03-2018 CJD35_RS14020 2e8e49035de16e517688c439ac34ac4e 361 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 2 359 6.7E-89 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CJD35_RS18805 329bc4eb6f462b0055eb29d7b9d073ce 428 Gene3D G3DSA:3.30.565.10 256 424 1.9E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS18805 329bc4eb6f462b0055eb29d7b9d073ce 428 Pfam PF13185 GAF domain 73 207 6.5E-14 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS18805 329bc4eb6f462b0055eb29d7b9d073ce 428 Gene3D G3DSA:3.30.450.40 57 215 3.7E-16 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS18805 329bc4eb6f462b0055eb29d7b9d073ce 428 SMART SM00911 230 322 1.3E-18 T 28-03-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 CJD35_RS18805 329bc4eb6f462b0055eb29d7b9d073ce 428 SUPERFAMILY SSF55781 73 225 1.1E-14 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS18805 329bc4eb6f462b0055eb29d7b9d073ce 428 Pfam PF07536 HWE histidine kinase 230 321 8.8E-17 T 28-03-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 CJD35_RS00950 0c2b63f02dc76e3e2b97123c1576a96b 162 Gene3D G3DSA:3.40.50.7700 2 162 1.3E-66 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CJD35_RS00950 0c2b63f02dc76e3e2b97123c1576a96b 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 7 160 32.953 T 28-03-2018 IPR033747 Class I PurE CJD35_RS00950 0c2b63f02dc76e3e2b97123c1576a96b 162 Pfam PF00731 AIR carboxylase 6 154 1.8E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CJD35_RS00950 0c2b63f02dc76e3e2b97123c1576a96b 162 SMART SM01001 5 156 8.3E-105 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CJD35_RS00950 0c2b63f02dc76e3e2b97123c1576a96b 162 SUPERFAMILY SSF52255 6 159 1.14E-66 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CJD35_RS00950 0c2b63f02dc76e3e2b97123c1576a96b 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 7 159 1.2E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CJD35_RS00950 0c2b63f02dc76e3e2b97123c1576a96b 162 PIRSF PIRSF001338 2 162 2.8E-68 T 28-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CJD35_RS09420 4bed57412fde90abf6f9e5ba5e6441c1 388 Pfam PF00155 Aminotransferase class I and II 63 382 4.2E-27 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJD35_RS09420 4bed57412fde90abf6f9e5ba5e6441c1 388 Gene3D G3DSA:3.40.640.10 70 286 7.2E-27 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS09420 4bed57412fde90abf6f9e5ba5e6441c1 388 SUPERFAMILY SSF53383 46 386 3.09E-55 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS09420 4bed57412fde90abf6f9e5ba5e6441c1 388 Gene3D G3DSA:3.90.1150.10 287 381 1.5E-7 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS19200 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 Gene3D G3DSA:1.10.150.130 117 227 5.6E-9 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS19200 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 Gene3D G3DSA:1.10.443.10 328 507 4.7E-33 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19200 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 Gene3D G3DSA:1.10.150.130 21 116 1.0E-6 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS19200 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 Gene3D G3DSA:1.10.150.130 228 321 1.1E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS19200 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 SUPERFAMILY SSF56349 230 506 4.71E-35 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS19200 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 Pfam PF00589 Phage integrase family 330 498 1.0E-26 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20405 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 Gene3D G3DSA:1.10.150.130 117 227 5.6E-9 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20405 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 Gene3D G3DSA:1.10.443.10 328 507 4.7E-33 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS20405 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 Gene3D G3DSA:1.10.150.130 21 116 1.0E-6 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20405 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 Gene3D G3DSA:1.10.150.130 228 321 1.1E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20405 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 SUPERFAMILY SSF56349 230 506 4.71E-35 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS20405 416de0a1d7a2c0a1be11ea2fb9b2aa4e 515 Pfam PF00589 Phage integrase family 330 498 1.0E-26 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS03370 114a57e0dc84cd3eb25375cb32a72487 154 Gene3D G3DSA:1.20.120.520 3 145 4.7E-23 T 28-03-2018 CJD35_RS03370 114a57e0dc84cd3eb25375cb32a72487 154 Pfam PF01814 Hemerythrin HHE cation binding domain 6 121 9.2E-17 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CJD35_RS11235 15eac60563d0be24cb0e52592f48bd00 301 SUPERFAMILY SSF51735 7 299 5.0E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS11235 15eac60563d0be24cb0e52592f48bd00 301 Gene3D G3DSA:3.40.50.720 5 178 2.7E-19 T 28-03-2018 CJD35_RS11235 15eac60563d0be24cb0e52592f48bd00 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 219 2.1E-31 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CJD35_RS11235 15eac60563d0be24cb0e52592f48bd00 301 Gene3D G3DSA:3.90.25.10 179 301 3.3E-21 T 28-03-2018 CJD35_RS01575 605900fbe08d046535c17c536713b0d3 237 Gene3D G3DSA:1.10.150.240 49 96 7.3E-18 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CJD35_RS01575 605900fbe08d046535c17c536713b0d3 237 Gene3D G3DSA:3.40.50.1000 10 48 0.13 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS01575 605900fbe08d046535c17c536713b0d3 237 SUPERFAMILY SSF56784 21 234 2.58E-56 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS01575 605900fbe08d046535c17c536713b0d3 237 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 24 232 1.7E-54 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CJD35_RS01575 605900fbe08d046535c17c536713b0d3 237 Gene3D G3DSA:3.40.50.1000 97 237 6.8E-33 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS01575 605900fbe08d046535c17c536713b0d3 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 26 204 7.1E-32 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS01575 605900fbe08d046535c17c536713b0d3 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 120 198 2.7E-11 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CJD35_RS01575 605900fbe08d046535c17c536713b0d3 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 204 6.2E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CJD35_RS07775 039d972b1b4593eb6257f0ac2c50e4c7 324 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 129 301 4.0E-64 T 28-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CJD35_RS07775 039d972b1b4593eb6257f0ac2c50e4c7 324 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 7 125 1.0E-40 T 28-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CJD35_RS07775 039d972b1b4593eb6257f0ac2c50e4c7 324 Gene3D G3DSA:3.30.470.20 197 304 4.4E-17 T 28-03-2018 CJD35_RS07775 039d972b1b4593eb6257f0ac2c50e4c7 324 Hamap MF_00162 Glutathione synthetase [gshB]. 1 321 146.456 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CJD35_RS07775 039d972b1b4593eb6257f0ac2c50e4c7 324 TIGRFAM TIGR01380 glut_syn: glutathione synthase 7 316 1.3E-118 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CJD35_RS07775 039d972b1b4593eb6257f0ac2c50e4c7 324 Gene3D G3DSA:3.40.50.20 7 134 2.7E-45 T 28-03-2018 CJD35_RS07775 039d972b1b4593eb6257f0ac2c50e4c7 324 SUPERFAMILY SSF56059 129 315 2.6E-53 T 28-03-2018 CJD35_RS07775 039d972b1b4593eb6257f0ac2c50e4c7 324 SUPERFAMILY SSF52440 7 127 1.58E-39 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CJD35_RS07775 039d972b1b4593eb6257f0ac2c50e4c7 324 Gene3D G3DSA:3.30.1490.20 143 196 4.2E-18 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CJD35_RS03280 2943bc5666ee1e89ca1fb8e4f304d6ad 68 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 13 40 6.0E-9 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03280 2943bc5666ee1e89ca1fb8e4f304d6ad 68 Pfam PF01165 Ribosomal protein S21 2 55 1.1E-19 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03280 2943bc5666ee1e89ca1fb8e4f304d6ad 68 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 1 57 1.7E-21 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03280 2943bc5666ee1e89ca1fb8e4f304d6ad 68 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 55 14.175 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03280 2943bc5666ee1e89ca1fb8e4f304d6ad 68 Gene3D G3DSA:1.20.5.1150 14 50 3.1E-15 T 28-03-2018 CJD35_RS03280 2943bc5666ee1e89ca1fb8e4f304d6ad 68 PRINTS PR00976 Ribosomal protein S21 family signature 35 45 3.3E-5 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03280 2943bc5666ee1e89ca1fb8e4f304d6ad 68 PRINTS PR00976 Ribosomal protein S21 family signature 11 20 3.3E-5 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03280 2943bc5666ee1e89ca1fb8e4f304d6ad 68 PRINTS PR00976 Ribosomal protein S21 family signature 23 33 3.3E-5 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03280 2943bc5666ee1e89ca1fb8e4f304d6ad 68 ProSitePatterns PS01181 Ribosomal protein S21 signature. 11 23 - T 28-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS17625 82c66d3df57ed69753ff3aa5c0c8beeb 209 SUPERFAMILY SSF48498 95 207 3.18E-17 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CJD35_RS17625 82c66d3df57ed69753ff3aa5c0c8beeb 209 Gene3D G3DSA:1.10.357.10 72 209 8.0E-23 T 28-03-2018 CJD35_RS17625 82c66d3df57ed69753ff3aa5c0c8beeb 209 Gene3D G3DSA:1.10.10.60 2 71 1.4E-21 T 28-03-2018 CJD35_RS17625 82c66d3df57ed69753ff3aa5c0c8beeb 209 SUPERFAMILY SSF46689 17 99 6.8E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS17625 82c66d3df57ed69753ff3aa5c0c8beeb 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 74 9.0E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS17625 82c66d3df57ed69753ff3aa5c0c8beeb 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 2.9E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS17625 82c66d3df57ed69753ff3aa5c0c8beeb 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 2.9E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CJD35_RS05330 9a39c523d005bd058ef4c9545727fe52 280 Pfam PF00581 Rhodanese-like domain 9 99 3.2E-6 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS05330 9a39c523d005bd058ef4c9545727fe52 280 Pfam PF09828 Chromate resistance exported protein 122 258 1.5E-46 T 28-03-2018 IPR018634 Chromate resistance exported protein CJD35_RS05330 9a39c523d005bd058ef4c9545727fe52 280 SUPERFAMILY SSF52821 1 155 1.22E-21 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS05330 9a39c523d005bd058ef4c9545727fe52 280 Gene3D G3DSA:3.40.250.10 2 110 1.9E-14 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS05330 9a39c523d005bd058ef4c9545727fe52 280 SMART SM00450 8 104 2.2E-6 T 28-03-2018 IPR001763 Rhodanese-like domain CJD35_RS08295 e8fc32f95a9bef917f12bcd5f7d56764 276 Gene3D G3DSA:1.10.287.70 1 75 1.9E-24 T 28-03-2018 CJD35_RS08295 e8fc32f95a9bef917f12bcd5f7d56764 276 Gene3D G3DSA:1.20.120.80 76 268 5.9E-77 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08295 e8fc32f95a9bef917f12bcd5f7d56764 276 Pfam PF00510 Cytochrome c oxidase subunit III 7 267 1.1E-87 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS08295 e8fc32f95a9bef917f12bcd5f7d56764 276 SUPERFAMILY SSF81452 5 267 6.54E-94 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS15310 c5eb233b483739e5b824abbe4d4dfb46 280 SUPERFAMILY SSF48179 163 271 3.4E-11 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CJD35_RS15310 c5eb233b483739e5b824abbe4d4dfb46 280 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 272 2.5E-8 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CJD35_RS15310 c5eb233b483739e5b824abbe4d4dfb46 280 Gene3D G3DSA:1.10.1040.10 173 275 1.3E-7 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CJD35_RS15310 c5eb233b483739e5b824abbe4d4dfb46 280 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 7 162 1.4E-29 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CJD35_RS15310 c5eb233b483739e5b824abbe4d4dfb46 280 Gene3D G3DSA:3.40.50.720 1 172 4.2E-26 T 28-03-2018 CJD35_RS15310 c5eb233b483739e5b824abbe4d4dfb46 280 SUPERFAMILY SSF51735 7 163 7.29E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15310 c5eb233b483739e5b824abbe4d4dfb46 280 PIRSF PIRSF000103 1 275 1.7E-44 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CJD35_RS11975 3bac66f596c99778c0361fb4cc4bf6ef 98 Pfam PF11011 Protein of unknown function (DUF2849) 2 83 9.3E-26 T 28-03-2018 IPR021270 Protein of unknown function DUF2849 CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 4.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 4.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 4.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.5E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 248 9.5E-48 T 28-03-2018 CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 Gene3D G3DSA:3.40.50.720 39 251 6.2E-53 T 28-03-2018 CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 Gene3D G3DSA:3.40.50.720 1 38 5.3E-6 T 28-03-2018 CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 SUPERFAMILY SSF51735 3 249 9.06E-68 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 187 1.3E-4 T 28-03-2018 CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 6.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 6.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12400 702f530bb9eb92be6aa906778a7983c0 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 6.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS05150 0c2d9beb1efb3fa8674085b222a243be 355 PIRSF PIRSF037112 28 342 2.0E-106 T 28-03-2018 IPR017113 Antirestriction, ArdC CJD35_RS05150 0c2d9beb1efb3fa8674085b222a243be 355 Pfam PF08401 Domain of unknown function (DUF1738) 43 168 2.9E-36 T 28-03-2018 IPR013610 Domain of unknown function DUF1738 CJD35_RS06215 4f3b73d002fcf8db50f9457e177557a7 211 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 82 90 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CJD35_RS06215 4f3b73d002fcf8db50f9457e177557a7 211 Gene3D G3DSA:1.10.150.120 118 211 1.9E-34 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS06215 4f3b73d002fcf8db50f9457e177557a7 211 SUPERFAMILY SSF47741 127 208 4.06E-26 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS06215 4f3b73d002fcf8db50f9457e177557a7 211 SUPERFAMILY SSF54292 45 130 1.7E-27 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS06215 4f3b73d002fcf8db50f9457e177557a7 211 Gene3D G3DSA:3.10.20.30 43 117 2.1E-29 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS06215 4f3b73d002fcf8db50f9457e177557a7 211 Pfam PF01799 [2Fe-2S] binding domain 116 202 3.9E-28 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CJD35_RS06215 4f3b73d002fcf8db50f9457e177557a7 211 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 49 98 2.4E-10 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 949 0.0 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 Gene3D G3DSA:3.40.50.300 643 971 2.7E-57 T 28-03-2018 CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 964 22.357 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 Gene3D G3DSA:1.10.8.280 307 429 8.1E-36 T 28-03-2018 CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 SUPERFAMILY SSF52540 641 937 5.46E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 Gene3D G3DSA:3.40.50.300 453 642 6.6E-23 T 28-03-2018 CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 Gene3D G3DSA:3.40.50.300 12 37 0.067 T 28-03-2018 CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 Pfam PF00005 ABC transporter 832 884 5.6E-5 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 ProSitePatterns PS00211 ABC transporters family signature. 854 868 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 SUPERFAMILY SSF52540 5 206 9.16E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 SUPERFAMILY SSF52540 465 595 9.16E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 ProSitePatterns PS00211 ABC transporters family signature. 513 527 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 Gene3D G3DSA:3.30.190.20 129 243 4.2E-40 T 28-03-2018 CJD35_RS10800 d9329b5d6c41231e1778eeab6bf47e64 973 Gene3D G3DSA:3.40.50.300 38 118 8.8E-5 T 28-03-2018 CJD35_RS07125 db5e795063e0e896ccd667e7d0fbb004 376 Gene3D G3DSA:3.30.930.10 20 305 2.9E-27 T 28-03-2018 CJD35_RS07125 db5e795063e0e896ccd667e7d0fbb004 376 PIRSF PIRSF001549 7 329 2.2E-29 T 28-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CJD35_RS07125 db5e795063e0e896ccd667e7d0fbb004 376 Pfam PF13393 Histidyl-tRNA synthetase 12 315 4.3E-82 T 28-03-2018 CJD35_RS07125 db5e795063e0e896ccd667e7d0fbb004 376 SUPERFAMILY SSF55681 9 318 1.9E-39 T 28-03-2018 CJD35_RS21385 3a3ebe5ca3f952136c6eff38256b1f9c 177 Pfam PF06078 Bacterial protein of unknown function (DUF937) 12 131 1.1E-13 T 28-03-2018 IPR009282 Protein of unknown function DUF937 CJD35_RS18265 3a3ebe5ca3f952136c6eff38256b1f9c 177 Pfam PF06078 Bacterial protein of unknown function (DUF937) 12 131 1.1E-13 T 28-03-2018 IPR009282 Protein of unknown function DUF937 CJD35_RS02905 7f7ceacb00e1ac8da0ff6568949c0226 263 PIRSF PIRSF028756 4 254 1.8E-66 T 28-03-2018 IPR016898 Polyphosphate kinase 2 CJD35_RS02905 7f7ceacb00e1ac8da0ff6568949c0226 263 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 17 233 7.8E-72 T 28-03-2018 IPR022488 Polyphosphate kinase-2-related CJD35_RS02905 7f7ceacb00e1ac8da0ff6568949c0226 263 Gene3D G3DSA:3.40.50.300 6 253 3.5E-75 T 28-03-2018 CJD35_RS02905 7f7ceacb00e1ac8da0ff6568949c0226 263 SUPERFAMILY SSF52540 44 219 2.03E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS11850 2847b14edb98c326f74bd66c6552c5c0 327 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 4 325 1.0E-97 T 28-03-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 CJD35_RS11850 2847b14edb98c326f74bd66c6552c5c0 327 SUPERFAMILY SSF55909 1 326 1.55E-105 T 28-03-2018 CJD35_RS11850 2847b14edb98c326f74bd66c6552c5c0 327 Gene3D G3DSA:3.75.10.10 1 327 8.8E-107 T 28-03-2018 CJD35_RS20885 bc979963a344d70cce2c1e605456667b 237 SUPERFAMILY SSF101082 24 210 2.88E-34 T 28-03-2018 IPR023220 Type IV secretion system, VirB5-domain CJD35_RS20885 bc979963a344d70cce2c1e605456667b 237 Gene3D G3DSA:1.20.58.430 24 220 4.2E-30 T 28-03-2018 CJD35_RS20885 bc979963a344d70cce2c1e605456667b 237 Pfam PF07996 Type IV secretion system proteins 24 211 9.7E-35 T 28-03-2018 IPR014158 Type IV secretion system, VirB5 CJD35_RS10450 13c2760fd07ba08460d399abc174a94e 475 Pfam PF01225 Mur ligase family, catalytic domain 10 107 2.9E-28 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CJD35_RS10450 13c2760fd07ba08460d399abc174a94e 475 SUPERFAMILY SSF53244 317 464 1.15E-45 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CJD35_RS10450 13c2760fd07ba08460d399abc174a94e 475 Gene3D G3DSA:3.90.190.20 319 469 2.5E-36 T 28-03-2018 CJD35_RS10450 13c2760fd07ba08460d399abc174a94e 475 SUPERFAMILY SSF51984 10 95 4.05E-27 T 28-03-2018 CJD35_RS10450 13c2760fd07ba08460d399abc174a94e 475 Pfam PF02875 Mur ligase family, glutamate ligase domain 318 407 4.5E-17 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CJD35_RS10450 13c2760fd07ba08460d399abc174a94e 475 SUPERFAMILY SSF53623 94 316 5.76E-70 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS10450 13c2760fd07ba08460d399abc174a94e 475 Pfam PF08245 Mur ligase middle domain 113 298 2.3E-31 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS10450 13c2760fd07ba08460d399abc174a94e 475 Gene3D G3DSA:3.40.50.720 11 96 5.8E-15 T 28-03-2018 CJD35_RS10450 13c2760fd07ba08460d399abc174a94e 475 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 8 469 41.304 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS10450 13c2760fd07ba08460d399abc174a94e 475 Gene3D G3DSA:3.40.1190.10 97 318 5.4E-52 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CJD35_RS10450 13c2760fd07ba08460d399abc174a94e 475 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 11 463 5.8E-157 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CJD35_RS03670 23856ddf78be0c53c23ae760bf47a047 339 Pfam PF01212 Beta-eliminating lyase 3 290 7.5E-52 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CJD35_RS03670 23856ddf78be0c53c23ae760bf47a047 339 Gene3D G3DSA:3.90.1150.10 249 337 4.9E-13 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS03670 23856ddf78be0c53c23ae760bf47a047 339 SUPERFAMILY SSF53383 1 333 4.9E-83 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS03670 23856ddf78be0c53c23ae760bf47a047 339 Gene3D G3DSA:3.40.640.10 12 248 4.2E-23 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS15130 477da00d074f4255ecff7de3a20f0ed6 621 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 157 5.8E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15130 477da00d074f4255ecff7de3a20f0ed6 621 Gene3D G3DSA:2.40.170.20 170 620 5.8E-42 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15130 477da00d074f4255ecff7de3a20f0ed6 621 Pfam PF00593 TonB dependent receptor 282 587 8.9E-31 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15130 477da00d074f4255ecff7de3a20f0ed6 621 SUPERFAMILY SSF56935 257 618 5.49E-81 T 28-03-2018 CJD35_RS15130 477da00d074f4255ecff7de3a20f0ed6 621 SUPERFAMILY SSF56935 42 225 5.49E-81 T 28-03-2018 CJD35_RS15130 477da00d074f4255ecff7de3a20f0ed6 621 Gene3D G3DSA:2.170.130.10 31 164 4.6E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS02660 4e633881f0b4baa288a6aab730e3d93b 614 SUPERFAMILY SSF56317 377 588 3.66E-16 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS02660 4e633881f0b4baa288a6aab730e3d93b 614 Gene3D G3DSA:3.60.110.10 312 600 2.4E-13 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS02660 4e633881f0b4baa288a6aab730e3d93b 614 Gene3D G3DSA:3.60.110.10 84 271 1.5E-8 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS02660 4e633881f0b4baa288a6aab730e3d93b 614 SUPERFAMILY SSF56317 109 266 7.59E-7 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS19420 86897462c3ec2ba5bf12fa736db75619 396 SUPERFAMILY SSF51735 3 149 2.28E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS19420 86897462c3ec2ba5bf12fa736db75619 396 SUPERFAMILY SSF55347 125 237 4.58E-17 T 28-03-2018 CJD35_RS19420 86897462c3ec2ba5bf12fa736db75619 396 Gene3D G3DSA:3.30.360.10 143 382 3.3E-33 T 28-03-2018 CJD35_RS19420 86897462c3ec2ba5bf12fa736db75619 396 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 4.4E-25 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CJD35_RS19420 86897462c3ec2ba5bf12fa736db75619 396 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 213 8.7E-6 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CJD35_RS19420 86897462c3ec2ba5bf12fa736db75619 396 Gene3D G3DSA:3.40.50.720 1 142 8.4E-42 T 28-03-2018 CJD35_RS09770 e3716f21dc11ece60daf189c749a5f4c 506 SUPERFAMILY SSF48452 322 460 1.38E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS09770 e3716f21dc11ece60daf189c749a5f4c 506 Gene3D G3DSA:1.25.40.10 39 505 5.6E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS18815 765d041b8f3ceffd4a7a079ad8b6f88a 225 SUPERFAMILY SSF50494 7 222 7.98E-62 T 28-03-2018 IPR009003 Peptidase S1, PA clan CJD35_RS18815 765d041b8f3ceffd4a7a079ad8b6f88a 225 Pfam PF13365 Trypsin-like peptidase domain 59 193 2.9E-31 T 28-03-2018 CJD35_RS18815 765d041b8f3ceffd4a7a079ad8b6f88a 225 PRINTS PR00834 HtrA/DegQ protease family signature 130 154 1.2E-41 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS18815 765d041b8f3ceffd4a7a079ad8b6f88a 225 PRINTS PR00834 HtrA/DegQ protease family signature 90 110 1.2E-41 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS18815 765d041b8f3ceffd4a7a079ad8b6f88a 225 PRINTS PR00834 HtrA/DegQ protease family signature 69 81 1.2E-41 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS18815 765d041b8f3ceffd4a7a079ad8b6f88a 225 PRINTS PR00834 HtrA/DegQ protease family signature 164 181 1.2E-41 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS18815 765d041b8f3ceffd4a7a079ad8b6f88a 225 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 1.2E-41 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CJD35_RS18815 765d041b8f3ceffd4a7a079ad8b6f88a 225 Gene3D G3DSA:2.40.10.10 3 125 1.1E-30 T 28-03-2018 CJD35_RS18815 765d041b8f3ceffd4a7a079ad8b6f88a 225 Gene3D G3DSA:2.40.10.10 126 225 5.0E-36 T 28-03-2018 CJD35_RS05180 8c05e12ae7440f6ad53da0441db6e6df 78 SUPERFAMILY SSF46955 21 71 2.38E-7 T 28-03-2018 IPR009061 Putative DNA-binding domain CJD35_RS05180 8c05e12ae7440f6ad53da0441db6e6df 78 Gene3D G3DSA:1.10.10.10 21 77 1.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05180 8c05e12ae7440f6ad53da0441db6e6df 78 Pfam PF12728 Helix-turn-helix domain 21 70 9.9E-10 T 28-03-2018 CJD35_RS20920 9867b773dc5aeab666e7025f87f1fb6c 82 Gene3D G3DSA:1.10.1220.10 3 69 6.9E-5 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS12060 53f9870d8cb175d376d4c73c987578d9 100 Pfam PF11950 Protein of unknown function (DUF3467) 3 99 5.5E-16 T 28-03-2018 IPR021857 Protein of unknown function DUF3467 CJD35_RS20665 69e563f6ce72fca44be09c17bac77399 186 Pfam PF02796 Helix-turn-helix domain of resolvase 139 178 1.0E-8 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20665 69e563f6ce72fca44be09c17bac77399 186 Gene3D G3DSA:1.20.5.40 106 135 1.2E-12 T 28-03-2018 CJD35_RS20665 69e563f6ce72fca44be09c17bac77399 186 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CJD35_RS20665 69e563f6ce72fca44be09c17bac77399 186 Gene3D G3DSA:1.10.10.60 137 183 1.1E-9 T 28-03-2018 CJD35_RS20665 69e563f6ce72fca44be09c17bac77399 186 SUPERFAMILY SSF46689 139 181 1.57E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CJD35_RS20665 69e563f6ce72fca44be09c17bac77399 186 SMART SM00857 2 137 1.6E-46 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20665 69e563f6ce72fca44be09c17bac77399 186 SUPERFAMILY SSF53041 1 136 1.83E-38 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20665 69e563f6ce72fca44be09c17bac77399 186 Pfam PF00239 Resolvase, N terminal domain 3 136 1.9E-37 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CJD35_RS20665 69e563f6ce72fca44be09c17bac77399 186 Gene3D G3DSA:3.40.50.1390 1 105 1.7E-28 T 28-03-2018 CJD35_RS08725 67ed5b8360ad49cebd5990172cfc5162 184 Gene3D G3DSA:2.40.50.90 80 177 4.5E-4 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain CJD35_RS08725 67ed5b8360ad49cebd5990172cfc5162 184 SUPERFAMILY SSF50199 84 172 4.97E-5 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS09305 ee9d944da76f40a76861330fa9eee91e 148 SUPERFAMILY SSF53795 9 119 4.58E-22 T 28-03-2018 CJD35_RS09305 ee9d944da76f40a76861330fa9eee91e 148 Gene3D G3DSA:3.40.50.300 6 144 8.7E-25 T 28-03-2018 CJD35_RS09305 ee9d944da76f40a76861330fa9eee91e 148 Pfam PF07475 HPr Serine kinase C-terminal domain 7 86 1.5E-19 T 28-03-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 CJD35_RS17180 03e5ef5d84756fec4e734bdd8ced9f8a 482 Gene3D G3DSA:1.20.1600.10 23 471 1.3E-49 T 28-03-2018 CJD35_RS17180 03e5ef5d84756fec4e734bdd8ced9f8a 482 Pfam PF02321 Outer membrane efflux protein 291 469 1.2E-17 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS17180 03e5ef5d84756fec4e734bdd8ced9f8a 482 Pfam PF02321 Outer membrane efflux protein 40 257 4.3E-5 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS17180 03e5ef5d84756fec4e734bdd8ced9f8a 482 SUPERFAMILY SSF56954 3 109 1.7E-42 T 28-03-2018 CJD35_RS17180 03e5ef5d84756fec4e734bdd8ced9f8a 482 SUPERFAMILY SSF56954 154 469 1.7E-42 T 28-03-2018 CJD35_RS22150 7cfed40b35e88cd2c4e73b7c05317976 379 Gene3D G3DSA:3.10.560.10 164 246 6.9E-11 T 28-03-2018 CJD35_RS22150 7cfed40b35e88cd2c4e73b7c05317976 379 Gene3D G3DSA:3.10.560.10 247 343 5.1E-13 T 28-03-2018 CJD35_RS22150 7cfed40b35e88cd2c4e73b7c05317976 379 Gene3D G3DSA:3.30.1950.10 82 163 1.3E-15 T 28-03-2018 CJD35_RS22150 7cfed40b35e88cd2c4e73b7c05317976 379 Pfam PF02563 Polysaccharide biosynthesis/export protein 77 168 3.6E-17 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CJD35_RS00535 d36e51fe32accf1b4467c76689b221fe 240 Pfam PF10988 Putative auto-transporter adhesin, head GIN domain 39 220 2.3E-30 T 28-03-2018 IPR021255 Putative auto-transporter adhesin, head GIN domain CJD35_RS03495 fe1935ed71485084dac1772a5402aafa 203 Pfam PF05433 Glycine zipper 2TM domain 156 195 1.5E-8 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CJD35_RS21630 33b2edb34f38c970ff09e6722659cd66 66 Pfam PF12836 Helix-hairpin-helix motif 5 50 4.0E-12 T 28-03-2018 CJD35_RS21630 33b2edb34f38c970ff09e6722659cd66 66 SUPERFAMILY SSF47781 4 52 2.67E-13 T 28-03-2018 IPR010994 RuvA domain 2-like CJD35_RS21630 33b2edb34f38c970ff09e6722659cd66 66 Gene3D G3DSA:1.10.150.310 7 58 8.0E-9 T 28-03-2018 CJD35_RS01655 88090539a69702f9080c3e6512aee0ad 186 Gene3D G3DSA:3.30.230.10 55 186 1.4E-52 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CJD35_RS01655 88090539a69702f9080c3e6512aee0ad 186 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 57 186 32.387 T 28-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CJD35_RS01655 88090539a69702f9080c3e6512aee0ad 186 Pfam PF00380 Ribosomal protein S9/S16 66 186 7.4E-47 T 28-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CJD35_RS01655 88090539a69702f9080c3e6512aee0ad 186 SUPERFAMILY SSF54211 61 186 8.34E-47 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CJD35_RS07290 3f70f3dfd76ec05fd42ca0da58fd1bac 193 Pfam PF03641 Possible lysine decarboxylase 46 176 5.6E-39 T 28-03-2018 IPR031100 LOG family CJD35_RS07290 3f70f3dfd76ec05fd42ca0da58fd1bac 193 Gene3D G3DSA:3.40.50.450 1 192 1.5E-61 T 28-03-2018 CJD35_RS07290 3f70f3dfd76ec05fd42ca0da58fd1bac 193 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 4 179 1.5E-56 T 28-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CJD35_RS07290 3f70f3dfd76ec05fd42ca0da58fd1bac 193 SUPERFAMILY SSF102405 2 179 1.25E-59 T 28-03-2018 CJD35_RS15095 3b898de910bc3df46a7bb008f4c9b7a0 498 Pfam PF07690 Major Facilitator Superfamily 24 458 1.2E-18 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS15095 3b898de910bc3df46a7bb008f4c9b7a0 498 SUPERFAMILY SSF103473 20 225 1.83E-31 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS15095 3b898de910bc3df46a7bb008f4c9b7a0 498 SUPERFAMILY SSF103473 293 496 1.83E-31 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS15095 3b898de910bc3df46a7bb008f4c9b7a0 498 Gene3D G3DSA:1.20.1250.20 302 498 1.8E-18 T 28-03-2018 CJD35_RS15095 3b898de910bc3df46a7bb008f4c9b7a0 498 Gene3D G3DSA:1.20.1250.20 18 223 1.8E-18 T 28-03-2018 CJD35_RS09480 3d885b803d6f35de7bb6eb2b2d573d32 346 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 20 337 2.8E-115 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CJD35_RS09480 3d885b803d6f35de7bb6eb2b2d573d32 346 Gene3D G3DSA:3.40.718.10 13 343 7.3E-116 T 28-03-2018 CJD35_RS09480 3d885b803d6f35de7bb6eb2b2d573d32 346 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 77 334 8.3E-96 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CJD35_RS09480 3d885b803d6f35de7bb6eb2b2d573d32 346 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 16 338 33.32 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CJD35_RS09480 3d885b803d6f35de7bb6eb2b2d573d32 346 SUPERFAMILY SSF53659 19 339 2.06E-100 T 28-03-2018 CJD35_RS22225 5525a4747c25e23cfda791ab2de80da2 310 Pfam PF01609 Transposase DDE domain 91 297 1.6E-14 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CJD35_RS22225 5525a4747c25e23cfda791ab2de80da2 310 Pfam PF05598 Transposase domain (DUF772) 3 76 8.4E-25 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CJD35_RS20890 6c4b6947c01f87d6fbd53196b84c01a9 794 SUPERFAMILY SSF52540 389 712 1.11E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20890 6c4b6947c01f87d6fbd53196b84c01a9 794 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 18 790 3.5E-248 T 28-03-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 CJD35_RS20890 6c4b6947c01f87d6fbd53196b84c01a9 794 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 184 386 5.0E-47 T 28-03-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 CJD35_RS20890 6c4b6947c01f87d6fbd53196b84c01a9 794 Gene3D G3DSA:3.40.50.300 145 733 4.9E-21 T 28-03-2018 CJD35_RS16470 938e63fd53411ace38649690c1c2b822 173 Pfam PF07715 TonB-dependent Receptor Plug Domain 82 151 8.1E-7 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS16470 938e63fd53411ace38649690c1c2b822 173 Gene3D G3DSA:2.170.130.10 55 165 2.3E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS16470 938e63fd53411ace38649690c1c2b822 173 SUPERFAMILY SSF56935 67 152 3.91E-13 T 28-03-2018 CJD35_RS08915 b00ca0d22cb980c143d8280264da4153 416 PIRSF PIRSF019422 2 415 9.0E-118 T 28-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CJD35_RS08915 b00ca0d22cb980c143d8280264da4153 416 Gene3D G3DSA:2.40.40.10 86 169 0.016 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJD35_RS08915 b00ca0d22cb980c143d8280264da4153 416 Gene3D G3DSA:2.40.240.50 170 319 8.6E-60 T 28-03-2018 CJD35_RS08915 b00ca0d22cb980c143d8280264da4153 416 SMART SM00925 161 316 8.5E-79 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CJD35_RS08915 b00ca0d22cb980c143d8280264da4153 416 Pfam PF03562 MltA specific insert domain 91 316 3.0E-75 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CJD35_RS08915 b00ca0d22cb980c143d8280264da4153 416 SUPERFAMILY SSF50685 91 410 1.92E-109 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CJD35_RS08915 b00ca0d22cb980c143d8280264da4153 416 Pfam PF06725 3D domain 336 404 2.1E-18 T 28-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CJD35_RS10575 7ed59d318c10b5c9f87655a0abd7b549 215 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 53 70 1.3E-41 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS10575 7ed59d318c10b5c9f87655a0abd7b549 215 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 76 99 1.3E-41 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS10575 7ed59d318c10b5c9f87655a0abd7b549 215 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 132 155 1.3E-41 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS10575 7ed59d318c10b5c9f87655a0abd7b549 215 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 27 48 1.3E-41 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS10575 7ed59d318c10b5c9f87655a0abd7b549 215 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 101 119 1.3E-41 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS10575 7ed59d318c10b5c9f87655a0abd7b549 215 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 188 211 1.3E-41 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS10575 7ed59d318c10b5c9f87655a0abd7b549 215 Pfam PF03379 CcmB protein 6 211 5.6E-45 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CJD35_RS10575 7ed59d318c10b5c9f87655a0abd7b549 215 PIRSF PIRSF002764 1 215 1.3E-54 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CJD35_RS00805 0b52418cef5bd4e0fbfacc0cafeeb6f1 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CJD35_RS00805 0b52418cef5bd4e0fbfacc0cafeeb6f1 304 Gene3D G3DSA:3.40.1190.20 4 302 2.4E-43 T 28-03-2018 IPR029056 Ribokinase-like CJD35_RS00805 0b52418cef5bd4e0fbfacc0cafeeb6f1 304 Pfam PF00294 pfkB family carbohydrate kinase 8 296 4.5E-45 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CJD35_RS00805 0b52418cef5bd4e0fbfacc0cafeeb6f1 304 SUPERFAMILY SSF53613 8 297 7.48E-57 T 28-03-2018 IPR029056 Ribokinase-like CJD35_RS11035 187c7c271b5b00c5154bcae354cde7cc 331 Pfam PF00482 Type II secretion system (T2SS), protein F 157 281 5.7E-28 T 28-03-2018 IPR018076 Type II secretion system F domain CJD35_RS05275 53a1ef10ede730c92009a1ecd784d219 337 TIGRFAM TIGR02782 TrbB_P: P-type conjugative transfer ATPase TrbB 18 321 9.6E-119 T 28-03-2018 IPR014149 Conjugative transfer, TrbB GO:0000746|GO:0005737 CJD35_RS05275 53a1ef10ede730c92009a1ecd784d219 337 SUPERFAMILY SSF52540 30 297 8.37E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05275 53a1ef10ede730c92009a1ecd784d219 337 Gene3D G3DSA:3.30.450.90 21 132 2.3E-21 T 28-03-2018 CJD35_RS05275 53a1ef10ede730c92009a1ecd784d219 337 Pfam PF00437 Type II/IV secretion system protein 29 299 7.2E-84 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CJD35_RS05275 53a1ef10ede730c92009a1ecd784d219 337 Gene3D G3DSA:3.40.50.300 133 316 3.0E-13 T 28-03-2018 CJD35_RS17840 872d0ee09288c835fcb1b3c4cae51483 206 Gene3D G3DSA:3.40.50.200 2 151 3.0E-20 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJD35_RS17840 872d0ee09288c835fcb1b3c4cae51483 206 Pfam PF00082 Subtilase family 5 129 2.4E-7 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJD35_RS17840 872d0ee09288c835fcb1b3c4cae51483 206 SUPERFAMILY SSF52743 3 204 6.68E-22 T 28-03-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 CJD35_RS17840 872d0ee09288c835fcb1b3c4cae51483 206 PRINTS PR00723 Subtilisin serine protease family (S8) signature 2 21 4.7E-6 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related CJD35_RS17840 872d0ee09288c835fcb1b3c4cae51483 206 PRINTS PR00723 Subtilisin serine protease family (S8) signature 45 58 4.7E-6 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related CJD35_RS17840 872d0ee09288c835fcb1b3c4cae51483 206 PRINTS PR00723 Subtilisin serine protease family (S8) signature 186 202 4.7E-6 T 28-03-2018 IPR015500 Peptidase S8, subtilisin-related CJD35_RS17840 872d0ee09288c835fcb1b3c4cae51483 206 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 7 18 - T 28-03-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site CJD35_RS09630 0f556d2a718d9ffca14913014f4248c3 362 Pfam PF01757 Acyltransferase family 18 334 3.7E-8 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CJD35_RS10100 940bad8e5046ac739b58b66317b91207 176 SUPERFAMILY SSF53098 2 159 5.06E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS10100 940bad8e5046ac739b58b66317b91207 176 Gene3D G3DSA:3.30.420.10 1 166 1.8E-9 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS06405 722f415a4f0a7f895b5c82028c8ed44d 163 Gene3D G3DSA:2.40.50.100 119 163 1.5E-9 T 28-03-2018 CJD35_RS06405 722f415a4f0a7f895b5c82028c8ed44d 163 Pfam PF00364 Biotin-requiring enzyme 87 160 1.7E-16 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CJD35_RS06405 722f415a4f0a7f895b5c82028c8ed44d 163 Gene3D G3DSA:2.40.50.100 41 118 0.19 T 28-03-2018 CJD35_RS06405 722f415a4f0a7f895b5c82028c8ed44d 163 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 117 134 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CJD35_RS06405 722f415a4f0a7f895b5c82028c8ed44d 163 SUPERFAMILY SSF51230 85 160 9.42E-18 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS06405 722f415a4f0a7f895b5c82028c8ed44d 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 90 103 8.8E-11 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CJD35_RS06405 722f415a4f0a7f895b5c82028c8ed44d 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 107 121 8.8E-11 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CJD35_RS06405 722f415a4f0a7f895b5c82028c8ed44d 163 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 122 135 8.8E-11 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CJD35_RS10515 01dc93db14b69bbe2b57ec67957cbd5f 211 Pfam PF06080 Protein of unknown function (DUF938) 15 208 8.4E-71 T 28-03-2018 IPR010342 Protein of unknown function DUF938 CJD35_RS10515 01dc93db14b69bbe2b57ec67957cbd5f 211 SUPERFAMILY SSF53335 18 207 1.3E-25 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS10515 01dc93db14b69bbe2b57ec67957cbd5f 211 Gene3D G3DSA:3.40.50.150 9 209 1.2E-21 T 28-03-2018 CJD35_RS09690 31883c2107830c5d441256932137d2b0 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 139 2.7E-58 T 28-03-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 CJD35_RS09690 31883c2107830c5d441256932137d2b0 143 Pfam PF02566 OsmC-like protein 45 138 7.5E-19 T 28-03-2018 IPR003718 OsmC/Ohr family CJD35_RS09690 31883c2107830c5d441256932137d2b0 143 SUPERFAMILY SSF82784 1 140 1.44E-38 T 28-03-2018 IPR003718 OsmC/Ohr family CJD35_RS09690 31883c2107830c5d441256932137d2b0 143 Gene3D G3DSA:3.30.300.20 7 142 1.4E-27 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CJD35_RS05610 2c301c369d00ad84982bb7c46dc41f77 772 SUPERFAMILY SSF46785 703 768 5.89E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05610 2c301c369d00ad84982bb7c46dc41f77 772 Pfam PF09397 Ftsk gamma domain 707 764 2.6E-24 T 28-03-2018 IPR018541 FtsK gamma domain CJD35_RS05610 2c301c369d00ad84982bb7c46dc41f77 772 SUPERFAMILY SSF52540 362 672 1.78E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05610 2c301c369d00ad84982bb7c46dc41f77 772 SMART SM00843 703 768 5.8E-33 T 28-03-2018 IPR018541 FtsK gamma domain CJD35_RS05610 2c301c369d00ad84982bb7c46dc41f77 772 Gene3D G3DSA:3.40.50.300 223 665 1.2E-51 T 28-03-2018 CJD35_RS05610 2c301c369d00ad84982bb7c46dc41f77 772 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 28 175 5.2E-15 T 28-03-2018 IPR025199 DNA translocase FtsK, 4TM region CJD35_RS05610 2c301c369d00ad84982bb7c46dc41f77 772 Gene3D G3DSA:1.10.10.10 705 759 3.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS05610 2c301c369d00ad84982bb7c46dc41f77 772 Pfam PF01580 FtsK/SpoIIIE family 393 600 3.7E-65 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CJD35_RS10490 2e653b616fb9cda23f0bf52b1c87a810 384 Gene3D G3DSA:1.10.3410.10 204 309 1.3E-20 T 28-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain CJD35_RS10490 2e653b616fb9cda23f0bf52b1c87a810 384 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 380 5.3E-88 T 28-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CJD35_RS10490 2e653b616fb9cda23f0bf52b1c87a810 384 SMART SM00471 63 211 1.0E-9 T 28-03-2018 IPR003607 HD/PDEase domain CJD35_RS10490 2e653b616fb9cda23f0bf52b1c87a810 384 Gene3D G3DSA:1.10.3210.10 7 203 1.9E-55 T 28-03-2018 CJD35_RS10490 2e653b616fb9cda23f0bf52b1c87a810 384 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 4 379 37.636 T 28-03-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 CJD35_RS10490 2e653b616fb9cda23f0bf52b1c87a810 384 Pfam PF01966 HD domain 67 201 8.8E-15 T 28-03-2018 IPR006674 HD domain CJD35_RS10490 2e653b616fb9cda23f0bf52b1c87a810 384 Pfam PF13286 Phosphohydrolase-associated domain 288 376 1.7E-24 T 28-03-2018 IPR026875 Phosphohydrolase-associated domain CJD35_RS10490 2e653b616fb9cda23f0bf52b1c87a810 384 SUPERFAMILY SSF109604 25 379 3.7E-82 T 28-03-2018 CJD35_RS00365 ce36dc8f92a71106681677d2b3165640 376 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 21 373 6.2E-106 T 28-03-2018 IPR024455 Phage capsid CJD35_RS00365 ce36dc8f92a71106681677d2b3165640 376 Pfam PF05065 Phage capsid family 86 373 4.5E-84 T 28-03-2018 IPR024455 Phage capsid CJD35_RS00365 ce36dc8f92a71106681677d2b3165640 376 SUPERFAMILY SSF56563 79 375 1.23E-73 T 28-03-2018 CJD35_RS00365 ce36dc8f92a71106681677d2b3165640 376 Gene3D G3DSA:3.30.2400.10 107 266 4.1E-30 T 28-03-2018 CJD35_RS16120 6735b8c245cb68cc85b32bc9c2f310d3 295 Gene3D G3DSA:3.90.580.10 6 70 1.8E-4 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS16120 6735b8c245cb68cc85b32bc9c2f310d3 295 Gene3D G3DSA:3.40.1360.10 183 292 1.7E-12 T 28-03-2018 CJD35_RS16120 6735b8c245cb68cc85b32bc9c2f310d3 295 Pfam PF13362 Toprim domain 196 285 9.8E-20 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS21535 412c7a560995f32e639853f236288828 1102 SUPERFAMILY SSF52540 113 214 4.08E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21535 412c7a560995f32e639853f236288828 1102 SUPERFAMILY SSF52540 55 86 4.08E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21535 412c7a560995f32e639853f236288828 1102 Gene3D G3DSA:3.40.50.300 35 237 1.5E-6 T 28-03-2018 CJD35_RS18415 412c7a560995f32e639853f236288828 1102 SUPERFAMILY SSF52540 113 214 4.08E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18415 412c7a560995f32e639853f236288828 1102 SUPERFAMILY SSF52540 55 86 4.08E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS18415 412c7a560995f32e639853f236288828 1102 Gene3D G3DSA:3.40.50.300 35 237 1.5E-6 T 28-03-2018 CJD35_RS09110 ad6fd9bdced0aad0d12852b57a18e872 268 Pfam PF04536 TPM domain 30 153 4.4E-40 T 28-03-2018 IPR007621 TPM domain CJD35_RS03510 59f34e28077d93937926cdaf779849e1 351 Pfam PF12412 Protein of unknown function (DUF3667) 76 119 9.1E-18 T 28-03-2018 IPR022134 Protein of unknown function DUF3667 CJD35_RS17395 d97d3cd34030fecdcdde3e6432b8d99b 527 Pfam PF01019 Gamma-glutamyltranspeptidase 26 522 1.3E-119 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS17395 d97d3cd34030fecdcdde3e6432b8d99b 527 Gene3D G3DSA:3.40.50.1100 121 502 4.5E-4 T 28-03-2018 CJD35_RS17395 d97d3cd34030fecdcdde3e6432b8d99b 527 SUPERFAMILY SSF56235 4 527 2.12E-143 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CJD35_RS17395 d97d3cd34030fecdcdde3e6432b8d99b 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 121 140 4.0E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS17395 d97d3cd34030fecdcdde3e6432b8d99b 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 249 268 4.0E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS17395 d97d3cd34030fecdcdde3e6432b8d99b 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 33 58 4.0E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS17395 d97d3cd34030fecdcdde3e6432b8d99b 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 365 383 4.0E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS17395 d97d3cd34030fecdcdde3e6432b8d99b 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 102 120 4.0E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS17395 d97d3cd34030fecdcdde3e6432b8d99b 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 341 359 4.0E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS17395 d97d3cd34030fecdcdde3e6432b8d99b 527 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 396 411 4.0E-24 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CJD35_RS02875 586036c0721a7be69e006c84f1c54938 160 Pfam PF01668 SmpB protein 15 157 6.6E-60 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CJD35_RS02875 586036c0721a7be69e006c84f1c54938 160 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 28-03-2018 IPR020081 SsrA-binding protein, conserved site CJD35_RS02875 586036c0721a7be69e006c84f1c54938 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 156 7.4E-57 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CJD35_RS02875 586036c0721a7be69e006c84f1c54938 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 3.0E-54 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CJD35_RS02875 586036c0721a7be69e006c84f1c54938 160 SUPERFAMILY SSF74982 11 139 4.05E-48 T 28-03-2018 IPR023620 Small protein B CJD35_RS02875 586036c0721a7be69e006c84f1c54938 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 68.787 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CJD35_RS02875 586036c0721a7be69e006c84f1c54938 160 Gene3D G3DSA:2.40.280.10 15 134 7.9E-47 T 28-03-2018 IPR023620 Small protein B CJD35_RS08195 34715637cc28dac8c20be8103d3ee5f0 371 Gene3D G3DSA:1.20.58.220 257 369 8.8E-7 T 28-03-2018 CJD35_RS08195 34715637cc28dac8c20be8103d3ee5f0 371 SUPERFAMILY SSF55811 4 141 3.11E-13 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJD35_RS08195 34715637cc28dac8c20be8103d3ee5f0 371 Pfam PF00293 NUDIX domain 15 121 4.8E-6 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CJD35_RS08195 34715637cc28dac8c20be8103d3ee5f0 371 Pfam PF01865 Protein of unknown function DUF47 170 368 2.6E-38 T 28-03-2018 IPR018445 Putative phosphate transport regulator CJD35_RS08195 34715637cc28dac8c20be8103d3ee5f0 371 Gene3D G3DSA:3.90.79.10 2 138 2.3E-12 T 28-03-2018 CJD35_RS11045 b20774f1a3d097699651594b914f3c28 214 Pfam PF09476 Pilus biogenesis CpaD protein (pilus_cpaD) 13 196 2.3E-39 T 28-03-2018 IPR019027 Pilus biogenesis CpaD-related CJD35_RS13080 6bb5d76cdc4a1e7e27f6b4d5d6e7fc63 160 Pfam PF08534 Redoxin 5 157 8.4E-36 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CJD35_RS13080 6bb5d76cdc4a1e7e27f6b4d5d6e7fc63 160 Gene3D G3DSA:3.40.30.10 1 160 1.3E-23 T 28-03-2018 CJD35_RS13080 6bb5d76cdc4a1e7e27f6b4d5d6e7fc63 160 SUPERFAMILY SSF52833 1 159 7.7E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS04385 b1d40c62a7a8a75a27acfb00b0df802b 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 28-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS04385 b1d40c62a7a8a75a27acfb00b0df802b 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.0E-22 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS04385 b1d40c62a7a8a75a27acfb00b0df802b 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 12.885 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS04385 b1d40c62a7a8a75a27acfb00b0df802b 55 Pfam PF00471 Ribosomal protein L33 7 53 4.6E-16 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS04385 b1d40c62a7a8a75a27acfb00b0df802b 55 SUPERFAMILY SSF57829 1 53 1.71E-17 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CJD35_RS03810 fc8142e2ea41780d9cbef4b4224907b5 129 Pfam PF04138 GtrA-like protein 13 126 3.8E-11 T 28-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CJD35_RS17675 c9e1e37b3ca31c94c7329059d68851be 291 Pfam PF05853 beta-keto acid cleavage enzyme 4 289 2.9E-81 T 28-03-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247|KEGG: 00600+2.3.1.24 CJD35_RS17675 c9e1e37b3ca31c94c7329059d68851be 291 Gene3D G3DSA:3.20.20.70 2 291 9.8E-84 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS20925 3aff7ae379b6a74bd4171bc2d10535db 260 Gene3D G3DSA:1.10.10.10 90 257 0.0015 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS20980 75f8bbf937df36719d6a7658f6ff36d8 290 PIRSF PIRSF037112 1 290 8.2E-104 T 28-03-2018 IPR017113 Antirestriction, ArdC CJD35_RS20980 75f8bbf937df36719d6a7658f6ff36d8 290 Pfam PF08401 Domain of unknown function (DUF1738) 9 120 1.6E-35 T 28-03-2018 IPR013610 Domain of unknown function DUF1738 CJD35_RS05770 c93ae0ce0b27ac7845fb883429870e6f 117 Gene3D G3DSA:3.40.1440.10 25 115 1.0E-13 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS05770 c93ae0ce0b27ac7845fb883429870e6f 117 Pfam PF01541 GIY-YIG catalytic domain 26 98 2.5E-9 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS05770 c93ae0ce0b27ac7845fb883429870e6f 117 SUPERFAMILY SSF82771 27 112 5.23E-16 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS02325 415e251a34afe875b63bb2d1ba257538 242 SUPERFAMILY SSF53335 62 210 3.25E-32 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS02325 415e251a34afe875b63bb2d1ba257538 242 Gene3D G3DSA:3.40.50.150 47 221 5.6E-27 T 28-03-2018 CJD35_RS02325 415e251a34afe875b63bb2d1ba257538 242 Pfam PF13847 Methyltransferase domain 72 181 1.1E-11 T 28-03-2018 IPR025714 Methyltransferase domain CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 14 381 1.3E-148 T 28-03-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 ProSitePatterns PS00480 Citrate synthase signature. 264 276 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 Gene3D G3DSA:1.10.580.10 21 361 2.4E-80 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 SUPERFAMILY SSF48256 14 381 9.16E-120 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 PRINTS PR00143 Citrate synthase signature 132 145 3.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 PRINTS PR00143 Citrate synthase signature 204 232 3.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 PRINTS PR00143 Citrate synthase signature 257 277 3.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 PRINTS PR00143 Citrate synthase signature 182 197 3.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 PRINTS PR00143 Citrate synthase signature 314 330 3.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 PRINTS PR00143 Citrate synthase signature 334 348 3.9E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 PIRSF PIRSF001369 7 382 1.4E-104 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type CJD35_RS17050 800fb7ef900c2ca54d20b2a2dbc4c555 385 Pfam PF00285 Citrate synthase, C-terminal domain 15 363 3.4E-110 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CJD35_RS09660 303b4390e54300fa1d92fd22f0d611ff 232 Pfam PF09976 Tetratricopeptide repeat-like domain 28 189 9.4E-15 T 28-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CJD35_RS09660 303b4390e54300fa1d92fd22f0d611ff 232 Gene3D G3DSA:1.25.20.10 4 219 1.7E-4 T 28-03-2018 CJD35_RS14380 a540b8c2289ec995dd01a1410fdddf07 478 Pfam PF00361 Proton-conducting membrane transporter 123 416 2.5E-77 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS14380 a540b8c2289ec995dd01a1410fdddf07 478 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 8 461 9.3E-139 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CJD35_RS14380 a540b8c2289ec995dd01a1410fdddf07 478 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 5 466 17.783 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CJD35_RS01275 2641e784836ffcb75dd6ad0c55844770 377 Pfam PF07995 Glucose / Sorbosone dehydrogenase 41 365 9.7E-121 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase CJD35_RS01275 2641e784836ffcb75dd6ad0c55844770 377 Gene3D G3DSA:2.120.10.30 17 278 3.1E-52 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS01275 2641e784836ffcb75dd6ad0c55844770 377 Gene3D G3DSA:2.120.10.30 279 371 2.2E-19 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS01275 2641e784836ffcb75dd6ad0c55844770 377 SUPERFAMILY SSF50952 26 363 2.88E-40 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CJD35_RS15790 c5e4af472daa7b6c7a701939299077da 364 SMART SM00587 121 303 4.1E-4 T 28-03-2018 IPR015897 CHK kinase-like CJD35_RS15790 c5e4af472daa7b6c7a701939299077da 364 Gene3D G3DSA:3.90.1200.10 130 333 1.7E-18 T 28-03-2018 CJD35_RS15790 c5e4af472daa7b6c7a701939299077da 364 Pfam PF02958 Ecdysteroid kinase 42 299 7.2E-13 T 28-03-2018 IPR004119 Protein of unknown function DUF227 CJD35_RS15790 c5e4af472daa7b6c7a701939299077da 364 SUPERFAMILY SSF56112 13 327 5.44E-30 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS01550 3b12c72d179b6101191f3aa3e5a0f047 406 PIRSF PIRSF000108 1 405 4.4E-222 T 28-03-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CJD35_RS01550 3b12c72d179b6101191f3aa3e5a0f047 406 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 393 3.0E-71 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CJD35_RS01550 3b12c72d179b6101191f3aa3e5a0f047 406 SMART SM01329 9 394 2.9E-128 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CJD35_RS01550 3b12c72d179b6101191f3aa3e5a0f047 406 SUPERFAMILY SSF53659 1 402 2.88E-152 T 28-03-2018 CJD35_RS01550 3b12c72d179b6101191f3aa3e5a0f047 406 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 269 288 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CJD35_RS01550 3b12c72d179b6101191f3aa3e5a0f047 406 Gene3D G3DSA:3.40.718.10 1 406 5.5E-134 T 28-03-2018 CJD35_RS01550 3b12c72d179b6101191f3aa3e5a0f047 406 TIGRFAM TIGR00127 nadp_idh_euk: isocitrate dehydrogenase, NADP-dependent 3 403 2.1E-210 T 28-03-2018 IPR004790 Isocitrate dehydrogenase NADP-dependent GO:0004450|GO:0006102|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CJD35_RS03200 dd27c414674c922fd6cbc30292c5aa45 164 SUPERFAMILY SSF103088 65 142 7.46E-7 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS03200 dd27c414674c922fd6cbc30292c5aa45 164 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 11 51 3.1E-9 T 28-03-2018 IPR025713 Motility protein B, N-terminal domain CJD35_RS03200 dd27c414674c922fd6cbc30292c5aa45 164 Pfam PF00691 OmpA family 66 141 9.8E-8 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS03200 dd27c414674c922fd6cbc30292c5aa45 164 Gene3D G3DSA:3.30.1330.60 16 149 6.6E-10 T 28-03-2018 IPR006665 OmpA-like domain CJD35_RS17790 e387d2259eaf6f42001c61118b7b1e5f 451 Gene3D G3DSA:1.20.1600.10 17 449 1.2E-86 T 28-03-2018 CJD35_RS17790 e387d2259eaf6f42001c61118b7b1e5f 451 SUPERFAMILY SSF56954 2 447 5.62E-97 T 28-03-2018 CJD35_RS17790 e387d2259eaf6f42001c61118b7b1e5f 451 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 9 445 8.8E-98 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CJD35_RS17790 e387d2259eaf6f42001c61118b7b1e5f 451 Pfam PF02321 Outer membrane efflux protein 63 240 1.6E-24 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS17790 e387d2259eaf6f42001c61118b7b1e5f 451 Pfam PF02321 Outer membrane efflux protein 271 447 6.1E-24 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS11015 6f53bd85babb28a08df94b53f7fb0999 473 Gene3D G3DSA:3.40.50.1220 297 472 6.6E-79 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS11015 6f53bd85babb28a08df94b53f7fb0999 473 SUPERFAMILY SSF52467 299 471 1.26E-71 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CJD35_RS11015 6f53bd85babb28a08df94b53f7fb0999 473 Pfam PF02233 NAD(P) transhydrogenase beta subunit 12 469 2.5E-192 T 28-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CJD35_RS11015 6f53bd85babb28a08df94b53f7fb0999 473 PIRSF PIRSF000204 7 473 4.7E-211 T 28-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CJD35_RS18000 5ad9758a319fb7e22c741398dc7a1655 276 SUPERFAMILY SSF51658 27 224 2.24E-10 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CJD35_RS18000 5ad9758a319fb7e22c741398dc7a1655 276 Gene3D G3DSA:3.20.20.150 4 276 2.5E-86 T 28-03-2018 CJD35_RS18000 5ad9758a319fb7e22c741398dc7a1655 276 Hamap MF_00697 UPF0276 protein . 8 276 45.852 T 28-03-2018 IPR007801 Uncharacterised protein family UPF0276 CJD35_RS18000 5ad9758a319fb7e22c741398dc7a1655 276 Pfam PF05114 Protein of unknown function (DUF692) 7 268 7.6E-109 T 28-03-2018 IPR007801 Uncharacterised protein family UPF0276 CJD35_RS16330 a25cb2de62ba632b5afd2baa6de78111 284 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 262 1.7E-47 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS16330 a25cb2de62ba632b5afd2baa6de78111 284 SUPERFAMILY SSF52096 6 263 9.77E-68 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS16330 a25cb2de62ba632b5afd2baa6de78111 284 Gene3D G3DSA:3.90.226.10 1 282 1.4E-64 T 28-03-2018 CJD35_RS19495 d344c080486bb95b37f917df4f76d8e8 203 Gene3D G3DSA:3.40.50.150 1 167 1.7E-18 T 28-03-2018 CJD35_RS19495 d344c080486bb95b37f917df4f76d8e8 203 SUPERFAMILY SSF53335 27 182 1.01E-20 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS19495 d344c080486bb95b37f917df4f76d8e8 203 Pfam PF13649 Methyltransferase domain 42 133 1.6E-11 T 28-03-2018 CJD35_RS06165 652340cf51906032c793165c972629f7 380 SMART SM00897 32 235 6.8E-52 T 28-03-2018 IPR013702 FIST domain, N-terminal CJD35_RS06165 652340cf51906032c793165c972629f7 380 SMART SM01204 236 366 2.6E-32 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CJD35_RS06165 652340cf51906032c793165c972629f7 380 Pfam PF08495 FIST N domain 37 233 7.1E-31 T 28-03-2018 IPR013702 FIST domain, N-terminal CJD35_RS06165 652340cf51906032c793165c972629f7 380 Pfam PF10442 FIST C domain 236 365 2.4E-14 T 28-03-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CJD35_RS08910 57d730519439942fb123ddcc6a8fd289 217 SMART SM00978 70 216 5.1E-44 T 28-03-2018 IPR007379 Tim44-like domain CJD35_RS08910 57d730519439942fb123ddcc6a8fd289 217 ProDom PD111165 RP434 4 212 6.0E-5 T 28-03-2018 CJD35_RS08910 57d730519439942fb123ddcc6a8fd289 217 Pfam PF04280 Tim44-like domain 73 215 3.8E-42 T 28-03-2018 IPR007379 Tim44-like domain CJD35_RS08910 57d730519439942fb123ddcc6a8fd289 217 SUPERFAMILY SSF54427 13 214 7.74E-46 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS08910 57d730519439942fb123ddcc6a8fd289 217 PIRSF PIRSF031890 1 217 2.3E-58 T 28-03-2018 IPR016985 Uncharacterised conserved protein UCP031890, Tim44-related CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 449 6.3E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 Gene3D G3DSA:1.10.287.130 237 287 2.9E-8 T 28-03-2018 CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 Gene3D G3DSA:3.30.565.10 288 451 7.2E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 SUPERFAMILY SSF55874 294 450 4.06E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 7.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 7.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 7.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 7.3E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 SMART SM00388 247 305 2.7E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 SMART SM00387 344 451 5.5E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 248 303 2.2E-6 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS08245 42c0dc24f6b8500fb5f68b1a8d38af56 451 SUPERFAMILY SSF47384 230 303 4.9E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CJD35_RS14690 776e5615c7d53f399845c9d067213c03 494 ProSitePatterns PS00571 Amidases signature. 158 189 - T 28-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 CJD35_RS14690 776e5615c7d53f399845c9d067213c03 494 SUPERFAMILY SSF75304 4 491 8.9E-149 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJD35_RS14690 776e5615c7d53f399845c9d067213c03 494 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 20 483 8.5E-166 T 28-03-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJD35_RS14690 776e5615c7d53f399845c9d067213c03 494 Pfam PF01425 Amidase 35 474 7.7E-144 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJD35_RS14690 776e5615c7d53f399845c9d067213c03 494 Gene3D G3DSA:3.90.1300.10 2 493 2.5E-158 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJD35_RS14690 776e5615c7d53f399845c9d067213c03 494 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 12 485 88.746 T 28-03-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 CJD35_RS14260 5cdf7399757a9fd9fa83fc0d76f4f468 901 Gene3D G3DSA:2.40.170.20 181 901 7.6E-49 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS14260 5cdf7399757a9fd9fa83fc0d76f4f468 901 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 178 3.8E-9 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS14260 5cdf7399757a9fd9fa83fc0d76f4f468 901 Gene3D G3DSA:2.170.130.10 61 180 3.3E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS14260 5cdf7399757a9fd9fa83fc0d76f4f468 901 Pfam PF00593 TonB dependent receptor 384 896 3.1E-19 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS14260 5cdf7399757a9fd9fa83fc0d76f4f468 901 SUPERFAMILY SSF56935 269 901 1.25E-70 T 28-03-2018 CJD35_RS14260 5cdf7399757a9fd9fa83fc0d76f4f468 901 SUPERFAMILY SSF56935 64 199 1.25E-70 T 28-03-2018 CJD35_RS18990 b821132a5e2d062ddeed85fac44d20e5 174 Pfam PF05284 Protein of unknown function (DUF736) 2 104 2.0E-22 T 28-03-2018 IPR007948 Protein of unknown function DUF736 CJD35_RS01715 7ae25476fdd9fcc09d69f6da2bc7a629 290 Pfam PF10670 Domain of unknown function (DUF4198) 20 245 5.9E-71 T 28-03-2018 IPR019613 Protein of unknown function DUF4198 CJD35_RS01715 7ae25476fdd9fcc09d69f6da2bc7a629 290 Gene3D G3DSA:2.60.40.10 178 253 0.036 T 28-03-2018 IPR013783 Immunoglobulin-like fold CJD35_RS11705 570d1c7a37e11224b1eabc8c3a0caeba 506 Pfam PF13807 G-rich domain on putative tyrosine kinase 361 436 2.5E-7 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain CJD35_RS11705 570d1c7a37e11224b1eabc8c3a0caeba 506 Pfam PF02706 Chain length determinant protein 8 92 2.3E-7 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CJD35_RS11705 570d1c7a37e11224b1eabc8c3a0caeba 506 TIGRFAM TIGR03007 pepcterm_ChnLen: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily 8 499 1.7E-101 T 28-03-2018 IPR014345 PEP-CTERM locus polysaccharide chain length determinant CJD35_RS11705 570d1c7a37e11224b1eabc8c3a0caeba 506 Gene3D G3DSA:3.30.1890.10 37 414 1.4E-13 T 28-03-2018 CJD35_RS08335 9296b14370c40ca6b9bed326dd55a43f 300 Pfam PF00892 EamA-like transporter family 11 145 1.9E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS08335 9296b14370c40ca6b9bed326dd55a43f 300 SUPERFAMILY SSF103481 209 288 7.06E-7 T 28-03-2018 CJD35_RS08335 9296b14370c40ca6b9bed326dd55a43f 300 SUPERFAMILY SSF103481 51 146 1.09E-9 T 28-03-2018 CJD35_RS08335 9296b14370c40ca6b9bed326dd55a43f 300 TIGRFAM TIGR00688 rarD: protein RarD 10 261 6.9E-62 T 28-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 CJD35_RS18620 e326afd904f84b3f4bd8ffcf20070c67 340 Pfam PF06834 TraU protein 34 339 1.6E-116 T 28-03-2018 IPR009649 TraU CJD35_RS04645 e9ae4e9301f831b22010162a9ddd1152 179 SUPERFAMILY SSF50324 6 174 5.36E-62 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CJD35_RS04645 e9ae4e9301f831b22010162a9ddd1152 179 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CJD35_RS04645 e9ae4e9301f831b22010162a9ddd1152 179 Pfam PF00719 Inorganic pyrophosphatase 18 174 9.8E-50 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CJD35_RS04645 e9ae4e9301f831b22010162a9ddd1152 179 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.329 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CJD35_RS04645 e9ae4e9301f831b22010162a9ddd1152 179 Gene3D G3DSA:3.90.80.10 3 179 1.5E-49 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CJD35_RS02285 deedc4b055ce2a91c7694cce051731d2 157 Gene3D G3DSA:1.10.10.10 9 155 1.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02285 deedc4b055ce2a91c7694cce051731d2 157 SUPERFAMILY SSF46785 66 148 3.24E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 SUPERFAMILY SSF51735 1 250 2.95E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 4.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.4E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 Gene3D G3DSA:3.40.50.720 7 250 2.9E-51 T 28-03-2018 CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 Pfam PF00106 short chain dehydrogenase 8 200 3.5E-43 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 2.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 2.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS17640 ef8cb40aa19e536405cd9ed5572c1c8f 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.1E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS14185 f8721f26392fe780439a4cf1f7392871 283 SUPERFAMILY SSF52540 47 171 2.76E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14185 f8721f26392fe780439a4cf1f7392871 283 Gene3D G3DSA:3.40.50.300 47 173 5.8E-20 T 28-03-2018 CJD35_RS14185 f8721f26392fe780439a4cf1f7392871 283 PIRSF PIRSF034285 1 262 3.6E-62 T 28-03-2018 IPR017026 Inducible mutagenesis protein A CJD35_RS04895 128fda01cc765eb448b65346c8530398 211 Gene3D G3DSA:1.10.287.70 99 211 2.4E-4 T 28-03-2018 CJD35_RS04895 128fda01cc765eb448b65346c8530398 211 Pfam PF07077 Protein of unknown function (DUF1345) 34 204 1.2E-51 T 28-03-2018 IPR009781 Protein of unknown function DUF1345 CJD35_RS05615 93b36a8814f11f57cfbe14a6947bb216 164 Pfam PF00583 Acetyltransferase (GNAT) family 47 136 4.6E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS05615 93b36a8814f11f57cfbe14a6947bb216 164 SUPERFAMILY SSF55729 3 151 1.29E-34 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS05615 93b36a8814f11f57cfbe14a6947bb216 164 Gene3D G3DSA:3.40.630.30 1 158 7.2E-32 T 28-03-2018 CJD35_RS19525 a7bf0978f095ef70950832fda65dfdee 321 Pfam PF13660 Domain of unknown function (DUF4147) 16 237 3.2E-67 T 28-03-2018 IPR025286 MOFRL-associated domain Reactome: R-HSA-70350 CJD35_RS19525 a7bf0978f095ef70950832fda65dfdee 321 Gene3D G3DSA:3.40.50.10180 16 261 2.0E-73 T 28-03-2018 CJD35_RS19525 a7bf0978f095ef70950832fda65dfdee 321 SUPERFAMILY SSF82544 14 299 1.18E-73 T 28-03-2018 CJD35_RS06365 173107a007db36cb1c2e2623ed332bf6 339 Pfam PF04909 Amidohydrolase 16 325 4.9E-31 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS06365 173107a007db36cb1c2e2623ed332bf6 339 Gene3D G3DSA:3.20.20.140 2 334 7.2E-31 T 28-03-2018 CJD35_RS06365 173107a007db36cb1c2e2623ed332bf6 339 SUPERFAMILY SSF51556 14 326 3.45E-40 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS05380 19ea40adb461cc12895fef0aa3c50d9e 367 Gene3D G3DSA:1.10.443.10 206 367 2.1E-23 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS05380 19ea40adb461cc12895fef0aa3c50d9e 367 Gene3D G3DSA:1.10.150.130 87 205 7.7E-14 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS05380 19ea40adb461cc12895fef0aa3c50d9e 367 Pfam PF13356 Arm DNA-binding domain 3 87 1.6E-20 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CJD35_RS05380 19ea40adb461cc12895fef0aa3c50d9e 367 SUPERFAMILY SSF56349 99 364 6.47E-53 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS05380 19ea40adb461cc12895fef0aa3c50d9e 367 Pfam PF00589 Phage integrase family 209 366 6.7E-20 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS19730 d5ce82f21ebf1b3b3b25c11a70a8c521 445 Pfam PF03743 Bacterial conjugation TrbI-like protein 236 441 3.2E-31 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CJD35_RS19730 d5ce82f21ebf1b3b3b25c11a70a8c521 445 Gene3D G3DSA:1.20.1170.10 56 196 2.4E-4 T 28-03-2018 CJD35_RS21710 51b9e9f5070a638f8c184d1495536008 216 Pfam PF01545 Cation efflux family 26 198 3.7E-20 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJD35_RS21710 51b9e9f5070a638f8c184d1495536008 216 Gene3D G3DSA:1.20.1510.10 21 202 2.0E-26 T 28-03-2018 CJD35_RS21710 51b9e9f5070a638f8c184d1495536008 216 SUPERFAMILY SSF161111 21 201 1.19E-37 T 28-03-2018 CJD35_RS16485 551c410f13601a2e81c7028ea8a16053 347 Gene3D G3DSA:1.20.950.20 141 346 8.5E-4 T 28-03-2018 CJD35_RS16485 551c410f13601a2e81c7028ea8a16053 347 Pfam PF03929 PepSY-associated TM region 8 333 2.1E-44 T 28-03-2018 IPR005625 PepSY-associated TM protein CJD35_RS15820 7927c556630a63a9bf74550d8f159262 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 3.1E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15820 7927c556630a63a9bf74550d8f159262 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.1E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15820 7927c556630a63a9bf74550d8f159262 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.5E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15820 7927c556630a63a9bf74550d8f159262 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.5E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15820 7927c556630a63a9bf74550d8f159262 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15820 7927c556630a63a9bf74550d8f159262 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.5E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15820 7927c556630a63a9bf74550d8f159262 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.5E-20 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15820 7927c556630a63a9bf74550d8f159262 280 Gene3D G3DSA:3.40.50.720 1 236 8.6E-43 T 28-03-2018 CJD35_RS15820 7927c556630a63a9bf74550d8f159262 280 SUPERFAMILY SSF51735 1 228 5.03E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15820 7927c556630a63a9bf74550d8f159262 280 Pfam PF00106 short chain dehydrogenase 4 197 2.9E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS04605 da0f7e6d5a81c526fc592724069d41b9 125 Gene3D G3DSA:3.10.129.10 1 125 4.6E-29 T 28-03-2018 CJD35_RS04605 da0f7e6d5a81c526fc592724069d41b9 125 SUPERFAMILY SSF54637 6 124 3.08E-33 T 28-03-2018 IPR029069 HotDog domain CJD35_RS04605 da0f7e6d5a81c526fc592724069d41b9 125 Pfam PF03061 Thioesterase superfamily 22 92 7.9E-15 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CJD35_RS17100 1b8a14bedf045537354f8941c831efff 339 Gene3D G3DSA:3.50.30.50 77 339 1.6E-37 T 28-03-2018 CJD35_RS17100 1b8a14bedf045537354f8941c831efff 339 Pfam PF04199 Putative cyclase 126 260 1.2E-15 T 28-03-2018 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 CJD35_RS17100 1b8a14bedf045537354f8941c831efff 339 SUPERFAMILY SSF102198 128 338 6.28E-17 T 28-03-2018 CJD35_RS02310 479dfb03b39dbec87c772979c2d93e60 406 Pfam PF05816 Toxic anion resistance protein (TelA) 66 382 9.0E-95 T 28-03-2018 IPR008863 Toxic anion resistance CJD35_RS12185 4676d61f537eb50e4268d08d54b1e9a0 332 Gene3D G3DSA:3.40.50.1100 140 320 1.3E-32 T 28-03-2018 CJD35_RS12185 4676d61f537eb50e4268d08d54b1e9a0 332 Gene3D G3DSA:3.40.50.1100 30 139 2.1E-27 T 28-03-2018 CJD35_RS12185 4676d61f537eb50e4268d08d54b1e9a0 332 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 305 3.9E-60 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS12185 4676d61f537eb50e4268d08d54b1e9a0 332 SUPERFAMILY SSF53686 8 313 8.12E-75 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CJD35_RS20930 ba77005fe742f21084c21446e022164c 293 Pfam PF13362 Toprim domain 201 290 3.7E-11 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS20930 ba77005fe742f21084c21446e022164c 293 Gene3D G3DSA:3.40.1360.10 185 292 2.9E-5 T 28-03-2018 CJD35_RS20930 ba77005fe742f21084c21446e022164c 293 SUPERFAMILY SSF57783 21 54 8.84E-5 T 28-03-2018 CJD35_RS20930 ba77005fe742f21084c21446e022164c 293 Gene3D G3DSA:3.90.580.10 2 74 9.7E-7 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS07040 f5a7d9454bf8f48bfd8955e45de825e3 123 Gene3D G3DSA:2.30.30.390 17 121 2.3E-27 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CJD35_RS07040 f5a7d9454bf8f48bfd8955e45de825e3 123 SMART SM00992 19 118 2.3E-56 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CJD35_RS07040 f5a7d9454bf8f48bfd8955e45de825e3 123 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 19 117 3.0E-38 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CJD35_RS07040 f5a7d9454bf8f48bfd8955e45de825e3 123 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 21 110 3.1E-25 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CJD35_RS07040 f5a7d9454bf8f48bfd8955e45de825e3 123 SUPERFAMILY SSF141255 20 111 3.4E-33 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CJD35_RS16510 1015e19a9d9868ba6399ce55f033b5c8 326 SUPERFAMILY SSF161098 105 308 1.96E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJD35_RS16510 1015e19a9d9868ba6399ce55f033b5c8 326 Gene3D G3DSA:1.10.3720.10 14 313 1.7E-39 T 28-03-2018 CJD35_RS16510 1015e19a9d9868ba6399ce55f033b5c8 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 126 324 5.4E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJD35_RS07995 10e8ad40de8d43cec175a023ff73c7d3 353 Gene3D G3DSA:2.70.98.10 36 353 3.7E-39 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CJD35_RS07995 10e8ad40de8d43cec175a023ff73c7d3 353 SUPERFAMILY SSF74650 50 348 8.79E-33 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CJD35_RS07995 10e8ad40de8d43cec175a023ff73c7d3 353 Pfam PF01263 Aldose 1-epimerase 118 245 2.0E-17 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CJD35_RS04425 eed0881429c1a850edc916a900b44a41 422 Gene3D G3DSA:1.20.1250.20 12 205 7.4E-29 T 28-03-2018 CJD35_RS04425 eed0881429c1a850edc916a900b44a41 422 Pfam PF07690 Major Facilitator Superfamily 22 367 1.5E-30 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS04425 eed0881429c1a850edc916a900b44a41 422 SUPERFAMILY SSF103473 11 399 5.89E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS04425 eed0881429c1a850edc916a900b44a41 422 Gene3D G3DSA:1.20.1250.20 212 409 4.0E-8 T 28-03-2018 CJD35_RS08030 1fe9f22894e54d1fbfd5befd28108cb8 480 Gene3D G3DSA:3.40.309.10 265 460 1.3E-64 T 28-03-2018 CJD35_RS08030 1fe9f22894e54d1fbfd5befd28108cb8 480 Pfam PF00171 Aldehyde dehydrogenase family 17 474 7.6E-154 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS08030 1fe9f22894e54d1fbfd5befd28108cb8 480 Gene3D G3DSA:3.40.605.10 2 264 2.2E-84 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS08030 1fe9f22894e54d1fbfd5befd28108cb8 480 SUPERFAMILY SSF53720 5 474 2.09E-151 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS20860 cc582ccaa0d909d859db8f271f620385 280 Pfam PF03524 Conjugal transfer protein 35 255 5.6E-56 T 28-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CJD35_RS20545 c550d5b6e7aecf3d2eb02910762e3098 149 Pfam PF13700 Domain of unknown function (DUF4158) 47 94 1.0E-8 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CJD35_RS16855 af2db6761a54dfcdbb7f5b47e7897766 186 Pfam PF11578 Protein of unknown function (DUF3237) 37 185 1.5E-35 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS16855 af2db6761a54dfcdbb7f5b47e7897766 186 Hamap MF_00775 UPF0311 protein . 37 186 25.156 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS16855 af2db6761a54dfcdbb7f5b47e7897766 186 Gene3D G3DSA:2.40.160.20 30 186 5.3E-43 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS16270 a5eb323695807b93d2d75b1173435f4c 422 SUPERFAMILY SSF56954 9 411 5.62E-45 T 28-03-2018 CJD35_RS16270 a5eb323695807b93d2d75b1173435f4c 422 Gene3D G3DSA:1.20.1600.10 28 414 1.0E-35 T 28-03-2018 CJD35_RS16270 a5eb323695807b93d2d75b1173435f4c 422 Pfam PF02321 Outer membrane efflux protein 105 216 2.0E-7 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS16270 a5eb323695807b93d2d75b1173435f4c 422 Pfam PF02321 Outer membrane efflux protein 247 410 5.5E-11 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS20150 4fe4314a0a419ffb6e1c70c18c6d833f 200 Gene3D G3DSA:3.40.630.30 37 196 1.9E-5 T 28-03-2018 CJD35_RS20150 4fe4314a0a419ffb6e1c70c18c6d833f 200 SUPERFAMILY SSF55729 113 179 1.91E-5 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS22180 c7d64615a4966568b6f817f1aa2fa647 150 Pfam PF08808 RES domain 3 143 3.8E-19 T 28-03-2018 IPR014914 RES domain CJD35_RS22180 c7d64615a4966568b6f817f1aa2fa647 150 SMART SM00953 15 138 2.1E-16 T 28-03-2018 IPR014914 RES domain CJD35_RS02795 feb90bf2eb8d7285665aec4a65c9430f 262 Pfam PF12697 Alpha/beta hydrolase family 4 215 2.9E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS02795 feb90bf2eb8d7285665aec4a65c9430f 262 SUPERFAMILY SSF53474 2 252 4.05E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS02795 feb90bf2eb8d7285665aec4a65c9430f 262 Gene3D G3DSA:3.40.50.1820 2 255 5.8E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS19260 fa15e791bd2632a9b87d787ba788cbb8 222 SUPERFAMILY SSF102588 16 211 6.28E-30 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CJD35_RS19260 fa15e791bd2632a9b87d787ba788cbb8 222 Gene3D G3DSA:3.40.50.10320 12 220 4.1E-27 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CJD35_RS19260 fa15e791bd2632a9b87d787ba788cbb8 222 Pfam PF02585 GlcNAc-PI de-N-acetylase 18 145 1.7E-16 T 28-03-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 CJD35_RS10015 601c5125e8013026b54854984a18ae66 276 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 151 171 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CJD35_RS10015 601c5125e8013026b54854984a18ae66 276 Pfam PF00795 Carbon-nitrogen hydrolase 2 257 1.7E-54 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS10015 601c5125e8013026b54854984a18ae66 276 SUPERFAMILY SSF56317 1 265 4.45E-76 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS10015 601c5125e8013026b54854984a18ae66 276 Gene3D G3DSA:3.60.110.10 1 275 1.5E-68 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS11470 c0cdc648bb6ded313620e533dda008d3 722 Pfam PF00574 Clp protease 27 165 4.1E-27 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CJD35_RS11470 c0cdc648bb6ded313620e533dda008d3 722 SUPERFAMILY SSF52096 3 167 6.97E-43 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS11470 c0cdc648bb6ded313620e533dda008d3 722 PRINTS PR00127 Clp protease catalytic subunit P signature 32 52 9.2E-9 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJD35_RS11470 c0cdc648bb6ded313620e533dda008d3 722 PRINTS PR00127 Clp protease catalytic subunit P signature 66 83 9.2E-9 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJD35_RS11470 c0cdc648bb6ded313620e533dda008d3 722 PRINTS PR00127 Clp protease catalytic subunit P signature 142 161 9.2E-9 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CJD35_RS11470 c0cdc648bb6ded313620e533dda008d3 722 Gene3D G3DSA:3.90.226.10 15 175 7.3E-26 T 28-03-2018 CJD35_RS16550 e49059004e7843dba22038de893a7b43 169 Pfam PF14352 Domain of unknown function (DUF4402) 48 168 2.2E-16 T 28-03-2018 IPR025514 Protein of unknown function DUF4402 CJD35_RS09040 c1b90aa0034fb252bb036daaddf093f3 236 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 216 9.9E-74 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CJD35_RS09040 c1b90aa0034fb252bb036daaddf093f3 236 Gene3D G3DSA:3.40.1080.10 1 236 2.4E-95 T 28-03-2018 CJD35_RS09040 c1b90aa0034fb252bb036daaddf093f3 236 SMART SM00882 6 218 1.7E-89 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS09040 c1b90aa0034fb252bb036daaddf093f3 236 Pfam PF01144 Coenzyme A transferase 9 215 5.5E-77 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS09040 c1b90aa0034fb252bb036daaddf093f3 236 SUPERFAMILY SSF100950 3 231 1.05E-86 T 28-03-2018 CJD35_RS22220 f423fd57a63c0d70274ff3fbbdf04b23 965 Pfam PF13700 Domain of unknown function (DUF4158) 6 171 5.9E-44 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CJD35_RS22220 f423fd57a63c0d70274ff3fbbdf04b23 965 Pfam PF01526 Tn3 transposase DDE domain 571 957 5.2E-129 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS00520 4ae7fdf02c339200c26670ce93062adf 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 122 1.4E-20 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS00520 4ae7fdf02c339200c26670ce93062adf 128 SUPERFAMILY SSF54593 3 124 3.36E-33 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS00520 4ae7fdf02c339200c26670ce93062adf 128 Gene3D G3DSA:3.10.180.10 1 128 6.7E-30 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS05835 ca793aff7d53706941afddbc2f8a398f 240 Pfam PF03741 Integral membrane protein TerC family 43 226 6.1E-44 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CJD35_RS05835 ca793aff7d53706941afddbc2f8a398f 240 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 41 226 2.3E-59 T 28-03-2018 IPR022301 Integral membrane protein YjbE CJD35_RS02640 d6db5290c65976c4bdcd02fdabdc373e 302 SUPERFAMILY SSF56317 10 236 2.22E-14 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS02640 d6db5290c65976c4bdcd02fdabdc373e 302 Gene3D G3DSA:3.60.110.10 3 279 2.3E-11 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS20810 ab29a14374e08b336294e6ee783b8c53 652 Pfam PF01526 Tn3 transposase DDE domain 284 650 5.9E-135 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS16170 f143c75962f1c39ab312a9347db73ab4 301 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 20 208 3.5E-25 T 28-03-2018 IPR008775 Phytanoyl-CoA dioxygenase CJD35_RS16170 f143c75962f1c39ab312a9347db73ab4 301 SUPERFAMILY SSF51197 10 251 4.85E-48 T 28-03-2018 CJD35_RS16170 f143c75962f1c39ab312a9347db73ab4 301 Gene3D G3DSA:2.60.120.620 1 229 3.9E-37 T 28-03-2018 CJD35_RS00855 191c94afa85407dc4410622c1a8d2895 84 Gene3D G3DSA:3.10.20.30 2 84 4.4E-16 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS00855 191c94afa85407dc4410622c1a8d2895 84 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 3 84 4.5E-19 T 28-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 CJD35_RS00855 191c94afa85407dc4410622c1a8d2895 84 SUPERFAMILY SSF54285 1 82 7.29E-18 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CJD35_RS00855 191c94afa85407dc4410622c1a8d2895 84 Pfam PF02597 ThiS family 4 84 1.2E-13 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CJD35_RS01645 4cb3efe233dce27e4f9650b212420e7c 254 Gene3D G3DSA:3.90.550.10 5 250 2.8E-37 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS01645 4cb3efe233dce27e4f9650b212420e7c 254 SUPERFAMILY SSF53448 4 244 1.28E-38 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS01645 4cb3efe233dce27e4f9650b212420e7c 254 Pfam PF00483 Nucleotidyl transferase 5 141 3.9E-14 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CJD35_RS19325 1730246183805dc34be4989212c3c958 342 Gene3D G3DSA:3.20.20.140 86 335 4.0E-34 T 28-03-2018 CJD35_RS19325 1730246183805dc34be4989212c3c958 342 Pfam PF04909 Amidohydrolase 169 340 9.1E-28 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS19325 1730246183805dc34be4989212c3c958 342 SUPERFAMILY SSF51556 41 340 9.32E-35 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS04180 19bbad74affa08595528a230adc65d13 919 Gene3D G3DSA:2.170.130.10 27 138 5.4E-7 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS04180 19bbad74affa08595528a230adc65d13 919 Gene3D G3DSA:2.40.170.20 139 907 8.5E-50 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS04180 19bbad74affa08595528a230adc65d13 919 SUPERFAMILY SSF56935 778 905 9.61E-31 T 28-03-2018 CJD35_RS04180 19bbad74affa08595528a230adc65d13 919 SUPERFAMILY SSF56935 265 674 9.61E-31 T 28-03-2018 CJD35_RS04180 19bbad74affa08595528a230adc65d13 919 SUPERFAMILY SSF56935 35 198 9.61E-31 T 28-03-2018 CJD35_RS12150 bc87aa773c6e475bbda58324a5628b09 75 PRINTS PR00124 ATP synthase C subunit signature 9 28 1.6E-15 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12150 bc87aa773c6e475bbda58324a5628b09 75 PRINTS PR00124 ATP synthase C subunit signature 47 72 1.6E-15 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12150 bc87aa773c6e475bbda58324a5628b09 75 PRINTS PR00124 ATP synthase C subunit signature 30 45 1.6E-15 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12150 bc87aa773c6e475bbda58324a5628b09 75 Pfam PF00137 ATP synthase subunit C 9 71 1.5E-9 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CJD35_RS12150 bc87aa773c6e475bbda58324a5628b09 75 SUPERFAMILY SSF81333 5 73 3.92E-14 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CJD35_RS12150 bc87aa773c6e475bbda58324a5628b09 75 Gene3D G3DSA:1.20.20.10 3 74 7.5E-15 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CJD35_RS12150 bc87aa773c6e475bbda58324a5628b09 75 Hamap MF_01396 ATP synthase subunit c [atpH]. 4 72 13.246 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CJD35_RS12865 cbb104508dba984f48d939fad35f2752 527 Gene3D G3DSA:3.30.1490.70 335 401 5.0E-18 T 28-03-2018 CJD35_RS12865 cbb104508dba984f48d939fad35f2752 527 TIGRFAM TIGR04120 DNA_lig_bact: DNA ligase, ATP-dependent, PP_1105 family 3 526 3.6E-237 T 28-03-2018 IPR026333 ATP-dependent DNA ligase, PP_1105 family CJD35_RS12865 cbb104508dba984f48d939fad35f2752 527 SUPERFAMILY SSF50249 405 526 2.74E-32 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CJD35_RS12865 cbb104508dba984f48d939fad35f2752 527 Pfam PF04675 DNA ligase N terminus 4 155 6.4E-6 T 28-03-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 CJD35_RS12865 cbb104508dba984f48d939fad35f2752 527 Pfam PF01068 ATP dependent DNA ligase domain 221 400 1.7E-29 T 28-03-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 CJD35_RS12865 cbb104508dba984f48d939fad35f2752 527 Pfam PF04679 ATP dependent DNA ligase C terminal region 421 511 3.0E-14 T 28-03-2018 IPR012309 DNA ligase, ATP-dependent, C-terminal GO:0003910|GO:0006281|GO:0006310 CJD35_RS12865 cbb104508dba984f48d939fad35f2752 527 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 226 234 - T 28-03-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 CJD35_RS12865 cbb104508dba984f48d939fad35f2752 527 Gene3D G3DSA:1.10.3260.10 2 334 6.1E-27 T 28-03-2018 IPR012308 DNA ligase, ATP-dependent, N-terminal GO:0003677|GO:0003910|GO:0006281|GO:0006310 CJD35_RS12865 cbb104508dba984f48d939fad35f2752 527 SUPERFAMILY SSF56091 308 402 3.12E-50 T 28-03-2018 CJD35_RS12865 cbb104508dba984f48d939fad35f2752 527 SUPERFAMILY SSF56091 162 280 3.12E-50 T 28-03-2018 CJD35_RS12865 cbb104508dba984f48d939fad35f2752 527 Gene3D G3DSA:2.40.50.140 404 527 1.1E-31 T 28-03-2018 CJD35_RS10535 76fe43465d05be61ffb73677998f2e6b 81 Pfam PF00550 Phosphopantetheine attachment site 25 75 4.0E-9 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CJD35_RS10535 76fe43465d05be61ffb73677998f2e6b 81 Gene3D G3DSA:1.10.1200.10 1 80 2.8E-14 T 28-03-2018 CJD35_RS10535 76fe43465d05be61ffb73677998f2e6b 81 SUPERFAMILY SSF47336 3 78 1.07E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CJD35_RS10370 0563962a48f0e22c9d089aee0e0a6744 259 Pfam PF00902 Sec-independent protein translocase protein (TatC) 14 229 1.2E-66 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJD35_RS10370 0563962a48f0e22c9d089aee0e0a6744 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 11 38 5.1E-39 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJD35_RS10370 0563962a48f0e22c9d089aee0e0a6744 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 5.1E-39 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJD35_RS10370 0563962a48f0e22c9d089aee0e0a6744 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 162 190 5.1E-39 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJD35_RS10370 0563962a48f0e22c9d089aee0e0a6744 259 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 5.1E-39 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJD35_RS10370 0563962a48f0e22c9d089aee0e0a6744 259 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 12 234 4.0E-66 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJD35_RS10370 0563962a48f0e22c9d089aee0e0a6744 259 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 6 248 18.362 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CJD35_RS00710 7d1846c39917cc772ceb75e78e3e94f4 325 Pfam PF00535 Glycosyl transferase family 2 20 170 8.1E-15 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS00710 7d1846c39917cc772ceb75e78e3e94f4 325 SUPERFAMILY SSF53448 15 257 5.12E-32 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS00710 7d1846c39917cc772ceb75e78e3e94f4 325 Gene3D G3DSA:3.90.550.10 4 244 2.2E-27 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS03765 493c888c864ec88ac8593f055dcf4b42 498 Pfam PF13440 Polysaccharide biosynthesis protein 47 285 5.1E-8 T 28-03-2018 CJD35_RS04075 1458427f2a62ecdc04c305012340a25a 61 Pfam PF04024 PspC domain 6 56 2.2E-12 T 28-03-2018 IPR007168 Phage shock protein, PspC, N-terminal CJD35_RS07115 1b554ba0bdeb0569a4b9592969df78d7 386 TIGRFAM TIGR01365 serC_2: phosphoserine aminotransferase 21 383 1.9E-176 T 28-03-2018 IPR006271 Phosphoserine aminotransferase, Methanosarcina-type GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 CJD35_RS07115 1b554ba0bdeb0569a4b9592969df78d7 386 Pfam PF00266 Aminotransferase class-V 57 345 9.3E-9 T 28-03-2018 IPR000192 Aminotransferase class V domain CJD35_RS07115 1b554ba0bdeb0569a4b9592969df78d7 386 SUPERFAMILY SSF53383 21 381 1.55E-76 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS07115 1b554ba0bdeb0569a4b9592969df78d7 386 PIRSF PIRSF000525 14 384 1.7E-53 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CJD35_RS07115 1b554ba0bdeb0569a4b9592969df78d7 386 Gene3D G3DSA:3.40.640.10 37 272 1.6E-18 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS07115 1b554ba0bdeb0569a4b9592969df78d7 386 Gene3D G3DSA:3.90.1150.10 277 381 6.7E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS12515 0dc69b98c83a2ddb4aec208595a169d9 189 Gene3D G3DSA:3.40.50.880 1 189 2.3E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS12515 0dc69b98c83a2ddb4aec208595a169d9 189 SUPERFAMILY SSF52317 5 177 3.11E-43 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS12515 0dc69b98c83a2ddb4aec208595a169d9 189 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 175 1.6E-46 T 28-03-2018 IPR006286 Peptidase C56, PfpI CJD35_RS12515 0dc69b98c83a2ddb4aec208595a169d9 189 Pfam PF01965 DJ-1/PfpI family 6 175 1.2E-47 T 28-03-2018 IPR002818 DJ-1/PfpI CJD35_RS02120 a6ac8495c32db78bdf3690d909946ab9 202 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 197 35.464 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CJD35_RS02120 a6ac8495c32db78bdf3690d909946ab9 202 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 182 2.3E-55 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CJD35_RS02120 a6ac8495c32db78bdf3690d909946ab9 202 SUPERFAMILY SSF52016 1 189 4.71E-50 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJD35_RS02120 a6ac8495c32db78bdf3690d909946ab9 202 Gene3D G3DSA:3.20.19.10 1 171 1.2E-42 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CJD35_RS02120 a6ac8495c32db78bdf3690d909946ab9 202 Pfam PF00694 Aconitase C-terminal domain 1 117 1.1E-28 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CJD35_RS03735 02b73c4f2cc1a20406c243dd1e95bfe0 247 Gene3D G3DSA:3.40.50.1820 32 246 3.6E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS03735 02b73c4f2cc1a20406c243dd1e95bfe0 247 Pfam PF12697 Alpha/beta hydrolase family 60 181 3.6E-7 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS03735 02b73c4f2cc1a20406c243dd1e95bfe0 247 SUPERFAMILY SSF53474 54 236 1.04E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS09265 3712eb72d6375e2a40317babdc03db05 175 Pfam PF13508 Acetyltransferase (GNAT) domain 56 155 5.4E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS09265 3712eb72d6375e2a40317babdc03db05 175 SUPERFAMILY SSF55729 6 172 1.67E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS09265 3712eb72d6375e2a40317babdc03db05 175 Gene3D G3DSA:3.40.630.30 1 175 6.0E-23 T 28-03-2018 CJD35_RS17515 e2a1e7b17ade175b2210a7c3b6a11f99 165 SUPERFAMILY SSF47175 40 164 1.35E-27 T 28-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CJD35_RS17515 e2a1e7b17ade175b2210a7c3b6a11f99 165 PIRSF PIRSF000027 21 164 6.3E-28 T 28-03-2018 IPR012127 Cytochrome c prime GO:0005506|GO:0009055|GO:0020037|GO:0042597 CJD35_RS17515 e2a1e7b17ade175b2210a7c3b6a11f99 165 Pfam PF01322 Cytochrome C' 42 162 1.2E-25 T 28-03-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 CJD35_RS17515 e2a1e7b17ade175b2210a7c3b6a11f99 165 Gene3D G3DSA:1.20.120.10 38 163 4.2E-29 T 28-03-2018 CJD35_RS02230 ac9565c8ec8724a15a1f4dfb01b6b6b5 144 SUPERFAMILY SSF52172 3 115 7.97E-15 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS02230 ac9565c8ec8724a15a1f4dfb01b6b6b5 144 Gene3D G3DSA:3.40.50.2300 1 126 2.7E-13 T 28-03-2018 CJD35_RS02230 ac9565c8ec8724a15a1f4dfb01b6b6b5 144 SMART SM00448 3 110 7.5E-8 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS02230 ac9565c8ec8724a15a1f4dfb01b6b6b5 144 Pfam PF00072 Response regulator receiver domain 5 110 6.3E-9 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS11255 a6ed471cb84fc92d7ca4b2da87b1d939 343 SUPERFAMILY SSF53448 1 226 8.04E-35 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS11255 a6ed471cb84fc92d7ca4b2da87b1d939 343 Gene3D G3DSA:3.90.550.10 1 207 6.1E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS11255 a6ed471cb84fc92d7ca4b2da87b1d939 343 Pfam PF00535 Glycosyl transferase family 2 3 163 1.1E-30 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CJD35_RS16670 36a7ae884d1b0762fbd84a79999941f4 152 Pfam PF11578 Protein of unknown function (DUF3237) 14 148 1.3E-15 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS16670 36a7ae884d1b0762fbd84a79999941f4 152 Gene3D G3DSA:2.40.160.20 5 151 9.3E-23 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS09440 7fcb20b028a1e05f30191beb1daaff80 313 Gene3D G3DSA:1.20.120.330 26 127 1.7E-5 T 28-03-2018 CJD35_RS09440 7fcb20b028a1e05f30191beb1daaff80 313 SUPERFAMILY SSF48452 191 294 1.11E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS09440 7fcb20b028a1e05f30191beb1daaff80 313 Gene3D G3DSA:1.25.40.10 174 300 5.0E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS15340 e3358b6cd750549af7eb8edca58dfd48 448 Gene3D G3DSA:1.20.1250.20 233 447 1.6E-17 T 28-03-2018 CJD35_RS15340 e3358b6cd750549af7eb8edca58dfd48 448 Pfam PF07690 Major Facilitator Superfamily 42 312 8.4E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS15340 e3358b6cd750549af7eb8edca58dfd48 448 Gene3D G3DSA:1.20.1250.20 27 230 3.7E-38 T 28-03-2018 CJD35_RS15340 e3358b6cd750549af7eb8edca58dfd48 448 SUPERFAMILY SSF103473 28 441 1.96E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS15070 b78cb11a7530f334d622f019f1511547 925 Gene3D G3DSA:2.170.130.10 34 170 3.7E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15070 b78cb11a7530f334d622f019f1511547 925 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 159 9.4E-14 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS15070 b78cb11a7530f334d622f019f1511547 925 Gene3D G3DSA:2.40.170.20 181 925 7.8E-62 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15070 b78cb11a7530f334d622f019f1511547 925 SUPERFAMILY SSF56935 526 651 1.31E-81 T 28-03-2018 CJD35_RS15070 b78cb11a7530f334d622f019f1511547 925 SUPERFAMILY SSF56935 680 724 1.31E-81 T 28-03-2018 CJD35_RS15070 b78cb11a7530f334d622f019f1511547 925 SUPERFAMILY SSF56935 753 925 1.31E-81 T 28-03-2018 CJD35_RS15070 b78cb11a7530f334d622f019f1511547 925 SUPERFAMILY SSF56935 423 485 1.31E-81 T 28-03-2018 CJD35_RS15070 b78cb11a7530f334d622f019f1511547 925 SUPERFAMILY SSF56935 32 392 1.31E-81 T 28-03-2018 CJD35_RS15070 b78cb11a7530f334d622f019f1511547 925 TIGRFAM TIGR01782 TonB-Xanth-Caul: TonB-dependent receptor 41 925 1.1E-164 T 28-03-2018 IPR010104 Bacterial TonB-dependent receptor CJD35_RS05045 eac3aaddc967a44763b611770a840960 242 SUPERFAMILY SSF56801 19 227 9.16E-16 T 28-03-2018 CJD35_RS18140 163351b49d08187e01763c9ef38df145 160 PIRSF PIRSF019239 1 160 5.8E-33 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CJD35_RS18140 163351b49d08187e01763c9ef38df145 160 Pfam PF01899 Na+/H+ ion antiporter subunit 13 158 4.2E-38 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CJD35_RS21260 163351b49d08187e01763c9ef38df145 160 PIRSF PIRSF019239 1 160 5.8E-33 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CJD35_RS21260 163351b49d08187e01763c9ef38df145 160 Pfam PF01899 Na+/H+ ion antiporter subunit 13 158 4.2E-38 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 CJD35_RS18665 a5d6881df6fbb9da3a790e0040ac54e5 212 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 2 207 2.0E-53 T 28-03-2018 IPR006214 Bax inhibitor 1-related CJD35_RS06035 305d8a708dee1b38eab926197d57b8d4 314 Gene3D G3DSA:1.10.10.60 245 297 2.8E-6 T 28-03-2018 CJD35_RS06035 305d8a708dee1b38eab926197d57b8d4 314 Pfam PF12833 Helix-turn-helix domain 210 287 4.9E-14 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS06035 305d8a708dee1b38eab926197d57b8d4 314 SMART SM00342 204 287 1.3E-8 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CJD35_RS06035 305d8a708dee1b38eab926197d57b8d4 314 Gene3D G3DSA:1.10.10.60 153 244 1.9E-5 T 28-03-2018 CJD35_RS05890 f85279b5aeced84259ade03a6772dcef 175 Pfam PF03981 Ubiquinol-cytochrome C chaperone 43 173 6.5E-22 T 28-03-2018 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 CJD35_RS06340 7a331443839fa9b15070c9d4e9baa09c 198 Pfam PF13577 SnoaL-like domain 46 163 1.3E-18 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS06340 7a331443839fa9b15070c9d4e9baa09c 198 SUPERFAMILY SSF54427 46 170 9.34E-26 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS06340 7a331443839fa9b15070c9d4e9baa09c 198 Gene3D G3DSA:3.10.450.50 42 170 5.4E-25 T 28-03-2018 CJD35_RS04660 f3440d941877efbe16af28a1e7779b7e 138 SUPERFAMILY SSF82649 6 136 1.41E-35 T 28-03-2018 CJD35_RS04660 f3440d941877efbe16af28a1e7779b7e 138 Gene3D G3DSA:3.90.1010.10 1 136 1.3E-38 T 28-03-2018 CJD35_RS04660 f3440d941877efbe16af28a1e7779b7e 138 Pfam PF02657 Fe-S metabolism associated domain 15 130 3.9E-33 T 28-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CJD35_RS07855 f88a413da5901ce3a4fb56a486cc310b 537 Gene3D G3DSA:1.10.287.950 302 535 1.7E-34 T 28-03-2018 CJD35_RS07855 f88a413da5901ce3a4fb56a486cc310b 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 3.4E-17 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS07855 f88a413da5901ce3a4fb56a486cc310b 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 301 330 3.4E-17 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS07855 f88a413da5901ce3a4fb56a486cc310b 537 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 3.4E-17 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CJD35_RS07855 f88a413da5901ce3a4fb56a486cc310b 537 SUPERFAMILY SSF58104 255 519 9.42E-41 T 28-03-2018 CJD35_RS07855 f88a413da5901ce3a4fb56a486cc310b 537 SMART SM00283 280 531 6.3E-22 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS07855 f88a413da5901ce3a4fb56a486cc310b 537 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 463 2.2E-27 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CJD35_RS07460 29cfdd00126710a1bcef2de748a99d91 97 Pfam PF13453 Transcription factor zinc-finger 12 51 2.5E-20 T 28-03-2018 IPR027392 Transcription factor zinc-finger CJD35_RS05955 e0d5bdf7f79d074a8bc319dd85e1b452 320 Gene3D G3DSA:1.10.287.1060 213 308 1.6E-4 T 28-03-2018 CJD35_RS05955 e0d5bdf7f79d074a8bc319dd85e1b452 320 Pfam PF02470 MlaD protein 38 112 2.3E-9 T 28-03-2018 IPR003399 Mce/MlaD CJD35_RS17010 9e722fdb7147273663b2aabdc6f6ca58 406 Gene3D G3DSA:2.40.160.10 29 406 1.8E-59 T 28-03-2018 CJD35_RS17010 9e722fdb7147273663b2aabdc6f6ca58 406 Pfam PF13372 Alginate export 33 285 5.6E-10 T 28-03-2018 IPR025388 Alginate export domain CJD35_RS13130 a6d1fc3364d67354f827b1406f6d0f63 265 Pfam PF00459 Inositol monophosphatase family 12 252 2.7E-39 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS13130 a6d1fc3364d67354f827b1406f6d0f63 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 3.9E-17 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS13130 a6d1fc3364d67354f827b1406f6d0f63 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 3.9E-17 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS13130 a6d1fc3364d67354f827b1406f6d0f63 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 3.9E-17 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS13130 a6d1fc3364d67354f827b1406f6d0f63 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 88 104 3.9E-17 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CJD35_RS13130 a6d1fc3364d67354f827b1406f6d0f63 265 SUPERFAMILY SSF56655 11 263 4.32E-54 T 28-03-2018 CJD35_RS13130 a6d1fc3364d67354f827b1406f6d0f63 265 Gene3D G3DSA:3.40.190.80 154 264 5.3E-12 T 28-03-2018 CJD35_RS13130 a6d1fc3364d67354f827b1406f6d0f63 265 Gene3D G3DSA:3.30.540.10 1 153 1.1E-31 T 28-03-2018 CJD35_RS07985 6f2f9fef884632cffe7d112dfe33524d 336 SMART SM00354 1 71 2.2E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS07985 6f2f9fef884632cffe7d112dfe33524d 336 Gene3D G3DSA:1.10.260.40 2 54 1.2E-22 T 28-03-2018 CJD35_RS07985 6f2f9fef884632cffe7d112dfe33524d 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CJD35_RS07985 6f2f9fef884632cffe7d112dfe33524d 336 SUPERFAMILY SSF47413 2 59 1.3E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CJD35_RS07985 6f2f9fef884632cffe7d112dfe33524d 336 SUPERFAMILY SSF53822 62 326 1.85E-61 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CJD35_RS07985 6f2f9fef884632cffe7d112dfe33524d 336 Pfam PF13377 Periplasmic binding protein-like domain 168 323 1.0E-31 T 28-03-2018 CJD35_RS07985 6f2f9fef884632cffe7d112dfe33524d 336 Gene3D G3DSA:3.40.50.2300 176 301 7.7E-43 T 28-03-2018 CJD35_RS07985 6f2f9fef884632cffe7d112dfe33524d 336 Gene3D G3DSA:3.40.50.2300 55 175 1.0E-17 T 28-03-2018 CJD35_RS07985 6f2f9fef884632cffe7d112dfe33524d 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.0E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS07985 6f2f9fef884632cffe7d112dfe33524d 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.0E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS07985 6f2f9fef884632cffe7d112dfe33524d 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.9E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CJD35_RS14785 958c6ad8a0ed5cb58503fa79281ca7b0 677 SUPERFAMILY SSF53300 611 670 3.85E-13 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS14785 958c6ad8a0ed5cb58503fa79281ca7b0 677 SUPERFAMILY SSF53300 143 218 3.85E-13 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS14785 958c6ad8a0ed5cb58503fa79281ca7b0 677 SUPERFAMILY SSF53300 506 575 3.85E-13 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS14785 958c6ad8a0ed5cb58503fa79281ca7b0 677 Gene3D G3DSA:3.40.50.410 145 674 1.9E-29 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS14785 958c6ad8a0ed5cb58503fa79281ca7b0 677 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 27 71 4.1E-13 T 28-03-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal CJD35_RS14580 012f9ad144f4956a57d6e9f1c7d8f0a1 145 Pfam PF02502 Ribose/Galactose Isomerase 3 140 5.3E-50 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CJD35_RS14580 012f9ad144f4956a57d6e9f1c7d8f0a1 145 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 142 6.8E-47 T 28-03-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CJD35_RS14580 012f9ad144f4956a57d6e9f1c7d8f0a1 145 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 142 1.2E-47 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CJD35_RS14580 012f9ad144f4956a57d6e9f1c7d8f0a1 145 SUPERFAMILY SSF89623 1 142 1.7E-53 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CJD35_RS14580 012f9ad144f4956a57d6e9f1c7d8f0a1 145 Gene3D G3DSA:3.40.1400.10 1 144 6.8E-61 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CJD35_RS14580 012f9ad144f4956a57d6e9f1c7d8f0a1 145 PIRSF PIRSF005384 1 144 1.1E-53 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CJD35_RS03390 546e6b6a6334f59be2047a5bedc92c14 151 SUPERFAMILY SSF50891 12 150 4.24E-47 T 28-03-2018 IPR029000 Cyclophilin-like domain CJD35_RS03390 546e6b6a6334f59be2047a5bedc92c14 151 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 7 149 3.5E-45 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS03390 546e6b6a6334f59be2047a5bedc92c14 151 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 41 58 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CJD35_RS03390 546e6b6a6334f59be2047a5bedc92c14 151 Gene3D G3DSA:2.40.100.10 2 150 9.1E-48 T 28-03-2018 IPR029000 Cyclophilin-like domain CJD35_RS03390 546e6b6a6334f59be2047a5bedc92c14 151 PIRSF PIRSF001467 3 150 2.2E-29 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CJD35_RS03390 546e6b6a6334f59be2047a5bedc92c14 151 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 58 9.3E-12 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS03390 546e6b6a6334f59be2047a5bedc92c14 151 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 102 114 9.3E-12 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS03390 546e6b6a6334f59be2047a5bedc92c14 151 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 115 130 9.3E-12 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CJD35_RS01480 132fca142cc735b3efa725aedba35c22 159 Gene3D G3DSA:3.10.129.10 1 159 6.1E-52 T 28-03-2018 CJD35_RS01480 132fca142cc735b3efa725aedba35c22 159 Pfam PF07977 FabA-like domain 23 147 2.7E-36 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CJD35_RS01480 132fca142cc735b3efa725aedba35c22 159 SUPERFAMILY SSF54637 12 156 1.3E-45 T 28-03-2018 IPR029069 HotDog domain CJD35_RS01480 132fca142cc735b3efa725aedba35c22 159 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 14 153 7.2E-58 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CJD35_RS01480 132fca142cc735b3efa725aedba35c22 159 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 14 155 33.45 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CJD35_RS10565 adcc75437203726e1e4ea35191e1f740 94 Pfam PF01817 Chorismate mutase type II 11 86 9.7E-20 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CJD35_RS10565 adcc75437203726e1e4ea35191e1f740 94 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 4 92 3.7E-41 T 28-03-2018 IPR010951 Chorismate mutase, bacteria CJD35_RS10565 adcc75437203726e1e4ea35191e1f740 94 SMART SM00830 11 91 1.1E-23 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CJD35_RS10565 adcc75437203726e1e4ea35191e1f740 94 Gene3D G3DSA:1.20.59.10 1 94 1.2E-25 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CJD35_RS10565 adcc75437203726e1e4ea35191e1f740 94 SUPERFAMILY SSF48600 2 90 1.98E-25 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CJD35_RS20255 d22eba5ff2a8aa24cfdd4374deb9afad 146 Pfam PF14081 Domain of unknown function (DUF4262) 17 138 1.4E-15 T 28-03-2018 IPR025358 Protein of unknown function DUF4262 CJD35_RS16165 f004db8c73ee17f9be5052e6f13cb847 204 PRINTS PR01549 Autoinducer synthesis protein signature 95 107 2.5E-15 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS16165 f004db8c73ee17f9be5052e6f13cb847 204 PRINTS PR01549 Autoinducer synthesis protein signature 139 160 2.5E-15 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS16165 f004db8c73ee17f9be5052e6f13cb847 204 PRINTS PR01549 Autoinducer synthesis protein signature 18 37 2.5E-15 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS16165 f004db8c73ee17f9be5052e6f13cb847 204 PRINTS PR01549 Autoinducer synthesis protein signature 63 81 2.5E-15 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS16165 f004db8c73ee17f9be5052e6f13cb847 204 PRINTS PR01549 Autoinducer synthesis protein signature 39 61 2.5E-15 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS16165 f004db8c73ee17f9be5052e6f13cb847 204 Gene3D G3DSA:3.40.630.30 1 200 8.0E-30 T 28-03-2018 CJD35_RS16165 f004db8c73ee17f9be5052e6f13cb847 204 SUPERFAMILY SSF55729 4 186 8.34E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS16165 f004db8c73ee17f9be5052e6f13cb847 204 Pfam PF00765 Autoinducer synthase 10 165 1.9E-25 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CJD35_RS12180 b9d16d1c9c39631d138448329ab73282 139 Gene3D G3DSA:1.20.120.520 1 134 4.3E-7 T 28-03-2018 CJD35_RS14015 cabbcad6fda0a0a6dac4c6a10f9597a3 327 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 215 309 6.5E-12 T 28-03-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 CJD35_RS14015 cabbcad6fda0a0a6dac4c6a10f9597a3 327 SMART SM00702 134 309 2.5E-25 T 28-03-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 CJD35_RS14015 cabbcad6fda0a0a6dac4c6a10f9597a3 327 Gene3D G3DSA:2.60.120.620 130 314 4.1E-26 T 28-03-2018 CJD35_RS02160 66376fbfa41c1386f418ba4b6c3a9fd9 153 SUPERFAMILY SSF55961 5 150 2.87E-36 T 28-03-2018 CJD35_RS02160 66376fbfa41c1386f418ba4b6c3a9fd9 153 Gene3D G3DSA:3.30.530.20 4 153 5.0E-28 T 28-03-2018 IPR023393 START-like domain CJD35_RS02160 66376fbfa41c1386f418ba4b6c3a9fd9 153 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 15 149 1.0E-21 T 28-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 CJD35_RS09940 a5c0f0b0089fcd315f03267a084897b0 108 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 103 1.8E-18 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CJD35_RS09940 a5c0f0b0089fcd315f03267a084897b0 108 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 89 106 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CJD35_RS09940 a5c0f0b0089fcd315f03267a084897b0 108 SUPERFAMILY SSF89360 4 97 9.22E-28 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CJD35_RS09940 a5c0f0b0089fcd315f03267a084897b0 108 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 4 108 1.5E-34 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CJD35_RS09940 a5c0f0b0089fcd315f03267a084897b0 108 Gene3D G3DSA:2.60.300.12 4 108 9.8E-35 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CJD35_RS03890 7abb34c6d8170b6856acc3ce6b58b3ce 221 TIGRFAM TIGR02396 diverge_rpsU: rpsU-divergently transcribed protein 21 198 8.9E-45 T 28-03-2018 IPR012762 Ubiquinone biosynthesis protein COQ9 GO:0006744 Reactome: R-HSA-2142789 CJD35_RS03890 7abb34c6d8170b6856acc3ce6b58b3ce 221 Pfam PF08511 COQ9 118 193 9.1E-28 T 28-03-2018 IPR013718 COQ9 Reactome: R-HSA-2142789 CJD35_RS10530 c66ebf0e48fb4e8237c7fde587d4f7b9 408 Gene3D G3DSA:3.40.640.10 68 288 9.4E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS10530 c66ebf0e48fb4e8237c7fde587d4f7b9 408 SUPERFAMILY SSF53383 15 402 5.38E-100 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS10530 c66ebf0e48fb4e8237c7fde587d4f7b9 408 Pfam PF00155 Aminotransferase class I and II 53 394 6.6E-57 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJD35_RS10530 c66ebf0e48fb4e8237c7fde587d4f7b9 408 Gene3D G3DSA:3.90.1150.10 289 407 9.6E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS10530 c66ebf0e48fb4e8237c7fde587d4f7b9 408 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 250 259 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CJD35_RS01755 78b7e797b61eabedd954a2ae80ed4327 336 ProSitePatterns PS00534 Ferrochelatase signature. 200 218 - T 28-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CJD35_RS01755 78b7e797b61eabedd954a2ae80ed4327 336 Pfam PF00762 Ferrochelatase 14 323 2.0E-102 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CJD35_RS01755 78b7e797b61eabedd954a2ae80ed4327 336 TIGRFAM TIGR00109 hemH: ferrochelatase 13 317 5.5E-78 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CJD35_RS01755 78b7e797b61eabedd954a2ae80ed4327 336 SUPERFAMILY SSF53800 13 333 4.58E-98 T 28-03-2018 CJD35_RS01755 78b7e797b61eabedd954a2ae80ed4327 336 Hamap MF_00323 Ferrochelatase [hemH]. 13 328 34.82 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CJD35_RS01755 78b7e797b61eabedd954a2ae80ed4327 336 Gene3D G3DSA:3.40.50.1400 10 182 3.6E-46 T 28-03-2018 CJD35_RS01755 78b7e797b61eabedd954a2ae80ed4327 336 Gene3D G3DSA:3.40.50.1400 183 308 9.2E-37 T 28-03-2018 CJD35_RS06610 99469497199617e9a5c382eaa9fa8419 339 Pfam PF13469 Sulfotransferase family 1 203 5.7E-34 T 28-03-2018 CJD35_RS06610 99469497199617e9a5c382eaa9fa8419 339 SUPERFAMILY SSF52540 88 263 3.72E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06610 99469497199617e9a5c382eaa9fa8419 339 SUPERFAMILY SSF52540 1 49 3.72E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06610 99469497199617e9a5c382eaa9fa8419 339 Gene3D G3DSA:3.40.50.300 1 247 2.2E-32 T 28-03-2018 CJD35_RS18985 ee47494787d349678fc26b31ddfada46 435 Pfam PF03600 Citrate transporter 255 426 3.7E-12 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CJD35_RS18985 ee47494787d349678fc26b31ddfada46 435 Pfam PF03600 Citrate transporter 18 197 2.3E-20 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CJD35_RS17120 d46fac6b230f66b6a4d661b69b332673 437 Pfam PF07690 Major Facilitator Superfamily 29 389 1.0E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS17120 d46fac6b230f66b6a4d661b69b332673 437 Gene3D G3DSA:1.20.1250.20 14 223 3.5E-31 T 28-03-2018 CJD35_RS17120 d46fac6b230f66b6a4d661b69b332673 437 SUPERFAMILY SSF103473 11 431 4.32E-74 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS17120 d46fac6b230f66b6a4d661b69b332673 437 Gene3D G3DSA:1.20.1250.20 236 431 2.3E-20 T 28-03-2018 CJD35_RS20535 b46ac0939adda28313b7e8843cbce845 62 Pfam PF01526 Tn3 transposase DDE domain 1 62 2.1E-22 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS22275 9597af9434078dac771b64cff150163e 232 SUPERFAMILY SSF52540 3 225 5.71E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS22275 9597af9434078dac771b64cff150163e 232 PIRSF PIRSF009320 1 226 1.1E-39 T 28-03-2018 CJD35_RS22275 9597af9434078dac771b64cff150163e 232 Pfam PF07015 VirC1 protein 4 182 7.6E-16 T 28-03-2018 IPR009744 VirC1 CJD35_RS22275 9597af9434078dac771b64cff150163e 232 Gene3D G3DSA:3.40.50.300 4 227 8.8E-31 T 28-03-2018 CJD35_RS04370 c867daeca6162e991ddc24ebe3c91fb1 163 PIRSF PIRSF005900 1 162 1.3E-45 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJD35_RS04370 c867daeca6162e991ddc24ebe3c91fb1 163 Pfam PF00210 Ferritin-like domain 22 156 1.4E-22 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CJD35_RS04370 c867daeca6162e991ddc24ebe3c91fb1 163 Gene3D G3DSA:1.20.1260.10 2 159 2.5E-37 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS04370 c867daeca6162e991ddc24ebe3c91fb1 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 138 156 3.6E-6 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJD35_RS04370 c867daeca6162e991ddc24ebe3c91fb1 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 66 82 3.6E-6 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJD35_RS04370 c867daeca6162e991ddc24ebe3c91fb1 163 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 42 58 3.6E-6 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CJD35_RS04370 c867daeca6162e991ddc24ebe3c91fb1 163 SUPERFAMILY SSF47240 6 158 1.01E-40 T 28-03-2018 IPR009078 Ferritin-like superfamily CJD35_RS16575 7671eda5241ea05439cdc4eb76e1bbbf 496 SUPERFAMILY SSF53720 16 493 5.89E-150 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS16575 7671eda5241ea05439cdc4eb76e1bbbf 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS16575 7671eda5241ea05439cdc4eb76e1bbbf 496 Gene3D G3DSA:3.40.309.10 282 478 1.0E-61 T 28-03-2018 CJD35_RS16575 7671eda5241ea05439cdc4eb76e1bbbf 496 Gene3D G3DSA:3.40.605.10 15 281 1.4E-87 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS16575 7671eda5241ea05439cdc4eb76e1bbbf 496 Pfam PF00171 Aldehyde dehydrogenase family 34 490 4.4E-149 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS05705 e5a5bf5caf9255c95bb78d26c2ddebe9 117 Pfam PF07372 Protein of unknown function (DUF1491) 11 111 1.5E-25 T 28-03-2018 IPR009964 Protein of unknown function DUF1491 CJD35_RS01745 a71e46964d83c73c621d11126af01519 99 Pfam PF13467 Ribbon-helix-helix domain 23 87 2.1E-24 T 28-03-2018 IPR027373 Ribbon-helix-helix domain CJD35_RS01745 a71e46964d83c73c621d11126af01519 99 Gene3D G3DSA:1.10.3990.20 20 96 2.9E-23 T 28-03-2018 CJD35_RS05790 e12292f351d9129d0295f584214eca9d 167 Pfam PF04390 Lipopolysaccharide-assembly 37 157 5.3E-11 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CJD35_RS21985 a6d167f20adce776b1a167662ffe10c0 255 Gene3D G3DSA:3.40.30.10 7 88 4.4E-15 T 28-03-2018 CJD35_RS21985 a6d167f20adce776b1a167662ffe10c0 255 SUPERFAMILY SSF52833 6 80 5.06E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS21985 a6d167f20adce776b1a167662ffe10c0 255 Pfam PF00462 Glutaredoxin 14 71 5.2E-9 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CJD35_RS21985 a6d167f20adce776b1a167662ffe10c0 255 PRINTS PR00160 Glutaredoxin signature 13 31 7.9E-7 T 28-03-2018 IPR014025 Glutaredoxin subgroup CJD35_RS21985 a6d167f20adce776b1a167662ffe10c0 255 PRINTS PR00160 Glutaredoxin signature 54 67 7.9E-7 T 28-03-2018 IPR014025 Glutaredoxin subgroup CJD35_RS21985 a6d167f20adce776b1a167662ffe10c0 255 PRINTS PR00160 Glutaredoxin signature 68 81 7.9E-7 T 28-03-2018 IPR014025 Glutaredoxin subgroup CJD35_RS04175 3ab466ef619709bb146aeb407f4da69d 140 Pfam PF00072 Response regulator receiver domain 6 109 1.6E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS04175 3ab466ef619709bb146aeb407f4da69d 140 Gene3D G3DSA:3.40.50.2300 1 137 4.1E-26 T 28-03-2018 CJD35_RS04175 3ab466ef619709bb146aeb407f4da69d 140 SUPERFAMILY SSF52172 1 119 1.57E-26 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS04175 3ab466ef619709bb146aeb407f4da69d 140 SMART SM00448 4 121 2.8E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS14930 cfd013e4d4dbb0c525ccf57e31808c3a 166 Gene3D G3DSA:2.40.160.20 10 166 1.2E-49 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS14930 cfd013e4d4dbb0c525ccf57e31808c3a 166 Hamap MF_00775 UPF0311 protein . 18 166 25.784 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS14930 cfd013e4d4dbb0c525ccf57e31808c3a 166 Pfam PF11578 Protein of unknown function (DUF3237) 18 165 1.4E-40 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS06460 7df8bbd97990e33aaaa0697ccc184543 128 Gene3D G3DSA:1.10.10.10 30 128 2.4E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS06460 7df8bbd97990e33aaaa0697ccc184543 128 Pfam PF01638 HxlR-like helix-turn-helix 33 118 4.4E-24 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type CJD35_RS06460 7df8bbd97990e33aaaa0697ccc184543 128 SUPERFAMILY SSF46785 15 124 1.08E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS09930 cfafd0200add4bf7f415a78ff574a4bd 266 Pfam PF04305 Protein of unknown function (DUF455) 17 261 7.6E-92 T 28-03-2018 IPR007402 Protein of unknown function DUF455 CJD35_RS09930 cfafd0200add4bf7f415a78ff574a4bd 266 Gene3D G3DSA:1.20.1260.10 68 240 2.9E-40 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS09930 cfafd0200add4bf7f415a78ff574a4bd 266 SUPERFAMILY SSF47240 77 215 2.03E-17 T 28-03-2018 IPR009078 Ferritin-like superfamily CJD35_RS09930 cfafd0200add4bf7f415a78ff574a4bd 266 PIRSF PIRSF012318 4 266 5.9E-85 T 28-03-2018 IPR011197 Uncharacterised conserved protein UCP012318 CJD35_RS05725 c087cbe0fd784dfc697649a28b743302 217 Pfam PF02630 SCO1/SenC 44 186 1.5E-42 T 28-03-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS05725 c087cbe0fd784dfc697649a28b743302 217 SUPERFAMILY SSF52833 46 194 2.05E-47 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS05725 c087cbe0fd784dfc697649a28b743302 217 Gene3D G3DSA:3.40.30.10 33 215 1.6E-31 T 28-03-2018 CJD35_RS18295 9c73fd2dbf9d37ab8e5a0c055dbfaf1f 112 Pfam PF13591 MerR HTH family regulatory protein 2 84 5.7E-19 T 28-03-2018 CJD35_RS18295 9c73fd2dbf9d37ab8e5a0c055dbfaf1f 112 Gene3D G3DSA:1.10.1660.10 2 110 1.1E-4 T 28-03-2018 CJD35_RS21415 9c73fd2dbf9d37ab8e5a0c055dbfaf1f 112 Pfam PF13591 MerR HTH family regulatory protein 2 84 5.7E-19 T 28-03-2018 CJD35_RS21415 9c73fd2dbf9d37ab8e5a0c055dbfaf1f 112 Gene3D G3DSA:1.10.1660.10 2 110 1.1E-4 T 28-03-2018 CJD35_RS08350 39c84f8c2ff5514a5d25f0bbac950bbc 128 TIGRFAM TIGR00494 crcB: protein CrcB 7 122 7.6E-27 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CJD35_RS08350 39c84f8c2ff5514a5d25f0bbac950bbc 128 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 124 19.077 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CJD35_RS08350 39c84f8c2ff5514a5d25f0bbac950bbc 128 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 119 4.7E-22 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CJD35_RS08555 c0c40289c1c57e9b6dc990b5f812fba0 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 8 206 27.768 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS08555 c0c40289c1c57e9b6dc990b5f812fba0 207 Gene3D G3DSA:3.40.1370.10 1 146 2.0E-45 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CJD35_RS08555 c0c40289c1c57e9b6dc990b5f812fba0 207 Gene3D G3DSA:3.40.1370.10 147 204 1.1E-11 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CJD35_RS08555 c0c40289c1c57e9b6dc990b5f812fba0 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 203 2.1E-58 T 28-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CJD35_RS08555 c0c40289c1c57e9b6dc990b5f812fba0 207 SUPERFAMILY SSF52166 1 205 2.09E-64 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CJD35_RS08555 c0c40289c1c57e9b6dc990b5f812fba0 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 202 1.5E-63 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS20045 c137765ae624e1b176baecf31b981de8 136 Gene3D G3DSA:3.40.50.1010 1 136 2.8E-25 T 28-03-2018 IPR029060 PIN domain-like CJD35_RS20045 c137765ae624e1b176baecf31b981de8 136 SUPERFAMILY SSF88723 1 136 9.53E-26 T 28-03-2018 IPR029060 PIN domain-like CJD35_RS20045 c137765ae624e1b176baecf31b981de8 136 Pfam PF01850 PIN domain 3 126 3.0E-11 T 28-03-2018 IPR002716 PIN domain CJD35_RS11125 3de929cca01fce4cd0b268834f155dbf 480 Gene3D G3DSA:1.20.1600.10 18 478 7.2E-95 T 28-03-2018 CJD35_RS11125 3de929cca01fce4cd0b268834f155dbf 480 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 472 6.5E-103 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CJD35_RS11125 3de929cca01fce4cd0b268834f155dbf 480 Pfam PF02321 Outer membrane efflux protein 294 470 1.3E-20 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS11125 3de929cca01fce4cd0b268834f155dbf 480 Pfam PF02321 Outer membrane efflux protein 63 262 2.2E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS11125 3de929cca01fce4cd0b268834f155dbf 480 SUPERFAMILY SSF56954 2 475 6.28E-104 T 28-03-2018 CJD35_RS08630 6acd688370439ed2bf71dd9674d32719 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 8 117 2.5E-40 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08630 6acd688370439ed2bf71dd9674d32719 117 SUPERFAMILY SSF53137 8 115 2.62E-45 T 28-03-2018 CJD35_RS08630 6acd688370439ed2bf71dd9674d32719 117 Gene3D G3DSA:3.30.420.100 6 117 8.1E-36 T 28-03-2018 CJD35_RS08630 6acd688370439ed2bf71dd9674d32719 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 27.938 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CJD35_RS08630 6acd688370439ed2bf71dd9674d32719 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 117 5.1E-43 T 28-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS14135 dc8e0f227f882ec2f83b3f0afd27b2a6 158 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 2.6E-28 T 28-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CJD35_RS14135 dc8e0f227f882ec2f83b3f0afd27b2a6 158 Gene3D G3DSA:3.30.530.20 1 144 3.2E-37 T 28-03-2018 IPR023393 START-like domain CJD35_RS14135 dc8e0f227f882ec2f83b3f0afd27b2a6 158 SUPERFAMILY SSF55961 1 142 2.36E-36 T 28-03-2018 CJD35_RS04710 353aa734598b137a76bbc14a5551afc7 156 PIRSF PIRSF003230 11 152 2.0E-43 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CJD35_RS04710 353aa734598b137a76bbc14a5551afc7 156 Gene3D G3DSA:3.10.129.10 15 154 4.7E-30 T 28-03-2018 CJD35_RS04710 353aa734598b137a76bbc14a5551afc7 156 SUPERFAMILY SSF54637 19 147 1.25E-32 T 28-03-2018 IPR029069 HotDog domain CJD35_RS04710 353aa734598b137a76bbc14a5551afc7 156 Pfam PF03061 Thioesterase superfamily 35 118 1.4E-16 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CJD35_RS04710 353aa734598b137a76bbc14a5551afc7 156 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 23 126 4.6E-26 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CJD35_RS20585 054f9f9948b6917e7f9b0329c5f88091 138 Gene3D G3DSA:1.10.287.910 33 91 1.1E-4 T 28-03-2018 CJD35_RS20585 054f9f9948b6917e7f9b0329c5f88091 138 Pfam PF02411 MerT mercuric transport protein 34 124 3.7E-8 T 28-03-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 CJD35_RS05950 567c4d31c6eed4332305f9697e996951 203 Gene3D G3DSA:3.40.50.10610 18 203 7.6E-29 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CJD35_RS05950 567c4d31c6eed4332305f9697e996951 203 SUPERFAMILY SSF159594 44 201 6.54E-28 T 28-03-2018 CJD35_RS05950 567c4d31c6eed4332305f9697e996951 203 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 50 176 2.5E-12 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CJD35_RS07015 0114693295e8796b4e3127e2b5a6bc98 354 Gene3D G3DSA:2.120.10.30 30 354 1.0E-55 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS07015 0114693295e8796b4e3127e2b5a6bc98 354 SUPERFAMILY SSF50956 33 353 1.19E-70 T 28-03-2018 CJD35_RS07015 0114693295e8796b4e3127e2b5a6bc98 354 Pfam PF02333 Phytase 23 353 2.2E-72 T 28-03-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 CJD35_RS10115 4c3ad6d42b2b4372038645d1f7ee4137 498 Gene3D G3DSA:3.30.750.24 408 498 1.1E-4 T 28-03-2018 IPR002645 STAS domain CJD35_RS10115 4c3ad6d42b2b4372038645d1f7ee4137 498 SUPERFAMILY SSF52091 414 496 9.42E-6 T 28-03-2018 IPR002645 STAS domain CJD35_RS10115 4c3ad6d42b2b4372038645d1f7ee4137 498 Pfam PF00916 Sulfate permease family 10 379 1.1E-61 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CJD35_RS08190 fcab5ee1fa483062dd44f8588678a715 332 Pfam PF01384 Phosphate transporter family 23 321 6.3E-90 T 28-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CJD35_RS14355 94ffa1e86589786c26d80618161e5b71 890 Gene3D G3DSA:1.20.5.50 356 467 0.028 T 28-03-2018 CJD35_RS14355 94ffa1e86589786c26d80618161e5b71 890 Gene3D G3DSA:3.90.20.10 126 333 0.0026 T 28-03-2018 CJD35_RS14355 94ffa1e86589786c26d80618161e5b71 890 Gene3D G3DSA:1.20.120.20 706 889 0.15 T 28-03-2018 CJD35_RS14355 94ffa1e86589786c26d80618161e5b71 890 Gene3D G3DSA:3.90.20.10 468 705 5.5E-7 T 28-03-2018 CJD35_RS15625 c3dae796ed09591f425a830adf0adbcb 284 Pfam PF12697 Alpha/beta hydrolase family 36 272 7.7E-13 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS15625 c3dae796ed09591f425a830adf0adbcb 284 Gene3D G3DSA:3.40.50.1820 13 279 3.1E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS15625 c3dae796ed09591f425a830adf0adbcb 284 SUPERFAMILY SSF53474 15 277 9.23E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS16685 7d790b19478e6fac5a278f1d2139490c 305 Gene3D G3DSA:2.40.128.130 93 303 6.3E-5 T 28-03-2018 CJD35_RS16685 7d790b19478e6fac5a278f1d2139490c 305 Pfam PF05275 Copper resistance protein B precursor (CopB) 99 305 2.9E-91 T 28-03-2018 IPR007939 Copper resistance B precursor GO:0005507|GO:0006878|GO:0009279 CJD35_RS16685 7d790b19478e6fac5a278f1d2139490c 305 SUPERFAMILY SSF103515 209 297 5.62E-5 T 28-03-2018 IPR005546 Autotransporter beta-domain CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 SUPERFAMILY SSF55961 168 387 1.88E-33 T 28-03-2018 CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 Gene3D G3DSA:3.90.380.10 159 389 6.6E-43 T 28-03-2018 CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 SUPERFAMILY SSF50022 30 168 5.5E-44 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 189 380 1.8E-18 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 Pfam PF00355 Rieske [2Fe-2S] domain 55 140 8.4E-16 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 39 64 2.9E-24 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 90 110 2.9E-24 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 2.9E-24 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 189 211 2.9E-24 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 111 131 2.9E-24 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 97 120 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CJD35_RS15785 7509e70120b953c6b25bd77b21452c7a 404 Gene3D G3DSA:2.102.10.10 52 158 6.0E-24 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS14950 1aa17720c6b6f963307adf7641542c3c 367 Pfam PF04116 Fatty acid hydroxylase superfamily 159 307 5.1E-23 T 28-03-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 CJD35_RS04820 2472cc403433cb7a751340495f0fe58f 448 Pfam PF01523 Putative modulator of DNA gyrase 26 317 7.5E-54 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CJD35_RS04820 2472cc403433cb7a751340495f0fe58f 448 SUPERFAMILY SSF111283 6 447 1.57E-122 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CJD35_RS04820 2472cc403433cb7a751340495f0fe58f 448 Gene3D G3DSA:3.30.2290.10 1 226 2.2E-51 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CJD35_RS11320 de8be3370132c6c1b93ccf0174ece995 252 Pfam PF09608 Putative transmembrane protein (Alph_Pro_TM) 22 251 1.7E-80 T 28-03-2018 IPR019088 Conserved hypothetical protein CHP02186-related, transmembrane CJD35_RS21610 683d37613a9dd4ef2b4bb930932e1297 140 Pfam PF03960 ArsC family 6 113 1.0E-17 T 28-03-2018 IPR006660 Arsenate reductase-like CJD35_RS21610 683d37613a9dd4ef2b4bb930932e1297 140 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 115 3.3E-41 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CJD35_RS21610 683d37613a9dd4ef2b4bb930932e1297 140 Gene3D G3DSA:3.40.30.10 1 140 1.0E-40 T 28-03-2018 CJD35_RS21610 683d37613a9dd4ef2b4bb930932e1297 140 SUPERFAMILY SSF52833 2 137 1.64E-37 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS17485 1d518d6283a0b912baf1e5de659df3ca 366 Gene3D G3DSA:3.40.50.1580 68 341 8.4E-13 T 28-03-2018 CJD35_RS17485 1d518d6283a0b912baf1e5de659df3ca 366 Pfam PF06516 Purine nucleoside permease (NUP) 46 365 1.8E-118 T 28-03-2018 IPR009486 Purine nucleoside permease GO:0055085 CJD35_RS17485 1d518d6283a0b912baf1e5de659df3ca 366 PIRSF PIRSF013171 15 366 7.1E-101 T 28-03-2018 IPR009486 Purine nucleoside permease GO:0055085 CJD35_RS01310 ff276a9342723614dae91ca007574d28 264 Gene3D G3DSA:3.90.79.10 1 220 1.2E-24 T 28-03-2018 CJD35_RS01310 ff276a9342723614dae91ca007574d28 264 SUPERFAMILY SSF55811 132 197 2.71E-16 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJD35_RS01310 ff276a9342723614dae91ca007574d28 264 SUPERFAMILY SSF55811 9 86 2.71E-16 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJD35_RS01355 e1ec18cb04fd77660e8052e4ed81017c 342 SUPERFAMILY SSF111337 1 341 3.92E-123 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CJD35_RS01355 e1ec18cb04fd77660e8052e4ed81017c 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 1.7E-106 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CJD35_RS01355 e1ec18cb04fd77660e8052e4ed81017c 342 Pfam PF02547 Queuosine biosynthesis protein 4 340 2.1E-121 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CJD35_RS01355 e1ec18cb04fd77660e8052e4ed81017c 342 Gene3D G3DSA:3.40.1780.10 173 341 4.9E-65 T 28-03-2018 CJD35_RS01355 e1ec18cb04fd77660e8052e4ed81017c 342 Gene3D G3DSA:3.40.1780.10 1 123 1.1E-24 T 28-03-2018 CJD35_RS01355 e1ec18cb04fd77660e8052e4ed81017c 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 43.073 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CJD35_RS02415 a3b3e96320fa77f63611ee13051d407a 222 Pfam PF00717 Peptidase S24-like 134 199 7.1E-8 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS02415 a3b3e96320fa77f63611ee13051d407a 222 Gene3D G3DSA:2.10.109.10 95 221 2.0E-20 T 28-03-2018 CJD35_RS02415 a3b3e96320fa77f63611ee13051d407a 222 SUPERFAMILY SSF51306 87 219 1.1E-18 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CJD35_RS02415 a3b3e96320fa77f63611ee13051d407a 222 ProSitePatterns PS00501 Signal peptidases I serine active site. 137 144 - T 28-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CJD35_RS13385 cca61039cadf84c23b94477c029bd6ed 275 SUPERFAMILY SSF55920 23 269 6.28E-88 T 28-03-2018 IPR000994 Peptidase M24 CJD35_RS13385 cca61039cadf84c23b94477c029bd6ed 275 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 19 264 3.4E-88 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CJD35_RS13385 cca61039cadf84c23b94477c029bd6ed 275 Hamap MF_01974 Methionine aminopeptidase [map]. 19 265 39.377 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CJD35_RS13385 cca61039cadf84c23b94477c029bd6ed 275 Pfam PF00557 Metallopeptidase family M24 28 256 1.8E-52 T 28-03-2018 IPR000994 Peptidase M24 CJD35_RS13385 cca61039cadf84c23b94477c029bd6ed 275 Gene3D G3DSA:3.90.230.10 4 272 1.6E-85 T 28-03-2018 CJD35_RS13385 cca61039cadf84c23b94477c029bd6ed 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 106 122 9.0E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CJD35_RS13385 cca61039cadf84c23b94477c029bd6ed 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 176 188 9.0E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CJD35_RS13385 cca61039cadf84c23b94477c029bd6ed 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 219 9.0E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CJD35_RS13385 cca61039cadf84c23b94477c029bd6ed 275 PRINTS PR00599 Methionine aminopeptidase-1 signature 84 97 9.0E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CJD35_RS05470 698d00adf1bb4b2fc85da68f04c1745e 355 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 10 339 2.2E-131 T 28-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CJD35_RS05470 698d00adf1bb4b2fc85da68f04c1745e 355 PIRSF PIRSF005508 1 353 3.8E-135 T 28-03-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 CJD35_RS05470 698d00adf1bb4b2fc85da68f04c1745e 355 Pfam PF01758 Sodium Bile acid symporter family 55 251 1.7E-64 T 28-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CJD35_RS21555 f448c91b0e062daec59c6562820f3d0a 183 Pfam PF06210 Protein of unknown function (DUF1003) 64 164 3.3E-35 T 28-03-2018 IPR010406 Protein of unknown function DUF1003 CJD35_RS18435 f448c91b0e062daec59c6562820f3d0a 183 Pfam PF06210 Protein of unknown function (DUF1003) 64 164 3.3E-35 T 28-03-2018 IPR010406 Protein of unknown function DUF1003 CJD35_RS10110 dfbe1e9ecbee38d529e532479dfe51c2 232 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 83 103 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS10110 dfbe1e9ecbee38d529e532479dfe51c2 232 Pfam PF00484 Carbonic anhydrase 35 191 2.8E-48 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS10110 dfbe1e9ecbee38d529e532479dfe51c2 232 Gene3D G3DSA:3.40.1050.10 1 213 1.0E-63 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS10110 dfbe1e9ecbee38d529e532479dfe51c2 232 SMART SM00947 28 196 5.8E-62 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS10110 dfbe1e9ecbee38d529e532479dfe51c2 232 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 40 47 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS10110 dfbe1e9ecbee38d529e532479dfe51c2 232 SUPERFAMILY SSF53056 2 206 1.57E-61 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CJD35_RS22300 c54d62eadfe286e2160fb480d4af15cc 386 Pfam PF02706 Chain length determinant protein 20 108 1.1E-8 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CJD35_RS22300 c54d62eadfe286e2160fb480d4af15cc 386 Gene3D G3DSA:3.30.1890.10 42 353 9.3E-11 T 28-03-2018 CJD35_RS20000 1642f997be910846059bf8da49e1f9e9 426 Pfam PF00916 Sulfate permease family 28 380 1.2E-81 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CJD35_RS12760 3101c4737c7e5caa4cec2ff8cd3f770c 213 Gene3D G3DSA:1.25.40.10 66 203 5.5E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS12760 3101c4737c7e5caa4cec2ff8cd3f770c 213 SUPERFAMILY SSF48452 80 177 3.16E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS15415 d42444bcb2d5a719c371b0ecb5cde553 170 Gene3D G3DSA:3.10.180.10 7 148 1.6E-4 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS15415 d42444bcb2d5a719c371b0ecb5cde553 170 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 126 1.8E-9 T 28-03-2018 CJD35_RS15415 d42444bcb2d5a719c371b0ecb5cde553 170 SUPERFAMILY SSF54593 10 149 4.28E-6 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS06665 3cf285e94c3b701c22315f543a7a9012 144 Gene3D G3DSA:2.40.10.220 1 118 1.8E-6 T 28-03-2018 CJD35_RS04855 9603ea9bd0952a1fa99b990cef077280 90 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 81 1.1E-20 T 28-03-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system CJD35_RS09380 c12304d41974a0ef9b52268095141ff7 136 Pfam PF05433 Glycine zipper 2TM domain 85 132 4.4E-7 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CJD35_RS08790 7c9afba4f2aea0cbe826dd3d941eb98a 207 Pfam PF01063 Amino-transferase class IV 10 202 1.9E-29 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CJD35_RS08790 7c9afba4f2aea0cbe826dd3d941eb98a 207 SUPERFAMILY SSF56752 10 202 7.06E-34 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CJD35_RS08790 7c9afba4f2aea0cbe826dd3d941eb98a 207 Gene3D G3DSA:3.30.470.10 4 80 8.5E-15 T 28-03-2018 CJD35_RS08790 7c9afba4f2aea0cbe826dd3d941eb98a 207 Gene3D G3DSA:3.20.10.10 93 200 1.6E-23 T 28-03-2018 CJD35_RS11710 c965c9958c7a793a25cdd01d7c4e9f06 304 Pfam PF13614 AAA domain 113 247 1.5E-7 T 28-03-2018 IPR025669 AAA domain CJD35_RS11710 c965c9958c7a793a25cdd01d7c4e9f06 304 Gene3D G3DSA:3.40.50.300 83 299 1.6E-26 T 28-03-2018 CJD35_RS11710 c965c9958c7a793a25cdd01d7c4e9f06 304 SUPERFAMILY SSF52540 110 289 3.6E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01855 0a1e937fc0c614c54eccc684f5f8c913 119 Pfam PF05135 Phage gp6-like head-tail connector protein 35 102 6.6E-8 T 28-03-2018 IPR021146 Phage gp6-like head-tail connector protein CJD35_RS01855 0a1e937fc0c614c54eccc684f5f8c913 119 Gene3D G3DSA:1.10.3230.10 33 116 9.5E-4 T 28-03-2018 CJD35_RS13875 b9f1d9b55f17ce30a8a4d1e6bcd6734c 250 Pfam PF01925 Sulfite exporter TauE/SafE 12 243 9.2E-23 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CJD35_RS06080 757c6d78db38aac75809fd3a988c1899 119 Pfam PF01521 Iron-sulphur cluster biosynthesis 14 115 1.3E-19 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CJD35_RS06080 757c6d78db38aac75809fd3a988c1899 119 SUPERFAMILY SSF89360 14 108 8.44E-24 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CJD35_RS06080 757c6d78db38aac75809fd3a988c1899 119 Gene3D G3DSA:2.60.300.12 13 119 1.7E-29 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CJD35_RS06080 757c6d78db38aac75809fd3a988c1899 119 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 100 117 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CJD35_RS06080 757c6d78db38aac75809fd3a988c1899 119 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 14 119 3.8E-29 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CJD35_RS13920 661381b3529e84b61bc08eee595f46a1 286 Pfam PF01061 ABC-2 type transporter 34 248 2.5E-23 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CJD35_RS13920 661381b3529e84b61bc08eee595f46a1 286 PIRSF PIRSF006648 4 282 4.2E-17 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CJD35_RS06495 77a2053fbe120fd920cb5be6e47c1764 261 SUPERFAMILY SSF56529 3 260 3.92E-71 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS06495 77a2053fbe120fd920cb5be6e47c1764 261 Gene3D G3DSA:3.90.850.10 1 261 1.5E-41 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS06495 77a2053fbe120fd920cb5be6e47c1764 261 TIGRFAM TIGR03218 catechol_dmpH: 4-oxalocrotonate decarboxylase 6 259 4.7E-109 T 28-03-2018 IPR017630 4-oxalocrotonate decarboxylase KEGG: 00362+4.1.1.77|KEGG: 00621+4.1.1.77|KEGG: 00622+4.1.1.77|MetaCyc: PWY-5419|MetaCyc: PWY-5644|MetaCyc: PWY-5645|MetaCyc: PWY-5647|MetaCyc: PWY-5654|MetaCyc: PWY-6210|MetaCyc: PWY-6214|MetaCyc: PWY-6336|MetaCyc: PWY-7006|MetaCyc: PWY-7480 CJD35_RS10655 239ace3a1bf9c7d1dc5a59824b995668 177 Pfam PF13302 Acetyltransferase (GNAT) domain 2 129 4.9E-21 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS10655 239ace3a1bf9c7d1dc5a59824b995668 177 SUPERFAMILY SSF55729 2 134 1.17E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS10655 239ace3a1bf9c7d1dc5a59824b995668 177 Gene3D G3DSA:3.40.630.30 1 166 6.6E-21 T 28-03-2018 CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.4E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 Gene3D G3DSA:3.40.50.720 47 260 4.6E-49 T 28-03-2018 CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 Gene3D G3DSA:3.40.50.720 2 46 2.3E-8 T 28-03-2018 CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 SUPERFAMILY SSF51735 6 253 1.64E-69 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 252 1.2E-50 T 28-03-2018 CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15695 b1ba3711f3990014b0fdf5bf57aafa64 270 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.1E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS12980 8807e3154d203b7c3830af6155d1f9ce 229 Pfam PF10677 Protein of unknown function (DUF2490) 30 213 5.5E-44 T 28-03-2018 IPR019619 Protein of unknown function DUF2490 CJD35_RS13340 1a99754ed227a9a71805d775cd3ad792 231 Pfam PF13709 Domain of unknown function (DUF4159) 33 229 2.7E-54 T 28-03-2018 IPR025297 Domain of unknown function DUF4159 CJD35_RS21875 3675937484d466886855a37a635b7595 796 SUPERFAMILY SSF52540 396 722 7.2E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS21875 3675937484d466886855a37a635b7595 796 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 437 476 8.3E-5 T 28-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain CJD35_RS21875 3675937484d466886855a37a635b7595 796 Gene3D G3DSA:3.40.50.300 287 745 3.9E-22 T 28-03-2018 CJD35_RS21875 3675937484d466886855a37a635b7595 796 Pfam PF03135 CagE, TrbE, VirB family, component of type IV transporter system 186 388 6.4E-42 T 28-03-2018 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain GO:0005524 CJD35_RS21875 3675937484d466886855a37a635b7595 796 TIGRFAM TIGR00929 VirB4_CagE: type IV secretion/conjugal transfer ATPase, VirB4 family 18 792 1.2E-237 T 28-03-2018 IPR004346 CagE, TrbE, VirB component of type IV transporter system GO:0005524 CJD35_RS02250 eb6cba1dae27b0337a0b07456c795756 188 Pfam PF14279 HNH endonuclease 97 148 1.8E-14 T 28-03-2018 IPR029471 HNH endonuclease 5 CJD35_RS02250 eb6cba1dae27b0337a0b07456c795756 188 SMART SM00507 84 134 1.4E-9 T 28-03-2018 IPR003615 HNH nuclease CJD35_RS02250 eb6cba1dae27b0337a0b07456c795756 188 Gene3D G3DSA:3.40.1800.10 76 151 2.8E-18 T 28-03-2018 CJD35_RS09100 1ea15350c2c98e3df52e6ea575cd1a98 176 Gene3D G3DSA:3.90.79.10 3 173 6.3E-28 T 28-03-2018 CJD35_RS09100 1ea15350c2c98e3df52e6ea575cd1a98 176 SUPERFAMILY SSF55811 26 156 1.49E-30 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CJD35_RS09100 1ea15350c2c98e3df52e6ea575cd1a98 176 Pfam PF00293 NUDIX domain 37 158 1.5E-10 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CJD35_RS09100 1ea15350c2c98e3df52e6ea575cd1a98 176 ProSitePatterns PS00893 Nudix box signature. 72 93 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CJD35_RS08410 5faec7557846f7d343b60ee2c07c8704 87 Pfam PF07589 PEP-CTERM motif 58 81 9.3E-5 T 28-03-2018 IPR013424 PEP-CTERM protein-sorting domain CJD35_RS11055 869d6b1dd7ba50cda9f1cea7daeefb7b 334 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 6 261 2.1E-58 T 28-03-2018 IPR017592 Pilus assembly, Flp-type CpaB CJD35_RS11055 869d6b1dd7ba50cda9f1cea7daeefb7b 334 SMART SM00858 47 113 3.4E-9 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CJD35_RS11055 869d6b1dd7ba50cda9f1cea7daeefb7b 334 Pfam PF08666 SAF domain 49 111 1.1E-8 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CJD35_RS11055 869d6b1dd7ba50cda9f1cea7daeefb7b 334 Gene3D G3DSA:3.90.1210.10 45 116 4.3E-17 T 28-03-2018 CJD35_RS11055 869d6b1dd7ba50cda9f1cea7daeefb7b 334 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 119 231 2.0E-31 T 28-03-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain CJD35_RS13790 cf61e7ed4041753fb215419b7f4c40f2 135 Pfam PF01878 EVE domain 2 131 3.4E-43 T 28-03-2018 IPR002740 EVE domain CJD35_RS13790 cf61e7ed4041753fb215419b7f4c40f2 135 SUPERFAMILY SSF88697 1 134 3.73E-51 T 28-03-2018 IPR015947 PUA-like domain CJD35_RS13790 cf61e7ed4041753fb215419b7f4c40f2 135 Gene3D G3DSA:3.10.590.10 1 135 2.3E-50 T 28-03-2018 CJD35_RS21750 a3f88b9867238a30ae48fb9c454eca39 295 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 12 272 1.0E-39 T 28-03-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 CJD35_RS13740 af47124fa73bf007983c311781f1cf61 429 SUPERFAMILY SSF52266 199 414 2.75E-8 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CJD35_RS13740 af47124fa73bf007983c311781f1cf61 429 Pfam PF00657 GDSL-like Lipase/Acylhydrolase 203 411 2.9E-5 T 28-03-2018 IPR001087 GDSL lipase/esterase GO:0016788 CJD35_RS13740 af47124fa73bf007983c311781f1cf61 429 Gene3D G3DSA:3.40.50.1110 198 423 1.2E-8 T 28-03-2018 CJD35_RS18560 1e73ebbbc075f18b167450b08d4c1294 96 Pfam PF07178 TraL protein 6 94 4.5E-31 T 28-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CJD35_RS18560 1e73ebbbc075f18b167450b08d4c1294 96 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 95 2.2E-30 T 28-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CJD35_RS04270 82891c59b1d5532fd22937aa2fe3abea 189 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 31 129 4.8E-23 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CJD35_RS04270 82891c59b1d5532fd22937aa2fe3abea 189 Gene3D G3DSA:3.40.140.10 24 178 1.2E-34 T 28-03-2018 CJD35_RS04270 82891c59b1d5532fd22937aa2fe3abea 189 SUPERFAMILY SSF53927 24 165 6.02E-38 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CJD35_RS03845 def2185b6c7878a0fc162d15d8c4c7af 163 SUPERFAMILY SSF55785 43 141 5.82E-5 T 28-03-2018 IPR000014 PAS domain CJD35_RS03845 def2185b6c7878a0fc162d15d8c4c7af 163 Gene3D G3DSA:3.30.450.20 42 99 3.9E-8 T 28-03-2018 CJD35_RS07400 d3bc68ed846bda26168c3e40f15ef454 343 Pfam PF04616 Glycosyl hydrolases family 43 43 339 7.6E-54 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 CJD35_RS07400 d3bc68ed846bda26168c3e40f15ef454 343 SUPERFAMILY SSF75005 11 339 4.57E-71 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CJD35_RS07400 d3bc68ed846bda26168c3e40f15ef454 343 Gene3D G3DSA:2.115.10.20 31 343 7.0E-66 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CJD35_RS07400 d3bc68ed846bda26168c3e40f15ef454 343 PIRSF PIRSF026534 4 343 4.8E-90 T 28-03-2018 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase GO:0046558 CJD35_RS16930 08bc6151add45480d4d7f40350082119 101 Pfam PF13188 PAS domain 12 67 2.5E-10 T 28-03-2018 IPR000014 PAS domain CJD35_RS16930 08bc6151add45480d4d7f40350082119 101 SMART SM00091 11 76 8.8E-4 T 28-03-2018 IPR000014 PAS domain CJD35_RS16930 08bc6151add45480d4d7f40350082119 101 Gene3D G3DSA:3.30.450.20 7 100 3.8E-9 T 28-03-2018 CJD35_RS16930 08bc6151add45480d4d7f40350082119 101 SUPERFAMILY SSF55785 11 70 2.79E-8 T 28-03-2018 IPR000014 PAS domain CJD35_RS21315 5d61f166bbf072111afff4529c7b643c 97 SUPERFAMILY SSF54909 1 96 1.47E-26 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS21315 5d61f166bbf072111afff4529c7b643c 97 Gene3D G3DSA:3.30.70.100 2 93 2.8E-17 T 28-03-2018 CJD35_RS18195 5d61f166bbf072111afff4529c7b643c 97 SUPERFAMILY SSF54909 1 96 1.47E-26 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CJD35_RS18195 5d61f166bbf072111afff4529c7b643c 97 Gene3D G3DSA:3.30.70.100 2 93 2.8E-17 T 28-03-2018 CJD35_RS14550 35b6d441af42ca0d0effc8b44015641d 322 PRINTS PR00118 Beta-lactamase class A signature 59 83 1.7E-47 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CJD35_RS14550 35b6d441af42ca0d0effc8b44015641d 322 PRINTS PR00118 Beta-lactamase class A signature 169 193 1.7E-47 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CJD35_RS14550 35b6d441af42ca0d0effc8b44015641d 322 PRINTS PR00118 Beta-lactamase class A signature 195 220 1.7E-47 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CJD35_RS14550 35b6d441af42ca0d0effc8b44015641d 322 PRINTS PR00118 Beta-lactamase class A signature 230 245 1.7E-47 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CJD35_RS14550 35b6d441af42ca0d0effc8b44015641d 322 PRINTS PR00118 Beta-lactamase class A signature 90 107 1.7E-47 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CJD35_RS14550 35b6d441af42ca0d0effc8b44015641d 322 PRINTS PR00118 Beta-lactamase class A signature 133 158 1.7E-47 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CJD35_RS14550 35b6d441af42ca0d0effc8b44015641d 322 PRINTS PR00118 Beta-lactamase class A signature 247 262 1.7E-47 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CJD35_RS14550 35b6d441af42ca0d0effc8b44015641d 322 ProSitePatterns PS00146 Beta-lactamase class-A active site. 92 107 - T 28-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CJD35_RS14550 35b6d441af42ca0d0effc8b44015641d 322 Pfam PF13354 Beta-lactamase enzyme family 80 286 4.8E-42 T 28-03-2018 CJD35_RS14550 35b6d441af42ca0d0effc8b44015641d 322 SUPERFAMILY SSF56601 62 311 6.69E-62 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CJD35_RS14550 35b6d441af42ca0d0effc8b44015641d 322 Gene3D G3DSA:3.40.710.10 58 318 1.3E-32 T 28-03-2018 CJD35_RS14130 d6778ee2f6e345dd5f0290d676558e56 172 Pfam PF02464 Competence-damaged protein 12 166 2.3E-52 T 28-03-2018 IPR008136 CinA, C-terminal CJD35_RS14130 d6778ee2f6e345dd5f0290d676558e56 172 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 20 165 5.1E-44 T 28-03-2018 IPR008136 CinA, C-terminal CJD35_RS14130 d6778ee2f6e345dd5f0290d676558e56 172 SUPERFAMILY SSF142433 11 166 4.97E-50 T 28-03-2018 IPR008136 CinA, C-terminal CJD35_RS14130 d6778ee2f6e345dd5f0290d676558e56 172 Gene3D G3DSA:3.90.950.20 2 170 9.1E-53 T 28-03-2018 CJD35_RS08045 8c10ea22c9c00853dda5fd5705cc1a1a 757 SUPERFAMILY SSF56935 20 757 7.79E-112 T 28-03-2018 CJD35_RS08045 8c10ea22c9c00853dda5fd5705cc1a1a 757 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 740 757 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CJD35_RS08045 8c10ea22c9c00853dda5fd5705cc1a1a 757 Gene3D G3DSA:2.170.130.10 21 160 3.2E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS08045 8c10ea22c9c00853dda5fd5705cc1a1a 757 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 150 7.1E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS08045 8c10ea22c9c00853dda5fd5705cc1a1a 757 Pfam PF00593 TonB dependent receptor 263 754 3.2E-33 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS08045 8c10ea22c9c00853dda5fd5705cc1a1a 757 Gene3D G3DSA:2.40.170.20 161 757 9.2E-69 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS03350 047bd51bfa30d1385068145c3b92fb06 1194 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 5 180 3.3E-51 T 28-03-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403 CJD35_RS03350 047bd51bfa30d1385068145c3b92fb06 1194 Pfam PF01968 Hydantoinase/oxoprolinase 199 486 5.7E-108 T 28-03-2018 IPR002821 Hydantoinase/oxoprolinase GO:0016787 Reactome: R-HSA-174403 CJD35_RS03350 047bd51bfa30d1385068145c3b92fb06 1194 Pfam PF02538 Hydantoinase B/oxoprolinase 675 1190 2.0E-195 T 28-03-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403 CJD35_RS15405 06b2bbcc3a3618a84c8d1180511ed0da 397 Pfam PF06742 Protein of unknown function (DUF1214) 274 340 0.0017 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 CJD35_RS15405 06b2bbcc3a3618a84c8d1180511ed0da 397 Gene3D G3DSA:2.60.120.600 76 182 6.0E-10 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 CJD35_RS15405 06b2bbcc3a3618a84c8d1180511ed0da 397 Gene3D G3DSA:2.60.120.600 247 367 2.4E-8 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 CJD35_RS05440 b7486325ff5c8a4e8dcf5daecf686398 206 Pfam PF00565 Staphylococcal nuclease homologue 48 178 3.6E-13 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS05440 b7486325ff5c8a4e8dcf5daecf686398 206 Gene3D G3DSA:2.40.50.90 15 194 1.0E-26 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain CJD35_RS05440 b7486325ff5c8a4e8dcf5daecf686398 206 SMART SM00318 15 179 8.3E-7 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS05440 b7486325ff5c8a4e8dcf5daecf686398 206 SUPERFAMILY SSF50199 14 107 2.09E-23 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS05440 b7486325ff5c8a4e8dcf5daecf686398 206 SUPERFAMILY SSF50199 135 186 2.09E-23 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS03000 90eae7a5deb7632f6365471887f0825c 199 SUPERFAMILY SSF55729 15 169 8.02E-18 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS03000 90eae7a5deb7632f6365471887f0825c 199 Pfam PF00583 Acetyltransferase (GNAT) family 94 163 1.2E-5 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS03000 90eae7a5deb7632f6365471887f0825c 199 Gene3D G3DSA:3.40.630.30 16 179 1.2E-16 T 28-03-2018 CJD35_RS19195 43087ed716147d78b23920d4c3d007fd 617 Gene3D G3DSA:3.40.50.300 22 226 0.0011 T 28-03-2018 CJD35_RS19195 43087ed716147d78b23920d4c3d007fd 617 Pfam PF13871 C-terminal domain on Strawberry notch homologue 84 338 8.9E-84 T 28-03-2018 IPR026937 Strawberry notch, helicase C domain CJD35_RS14560 83e66873b99f4c3414381a63b64be3e1 372 Gene3D G3DSA:3.90.1150.10 249 357 1.5E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS14560 83e66873b99f4c3414381a63b64be3e1 372 Pfam PF00266 Aminotransferase class-V 12 356 9.9E-59 T 28-03-2018 IPR000192 Aminotransferase class V domain CJD35_RS14560 83e66873b99f4c3414381a63b64be3e1 372 PIRSF PIRSF005572 9 371 7.9E-102 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CJD35_RS14560 83e66873b99f4c3414381a63b64be3e1 372 Gene3D G3DSA:3.40.640.10 20 248 9.3E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS14560 83e66873b99f4c3414381a63b64be3e1 372 SUPERFAMILY SSF53383 11 365 1.99E-85 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS14560 83e66873b99f4c3414381a63b64be3e1 372 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 191 210 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CJD35_RS07395 d8d49665c019191cd7f023b92753dd44 475 Pfam PF04616 Glycosyl hydrolases family 43 37 337 7.5E-57 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 CJD35_RS07395 d8d49665c019191cd7f023b92753dd44 475 SUPERFAMILY SSF75005 37 346 3.85E-62 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CJD35_RS07395 d8d49665c019191cd7f023b92753dd44 475 Gene3D G3DSA:2.115.10.20 29 349 2.8E-59 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CJD35_RS07395 d8d49665c019191cd7f023b92753dd44 475 Gene3D G3DSA:2.80.10.50 350 475 2.9E-11 T 28-03-2018 CJD35_RS07395 d8d49665c019191cd7f023b92753dd44 475 SUPERFAMILY SSF110221 336 461 2.09E-6 T 28-03-2018 IPR007934 Alpha-L-arabinofuranosidase B, arabinose-binding domain GO:0046373|GO:0046556 CJD35_RS03220 85977c948decb98b82ea96a20fc3099c 218 Pfam PF03963 Flagellar hook capping protein - N-terminal region 17 76 1.4E-17 T 28-03-2018 IPR005648 Flagellar hook capping protein CJD35_RS03220 85977c948decb98b82ea96a20fc3099c 218 Pfam PF13860 FlgD Ig-like domain 114 177 4.3E-16 T 28-03-2018 IPR025965 FlgD Ig-like domain CJD35_RS13330 c3d4be6f7a04e9940b15c34db23221e8 544 Gene3D G3DSA:3.30.2290.10 36 284 1.3E-65 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CJD35_RS13330 c3d4be6f7a04e9940b15c34db23221e8 544 SUPERFAMILY SSF111283 42 537 9.68E-91 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CJD35_RS13330 c3d4be6f7a04e9940b15c34db23221e8 544 Pfam PF01523 Putative modulator of DNA gyrase 59 385 2.1E-59 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CJD35_RS09070 906226a7b33179171d9139d66b12fc1f 426 Pfam PF05159 Capsule polysaccharide biosynthesis protein 76 379 6.5E-73 T 28-03-2018 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 CJD35_RS09070 906226a7b33179171d9139d66b12fc1f 426 Gene3D G3DSA:3.40.50.2000 16 375 6.8E-4 T 28-03-2018 CJD35_RS07010 688e66a6a8dcb756e3b9329297e1bfea 887 SUPERFAMILY SSF55486 251 496 5.57E-72 T 28-03-2018 CJD35_RS07010 688e66a6a8dcb756e3b9329297e1bfea 887 Gene3D G3DSA:1.10.390.10 324 488 9.8E-49 T 28-03-2018 CJD35_RS07010 688e66a6a8dcb756e3b9329297e1bfea 887 Gene3D G3DSA:2.60.40.1730 32 239 2.8E-46 T 28-03-2018 CJD35_RS07010 688e66a6a8dcb756e3b9329297e1bfea 887 Pfam PF11838 ERAP1-like C-terminal domain 558 866 2.9E-38 T 28-03-2018 IPR024571 ERAP1-like C-terminal domain CJD35_RS07010 688e66a6a8dcb756e3b9329297e1bfea 887 Pfam PF01433 Peptidase family M1 domain 250 475 1.6E-74 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CJD35_RS07010 688e66a6a8dcb756e3b9329297e1bfea 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 301 311 1.1E-21 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CJD35_RS07010 688e66a6a8dcb756e3b9329297e1bfea 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 356 368 1.1E-21 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CJD35_RS07010 688e66a6a8dcb756e3b9329297e1bfea 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 222 237 1.1E-21 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CJD35_RS07010 688e66a6a8dcb756e3b9329297e1bfea 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 174 189 1.1E-21 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CJD35_RS07010 688e66a6a8dcb756e3b9329297e1bfea 887 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 337 352 1.1E-21 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CJD35_RS07010 688e66a6a8dcb756e3b9329297e1bfea 887 SUPERFAMILY SSF63737 42 239 1.19E-45 T 28-03-2018 CJD35_RS15175 fe4cfd88c338acfdede66ae61055f0ca 218 Gene3D G3DSA:3.40.50.150 3 202 8.9E-9 T 28-03-2018 CJD35_RS15175 fe4cfd88c338acfdede66ae61055f0ca 218 SUPERFAMILY SSF53335 11 156 1.05E-8 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS21250 0ed7e89042f19058725eebb62c553245 113 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 1.3E-26 T 28-03-2018 CJD35_RS18130 0ed7e89042f19058725eebb62c553245 113 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 1.3E-26 T 28-03-2018 CJD35_RS21815 ec5ef68d3026738fd56db1821967f56e 138 SUPERFAMILY SSF50118 9 96 3.27E-9 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CJD35_RS21815 ec5ef68d3026738fd56db1821967f56e 138 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 13 98 8.3E-10 T 28-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 CJD35_RS21815 ec5ef68d3026738fd56db1821967f56e 138 Gene3D G3DSA:2.30.30.110 6 113 1.2E-13 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CJD35_RS09360 31415caf579cdd432e0e16dc829b7553 152 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 11 152 45.216 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CJD35_RS09360 31415caf579cdd432e0e16dc829b7553 152 Pfam PF14437 MafB19-like deaminase 11 116 3.7E-27 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CJD35_RS09360 31415caf579cdd432e0e16dc829b7553 152 Gene3D G3DSA:3.40.140.10 9 152 2.1E-43 T 28-03-2018 CJD35_RS09360 31415caf579cdd432e0e16dc829b7553 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 56 93 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CJD35_RS09360 31415caf579cdd432e0e16dc829b7553 152 SUPERFAMILY SSF53927 10 151 2.84E-50 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CJD35_RS21120 0f12ea3d00672e2c1766b6b914fcd45b 183 Pfam PF05713 Bacterial mobilisation protein (MobC) 118 153 3.5E-7 T 28-03-2018 IPR008687 Bacterial mobilisation CJD35_RS20115 47f95b3c48f9bb3d829fbc6720d0aec3 274 Pfam PF14460 Prokaryotic E2 family D 80 244 4.2E-28 T 28-03-2018 IPR032787 Prokaryotic E2 family D CJD35_RS20115 47f95b3c48f9bb3d829fbc6720d0aec3 274 TIGRFAM TIGR03737 PRTRC_B: PRTRC system protein B 16 246 5.1E-48 T 28-03-2018 IPR022280 ParB-related, ThiF-related cassette, protein B CJD35_RS11765 3894fc0777de9f00b9de12afeda16f2a 250 SUPERFAMILY SSF53335 118 231 2.61E-15 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS11765 3894fc0777de9f00b9de12afeda16f2a 250 Pfam PF13489 Methyltransferase domain 126 197 2.0E-7 T 28-03-2018 CJD35_RS11765 3894fc0777de9f00b9de12afeda16f2a 250 Gene3D G3DSA:3.40.50.150 60 246 1.6E-13 T 28-03-2018 CJD35_RS20450 7dba24cd97627b5234e72de02c49c358 372 Pfam PF10134 Replication initiator protein A 24 256 6.0E-73 T 28-03-2018 IPR018777 Replication initiator protein A CJD35_RS03025 8b63049e00ebe4d6d90f49e438ce42fe 215 Gene3D G3DSA:3.20.20.70 21 199 4.3E-13 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS03025 8b63049e00ebe4d6d90f49e438ce42fe 215 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 215 30.612 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CJD35_RS03025 8b63049e00ebe4d6d90f49e438ce42fe 215 PIRSF PIRSF000370 1 215 1.8E-32 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CJD35_RS03025 8b63049e00ebe4d6d90f49e438ce42fe 215 SUPERFAMILY SSF102114 46 143 9.02E-8 T 28-03-2018 CJD35_RS03025 8b63049e00ebe4d6d90f49e438ce42fe 215 TIGRFAM TIGR04508 queE_Cx14CxxC: 7-carboxy-7-deazaguanine synthase 3 215 5.9E-101 T 28-03-2018 IPR030977 7-carboxy-7-deazaguanine synthase, Cx14CxxC-type GO:0008616|GO:0046872 KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CJD35_RS06705 ad489d3a04d549d4d4b06734e2b4e2c2 308 SUPERFAMILY SSF51735 1 249 1.1E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS06705 ad489d3a04d549d4d4b06734e2b4e2c2 308 Gene3D G3DSA:3.40.50.720 1 302 1.7E-47 T 28-03-2018 CJD35_RS06705 ad489d3a04d549d4d4b06734e2b4e2c2 308 Pfam PF13460 NAD(P)H-binding 10 154 1.0E-16 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS14980 4c6f221443344b414ebc1c6e9474abbc 261 SUPERFAMILY SSF51735 6 256 1.17E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS14980 4c6f221443344b414ebc1c6e9474abbc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.7E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS14980 4c6f221443344b414ebc1c6e9474abbc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.7E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS14980 4c6f221443344b414ebc1c6e9474abbc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.7E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS14980 4c6f221443344b414ebc1c6e9474abbc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.7E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS14980 4c6f221443344b414ebc1c6e9474abbc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 3.7E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS14980 4c6f221443344b414ebc1c6e9474abbc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.7E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS14980 4c6f221443344b414ebc1c6e9474abbc 261 Gene3D G3DSA:3.40.50.720 1 257 8.7E-51 T 28-03-2018 CJD35_RS14980 4c6f221443344b414ebc1c6e9474abbc 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 19 256 1.2E-40 T 28-03-2018 CJD35_RS15905 19386d78d0ee7095c1ad17a86c2d3765 485 SUPERFAMILY SSF53720 154 320 3.14E-8 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS15905 19386d78d0ee7095c1ad17a86c2d3765 485 Gene3D G3DSA:3.40.605.10 40 310 5.9E-10 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS15905 19386d78d0ee7095c1ad17a86c2d3765 485 Pfam PF05893 Acyl-CoA reductase (LuxC) 56 469 4.6E-60 T 28-03-2018 IPR008670 Long-chain-fatty-acyl-CoA reductase, LuxC GO:0003995|GO:0008218|GO:0055114 KEGG: 00073+1.2.1.50|MetaCyc: PWY-7723 CJD35_RS11740 71ebd7b8e051215c8afa14083cac1d16 407 Gene3D G3DSA:3.40.50.2000 187 385 2.2E-27 T 28-03-2018 CJD35_RS11740 71ebd7b8e051215c8afa14083cac1d16 407 SUPERFAMILY SSF53756 5 395 7.53E-36 T 28-03-2018 CJD35_RS11740 71ebd7b8e051215c8afa14083cac1d16 407 Pfam PF13579 Glycosyl transferase 4-like domain 22 207 3.6E-8 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CJD35_RS11740 71ebd7b8e051215c8afa14083cac1d16 407 TIGRFAM TIGR03087 stp1: sugar transferase, PEP-CTERM/EpsH1 system associated 5 397 2.2E-136 T 28-03-2018 IPR017521 Sugar transferase, PEP-CTERM, Stp1 CJD35_RS11740 71ebd7b8e051215c8afa14083cac1d16 407 Pfam PF13692 Glycosyl transferases group 1 228 365 4.0E-28 T 28-03-2018 CJD35_RS08685 60da61812e5521dd5c6738ab57290569 233 Gene3D G3DSA:3.40.50.300 2 207 7.0E-36 T 28-03-2018 CJD35_RS08685 60da61812e5521dd5c6738ab57290569 233 SUPERFAMILY SSF52540 1 188 1.04E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS08685 60da61812e5521dd5c6738ab57290569 233 Pfam PF13614 AAA domain 1 189 2.6E-30 T 28-03-2018 IPR025669 AAA domain CJD35_RS09445 3b1d4f2e6b59d4b0bbb4484bc45fa9bb 326 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 30 201 2.1E-48 T 28-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CJD35_RS09445 3b1d4f2e6b59d4b0bbb4484bc45fa9bb 326 Pfam PF01171 PP-loop family 30 199 2.5E-49 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CJD35_RS09445 3b1d4f2e6b59d4b0bbb4484bc45fa9bb 326 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 11 283 20.708 T 28-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CJD35_RS09445 3b1d4f2e6b59d4b0bbb4484bc45fa9bb 326 Gene3D G3DSA:3.40.50.620 26 238 2.8E-40 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS09445 3b1d4f2e6b59d4b0bbb4484bc45fa9bb 326 SUPERFAMILY SSF52402 28 200 1.81E-47 T 28-03-2018 CJD35_RS17365 f67116372746d869919e199497675511 390 Pfam PF00593 TonB dependent receptor 98 307 1.2E-9 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17365 f67116372746d869919e199497675511 390 SUPERFAMILY SSF56935 99 324 3.66E-15 T 28-03-2018 CJD35_RS17365 f67116372746d869919e199497675511 390 Gene3D G3DSA:2.40.170.20 45 357 4.5E-14 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS18470 3553ce50c571e24af1522a643a359870 140 SUPERFAMILY SSF158634 1 139 1.28E-43 T 28-03-2018 CJD35_RS18470 3553ce50c571e24af1522a643a359870 140 Pfam PF12200 Domain of unknown function (DUF3597) 3 135 4.5E-45 T 28-03-2018 IPR022016 Domain of unknown function DUF3597 CJD35_RS17560 a3fc7cbe2088bd9faf2214e22851de69 708 Gene3D G3DSA:2.40.170.20 148 708 6.0E-73 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17560 a3fc7cbe2088bd9faf2214e22851de69 708 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 691 708 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CJD35_RS17560 a3fc7cbe2088bd9faf2214e22851de69 708 Pfam PF00593 TonB dependent receptor 261 707 8.5E-42 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS17560 a3fc7cbe2088bd9faf2214e22851de69 708 Pfam PF07715 TonB-dependent Receptor Plug Domain 35 138 2.2E-15 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS17560 a3fc7cbe2088bd9faf2214e22851de69 708 SUPERFAMILY SSF56935 19 708 6.54E-108 T 28-03-2018 CJD35_RS17560 a3fc7cbe2088bd9faf2214e22851de69 708 Gene3D G3DSA:2.170.130.10 16 147 1.9E-24 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS16435 c1ca42b497bddb736cad806901f0d55a 167 Hamap MF_00775 UPF0311 protein . 11 167 22.982 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS16435 c1ca42b497bddb736cad806901f0d55a 167 Gene3D G3DSA:2.40.160.20 3 167 3.5E-40 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS16435 c1ca42b497bddb736cad806901f0d55a 167 Pfam PF11578 Protein of unknown function (DUF3237) 11 165 1.6E-33 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS03745 d51635796426e5bfb65367a628666d53 223 SUPERFAMILY SSF69618 1 219 2.35E-28 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CJD35_RS03745 d51635796426e5bfb65367a628666d53 223 Gene3D G3DSA:3.40.50.10090 1 104 3.5E-14 T 28-03-2018 CJD35_RS03745 d51635796426e5bfb65367a628666d53 223 Gene3D G3DSA:3.40.50.10090 105 221 3.2E-7 T 28-03-2018 CJD35_RS03745 d51635796426e5bfb65367a628666d53 223 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 215 7.7E-14 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CJD35_RS19740 a14a54edd38b4c8cc0bb0348d617f547 336 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 103 143 2.6E-6 T 28-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CJD35_RS10665 5dbfecafe3eb853a9bddf963d668a43f 121 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 97 5.2E-26 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS10665 5dbfecafe3eb853a9bddf963d668a43f 121 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 97 3.1E-33 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS10665 5dbfecafe3eb853a9bddf963d668a43f 121 SUPERFAMILY SSF141091 1 97 2.09E-31 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS10665 5dbfecafe3eb853a9bddf963d668a43f 121 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 99 23.914 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS05870 72fcf5dfd643e47bc857da50b609baf0 260 SUPERFAMILY SSF52540 1 254 3.68E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05870 72fcf5dfd643e47bc857da50b609baf0 260 Gene3D G3DSA:3.40.50.300 3 259 6.4E-59 T 28-03-2018 CJD35_RS05870 72fcf5dfd643e47bc857da50b609baf0 260 PIRSF PIRSF009320 1 79 3.7E-16 T 28-03-2018 CJD35_RS05870 72fcf5dfd643e47bc857da50b609baf0 260 PIRSF PIRSF009320 92 254 4.6E-4 T 28-03-2018 CJD35_RS05870 72fcf5dfd643e47bc857da50b609baf0 260 Pfam PF13614 AAA domain 3 178 7.4E-60 T 28-03-2018 IPR025669 AAA domain CJD35_RS00280 b656846ce35f18970b960290f315d947 180 Gene3D G3DSA:3.90.1140.10 1 175 3.0E-38 T 28-03-2018 CJD35_RS00280 b656846ce35f18970b960290f315d947 180 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 2 176 22.119 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CJD35_RS00280 b656846ce35f18970b960290f315d947 180 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 3 173 4.6E-42 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CJD35_RS00280 b656846ce35f18970b960290f315d947 180 SUPERFAMILY SSF55144 3 174 9.24E-43 T 28-03-2018 IPR009097 Cyclic phosphodiesterase CJD35_RS00280 b656846ce35f18970b960290f315d947 180 Pfam PF13563 2'-5' RNA ligase superfamily 29 159 7.2E-15 T 28-03-2018 CJD35_RS17125 4c4175a1d75d6bbea189ad8b3f591e9f 487 Pfam PF13372 Alginate export 87 475 6.2E-29 T 28-03-2018 IPR025388 Alginate export domain CJD35_RS21865 1d0d6ebbb6632a8ed52d5215f843011b 98 Pfam PF04956 TrbC/VIRB2 family 5 95 4.9E-19 T 28-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CJD35_RS02735 7a88f5a15808b74b0a591b50b0e4b968 190 Gene3D G3DSA:1.20.1260.10 40 189 4.2E-26 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS02735 7a88f5a15808b74b0a591b50b0e4b968 190 Pfam PF13628 Domain of unknown function (DUF4142) 52 188 3.4E-37 T 28-03-2018 IPR025419 Domain of unknown function DUF4142 CJD35_RS18970 e5da7b421a65230c981434a526cb6415 290 Gene3D G3DSA:3.40.50.1010 6 150 1.5E-19 T 28-03-2018 IPR029060 PIN domain-like CJD35_RS18970 e5da7b421a65230c981434a526cb6415 290 Pfam PF12872 OST-HTH/LOTUS domain 208 275 1.1E-9 T 28-03-2018 IPR025605 OST-HTH/LOTUS domain CJD35_RS18970 e5da7b421a65230c981434a526cb6415 290 Pfam PF01936 NYN domain 14 149 7.1E-32 T 28-03-2018 IPR021139 NYN domain, limkain-b1-type CJD35_RS17505 72bea5d853b4670da3647fa40357514d 446 Pfam PF07586 Protein of unknown function (DUF1552) 44 353 4.8E-93 T 28-03-2018 IPR011447 Protein of unknown function DUF1552 CJD35_RS03465 b25c769a924b62fd229e74da4b046653 347 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 32 336 1.9E-51 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CJD35_RS03465 b25c769a924b62fd229e74da4b046653 347 Gene3D G3DSA:3.20.20.190 19 346 1.3E-69 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CJD35_RS03465 b25c769a924b62fd229e74da4b046653 347 SUPERFAMILY SSF51695 27 342 6.28E-74 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CJD35_RS21890 4cdaa439f16d163b45eeb344a2664a2f 334 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 38 263 9.8E-28 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 CJD35_RS19965 5a9d905861a4b749402655b58e3e37f9 359 Pfam PF10686 Protein of unknown function (DUF2493) 203 268 1.8E-21 T 28-03-2018 IPR019627 Mycobacteriophage D29, Gp61 CJD35_RS19965 5a9d905861a4b749402655b58e3e37f9 359 Gene3D G3DSA:3.40.50.2300 238 349 9.1E-4 T 28-03-2018 CJD35_RS13440 4caabaf719d5cc877d671a6a22d01861 217 Pfam PF03473 MOSC domain 51 162 8.0E-21 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CJD35_RS13440 4caabaf719d5cc877d671a6a22d01861 217 Gene3D G3DSA:2.40.33.20 2 217 3.0E-44 T 28-03-2018 CJD35_RS13440 4caabaf719d5cc877d671a6a22d01861 217 SUPERFAMILY SSF50800 5 215 1.15E-62 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CJD35_RS01565 f9762c41d362a585fed082a428406513 289 SUPERFAMILY SSF56300 52 287 2.92E-30 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS01565 f9762c41d362a585fed082a428406513 289 Pfam PF00149 Calcineurin-like phosphoesterase 56 224 6.6E-7 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CJD35_RS01565 f9762c41d362a585fed082a428406513 289 Gene3D G3DSA:3.60.21.10 52 286 8.9E-21 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS07025 62180147a54bfe66c691fd0dd8d05fce 60 Pfam PF12244 Protein of unknown function (DUF3606) 4 57 2.0E-19 T 28-03-2018 IPR022037 Protein of unknown function DUF3606 CJD35_RS17300 2d3e548beebce6de396fb7bca1a6fc61 265 Pfam PF01925 Sulfite exporter TauE/SafE 12 251 7.9E-50 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CJD35_RS08480 21ce894b3d0ded5d5ed38e251186eaec 352 Gene3D G3DSA:3.40.50.150 23 298 3.1E-9 T 28-03-2018 CJD35_RS08480 21ce894b3d0ded5d5ed38e251186eaec 352 SUPERFAMILY SSF53335 8 352 7.64E-93 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS08480 21ce894b3d0ded5d5ed38e251186eaec 352 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 61 290 2.8E-54 T 28-03-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 CJD35_RS16715 24e6040d4f798b75d60e143dea7922de 278 Pfam PF05425 Copper resistance protein D 170 271 1.6E-21 T 28-03-2018 IPR008457 Copper resistance protein D GO:0016021 CJD35_RS19775 68ef1d82abb8394b1fb9524a521d9378 339 Pfam PF06834 TraU protein 33 338 8.7E-116 T 28-03-2018 IPR009649 TraU CJD35_RS18710 2ba3349bd458bb6ecbfd5ea7b6b3d535 132 Gene3D G3DSA:3.40.50.2300 4 132 3.7E-28 T 28-03-2018 CJD35_RS18710 2ba3349bd458bb6ecbfd5ea7b6b3d535 132 SMART SM00448 15 125 2.4E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS18710 2ba3349bd458bb6ecbfd5ea7b6b3d535 132 SUPERFAMILY SSF52172 14 129 1.35E-29 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS18710 2ba3349bd458bb6ecbfd5ea7b6b3d535 132 Pfam PF00072 Response regulator receiver domain 17 125 1.1E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS21585 2ae76029251bda5dbbfff331c4b8b424 146 Pfam PF13801 Heavy-metal resistance 12 130 3.5E-18 T 28-03-2018 IPR025961 Heavy-metal resistance protein CJD35_RS01765 44a74052dc13916dbb44ee4f8308afa9 144 SMART SM00881 12 107 6.1E-25 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CJD35_RS01765 44a74052dc13916dbb44ee4f8308afa9 144 Pfam PF13380 CoA binding domain 17 133 6.2E-37 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CJD35_RS01765 44a74052dc13916dbb44ee4f8308afa9 144 SUPERFAMILY SSF51735 7 137 9.45E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS01765 44a74052dc13916dbb44ee4f8308afa9 144 Gene3D G3DSA:3.40.50.720 13 137 7.3E-32 T 28-03-2018 CJD35_RS22045 e95484704c6d6b3b1e404b4b0ffec31d 161 Pfam PF14307 Glycosyltransferase WbsX 10 112 1.2E-26 T 28-03-2018 IPR032719 Glycosyltransferase WbsX CJD35_RS16300 597ad024e75a4f7c6111a2fa2e00af5f 304 Gene3D G3DSA:3.40.50.720 2 158 1.1E-20 T 28-03-2018 CJD35_RS16300 597ad024e75a4f7c6111a2fa2e00af5f 304 Pfam PF13460 NAD(P)H-binding 8 190 1.4E-16 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS16300 597ad024e75a4f7c6111a2fa2e00af5f 304 SUPERFAMILY SSF51735 4 237 3.38E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS08165 4e42739b052a562331da811adb386800 205 SUPERFAMILY SSF53098 15 192 3.08E-48 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS08165 4e42739b052a562331da811adb386800 205 Gene3D G3DSA:3.30.420.10 8 191 7.0E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS08165 4e42739b052a562331da811adb386800 205 Pfam PF01612 3'-5' exonuclease 16 170 6.8E-33 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CJD35_RS08165 4e42739b052a562331da811adb386800 205 SMART SM00474 1 170 8.8E-28 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CJD35_RS01895 719e808a425066027c103eb3e90282ca 138 Pfam PF01844 HNH endonuclease 25 73 1.2E-5 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CJD35_RS01895 719e808a425066027c103eb3e90282ca 138 Gene3D G3DSA:3.40.1800.10 5 85 3.3E-7 T 28-03-2018 CJD35_RS06280 827c4daf51d32838769044b03bc2c291 329 Pfam PF03060 Nitronate monooxygenase 4 311 6.7E-54 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 CJD35_RS06280 827c4daf51d32838769044b03bc2c291 329 Gene3D G3DSA:3.20.20.70 1 322 1.1E-56 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS06280 827c4daf51d32838769044b03bc2c291 329 SUPERFAMILY SSF51412 4 317 5.63E-64 T 28-03-2018 CJD35_RS01980 bef1b735630f834e233072ae352a229e 131 SUPERFAMILY SSF81343 4 127 2.16E-29 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01980 bef1b735630f834e233072ae352a229e 131 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 7 31 - T 28-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01980 bef1b735630f834e233072ae352a229e 131 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 121 3.1E-27 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01980 bef1b735630f834e233072ae352a229e 131 PIRSF PIRSF000178 1 127 3.1E-30 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS01980 bef1b735630f834e233072ae352a229e 131 Gene3D G3DSA:1.20.1300.10 18 129 1.6E-28 T 28-03-2018 CJD35_RS01980 bef1b735630f834e233072ae352a229e 131 Gene3D G3DSA:1.20.5.540 3 17 6.0E-4 T 28-03-2018 CJD35_RS01980 bef1b735630f834e233072ae352a229e 131 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 124 5.0E-33 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CJD35_RS21565 3a986c082d756e83f74322d90ca71eb6 161 Pfam PF13700 Domain of unknown function (DUF4158) 13 160 2.4E-42 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CJD35_RS16675 2c339e36b84c4d970871dfe1e0ad8cd9 150 Gene3D G3DSA:2.40.160.20 1 150 3.5E-42 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS16675 2c339e36b84c4d970871dfe1e0ad8cd9 150 Pfam PF11578 Protein of unknown function (DUF3237) 2 149 6.2E-36 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS16675 2c339e36b84c4d970871dfe1e0ad8cd9 150 Hamap MF_00775 UPF0311 protein . 1 150 23.541 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS13835 6d84d09ebd12d09ff512c6e4e73ef1cb 98 ProDom PD012578 PLASMID TOXIN CCDB CYTOTOXIC LETB POST-SEGREGATION SYSTEM CCDB-LIKE GYRASE FUSED-CCDB 14 97 2.0E-10 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CJD35_RS13835 6d84d09ebd12d09ff512c6e4e73ef1cb 98 SUPERFAMILY SSF50118 3 98 9.81E-23 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CJD35_RS13835 6d84d09ebd12d09ff512c6e4e73ef1cb 98 Pfam PF01845 CcdB protein 12 97 4.7E-26 T 28-03-2018 IPR002712 Toxin CcdB GO:0006276|GO:0008657 CJD35_RS13835 6d84d09ebd12d09ff512c6e4e73ef1cb 98 Gene3D G3DSA:2.30.30.110 3 97 9.0E-17 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CJD35_RS10350 50ed0102b43fd376782e52c96c065331 258 Pfam PF02616 Segregation and condensation protein ScpA 34 246 2.7E-12 T 28-03-2018 IPR003768 Segregation and condensation protein A CJD35_RS10350 50ed0102b43fd376782e52c96c065331 258 Gene3D G3DSA:1.10.10.580 179 249 6.2E-9 T 28-03-2018 CJD35_RS13645 0e272d0babd96432b2253345d58c645e 722 Pfam PF16510 Phage P22-like portal protein 29 672 3.5E-116 T 28-03-2018 IPR032427 Phage P22-like portal protein CJD35_RS06580 34b5892da1b6871c2542ccb106fa85a8 306 Gene3D G3DSA:3.40.50.300 5 305 2.7E-40 T 28-03-2018 CJD35_RS06580 34b5892da1b6871c2542ccb106fa85a8 306 Pfam PF00685 Sulfotransferase domain 9 222 5.6E-10 T 28-03-2018 IPR000863 Sulfotransferase domain GO:0008146 CJD35_RS06580 34b5892da1b6871c2542ccb106fa85a8 306 SUPERFAMILY SSF52540 169 237 7.27E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06580 34b5892da1b6871c2542ccb106fa85a8 306 SUPERFAMILY SSF52540 4 140 7.27E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14035 cf001f63423415059b843b4ff8488733 360 Pfam PF00924 Mechanosensitive ion channel 139 287 1.4E-23 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CJD35_RS14035 cf001f63423415059b843b4ff8488733 360 SUPERFAMILY SSF50182 181 245 4.58E-14 T 28-03-2018 IPR010920 LSM domain CJD35_RS14035 cf001f63423415059b843b4ff8488733 360 Gene3D G3DSA:2.30.30.60 197 246 9.9E-10 T 28-03-2018 CJD35_RS13550 abb26b8eba050b79b0748a195b535f3b 94 SUPERFAMILY SSF51120 3 94 2.88E-7 T 28-03-2018 IPR011049 Serralysin-like metalloprotease, C-terminal CJD35_RS21805 a0cb4d34f0757c70b52d7a315eeff169 307 PIRSF PIRSF037112 1 307 2.6E-106 T 28-03-2018 IPR017113 Antirestriction, ArdC CJD35_RS21805 a0cb4d34f0757c70b52d7a315eeff169 307 Pfam PF08401 Domain of unknown function (DUF1738) 10 128 6.9E-38 T 28-03-2018 IPR013610 Domain of unknown function DUF1738 CJD35_RS08730 c7e70dfb2a80d7ea34b3ba2a319c7b14 128 Pfam PF03703 Bacterial PH domain 46 115 8.8E-14 T 28-03-2018 IPR005182 Domain of unknown function DUF304 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 SUPERFAMILY SSF55961 169 445 5.73E-69 T 28-03-2018 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 109 129 6.3E-64 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 193 215 6.3E-64 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 67 82 6.3E-64 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 88 108 6.3E-64 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 6.3E-64 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 37 62 6.3E-64 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 Pfam PF00355 Rieske [2Fe-2S] domain 52 136 5.3E-21 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 95 118 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 SUPERFAMILY SSF50022 24 168 2.75E-48 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 Gene3D G3DSA:3.90.380.10 155 447 7.6E-70 T 28-03-2018 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 184 438 2.5E-41 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CJD35_RS20490 917a5622301d08008d1ec99c04faf221 455 Gene3D G3DSA:2.102.10.10 45 154 1.6E-20 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CJD35_RS09980 a493b5036d3b9979018dc45a18fddab0 385 Gene3D G3DSA:3.40.630.30 184 383 2.9E-10 T 28-03-2018 CJD35_RS09980 a493b5036d3b9979018dc45a18fddab0 385 Gene3D G3DSA:3.40.630.30 1 183 3.1E-11 T 28-03-2018 CJD35_RS09980 a493b5036d3b9979018dc45a18fddab0 385 SUPERFAMILY SSF55729 148 340 5.92E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS09980 a493b5036d3b9979018dc45a18fddab0 385 SUPERFAMILY SSF55729 11 120 5.92E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS13915 4f87353628b01c29541aa5c3f10b8df9 369 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 364 1.6E-139 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CJD35_RS13915 4f87353628b01c29541aa5c3f10b8df9 369 SUPERFAMILY SSF53756 1 368 3.84E-125 T 28-03-2018 CJD35_RS13915 4f87353628b01c29541aa5c3f10b8df9 369 Gene3D G3DSA:3.40.50.2000 1 208 2.3E-67 T 28-03-2018 CJD35_RS13915 4f87353628b01c29541aa5c3f10b8df9 369 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 367 6.1E-113 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 CJD35_RS13915 4f87353628b01c29541aa5c3f10b8df9 369 Gene3D G3DSA:3.40.50.2000 209 348 6.1E-40 T 28-03-2018 CJD35_RS16380 bba496b414aa0018a51b916d8a4eebe3 244 Pfam PF12697 Alpha/beta hydrolase family 55 231 2.7E-12 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS16380 bba496b414aa0018a51b916d8a4eebe3 244 SUPERFAMILY SSF53474 11 239 5.36E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS16380 bba496b414aa0018a51b916d8a4eebe3 244 Gene3D G3DSA:3.40.50.1820 5 240 2.1E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS16380 bba496b414aa0018a51b916d8a4eebe3 244 PRINTS PR00111 Alpha/beta hydrolase fold signature 68 81 3.7E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS16380 bba496b414aa0018a51b916d8a4eebe3 244 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 3.7E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS16380 bba496b414aa0018a51b916d8a4eebe3 244 PRINTS PR00111 Alpha/beta hydrolase fold signature 184 198 3.7E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS04675 b7c28b46210e1852016c22b416775cfc 103 Gene3D G3DSA:1.20.58.130 41 102 5.9E-5 T 28-03-2018 CJD35_RS07745 547eeca22405730a164dcd7322b9e457 289 SUPERFAMILY SSF53807 22 263 1.69E-29 T 28-03-2018 CJD35_RS07745 547eeca22405730a164dcd7322b9e457 289 Gene3D G3DSA:3.40.50.1980 119 270 1.4E-23 T 28-03-2018 CJD35_RS07745 547eeca22405730a164dcd7322b9e457 289 Gene3D G3DSA:3.40.50.1980 12 118 7.4E-9 T 28-03-2018 CJD35_RS07745 547eeca22405730a164dcd7322b9e457 289 Pfam PF01497 Periplasmic binding protein 25 236 1.6E-18 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CJD35_RS07970 ee20fc0e370baeae173c2edf477c5c68 496 Gene3D G3DSA:3.30.1120.10 369 476 2.2E-11 T 28-03-2018 CJD35_RS07970 ee20fc0e370baeae173c2edf477c5c68 496 SUPERFAMILY SSF53649 235 470 1.28E-84 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJD35_RS07970 ee20fc0e370baeae173c2edf477c5c68 496 SUPERFAMILY SSF53649 38 208 1.28E-84 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CJD35_RS07970 ee20fc0e370baeae173c2edf477c5c68 496 Gene3D G3DSA:3.40.720.10 38 368 2.1E-62 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CJD35_RS07970 ee20fc0e370baeae173c2edf477c5c68 496 Pfam PF00884 Sulfatase 41 325 2.3E-38 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CJD35_RS19690 54ced701c7428662fc887ace23ff3157 338 SUPERFAMILY SSF53955 146 305 1.44E-33 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS19690 54ced701c7428662fc887ace23ff3157 338 Gene3D G3DSA:1.10.530.10 168 307 1.8E-32 T 28-03-2018 CJD35_RS19690 54ced701c7428662fc887ace23ff3157 338 Pfam PF01464 Transglycosylase SLT domain 191 282 5.2E-18 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CJD35_RS00970 a45b2f0b6ff433a6ae233a63198e8724 435 SUPERFAMILY SSF53187 352 429 1.5E-37 T 28-03-2018 CJD35_RS00970 a45b2f0b6ff433a6ae233a63198e8724 435 SUPERFAMILY SSF53187 29 224 1.5E-37 T 28-03-2018 CJD35_RS00970 a45b2f0b6ff433a6ae233a63198e8724 435 Pfam PF01546 Peptidase family M20/M25/M40 105 420 4.6E-22 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CJD35_RS00970 a45b2f0b6ff433a6ae233a63198e8724 435 Gene3D G3DSA:3.30.70.360 220 346 8.1E-19 T 28-03-2018 CJD35_RS00970 a45b2f0b6ff433a6ae233a63198e8724 435 SUPERFAMILY SSF55031 218 342 4.04E-10 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS00970 a45b2f0b6ff433a6ae233a63198e8724 435 Pfam PF07687 Peptidase dimerisation domain 212 325 2.8E-14 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CJD35_RS00970 a45b2f0b6ff433a6ae233a63198e8724 435 Gene3D G3DSA:3.40.630.10 28 219 2.3E-22 T 28-03-2018 CJD35_RS08975 bd72c7fbf81e8d59fea8ee90a3a8b8ae 249 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 7 176 8.8E-67 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CJD35_RS08975 bd72c7fbf81e8d59fea8ee90a3a8b8ae 249 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 9 188 1.4E-56 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CJD35_RS08975 bd72c7fbf81e8d59fea8ee90a3a8b8ae 249 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 249 74.944 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CJD35_RS08975 bd72c7fbf81e8d59fea8ee90a3a8b8ae 249 SUPERFAMILY SSF55729 3 189 1.64E-72 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS04475 cce41643df5c4255fbbba33a5c1c4b11 347 Pfam PF01757 Acyltransferase family 29 310 5.3E-23 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CJD35_RS09845 0bd68ee2d338a2385172c4475b2a5b6f 464 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 167 459 5.7E-84 T 28-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CJD35_RS09845 0bd68ee2d338a2385172c4475b2a5b6f 464 SUPERFAMILY SSF161098 228 451 3.53E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJD35_RS09845 0bd68ee2d338a2385172c4475b2a5b6f 464 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 249 456 7.9E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CJD35_RS09845 0bd68ee2d338a2385172c4475b2a5b6f 464 Gene3D G3DSA:1.10.3720.10 158 454 6.8E-34 T 28-03-2018 CJD35_RS09845 0bd68ee2d338a2385172c4475b2a5b6f 464 Pfam PF12501 Phosphate ATP-binding cassette transporter 8 182 8.5E-31 T 28-03-2018 IPR022182 ABC transporter phosphate permease PstC, N-terminal domain GO:0006817 CJD35_RS12550 9f4d87955c690e38e03a2cfcd4b20a35 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 318 342 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CJD35_RS12550 9f4d87955c690e38e03a2cfcd4b20a35 370 Pfam PF01098 Cell cycle protein 15 360 7.4E-98 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CJD35_RS12550 9f4d87955c690e38e03a2cfcd4b20a35 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 13 358 3.2E-125 T 28-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CJD35_RS05715 123110f62b40b981fccb27a5b8f2ba37 164 PIRSF PIRSF031796 1 162 2.2E-38 T 28-03-2018 IPR009394 DNA repair protein MmcB-like CJD35_RS05715 123110f62b40b981fccb27a5b8f2ba37 164 Pfam PF06319 DNA repair protein MmcB-like 15 156 2.3E-42 T 28-03-2018 IPR009394 DNA repair protein MmcB-like CJD35_RS15360 15e10a64d70936ca990c69895c424907 90 Pfam PF05239 PRC-barrel domain 27 78 9.2E-5 T 28-03-2018 IPR027275 PRC-barrel domain CJD35_RS15360 15e10a64d70936ca990c69895c424907 90 Gene3D G3DSA:3.90.50.10 26 90 1.0E-5 T 28-03-2018 CJD35_RS03425 331a5995c28441165b3d01eeb582f9ee 155 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 7.7E-35 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJD35_RS03425 331a5995c28441165b3d01eeb582f9ee 155 SMART SM00226 2 149 1.1E-46 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJD35_RS03425 331a5995c28441165b3d01eeb582f9ee 155 SUPERFAMILY SSF52788 1 150 3.27E-47 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CJD35_RS03425 331a5995c28441165b3d01eeb582f9ee 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 8.6E-21 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CJD35_RS03425 331a5995c28441165b3d01eeb582f9ee 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 8.6E-21 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CJD35_RS03425 331a5995c28441165b3d01eeb582f9ee 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 121 136 8.6E-21 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CJD35_RS03425 331a5995c28441165b3d01eeb582f9ee 155 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 8.6E-21 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CJD35_RS03425 331a5995c28441165b3d01eeb582f9ee 155 Gene3D G3DSA:3.40.50.2300 1 155 5.3E-47 T 28-03-2018 CJD35_RS06075 5285f1ee9cb10d2b59d7c896c53712c9 150 SUPERFAMILY SSF117916 57 149 3.92E-32 T 28-03-2018 IPR034904 Fe-S cluster assembly domain CJD35_RS06075 5285f1ee9cb10d2b59d7c896c53712c9 150 Gene3D G3DSA:3.30.300.130 52 149 4.0E-28 T 28-03-2018 IPR034904 Fe-S cluster assembly domain CJD35_RS06075 5285f1ee9cb10d2b59d7c896c53712c9 150 Pfam PF01883 Iron-sulfur cluster assembly protein 57 127 1.1E-19 T 28-03-2018 IPR002744 MIP18 family-like CJD35_RS06075 5285f1ee9cb10d2b59d7c896c53712c9 150 TIGRFAM TIGR02945 SUF_assoc: FeS assembly SUF system protein 53 150 2.0E-45 T 28-03-2018 IPR014291 SUF system FeS cluster assembly associated CJD35_RS11240 9f871a2f3c169b6c9cee8f1575afd05b 250 Pfam PF04989 Cephalosporin hydroxylase 41 248 8.6E-85 T 28-03-2018 IPR007072 Rhamnosyl O-methyltransferase/Cephalosporin hydroxylase GO:0008168|GO:0008610 CJD35_RS11240 9f871a2f3c169b6c9cee8f1575afd05b 250 Gene3D G3DSA:3.40.50.150 10 243 3.6E-9 T 28-03-2018 CJD35_RS11240 9f871a2f3c169b6c9cee8f1575afd05b 250 SUPERFAMILY SSF53335 32 228 6.05E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS01710 48dade663fd3d9c9b342210e4c86b704 174 Pfam PF10029 Predicted periplasmic protein (DUF2271) 27 166 1.3E-45 T 28-03-2018 IPR014469 Protein of unknown function DUF2271 CJD35_RS01710 48dade663fd3d9c9b342210e4c86b704 174 PIRSF PIRSF014995 3 174 4.3E-58 T 28-03-2018 IPR014469 Protein of unknown function DUF2271 CJD35_RS06050 f3f7b80ff480c15af2c4839db50a4083 133 SUPERFAMILY SSF52980 5 122 1.23E-17 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CJD35_RS06050 f3f7b80ff480c15af2c4839db50a4083 133 Pfam PF04480 Protein of unknown function (DUF559) 3 105 1.8E-29 T 28-03-2018 IPR007569 Domain of unknown function DUF559 CJD35_RS06050 f3f7b80ff480c15af2c4839db50a4083 133 Gene3D G3DSA:3.40.960.10 12 119 3.7E-22 T 28-03-2018 CJD35_RS13175 908c04a79e95f90aea0676f1349e7b0a 323 Gene3D G3DSA:1.10.8.60 166 255 1.3E-8 T 28-03-2018 CJD35_RS13175 908c04a79e95f90aea0676f1349e7b0a 323 SUPERFAMILY SSF52540 1 216 6.0E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS13175 908c04a79e95f90aea0676f1349e7b0a 323 Pfam PF13177 DNA polymerase III, delta subunit 8 178 7.4E-35 T 28-03-2018 CJD35_RS13175 908c04a79e95f90aea0676f1349e7b0a 323 SMART SM00382 23 177 9.8E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS13175 908c04a79e95f90aea0676f1349e7b0a 323 Gene3D G3DSA:3.40.50.300 1 165 1.3E-27 T 28-03-2018 CJD35_RS00745 b998a95af73c0d1ed7d72f4c501c6a86 423 Gene3D G3DSA:1.10.3430.10 22 401 4.3E-87 T 28-03-2018 CJD35_RS00745 b998a95af73c0d1ed7d72f4c501c6a86 423 ProSitePatterns PS01219 Ammonium transporters signature. 181 206 - T 28-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CJD35_RS00745 b998a95af73c0d1ed7d72f4c501c6a86 423 Pfam PF00909 Ammonium Transporter Family 33 419 7.5E-72 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CJD35_RS00745 b998a95af73c0d1ed7d72f4c501c6a86 423 SUPERFAMILY SSF111352 26 401 1.31E-80 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CJD35_RS11145 f582abb359a17bf64d699909a859df06 413 Pfam PF09594 Glycosyltransferase family 87 95 317 1.2E-30 T 28-03-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 CJD35_RS04405 1521ad7c7316effc29f9b7fabcbe4de0 218 Gene3D G3DSA:3.40.50.1000 66 201 9.3E-11 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS04405 1521ad7c7316effc29f9b7fabcbe4de0 218 SUPERFAMILY SSF56784 1 39 2.82E-8 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS04405 1521ad7c7316effc29f9b7fabcbe4de0 218 SUPERFAMILY SSF56784 70 157 2.82E-8 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS07805 f3fa03dbf54f37472069cd1ed72c7049 234 Pfam PF00445 Ribonuclease T2 family 53 216 1.2E-16 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CJD35_RS07805 f3fa03dbf54f37472069cd1ed72c7049 234 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 84 91 - T 28-03-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CJD35_RS07805 f3fa03dbf54f37472069cd1ed72c7049 234 Gene3D G3DSA:3.90.730.10 48 233 2.7E-35 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CJD35_RS07805 f3fa03dbf54f37472069cd1ed72c7049 234 SUPERFAMILY SSF55895 49 224 1.02E-37 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CJD35_RS07805 f3fa03dbf54f37472069cd1ed72c7049 234 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 125 136 - T 28-03-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 CJD35_RS04715 c83215874fa29364f4a10d7c4dff1de6 235 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 18 224 2.9E-62 T 28-03-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 CJD35_RS04715 c83215874fa29364f4a10d7c4dff1de6 235 Pfam PF01618 MotA/TolQ/ExbB proton channel family 88 216 7.2E-40 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CJD35_RS04715 c83215874fa29364f4a10d7c4dff1de6 235 TIGRFAM TIGR02796 tolQ: protein TolQ 20 229 9.6E-78 T 28-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 CJD35_RS21735 6efdc0a52b050f56def91c03a09eeebe 162 Gene3D G3DSA:3.30.530.20 3 147 1.3E-12 T 28-03-2018 IPR023393 START-like domain CJD35_RS21735 6efdc0a52b050f56def91c03a09eeebe 162 SUPERFAMILY SSF55961 14 137 1.91E-13 T 28-03-2018 CJD35_RS08380 589f3e3d0a446a842059435017b22ffe 224 Pfam PF13645 L,D-transpeptidase catalytic domain 56 217 1.7E-43 T 28-03-2018 IPR032676 Putative L,D-transpeptidase catalytic domain CJD35_RS09530 85b8746e3dcf27c8f3f653ba1e898ac5 499 Pfam PF03354 Phage Terminase 30 486 1.1E-54 T 28-03-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type CJD35_RS13600 402e26a63750db162e7bfaf991f55dca 316 Pfam PF01555 DNA methylase 37 297 6.5E-18 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CJD35_RS13600 402e26a63750db162e7bfaf991f55dca 316 SUPERFAMILY SSF53335 9 301 9.08E-34 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS13600 402e26a63750db162e7bfaf991f55dca 316 Gene3D G3DSA:3.40.50.150 15 307 8.7E-36 T 28-03-2018 CJD35_RS13600 402e26a63750db162e7bfaf991f55dca 316 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 32 46 4.9E-10 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJD35_RS13600 402e26a63750db162e7bfaf991f55dca 316 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 239 256 4.9E-10 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJD35_RS13600 402e26a63750db162e7bfaf991f55dca 316 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 258 276 4.9E-10 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJD35_RS13600 402e26a63750db162e7bfaf991f55dca 316 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 281 301 4.9E-10 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CJD35_RS14270 efe71b3bfddb2530c7c84dd9317ec5a9 128 SUPERFAMILY SSF48452 38 93 2.0E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS14270 efe71b3bfddb2530c7c84dd9317ec5a9 128 Gene3D G3DSA:1.25.40.10 41 121 9.7E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS09155 218a2b80024eedf051241c955a27b942 232 SUPERFAMILY SSF47090 178 224 2.51E-11 T 28-03-2018 IPR002477 Peptidoglycan binding-like CJD35_RS09155 218a2b80024eedf051241c955a27b942 232 Gene3D G3DSA:3.40.80.10 1 159 4.5E-44 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CJD35_RS09155 218a2b80024eedf051241c955a27b942 232 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 19 146 1.0E-32 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CJD35_RS09155 218a2b80024eedf051241c955a27b942 232 SUPERFAMILY SSF55846 9 157 8.38E-54 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CJD35_RS09155 218a2b80024eedf051241c955a27b942 232 SMART SM00644 9 146 1.2E-38 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CJD35_RS02870 a4e06a1479e0fd0b3a5d8a44cf2a50d4 198 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 27 176 4.9E-37 T 28-03-2018 IPR018639 Domain of unknown function DUF2062 CJD35_RS02755 6e1fa28aef8b35fa4d9fa3ba35acb207 292 Gene3D G3DSA:1.10.1660.10 61 290 9.3E-5 T 28-03-2018 CJD35_RS11345 f0489c1c2013bf88f72b64627ea84c76 294 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 44 58 3.1E-5 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CJD35_RS11345 f0489c1c2013bf88f72b64627ea84c76 294 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 186 198 3.1E-5 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CJD35_RS11345 f0489c1c2013bf88f72b64627ea84c76 294 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 21 37 3.1E-5 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CJD35_RS11345 f0489c1c2013bf88f72b64627ea84c76 294 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 21 252 4.9E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CJD35_RS11345 f0489c1c2013bf88f72b64627ea84c76 294 Gene3D G3DSA:3.40.50.150 12 278 1.2E-27 T 28-03-2018 CJD35_RS11345 f0489c1c2013bf88f72b64627ea84c76 294 SUPERFAMILY SSF53335 16 269 2.99E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS16835 6d7e75abbfa4edf2cf6b7c0c43dc2f1d 312 Gene3D G3DSA:3.30.360.10 134 311 5.6E-27 T 28-03-2018 CJD35_RS16835 6d7e75abbfa4edf2cf6b7c0c43dc2f1d 312 SUPERFAMILY SSF51735 2 140 1.83E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS16835 6d7e75abbfa4edf2cf6b7c0c43dc2f1d 312 Gene3D G3DSA:3.40.50.720 1 133 6.9E-37 T 28-03-2018 CJD35_RS16835 6d7e75abbfa4edf2cf6b7c0c43dc2f1d 312 SUPERFAMILY SSF55347 125 253 7.63E-12 T 28-03-2018 CJD35_RS16835 6d7e75abbfa4edf2cf6b7c0c43dc2f1d 312 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 120 3.6E-22 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CJD35_RS21765 77167a3f13e785b17f85b103e96b2441 202 SUPERFAMILY SSF161111 11 191 1.31E-34 T 28-03-2018 CJD35_RS21765 77167a3f13e785b17f85b103e96b2441 202 Pfam PF01545 Cation efflux family 16 190 7.1E-16 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CJD35_RS21765 77167a3f13e785b17f85b103e96b2441 202 Gene3D G3DSA:1.20.1510.10 11 193 3.7E-20 T 28-03-2018 CJD35_RS15885 89b72c3e48cc9bd5e154c7dad33b62b7 359 SUPERFAMILY SSF51430 18 330 6.29E-91 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS15885 89b72c3e48cc9bd5e154c7dad33b62b7 359 Pfam PF00248 Aldo/keto reductase family 30 328 3.3E-70 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS15885 89b72c3e48cc9bd5e154c7dad33b62b7 359 Gene3D G3DSA:3.20.20.100 18 332 2.9E-88 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS10470 b548a3672ee30813d045b84e308fab8a 314 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 63 287 20.461 T 28-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 CJD35_RS10470 b548a3672ee30813d045b84e308fab8a 314 Pfam PF08478 POTRA domain, FtsQ-type 92 160 1.2E-12 T 28-03-2018 IPR013685 POTRA domain, FtsQ-type CJD35_RS10470 b548a3672ee30813d045b84e308fab8a 314 Pfam PF03799 Cell division protein FtsQ 164 279 7.4E-14 T 28-03-2018 IPR005548 Cell division protein FtsQ/DivIB CJD35_RS02930 ba26aeffd38d22f0ecde800c3f74425d 260 Pfam PF03741 Integral membrane protein TerC family 19 223 9.1E-52 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CJD35_RS06750 9fa9498511da12ec8d8917791a9a1dd5 87 Pfam PF11351 Holin of 3TMs, for gene-transfer release 1 77 1.6E-12 T 28-03-2018 IPR021497 Holin of 3TMs, for gene-transfer release CJD35_RS07565 0db28eb62dfa341c53ec0ccb4e8a8548 206 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 202 1.7E-52 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CJD35_RS07565 0db28eb62dfa341c53ec0ccb4e8a8548 206 Pfam PF01914 MarC family integral membrane protein 4 204 4.2E-53 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CJD35_RS01620 35c4ab7fa6e6b64c914871d6733c6d99 146 SUPERFAMILY SSF54637 36 139 8.36E-20 T 28-03-2018 IPR029069 HotDog domain CJD35_RS01620 35c4ab7fa6e6b64c914871d6733c6d99 146 Gene3D G3DSA:3.10.129.10 23 146 2.3E-18 T 28-03-2018 CJD35_RS01620 35c4ab7fa6e6b64c914871d6733c6d99 146 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 39 136 2.4E-10 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CJD35_RS01620 35c4ab7fa6e6b64c914871d6733c6d99 146 Pfam PF03061 Thioesterase superfamily 55 132 1.1E-8 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CJD35_RS03445 30d3715abfa18f2a564484a10380996c 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 20.191 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03445 30d3715abfa18f2a564484a10380996c 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.3E-25 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03445 30d3715abfa18f2a564484a10380996c 59 Pfam PF01783 Ribosomal L32p protein family 2 56 1.2E-26 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CJD35_RS03445 30d3715abfa18f2a564484a10380996c 59 SUPERFAMILY SSF57829 1 56 2.14E-22 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CJD35_RS02195 08b5095fc17e9d8a3560cf17541a252d 244 Gene3D G3DSA:3.40.50.150 1 243 4.0E-49 T 28-03-2018 CJD35_RS02195 08b5095fc17e9d8a3560cf17541a252d 244 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 243 35.032 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CJD35_RS02195 08b5095fc17e9d8a3560cf17541a252d 244 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 13 237 2.5E-70 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CJD35_RS02195 08b5095fc17e9d8a3560cf17541a252d 244 ProSitePatterns PS00163 Fumarate lyases signature. 29 38 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CJD35_RS02195 08b5095fc17e9d8a3560cf17541a252d 244 SUPERFAMILY SSF53335 19 225 1.74E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS02195 08b5095fc17e9d8a3560cf17541a252d 244 Pfam PF13489 Methyltransferase domain 64 213 2.3E-24 T 28-03-2018 CJD35_RS18960 9130180e0911e3674a930dcc7cbd315b 324 Pfam PF10686 Protein of unknown function (DUF2493) 202 267 8.3E-21 T 28-03-2018 IPR019627 Mycobacteriophage D29, Gp61 CJD35_RS18960 9130180e0911e3674a930dcc7cbd315b 324 Gene3D G3DSA:3.40.50.2300 222 321 0.002 T 28-03-2018 CJD35_RS14895 a7ece83d3b7131b37226656a9c98c458 281 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 29 176 2.4E-14 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CJD35_RS14895 a7ece83d3b7131b37226656a9c98c458 281 Gene3D G3DSA:3.40.50.300 4 212 4.0E-32 T 28-03-2018 CJD35_RS14895 a7ece83d3b7131b37226656a9c98c458 281 SUPERFAMILY SSF52540 7 233 1.59E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14895 a7ece83d3b7131b37226656a9c98c458 281 SMART SM00382 25 183 1.8E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CJD35_RS07205 f1131a4d6616f3d767f542fde087849a 446 Gene3D G3DSA:3.40.50.410 144 444 5.2E-14 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS07205 f1131a4d6616f3d767f542fde087849a 446 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 23 69 2.5E-8 T 28-03-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal CJD35_RS10620 3e7b6b3f5a59a6e295a461ac4a030cea 304 Gene3D G3DSA:3.40.50.720 2 304 3.1E-46 T 28-03-2018 CJD35_RS10620 3e7b6b3f5a59a6e295a461ac4a030cea 304 Pfam PF13460 NAD(P)H-binding 9 149 4.4E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10620 3e7b6b3f5a59a6e295a461ac4a030cea 304 SUPERFAMILY SSF51735 3 246 5.09E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS17850 83822360033b4bc45fa1f41322a61105 335 Gene3D G3DSA:3.50.50.60 3 281 1.9E-6 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS04335 9ed3a04e44572968fe9c1911d2b947e3 90 PIRSF PIRSF002599 3 90 3.5E-16 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CJD35_RS04335 9ed3a04e44572968fe9c1911d2b947e3 90 Pfam PF06961 Protein of unknown function (DUF1294) 15 69 6.6E-22 T 28-03-2018 IPR010718 Protein of unknown function DUF1294 CJD35_RS19580 d7ef886e4405b58b13949d4cc6bc5e5b 137 SUPERFAMILY SSF48076 7 136 4.97E-53 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit CJD35_RS19580 d7ef886e4405b58b13949d4cc6bc5e5b 137 Gene3D G3DSA:1.10.700.10 12 125 1.2E-46 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit CJD35_RS19580 d7ef886e4405b58b13949d4cc6bc5e5b 137 TIGRFAM TIGR02792 PCA_ligA: protocatechuate 4,5-dioxygenase, alpha subunit 15 131 4.9E-62 T 28-03-2018 IPR014159 Protocatechuate 4,5-dioxygenase, alpha subunit KEGG: 00362+1.13.11.8|KEGG: 00624+1.13.11.8|KEGG: 00627+1.13.11.8|MetaCyc: PWY-6216|MetaCyc: PWY-6217 CJD35_RS19580 d7ef886e4405b58b13949d4cc6bc5e5b 137 Pfam PF07746 Aromatic-ring-opening dioxygenase LigAB, LigA subunit 35 120 2.4E-35 T 28-03-2018 IPR011986 Extradiol ring-cleavage dioxygenase LigAB, LigA subunit CJD35_RS11485 22768e91817c47fb34b8c25d07163316 728 Pfam PF05876 Phage terminase large subunit (GpA) 48 619 2.5E-131 T 28-03-2018 IPR008866 Bacteriophage lambda, GpA CJD35_RS04840 c0b9b1edcdd0b2f4d9ecc1f11527ab89 221 SUPERFAMILY SSF52833 24 216 2.24E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS04840 c0b9b1edcdd0b2f4d9ecc1f11527ab89 221 Gene3D G3DSA:3.40.30.10 33 220 3.0E-32 T 28-03-2018 CJD35_RS04840 c0b9b1edcdd0b2f4d9ecc1f11527ab89 221 Pfam PF13462 Thioredoxin 34 216 3.9E-32 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS10375 c54acfbfa63e299c38b97c549cec92ac 42 Pfam PF08085 Entericidin EcnA/B family 21 41 1.5E-11 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 CJD35_RS12260 149d8fbbb4162c1d797215e9d7aafd95 154 SUPERFAMILY SSF55781 15 151 7.41E-16 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS12260 149d8fbbb4162c1d797215e9d7aafd95 154 Pfam PF01590 GAF domain 18 148 2.2E-6 T 28-03-2018 IPR003018 GAF domain GO:0005515 CJD35_RS12260 149d8fbbb4162c1d797215e9d7aafd95 154 Gene3D G3DSA:3.30.450.40 8 153 3.2E-13 T 28-03-2018 IPR029016 GAF domain-like CJD35_RS20370 1f7b416b6940133d5aea43efda6eaa16 596 Gene3D G3DSA:1.10.150.130 73 145 3.8E-5 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CJD35_RS20370 1f7b416b6940133d5aea43efda6eaa16 596 Gene3D G3DSA:1.10.443.10 256 432 0.0023 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CJD35_RS02405 5ea9d2b939eb7c508ee6b2cfcd23ba34 61 Pfam PF04328 Selenoprotein, putative 5 61 4.6E-26 T 28-03-2018 IPR007423 Selenoprotein, putative CJD35_RS07080 790968e54d72f9d53af0834044277d20 222 Pfam PF06149 Protein of unknown function (DUF969) 1 217 2.0E-88 T 28-03-2018 IPR010374 Protein of unknown function DUF969 CJD35_RS11285 069a576d164d644d43f24edc9f8a7f0b 533 SUPERFAMILY SSF52096 28 271 1.66E-69 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS11285 069a576d164d644d43f24edc9f8a7f0b 533 Pfam PF01039 Carboxyl transferase domain 50 522 1.8E-147 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CJD35_RS11285 069a576d164d644d43f24edc9f8a7f0b 533 SUPERFAMILY SSF52096 239 514 5.73E-84 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS11285 069a576d164d644d43f24edc9f8a7f0b 533 Gene3D G3DSA:3.90.226.10 276 528 5.8E-67 T 28-03-2018 CJD35_RS11285 069a576d164d644d43f24edc9f8a7f0b 533 Gene3D G3DSA:3.90.226.10 11 275 5.1E-68 T 28-03-2018 CJD35_RS14445 3c6af4863c2519fcc275a3fb251e047a 124 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 3 124 19.258 T 28-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 CJD35_RS14445 3c6af4863c2519fcc275a3fb251e047a 124 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 27 123 1.8E-37 T 28-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS02940 99d9e22badcae86dfc1795954c42c41a 615 Pfam PF01757 Acyltransferase family 5 323 2.0E-21 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CJD35_RS02940 99d9e22badcae86dfc1795954c42c41a 615 Gene3D G3DSA:3.40.50.1110 303 613 2.1E-9 T 28-03-2018 CJD35_RS00205 761968786482acaaef00e2d618d2244f 271 Pfam PF05673 Protein of unknown function (DUF815) 29 266 3.1E-79 T 28-03-2018 IPR008533 Domain of unknown function DUF815 CJD35_RS00205 761968786482acaaef00e2d618d2244f 271 Gene3D G3DSA:3.40.50.300 35 200 3.3E-10 T 28-03-2018 CJD35_RS00205 761968786482acaaef00e2d618d2244f 271 SUPERFAMILY SSF52540 39 261 1.16E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS14490 10cecdba2d5d65ec2a3ede004d74379f 402 Gene3D G3DSA:1.20.1250.20 200 393 2.3E-22 T 28-03-2018 CJD35_RS14490 10cecdba2d5d65ec2a3ede004d74379f 402 Pfam PF07690 Major Facilitator Superfamily 22 235 1.2E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS14490 10cecdba2d5d65ec2a3ede004d74379f 402 Gene3D G3DSA:1.20.1250.20 13 199 9.6E-29 T 28-03-2018 CJD35_RS14490 10cecdba2d5d65ec2a3ede004d74379f 402 SUPERFAMILY SSF103473 11 387 4.71E-59 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS19800 bc95fcf9fac929c6f90554c61b8dc4b9 935 Pfam PF07916 TraG-like protein, N-terminal region 3 459 4.1E-111 T 28-03-2018 IPR012931 TraG-like, N-terminal CJD35_RS11700 8b44ead1780a344ca2cdb82657f7d57f 215 Gene3D G3DSA:3.10.560.10 114 212 4.8E-25 T 28-03-2018 CJD35_RS11700 8b44ead1780a344ca2cdb82657f7d57f 215 Gene3D G3DSA:3.30.1950.10 54 113 2.1E-12 T 28-03-2018 CJD35_RS11700 8b44ead1780a344ca2cdb82657f7d57f 215 Pfam PF02563 Polysaccharide biosynthesis/export protein 47 118 2.7E-17 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CJD35_RS11700 8b44ead1780a344ca2cdb82657f7d57f 215 Pfam PF10531 SLBB domain 128 175 1.3E-6 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS10055 043e21b230e68ee6c162c182d34bba5e 206 Pfam PF13643 Domain of unknown function (DUF4145) 53 152 3.8E-17 T 28-03-2018 IPR025285 Domain of unknown function DUF4145 CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 187 0.0012 T 28-03-2018 CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 1.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 257 1.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 1.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 1.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.9E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 273 3.4E-50 T 28-03-2018 CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 Gene3D G3DSA:3.40.50.720 45 275 3.6E-58 T 28-03-2018 CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 Gene3D G3DSA:3.40.50.720 2 44 2.3E-10 T 28-03-2018 CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 SUPERFAMILY SSF51735 5 273 4.72E-75 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 9.0E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.0E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS15540 deadc62903f5d4ff225d7b5bec800b68 275 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 166 185 9.0E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CJD35_RS14360 46e9f1fc8be8fe883e8f7bbbf448ce4f 89 Pfam PF07330 Protein of unknown function (DUF1467) 1 83 3.4E-26 T 28-03-2018 IPR009935 Protein of unknown function DUF1467 CJD35_RS06615 b2a265a30a6f822a9871631feff2b4a2 298 Pfam PF00685 Sulfotransferase domain 40 245 1.2E-13 T 28-03-2018 IPR000863 Sulfotransferase domain GO:0008146 CJD35_RS06615 b2a265a30a6f822a9871631feff2b4a2 298 SUPERFAMILY SSF52540 20 295 4.56E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06615 b2a265a30a6f822a9871631feff2b4a2 298 Gene3D G3DSA:3.40.50.300 18 297 4.0E-45 T 28-03-2018 CJD35_RS02570 d410525c3324b38e4315d0abb3196e90 179 Gene3D G3DSA:1.20.910.10 2 178 4.4E-13 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CJD35_RS02570 d410525c3324b38e4315d0abb3196e90 179 SUPERFAMILY SSF48613 10 167 2.13E-25 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CJD35_RS21965 b3a0d9133c1e98a9e1f80d81d811d61b 278 Gene3D G3DSA:1.10.10.10 53 257 2.9E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS20855 fdf445f9435272709516d4b3501ece89 422 Pfam PF03743 Bacterial conjugation TrbI-like protein 241 410 8.5E-50 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CJD35_RS09875 c0d05bef3e63bd6d40967af757072748 329 Pfam PF14907 Uncharacterised nucleotidyltransferase 23 266 4.3E-40 T 28-03-2018 CJD35_RS04875 c53c95ed0511c8208e1e95f3eeddf38b 248 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 27 242 9.3E-32 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS04875 c53c95ed0511c8208e1e95f3eeddf38b 248 SUPERFAMILY SSF88697 13 79 1.54E-13 T 28-03-2018 IPR015947 PUA-like domain CJD35_RS04875 c53c95ed0511c8208e1e95f3eeddf38b 248 Pfam PF04452 RNA methyltransferase 29 241 1.5E-54 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS04875 c53c95ed0511c8208e1e95f3eeddf38b 248 SUPERFAMILY SSF75217 82 247 2.25E-45 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CJD35_RS04875 c53c95ed0511c8208e1e95f3eeddf38b 248 Gene3D G3DSA:3.40.1280.10 10 248 3.7E-68 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CJD35_RS04875 c53c95ed0511c8208e1e95f3eeddf38b 248 PIRSF PIRSF015601 11 247 5.5E-55 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CJD35_RS09405 5e7e1bf83bddddb612826b2eb8c127d8 348 Gene3D G3DSA:3.20.20.330 1 348 8.7E-112 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CJD35_RS09405 5e7e1bf83bddddb612826b2eb8c127d8 348 SUPERFAMILY SSF82282 7 347 1.11E-102 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CJD35_RS09405 5e7e1bf83bddddb612826b2eb8c127d8 348 Pfam PF02574 Homocysteine S-methyltransferase 16 321 7.0E-78 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CJD35_RS11380 0b12291c6cfc9bd852a91ce12507669a 227 Gene3D G3DSA:1.10.101.10 3 38 2.8E-4 T 28-03-2018 IPR002477 Peptidoglycan binding-like CJD35_RS11380 0b12291c6cfc9bd852a91ce12507669a 227 Gene3D G3DSA:1.10.530.10 46 224 5.2E-4 T 28-03-2018 CJD35_RS11380 0b12291c6cfc9bd852a91ce12507669a 227 Pfam PF11860 N-acetylmuramidase 61 224 9.8E-48 T 28-03-2018 IPR024408 N-acetylmuramidase CJD35_RS10795 6fe7b8f4fdbe5cf48413f385c7e1766b 1558 SUPERFAMILY SSF51735 904 1006 2.81E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10795 6fe7b8f4fdbe5cf48413f385c7e1766b 1558 SUPERFAMILY SSF51735 1042 1178 2.81E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS10795 6fe7b8f4fdbe5cf48413f385c7e1766b 1558 SUPERFAMILY SSF53223 726 915 4.03E-20 T 28-03-2018 CJD35_RS10795 6fe7b8f4fdbe5cf48413f385c7e1766b 1558 PIRSF PIRSF036761 6 1557 0.0 T 28-03-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 CJD35_RS10795 6fe7b8f4fdbe5cf48413f385c7e1766b 1558 Gene3D G3DSA:3.40.50.10860 752 879 0.0014 T 28-03-2018 CJD35_RS10795 6fe7b8f4fdbe5cf48413f385c7e1766b 1558 Gene3D G3DSA:3.40.50.720 897 1204 2.9E-52 T 28-03-2018 CJD35_RS10795 6fe7b8f4fdbe5cf48413f385c7e1766b 1558 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 70 1546 0.0 T 28-03-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 CJD35_RS16490 7ed4f8f5da754eed1564bbdae58a9bf9 309 Gene3D G3DSA:3.40.50.720 117 275 1.8E-35 T 28-03-2018 CJD35_RS16490 7ed4f8f5da754eed1564bbdae58a9bf9 309 SUPERFAMILY SSF51735 93 275 8.78E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CJD35_RS16490 7ed4f8f5da754eed1564bbdae58a9bf9 309 Gene3D G3DSA:3.40.50.720 1 116 1.7E-14 T 28-03-2018 CJD35_RS16490 7ed4f8f5da754eed1564bbdae58a9bf9 309 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 102 274 5.1E-45 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CJD35_RS08485 d2a1c068f9bb90947d15954f4f5535aa 288 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 150 162 - T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CJD35_RS08485 d2a1c068f9bb90947d15954f4f5535aa 288 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 22 269 3.7E-76 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CJD35_RS08485 d2a1c068f9bb90947d15954f4f5535aa 288 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 19 275 18.242 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CJD35_RS08485 d2a1c068f9bb90947d15954f4f5535aa 288 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 22 275 1.9E-71 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CJD35_RS07885 06a08fc726332904cb3b1c978e2d5f86 140 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 33 137 4.5E-17 T 28-03-2018 IPR019223 Domain of unknown function DUF2147 CJD35_RS00690 74ed5ecaf470a81e5dc439ab69339ac8 231 SUPERFAMILY SSF53955 52 217 3.94E-51 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS00690 74ed5ecaf470a81e5dc439ab69339ac8 231 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 14 222 2.7E-68 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CJD35_RS00690 74ed5ecaf470a81e5dc439ab69339ac8 231 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 10 224 36.977 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CJD35_RS00690 74ed5ecaf470a81e5dc439ab69339ac8 231 Pfam PF00912 Transglycosylase 55 200 4.5E-42 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CJD35_RS00690 74ed5ecaf470a81e5dc439ab69339ac8 231 Gene3D G3DSA:1.10.3810.10 46 222 3.2E-47 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CJD35_RS19755 03548d358bba9b5a5e985599a8ce48e9 229 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 37 138 1.2E-32 T 28-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CJD35_RS20480 e8750dc242f5aee51a1790a4cac2af22 800 SUPERFAMILY SSF56935 530 800 1.72E-114 T 28-03-2018 CJD35_RS20480 e8750dc242f5aee51a1790a4cac2af22 800 SUPERFAMILY SSF56935 55 481 1.72E-114 T 28-03-2018 CJD35_RS20480 e8750dc242f5aee51a1790a4cac2af22 800 Gene3D G3DSA:2.40.170.20 192 800 3.9E-72 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS20480 e8750dc242f5aee51a1790a4cac2af22 800 Pfam PF00593 TonB dependent receptor 300 799 3.9E-38 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS20480 e8750dc242f5aee51a1790a4cac2af22 800 Gene3D G3DSA:2.170.130.10 49 191 1.9E-21 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS20480 e8750dc242f5aee51a1790a4cac2af22 800 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 181 6.5E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS02400 11fe65309b741329bb9d81de762da642 682 Pfam PF02554 Carbon starvation protein CstA 29 404 1.6E-160 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CJD35_RS02400 11fe65309b741329bb9d81de762da642 682 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 461 588 2.2E-33 T 28-03-2018 IPR025299 CstA, C-terminal domain CJD35_RS15970 6d1718e83a1e88a810ccbc3a46fecb77 376 Gene3D G3DSA:2.60.120.600 187 338 1.9E-10 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 CJD35_RS15970 6d1718e83a1e88a810ccbc3a46fecb77 376 Gene3D G3DSA:2.60.120.600 61 160 1.5E-4 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 SUPERFAMILY SSF49503 25 133 7.12E-26 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 TIGRFAM TIGR02375 pseudoazurin: pseudoazurin 30 146 1.8E-43 T 28-03-2018 IPR012745 Pseudoazurin GO:0005507 CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 29 115 1.7E-14 T 28-03-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 Gene3D G3DSA:2.60.40.420 24 147 4.6E-18 T 28-03-2018 IPR008972 Cupredoxin CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 PRINTS PR00155 Amicyanin family signature 61 76 9.4E-30 T 28-03-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 PRINTS PR00155 Amicyanin family signature 98 113 9.4E-30 T 28-03-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 PRINTS PR00155 Amicyanin family signature 41 60 9.4E-30 T 28-03-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 PRINTS PR00155 Amicyanin family signature 82 97 9.4E-30 T 28-03-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 PRINTS PR00155 Amicyanin family signature 25 40 9.4E-30 T 28-03-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 PRINTS PR00156 Type I copper blue protein family signature 47 60 5.8E-13 T 28-03-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 PRINTS PR00156 Type I copper blue protein family signature 93 107 5.8E-13 T 28-03-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 CJD35_RS06180 3291a0521c3a4437f313658cef37294e 147 PRINTS PR00156 Type I copper blue protein family signature 61 76 5.8E-13 T 28-03-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 CJD35_RS03235 b629a5405dc77e32ca30c1795692ddcc 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 5 261 9.3E-109 T 28-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CJD35_RS03235 b629a5405dc77e32ca30c1795692ddcc 262 Pfam PF00460 Flagella basal body rod protein 6 36 1.3E-11 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJD35_RS03235 b629a5405dc77e32ca30c1795692ddcc 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 137 1.8E-46 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CJD35_RS03235 b629a5405dc77e32ca30c1795692ddcc 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 144 244 1.1E-32 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CJD35_RS03235 b629a5405dc77e32ca30c1795692ddcc 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 1.5E-24 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJD35_RS03235 b629a5405dc77e32ca30c1795692ddcc 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 12 32 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CJD35_RS03235 b629a5405dc77e32ca30c1795692ddcc 262 SUPERFAMILY SSF117143 94 223 5.49E-37 T 28-03-2018 CJD35_RS16905 639f6aa0d628b3fe193f7ee5ac9718bb 143 Gene3D G3DSA:1.20.1600.10 18 140 3.1E-17 T 28-03-2018 CJD35_RS16905 639f6aa0d628b3fe193f7ee5ac9718bb 143 Pfam PF02321 Outer membrane efflux protein 61 124 8.3E-8 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS16905 639f6aa0d628b3fe193f7ee5ac9718bb 143 SUPERFAMILY SSF56954 1 136 1.15E-19 T 28-03-2018 CJD35_RS10645 12c8a5ad174de38c78fa8b15803575f9 176 Gene3D G3DSA:3.40.630.30 1 173 2.0E-23 T 28-03-2018 CJD35_RS10645 12c8a5ad174de38c78fa8b15803575f9 176 SUPERFAMILY SSF55729 1 157 3.36E-37 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS10645 12c8a5ad174de38c78fa8b15803575f9 176 Pfam PF13302 Acetyltransferase (GNAT) domain 11 153 4.0E-27 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CJD35_RS10160 aa8ecdc679918a8415bb5880eff33125 182 PIRSF PIRSF005859 10 168 6.9E-43 T 28-03-2018 IPR004307 TspO/MBR-related protein GO:0016021 CJD35_RS10160 aa8ecdc679918a8415bb5880eff33125 182 Pfam PF03073 TspO/MBR family 24 163 2.6E-41 T 28-03-2018 IPR004307 TspO/MBR-related protein GO:0016021 CJD35_RS10590 cb3873ad482b61adaf2e97227e495277 95 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 4 93 3.3E-29 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CJD35_RS10590 cb3873ad482b61adaf2e97227e495277 95 SUPERFAMILY SSF55248 1 94 1.7E-33 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CJD35_RS10590 cb3873ad482b61adaf2e97227e495277 95 Gene3D G3DSA:3.30.1360.20 3 95 5.8E-33 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CJD35_RS10590 cb3873ad482b61adaf2e97227e495277 95 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 2 95 23.965 T 28-03-2018 IPR001533 Transcriptional coactivator/pterin dehydratase GO:0006729|GO:0008124 MetaCyc: PWY-7158 CJD35_RS10235 583007f8c74cd5c8f34495ab1123f560 158 Gene3D G3DSA:1.10.490.10 44 158 1.6E-25 T 28-03-2018 CJD35_RS10235 583007f8c74cd5c8f34495ab1123f560 158 SUPERFAMILY SSF46458 46 156 1.18E-26 T 28-03-2018 IPR009050 Globin-like CJD35_RS10235 583007f8c74cd5c8f34495ab1123f560 158 Pfam PF01152 Bacterial-like globin 47 155 5.2E-10 T 28-03-2018 IPR001486 Truncated hemoglobin GO:0019825 CJD35_RS04590 1c8b023fe9e63d964cae73713712da74 495 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 336 471 4.6E-12 T 28-03-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CJD35_RS04590 1c8b023fe9e63d964cae73713712da74 495 Pfam PF13440 Polysaccharide biosynthesis protein 43 333 1.2E-67 T 28-03-2018 CJD35_RS19795 f14c14e1f2bcc80e14d72cccb67ba1cd 466 Pfam PF06122 Conjugative relaxosome accessory transposon protein 21 379 4.3E-112 T 28-03-2018 IPR010927 Type IV conjugative transfer system protein TraH CJD35_RS15320 dc799f8ea461e5ab4c1f91cb1ee42c5a 121 Gene3D G3DSA:3.10.450.50 1 120 1.1E-10 T 28-03-2018 CJD35_RS15320 dc799f8ea461e5ab4c1f91cb1ee42c5a 121 SUPERFAMILY SSF54427 10 113 9.53E-10 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS12875 a7fe640bf0f92768683ea3d3cc63fe29 409 Gene3D G3DSA:3.40.50.150 3 397 2.4E-20 T 28-03-2018 CJD35_RS12875 a7fe640bf0f92768683ea3d3cc63fe29 409 Pfam PF11899 Protein of unknown function (DUF3419) 29 404 4.3E-112 T 28-03-2018 IPR021829 Protein of unknown function DUF3419 CJD35_RS12875 a7fe640bf0f92768683ea3d3cc63fe29 409 SUPERFAMILY SSF53335 288 377 3.34E-7 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS02215 abd13fe26cb8f7775e7d87ad82a11b18 105 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 90 9.4E-10 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS02215 abd13fe26cb8f7775e7d87ad82a11b18 105 Gene3D G3DSA:3.10.20.30 2 105 5.2E-27 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS02215 abd13fe26cb8f7775e7d87ad82a11b18 105 PRINTS PR00355 Adrenodoxin signature 82 90 1.7E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS02215 abd13fe26cb8f7775e7d87ad82a11b18 105 PRINTS PR00355 Adrenodoxin signature 59 73 1.7E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS02215 abd13fe26cb8f7775e7d87ad82a11b18 105 PRINTS PR00355 Adrenodoxin signature 40 50 1.7E-10 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS02215 abd13fe26cb8f7775e7d87ad82a11b18 105 SUPERFAMILY SSF54292 3 101 3.79E-29 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS19535 1d5366ed6c368244228d9b74b4019fd7 216 SUPERFAMILY SSF53448 6 188 1.42E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS19535 1d5366ed6c368244228d9b74b4019fd7 216 Gene3D G3DSA:3.90.550.10 2 199 4.8E-34 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS19535 1d5366ed6c368244228d9b74b4019fd7 216 Pfam PF12804 MobA-like NTP transferase domain 8 164 2.1E-35 T 28-03-2018 IPR025877 MobA-like NTP transferase CJD35_RS18540 7342578661f399e32958799b0750428b 333 SUPERFAMILY SSF53955 142 300 2.96E-37 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS18540 7342578661f399e32958799b0750428b 333 Gene3D G3DSA:1.10.530.10 147 302 2.6E-35 T 28-03-2018 CJD35_RS18540 7342578661f399e32958799b0750428b 333 Pfam PF01464 Transglycosylase SLT domain 186 276 1.4E-20 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CJD35_RS12355 d7d6b9c98494a67526ddc088ba8d00a2 115 Pfam PF06108 Protein of unknown function (DUF952) 10 96 5.4E-28 T 28-03-2018 IPR009297 Protein of unknown function DUF952 CJD35_RS12355 d7d6b9c98494a67526ddc088ba8d00a2 115 SUPERFAMILY SSF56399 5 113 7.77E-36 T 28-03-2018 CJD35_RS07455 fc896a70bb98205981f44bf6925624dc 230 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 17 225 1.7E-59 T 28-03-2018 IPR006214 Bax inhibitor 1-related CJD35_RS05220 901dabdbe13218e5e96cbecabc06b40d 622 TIGRFAM TIGR04141 TIGR04141: sporadically distributed protein, TIGR04141 family 7 539 4.1E-124 T 28-03-2018 IPR026487 Sporadically distributed protein CHP04141 CJD35_RS15235 6b1474b472ae8dab96cdd2ae802c2fd4 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 5.1E-11 T 28-03-2018 CJD35_RS15235 6b1474b472ae8dab96cdd2ae802c2fd4 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 5.1E-11 T 28-03-2018 CJD35_RS15235 6b1474b472ae8dab96cdd2ae802c2fd4 410 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 5.1E-11 T 28-03-2018 CJD35_RS15235 6b1474b472ae8dab96cdd2ae802c2fd4 410 Gene3D G3DSA:3.50.50.60 4 344 1.8E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15235 6b1474b472ae8dab96cdd2ae802c2fd4 410 Pfam PF01494 FAD binding domain 6 318 1.1E-18 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CJD35_RS15235 6b1474b472ae8dab96cdd2ae802c2fd4 410 SUPERFAMILY SSF51905 5 170 6.05E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15235 6b1474b472ae8dab96cdd2ae802c2fd4 410 SUPERFAMILY SSF51905 268 375 6.05E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS00390 7e958845e7927e70f052694973e17aa5 439 Pfam PF03237 Terminase-like family 55 256 9.7E-16 T 28-03-2018 CJD35_RS00390 7e958845e7927e70f052694973e17aa5 439 Pfam PF17289 Terminase RNaseH-like domain 278 424 5.0E-16 T 28-03-2018 IPR035421 Terminase, large subunit gp17-like CJD35_RS00390 7e958845e7927e70f052694973e17aa5 439 Gene3D G3DSA:3.30.429.10 200 250 0.077 T 28-03-2018 CJD35_RS17220 2777d318bb783f8fca39e5b20e519097 182 Gene3D G3DSA:2.40.160.20 31 180 3.5E-32 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS17220 2777d318bb783f8fca39e5b20e519097 182 Pfam PF11578 Protein of unknown function (DUF3237) 39 177 6.5E-23 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS17220 2777d318bb783f8fca39e5b20e519097 182 Hamap MF_00775 UPF0311 protein . 39 180 20.503 T 28-03-2018 IPR020915 Uncharacterised protein family UPF0311 CJD35_RS19295 87fc8cd0e99eade1db7e2a5e71dba30a 287 Gene3D G3DSA:3.40.1360.10 177 285 2.4E-10 T 28-03-2018 CJD35_RS19295 87fc8cd0e99eade1db7e2a5e71dba30a 287 Pfam PF13362 Toprim domain 189 276 2.3E-13 T 28-03-2018 IPR006171 TOPRIM domain CJD35_RS19295 87fc8cd0e99eade1db7e2a5e71dba30a 287 Gene3D G3DSA:3.90.580.10 4 79 3.8E-4 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CJD35_RS16665 b8548753fbc9f3128766a675d064d4a4 488 Gene3D G3DSA:3.40.309.10 277 470 8.0E-70 T 28-03-2018 CJD35_RS16665 b8548753fbc9f3128766a675d064d4a4 488 Pfam PF00171 Aldehyde dehydrogenase family 20 484 5.1E-164 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS16665 b8548753fbc9f3128766a675d064d4a4 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS16665 b8548753fbc9f3128766a675d064d4a4 488 SUPERFAMILY SSF53720 12 486 1.06E-161 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CJD35_RS16665 b8548753fbc9f3128766a675d064d4a4 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 286 297 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CJD35_RS16665 b8548753fbc9f3128766a675d064d4a4 488 Gene3D G3DSA:3.40.605.10 6 276 1.1E-100 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CJD35_RS21940 86dcc09008c04654d706d7eb75ed36b9 174 Gene3D G3DSA:1.10.1220.10 44 95 0.0019 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS21940 86dcc09008c04654d706d7eb75ed36b9 174 Gene3D G3DSA:1.10.1220.10 2 38 0.33 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS09185 ff8d737c7a808658cf5497713366b6c9 208 Pfam PF04279 Intracellular septation protein A 18 188 5.5E-55 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CJD35_RS09185 ff8d737c7a808658cf5497713366b6c9 208 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 16 191 17.75 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CJD35_RS09185 ff8d737c7a808658cf5497713366b6c9 208 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 18 189 1.4E-55 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CJD35_RS13265 60fb8f7b63a3b65db2b2b673e2647f0c 111 SUPERFAMILY SSF102829 5 78 1.96E-15 T 28-03-2018 IPR007838 Cell division protein ZapA-like CJD35_RS13265 60fb8f7b63a3b65db2b2b673e2647f0c 111 Pfam PF05164 Cell division protein ZapA 5 97 8.9E-17 T 28-03-2018 IPR007838 Cell division protein ZapA-like CJD35_RS08985 01ae5b1c8bd895676acaada9eb96a5cc 132 Pfam PF05071 NADH ubiquinone oxidoreductase subunit NDUFA12 26 129 4.6E-22 T 28-03-2018 IPR007763 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 GO:0008137|GO:0009055|GO:0016020 Reactome: R-HSA-6799198 CJD35_RS10400 3282de1313f9c72f71a64defd84fb283 165 SUPERFAMILY SSF89447 7 139 1.67E-16 T 28-03-2018 CJD35_RS10400 3282de1313f9c72f71a64defd84fb283 165 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 6 133 3.0E-6 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CJD35_RS06965 eab460e97c45ff2c618fe8b8dc5dc5b1 74 Pfam PF13340 Putative transposase of IS4/5 family (DUF4096) 7 72 2.7E-16 T 28-03-2018 IPR025161 Putative transposase IS4/IS5 family CJD35_RS15280 2bb2d1ee1a36e847d5a9b8c054ce47e3 638 Pfam PF12969 Domain of Unknown Function with PDB structure (DUF3857) 29 161 8.9E-12 T 28-03-2018 IPR024618 Domain of unknown function DUF3857 CJD35_RS15280 2bb2d1ee1a36e847d5a9b8c054ce47e3 638 SUPERFAMILY SSF54001 232 360 2.4E-10 T 28-03-2018 CJD35_RS15280 2bb2d1ee1a36e847d5a9b8c054ce47e3 638 Pfam PF01841 Transglutaminase-like superfamily 238 324 1.3E-6 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS01410 c86c651fe46ee2e0bb7b0b56e371186c 56 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 50 3.4E-8 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CJD35_RS03300 e10ad830fcbe6361f313cb847e6d8ae0 555 ProSitePatterns PS00018 EF-hand calcium-binding domain. 277 289 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site CJD35_RS03300 e10ad830fcbe6361f313cb847e6d8ae0 555 SUPERFAMILY SSF52129 30 109 2.72E-5 T 28-03-2018 IPR029030 Caspase-like domain CJD35_RS03300 e10ad830fcbe6361f313cb847e6d8ae0 555 Pfam PF00656 Caspase domain 31 246 1.6E-11 T 28-03-2018 CJD35_RS03300 e10ad830fcbe6361f313cb847e6d8ae0 555 Gene3D G3DSA:3.40.50.1460 27 308 3.6E-32 T 28-03-2018 CJD35_RS02515 1317e06831dd47b9dd18933d07409612 327 PIRSF PIRSF004532 8 327 3.2E-135 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CJD35_RS02515 1317e06831dd47b9dd18933d07409612 327 SUPERFAMILY SSF56655 8 323 5.19E-101 T 28-03-2018 CJD35_RS02515 1317e06831dd47b9dd18933d07409612 327 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 9 326 2.1E-104 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CJD35_RS02515 1317e06831dd47b9dd18933d07409612 327 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 11 320 1.6E-134 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CJD35_RS02515 1317e06831dd47b9dd18933d07409612 327 Gene3D G3DSA:3.30.540.10 6 160 2.3E-50 T 28-03-2018 CJD35_RS02515 1317e06831dd47b9dd18933d07409612 327 Gene3D G3DSA:3.30.540.10 162 327 1.1E-52 T 28-03-2018 CJD35_RS09390 c5659025756acd8e7485060955f4b8a9 71 Gene3D G3DSA:1.10.287.700 11 71 2.5E-5 T 28-03-2018 CJD35_RS15900 0a2cb689f89b694edc94b118cd561088 125 Gene3D G3DSA:3.20.20.140 66 125 2.3E-18 T 28-03-2018 CJD35_RS15900 0a2cb689f89b694edc94b118cd561088 125 SUPERFAMILY SSF51338 4 101 1.58E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS15900 0a2cb689f89b694edc94b118cd561088 125 Pfam PF07969 Amidohydrolase family 45 117 2.5E-13 T 28-03-2018 IPR013108 Amidohydrolase 3 CJD35_RS15900 0a2cb689f89b694edc94b118cd561088 125 Gene3D G3DSA:2.30.40.10 1 65 1.2E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CJD35_RS00840 bb6aa7e1349d36ca79393c9a2ab00c10 257 Pfam PF01925 Sulfite exporter TauE/SafE 15 246 4.3E-40 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CJD35_RS03815 451a96740bb70b8a6d28e3ab6edd6af6 507 SUPERFAMILY SSF51971 7 326 9.65E-45 T 28-03-2018 CJD35_RS03815 451a96740bb70b8a6d28e3ab6edd6af6 507 SUPERFAMILY SSF51971 428 470 9.65E-45 T 28-03-2018 CJD35_RS03815 451a96740bb70b8a6d28e3ab6edd6af6 507 Gene3D G3DSA:3.40.50.720 6 467 1.2E-40 T 28-03-2018 CJD35_RS03815 451a96740bb70b8a6d28e3ab6edd6af6 507 PRINTS PR00419 Adrenodoxin reductase family signature 9 31 1.2E-6 T 28-03-2018 CJD35_RS03815 451a96740bb70b8a6d28e3ab6edd6af6 507 PRINTS PR00419 Adrenodoxin reductase family signature 32 45 1.2E-6 T 28-03-2018 CJD35_RS03815 451a96740bb70b8a6d28e3ab6edd6af6 507 Pfam PF13450 NAD(P)-binding Rossmann-like domain 12 77 3.2E-16 T 28-03-2018 CJD35_RS07890 0fb79eae1ffebe378452c725aa881951 261 SUPERFAMILY SSF53474 58 248 8.33E-12 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS07890 0fb79eae1ffebe378452c725aa881951 261 Pfam PF06057 Bacterial virulence protein (VirJ) 68 248 3.1E-30 T 28-03-2018 IPR010333 Bacterial virulence CJD35_RS07890 0fb79eae1ffebe378452c725aa881951 261 Gene3D G3DSA:3.40.50.1820 51 256 8.7E-11 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS02170 31cc7f8fbc2dee940fdec07b4cf05cfd 265 SUPERFAMILY SSF54593 132 258 5.78E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS02170 31cc7f8fbc2dee940fdec07b4cf05cfd 265 Gene3D G3DSA:3.10.180.10 145 265 1.1E-15 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS02170 31cc7f8fbc2dee940fdec07b4cf05cfd 265 Gene3D G3DSA:3.10.180.10 1 126 1.6E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS02170 31cc7f8fbc2dee940fdec07b4cf05cfd 265 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 139 255 2.8E-5 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CJD35_RS02170 31cc7f8fbc2dee940fdec07b4cf05cfd 265 SUPERFAMILY SSF54593 8 174 8.24E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CJD35_RS03895 c7cef867344affaf96042e88039127ad 293 SUPERFAMILY SSF103481 194 292 2.35E-11 T 28-03-2018 CJD35_RS03895 c7cef867344affaf96042e88039127ad 293 Pfam PF00892 EamA-like transporter family 158 287 2.0E-13 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS03895 c7cef867344affaf96042e88039127ad 293 Pfam PF00892 EamA-like transporter family 21 144 4.7E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CJD35_RS03895 c7cef867344affaf96042e88039127ad 293 SUPERFAMILY SSF103481 47 148 1.05E-10 T 28-03-2018 CJD35_RS02605 585d868964edaba59969236a21f39fc2 180 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 71 3.2E-8 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CJD35_RS02605 585d868964edaba59969236a21f39fc2 180 Gene3D G3DSA:3.40.50.1240 1 170 1.1E-25 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CJD35_RS02605 585d868964edaba59969236a21f39fc2 180 SUPERFAMILY SSF53254 1 170 2.88E-26 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CJD35_RS11460 4807d4092e3c4e4c2a9764ce6933b77f 111 PIRSF PIRSF030771 1 108 4.2E-16 T 28-03-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 CJD35_RS11460 4807d4092e3c4e4c2a9764ce6933b77f 111 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 3 106 6.7E-32 T 28-03-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 CJD35_RS10780 f04646e54328121fd6e455a7b9b03014 198 Pfam PF01695 IstB-like ATP binding protein 55 188 2.4E-31 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CJD35_RS10780 f04646e54328121fd6e455a7b9b03014 198 Gene3D G3DSA:3.40.50.300 67 198 2.4E-13 T 28-03-2018 CJD35_RS10780 f04646e54328121fd6e455a7b9b03014 198 SUPERFAMILY SSF52540 71 196 4.46E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05210 0abcdc5011295055295b06cddbb7d45f 218 Pfam PF01863 Protein of unknown function DUF45 1 208 3.2E-55 T 28-03-2018 IPR002725 Protein of unknown function DUF45 CJD35_RS16830 80162841a3721dd841b9e9af3618d81c 298 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 10 270 3.7E-80 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CJD35_RS16830 80162841a3721dd841b9e9af3618d81c 298 Gene3D G3DSA:3.40.830.10 1 294 1.1E-56 T 28-03-2018 CJD35_RS16830 80162841a3721dd841b9e9af3618d81c 298 SUPERFAMILY SSF53213 2 278 1.96E-96 T 28-03-2018 CJD35_RS05600 a44a3e0288cbb3dcca46c0e37abaf404 123 SUPERFAMILY SSF50630 20 113 2.46E-6 T 28-03-2018 IPR021109 Aspartic peptidase domain CJD35_RS05600 a44a3e0288cbb3dcca46c0e37abaf404 123 Gene3D G3DSA:2.40.70.10 13 118 3.7E-8 T 28-03-2018 IPR021109 Aspartic peptidase domain CJD35_RS18575 2e6df8a29b35cad3378b8af1a0ac96f9 443 Gene3D G3DSA:1.20.58.130 98 164 7.6E-4 T 28-03-2018 CJD35_RS18575 2e6df8a29b35cad3378b8af1a0ac96f9 443 Pfam PF03743 Bacterial conjugation TrbI-like protein 234 439 2.7E-29 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CJD35_RS01890 001ebe09bf79d2494e0cbe855d9383a8 529 Pfam PF03354 Phage Terminase 61 514 1.7E-53 T 28-03-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type CJD35_RS11135 a48d30d57f9a6384056d9f474e63ab36 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 265 1.7E-56 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS11135 a48d30d57f9a6384056d9f474e63ab36 266 SUPERFAMILY SSF52096 2 265 3.81E-79 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS11135 a48d30d57f9a6384056d9f474e63ab36 266 Gene3D G3DSA:3.90.226.10 3 223 1.0E-60 T 28-03-2018 CJD35_RS11135 a48d30d57f9a6384056d9f474e63ab36 266 Gene3D G3DSA:1.10.12.10 224 265 3.3E-13 T 28-03-2018 IPR014748 Crontonase, C-terminal CJD35_RS20760 736c010e8c5c56df94bcdcc42ba1c38c 254 SUPERFAMILY SSF53098 72 192 1.29E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS20760 736c010e8c5c56df94bcdcc42ba1c38c 254 Gene3D G3DSA:3.30.420.10 62 209 2.6E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CJD35_RS20760 736c010e8c5c56df94bcdcc42ba1c38c 254 Pfam PF13610 DDE domain 73 211 3.9E-50 T 28-03-2018 IPR032874 DDE domain CJD35_RS15435 94c894580a6fbf04ff0cc4af0473e134 105 Gene3D G3DSA:3.10.20.30 2 105 3.4E-26 T 28-03-2018 IPR012675 Beta-grasp domain CJD35_RS15435 94c894580a6fbf04ff0cc4af0473e134 105 SUPERFAMILY SSF54292 5 101 1.97E-27 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS15435 94c894580a6fbf04ff0cc4af0473e134 105 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 91 7.2E-11 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CJD35_RS15435 94c894580a6fbf04ff0cc4af0473e134 105 PRINTS PR00355 Adrenodoxin signature 59 73 1.1E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS15435 94c894580a6fbf04ff0cc4af0473e134 105 PRINTS PR00355 Adrenodoxin signature 40 50 1.1E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS15435 94c894580a6fbf04ff0cc4af0473e134 105 PRINTS PR00355 Adrenodoxin signature 82 90 1.1E-9 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CJD35_RS06605 d8df58de0b8da8d7dfec1a3f7f99af1c 265 Gene3D G3DSA:3.20.20.70 98 230 1.0E-6 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS06605 d8df58de0b8da8d7dfec1a3f7f99af1c 265 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 75 246 2.1E-34 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CJD35_RS06605 d8df58de0b8da8d7dfec1a3f7f99af1c 265 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 76 245 3.0E-54 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CJD35_RS03140 7d4ed411d4ff17d39022c3c6bb5b9c1b 581 Pfam PF01514 Secretory protein of YscJ/FliF family 58 245 7.0E-54 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF CJD35_RS03140 7d4ed411d4ff17d39022c3c6bb5b9c1b 581 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 69 575 1.1E-68 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJD35_RS03140 7d4ed411d4ff17d39022c3c6bb5b9c1b 581 PIRSF PIRSF004862 29 578 4.0E-136 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJD35_RS03140 7d4ed411d4ff17d39022c3c6bb5b9c1b 581 Pfam PF08345 Flagellar M-ring protein C-terminal 275 452 2.9E-36 T 28-03-2018 IPR013556 Flagellar M-ring C-terminal CJD35_RS03140 7d4ed411d4ff17d39022c3c6bb5b9c1b 581 PRINTS PR01009 Flagellar M-ring protein signature 384 408 2.3E-22 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJD35_RS03140 7d4ed411d4ff17d39022c3c6bb5b9c1b 581 PRINTS PR01009 Flagellar M-ring protein signature 146 164 2.3E-22 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJD35_RS03140 7d4ed411d4ff17d39022c3c6bb5b9c1b 581 PRINTS PR01009 Flagellar M-ring protein signature 221 239 2.3E-22 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJD35_RS03140 7d4ed411d4ff17d39022c3c6bb5b9c1b 581 PRINTS PR01009 Flagellar M-ring protein signature 288 306 2.3E-22 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJD35_RS03140 7d4ed411d4ff17d39022c3c6bb5b9c1b 581 PRINTS PR01009 Flagellar M-ring protein signature 178 192 2.3E-22 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CJD35_RS03140 7d4ed411d4ff17d39022c3c6bb5b9c1b 581 Gene3D G3DSA:3.30.70.1530 78 139 1.5E-6 T 28-03-2018 CJD35_RS10060 18e527ff29ace4bbd2409de24495e7ec 38 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 1 34 1.5E-6 T 28-03-2018 IPR024455 Phage capsid CJD35_RS06335 6652442bd2de4bd9f85ee6f528c4e260 235 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 215 3.8E-73 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CJD35_RS06335 6652442bd2de4bd9f85ee6f528c4e260 235 Gene3D G3DSA:3.40.1080.10 1 235 6.5E-94 T 28-03-2018 CJD35_RS06335 6652442bd2de4bd9f85ee6f528c4e260 235 SMART SM00882 5 217 3.9E-88 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS06335 6652442bd2de4bd9f85ee6f528c4e260 235 SUPERFAMILY SSF100950 3 229 5.37E-86 T 28-03-2018 CJD35_RS06335 6652442bd2de4bd9f85ee6f528c4e260 235 Pfam PF01144 Coenzyme A transferase 6 215 9.6E-78 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CJD35_RS03100 1295ca8f7b9c4b0603f0c684de16eab7 111 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 29 98 5.3E-24 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CJD35_RS03100 1295ca8f7b9c4b0603f0c684de16eab7 111 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 26 100 1.0E-29 T 28-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CJD35_RS03100 1295ca8f7b9c4b0603f0c684de16eab7 111 PRINTS PR00956 Flagellar motor switch protein FliN signature 45 61 7.6E-23 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJD35_RS03100 1295ca8f7b9c4b0603f0c684de16eab7 111 PRINTS PR00956 Flagellar motor switch protein FliN signature 74 89 7.6E-23 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJD35_RS03100 1295ca8f7b9c4b0603f0c684de16eab7 111 PRINTS PR00956 Flagellar motor switch protein FliN signature 61 74 7.6E-23 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJD35_RS03100 1295ca8f7b9c4b0603f0c684de16eab7 111 PRINTS PR00956 Flagellar motor switch protein FliN signature 28 44 7.6E-23 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CJD35_RS03100 1295ca8f7b9c4b0603f0c684de16eab7 111 SUPERFAMILY SSF101801 26 105 1.44E-22 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CJD35_RS03100 1295ca8f7b9c4b0603f0c684de16eab7 111 Gene3D G3DSA:2.30.330.10 15 109 1.2E-26 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CJD35_RS06235 10c83298ec8027f2f447f8eec45e3471 362 Gene3D G3DSA:3.20.20.30 1 355 8.7E-63 T 28-03-2018 CJD35_RS06235 10c83298ec8027f2f447f8eec45e3471 362 SUPERFAMILY SSF51679 1 354 4.36E-65 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS06235 10c83298ec8027f2f447f8eec45e3471 362 Pfam PF00296 Luciferase-like monooxygenase 1 313 1.2E-43 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS02100 bc872620dfa4b904aa45a9ce79810fc4 122 Pfam PF03965 Penicillinase repressor 5 118 5.1E-35 T 28-03-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CJD35_RS02100 bc872620dfa4b904aa45a9ce79810fc4 122 Gene3D G3DSA:1.10.10.10 6 68 4.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02100 bc872620dfa4b904aa45a9ce79810fc4 122 SUPERFAMILY SSF46785 3 120 1.8E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02100 bc872620dfa4b904aa45a9ce79810fc4 122 PIRSF PIRSF019455 1 122 3.0E-38 T 28-03-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 CJD35_RS02100 bc872620dfa4b904aa45a9ce79810fc4 122 Gene3D G3DSA:1.10.4040.10 70 118 2.7E-16 T 28-03-2018 CJD35_RS14485 0448314cd7d1432761af6f4cd15cc887 227 SUPERFAMILY SSF141523 102 212 4.58E-26 T 28-03-2018 CJD35_RS14485 0448314cd7d1432761af6f4cd15cc887 227 Pfam PF03734 L,D-transpeptidase catalytic domain 105 212 1.8E-14 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CJD35_RS14485 0448314cd7d1432761af6f4cd15cc887 227 Gene3D G3DSA:2.40.440.10 97 214 2.1E-20 T 28-03-2018 CJD35_RS03380 fb8f547bba64932b5aa398e95e17b966 132 PIRSF PIRSF032025 1 132 3.7E-29 T 28-03-2018 IPR008320 Uncharacterised conserved protein UCP032025 CJD35_RS03380 fb8f547bba64932b5aa398e95e17b966 132 Pfam PF07370 Protein of unknown function (DUF1489) 5 132 9.2E-41 T 28-03-2018 IPR008320 Uncharacterised conserved protein UCP032025 CJD35_RS15580 6fa977a16430601a57afd84ddf9092b9 283 SUPERFAMILY SSF56529 62 281 3.79E-75 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS15580 6fa977a16430601a57afd84ddf9092b9 283 Gene3D G3DSA:3.90.850.10 32 283 2.0E-70 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS15580 6fa977a16430601a57afd84ddf9092b9 283 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 75 280 5.5E-59 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CJD35_RS18720 13f2616a753661902f92545b231bf7d9 259 SUPERFAMILY SSF54001 94 243 2.85E-31 T 28-03-2018 CJD35_RS18720 13f2616a753661902f92545b231bf7d9 259 Gene3D G3DSA:3.90.260.10 141 235 3.1E-7 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS18720 13f2616a753661902f92545b231bf7d9 259 Pfam PF01841 Transglutaminase-like superfamily 129 216 4.6E-20 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS18720 13f2616a753661902f92545b231bf7d9 259 SMART SM00460 158 218 2.6E-14 T 28-03-2018 IPR002931 Transglutaminase-like CJD35_RS00125 499ccd7e86f5aff9be072d94175999aa 189 PRINTS PR01217 Proline rich extensin signature 121 142 1.6E-9 T 28-03-2018 CJD35_RS00125 499ccd7e86f5aff9be072d94175999aa 189 PRINTS PR01217 Proline rich extensin signature 106 118 1.6E-9 T 28-03-2018 CJD35_RS00125 499ccd7e86f5aff9be072d94175999aa 189 PRINTS PR01217 Proline rich extensin signature 64 80 1.6E-9 T 28-03-2018 CJD35_RS00900 6b2d7a9fe63cd0618d0a7625a9bf261d 108 Pfam PF04241 Protein of unknown function (DUF423) 16 91 4.9E-16 T 28-03-2018 IPR006696 Protein of unknown function DUF423 CJD35_RS03215 096bfadc6ff59d2a68ea6c6c13878068 136 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 8 136 1.3E-41 T 28-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CJD35_RS03215 096bfadc6ff59d2a68ea6c6c13878068 136 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 71 133 9.0E-9 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CJD35_RS03215 096bfadc6ff59d2a68ea6c6c13878068 136 Pfam PF00460 Flagella basal body rod protein 10 39 6.3E-5 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CJD35_RS18715 65fe6a0e3ef8e22c46deff5e7e899615 501 SUPERFAMILY SSF56112 92 153 3.7E-20 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS18715 65fe6a0e3ef8e22c46deff5e7e899615 501 SUPERFAMILY SSF56112 200 306 3.7E-20 T 28-03-2018 IPR011009 Protein kinase-like domain CJD35_RS18715 65fe6a0e3ef8e22c46deff5e7e899615 501 Pfam PF03109 ABC1 family 108 226 5.4E-33 T 28-03-2018 IPR004147 UbiB domain CJD35_RS18715 65fe6a0e3ef8e22c46deff5e7e899615 501 Gene3D G3DSA:3.30.200.20 97 239 1.1E-24 T 28-03-2018 CJD35_RS05350 1add36428b1a337edb5b46f6acbe0fd4 426 Pfam PF02321 Outer membrane efflux protein 249 404 4.5E-12 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CJD35_RS05350 1add36428b1a337edb5b46f6acbe0fd4 426 SUPERFAMILY SSF56954 13 414 6.93E-48 T 28-03-2018 CJD35_RS05350 1add36428b1a337edb5b46f6acbe0fd4 426 Gene3D G3DSA:1.20.1600.10 31 417 1.2E-37 T 28-03-2018 CJD35_RS03690 5d5ca4cde3b237867e6cb5b0bd337a36 204 Pfam PF01810 LysE type translocator 16 200 3.1E-38 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CJD35_RS03690 5d5ca4cde3b237867e6cb5b0bd337a36 204 PIRSF PIRSF006324 1 204 2.3E-62 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CJD35_RS22170 cba6ca46791549e2e840f2deba49c85d 289 Pfam PF00483 Nucleotidyl transferase 2 237 2.6E-69 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CJD35_RS22170 cba6ca46791549e2e840f2deba49c85d 289 SUPERFAMILY SSF53448 1 286 3.25E-86 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS22170 cba6ca46791549e2e840f2deba49c85d 289 Gene3D G3DSA:3.90.550.10 1 289 5.7E-68 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS22170 cba6ca46791549e2e840f2deba49c85d 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 3.7E-147 T 28-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CJD35_RS17605 381e69b60acf7b326dbc406a2b4e9b4d 260 SUPERFAMILY SSF52833 1 97 5.3E-15 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS17605 381e69b60acf7b326dbc406a2b4e9b4d 260 Gene3D G3DSA:3.40.30.10 1 89 5.3E-15 T 28-03-2018 CJD35_RS17605 381e69b60acf7b326dbc406a2b4e9b4d 260 Gene3D G3DSA:1.20.1050.10 90 213 6.8E-15 T 28-03-2018 CJD35_RS17605 381e69b60acf7b326dbc406a2b4e9b4d 260 SUPERFAMILY SSF47616 74 209 7.86E-15 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS17605 381e69b60acf7b326dbc406a2b4e9b4d 260 Pfam PF13417 Glutathione S-transferase, N-terminal domain 2 79 4.1E-13 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS04055 9c5c59fb7d47604848ab774bfbf8dff3 64 SUPERFAMILY SSF57716 4 53 2.14E-12 T 28-03-2018 CJD35_RS04055 9c5c59fb7d47604848ab774bfbf8dff3 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 49 1.4E-12 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CJD35_RS04055 9c5c59fb7d47604848ab774bfbf8dff3 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 2 55 13.794 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CJD35_RS04055 9c5c59fb7d47604848ab774bfbf8dff3 64 Gene3D G3DSA:3.30.50.10 2 55 1.4E-16 T 28-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 CJD35_RS05845 63a312535aec777e732e002e14ea2886 232 Gene3D G3DSA:3.40.50.1820 5 232 1.3E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS05845 63a312535aec777e732e002e14ea2886 232 Pfam PF01738 Dienelactone hydrolase family 16 230 1.3E-44 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CJD35_RS05845 63a312535aec777e732e002e14ea2886 232 SUPERFAMILY SSF53474 13 231 4.47E-42 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS16215 3e207cb96429f9cef9e285fd1592f828 117 SUPERFAMILY SSF56349 6 73 5.47E-7 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CJD35_RS09045 ffba103d8ad1003a89fd4b5dab92eae7 293 Gene3D G3DSA:3.40.50.1000 70 237 3.0E-16 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS09045 ffba103d8ad1003a89fd4b5dab92eae7 293 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 90 275 4.1E-27 T 28-03-2018 IPR005519 Acid phosphatase, class B-like CJD35_RS09045 ffba103d8ad1003a89fd4b5dab92eae7 293 SUPERFAMILY SSF56784 92 275 9.76E-30 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS08530 1d60c6d6db43617056ba59598b0e57d0 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 28-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CJD35_RS08530 1d60c6d6db43617056ba59598b0e57d0 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.2E-66 T 28-03-2018 IPR023798 Ribosomal protein S7 domain CJD35_RS08530 1d60c6d6db43617056ba59598b0e57d0 156 Gene3D G3DSA:1.10.455.10 6 156 1.9E-61 T 28-03-2018 IPR023798 Ribosomal protein S7 domain CJD35_RS08530 1d60c6d6db43617056ba59598b0e57d0 156 SUPERFAMILY SSF47973 1 149 2.88E-61 T 28-03-2018 IPR023798 Ribosomal protein S7 domain CJD35_RS08530 1d60c6d6db43617056ba59598b0e57d0 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.425 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CJD35_RS08530 1d60c6d6db43617056ba59598b0e57d0 156 PIRSF PIRSF002122 3 156 8.7E-59 T 28-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CJD35_RS08530 1d60c6d6db43617056ba59598b0e57d0 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.2E-68 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CJD35_RS05355 63c52109513306cfdca0c41f75ec3cf3 415 Gene3D G3DSA:2.40.50.100 242 354 0.07 T 28-03-2018 CJD35_RS05355 63c52109513306cfdca0c41f75ec3cf3 415 Gene3D G3DSA:2.40.50.100 185 241 3.9E-10 T 28-03-2018 CJD35_RS05355 63c52109513306cfdca0c41f75ec3cf3 415 SUPERFAMILY SSF51230 190 256 1.01E-9 T 28-03-2018 IPR011053 Single hybrid motif CJD35_RS05355 63c52109513306cfdca0c41f75ec3cf3 415 Pfam PF13437 HlyD family secretion protein 228 327 9.4E-15 T 28-03-2018 CJD35_RS18895 4aae4e4b7b6be33fdf1e416dd656cb0c 181 Gene3D G3DSA:1.10.10.10 81 144 4.9E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS18895 4aae4e4b7b6be33fdf1e416dd656cb0c 181 Gene3D G3DSA:1.10.10.10 145 181 8.4E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS15500 fd77aa1c2904012fc5c5c0a86ab81392 335 Gene3D G3DSA:3.20.20.30 1 331 6.1E-45 T 28-03-2018 CJD35_RS15500 fd77aa1c2904012fc5c5c0a86ab81392 335 Pfam PF00296 Luciferase-like monooxygenase 5 309 8.0E-38 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS15500 fd77aa1c2904012fc5c5c0a86ab81392 335 SUPERFAMILY SSF51679 3 330 2.22E-44 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS05155 a126304c7b67f2e28be5913042362b57 138 Pfam PF11171 Protein of unknown function (DUF2958) 3 111 4.7E-44 T 28-03-2018 IPR021341 Protein of unknown function DUF2958 CJD35_RS19720 ef203cd7a8cd08071dc00a046d397708 193 Pfam PF05309 TraE protein 1 178 6.7E-54 T 28-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CJD35_RS11875 948112f2ecc5ae1dd66cfec87a73c073 239 Pfam PF02678 Pirin 19 125 7.6E-34 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CJD35_RS11875 948112f2ecc5ae1dd66cfec87a73c073 239 Gene3D G3DSA:2.60.120.10 18 137 1.6E-42 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS11875 948112f2ecc5ae1dd66cfec87a73c073 239 Gene3D G3DSA:2.60.120.10 138 238 2.9E-20 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CJD35_RS11875 948112f2ecc5ae1dd66cfec87a73c073 239 PIRSF PIRSF006232 6 237 4.6E-47 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CJD35_RS11875 948112f2ecc5ae1dd66cfec87a73c073 239 SUPERFAMILY SSF51182 9 237 9.18E-71 T 28-03-2018 IPR011051 RmlC-like cupin domain CJD35_RS13540 22be9621a6ad46ea7940fc1c1f871a88 253 SUPERFAMILY SSF52402 12 184 3.31E-16 T 28-03-2018 CJD35_RS13540 22be9621a6ad46ea7940fc1c1f871a88 253 Gene3D G3DSA:3.40.50.620 3 190 1.6E-19 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS17335 ec982c5d490bdd1493907e0d9d0c63a6 271 SUPERFAMILY SSF63829 43 256 7.19E-10 T 28-03-2018 CJD35_RS17335 ec982c5d490bdd1493907e0d9d0c63a6 271 Gene3D G3DSA:2.130.10.10 39 270 6.5E-11 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CJD35_RS14305 f614615c5c5f8e80191bc55e592f2a30 156 Pfam PF01967 MoaC family 15 148 2.2E-53 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CJD35_RS14305 f614615c5c5f8e80191bc55e592f2a30 156 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 156 36.681 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CJD35_RS14305 f614615c5c5f8e80191bc55e592f2a30 156 Gene3D G3DSA:3.30.70.640 2 156 1.7E-66 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CJD35_RS14305 f614615c5c5f8e80191bc55e592f2a30 156 SUPERFAMILY SSF55040 11 153 4.84E-58 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CJD35_RS14305 f614615c5c5f8e80191bc55e592f2a30 156 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 150 2.7E-62 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CJD35_RS18480 5be8ce4046f6224749cada5079b0c960 138 Pfam PF04120 Low affinity iron permease 5 125 5.0E-41 T 28-03-2018 IPR007251 Low affinity iron permease, Fet4 GO:0055085 CJD35_RS20705 5be8ce4046f6224749cada5079b0c960 138 Pfam PF04120 Low affinity iron permease 5 125 5.0E-41 T 28-03-2018 IPR007251 Low affinity iron permease, Fet4 GO:0055085 CJD35_RS00635 403813e86e0718062021c31910c9e299 140 Pfam PF01475 Ferric uptake regulator family 13 132 1.8E-41 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CJD35_RS00635 403813e86e0718062021c31910c9e299 140 SUPERFAMILY SSF46785 7 134 3.89E-38 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS00635 403813e86e0718062021c31910c9e299 140 Gene3D G3DSA:1.10.10.10 7 92 1.6E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS01940 6948d0480a312230bce1ce45cbe3837d 425 PIRSF PIRSF006060 2 421 2.7E-52 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CJD35_RS01940 6948d0480a312230bce1ce45cbe3837d 425 Pfam PF13520 Amino acid permease 13 400 4.2E-42 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CJD35_RS17960 c7411d2b494bc7dade15dc7658be7318 157 Pfam PF02308 MgtC family 20 147 1.8E-25 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CJD35_RS17960 c7411d2b494bc7dade15dc7658be7318 157 PRINTS PR01837 MgtC/SapB protein signature 74 96 2.5E-26 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CJD35_RS17960 c7411d2b494bc7dade15dc7658be7318 157 PRINTS PR01837 MgtC/SapB protein signature 42 60 2.5E-26 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CJD35_RS17960 c7411d2b494bc7dade15dc7658be7318 157 PRINTS PR01837 MgtC/SapB protein signature 101 125 2.5E-26 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CJD35_RS17960 c7411d2b494bc7dade15dc7658be7318 157 PRINTS PR01837 MgtC/SapB protein signature 23 42 2.5E-26 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CJD35_RS06600 6f88f25fc02f81d6af552a1084cca48c 191 Pfam PF10531 SLBB domain 118 162 2.8E-9 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CJD35_RS06600 6f88f25fc02f81d6af552a1084cca48c 191 Gene3D G3DSA:3.30.1950.10 45 107 1.1E-15 T 28-03-2018 CJD35_RS06600 6f88f25fc02f81d6af552a1084cca48c 191 Gene3D G3DSA:3.10.560.10 108 188 5.4E-17 T 28-03-2018 CJD35_RS06600 6f88f25fc02f81d6af552a1084cca48c 191 Pfam PF02563 Polysaccharide biosynthesis/export protein 37 112 4.4E-19 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CJD35_RS14695 a5a151839a3d5da9aba9bc61ad81f6d0 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 3 95 3.1E-30 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CJD35_RS14695 a5a151839a3d5da9aba9bc61ad81f6d0 95 SUPERFAMILY SSF141000 2 93 1.2E-31 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CJD35_RS14695 a5a151839a3d5da9aba9bc61ad81f6d0 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 24.061 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CJD35_RS14695 a5a151839a3d5da9aba9bc61ad81f6d0 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 90 5.0E-23 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 CJD35_RS03775 05162bc2e6997c117bb6ecee054e6c5b 222 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 7 203 1.0E-13 T 28-03-2018 CJD35_RS07195 9bd1ba82da52597519e89bcf56aad919 117 Pfam PF10387 Protein of unknown function (DUF2442) 28 97 5.0E-14 T 28-03-2018 IPR018841 Protein of unknown function DUF2442 CJD35_RS19545 13089c763032cb396611a3f1065d2344 289 Gene3D G3DSA:3.20.20.140 1 289 1.2E-46 T 28-03-2018 CJD35_RS19545 13089c763032cb396611a3f1065d2344 289 Pfam PF04909 Amidohydrolase 23 286 6.5E-46 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS19545 13089c763032cb396611a3f1065d2344 289 SUPERFAMILY SSF51556 19 286 1.79E-69 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS07515 c541f17ca7ae452dcbd4afbc6541df16 212 Gene3D G3DSA:3.40.50.300 41 195 5.0E-6 T 28-03-2018 CJD35_RS07515 c541f17ca7ae452dcbd4afbc6541df16 212 SUPERFAMILY SSF52540 38 173 8.26E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS00330 a560ca8bc72da797e77db561794a08a6 107 Pfam PF11836 Phage tail tube protein, GTA-gp10 13 106 3.2E-15 T 28-03-2018 IPR021791 Phage tail tube protein, GTA-gp10 CJD35_RS00980 6b2572f3d9b7b9b71435d6ce96e3d412 235 Pfam PF01988 VIT family 21 228 2.7E-54 T 28-03-2018 IPR008217 Ccc1 family CJD35_RS21810 021896e0e5fbfc7a47b42a115a7efc97 161 Pfam PF13730 Helix-turn-helix domain 45 98 1.2E-9 T 28-03-2018 CJD35_RS21810 021896e0e5fbfc7a47b42a115a7efc97 161 SUPERFAMILY SSF46785 72 133 2.44E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS21810 021896e0e5fbfc7a47b42a115a7efc97 161 Gene3D G3DSA:1.10.10.10 11 155 2.0E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS03560 ffe9bc9b5d1b1bbfa94a236c7ea2c32c 233 Pfam PF13930 DNA/RNA non-specific endonuclease 94 214 4.1E-21 T 28-03-2018 CJD35_RS19585 403ec73a006552e22428a07e1a6663e3 287 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 9 273 1.6E-84 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CJD35_RS19585 403ec73a006552e22428a07e1a6663e3 287 SUPERFAMILY SSF53213 2 281 4.32E-96 T 28-03-2018 CJD35_RS19585 403ec73a006552e22428a07e1a6663e3 287 Gene3D G3DSA:3.40.830.10 1 287 5.4E-58 T 28-03-2018 CJD35_RS00305 6b2bc9ba1d8c62f1555745513c12821d 118 SUPERFAMILY SSF54001 1 101 2.35E-8 T 28-03-2018 CJD35_RS00305 6b2bc9ba1d8c62f1555745513c12821d 118 Gene3D G3DSA:3.90.1720.10 1 117 1.2E-10 T 28-03-2018 CJD35_RS10540 a79f5c9330fd0977ad47fb1c42f0a70b 92 Pfam PF04800 ETC complex I subunit conserved region 3 92 7.1E-30 T 28-03-2018 IPR006885 NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial GO:0016651|GO:0022900 CJD35_RS10540 a79f5c9330fd0977ad47fb1c42f0a70b 92 Gene3D G3DSA:3.30.160.190 1 78 7.1E-29 T 28-03-2018 CJD35_RS07060 0e038018828d531e45db0c1abbb1c3ed 197 Gene3D G3DSA:3.40.109.10 1 197 1.5E-35 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CJD35_RS07060 0e038018828d531e45db0c1abbb1c3ed 197 SUPERFAMILY SSF55469 8 191 1.11E-44 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CJD35_RS07060 0e038018828d531e45db0c1abbb1c3ed 197 Pfam PF00881 Nitroreductase family 18 62 1.0E-12 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CJD35_RS07060 0e038018828d531e45db0c1abbb1c3ed 197 Pfam PF00881 Nitroreductase family 77 162 1.8E-6 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CJD35_RS14395 87c6358dde73ba8579583d2602cf496d 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 19.642 T 28-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CJD35_RS14395 87c6358dde73ba8579583d2602cf496d 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 3.1E-22 T 28-03-2018 CJD35_RS00800 76c873e81fbb0b7d6311562c917b9308 934 SUPERFAMILY SSF53335 161 326 1.32E-48 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS00800 76c873e81fbb0b7d6311562c917b9308 934 SUPERFAMILY SSF53335 354 599 1.32E-48 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS00800 76c873e81fbb0b7d6311562c917b9308 934 Pfam PF02384 N-6 DNA Methylase 358 501 9.4E-6 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CJD35_RS00800 76c873e81fbb0b7d6311562c917b9308 934 Gene3D G3DSA:3.40.50.150 305 625 2.4E-24 T 28-03-2018 CJD35_RS11030 665bfeeebe92bd3baed310b9373c3f7f 329 Pfam PF00482 Type II secretion system (T2SS), protein F 190 318 5.9E-19 T 28-03-2018 IPR018076 Type II secretion system F domain CJD35_RS20935 85b655d8a687e368ad3fef0da38c7e6c 196 Gene3D G3DSA:2.40.50.90 30 174 4.4E-13 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain CJD35_RS20935 85b655d8a687e368ad3fef0da38c7e6c 196 SUPERFAMILY SSF50199 48 176 1.57E-13 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS00230 93397dc895cb568475cbbab5ffad600b 227 Pfam PF06242 Protein of unknown function (DUF1013) 29 164 8.5E-60 T 28-03-2018 IPR010421 Protein of unknown function DUF1013 CJD35_RS02115 5daf3711e0952d5d2a2d6ae707ad2f01 107 PIRSF PIRSF031780 1 106 1.3E-35 T 28-03-2018 IPR009945 Protein of unknown function DUF1476 CJD35_RS02115 5daf3711e0952d5d2a2d6ae707ad2f01 107 Pfam PF07345 Domain of unknown function (DUF1476) 1 101 1.6E-42 T 28-03-2018 IPR009945 Protein of unknown function DUF1476 CJD35_RS01130 b20c159d4e49651696683ce6127f10ef 263 Gene3D G3DSA:1.10.10.10 82 140 1.1E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS01130 b20c159d4e49651696683ce6127f10ef 263 SUPERFAMILY SSF52172 139 254 6.12E-22 T 28-03-2018 IPR011006 CheY-like superfamily CJD35_RS01130 b20c159d4e49651696683ce6127f10ef 263 SMART SM00448 140 250 4.0E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS01130 b20c159d4e49651696683ce6127f10ef 263 PIRSF PIRSF036400 1 263 1.2E-107 T 28-03-2018 IPR014605 Signal transduction response regulator PhyR-like, alphaproteobacteria CJD35_RS01130 b20c159d4e49651696683ce6127f10ef 263 Pfam PF08281 Sigma-70, region 4 85 131 4.6E-6 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CJD35_RS01130 b20c159d4e49651696683ce6127f10ef 263 Pfam PF00072 Response regulator receiver domain 142 250 9.9E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CJD35_RS01130 b20c159d4e49651696683ce6127f10ef 263 Gene3D G3DSA:3.40.50.2300 141 260 2.7E-19 T 28-03-2018 CJD35_RS15865 bcfbd07a9da6daef0e71a16151ee24b6 340 Gene3D G3DSA:3.20.20.30 14 331 1.2E-50 T 28-03-2018 CJD35_RS15865 bcfbd07a9da6daef0e71a16151ee24b6 340 SUPERFAMILY SSF51679 14 325 4.06E-52 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS15865 bcfbd07a9da6daef0e71a16151ee24b6 340 Pfam PF00296 Luciferase-like monooxygenase 14 308 1.2E-52 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CJD35_RS15765 0a4b8e98f6d5834791e8d5327bbe22a8 525 Pfam PF01593 Flavin containing amine oxidoreductase 16 321 1.1E-12 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 CJD35_RS15765 0a4b8e98f6d5834791e8d5327bbe22a8 525 Gene3D G3DSA:3.50.50.60 1 525 7.3E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15765 0a4b8e98f6d5834791e8d5327bbe22a8 525 PRINTS PR00419 Adrenodoxin reductase family signature 6 28 4.0E-5 T 28-03-2018 CJD35_RS15765 0a4b8e98f6d5834791e8d5327bbe22a8 525 PRINTS PR00419 Adrenodoxin reductase family signature 29 42 4.0E-5 T 28-03-2018 CJD35_RS15765 0a4b8e98f6d5834791e8d5327bbe22a8 525 SUPERFAMILY SSF51905 477 521 3.71E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS15765 0a4b8e98f6d5834791e8d5327bbe22a8 525 SUPERFAMILY SSF51905 1 324 3.71E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CJD35_RS13775 5b57fe14badf88d983e0b393a79dd1dc 288 SMART SM00974 197 269 1.5E-7 T 28-03-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding CJD35_RS12365 ab5c17d27626d381cb079679421c5cb6 426 Gene3D G3DSA:1.25.40.10 115 407 3.9E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS06870 ec2fe0d78c1e7691dc31b5ef04b3df56 432 SUPERFAMILY SSF103473 12 420 1.83E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS06870 ec2fe0d78c1e7691dc31b5ef04b3df56 432 Gene3D G3DSA:1.20.1250.20 219 431 1.5E-17 T 28-03-2018 CJD35_RS06870 ec2fe0d78c1e7691dc31b5ef04b3df56 432 Gene3D G3DSA:1.20.1250.20 17 213 2.9E-35 T 28-03-2018 CJD35_RS06870 ec2fe0d78c1e7691dc31b5ef04b3df56 432 Pfam PF07690 Major Facilitator Superfamily 28 379 1.2E-40 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS05595 4ed338fe54f5672d3572672c4ea3a7a4 211 Gene3D G3DSA:2.50.20.10 27 205 1.7E-26 T 28-03-2018 CJD35_RS05595 4ed338fe54f5672d3572672c4ea3a7a4 211 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 41 199 4.3E-24 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CJD35_RS05595 4ed338fe54f5672d3572672c4ea3a7a4 211 SUPERFAMILY SSF89392 32 203 3.22E-32 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CJD35_RS05445 831879050226194d94d56b9c20917ff4 373 Gene3D G3DSA:1.25.40.10 74 359 6.4E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS05445 831879050226194d94d56b9c20917ff4 373 SUPERFAMILY SSF48452 201 307 9.21E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS11025 60b36c57e368c99373cc95f9fe58c273 138 Pfam PF09917 Uncharacterized protein conserved in bacteria (DUF2147) 27 135 2.4E-32 T 28-03-2018 IPR019223 Domain of unknown function DUF2147 CJD35_RS22115 ca6da278aea4758c2dc0f1d95f28f6e5 232 Gene3D G3DSA:3.30.1890.10 70 194 9.0E-4 T 28-03-2018 CJD35_RS22115 ca6da278aea4758c2dc0f1d95f28f6e5 232 Gene3D G3DSA:1.20.5.170 1 69 5.0E-4 T 28-03-2018 CJD35_RS20895 0205c8fa1c079417d3d41b0d428e717c 114 Pfam PF05101 Type IV secretory pathway, VirB3-like protein 9 92 1.8E-20 T 28-03-2018 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB CJD35_RS19715 fe6e82e0a45329c72efe07344ac39d70 96 Pfam PF07178 TraL protein 6 94 2.4E-31 T 28-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CJD35_RS19715 fe6e82e0a45329c72efe07344ac39d70 96 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 4 95 2.9E-31 T 28-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CJD35_RS12900 a1d7744de6671620c6f3f1813efafbcf 199 Pfam PF02660 Glycerol-3-phosphate acyltransferase 14 186 3.3E-48 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CJD35_RS12900 a1d7744de6671620c6f3f1813efafbcf 199 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 10 195 19.457 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CJD35_RS12900 a1d7744de6671620c6f3f1813efafbcf 199 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 7 195 3.6E-49 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CJD35_RS12900 a1d7744de6671620c6f3f1813efafbcf 199 SMART SM01207 13 187 1.4E-79 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CJD35_RS13710 1576ba909978e571a579a86a88cb59ea 434 Gene3D G3DSA:2.170.14.10 3 99 4.4E-11 T 28-03-2018 IPR009093 Bacteriophage P22 tailspike, N-terminal GO:0009405 CJD35_RS13710 1576ba909978e571a579a86a88cb59ea 434 SUPERFAMILY SSF51327 6 98 5.36E-10 T 28-03-2018 IPR009093 Bacteriophage P22 tailspike, N-terminal GO:0009405 CJD35_RS11625 92e02fdba309347912ede9007d52497b 119 Pfam PF05433 Glycine zipper 2TM domain 71 111 3.2E-8 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CJD35_RS09700 36a4f0c29d0ab7dea5631da46eff3a2e 273 Gene3D G3DSA:3.40.50.150 36 259 2.7E-19 T 28-03-2018 CJD35_RS09700 36a4f0c29d0ab7dea5631da46eff3a2e 273 SUPERFAMILY SSF53335 54 219 3.21E-13 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS09700 36a4f0c29d0ab7dea5631da46eff3a2e 273 PIRSF PIRSF031679 9 272 2.5E-95 T 28-03-2018 IPR016980 S-adenosyl-L-methionine dependent methyltransferase, Alr7345, predicted CJD35_RS16915 0306501866ac8f12b7a9d2c0181dae11 497 Gene3D G3DSA:1.20.1250.20 1 164 2.4E-10 T 28-03-2018 CJD35_RS16915 0306501866ac8f12b7a9d2c0181dae11 497 SUPERFAMILY SSF103473 214 386 3.53E-10 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS16915 0306501866ac8f12b7a9d2c0181dae11 497 SUPERFAMILY SSF103473 2 165 3.53E-10 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS16915 0306501866ac8f12b7a9d2c0181dae11 497 SUPERFAMILY SSF103473 446 470 3.53E-10 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS02800 2bd94a924065ecaa74fbeae8b78ffbda 218 Gene3D G3DSA:1.20.1080.10 113 213 0.011 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CJD35_RS02280 58b0c6e3d680425ac1687e316e47e2cc 441 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 195 437 5.6E-74 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CJD35_RS02280 58b0c6e3d680425ac1687e316e47e2cc 441 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 81 8.2E-23 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CJD35_RS02410 6af0c9f509779640982f3f4b101dd63e 305 Pfam PF13478 XdhC Rossmann domain 156 296 3.5E-34 T 28-03-2018 IPR027051 XdhC Rossmann domain CJD35_RS02410 6af0c9f509779640982f3f4b101dd63e 305 Pfam PF02625 XdhC and CoxI family 16 79 2.1E-23 T 28-03-2018 IPR003777 XdhC- CoxI CJD35_RS03855 14d6f46c4c2bca7ebfc5efb18641ef85 57 Pfam PF07896 Protein of unknown function (DUF1674) 8 57 1.4E-7 T 28-03-2018 IPR012875 Protein of unknown function DUF1674 CJD35_RS03550 a2042b2e1f0625f11070fb7181bbe1fd 171 Pfam PF12276 Protein of unknown function (DUF3617) 15 168 1.4E-22 T 28-03-2018 IPR022061 Protein of unknown function DUF3617 CJD35_RS13840 aec4f9bf64449a102848dda876b9872f 85 Pfam PF07362 Post-segregation antitoxin CcdA 15 85 8.8E-30 T 28-03-2018 IPR009956 Post-segregation antitoxin CcdA CJD35_RS09235 68c59c15686528e9c9ae966f06cc890a 89 SUPERFAMILY SSF89447 5 54 2.25E-8 T 28-03-2018 CJD35_RS09235 68c59c15686528e9c9ae966f06cc890a 89 Gene3D G3DSA:2.10.260.10 7 45 4.4E-11 T 28-03-2018 CJD35_RS05895 ee5205d24a7dc2b5526fa1c03b55058c 176 Pfam PF02620 Uncharacterized ACR, COG1399 65 173 7.5E-13 T 28-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CJD35_RS11745 269fac39ce1f5bd9f2ef36303dc048d4 511 Pfam PF09721 Transmembrane exosortase (Exosortase_EpsH) 32 279 3.5E-53 T 28-03-2018 IPR019127 Exosortase EpsH-related CJD35_RS11745 269fac39ce1f5bd9f2ef36303dc048d4 511 Pfam PF11984 Protein of unknown function (DUF3485) 312 498 8.5E-24 T 28-03-2018 IPR014263 Methanolan biosynthesis EpsI CJD35_RS11745 269fac39ce1f5bd9f2ef36303dc048d4 511 TIGRFAM TIGR02602 8TM_EpsH: exosortase 45 275 4.6E-54 T 28-03-2018 IPR013426 Exosortase, EpsH CJD35_RS11745 269fac39ce1f5bd9f2ef36303dc048d4 511 TIGRFAM TIGR04178 exo_archaeo: exosortase/archaeosortase family protein 187 279 9.4E-17 T 28-03-2018 IPR026392 Exosortase/Archaeosortase domain CJD35_RS11745 269fac39ce1f5bd9f2ef36303dc048d4 511 TIGRFAM TIGR02914 EpsI_fam: EpsI family protein 341 500 1.4E-26 T 28-03-2018 IPR014263 Methanolan biosynthesis EpsI CJD35_RS17810 6fce69b593e20d52eb01a324f721d774 176 Pfam PF07291 Methylamine utilisation protein MauE 10 174 2.9E-30 T 28-03-2018 IPR009908 Methylamine utilisation protein, MauE GO:0016021|GO:0030416 CJD35_RS11370 edd2544b93143143a974bc183ea017ad 511 Gene3D G3DSA:3.40.50.1110 250 495 8.2E-4 T 28-03-2018 CJD35_RS04125 6fa08339988669819c70f4ea2b2d01ca 413 SUPERFAMILY SSF53335 127 391 4.14E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS04125 6fa08339988669819c70f4ea2b2d01ca 413 Gene3D G3DSA:3.40.50.150 114 391 1.7E-60 T 28-03-2018 CJD35_RS04125 6fa08339988669819c70f4ea2b2d01ca 413 Pfam PF02353 Mycolic acid cyclopropane synthetase 118 382 2.0E-86 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS04125 6fa08339988669819c70f4ea2b2d01ca 413 PIRSF PIRSF003085 1 409 5.5E-128 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CJD35_RS04780 8e093d1b5eed3d4da77fb5092179224d 180 PIRSF PIRSF032038 3 180 6.5E-33 T 28-03-2018 IPR016987 Uncharacterised conserved protein UCP023238 CJD35_RS13930 51d39c63ca56a094fd589bde69cbdecd 280 Gene3D G3DSA:2.40.128.130 10 280 2.9E-31 T 28-03-2018 CJD35_RS13930 51d39c63ca56a094fd589bde69cbdecd 280 Pfam PF13505 Outer membrane protein beta-barrel domain 12 280 3.3E-15 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel CJD35_RS13930 51d39c63ca56a094fd589bde69cbdecd 280 SUPERFAMILY SSF56925 30 66 1.96E-20 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS13930 51d39c63ca56a094fd589bde69cbdecd 280 SUPERFAMILY SSF56925 94 280 1.96E-20 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS09270 e23a87a51a5c0c93722c76c8a7ddfcae 163 Pfam PF14352 Domain of unknown function (DUF4402) 40 162 1.2E-22 T 28-03-2018 IPR025514 Protein of unknown function DUF4402 CJD35_RS11315 2ba4cbea5dfb85f3cf88e88ff22c2aed 438 Pfam PF11902 Protein of unknown function (DUF3422) 19 425 4.1E-132 T 28-03-2018 IPR021830 Protein of unknown function DUF3422 CJD35_RS19790 fe95477d3163ea0b1f6c7807aee97567 271 TIGRFAM TIGR02740 TraF-like: TraF-like protein 22 268 5.6E-73 T 28-03-2018 IPR014111 Type IV conjugative transfer system protein TraF CJD35_RS19790 fe95477d3163ea0b1f6c7807aee97567 271 Gene3D G3DSA:3.40.30.10 146 270 1.0E-7 T 28-03-2018 CJD35_RS19790 fe95477d3163ea0b1f6c7807aee97567 271 Pfam PF13728 F plasmid transfer operon protein 49 260 5.9E-72 T 28-03-2018 CJD35_RS19790 fe95477d3163ea0b1f6c7807aee97567 271 SUPERFAMILY SSF52833 146 264 2.37E-8 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS09285 39beed5524676b872697a28d0e6a8d5a 359 Pfam PF01594 AI-2E family transporter 18 346 4.1E-51 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CJD35_RS07275 f4f4be2388d61d965300d6a19f7e1f8d 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 9.7E-20 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CJD35_RS17410 e7dec3fadd9295a29cbd97839431018e 289 TIGRFAM TIGR03212 uraD_N-term-dom: putative urate catabolism protein 2 289 2.9E-150 T 28-03-2018 IPR017625 PuuE allantoinase/chitin deacetylase 1 CJD35_RS17410 e7dec3fadd9295a29cbd97839431018e 289 Gene3D G3DSA:3.20.20.370 1 289 6.6E-54 T 28-03-2018 CJD35_RS17410 e7dec3fadd9295a29cbd97839431018e 289 SUPERFAMILY SSF88713 2 288 1.28E-79 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CJD35_RS17410 e7dec3fadd9295a29cbd97839431018e 289 Pfam PF01522 Polysaccharide deacetylase 71 163 1.5E-9 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CJD35_RS04685 7a8f1e51da50f38c4c79e02d125af0a0 126 Pfam PF04024 PspC domain 7 61 9.2E-13 T 28-03-2018 IPR007168 Phage shock protein, PspC, N-terminal CJD35_RS04685 7a8f1e51da50f38c4c79e02d125af0a0 126 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 6 125 5.1E-37 T 28-03-2018 IPR014320 Phage shock protein, PspC CJD35_RS12125 d61db5fe15c375b466f9337ca76a3f17 1076 Pfam PF11739 Dicarboxylate transport 807 916 9.3E-21 T 28-03-2018 IPR021730 Dicarboxylate transport CJD35_RS12125 d61db5fe15c375b466f9337ca76a3f17 1076 Pfam PF11739 Dicarboxylate transport 935 1040 7.7E-15 T 28-03-2018 IPR021730 Dicarboxylate transport CJD35_RS21935 567d3150ff910301cad56a1002ee2004 368 Pfam PF03432 Relaxase/Mobilisation nuclease domain 121 222 2.7E-12 T 28-03-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 CJD35_RS22010 8c0cf552180d7f8c1bf2b3758d26d185 185 Gene3D G3DSA:1.20.1260.10 8 145 1.3E-21 T 28-03-2018 IPR012347 Ferritin-related CJD35_RS22010 8c0cf552180d7f8c1bf2b3758d26d185 185 Pfam PF03713 Domain of unknown function (DUF305) 92 149 1.5E-11 T 28-03-2018 IPR005183 Domain of unknown function DUF305 CJD35_RS05495 4d831a8ef6e73ad67f924d0c67dcf6f8 351 Pfam PF03773 Predicted permease 57 347 3.9E-65 T 28-03-2018 IPR005524 Predicted permease DUF318 CJD35_RS15210 a1f2ac6287387f703a6a55027d15b6f9 196 SUPERFAMILY SSF53335 11 161 4.49E-21 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS15210 a1f2ac6287387f703a6a55027d15b6f9 196 Pfam PF05401 Nodulation protein S (NodS) 20 146 1.4E-21 T 28-03-2018 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 CJD35_RS15210 a1f2ac6287387f703a6a55027d15b6f9 196 Gene3D G3DSA:3.40.50.150 29 194 1.6E-22 T 28-03-2018 CJD35_RS18935 303b6f627b8954ee7d96b22f738914e3 96 Gene3D G3DSA:1.10.1220.10 2 44 0.002 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS15265 ea629e2e8f63249f64c6f57706459ebb 446 Pfam PF13785 Domain of unknown function (DUF4178) 62 190 9.4E-22 T 28-03-2018 IPR025235 Domain of unknown function DUF4178 CJD35_RS15265 ea629e2e8f63249f64c6f57706459ebb 446 Gene3D G3DSA:3.90.820.10 8 60 5.3E-5 T 28-03-2018 CJD35_RS13060 7f2407a3d21cf15856d5e2f50e886931 253 Gene3D G3DSA:3.40.50.1820 1 253 3.7E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS13060 7f2407a3d21cf15856d5e2f50e886931 253 SUPERFAMILY SSF53474 6 134 1.73E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS13060 7f2407a3d21cf15856d5e2f50e886931 253 SUPERFAMILY SSF53474 189 252 1.73E-36 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS13060 7f2407a3d21cf15856d5e2f50e886931 253 Pfam PF12697 Alpha/beta hydrolase family 30 233 3.9E-13 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CJD35_RS10755 8967c36f7cc0906b3238060dafec7f1d 104 Gene3D G3DSA:1.20.120.20 13 104 3.7E-7 T 28-03-2018 CJD35_RS04980 57664577ee454d086523a1f1fa8b1995 329 PIRSF PIRSF018266 4 328 1.9E-66 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CJD35_RS04980 57664577ee454d086523a1f1fa8b1995 329 Pfam PF04773 FecR protein 121 212 2.5E-20 T 28-03-2018 IPR006860 FecR protein CJD35_RS04980 57664577ee454d086523a1f1fa8b1995 329 Pfam PF16220 Domain of unknown function (DUF4880) 14 54 6.1E-10 T 28-03-2018 IPR032623 FecR, N-terminal CJD35_RS11895 e939283933afd24bebb1df65ab5ce1ea 208 Gene3D G3DSA:1.20.120.20 34 201 1.9E-7 T 28-03-2018 CJD35_RS04130 5383bbd4ececc4fbd21172522deb216f 248 Pfam PF00174 Oxidoreductase molybdopterin binding domain 87 222 2.7E-38 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CJD35_RS04130 5383bbd4ececc4fbd21172522deb216f 248 Gene3D G3DSA:3.90.420.10 26 247 5.1E-58 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CJD35_RS04130 5383bbd4ececc4fbd21172522deb216f 248 SUPERFAMILY SSF56524 32 247 3.14E-52 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CJD35_RS12345 380cad1f094b8a743bd3b5da9e62d424 297 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 275 5.2E-26 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CJD35_RS09610 96c67f592b5e88408cd8643b0a6188f5 240 Pfam PF07298 NnrU protein 16 231 5.2E-45 T 28-03-2018 IPR009915 NnrU domain CJD35_RS02760 ccec632bf3fc9a7884cc4685e094edb9 202 Gene3D G3DSA:3.40.50.360 1 202 2.9E-23 T 28-03-2018 IPR029039 Flavoprotein-like domain CJD35_RS02760 ccec632bf3fc9a7884cc4685e094edb9 202 Pfam PF03358 NADPH-dependent FMN reductase 4 158 5.7E-18 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CJD35_RS02760 ccec632bf3fc9a7884cc4685e094edb9 202 SUPERFAMILY SSF52218 1 170 1.47E-22 T 28-03-2018 IPR029039 Flavoprotein-like domain CJD35_RS11340 da13fa724ee9e4e13229e58eb90fab7e 346 Gene3D G3DSA:2.40.10.10 255 344 8.4E-10 T 28-03-2018 CJD35_RS11340 da13fa724ee9e4e13229e58eb90fab7e 346 Pfam PF13365 Trypsin-like peptidase domain 178 317 1.1E-15 T 28-03-2018 CJD35_RS11340 da13fa724ee9e4e13229e58eb90fab7e 346 Gene3D G3DSA:2.40.10.10 62 254 1.2E-4 T 28-03-2018 CJD35_RS11340 da13fa724ee9e4e13229e58eb90fab7e 346 SUPERFAMILY SSF50494 159 323 6.94E-19 T 28-03-2018 IPR009003 Peptidase S1, PA clan CJD35_RS15290 5d701966458f0536237c34161159ec06 110 SUPERFAMILY SSF53474 9 73 1.91E-8 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS15290 5d701966458f0536237c34161159ec06 110 Gene3D G3DSA:3.40.50.1820 4 83 2.7E-8 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS13405 3c3d1c367ed221523efd2b2738b399e7 210 SUPERFAMILY SSF48317 18 206 5.1E-35 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CJD35_RS13405 3c3d1c367ed221523efd2b2738b399e7 210 Pfam PF01569 PAP2 superfamily 97 208 1.1E-22 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CJD35_RS13405 3c3d1c367ed221523efd2b2738b399e7 210 Gene3D G3DSA:1.20.144.10 4 209 2.4E-25 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CJD35_RS13405 3c3d1c367ed221523efd2b2738b399e7 210 SMART SM00014 97 202 8.0E-19 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CJD35_RS04020 087685abccc4a12dc49b5fdf28bcb838 374 SUPERFAMILY SSF53383 25 373 9.04E-89 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CJD35_RS04020 087685abccc4a12dc49b5fdf28bcb838 374 Gene3D G3DSA:3.90.1150.10 273 374 1.8E-18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CJD35_RS04020 087685abccc4a12dc49b5fdf28bcb838 374 Gene3D G3DSA:3.40.640.10 36 272 3.3E-44 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CJD35_RS04020 087685abccc4a12dc49b5fdf28bcb838 374 Pfam PF00155 Aminotransferase class I and II 29 360 5.4E-47 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CJD35_RS05540 812ca0cd880a703d65dd8d76c0aba9c9 254 Pfam PF13391 HNH endonuclease 153 206 2.4E-8 T 28-03-2018 IPR003615 HNH nuclease CJD35_RS10930 a2d79095d2f48646482954cadeff5ada 209 Gene3D G3DSA:3.40.50.150 1 207 2.9E-17 T 28-03-2018 CJD35_RS10930 a2d79095d2f48646482954cadeff5ada 209 SUPERFAMILY SSF53335 36 185 1.76E-19 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS10930 a2d79095d2f48646482954cadeff5ada 209 Pfam PF13649 Methyltransferase domain 64 161 5.2E-7 T 28-03-2018 CJD35_RS17725 5d3fc01a5b05f5e820765546d4f3fb71 489 Pfam PF03055 Retinal pigment epithelial membrane protein 20 480 6.9E-96 T 28-03-2018 IPR004294 Carotenoid oxygenase GO:0016702|GO:0055114 CJD35_RS05205 5fed0a85d7feb6a609d65b1f282837a5 662 Pfam PF11843 Protein of unknown function (DUF3363) 279 657 6.2E-152 T 28-03-2018 IPR021795 Protein of unknown function DUF3363 CJD35_RS11825 a5066b592d120715772cde2d3579169b 200 Pfam PF14378 PAP2 superfamily 18 174 4.3E-20 T 28-03-2018 IPR026841 Inositolphosphotransferase Aur1/Ipt1 CJD35_RS11825 a5066b592d120715772cde2d3579169b 200 Gene3D G3DSA:1.20.144.10 17 192 5.3E-4 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CJD35_RS05885 c7615bdc180656509462fae8402affab 185 Pfam PF04355 SmpA / OmlA family 51 126 1.7E-18 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CJD35_RS00200 62f8f93800bc338cb14348f80d6f8cbd 441 Gene3D G3DSA:2.120.10.30 58 326 8.3E-36 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS00200 62f8f93800bc338cb14348f80d6f8cbd 441 Gene3D G3DSA:2.120.10.30 327 441 7.4E-14 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CJD35_RS00200 62f8f93800bc338cb14348f80d6f8cbd 441 Pfam PF07995 Glucose / Sorbosone dehydrogenase 199 353 7.0E-12 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase CJD35_RS00200 62f8f93800bc338cb14348f80d6f8cbd 441 SUPERFAMILY SSF50952 70 101 2.09E-33 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CJD35_RS00200 62f8f93800bc338cb14348f80d6f8cbd 441 SUPERFAMILY SSF50952 130 440 2.09E-33 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CJD35_RS00040 ddf52c69bcabe719167a218b5e2a88d2 428 Gene3D G3DSA:1.20.1250.20 3 205 4.5E-39 T 28-03-2018 CJD35_RS00040 ddf52c69bcabe719167a218b5e2a88d2 428 Gene3D G3DSA:1.20.1250.20 213 420 1.2E-23 T 28-03-2018 CJD35_RS00040 ddf52c69bcabe719167a218b5e2a88d2 428 SUPERFAMILY SSF103473 5 415 1.96E-73 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS00040 ddf52c69bcabe719167a218b5e2a88d2 428 Pfam PF07690 Major Facilitator Superfamily 20 374 1.3E-51 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CJD35_RS15860 cd8eb0d8efd675ecb1f20c783f9834c7 352 SUPERFAMILY SSF53335 8 340 4.46E-68 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS15860 cd8eb0d8efd675ecb1f20c783f9834c7 352 Gene3D G3DSA:3.40.50.150 19 290 9.4E-51 T 28-03-2018 CJD35_RS15860 cd8eb0d8efd675ecb1f20c783f9834c7 352 Pfam PF03492 SAM dependent carboxyl methyltransferase 49 344 6.7E-30 T 28-03-2018 IPR005299 SAM dependent carboxyl methyltransferase GO:0008168 CJD35_RS09680 5f11b273de9515db4eb2068bef77c232 222 Pfam PF06821 Serine hydrolase 15 186 1.1E-57 T 28-03-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 CJD35_RS09680 5f11b273de9515db4eb2068bef77c232 222 SUPERFAMILY SSF53474 13 178 5.18E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS09680 5f11b273de9515db4eb2068bef77c232 222 Gene3D G3DSA:3.40.50.1820 4 203 8.9E-16 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS14500 63ffd51dad14d3d1949742d395c58f78 206 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 21 192 1.2E-28 T 28-03-2018 IPR003740 Uncharacterised membrane protein YitT CJD35_RS03070 5591f505658ce6062dfed8094748b1e8 381 Pfam PF09594 Glycosyltransferase family 87 86 309 7.6E-27 T 28-03-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 CJD35_RS15275 46347bc6b8abd1c980f9857ded81da25 329 Pfam PF09851 Short C-terminal domain 300 325 4.3E-8 T 28-03-2018 IPR018649 SHOCT domain CJD35_RS15275 46347bc6b8abd1c980f9857ded81da25 329 SUPERFAMILY SSF117892 123 230 2.75E-7 T 28-03-2018 IPR001107 Band 7 domain CJD35_RS15275 46347bc6b8abd1c980f9857ded81da25 329 Pfam PF13421 SPFH domain-Band 7 family 26 234 3.4E-70 T 28-03-2018 IPR033880 SPFH domain, YdjI-like CJD35_RS13295 74f15a64f14e94f2d53c119978d9832f 157 Gene3D G3DSA:2.60.40.740 28 157 2.1E-5 T 28-03-2018 CJD35_RS20155 a84b3f00d64862a402dbcbeaf7d7cb9b 759 Gene3D G3DSA:1.20.210.10 269 742 9.3E-65 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS20155 a84b3f00d64862a402dbcbeaf7d7cb9b 759 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 281 724 9.6E-68 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS20155 a84b3f00d64862a402dbcbeaf7d7cb9b 759 SUPERFAMILY SSF81442 275 742 1.01E-72 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS07780 bc1b2e8713bd8afd40e6df4e369edde0 199 Pfam PF09335 SNARE associated Golgi protein 30 159 1.5E-18 T 28-03-2018 IPR032816 SNARE associated Golgi protein CJD35_RS20875 0158a2e0218e5ab15deb733003bd1a0f 338 Pfam PF04610 TrbL/VirB6 plasmid conjugal transfer protein 40 271 5.5E-36 T 28-03-2018 IPR007688 Plasmid conjugal transfer TrbL/VirB6 GO:0030255 CJD35_RS00755 38de019d062c042fbe8ea18d4832e9f3 444 SUPERFAMILY SSF103473 33 439 6.41E-34 T 28-03-2018 IPR020846 Major facilitator superfamily domain CJD35_RS00755 38de019d062c042fbe8ea18d4832e9f3 444 Pfam PF00083 Sugar (and other) transporter 38 226 8.6E-11 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CJD35_RS00755 38de019d062c042fbe8ea18d4832e9f3 444 ProSitePatterns PS00216 Sugar transport proteins signature 1. 314 331 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CJD35_RS00755 38de019d062c042fbe8ea18d4832e9f3 444 Gene3D G3DSA:1.20.1250.20 255 443 4.2E-8 T 28-03-2018 CJD35_RS00755 38de019d062c042fbe8ea18d4832e9f3 444 Gene3D G3DSA:1.20.1250.20 34 245 3.1E-11 T 28-03-2018 CJD35_RS16305 6ca3f474307fcdc7d773fe3286f43d9e 165 Pfam PF13577 SnoaL-like domain 6 134 1.6E-17 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS16305 6ca3f474307fcdc7d773fe3286f43d9e 165 SUPERFAMILY SSF54427 5 144 6.54E-28 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS16305 6ca3f474307fcdc7d773fe3286f43d9e 165 Gene3D G3DSA:3.10.450.50 4 146 1.7E-28 T 28-03-2018 CJD35_RS21860 613c01a4a4274bd73e1210eeb2eed157 228 Pfam PF01464 Transglycosylase SLT domain 12 146 1.9E-17 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CJD35_RS21860 613c01a4a4274bd73e1210eeb2eed157 228 Gene3D G3DSA:1.10.530.10 5 190 6.9E-16 T 28-03-2018 CJD35_RS21860 613c01a4a4274bd73e1210eeb2eed157 228 SUPERFAMILY SSF53955 71 151 8.44E-14 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS21860 613c01a4a4274bd73e1210eeb2eed157 228 SUPERFAMILY SSF53955 18 43 8.44E-14 T 28-03-2018 IPR023346 Lysozyme-like domain CJD35_RS03405 194f392dcd6b5766fd59a352d06f728d 183 SUPERFAMILY SSF56925 32 145 1.33E-7 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS03405 194f392dcd6b5766fd59a352d06f728d 183 Gene3D G3DSA:2.40.160.20 7 182 5.3E-7 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS01010 7b2417f67c847fad6fe754d69cc25027 117 PIRSF PIRSF016789 2 117 8.8E-35 T 28-03-2018 IPR007401 Protein of unknown function DUF454 CJD35_RS01010 7b2417f67c847fad6fe754d69cc25027 117 Pfam PF04304 Protein of unknown function (DUF454) 3 115 1.8E-37 T 28-03-2018 IPR007401 Protein of unknown function DUF454 CJD35_RS04805 07f7126d6f9996be62d173084a978be8 179 Gene3D G3DSA:1.10.150.20 95 166 4.0E-9 T 28-03-2018 CJD35_RS11925 2c589e803111c77d291041eec782c687 256 Gene3D G3DSA:3.60.21.10 19 256 7.3E-40 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS11925 2c589e803111c77d291041eec782c687 256 SUPERFAMILY SSF56300 24 242 9.12E-45 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CJD35_RS11925 2c589e803111c77d291041eec782c687 256 Pfam PF00149 Calcineurin-like phosphoesterase 26 217 1.2E-12 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CJD35_RS19060 4ca4c04d1183c67cccff842825ce3b4c 321 Gene3D G3DSA:3.40.50.620 8 275 1.2E-13 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS19060 4ca4c04d1183c67cccff842825ce3b4c 321 SUPERFAMILY SSF52402 19 214 1.21E-11 T 28-03-2018 CJD35_RS22125 71c73762776f4ca8193aabfa29924e49 108 SUPERFAMILY SSF53756 19 100 7.85E-10 T 28-03-2018 CJD35_RS22125 71c73762776f4ca8193aabfa29924e49 108 Gene3D G3DSA:3.40.50.2000 4 105 7.0E-11 T 28-03-2018 CJD35_RS08435 f8df1d2da46a5c770f88d4b2ff623d02 158 Gene3D G3DSA:2.30.30.220 6 122 3.2E-51 T 28-03-2018 IPR007481 Stringent starvation protein B CJD35_RS08435 f8df1d2da46a5c770f88d4b2ff623d02 158 SUPERFAMILY SSF101738 8 122 5.62E-43 T 28-03-2018 IPR007481 Stringent starvation protein B CJD35_RS08435 f8df1d2da46a5c770f88d4b2ff623d02 158 Pfam PF04386 Stringent starvation protein B 15 138 4.6E-46 T 28-03-2018 IPR007481 Stringent starvation protein B CJD35_RS11845 909e8484f58445dd75f3b2f1ea551b9e 282 TIGRFAM TIGR03381 agmatine_aguB: N-carbamoylputrescine amidase 4 278 6.7E-135 T 28-03-2018 IPR017755 N-carbamoylputrescine amidase GO:0006596|GO:0050126 KEGG: 00330+3.5.1.53|MetaCyc: PWY-43 CJD35_RS11845 909e8484f58445dd75f3b2f1ea551b9e 282 Pfam PF00795 Carbon-nitrogen hydrolase 5 259 4.7E-49 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS11845 909e8484f58445dd75f3b2f1ea551b9e 282 SUPERFAMILY SSF56317 1 278 8.63E-84 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS11845 909e8484f58445dd75f3b2f1ea551b9e 282 Gene3D G3DSA:3.60.110.10 3 277 5.2E-79 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CJD35_RS05735 8bd53e95597390dc72aeeca552b61bf8 238 Pfam PF01863 Protein of unknown function DUF45 33 228 1.1E-36 T 28-03-2018 IPR002725 Protein of unknown function DUF45 CJD35_RS14825 05a6cba365fb9307da551fce93db5eb1 129 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 32 125 4.1E-7 T 28-03-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CJD35_RS20615 9402e3e816c9213e197bf2c0830c657d 150 Pfam PF03466 LysR substrate binding domain 64 125 1.3E-9 T 28-03-2018 IPR005119 LysR, substrate-binding CJD35_RS20615 9402e3e816c9213e197bf2c0830c657d 150 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 38 9.6E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CJD35_RS20615 9402e3e816c9213e197bf2c0830c657d 150 Gene3D G3DSA:1.10.10.10 1 62 5.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS20615 9402e3e816c9213e197bf2c0830c657d 150 Gene3D G3DSA:3.40.190.10 63 144 3.1E-11 T 28-03-2018 CJD35_RS20615 9402e3e816c9213e197bf2c0830c657d 150 SUPERFAMILY SSF53850 65 124 1.9E-8 T 28-03-2018 CJD35_RS20615 9402e3e816c9213e197bf2c0830c657d 150 SUPERFAMILY SSF46785 2 61 5.99E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS02480 525c2f2ef48879256f9fc6f6fcc7811a 140 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 132 3.7E-20 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CJD35_RS19255 668e45b81d924954604e72fbebf2ce79 193 SUPERFAMILY SSF53335 5 159 9.91E-24 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS19255 668e45b81d924954604e72fbebf2ce79 193 Pfam PF05401 Nodulation protein S (NodS) 19 123 3.9E-20 T 28-03-2018 IPR008715 SAM-dependent methyltransferase, NodS-related GO:0008757|GO:0009312|GO:0009877 CJD35_RS19255 668e45b81d924954604e72fbebf2ce79 193 Gene3D G3DSA:3.40.50.150 27 192 1.7E-22 T 28-03-2018 CJD35_RS06305 dd70430245c2332e7c9104c811a0a502 271 Gene3D G3DSA:3.90.226.10 19 271 6.7E-54 T 28-03-2018 CJD35_RS06305 dd70430245c2332e7c9104c811a0a502 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 23 270 3.7E-42 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CJD35_RS06305 dd70430245c2332e7c9104c811a0a502 271 SUPERFAMILY SSF52096 18 269 2.49E-61 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS01505 3fc7ea09347634b8578f826fb9d54479 258 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 213 239 - T 28-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CJD35_RS01505 3fc7ea09347634b8578f826fb9d54479 258 Pfam PF01148 Cytidylyltransferase family 7 252 2.0E-54 T 28-03-2018 CJD35_RS06245 b8fd86e98e80934a8ed763ec6779cebf 827 Gene3D G3DSA:2.40.170.20 164 827 2.0E-66 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS06245 b8fd86e98e80934a8ed763ec6779cebf 827 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 154 2.8E-9 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS06245 b8fd86e98e80934a8ed763ec6779cebf 827 Gene3D G3DSA:2.170.130.10 24 163 9.9E-19 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CJD35_RS06245 b8fd86e98e80934a8ed763ec6779cebf 827 Pfam PF00593 TonB dependent receptor 321 826 2.7E-37 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS06245 b8fd86e98e80934a8ed763ec6779cebf 827 SUPERFAMILY SSF56935 20 272 3.59E-104 T 28-03-2018 CJD35_RS06245 b8fd86e98e80934a8ed763ec6779cebf 827 SUPERFAMILY SSF56935 545 827 3.59E-104 T 28-03-2018 CJD35_RS06245 b8fd86e98e80934a8ed763ec6779cebf 827 SUPERFAMILY SSF56935 336 500 3.59E-104 T 28-03-2018 CJD35_RS01955 78a19cf8eda8fe6836e8610a1bd22532 162 SUPERFAMILY SSF110087 5 141 2.48E-32 T 28-03-2018 IPR007410 Copper chaperone PCuAC CJD35_RS01955 78a19cf8eda8fe6836e8610a1bd22532 162 Pfam PF04314 Copper chaperone PCu(A)C 27 131 1.9E-22 T 28-03-2018 IPR007410 Copper chaperone PCuAC CJD35_RS14665 e87d9e5b7dec52e479eca57bcadc3374 313 PIRSF PIRSF018266 1 307 2.1E-45 T 28-03-2018 IPR012373 Fe(2+)-dicitrate sensor, transmembrane component CJD35_RS14665 e87d9e5b7dec52e479eca57bcadc3374 313 Pfam PF04773 FecR protein 106 196 5.0E-16 T 28-03-2018 IPR006860 FecR protein CJD35_RS10380 4d9b2a8e75c33dbd52a3382e074c981f 334 Pfam PF07486 Cell Wall Hydrolase 132 242 1.4E-25 T 28-03-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 CJD35_RS18565 dd59c095397cbd9c52d08c4748a85c44 188 Pfam PF05309 TraE protein 1 178 4.3E-55 T 28-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CJD35_RS00250 4b00b0f837bb8839a4086937e11b7dbb 65 Pfam PF06698 Protein of unknown function (DUF1192) 4 64 2.8E-20 T 28-03-2018 IPR009579 Protein of unknown function DUF1192 CJD35_RS22270 9c571379c0c34b4310c3da47d4eb772c 115 Gene3D G3DSA:1.10.1220.10 67 112 4.4E-4 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS04790 549e05c006201fb2bb20d9b72c342c5c 70 Pfam PF09866 Uncharacterized protein conserved in bacteria (DUF2093) 21 61 1.6E-22 T 28-03-2018 IPR018661 Protein of unknown function DUF2093 CJD35_RS06695 7f496f1598bf569488ce6a2e1ed85886 138 Pfam PF08818 Domain of unknown function (DU1801) 27 128 2.9E-12 T 28-03-2018 IPR014922 Domain of unknown function DUF1801 CJD35_RS06655 40d384b75bd11aa64504cbab0514a247 261 Pfam PF01925 Sulfite exporter TauE/SafE 8 258 3.1E-44 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CJD35_RS09595 d410126ab7f73b65522a6671e4033d8f 210 SUPERFAMILY SSF53335 6 167 4.22E-24 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS09595 d410126ab7f73b65522a6671e4033d8f 210 Gene3D G3DSA:3.40.50.150 3 183 5.3E-17 T 28-03-2018 CJD35_RS09595 d410126ab7f73b65522a6671e4033d8f 210 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 15 170 4.3E-19 T 28-03-2018 CJD35_RS11525 2b0ee7bb55a36f57e5e01b258210bd4d 167 Gene3D G3DSA:1.10.10.10 1 53 6.7E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS04900 859e4864dd242d0d26270d1c5632d4a6 191 SUPERFAMILY SSF52096 11 190 2.49E-13 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS04900 859e4864dd242d0d26270d1c5632d4a6 191 Gene3D G3DSA:3.90.226.10 10 191 1.3E-4 T 28-03-2018 CJD35_RS16980 c5615efb5cdf36c322b1dd2bb946b484 154 PIRSF PIRSF028288 1 154 3.4E-46 T 28-03-2018 IPR016878 Uncharacterised conserved protein UCP028288 CJD35_RS16980 c5615efb5cdf36c322b1dd2bb946b484 154 Gene3D G3DSA:3.10.450.50 2 154 3.1E-7 T 28-03-2018 CJD35_RS21845 f130bf038e101ce6c11c9da5da8839a9 185 SUPERFAMILY SSF50199 35 159 1.16E-13 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CJD35_RS21845 f130bf038e101ce6c11c9da5da8839a9 185 Gene3D G3DSA:2.40.50.90 33 171 6.3E-12 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain CJD35_RS13240 380a1af940c306d983be45c534dca94f 301 SUPERFAMILY SSF51569 6 294 9.11E-92 T 28-03-2018 CJD35_RS13240 380a1af940c306d983be45c534dca94f 301 Pfam PF00274 Fructose-bisphosphate aldolase class-I 2 213 6.4E-11 T 28-03-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CJD35_RS13240 380a1af940c306d983be45c534dca94f 301 Gene3D G3DSA:3.20.20.70 1 294 1.9E-65 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS21135 fc446e8fe9b5f585ca2b46e464782563 195 Pfam PF01526 Tn3 transposase DDE domain 2 188 1.3E-66 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS14790 daf864da09acd2f4048487db1b58dee1 206 Pfam PF07811 TadE-like protein 23 63 5.3E-8 T 28-03-2018 IPR012495 TadE-like CJD35_RS12140 c8a9c795630fd0c6371a2a2d4bc1fd29 107 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 51 98 2.5E-15 T 28-03-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter CJD35_RS12140 c8a9c795630fd0c6371a2a2d4bc1fd29 107 PIRSF PIRSF032126 3 104 1.3E-21 T 28-03-2018 IPR016989 ATP synthase protein I, alphaproteobacterial CJD35_RS05450 b440b1c78e94f475e560685b435fd59a 434 SUPERFAMILY SSF55166 266 420 1.18E-9 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CJD35_RS05450 b440b1c78e94f475e560685b435fd59a 434 Gene3D G3DSA:3.30.1380.10 266 421 1.9E-12 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CJD35_RS18630 8e0a53390ab6ffb79cb1c70d4da79da5 620 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 301 570 2.5E-89 T 28-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CJD35_RS18670 d1e8ef1906cceb43c9545145fac73a7e 207 Pfam PF03729 Short repeat of unknown function (DUF308) 155 195 0.0093 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane CJD35_RS18670 d1e8ef1906cceb43c9545145fac73a7e 207 Pfam PF03729 Short repeat of unknown function (DUF308) 80 155 2.3E-5 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane CJD35_RS18670 d1e8ef1906cceb43c9545145fac73a7e 207 Pfam PF03729 Short repeat of unknown function (DUF308) 22 93 3.4E-9 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane CJD35_RS00295 eedc48e9161fec7956ea844319edca32 165 Pfam PF10983 Protein of unknown function (DUF2793) 23 109 2.4E-31 T 28-03-2018 IPR021251 Protein of unknown function DUF2793 CJD35_RS11175 b13eaaa1217c7c6ac39db075f11636b5 167 Gene3D G3DSA:3.90.1140.10 7 167 1.3E-14 T 28-03-2018 CJD35_RS11175 b13eaaa1217c7c6ac39db075f11636b5 167 Pfam PF13563 2'-5' RNA ligase superfamily 20 154 7.7E-13 T 28-03-2018 CJD35_RS05105 b7cac9d86ffec21b5988a46ba3db2a55 444 Pfam PF10117 McrBC 5-methylcytosine restriction system component 56 387 7.0E-70 T 28-03-2018 IPR019292 5-methylcytosine restriction system component CJD35_RS04970 ae2008a049b6d237118af732a8aff44b 380 Gene3D G3DSA:1.10.10.60 4 301 5.7E-4 T 28-03-2018 CJD35_RS10950 acdf7fa70cd7af9408539c00b4562f3a 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 425 8.7E-56 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CJD35_RS10950 acdf7fa70cd7af9408539c00b4562f3a 452 Pfam PF01554 MatE 18 178 2.4E-21 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CJD35_RS10950 acdf7fa70cd7af9408539c00b4562f3a 452 Pfam PF01554 MatE 246 410 2.7E-26 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CJD35_RS17540 dfb09f7266519a9baa543dc89ce81649 114 Pfam PF01042 Endoribonuclease L-PSP 7 112 3.8E-24 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CJD35_RS17540 dfb09f7266519a9baa543dc89ce81649 114 SUPERFAMILY SSF55298 3 113 1.37E-30 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJD35_RS17540 dfb09f7266519a9baa543dc89ce81649 114 Gene3D G3DSA:3.30.1330.40 2 114 5.0E-26 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CJD35_RS13805 4d23a571b415996f61a69b9717b149fc 172 Gene3D G3DSA:3.40.630.30 3 124 7.6E-13 T 28-03-2018 CJD35_RS13805 4d23a571b415996f61a69b9717b149fc 172 SUPERFAMILY SSF55729 3 126 1.77E-18 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CJD35_RS13805 4d23a571b415996f61a69b9717b149fc 172 Pfam PF13527 Acetyltransferase (GNAT) domain 7 126 3.1E-8 T 28-03-2018 CJD35_RS01770 6e29208f66d1e95c7c2ab0be32e3dc77 321 Hamap MF_02040 Iron-sulfur cluster carrier protein. 67 314 32.636 T 28-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein CJD35_RS01770 6e29208f66d1e95c7c2ab0be32e3dc77 321 Gene3D G3DSA:3.40.50.300 61 293 2.2E-56 T 28-03-2018 CJD35_RS01770 6e29208f66d1e95c7c2ab0be32e3dc77 321 SUPERFAMILY SSF52540 75 318 8.17E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS01770 6e29208f66d1e95c7c2ab0be32e3dc77 321 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 75 313 5.3E-86 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CJD35_RS08705 ad59aebfbba17469b60ec8154330bab7 200 Pfam PF13289 SIR2-like domain 25 161 4.2E-19 T 28-03-2018 CJD35_RS16060 a36d44bcc991ebde71b27ded2344a57f 87 Pfam PF09386 Antitoxin ParD 1 78 2.4E-25 T 28-03-2018 IPR022789 Antitoxin ParD CJD35_RS16060 a36d44bcc991ebde71b27ded2344a57f 87 Gene3D G3DSA:1.10.1220.10 1 35 1.3E-5 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS22295 01e0fd1eda444d2d246bf2ff418a2096 201 Gene3D G3DSA:4.10.1090.10 25 140 6.4E-4 T 28-03-2018 CJD35_RS10395 fc9d14d1b5603f0161cd61a74479eb2b 399 Gene3D G3DSA:3.40.50.880 144 340 2.2E-6 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS11300 c7bfca049960baf69ab72687990f4d7b 150 Gene3D G3DSA:3.10.129.10 1 149 1.3E-35 T 28-03-2018 CJD35_RS11300 c7bfca049960baf69ab72687990f4d7b 150 Pfam PF01575 MaoC like domain 10 118 1.0E-22 T 28-03-2018 IPR002539 MaoC-like domain CJD35_RS11300 c7bfca049960baf69ab72687990f4d7b 150 SUPERFAMILY SSF54637 1 147 1.34E-42 T 28-03-2018 IPR029069 HotDog domain CJD35_RS11590 50fdc1cf31fae22ea67085ed2850d500 225 Pfam PF13641 Glycosyltransferase like family 2 67 221 4.2E-16 T 28-03-2018 CJD35_RS11590 50fdc1cf31fae22ea67085ed2850d500 225 SUPERFAMILY SSF53448 70 208 1.41E-8 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS11590 50fdc1cf31fae22ea67085ed2850d500 225 Gene3D G3DSA:3.90.550.10 37 225 6.0E-12 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CJD35_RS04115 308de0eac07364b1826c9dab18812f1b 91 Pfam PF11730 Protein of unknown function (DUF3297) 6 76 5.5E-39 T 28-03-2018 IPR021724 Protein of unknown function DUF3297 CJD35_RS08215 92cf7bcd8cca08e1b3d6a19fff77c96d 64 Pfam PF13770 Domain of unknown function (DUF4169) 3 54 1.0E-19 T 28-03-2018 IPR025227 Protein of unknown function DUF4169 CJD35_RS04435 4a6b0e0ea3dce847ca4f0d31cad66ebd 253 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 34 238 3.0E-51 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CJD35_RS04435 4a6b0e0ea3dce847ca4f0d31cad66ebd 253 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 249 1.7E-68 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CJD35_RS04435 4a6b0e0ea3dce847ca4f0d31cad66ebd 253 Gene3D G3DSA:3.60.140.10 3 253 1.7E-77 T 28-03-2018 CJD35_RS04435 4a6b0e0ea3dce847ca4f0d31cad66ebd 253 SUPERFAMILY SSF64438 6 251 1.68E-76 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CJD35_RS07845 92f12b35b3d72d043f7e83729a797765 612 Pfam PF05960 Bacterial protein of unknown function (DUF885) 53 602 2.5E-140 T 28-03-2018 IPR010281 Protein of unknown function DUF885 CJD35_RS11075 1934d34a1b387590497816c1294095ba 58 Pfam PF07411 Domain of unknown function (DUF1508) 11 56 4.7E-15 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CJD35_RS11075 1934d34a1b387590497816c1294095ba 58 SUPERFAMILY SSF160113 1 56 2.49E-12 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CJD35_RS11075 1934d34a1b387590497816c1294095ba 58 Gene3D G3DSA:3.30.160.160 5 46 7.2E-8 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CJD35_RS20200 ffb203bde0271a06f66ecd2ab41fce89 182 Gene3D G3DSA:1.20.120.330 33 169 1.6E-8 T 28-03-2018 CJD35_RS04555 448454af3543e6679e22c7db0e3dda91 344 Gene3D G3DSA:3.20.20.100 1 325 2.3E-100 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS04555 448454af3543e6679e22c7db0e3dda91 344 Pfam PF00248 Aldo/keto reductase family 15 319 3.2E-80 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS04555 448454af3543e6679e22c7db0e3dda91 344 SUPERFAMILY SSF51430 1 320 3.54E-106 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CJD35_RS09170 9220f5dadcf8266e05b5310b584e0d7b 111 Gene3D G3DSA:3.40.30.10 16 106 2.6E-7 T 28-03-2018 CJD35_RS02155 85f286e5d35ac5d34cbc0565fdc324ed 312 Gene3D G3DSA:2.160.20.10 157 294 3.3E-8 T 28-03-2018 IPR012334 Pectin lyase fold CJD35_RS02155 85f286e5d35ac5d34cbc0565fdc324ed 312 Gene3D G3DSA:2.160.20.10 22 156 7.9E-16 T 28-03-2018 IPR012334 Pectin lyase fold CJD35_RS02155 85f286e5d35ac5d34cbc0565fdc324ed 312 Pfam PF13229 Right handed beta helix region 95 267 1.1E-7 T 28-03-2018 CJD35_RS02155 85f286e5d35ac5d34cbc0565fdc324ed 312 SUPERFAMILY SSF51126 35 282 4.58E-34 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CJD35_RS02155 85f286e5d35ac5d34cbc0565fdc324ed 312 SMART SM00710 103 124 8700.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS02155 85f286e5d35ac5d34cbc0565fdc324ed 312 SMART SM00710 149 179 1400.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS02155 85f286e5d35ac5d34cbc0565fdc324ed 312 SMART SM00710 203 238 730.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS02155 85f286e5d35ac5d34cbc0565fdc324ed 312 SMART SM00710 125 146 160.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CJD35_RS00090 15cddee230d5ba92c8c1503f98fe5cfb 1392 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1052 1385 5.3E-52 T 28-03-2018 IPR007452 Translocation and assembly module TamB CJD35_RS05265 09a63d4579b349ec3fbe64dcc4f653fc 672 SUPERFAMILY SSF52540 105 557 3.45E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS05265 09a63d4579b349ec3fbe64dcc4f653fc 672 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 110 559 6.2E-103 T 28-03-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 CJD35_RS05265 09a63d4579b349ec3fbe64dcc4f653fc 672 Gene3D G3DSA:3.40.50.300 95 559 4.4E-49 T 28-03-2018 CJD35_RS08320 a23243af80885cd96687462597c0d325 248 Pfam PF05096 Glutamine cyclotransferase 19 246 3.2E-94 T 28-03-2018 IPR007788 Glutaminyl-peptide cyclotransferase GO:0016603|GO:0017186 CJD35_RS08320 a23243af80885cd96687462597c0d325 248 SUPERFAMILY SSF50969 24 241 4.0E-13 T 28-03-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CJD35_RS08320 a23243af80885cd96687462597c0d325 248 Gene3D G3DSA:2.140.10.10 13 241 2.7E-9 T 28-03-2018 CJD35_RS07140 119bfaaa6f42b57fea10508032d51bab 59 Gene3D G3DSA:1.10.10.60 8 56 5.0E-4 T 28-03-2018 CJD35_RS05270 15b38b5ceed916026637c04ceda21bb6 134 Gene3D G3DSA:1.10.1220.10 2 54 1.9E-6 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS07130 e961a0fb2943e8e3dd0a85dd9d71304d 288 Pfam PF07859 alpha/beta hydrolase fold 59 255 1.7E-20 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CJD35_RS07130 e961a0fb2943e8e3dd0a85dd9d71304d 288 SUPERFAMILY SSF53474 22 264 1.2E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS07130 e961a0fb2943e8e3dd0a85dd9d71304d 288 Gene3D G3DSA:3.40.50.1820 20 288 1.3E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CJD35_RS08660 b9527150ed17fb0234e69ed53a7b9561 177 SUPERFAMILY SSF55961 34 176 1.22E-13 T 28-03-2018 CJD35_RS08660 b9527150ed17fb0234e69ed53a7b9561 177 Gene3D G3DSA:3.30.530.20 9 177 3.0E-17 T 28-03-2018 IPR023393 START-like domain CJD35_RS09640 8602b321f7c0ab0d856e5983091e7700 146 Pfam PF01627 Hpt domain 28 100 7.1E-9 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJD35_RS09640 8602b321f7c0ab0d856e5983091e7700 146 SUPERFAMILY SSF47226 6 118 2.22E-17 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CJD35_RS09640 8602b321f7c0ab0d856e5983091e7700 146 Gene3D G3DSA:1.20.120.160 4 118 2.5E-13 T 28-03-2018 CJD35_RS19910 30ca864133f01e79ddca59f1c19d81e3 169 Pfam PF10881 Protein of unknown function (DUF2726) 39 133 5.1E-17 T 28-03-2018 IPR024402 Domain of unknown function DUF2726 CJD35_RS07210 6595f342f37bbd6f2fca202cb54e1dc0 182 Pfam PF07811 TadE-like protein 19 56 6.5E-7 T 28-03-2018 IPR012495 TadE-like CJD35_RS04185 8c7e92156843a4edba295733c978cbbb 131 PIRSF PIRSF018297 5 131 2.5E-37 T 28-03-2018 IPR006440 Death on curing protein GO:0016301 CJD35_RS04185 8c7e92156843a4edba295733c978cbbb 131 Gene3D G3DSA:1.10.3290.10 10 131 1.4E-11 T 28-03-2018 IPR003812 Fido domain CJD35_RS04185 8c7e92156843a4edba295733c978cbbb 131 Pfam PF02661 Fic/DOC family 10 89 1.0E-9 T 28-03-2018 IPR003812 Fido domain CJD35_RS04185 8c7e92156843a4edba295733c978cbbb 131 SUPERFAMILY SSF140931 50 99 1.09E-6 T 28-03-2018 IPR003812 Fido domain CJD35_RS04185 8c7e92156843a4edba295733c978cbbb 131 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 18 125 6.3E-17 T 28-03-2018 IPR006440 Death on curing protein GO:0016301 CJD35_RS13680 ce1f41ef8ab2a10e2ab76a49b327eb5e 165 Pfam PF11650 P22 tail accessory factor 20 112 1.2E-4 T 28-03-2018 IPR020362 Tail accessory factor GP4 CJD35_RS07730 82284580a57a7357d62c7113ea3fc64c 77 Pfam PF11390 NADH-dependant formate dehydrogenase delta subunit FdsD 13 72 2.3E-21 T 28-03-2018 IPR021074 Formate dehydrogenase, delta subunit CJD35_RS21905 cee640fe5e3c159921828c5f1ead9f60 385 Pfam PF03743 Bacterial conjugation TrbI-like protein 206 376 9.5E-50 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CJD35_RS19950 2cb80d1d8a5e1228fcf4e1d663e10993 271 Gene3D G3DSA:2.20.70.10 15 45 7.4E-4 T 28-03-2018 CJD35_RS07345 36d2a2263f3680b12e833b8aff0cc31c 113 PIRSF PIRSF039032 1 108 5.1E-28 T 28-03-2018 IPR009387 Toxin HigB-2 CJD35_RS07345 36d2a2263f3680b12e833b8aff0cc31c 113 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 14 108 2.6E-15 T 28-03-2018 IPR009387 Toxin HigB-2 CJD35_RS17385 cdbb9b2d1ddce1d53bb1aa9177a91031 449 Pfam PF00860 Permease family 29 406 2.8E-40 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CJD35_RS17385 cdbb9b2d1ddce1d53bb1aa9177a91031 449 PIRSF PIRSF005353 6 448 1.1E-166 T 28-03-2018 IPR026033 Purine permease PbuG-like CJD35_RS05305 35e0be317b09fc0aad59d5e6841a5653 266 Pfam PF04335 VirB8 protein 22 225 6.0E-66 T 28-03-2018 IPR007430 Bacterial virulence protein VirB8 GO:0016020 CJD35_RS05305 35e0be317b09fc0aad59d5e6841a5653 266 SUPERFAMILY SSF54427 93 226 3.02E-24 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS16820 9b35e5ce46ac8591323996283679edf8 341 SUPERFAMILY SSF51556 4 335 7.33E-91 T 28-03-2018 IPR032466 Metal-dependent hydrolase CJD35_RS16820 9b35e5ce46ac8591323996283679edf8 341 Gene3D G3DSA:3.20.20.140 3 340 4.7E-58 T 28-03-2018 CJD35_RS16820 9b35e5ce46ac8591323996283679edf8 341 Pfam PF04909 Amidohydrolase 5 330 7.0E-57 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CJD35_RS04375 5c2649b077d5eadd6d634f1973dc6419 188 Pfam PF01169 Uncharacterized protein family UPF0016 103 177 1.1E-5 T 28-03-2018 IPR001727 Gdt1 family CJD35_RS04375 5c2649b077d5eadd6d634f1973dc6419 188 Pfam PF01169 Uncharacterized protein family UPF0016 7 82 3.5E-13 T 28-03-2018 IPR001727 Gdt1 family CJD35_RS01395 1a7ac11729966987dddb34712c8e0956 115 Gene3D G3DSA:3.40.1440.10 4 95 2.3E-16 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS01395 1a7ac11729966987dddb34712c8e0956 115 SUPERFAMILY SSF82771 5 92 1.05E-20 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS01395 1a7ac11729966987dddb34712c8e0956 115 Pfam PF01541 GIY-YIG catalytic domain 6 78 2.4E-13 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS01395 1a7ac11729966987dddb34712c8e0956 115 SMART SM00465 5 83 4.1E-4 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS06565 2ef65eed2368d29adcee9cabaabfcbb6 308 Pfam PF13469 Sulfotransferase family 70 257 4.7E-43 T 28-03-2018 CJD35_RS06565 2ef65eed2368d29adcee9cabaabfcbb6 308 SUPERFAMILY SSF52540 68 302 3.75E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS06565 2ef65eed2368d29adcee9cabaabfcbb6 308 Gene3D G3DSA:3.40.50.300 5 295 3.6E-39 T 28-03-2018 CJD35_RS15400 93cd24df4a501b8dd77a28d694006846 151 Gene3D G3DSA:3.10.450.50 2 150 8.8E-34 T 28-03-2018 CJD35_RS15400 93cd24df4a501b8dd77a28d694006846 151 Pfam PF13577 SnoaL-like domain 7 136 4.5E-29 T 28-03-2018 IPR009959 Polyketide cyclase SnoaL-like domain CJD35_RS15400 93cd24df4a501b8dd77a28d694006846 151 SUPERFAMILY SSF54427 1 147 6.5E-38 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS09575 9eb67cdfc66eda2259791353c9c546ba 106 Pfam PF05521 Phage head-tail joining protein 8 100 2.9E-17 T 28-03-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor CJD35_RS09575 9eb67cdfc66eda2259791353c9c546ba 106 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 6 95 1.3E-7 T 28-03-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor CJD35_RS17815 84d469de0370215fba5e399350288d56 200 SUPERFAMILY SSF52833 40 165 6.29E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS17815 84d469de0370215fba5e399350288d56 200 Gene3D G3DSA:3.40.30.10 36 194 9.0E-13 T 28-03-2018 CJD35_RS11455 9b629af9ded0d5d1de15098d93fa9278 118 Gene3D G3DSA:2.40.10.180 3 113 2.4E-5 T 28-03-2018 CJD35_RS05765 5b5d720135948bf26fa4a51c5861d0e6 185 Gene3D G3DSA:3.20.20.70 10 184 7.6E-16 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CJD35_RS05765 5b5d720135948bf26fa4a51c5861d0e6 185 Pfam PF02581 Thiamine monophosphate synthase 16 181 7.9E-19 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CJD35_RS05765 5b5d720135948bf26fa4a51c5861d0e6 185 SUPERFAMILY SSF51391 10 183 1.44E-26 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CJD35_RS08990 84ae31a9cc25efa0bf9759a493df8f9c 183 Pfam PF02643 Uncharacterized ACR, COG1430 61 164 4.9E-30 T 28-03-2018 IPR003795 Protein of unknown function DUF192 CJD35_RS16210 0d98f3b7076f674aa2f8533f667b454b 65 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 56 1.0E-13 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CJD35_RS11325 9e071fe79d18a65e8da2106e999ca934 304 Pfam PF01925 Sulfite exporter TauE/SafE 18 287 5.3E-44 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CJD35_RS10985 6675ef2e6aa8c5e1c5a4908c622a84b4 211 Gene3D G3DSA:3.40.1000.10 57 193 5.8E-10 T 28-03-2018 CJD35_RS20195 cdeb98ef55140c6e500789e062015cee 164 Pfam PF05443 ROS/MUCR transcriptional regulator protein 11 131 1.9E-51 T 28-03-2018 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 CJD35_RS07560 446a71531b12339de4cd3a10925aa1bd 224 Gene3D G3DSA:3.10.450.50 21 151 1.7E-8 T 28-03-2018 CJD35_RS07560 446a71531b12339de4cd3a10925aa1bd 224 SUPERFAMILY SSF54427 46 139 9.57E-9 T 28-03-2018 IPR032710 NTF2-like domain CJD35_RS05235 8633370d3e91e545ed224d2a672e375b 344 PIRSF PIRSF015268 1 339 9.0E-133 T 28-03-2018 IPR011204 Virulence protein RhuM-like CJD35_RS05235 8633370d3e91e545ed224d2a672e375b 344 Pfam PF13310 Virulence protein RhuM family 61 309 3.7E-104 T 28-03-2018 IPR011204 Virulence protein RhuM-like CJD35_RS20125 711e0e075780e2bc1d42cd66bc498729 68 Pfam PF14454 Prokaryotic Ubiquitin 2 66 9.7E-16 T 28-03-2018 IPR032866 Prokaryotic Ubiquitin CJD35_RS05805 090566cd9160b8980fe93664a4419e86 224 Pfam PF13649 Methyltransferase domain 55 143 8.7E-9 T 28-03-2018 CJD35_RS05805 090566cd9160b8980fe93664a4419e86 224 Gene3D G3DSA:3.40.50.150 2 218 8.9E-19 T 28-03-2018 CJD35_RS05805 090566cd9160b8980fe93664a4419e86 224 SUPERFAMILY SSF53335 35 213 1.31E-16 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CJD35_RS16085 f1f658a499f7d56b219d2cd455d0511b 559 SUPERFAMILY SSF55874 26 150 1.09E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS16085 f1f658a499f7d56b219d2cd455d0511b 559 Gene3D G3DSA:3.30.565.10 13 183 5.1E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CJD35_RS14010 634b6d4238e961079ee9a5e904eda39f 391 Pfam PF05762 VWA domain containing CoxE-like protein 184 270 1.1E-10 T 28-03-2018 IPR008912 Uncharacterised protein family CoxE-like CJD35_RS04480 60dbbcfa4dc34e44eb6585a3d19a4512 491 Pfam PF13440 Polysaccharide biosynthesis protein 33 323 5.7E-11 T 28-03-2018 CJD35_RS15115 0df5b8283bb5ad98bb23dafbbc24b1ba 426 Pfam PF00999 Sodium/hydrogen exchanger family 19 408 8.5E-38 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CJD35_RS19975 0a568d331ec56a3022168d0abc110b61 109 Gene3D G3DSA:3.40.50.150 12 103 3.3E-4 T 28-03-2018 CJD35_RS05455 ae85a6cade33287660bf0f03fc0ebb78 312 Pfam PF01925 Sulfite exporter TauE/SafE 64 307 1.1E-24 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CJD35_RS11600 80dfb404540ef546f917f9407dad594f 132 Pfam PF04120 Low affinity iron permease 5 117 2.2E-50 T 28-03-2018 IPR007251 Low affinity iron permease, Fet4 GO:0055085 CJD35_RS08665 cdd34429fff82da4352629acb1a630df 330 Pfam PF01757 Acyltransferase family 1 300 2.3E-21 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CJD35_RS16785 d8a82110e1b822d689252e04363b6606 103 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 92 2.8E-11 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CJD35_RS15285 66b5a5d1dea1185edf6ce9e9b0cc49cf 215 Gene3D G3DSA:3.40.50.410 25 149 8.3E-11 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS15285 66b5a5d1dea1185edf6ce9e9b0cc49cf 215 SUPERFAMILY SSF53300 39 145 3.15E-11 T 28-03-2018 IPR002035 von Willebrand factor, type A CJD35_RS13365 e80187f70b684c0514ae2304aa83b1b0 594 Gene3D G3DSA:3.40.50.880 211 452 1.5E-5 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CJD35_RS13275 581c698f282a92b9f2fafbf5088a7eb5 78 Pfam PF11003 Protein of unknown function (DUF2842) 14 74 5.6E-15 T 28-03-2018 IPR021265 Protein of unknown function DUF2842 CJD35_RS07610 52e36001de311f5e0a14fcf3de721c0c 280 Pfam PF06629 MltA-interacting protein MipA 33 280 8.6E-31 T 28-03-2018 IPR010583 MltA-interacting MipA CJD35_RS02260 54009416b864c93386a849705038e14f 77 Pfam PF04588 Hypoxia induced protein conserved region 10 69 2.4E-10 T 28-03-2018 IPR007667 Hypoxia induced protein, domain CJD35_RS15205 64cdbb31b84036b4d09240f568b4de5c 210 Pfam PF02585 GlcNAc-PI de-N-acetylase 1 131 6.0E-18 T 28-03-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 CJD35_RS15205 64cdbb31b84036b4d09240f568b4de5c 210 Gene3D G3DSA:3.40.50.10320 1 205 2.3E-26 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CJD35_RS15205 64cdbb31b84036b4d09240f568b4de5c 210 SUPERFAMILY SSF102588 1 197 4.97E-27 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CJD35_RS07190 c61b561b2d8b44c1e7d2071dd05b901b 79 Pfam PF13711 Domain of unknown function (DUF4160) 10 75 8.2E-13 T 28-03-2018 IPR025427 Protein of unknown function DUF4160 CJD35_RS06480 cf4cb5f59d46c8556e73e1e3a950bea3 145 SUPERFAMILY SSF143744 16 140 1.7E-35 T 28-03-2018 CJD35_RS06480 cf4cb5f59d46c8556e73e1e3a950bea3 145 Pfam PF03928 Haem-degrading 14 137 8.1E-31 T 28-03-2018 IPR005624 Haem-degrading CJD35_RS15065 9b73fffa712594faa118e1952ff20add 384 SUPERFAMILY SSF51695 11 32 6.8E-21 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CJD35_RS15065 9b73fffa712594faa118e1952ff20add 384 SUPERFAMILY SSF51695 72 104 6.8E-21 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CJD35_RS15065 9b73fffa712594faa118e1952ff20add 384 SUPERFAMILY SSF51695 136 272 6.8E-21 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CJD35_RS15065 9b73fffa712594faa118e1952ff20add 384 Gene3D G3DSA:3.20.20.190 6 269 6.9E-24 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CJD35_RS15065 9b73fffa712594faa118e1952ff20add 384 Pfam PF16670 Phosphoinositide phospholipase C, Ca2+-dependent 14 364 3.0E-93 T 28-03-2018 IPR032075 Phosphoinositide phospholipase C, Ca2+-dependent CJD35_RS08505 5b76af02b24193a19bfa0d7c84d3efaf 122 Pfam PF06803 Protein of unknown function (DUF1232) 32 68 6.3E-13 T 28-03-2018 IPR010652 Protein of unknown function DUF1232 CJD35_RS12775 55735fe02dbe8a5669ca93b438cd984f 416 Pfam PF02687 FtsX-like permease family 302 409 2.1E-12 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CJD35_RS12775 55735fe02dbe8a5669ca93b438cd984f 416 Pfam PF12704 MacB-like periplasmic core domain 30 216 3.7E-13 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CJD35_RS12775 55735fe02dbe8a5669ca93b438cd984f 416 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 6 416 1.3E-120 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CJD35_RS16000 ffb1fe14dfd23ed2bce9effebdd9b5b3 668 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 171 551 1.7E-127 T 28-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain CJD35_RS16000 ffb1fe14dfd23ed2bce9effebdd9b5b3 668 Gene3D G3DSA:3.40.50.300 134 566 4.4E-43 T 28-03-2018 CJD35_RS16000 ffb1fe14dfd23ed2bce9effebdd9b5b3 668 SUPERFAMILY SSF52540 179 550 2.19E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS20460 dce5a2698d7e3a86cd1fadbb1b3ae556 402 Gene3D G3DSA:1.10.10.10 254 401 2.4E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS10230 300e229f198ff6be4b5a6f55948b7e38 290 Gene3D G3DSA:2.40.160.10 35 290 1.7E-4 T 28-03-2018 CJD35_RS10230 300e229f198ff6be4b5a6f55948b7e38 290 Pfam PF11231 Protein of unknown function (DUF3034) 36 287 1.9E-93 T 28-03-2018 IPR021393 Protein of unknown function DUF3034 CJD35_RS00325 3d52411b8c7868834cfb05014c1f1be1 65 Pfam PF09550 Phage tail assembly chaperone protein, TAC 10 65 1.2E-10 T 28-03-2018 IPR019056 Phage tail assembly chaperone protein, TAC6 CJD35_RS02485 69e3ef8e3280dbc9131bbe1b81bfe0e3 162 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 153 3.9E-23 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CJD35_RS02275 6b9906fdef08a498411dec273a377618 348 Pfam PF06674 Protein of unknown function (DUF1176) 32 344 4.8E-70 T 28-03-2018 IPR009560 Protein of unknown function DUF1176 CJD35_RS03820 dcd05c562ac5d16b4d508da1dc855b32 110 TIGRFAM TIGR04433 UrcA_uranyl: UrcA family protein 7 106 2.0E-17 T 28-03-2018 IPR030972 UrcA family protein CJD35_RS20140 5b5896b107ec4477388f2afb1d27ed71 117 Pfam PF12599 Protein of unknown function (DUF3768) 48 116 3.6E-21 T 28-03-2018 IPR022243 Protein of unknown function DUF3768 CJD35_RS19380 b437ae2249104258cb0761a5ba760ea8 177 Pfam PF01526 Tn3 transposase DDE domain 1 110 3.0E-35 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CJD35_RS21930 b20ca97bfee4c11208caf236ba64047a 144 Gene3D G3DSA:3.40.50.720 6 112 6.4E-4 T 28-03-2018 CJD35_RS08920 931c752199d580addf25d7ccdef96854 177 SUPERFAMILY SSF160443 84 174 7.06E-8 T 28-03-2018 IPR002625 Smr domain CJD35_RS08920 931c752199d580addf25d7ccdef96854 177 Pfam PF01713 Smr domain 86 174 2.0E-15 T 28-03-2018 IPR002625 Smr domain CJD35_RS01045 4444d229650b38348ae067312f07302d 584 Pfam PF05960 Bacterial protein of unknown function (DUF885) 42 574 1.9E-160 T 28-03-2018 IPR010281 Protein of unknown function DUF885 CJD35_RS17990 b22a62277eeef35d6d6c4cdcc9ca9ec9 213 Pfam PF06532 Protein of unknown function (DUF1109) 10 213 1.5E-64 T 28-03-2018 IPR009495 Anti-sigma-F factor NrsF CJD35_RS03110 8c8b8835d52d63fea438ca8ae3f46f94 207 Pfam PF03748 Flagellar basal body-associated protein FliL 107 207 1.9E-19 T 28-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CJD35_RS12620 69059b6b50cbfa1107b3bd7287a54d6e 298 Pfam PF01963 TraB family 38 296 2.0E-60 T 28-03-2018 IPR002816 Pheromone shutdown, TraB CJD35_RS11010 60182da4460d693183968407d4761179 94 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 7 90 1.2E-36 T 28-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CJD35_RS16555 13f2ad630071a3e2ab7feae8f14f176a 168 Pfam PF14352 Domain of unknown function (DUF4402) 43 167 4.1E-24 T 28-03-2018 IPR025514 Protein of unknown function DUF4402 CJD35_RS17375 17480cdb23b9a820193acac36d879c8a 378 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 12 322 6.4E-91 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter CJD35_RS17375 17480cdb23b9a820193acac36d879c8a 378 PIRSF PIRSF026166 3 336 3.7E-115 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter CJD35_RS16465 14c68dcf49a999343fccd9079d0652b9 404 Pfam PF07786 Protein of unknown function (DUF1624) 29 255 3.5E-16 T 28-03-2018 IPR012429 Domain of unknown function DUF1624 Reactome: R-HSA-2024096|Reactome: R-HSA-6798695 CJD35_RS01425 c180f1cdfe1997720bd55f16282d8492 61 Pfam PF04964 Flp/Fap pilin component 17 56 9.3E-13 T 28-03-2018 IPR007047 Flp/Fap pilin component CJD35_RS01065 fe944baac9bfcfb81e71c2af19db70bc 218 Gene3D G3DSA:1.20.1050.10 99 193 1.4E-16 T 28-03-2018 CJD35_RS01065 fe944baac9bfcfb81e71c2af19db70bc 218 SUPERFAMILY SSF47616 85 203 3.84E-15 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CJD35_RS01065 fe944baac9bfcfb81e71c2af19db70bc 218 Pfam PF13410 Glutathione S-transferase, C-terminal domain 134 202 1.4E-6 T 28-03-2018 CJD35_RS01065 fe944baac9bfcfb81e71c2af19db70bc 218 SUPERFAMILY SSF52833 6 87 1.65E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS01065 fe944baac9bfcfb81e71c2af19db70bc 218 Gene3D G3DSA:3.40.30.10 2 98 2.5E-17 T 28-03-2018 CJD35_RS01065 fe944baac9bfcfb81e71c2af19db70bc 218 Pfam PF13417 Glutathione S-transferase, N-terminal domain 8 82 2.5E-11 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CJD35_RS19845 7e4fcd7eca8221bbf39185a180030259 133 Gene3D G3DSA:3.40.1620.10 34 85 3.0E-5 T 28-03-2018 CJD35_RS17465 33aa1525964878572ca0bf520e72a5f7 192 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 3 178 3.7E-59 T 28-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CJD35_RS17465 33aa1525964878572ca0bf520e72a5f7 192 SUPERFAMILY SSF102405 1 178 2.44E-61 T 28-03-2018 CJD35_RS17465 33aa1525964878572ca0bf520e72a5f7 192 Pfam PF03641 Possible lysine decarboxylase 45 174 6.8E-40 T 28-03-2018 IPR031100 LOG family CJD35_RS17465 33aa1525964878572ca0bf520e72a5f7 192 Gene3D G3DSA:3.40.50.450 1 192 4.6E-61 T 28-03-2018 CJD35_RS05710 fc1ef4fbfe81bdefef0f3918f9e11188 223 Pfam PF07486 Cell Wall Hydrolase 120 222 5.8E-25 T 28-03-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 CJD35_RS15935 17d6003d5560fe2cd38f6b3cacbb5c78 214 SUPERFAMILY SSF56935 39 212 2.23E-24 T 28-03-2018 CJD35_RS15935 17d6003d5560fe2cd38f6b3cacbb5c78 214 Gene3D G3DSA:2.40.170.20 2 212 6.6E-23 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS15935 17d6003d5560fe2cd38f6b3cacbb5c78 214 Pfam PF00593 TonB dependent receptor 36 211 1.8E-14 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CJD35_RS01650 83a188e60021ff2d8745d60e24757060 434 Pfam PF01943 Polysaccharide biosynthesis protein 14 282 1.3E-11 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CJD35_RS13925 15edfd1ac7c1c51b03b0789aa9f9bfe8 233 Pfam PF07750 GcrA cell cycle regulator 2 213 5.2E-40 T 28-03-2018 IPR011681 GcrA cell cycle regulator CJD35_RS13925 15edfd1ac7c1c51b03b0789aa9f9bfe8 233 Gene3D G3DSA:1.10.10.60 2 48 2.0E-7 T 28-03-2018 CJD35_RS15270 e168a5268e9d0e56ff38ffa413629885 222 Pfam PF13785 Domain of unknown function (DUF4178) 56 201 2.0E-17 T 28-03-2018 IPR025235 Domain of unknown function DUF4178 CJD35_RS16780 57e66562e122188530ce9a195ba5100c 81 Gene3D G3DSA:1.10.1220.10 3 44 7.7E-7 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CJD35_RS09800 eaea553244824a7ff1c5e92abca3cd11 239 Pfam PF02592 Putative vitamin uptake transporter 54 212 2.6E-52 T 28-03-2018 IPR003744 Queuosine precursor transporter CJD35_RS09800 eaea553244824a7ff1c5e92abca3cd11 239 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 25 219 5.3E-36 T 28-03-2018 IPR003744 Queuosine precursor transporter CJD35_RS10120 3f08d42bcf745e1a98bd9cf239d4c038 281 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 6 247 2.2E-33 T 28-03-2018 IPR010239 Conserved hypothetical protein CHP02001 CJD35_RS10120 3f08d42bcf745e1a98bd9cf239d4c038 281 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 24 246 9.3E-53 T 28-03-2018 IPR010239 Conserved hypothetical protein CHP02001 CJD35_RS03095 afbe85dd3f4a08a5a931038b46997734 87 Pfam PF04347 Flagellar biosynthesis protein, FliO 24 80 9.4E-7 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CJD35_RS07810 e4e16a2e8e2345cf829ae3aa7e088d91 140 Pfam PF13430 Domain of unknown function (DUF4112) 27 128 3.0E-31 T 28-03-2018 IPR025187 Protein of unknown function DUF4112 CJD35_RS03315 c832fc693bc81e97e2fc90a2ded2b5c9 304 Gene3D G3DSA:2.40.160.20 6 304 1.7E-4 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CJD35_RS13290 aef1f19f4570430bbf2bb2c07a2ba162 384 Pfam PF01594 AI-2E family transporter 28 349 3.3E-44 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CJD35_RS06805 0a2102daeb8b53c9388875cea1e64ffa 217 Pfam PF06912 Protein of unknown function (DUF1275) 12 202 1.4E-33 T 28-03-2018 IPR010699 Protein of unknown function DUF1275 CJD35_RS14860 f8b91ae256f91ac399d193202c8556f3 122 Pfam PF06877 Regulator of ribonuclease activity B 18 114 3.8E-16 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain CJD35_RS14860 f8b91ae256f91ac399d193202c8556f3 122 SUPERFAMILY SSF89946 3 116 3.66E-20 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain CJD35_RS14860 f8b91ae256f91ac399d193202c8556f3 122 Gene3D G3DSA:3.30.70.970 10 117 3.6E-16 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain CJD35_RS15375 d734c6808e76122409bc209504768dde 422 Gene3D G3DSA:2.60.120.600 270 377 3.6E-7 T 28-03-2018 IPR010621 Domain of unknown function DUF1214 CJD35_RS08160 47af54feff5812505cb54bf0200bccbe 215 Gene3D G3DSA:2.60.450.10 112 215 2.1E-8 T 28-03-2018 CJD35_RS17285 ebb9d8bece8dba88a2d1fa5071aabb39 34 Pfam PF10617 Protein of unknown function (DUF2474) 6 31 4.2E-8 T 28-03-2018 IPR018895 Protein of unknown function DUF2474 CJD35_RS07155 a14bbe8df1b52195cf56c05230fd2140 294 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 15 271 5.0E-40 T 28-03-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 CJD35_RS09350 cc7ceea02b5ca98083455f2a6cca655f 138 Pfam PF04138 GtrA-like protein 20 137 6.1E-22 T 28-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CJD35_RS10555 22c4c4112660e4cd7e79da0df87295da 259 Pfam PF01925 Sulfite exporter TauE/SafE 12 245 3.1E-43 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CJD35_RS14340 6ab32d8015be32b104737678fce0dd61 362 Pfam PF10098 Uncharacterised protein conserved in bacteria (DUF2336) 172 336 1.4E-8 T 28-03-2018 IPR019285 Protein of unknown function DUF2336 CJD35_RS15910 8f3991944318b1ff44af69f2bdcda41a 471 Gene3D G3DSA:3.40.50.980 129 369 2.2E-4 T 28-03-2018 CJD35_RS09925 e53a8f382061765cdba722614e12f07d 153 Pfam PF00578 AhpC/TSA family 5 131 2.1E-36 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CJD35_RS09925 e53a8f382061765cdba722614e12f07d 153 Gene3D G3DSA:3.40.30.10 1 153 1.1E-39 T 28-03-2018 CJD35_RS09925 e53a8f382061765cdba722614e12f07d 153 SUPERFAMILY SSF52833 1 153 2.09E-49 T 28-03-2018 IPR012336 Thioredoxin-like fold CJD35_RS09975 86c17690fbf37f2510c61c18223c540b 355 Pfam PF00487 Fatty acid desaturase 69 333 5.2E-32 T 28-03-2018 IPR005804 Fatty acid desaturase domain GO:0006629 CJD35_RS06700 766c56cf3d94323064967e49be5c0c26 192 Pfam PF01169 Uncharacterized protein family UPF0016 6 80 1.9E-21 T 28-03-2018 IPR001727 Gdt1 family CJD35_RS06700 766c56cf3d94323064967e49be5c0c26 192 Pfam PF01169 Uncharacterized protein family UPF0016 105 180 4.8E-21 T 28-03-2018 IPR001727 Gdt1 family CJD35_RS05370 8ad4dea4fe309f8ab5089233aa995e2d 283 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 32 259 2.3E-30 T 28-03-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system CJD35_RS05100 d8934c387c3023c6c2e5696dc9aa29a8 235 Pfam PF10074 Uncharacterized conserved protein (DUF2285) 123 214 1.3E-19 T 28-03-2018 IPR018754 Protein of unknown function DUF2285 CJD35_RS22105 6120d1e653768e1789cba39d21fb6476 285 Pfam PF05045 Rhamnan synthesis protein F 3 120 1.4E-16 T 28-03-2018 IPR007739 Rhamnan synthesis F CJD35_RS22105 6120d1e653768e1789cba39d21fb6476 285 Gene3D G3DSA:3.40.50.1000 156 283 3.2E-4 T 28-03-2018 IPR023214 HAD-like domain CJD35_RS14810 a9e724ca6124cf9370e8e7446214919d 103 Pfam PF04977 Septum formation initiator 23 102 4.5E-11 T 28-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CJD35_RS05405 9e30bb22a209b3f7db7d40e9eee0be24 205 Gene3D G3DSA:1.25.40.10 3 197 1.1E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CJD35_RS08890 f88873881cdf878c522acce450fd7496 218 Pfam PF13590 Domain of unknown function (DUF4136) 40 202 5.9E-21 T 28-03-2018 IPR025411 Domain of unknown function DUF4136 CJD35_RS16975 fc06f534986989073fa558208a78c0f8 195 Pfam PF08856 Protein of unknown function (DUF1826) 20 190 4.7E-27 T 28-03-2018 IPR014955 Protein of unknown function DUF1826 CJD35_RS18600 98d594c435151fba9aac828f053c8d14 215 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 39 138 2.9E-26 T 28-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CJD35_RS12945 2ea2a75e12cb59a6c07cb4442f34515e 239 Pfam PF10014 2OG-Fe dioxygenase 48 235 1.2E-63 T 28-03-2018 IPR018724 2OG-Fe dioxygenase CJD35_RS00355 8f35e2ddedc76f5fc9b35fd7a859f9c1 180 Pfam PF05135 Phage gp6-like head-tail connector protein 14 53 2.5E-5 T 28-03-2018 IPR021146 Phage gp6-like head-tail connector protein CJD35_RS00355 8f35e2ddedc76f5fc9b35fd7a859f9c1 180 TIGRFAM TIGR02215 phage_chp_gp8: phage conserved hypothetical protein, phiE125 gp8 family 2 179 2.3E-22 T 28-03-2018 IPR011738 Phage conserved hypothetical protein CJD35_RS00650 12f5d595ea946d6128212e0e431d0ccf 333 Pfam PF02562 PhoH-like protein 126 329 8.0E-87 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 CJD35_RS00650 12f5d595ea946d6128212e0e431d0ccf 333 Gene3D G3DSA:3.40.50.300 122 322 2.3E-25 T 28-03-2018 CJD35_RS00650 12f5d595ea946d6128212e0e431d0ccf 333 SUPERFAMILY SSF52540 125 304 2.08E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CJD35_RS03555 bee93ef5a51891351864983e5f303215 175 Pfam PF12276 Protein of unknown function (DUF3617) 1 171 2.6E-37 T 28-03-2018 IPR022061 Protein of unknown function DUF3617 CJD35_RS10955 c8615330d8e43cc0c5c761df0ba1da0f 310 Pfam PF05661 Protein of unknown function (DUF808) 3 301 9.7E-126 T 28-03-2018 IPR008526 Inner membrane protein YedI CJD35_RS10955 c8615330d8e43cc0c5c761df0ba1da0f 310 PIRSF PIRSF016660 1 310 8.4E-115 T 28-03-2018 IPR008526 Inner membrane protein YedI CJD35_RS13585 b8e324dd39b35ccc2d724ede75506c33 136 Gene3D G3DSA:1.10.10.10 1 74 1.5E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CJD35_RS20900 817b0bac279a066c502f34d02f5a25be 113 Pfam PF04956 TrbC/VIRB2 family 28 111 1.3E-21 T 28-03-2018 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 CJD35_RS01680 98843b6ea7e1d71e6b9de5987a27c593 301 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 293 9.9E-83 T 28-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 CJD35_RS05175 c70e96039adb9fc11bb5d8e5db18876b 106 Pfam PF05284 Protein of unknown function (DUF736) 4 104 3.3E-29 T 28-03-2018 IPR007948 Protein of unknown function DUF736 CJD35_RS08980 c97fa7c89d8b68cae5a763ecd3b87f83 166 Pfam PF09923 Uncharacterized protein conserved in bacteria (DUF2155) 63 156 1.7E-24 T 28-03-2018 IPR019225 Protein of unknown function DUF2155 CJD35_RS08780 36cef39df6bcd9df80ca19308889edc1 127 Pfam PF06170 Protein of unknown function (DUF983) 35 119 6.4E-27 T 28-03-2018 IPR009325 Protein of unknown function DUF983 CJD35_RS11575 b2d55807d3a9b6723a126a20d413af90 381 Pfam PF07505 Protein of unknown function (DUF5131) 5 380 2.2E-100 T 28-03-2018 IPR011101 Protein of unknown function DUF5131 CJD35_RS15055 59c750ade206d0ce429c3170b32d805e 417 Pfam PF02698 DUF218 domain 270 362 1.9E-12 T 28-03-2018 IPR003848 Domain of unknown function DUF218 CJD35_RS15055 59c750ade206d0ce429c3170b32d805e 417 Gene3D G3DSA:3.40.50.620 241 365 1.9E-16 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CJD35_RS10615 afcfcf27ebaf124825234de47e35efa6 170 Pfam PF02674 Colicin V production protein 4 150 2.7E-29 T 28-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CJD35_RS18755 014704d1e8461fc13977bdfc048f83e0 89 Pfam PF06233 Usg-like family 9 87 3.2E-37 T 28-03-2018 IPR009354 Usg-like CJD35_RS00830 ff7f5cbabc36258d0f314ddd9337243b 112 Pfam PF10984 Protein of unknown function (DUF2794) 15 99 3.5E-38 T 28-03-2018 IPR021252 Protein of unknown function DUF2794 CJD35_RS17275 39d178b094ceb1c52460bdb2a47660a9 469 Pfam PF10011 Predicted membrane protein (DUF2254) 13 400 6.8E-122 T 28-03-2018 IPR018723 Protein of unknown function DUF2254, membrane CJD35_RS00780 aeb234d6d2d06893485b09b6c73cda71 232 Pfam PF02104 SURF1 family 23 216 4.1E-42 T 28-03-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CJD35_RS16045 50913355e387b46a130e3cb533aa5409 135 Pfam PF08797 HIRAN domain 27 79 1.3E-9 T 28-03-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 CJD35_RS08510 80e7e672838817a77a0cd0031d0b75b6 126 Pfam PF04519 Polymer-forming cytoskeletal 12 105 7.1E-23 T 28-03-2018 IPR007607 Protein of unknown function DUF583 CJD35_RS10905 65f18d1470c213042bc49a2cf043549b 352 Gene3D G3DSA:3.90.226.10 1 329 2.2E-90 T 28-03-2018 CJD35_RS10905 65f18d1470c213042bc49a2cf043549b 352 Pfam PF16113 Enoyl-CoA hydratase/isomerase 13 335 1.5E-119 T 28-03-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 CJD35_RS10905 65f18d1470c213042bc49a2cf043549b 352 SUPERFAMILY SSF52096 244 321 4.48E-62 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS10905 65f18d1470c213042bc49a2cf043549b 352 SUPERFAMILY SSF52096 5 186 4.48E-62 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CJD35_RS22110 5306c727dc2a610a0c2141cb6dcc802f 221 Pfam PF05045 Rhamnan synthesis protein F 113 206 1.1E-26 T 28-03-2018 IPR007739 Rhamnan synthesis F CJD35_RS13055 f5312efeffef45f7dc1bb686b71d88a4 223 Pfam PF09997 Predicted membrane protein (DUF2238) 49 196 2.6E-47 T 28-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 CJD35_RS17270 7300eab1c77de2b99a19d4e28d851d7d 425 Pfam PF00999 Sodium/hydrogen exchanger family 15 414 5.5E-64 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CJD35_RS14195 d3a827c5de7aa8cc4fea28be7ccf5c14 240 Pfam PF01203 Type II secretion system (T2SS), protein N 41 225 8.7E-23 T 28-03-2018 IPR022792 Type II secretion system, protein N CJD35_RS18850 d826e8b2805b35fcbb1f1769fbb39fa5 278 SUPERFAMILY SSF82771 191 277 5.1E-6 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS18850 d826e8b2805b35fcbb1f1769fbb39fa5 278 Gene3D G3DSA:3.40.1440.10 188 278 3.4E-6 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CJD35_RS01705 dbbe034bc090c5bff1581beb9a7c012c 229 Pfam PF16357 Putative PepSY_TM-like 33 229 5.5E-79 T 28-03-2018 IPR032307 Putative PepSY TM-like protein CJD35_RS11840 370954c2ef7471e5b7d5ac759f22198c 322 Pfam PF01757 Acyltransferase family 19 306 2.0E-13 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CJD35_RS15155 ab5e7c54ee8a05a95b30a8cdcfa979ec 164 Pfam PF11736 Protein of unknown function (DUF3299) 58 149 1.9E-6 T 28-03-2018 IPR021727 Protein of unknown function DUF3299 CJD35_RS11660 0870f8c31bfda9d57c824918748e8c53 310 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 307 2.6E-86 T 28-03-2018 IPR007296 Domain of unknown function DUF403 CJD35_RS00075 e8a6035cd102dbc9b8252088f9d543ac 114 Pfam PF06305 Lipopolysaccharide assembly protein A domain 25 81 4.5E-8 T 28-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CJD35_RS00300 d786c372982658632ed6b6afc0736d42 746 Pfam PF13550 Putative phage tail protein 248 402 1.5E-20 T 28-03-2018 IPR032876 Tip attachment protein J CJD35_RS04430 cf36f905555e1fa44b173181ea570c13 526 Pfam PF13520 Amino acid permease 25 464 3.6E-46 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CJD35_RS04430 cf36f905555e1fa44b173181ea570c13 526 PIRSF PIRSF006060 10 510 1.6E-78 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CJD35_RS21900 ed1d70cd58d7669a76b22f14f5288cfc 279 Pfam PF03524 Conjugal transfer protein 32 255 2.9E-58 T 28-03-2018 IPR010258 Conjugal transfer, TrbG/VirB9/CagX CJD35_RS19240 073a13138ef3425ab866a33f66297cd7 179 Pfam PF05443 ROS/MUCR transcriptional regulator protein 26 147 8.1E-47 T 28-03-2018 IPR008807 ROSMUCR transcriptional regulator GO:0003677|GO:0006355|GO:0008270 CJD35_RS00105 ad9af243dd33b8bb59c4061a37b9f825 59 Pfam PF04325 Protein of unknown function (DUF465) 7 50 5.7E-15 T 28-03-2018 IPR007420 Protein of unknown function DUF465 CJD35_RS02555 ef7404e976df15ed4db387e0d71e7a18 160 Pfam PF11026 Protein of unknown function (DUF2721) 17 141 1.1E-30 T 28-03-2018 IPR021279 Protein of unknown function DUF2721 CJD35_RS19490 023051ebe40220452c2d8e92d68ddead 404 Pfam PF00872 Transposase, Mutator family 7 371 3.9E-132 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 CJD35_RS07085 5fc7179fef3373285adf4dce3935b391 311 Pfam PF06166 Protein of unknown function (DUF979) 6 310 2.9E-113 T 28-03-2018 IPR009323 Protein of unknown function DUF979 CJD35_RS11060 2c64aae585974930258108a53dc7cdd6 154 Pfam PF01478 Type IV leader peptidase family 13 116 1.2E-14 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CJD35_RS09675 21d680382b761c1b5299544792162bca 62 Pfam PF10055 Uncharacterized small protein (DUF2292) 25 60 6.5E-16 T 28-03-2018 IPR018743 Protein of unknown function DUF2292 CJD35_RS00100 086e99b2089cac4add2e30ff68e7fa55 159 Pfam PF07323 Protein of unknown function (DUF1465) 9 159 6.0E-43 T 28-03-2018 IPR010848 Protein of unknown function DUF1465 CJD35_RS07545 1d20d07783630f2d8bfe40cb406da808 96 Pfam PF02325 YGGT family 11 87 2.1E-16 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 CJD35_RS16040 6b3b412cb736958448bd0b4cc6b3e751 387 Pfam PF06224 Winged helix DNA-binding domain 38 377 6.1E-83 T 28-03-2018 IPR009351 Protein of unknown function DUF1006 CJD35_RS03325 76c4e692d24acbeae4b275538d7c0a1c 703 Pfam PF02026 RyR domain 501 565 4.3E-11 T 28-03-2018 IPR003032 Ryanodine receptor Ryr Reactome: R-HSA-2672351|Reactome: R-HSA-5578775 CJD35_RS05545 e6296fcb64ad9e7c3bd4a2003c74acac 72 Pfam PF12728 Helix-turn-helix domain 14 60 2.7E-7 T 28-03-2018 CJD35_RS20005 f16b4849c7bab45c91839e5d606aaad7 183 Pfam PF05284 Protein of unknown function (DUF736) 2 104 3.4E-22 T 28-03-2018 IPR007948 Protein of unknown function DUF736 CJD35_RS19020 9fe1bd07e4976d355ff9a649b0d2a441 152 Pfam PF05284 Protein of unknown function (DUF736) 2 104 1.3E-22 T 28-03-2018 IPR007948 Protein of unknown function DUF736 CJD35_RS04095 6de481cace74756049819cc176085102 157 Gene3D G3DSA:3.30.530.20 46 155 5.7E-4 T 28-03-2018 IPR023393 START-like domain