SMM_RS04875 857746d6412ea79593655091b853bdee 315 PANTHER PTHR22912 1 315 3.8E-117 T 22-04-2016 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PANTHER PTHR22912:SF48 1 315 3.8E-117 T 22-04-2016 SMM_RS04875 857746d6412ea79593655091b853bdee 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 300 9.0E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 133 145 1.7E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 240 261 1.7E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 111 119 1.7E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 274 292 1.7E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 200 216 1.7E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 43 58 1.7E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 63 73 1.7E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 148 172 1.7E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 1.7E-62 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 9 311 7.8E-107 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 SMM_RS04875 857746d6412ea79593655091b853bdee 315 Gene3D G3DSA:3.50.50.60 6 114 1.1E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.2E-35 T 22-04-2016 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 1.2E-35 T 22-04-2016 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 110 128 1.2E-35 T 22-04-2016 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 286 1.2E-35 T 22-04-2016 SMM_RS04875 857746d6412ea79593655091b853bdee 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.2E-35 T 22-04-2016 SMM_RS04875 857746d6412ea79593655091b853bdee 315 Gene3D G3DSA:3.50.50.60 115 305 5.2E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMM_RS04875 857746d6412ea79593655091b853bdee 315 SUPERFAMILY SSF51905 5 311 1.3E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMM_RS01285 bbb3b6873a96a0dc7fcbe667569f6395 264 Gene3D G3DSA:4.10.960.10 81 153 7.0E-29 T 22-04-2016 SMM_RS01285 bbb3b6873a96a0dc7fcbe667569f6395 264 Gene3D G3DSA:2.40.30.10 154 207 9.7E-15 T 22-04-2016 SMM_RS01285 bbb3b6873a96a0dc7fcbe667569f6395 264 Gene3D G3DSA:2.40.30.10 3 32 9.7E-15 T 22-04-2016 SMM_RS01285 bbb3b6873a96a0dc7fcbe667569f6395 264 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 203 37.074 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01285 bbb3b6873a96a0dc7fcbe667569f6395 264 SUPERFAMILY SSF50447 1 208 3.18E-77 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMM_RS01285 bbb3b6873a96a0dc7fcbe667569f6395 264 ProSitePatterns PS00474 Ribosomal protein L3 signature. 99 122 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site SMM_RS01285 bbb3b6873a96a0dc7fcbe667569f6395 264 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 200 2.5E-80 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01285 bbb3b6873a96a0dc7fcbe667569f6395 264 PANTHER PTHR11229 1 204 9.1E-92 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01285 bbb3b6873a96a0dc7fcbe667569f6395 264 Pfam PF00297 Ribosomal protein L3 96 179 1.6E-15 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS05160 a7978305e3150b24c574e7d6d9224ec5 97 SUPERFAMILY SSF141000 3 95 1.01E-19 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMM_RS05160 a7978305e3150b24c574e7d6d9224ec5 97 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 3.3E-16 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMM_RS05160 a7978305e3150b24c574e7d6d9224ec5 97 PANTHER PTHR15004 1 91 3.3E-12 T 22-04-2016 SMM_RS05160 a7978305e3150b24c574e7d6d9224ec5 97 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 97 17.397 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMM_RS05160 a7978305e3150b24c574e7d6d9224ec5 97 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 8.1E-18 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SMM_RS05160 a7978305e3150b24c574e7d6d9224ec5 97 PANTHER PTHR15004:SF0 1 91 3.3E-12 T 22-04-2016 SMM_RS00620 824aeba230dd7007a335ea982d0196d7 322 Gene3D G3DSA:3.40.50.300 2 117 2.0E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00620 824aeba230dd7007a335ea982d0196d7 322 Gene3D G3DSA:1.20.272.20 207 302 3.5E-6 T 22-04-2016 SMM_RS00620 824aeba230dd7007a335ea982d0196d7 322 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 2 301 5.6E-46 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 SMM_RS00620 824aeba230dd7007a335ea982d0196d7 322 PANTHER PTHR34388 1 303 5.6E-35 T 22-04-2016 SMM_RS00620 824aeba230dd7007a335ea982d0196d7 322 SUPERFAMILY SSF52540 2 193 1.3E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00620 824aeba230dd7007a335ea982d0196d7 322 Gene3D G3DSA:1.10.8.60 134 206 1.1E-8 T 22-04-2016 SMM_RS00620 824aeba230dd7007a335ea982d0196d7 322 Pfam PF06144 DNA polymerase III, delta subunit 3 178 5.0E-28 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SMM_RS00620 824aeba230dd7007a335ea982d0196d7 322 SUPERFAMILY SSF48019 199 302 1.7E-12 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SMM_RS03535 54e8e7592a22feb82ceed04ef23d46fa 88 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 9 87 3.0E-23 T 22-04-2016 SMM_RS03535 54e8e7592a22feb82ceed04ef23d46fa 88 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 2 88 20.347 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMM_RS03535 54e8e7592a22feb82ceed04ef23d46fa 88 Gene3D G3DSA:1.10.287.10 2 88 2.9E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SMM_RS03535 54e8e7592a22feb82ceed04ef23d46fa 88 SUPERFAMILY SSF47060 1 88 2.06E-32 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SMM_RS03535 54e8e7592a22feb82ceed04ef23d46fa 88 PANTHER PTHR23321 2 87 1.5E-34 T 22-04-2016 SMM_RS03535 54e8e7592a22feb82ceed04ef23d46fa 88 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 88 3.9E-33 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMM_RS03535 54e8e7592a22feb82ceed04ef23d46fa 88 SMART SM01387 7 87 1.0E-41 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS03535 54e8e7592a22feb82ceed04ef23d46fa 88 Pfam PF00312 Ribosomal protein S15 7 87 3.2E-32 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 35.355 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 Gene3D G3DSA:3.40.50.720 140 264 1.2E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 Gene3D G3DSA:3.40.192.10 7 139 2.2E-44 T 22-04-2016 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 SUPERFAMILY SSF51735 128 280 1.99E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 4.2E-72 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 4.2E-72 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 4.2E-72 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 4.2E-72 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 4.2E-72 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 4.2E-72 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 4.2E-72 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 128 280 1.6E-63 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 3.2E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 PANTHER PTHR10025 4 280 1.6E-126 T 22-04-2016 SMM_RS03610 a554085fad555b042dd8b7dc8876af69 284 SUPERFAMILY SSF53223 4 122 1.34E-38 T 22-04-2016 SMM_RS03255 7f13c241a6c25bebcfc8eb2dcadd60f7 176 SUPERFAMILY SSF54364 13 85 5.23E-26 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMM_RS03255 7f13c241a6c25bebcfc8eb2dcadd60f7 176 ProSitePatterns PS00938 Initiation factor 3 signature. 65 78 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SMM_RS03255 7f13c241a6c25bebcfc8eb2dcadd60f7 176 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 175 2.5E-30 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMM_RS03255 7f13c241a6c25bebcfc8eb2dcadd60f7 176 Gene3D G3DSA:3.10.20.80 13 85 7.2E-30 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMM_RS03255 7f13c241a6c25bebcfc8eb2dcadd60f7 176 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 14 176 7.3E-58 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMM_RS03255 7f13c241a6c25bebcfc8eb2dcadd60f7 176 SUPERFAMILY SSF55200 89 176 8.5E-28 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMM_RS03255 7f13c241a6c25bebcfc8eb2dcadd60f7 176 PANTHER PTHR10938 13 176 1.5E-54 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMM_RS03255 7f13c241a6c25bebcfc8eb2dcadd60f7 176 Gene3D G3DSA:3.30.110.10 87 176 1.9E-29 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SMM_RS03255 7f13c241a6c25bebcfc8eb2dcadd60f7 176 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 8 176 26.163 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SMM_RS03255 7f13c241a6c25bebcfc8eb2dcadd60f7 176 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 14 82 8.2E-29 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 PANTHER PTHR10169:SF48 1 777 0.0 T 22-04-2016 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Gene3D G3DSA:3.90.199.10 337 402 1.5E-119 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Gene3D G3DSA:3.90.199.10 35 240 1.5E-119 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 PANTHER PTHR10169 1 777 0.0 T 22-04-2016 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 SUPERFAMILY SSF101904 503 809 1.06E-85 T 22-04-2016 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 13 808 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Gene3D G3DSA:3.30.1360.40 241 336 4.2E-36 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 813 26.819 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 37 475 2.9E-157 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 SMART SM00434 16 468 6.4E-259 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Gene3D G3DSA:2.120.10.90 501 806 5.1E-95 T 22-04-2016 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 662 704 2.4E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 763 804 6.7E-12 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 614 658 8.8E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 713 756 5.7E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 509 554 5.7E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 557 591 6.3E-7 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SMM_RS00020 ae4131d20082e98a6b62b3dcdd3307cb 813 SUPERFAMILY SSF56719 35 490 2.62E-172 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SMM_RS01340 898ffae17cfaa1ac113b6125fd1cfe5d 106 Gene3D G3DSA:2.30.30.30 3 93 6.7E-21 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 SMM_RS01340 898ffae17cfaa1ac113b6125fd1cfe5d 106 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 102 3.6E-27 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01340 898ffae17cfaa1ac113b6125fd1cfe5d 106 SMART SM00739 5 32 6.6E-7 T 22-04-2016 IPR005824 KOW SMM_RS01340 898ffae17cfaa1ac113b6125fd1cfe5d 106 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01340 898ffae17cfaa1ac113b6125fd1cfe5d 106 SUPERFAMILY SSF50104 2 101 1.84E-27 T 22-04-2016 IPR008991 Translation protein SH3-like domain SMM_RS01340 898ffae17cfaa1ac113b6125fd1cfe5d 106 PANTHER PTHR12903 3 101 3.9E-31 T 22-04-2016 SMM_RS01340 898ffae17cfaa1ac113b6125fd1cfe5d 106 Pfam PF00467 KOW motif 8 39 5.5E-11 T 22-04-2016 IPR005824 KOW SMM_RS01340 898ffae17cfaa1ac113b6125fd1cfe5d 106 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 44 103 9.7E-20 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01340 898ffae17cfaa1ac113b6125fd1cfe5d 106 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 99 15.544 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS02255 68a1673b5c0bbf145808688a23c652b7 183 Pfam PF01965 DJ-1/PfpI family 2 164 9.5E-35 T 22-04-2016 IPR002818 DJ-1/PfpI SMM_RS02255 68a1673b5c0bbf145808688a23c652b7 183 Gene3D G3DSA:3.40.50.880 2 181 4.1E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMM_RS02255 68a1673b5c0bbf145808688a23c652b7 183 PANTHER PTHR11019:SF4 4 183 1.8E-44 T 22-04-2016 SMM_RS02255 68a1673b5c0bbf145808688a23c652b7 183 SUPERFAMILY SSF52317 2 181 3.44E-41 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like SMM_RS02255 68a1673b5c0bbf145808688a23c652b7 183 PANTHER PTHR11019 4 183 1.8E-44 T 22-04-2016 SMM_RS02255 68a1673b5c0bbf145808688a23c652b7 183 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 175 6.1E-45 T 22-04-2016 IPR006287 DJ-1 SMM_RS03355 769a1124732c3cd995fb025085794573 305 SMART SM00363 12 73 1.3E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMM_RS03355 769a1124732c3cd995fb025085794573 305 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 137 151 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMM_RS03355 769a1124732c3cd995fb025085794573 305 Gene3D G3DSA:3.10.290.10 11 64 2.3E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMM_RS03355 769a1124732c3cd995fb025085794573 305 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 304 4.4E-87 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMM_RS03355 769a1124732c3cd995fb025085794573 305 PANTHER PTHR11079:SF73 5 304 1.5E-99 T 22-04-2016 SMM_RS03355 769a1124732c3cd995fb025085794573 305 PANTHER PTHR11079 5 304 1.5E-99 T 22-04-2016 SMM_RS03355 769a1124732c3cd995fb025085794573 305 SUPERFAMILY SSF55120 78 301 7.2E-70 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMM_RS03355 769a1124732c3cd995fb025085794573 305 SUPERFAMILY SSF55174 10 104 1.61E-8 T 22-04-2016 SMM_RS03355 769a1124732c3cd995fb025085794573 305 Pfam PF00849 RNA pseudouridylate synthase 91 245 8.3E-34 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMM_RS02450 e80e1c0152db5a8c4a5c92921bb3a98e 73 SUPERFAMILY SSF116842 4 65 3.92E-16 T 22-04-2016 SMM_RS02450 e80e1c0152db5a8c4a5c92921bb3a98e 73 Gene3D G3DSA:1.10.287.1040 3 66 1.1E-18 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMM_RS02450 e80e1c0152db5a8c4a5c92921bb3a98e 73 PIRSF PIRSF006488 1 73 2.2E-16 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMM_RS02450 e80e1c0152db5a8c4a5c92921bb3a98e 73 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 6 61 1.1E-16 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMM_RS02450 e80e1c0152db5a8c4a5c92921bb3a98e 73 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 46 2.0E-5 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMM_RS02450 e80e1c0152db5a8c4a5c92921bb3a98e 73 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 6 66 12.536 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMM_RS02450 e80e1c0152db5a8c4a5c92921bb3a98e 73 Pfam PF02609 Exonuclease VII small subunit 7 58 2.1E-14 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SMM_RS01485 8395314a9bef2d8819688dcc2aa35dbe 279 PANTHER PTHR30514 1 266 1.4E-43 T 22-04-2016 SMM_RS01485 8395314a9bef2d8819688dcc2aa35dbe 279 SUPERFAMILY SSF46689 8 80 1.33E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMM_RS01485 8395314a9bef2d8819688dcc2aa35dbe 279 Gene3D G3DSA:3.40.50.10490 71 222 3.0E-29 T 22-04-2016 SMM_RS01485 8395314a9bef2d8819688dcc2aa35dbe 279 SUPERFAMILY SSF53697 94 232 4.03E-27 T 22-04-2016 SMM_RS01485 8395314a9bef2d8819688dcc2aa35dbe 279 Gene3D G3DSA:1.10.10.10 7 70 3.0E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMM_RS01485 8395314a9bef2d8819688dcc2aa35dbe 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 79 2.1E-14 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 SMM_RS01485 8395314a9bef2d8819688dcc2aa35dbe 279 PANTHER PTHR30514:SF1 1 266 1.4E-43 T 22-04-2016 SMM_RS01485 8395314a9bef2d8819688dcc2aa35dbe 279 Pfam PF01380 SIS domain 123 229 8.3E-19 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SMM_RS00365 803ed886a2af04d349761921898b8087 59 Gene3D G3DSA:3.90.1150.10 14 58 3.6E-4 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMM_RS03625 1a1d532fb5eef56a70b7b15d89b2cc7b 113 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 14 95 2.0E-12 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMM_RS03625 1a1d532fb5eef56a70b7b15d89b2cc7b 113 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 2 112 15.48 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMM_RS03625 1a1d532fb5eef56a70b7b15d89b2cc7b 113 SUPERFAMILY SSF89919 2 111 4.19E-27 T 22-04-2016 IPR023799 Ribosome-binding factor A domain SMM_RS03625 1a1d532fb5eef56a70b7b15d89b2cc7b 113 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 112 5.1E-22 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMM_RS03625 1a1d532fb5eef56a70b7b15d89b2cc7b 113 PANTHER PTHR33515 1 113 1.3E-22 T 22-04-2016 SMM_RS03625 1a1d532fb5eef56a70b7b15d89b2cc7b 113 ProSitePatterns PS01319 Ribosome-binding factor A signature. 74 95 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 SMM_RS03625 1a1d532fb5eef56a70b7b15d89b2cc7b 113 Gene3D G3DSA:3.30.300.20 4 112 4.6E-31 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta SMM_RS03625 1a1d532fb5eef56a70b7b15d89b2cc7b 113 Pfam PF02033 Ribosome-binding factor A 8 108 5.8E-26 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SMM_RS01050 0b654ecff81bc6efc946577e683611a3 114 SUPERFAMILY SSF53613 11 114 6.29E-12 T 22-04-2016 IPR029056 Ribokinase-like SMM_RS01050 0b654ecff81bc6efc946577e683611a3 114 PANTHER PTHR10584 13 114 3.0E-16 T 22-04-2016 SMM_RS01050 0b654ecff81bc6efc946577e683611a3 114 Gene3D G3DSA:3.40.1190.20 12 113 1.7E-13 T 22-04-2016 IPR029056 Ribokinase-like SMM_RS01050 0b654ecff81bc6efc946577e683611a3 114 Pfam PF00294 pfkB family carbohydrate kinase 28 112 6.6E-9 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB SMM_RS01050 0b654ecff81bc6efc946577e683611a3 114 PANTHER PTHR10584:SF203 13 114 3.0E-16 T 22-04-2016 SMM_RS00540 a17e2276a473096228230b9b32329951 106 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 4 101 6.2E-26 T 22-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like SMM_RS00540 a17e2276a473096228230b9b32329951 106 Gene3D G3DSA:1.10.10.10 2 92 3.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMM_RS00540 a17e2276a473096228230b9b32329951 106 Hamap MF_00245 UPF0122 protein . 4 104 16.242 T 22-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like SMM_RS00540 a17e2276a473096228230b9b32329951 106 SUPERFAMILY SSF88659 3 102 3.55E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SMM_RS00540 a17e2276a473096228230b9b32329951 106 PANTHER PTHR40083 3 86 7.2E-17 T 22-04-2016 SMM_RS02405 03721061cb2d513a91c186ac97df90b3 141 PANTHER PTHR33317 1 139 1.1E-30 T 22-04-2016 SMM_RS02405 03721061cb2d513a91c186ac97df90b3 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 141 21.272 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMM_RS02405 03721061cb2d513a91c186ac97df90b3 141 SUPERFAMILY SSF53098 4 140 1.24E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMM_RS02405 03721061cb2d513a91c186ac97df90b3 141 SMART SM00732 3 106 8.6E-21 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMM_RS02405 03721061cb2d513a91c186ac97df90b3 141 Pfam PF03652 Holliday junction resolvase 5 138 2.9E-35 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMM_RS02405 03721061cb2d513a91c186ac97df90b3 141 Gene3D G3DSA:3.30.420.140 4 141 1.4E-37 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SMM_RS02405 03721061cb2d513a91c186ac97df90b3 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 137 1.3E-26 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SMM_RS05865 e3fed43bcef4cdd1e6cec7e07d6e54c6 135 PANTHER PTHR10314 3 132 1.4E-45 T 22-04-2016 SMM_RS05865 e3fed43bcef4cdd1e6cec7e07d6e54c6 135 Gene3D G3DSA:3.40.50.1100 17 133 2.2E-38 T 22-04-2016 SMM_RS05865 e3fed43bcef4cdd1e6cec7e07d6e54c6 135 SUPERFAMILY SSF53686 8 133 5.24E-33 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMM_RS05865 e3fed43bcef4cdd1e6cec7e07d6e54c6 135 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 133 2.0E-29 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMM_RS05865 e3fed43bcef4cdd1e6cec7e07d6e54c6 135 PANTHER PTHR10314:SF17 3 132 1.4E-45 T 22-04-2016 SMM_RS02620 58c6ace59d8d09c02d1236bbe8fa474f 86 Hamap MF_01103 UPF0291 protein . 2 60 13.951 T 22-04-2016 IPR009242 Protein of unknown function DUF896 SMM_RS02620 58c6ace59d8d09c02d1236bbe8fa474f 86 Gene3D G3DSA:1.10.287.540 3 60 3.1E-21 T 22-04-2016 IPR023218 UPF0291 structural domain SMM_RS02620 58c6ace59d8d09c02d1236bbe8fa474f 86 Pfam PF05979 Bacterial protein of unknown function (DUF896) 6 68 6.8E-26 T 22-04-2016 IPR009242 Protein of unknown function DUF896 SMM_RS02620 58c6ace59d8d09c02d1236bbe8fa474f 86 PANTHER PTHR37300:SF1 2 79 3.3E-25 T 22-04-2016 SMM_RS02620 58c6ace59d8d09c02d1236bbe8fa474f 86 SUPERFAMILY SSF158221 1 42 1.96E-11 T 22-04-2016 SMM_RS02620 58c6ace59d8d09c02d1236bbe8fa474f 86 PANTHER PTHR37300 2 79 3.3E-25 T 22-04-2016 SMM_RS01330 eacc8d27f73c6c471e91de5d3336a2b9 85 PANTHER PTHR10744 6 83 9.9E-37 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01330 eacc8d27f73c6c471e91de5d3336a2b9 85 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.9E-34 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01330 eacc8d27f73c6c471e91de5d3336a2b9 85 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01330 eacc8d27f73c6c471e91de5d3336a2b9 85 Gene3D G3DSA:2.40.50.140 6 83 2.5E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMM_RS01330 eacc8d27f73c6c471e91de5d3336a2b9 85 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 7.1E-12 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01330 eacc8d27f73c6c471e91de5d3336a2b9 85 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 7.1E-12 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01330 eacc8d27f73c6c471e91de5d3336a2b9 85 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 7.1E-12 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01330 eacc8d27f73c6c471e91de5d3336a2b9 85 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 4 82 23.805 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01330 eacc8d27f73c6c471e91de5d3336a2b9 85 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 77 2.0E-31 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01330 eacc8d27f73c6c471e91de5d3336a2b9 85 SUPERFAMILY SSF50249 6 83 4.71E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMM_RS01330 eacc8d27f73c6c471e91de5d3336a2b9 85 Pfam PF00366 Ribosomal protein S17 11 77 4.1E-30 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 PANTHER PTHR23115:SF184 103 443 6.2E-180 T 22-04-2016 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 PANTHER PTHR23115:SF184 461 615 6.2E-180 T 22-04-2016 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 42 89 3.0E-10 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 Pfam PF00009 Elongation factor Tu GTP binding domain 122 280 1.6E-35 T 22-04-2016 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 SUPERFAMILY SSF50447 292 374 9.34E-21 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 2 617 15.58 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 PANTHER PTHR23115 103 443 6.2E-180 T 22-04-2016 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 PANTHER PTHR23115 461 615 6.2E-180 T 22-04-2016 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 SUPERFAMILY SSF50447 521 615 8.11E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 Pfam PF11987 Translation-initiation factor 2 405 509 5.0E-35 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 Gene3D G3DSA:3.40.50.10050 420 498 2.9E-23 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 Gene3D G3DSA:3.40.50.300 114 278 1.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 PRINTS PR00315 GTP-binding elongation factor signature 223 232 9.6E-5 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 PRINTS PR00315 GTP-binding elongation factor signature 122 135 9.6E-5 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 Gene3D G3DSA:2.40.30.10 521 616 3.4E-35 T 22-04-2016 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 Gene3D G3DSA:2.40.30.10 291 383 2.0E-18 T 22-04-2016 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 35 616 1.7E-241 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 SUPERFAMILY SSF52156 397 526 2.22E-35 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 SUPERFAMILY SSF52540 107 292 4.64E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS04630 2b7816b2c1d858784ab355b6917f6b3f 617 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 122 278 8.9E-33 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SMM_RS04585 1b64d0221551a6700d3673e4b100f4eb 206 SUPERFAMILY SSF63999 9 118 1.7E-13 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SMM_RS04585 1b64d0221551a6700d3673e4b100f4eb 206 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 15 203 1.1E-27 T 22-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SMM_RS04585 1b64d0221551a6700d3673e4b100f4eb 206 Gene3D G3DSA:3.40.50.10240 6 118 2.7E-11 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SMM_RS04585 1b64d0221551a6700d3673e4b100f4eb 206 PANTHER PTHR41299:SF1 7 204 1.3E-16 T 22-04-2016 SMM_RS04585 1b64d0221551a6700d3673e4b100f4eb 206 PANTHER PTHR41299 7 204 1.3E-16 T 22-04-2016 SMM_RS04585 1b64d0221551a6700d3673e4b100f4eb 206 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 26 118 9.1E-8 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SMM_RS04585 1b64d0221551a6700d3673e4b100f4eb 206 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 145 198 6.7E-8 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SMM_RS04585 1b64d0221551a6700d3673e4b100f4eb 206 SMART SM00983 136 201 4.4E-8 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SMM_RS04585 1b64d0221551a6700d3673e4b100f4eb 206 Gene3D G3DSA:2.60.120.320 119 202 2.1E-4 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SMM_RS00055 63cec4030ec4f9be4fcf32a72b6180b5 240 PANTHER PTHR18895 4 235 1.3E-66 T 22-04-2016 SMM_RS00055 63cec4030ec4f9be4fcf32a72b6180b5 240 SUPERFAMILY SSF53335 8 195 1.14E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMM_RS00055 63cec4030ec4f9be4fcf32a72b6180b5 240 Gene3D G3DSA:3.40.50.150 27 239 7.2E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMM_RS00055 63cec4030ec4f9be4fcf32a72b6180b5 240 Pfam PF05175 Methyltransferase small domain 30 139 7.9E-11 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SMM_RS00055 63cec4030ec4f9be4fcf32a72b6180b5 240 PANTHER PTHR18895:SF75 4 235 1.3E-66 T 22-04-2016 SMM_RS00055 63cec4030ec4f9be4fcf32a72b6180b5 240 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SMM_RS00855 5c315acb2eb20bcb9f2087fa829b0f41 263 Gene3D G3DSA:3.40.50.10330 16 116 5.7E-18 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMM_RS00855 5c315acb2eb20bcb9f2087fa829b0f41 263 SUPERFAMILY SSF111331 19 245 8.76E-39 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SMM_RS00855 5c315acb2eb20bcb9f2087fa829b0f41 263 Pfam PF01513 ATP-NAD kinase 38 170 3.4E-15 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMM_RS00855 5c315acb2eb20bcb9f2087fa829b0f41 263 PANTHER PTHR20275 6 169 1.6E-26 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMM_RS00855 5c315acb2eb20bcb9f2087fa829b0f41 263 Gene3D G3DSA:2.60.200.30 117 222 1.2E-17 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 SUPERFAMILY SSF56053 1 82 9.28E-21 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 PIRSF PIRSF002162 1 177 2.5E-48 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 PANTHER PTHR11655:SF14 1 179 1.5E-76 T 22-04-2016 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 Gene3D G3DSA:3.90.930.12 2 82 5.9E-23 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 35.591 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 PRINTS PR00059 Ribosomal protein L6 signature 141 162 4.5E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 PRINTS PR00059 Ribosomal protein L6 signature 71 96 4.5E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 PRINTS PR00059 Ribosomal protein L6 signature 99 115 4.5E-32 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 Gene3D G3DSA:3.90.930.12 83 176 1.2E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 Pfam PF00347 Ribosomal protein L6 11 82 1.2E-13 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 Pfam PF00347 Ribosomal protein L6 91 164 1.2E-20 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 SUPERFAMILY SSF56053 83 176 9.54E-38 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 PANTHER PTHR11655 1 179 1.5E-76 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS01360 5d5e8bbb66b74c9a8f151fbe95529bb6 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.1E-70 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SMM_RS06190 15939d4d2f82bff41b10294695ab7007 82 Gene3D G3DSA:3.30.230.30 3 79 1.9E-23 T 22-04-2016 IPR001498 Impact, N-terminal SMM_RS06190 15939d4d2f82bff41b10294695ab7007 82 PANTHER PTHR16301 2 78 1.4E-17 T 22-04-2016 IPR023582 Impact family SMM_RS06190 15939d4d2f82bff41b10294695ab7007 82 SUPERFAMILY SSF54211 3 79 1.21E-20 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMM_RS06190 15939d4d2f82bff41b10294695ab7007 82 PANTHER PTHR16301:SF0 2 78 1.4E-17 T 22-04-2016 SMM_RS06190 15939d4d2f82bff41b10294695ab7007 82 Pfam PF01205 Uncharacterized protein family UPF0029 4 79 6.6E-15 T 22-04-2016 IPR001498 Impact, N-terminal SMM_RS05175 9040981dd9d33c7a04dcab4411156214 159 PANTHER PTHR30175 9 108 2.2E-38 T 22-04-2016 SMM_RS05175 9040981dd9d33c7a04dcab4411156214 159 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 12 133 3.9E-49 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMM_RS05175 9040981dd9d33c7a04dcab4411156214 159 Gene3D G3DSA:2.70.70.10 6 158 6.6E-57 T 22-04-2016 SMM_RS05175 9040981dd9d33c7a04dcab4411156214 159 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 13 132 3.2E-44 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMM_RS05175 9040981dd9d33c7a04dcab4411156214 159 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 75 87 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMM_RS05175 9040981dd9d33c7a04dcab4411156214 159 SUPERFAMILY SSF51261 5 156 1.74E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif SMM_RS05175 9040981dd9d33c7a04dcab4411156214 159 PANTHER PTHR30175:SF5 9 108 2.2E-38 T 22-04-2016 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 185 205 4.7E-28 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 130 149 4.7E-28 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 298 324 4.7E-28 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 47 65 4.7E-28 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 67 90 4.7E-28 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 Gene3D G3DSA:3.30.420.40 261 315 7.7E-26 T 22-04-2016 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 Gene3D G3DSA:3.30.420.40 158 184 7.7E-26 T 22-04-2016 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 Gene3D G3DSA:3.90.640.10 185 255 1.0E-23 T 22-04-2016 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 PANTHER PTHR19375 11 323 3.4E-90 T 22-04-2016 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 Pfam PF06723 MreB/Mbl protein 11 332 7.3E-129 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 SUPERFAMILY SSF53067 148 325 1.7E-38 T 22-04-2016 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 PANTHER PTHR19375:SF117 11 323 3.4E-90 T 22-04-2016 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 Gene3D G3DSA:3.30.420.40 11 157 1.7E-27 T 22-04-2016 SMM_RS02105 2800096540cda695ec228ad2e0aef2b1 346 SUPERFAMILY SSF53067 11 146 2.13E-26 T 22-04-2016 SMM_RS01370 c8fe424b7676b893da2fa33eec17353f 157 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 154 33.528 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMM_RS01370 c8fe424b7676b893da2fa33eec17353f 157 PANTHER PTHR13718 2 155 1.1E-69 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 SMM_RS01370 c8fe424b7676b893da2fa33eec17353f 157 Pfam PF00333 Ribosomal protein S5, N-terminal domain 2 66 9.0E-30 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SMM_RS01370 c8fe424b7676b893da2fa33eec17353f 157 ProSitePatterns PS00585 Ribosomal protein S5 signature. 19 51 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site SMM_RS01370 c8fe424b7676b893da2fa33eec17353f 157 Gene3D G3DSA:3.30.230.10 67 150 2.1E-31 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMM_RS01370 c8fe424b7676b893da2fa33eec17353f 157 SUPERFAMILY SSF54768 2 67 1.99E-22 T 22-04-2016 SMM_RS01370 c8fe424b7676b893da2fa33eec17353f 157 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 2 151 6.6E-67 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SMM_RS01370 c8fe424b7676b893da2fa33eec17353f 157 Pfam PF03719 Ribosomal protein S5, C-terminal domain 78 148 4.4E-29 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SMM_RS01370 c8fe424b7676b893da2fa33eec17353f 157 Gene3D G3DSA:3.30.160.20 2 64 3.3E-29 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SMM_RS01370 c8fe424b7676b893da2fa33eec17353f 157 SUPERFAMILY SSF54211 71 150 2.78E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMM_RS04885 6c3f7b6ea596d654ebb24339ed75bae0 308 PANTHER PTHR30305 1 308 1.5E-70 T 22-04-2016 SMM_RS04885 6c3f7b6ea596d654ebb24339ed75bae0 308 Pfam PF02603 HPr Serine kinase N terminus 6 128 5.3E-26 T 22-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SMM_RS04885 6c3f7b6ea596d654ebb24339ed75bae0 308 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 5 305 6.5E-90 T 22-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SMM_RS04885 6c3f7b6ea596d654ebb24339ed75bae0 308 PANTHER PTHR30305:SF1 1 308 1.5E-70 T 22-04-2016 SMM_RS04885 6c3f7b6ea596d654ebb24339ed75bae0 308 Gene3D G3DSA:3.40.1390.20 1 134 2.3E-29 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SMM_RS04885 6c3f7b6ea596d654ebb24339ed75bae0 308 Gene3D G3DSA:3.40.50.300 137 307 1.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS04885 6c3f7b6ea596d654ebb24339ed75bae0 308 SUPERFAMILY SSF75138 1 132 1.18E-22 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SMM_RS04885 6c3f7b6ea596d654ebb24339ed75bae0 308 SUPERFAMILY SSF53795 139 301 5.49E-30 T 22-04-2016 SMM_RS04885 6c3f7b6ea596d654ebb24339ed75bae0 308 Pfam PF07475 HPr Serine kinase C-terminal domain 133 301 3.5E-54 T 22-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SMM_RS05405 ecaf7e8143bcef171dbf643d00ee897e 133 ProSitePatterns PS00360 Ribosomal protein S9 signature. 72 90 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SMM_RS05405 ecaf7e8143bcef171dbf643d00ee897e 133 Pfam PF00380 Ribosomal protein S9/S16 13 133 1.4E-44 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SMM_RS05405 ecaf7e8143bcef171dbf643d00ee897e 133 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 4 133 32.303 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid SMM_RS05405 ecaf7e8143bcef171dbf643d00ee897e 133 PANTHER PTHR21569 9 133 5.0E-60 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SMM_RS05405 ecaf7e8143bcef171dbf643d00ee897e 133 Gene3D G3DSA:3.30.230.10 9 133 1.8E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMM_RS05405 ecaf7e8143bcef171dbf643d00ee897e 133 SUPERFAMILY SSF54211 9 133 2.31E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 PANTHER PTHR24220:SF239 10 389 1.6E-170 T 22-04-2016 SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 ProSitePatterns PS00211 ABC transporters family signature. 410 424 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 PANTHER PTHR24220 10 389 1.6E-170 T 22-04-2016 SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 SUPERFAMILY SSF52540 7 232 7.17E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 SUPERFAMILY SSF52540 249 489 7.83E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 Gene3D G3DSA:3.40.50.300 259 503 4.8E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 Gene3D G3DSA:3.40.50.300 5 240 2.5E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 Pfam PF00005 ABC transporter 25 174 3.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 Pfam PF00005 ABC transporter 280 437 3.1E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 SMART SM00382 33 230 1.4E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain SMM_RS00270 62f90ce56b390eadb96c66eec9367d49 523 SMART SM00382 289 486 18.0 T 22-04-2016 IPR003593 AAA+ ATPase domain SMM_RS05745 0cd2d19c8425f6991132352b9b8e8c9a 105 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 99 4.0E-18 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SMM_RS05745 0cd2d19c8425f6991132352b9b8e8c9a 105 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 105 14.592 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SMM_RS05745 0cd2d19c8425f6991132352b9b8e8c9a 105 Gene3D G3DSA:3.30.230.10 2 99 9.2E-23 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SMM_RS05745 0cd2d19c8425f6991132352b9b8e8c9a 105 SUPERFAMILY SSF54211 2 102 7.84E-24 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMM_RS05745 0cd2d19c8425f6991132352b9b8e8c9a 105 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 50 64 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 SMM_RS05745 0cd2d19c8425f6991132352b9b8e8c9a 105 PANTHER PTHR33992 1 94 8.8E-18 T 22-04-2016 SMM_RS05745 0cd2d19c8425f6991132352b9b8e8c9a 105 Pfam PF00825 Ribonuclease P 2 99 6.7E-23 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SMM_RS05745 0cd2d19c8425f6991132352b9b8e8c9a 105 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 101 8.7E-22 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 SUPERFAMILY SSF53092 15 137 7.67E-20 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 317 329 5.0E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 219 235 5.0E-5 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 PANTHER PTHR10804 122 365 1.6E-92 T 22-04-2016 SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 PANTHER PTHR10804 1 11 1.6E-92 T 22-04-2016 SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 PANTHER PTHR10804:SF110 122 365 1.6E-92 T 22-04-2016 SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 PANTHER PTHR10804:SF110 1 11 1.6E-92 T 22-04-2016 SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 Pfam PF01321 Creatinase/Prolidase N-terminal domain 15 132 6.2E-13 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 Pfam PF00557 Metallopeptidase family M24 147 349 2.2E-70 T 22-04-2016 IPR000994 Peptidase M24, structural domain SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 Gene3D G3DSA:3.90.230.10 139 363 6.7E-88 T 22-04-2016 IPR000994 Peptidase M24, structural domain SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 SUPERFAMILY SSF55920 139 365 1.05E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 295 307 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SMM_RS02465 f1ebffbbcfe1662782db418719672c1b 365 Gene3D G3DSA:3.40.350.10 13 132 2.5E-19 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SMM_RS05310 caa298b00b42f82456633d6ae76fdcdd 181 PANTHER PTHR23407 1 180 2.1E-34 T 22-04-2016 SMM_RS05310 caa298b00b42f82456633d6ae76fdcdd 181 SUPERFAMILY SSF100950 4 180 5.44E-44 T 22-04-2016 SMM_RS05310 caa298b00b42f82456633d6ae76fdcdd 181 PIRSF PIRSF006806 1 181 1.4E-40 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMM_RS05310 caa298b00b42f82456633d6ae76fdcdd 181 Gene3D G3DSA:3.40.50.10420 5 180 3.0E-42 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SMM_RS05310 caa298b00b42f82456633d6ae76fdcdd 181 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 180 6.3E-35 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMM_RS05310 caa298b00b42f82456633d6ae76fdcdd 181 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 180 6.9E-43 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMM_RS05310 caa298b00b42f82456633d6ae76fdcdd 181 PANTHER PTHR23407:SF1 1 180 2.1E-34 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SMM_RS04760 d4f3852fc3f16d47f5032d92d3469381 164 PANTHER PTHR33692 1 161 5.1E-15 T 22-04-2016 SMM_RS04760 d4f3852fc3f16d47f5032d92d3469381 164 SUPERFAMILY SSF50346 99 161 2.2E-8 T 22-04-2016 IPR011033 PRC-barrel-like SMM_RS04760 d4f3852fc3f16d47f5032d92d3469381 164 Gene3D G3DSA:2.40.30.60 2 91 2.9E-9 T 22-04-2016 IPR002676 RimM protein GO:0006364 SMM_RS04760 d4f3852fc3f16d47f5032d92d3469381 164 Pfam PF01782 RimM N-terminal domain 9 88 3.6E-9 T 22-04-2016 IPR002676 RimM protein GO:0006364 SMM_RS04760 d4f3852fc3f16d47f5032d92d3469381 164 SUPERFAMILY SSF50447 9 91 6.71E-9 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain SMM_RS04760 d4f3852fc3f16d47f5032d92d3469381 164 Gene3D G3DSA:2.30.30.240 99 161 4.7E-10 T 22-04-2016 SMM_RS04760 d4f3852fc3f16d47f5032d92d3469381 164 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 164 12.896 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SMM_RS04760 d4f3852fc3f16d47f5032d92d3469381 164 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 7 162 1.2E-22 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SMM_RS06020 d44255d0a7d1eb122f2f150402fe91e7 68 PANTHER PTHR24220 7 55 1.5E-17 T 22-04-2016 SMM_RS06020 d44255d0a7d1eb122f2f150402fe91e7 68 Pfam PF00005 ABC transporter 22 54 1.4E-6 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMM_RS06020 d44255d0a7d1eb122f2f150402fe91e7 68 Gene3D G3DSA:3.40.50.300 2 54 6.0E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS06020 d44255d0a7d1eb122f2f150402fe91e7 68 SUPERFAMILY SSF52540 8 55 1.38E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS06020 d44255d0a7d1eb122f2f150402fe91e7 68 PANTHER PTHR24220:SF523 7 55 1.5E-17 T 22-04-2016 SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 PANTHER PTHR15184 3 462 0.0 T 22-04-2016 SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 SUPERFAMILY SSF50615 4 76 4.19E-25 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 335 344 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 SMART SM00382 143 324 9.1E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 Gene3D G3DSA:1.10.1140.10 347 463 2.5E-49 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 7 74 8.2E-20 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 344 1.6E-67 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 Gene3D G3DSA:3.40.50.300 77 346 7.0E-114 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 Hamap MF_01347 ATP synthase subunit beta [atpB]. 2 462 57.307 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 4 462 8.7E-252 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 Gene3D G3DSA:2.40.10.170 3 76 3.1E-29 T 22-04-2016 SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 SUPERFAMILY SSF47917 347 463 1.31E-48 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 SUPERFAMILY SSF52540 78 349 3.35E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00450 4bcad0b6ff40f203d701866f7188ab0c 464 PANTHER PTHR15184:SF8 3 462 0.0 T 22-04-2016 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 SUPERFAMILY SSF47323 433 557 1.5E-29 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 Gene3D G3DSA:3.30.1360.70 8 106 3.1E-22 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 SUPERFAMILY SSF55190 6 100 1.96E-19 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 Gene3D G3DSA:3.40.50.620 113 442 1.3E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 PANTHER PTHR11956:SF6 1 557 6.6E-163 T 22-04-2016 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 PANTHER PTHR11956 1 557 6.6E-163 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 SMART SM00836 438 557 4.4E-42 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 Hamap MF_00123 Arginine--tRNA ligase [argS]. 6 557 24.135 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 Pfam PF00750 tRNA synthetases class I (R) 99 400 1.5E-27 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 SUPERFAMILY SSF52374 112 449 2.68E-79 T 22-04-2016 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 17 88 1.0E-19 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 126 135 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 Pfam PF05746 DALR anticodon binding domain 439 557 2.9E-27 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 5.0E-19 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 131 147 5.0E-19 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 116 131 5.0E-19 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 155 168 5.0E-19 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 Gene3D G3DSA:1.10.730.10 443 557 1.7E-31 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 12 557 1.2E-126 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS04125 440cbcc270e6fd80f0e3c02115aa8808 557 SMART SM01016 6 88 6.1E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SMM_RS01810 e2553410f04323b43214946af32e6f17 164 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 59 71 1.0E-8 T 22-04-2016 SMM_RS01810 e2553410f04323b43214946af32e6f17 164 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 36 55 1.0E-8 T 22-04-2016 SMM_RS01810 e2553410f04323b43214946af32e6f17 164 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 22 125 3.8E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMM_RS01810 e2553410f04323b43214946af32e6f17 164 SUPERFAMILY SSF81665 52 152 4.45E-16 T 22-04-2016 SMM_RS01810 e2553410f04323b43214946af32e6f17 164 Gene3D G3DSA:1.20.1110.10 22 149 2.9E-32 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain SMM_RS01810 e2553410f04323b43214946af32e6f17 164 PANTHER PTHR24093:SF128 22 151 2.1E-60 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 SMM_RS01810 e2553410f04323b43214946af32e6f17 164 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 67 92 4.7E-8 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMM_RS01810 e2553410f04323b43214946af32e6f17 164 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 36 52 4.7E-8 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 SMM_RS01810 e2553410f04323b43214946af32e6f17 164 PANTHER PTHR24093 22 151 2.1E-60 T 22-04-2016 SMM_RS04245 d95641a268f2a55f7ce2170d4f14de24 156 SUPERFAMILY SSF142433 2 153 3.4E-39 T 22-04-2016 IPR008136 CinA, C-terminal SMM_RS04245 d95641a268f2a55f7ce2170d4f14de24 156 Pfam PF02464 Competence-damaged protein 3 152 1.7E-38 T 22-04-2016 IPR008136 CinA, C-terminal SMM_RS04245 d95641a268f2a55f7ce2170d4f14de24 156 PANTHER PTHR13939 1 137 2.5E-34 T 22-04-2016 SMM_RS04245 d95641a268f2a55f7ce2170d4f14de24 156 Gene3D G3DSA:3.90.950.20 3 153 9.4E-41 T 22-04-2016 IPR008136 CinA, C-terminal SMM_RS04245 d95641a268f2a55f7ce2170d4f14de24 156 PANTHER PTHR13939:SF0 1 137 2.5E-34 T 22-04-2016 SMM_RS04245 d95641a268f2a55f7ce2170d4f14de24 156 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 6 145 9.1E-30 T 22-04-2016 IPR008136 CinA, C-terminal SMM_RS02960 4e6a2d15d84cb8e87efb550c0e5a638a 198 Gene3D G3DSA:3.40.50.1000 25 154 2.5E-26 T 22-04-2016 IPR023214 HAD-like domain SMM_RS02960 4e6a2d15d84cb8e87efb550c0e5a638a 198 PANTHER PTHR19288 19 194 1.4E-28 T 22-04-2016 SMM_RS02960 4e6a2d15d84cb8e87efb550c0e5a638a 198 PANTHER PTHR19288:SF25 19 194 1.4E-28 T 22-04-2016 SMM_RS02960 4e6a2d15d84cb8e87efb550c0e5a638a 198 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 18 178 7.6E-32 T 22-04-2016 IPR010021 HAD-superfamily phosphatase, YqeG-like SMM_RS02960 4e6a2d15d84cb8e87efb550c0e5a638a 198 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 42 153 1.4E-14 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SMM_RS02960 4e6a2d15d84cb8e87efb550c0e5a638a 198 Pfam PF09419 Mitochondrial PGP phosphatase 18 145 1.1E-12 T 22-04-2016 IPR027706 Mitochondrial PGP phosphatase KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SMM_RS02960 4e6a2d15d84cb8e87efb550c0e5a638a 198 SUPERFAMILY SSF56784 40 152 1.08E-19 T 22-04-2016 IPR023214 HAD-like domain SMM_RS03345 c0cbaf1a427e39fd6d7435597bec97bf 162 PANTHER PTHR11086 3 156 1.1E-65 T 22-04-2016 IPR015517 Deoxycytidylate deaminase-related SMM_RS03345 c0cbaf1a427e39fd6d7435597bec97bf 162 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 120 5.9E-23 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SMM_RS03345 c0cbaf1a427e39fd6d7435597bec97bf 162 SUPERFAMILY SSF53927 11 130 2.69E-30 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SMM_RS03345 c0cbaf1a427e39fd6d7435597bec97bf 162 PIRSF PIRSF006019 1 157 3.1E-44 T 22-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 SMM_RS03345 c0cbaf1a427e39fd6d7435597bec97bf 162 Gene3D G3DSA:3.40.140.10 9 144 8.2E-37 T 22-04-2016 SMM_RS03345 c0cbaf1a427e39fd6d7435597bec97bf 162 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 78 110 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SMM_RS01205 ad29acd251bc4df4b68588e437199ee6 288 SMART SM00382 46 231 1.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain SMM_RS01205 ad29acd251bc4df4b68588e437199ee6 288 PANTHER PTHR24220 21 246 9.3E-87 T 22-04-2016 SMM_RS01205 ad29acd251bc4df4b68588e437199ee6 288 PANTHER PTHR24220:SF435 21 246 9.3E-87 T 22-04-2016 SMM_RS01205 ad29acd251bc4df4b68588e437199ee6 288 Gene3D G3DSA:3.40.50.300 16 245 2.1E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS01205 ad29acd251bc4df4b68588e437199ee6 288 Pfam PF00005 ABC transporter 38 183 5.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMM_RS01205 ad29acd251bc4df4b68588e437199ee6 288 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMM_RS01205 ad29acd251bc4df4b68588e437199ee6 288 SUPERFAMILY SSF52540 20 245 1.22E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS01205 ad29acd251bc4df4b68588e437199ee6 288 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 21 286 7.6E-109 T 22-04-2016 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Pfam PF00013 KH domain 562 619 2.9E-7 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 695 1.0E-276 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 PANTHER PTHR11252:SF0 1 693 0.0 T 22-04-2016 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Pfam PF01138 3' exoribonuclease family, domain 1 328 461 4.4E-22 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Pfam PF01138 3' exoribonuclease family, domain 1 13 142 2.4E-19 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 SMART SM00322 557 623 2.9E-8 T 22-04-2016 IPR004087 K Homology domain GO:0003676 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 SUPERFAMILY SSF46915 239 325 3.66E-9 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 SUPERFAMILY SSF54211 302 493 2.99E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 240 325 1.2E-8 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 SMART SM00316 626 696 3.9E-20 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Gene3D G3DSA:1.10.10.400 229 315 1.7E-16 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 SUPERFAMILY SSF55666 143 234 1.02E-22 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Gene3D G3DSA:2.40.50.140 631 695 5.6E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 SUPERFAMILY SSF55666 455 552 2.88E-26 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 SUPERFAMILY SSF54791 557 635 1.14E-13 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Pfam PF00575 S1 RNA binding domain 626 693 5.4E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 699 28.238 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Gene3D G3DSA:3.30.230.70 9 223 8.3E-73 T 22-04-2016 IPR027408 PNPase/RNase PH domain SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Gene3D G3DSA:3.30.230.70 316 547 3.3E-82 T 22-04-2016 IPR027408 PNPase/RNase PH domain SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Pfam PF03725 3' exoribonuclease family, domain 2 464 534 8.3E-6 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Pfam PF03725 3' exoribonuclease family, domain 2 157 209 3.3E-9 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 PIRSF PIRSF005499 1 701 1.2E-270 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 SUPERFAMILY SSF50249 616 695 7.2E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 PANTHER PTHR11252 1 693 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 SUPERFAMILY SSF54211 10 142 2.83E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SMM_RS00740 5c6364e585c87f05c0c127304caec903 701 Gene3D G3DSA:3.30.1370.10 556 630 2.4E-18 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SMM_RS04750 db7ee0a9939448435a3fd20c9906a23b 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS04750 db7ee0a9939448435a3fd20c9906a23b 117 PRINTS PR00061 Ribosomal protein L19 signature 89 114 5.6E-38 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS04750 db7ee0a9939448435a3fd20c9906a23b 117 PRINTS PR00061 Ribosomal protein L19 signature 35 64 5.6E-38 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS04750 db7ee0a9939448435a3fd20c9906a23b 117 PRINTS PR00061 Ribosomal protein L19 signature 5 34 5.6E-38 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS04750 db7ee0a9939448435a3fd20c9906a23b 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 114 3.7E-47 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS04750 db7ee0a9939448435a3fd20c9906a23b 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 30.525 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS04750 db7ee0a9939448435a3fd20c9906a23b 117 SUPERFAMILY SSF50104 2 116 5.01E-44 T 22-04-2016 IPR008991 Translation protein SH3-like domain SMM_RS04750 db7ee0a9939448435a3fd20c9906a23b 117 PANTHER PTHR15680 7 117 1.7E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS04750 db7ee0a9939448435a3fd20c9906a23b 117 PIRSF PIRSF002191 1 117 1.9E-48 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS04750 db7ee0a9939448435a3fd20c9906a23b 117 Pfam PF01245 Ribosomal protein L19 5 113 5.1E-48 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS03095 991e9f7a663c05e1baae66c6b8dacafb 280 Gene3D G3DSA:3.40.630.30 145 264 3.3E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMM_RS03095 991e9f7a663c05e1baae66c6b8dacafb 280 Pfam PF13673 Acetyltransferase (GNAT) domain 182 262 7.3E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SMM_RS03095 991e9f7a663c05e1baae66c6b8dacafb 280 SUPERFAMILY SSF55729 144 274 3.14E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMM_RS05425 5bcfefad9509561d222e8ff71df87cbd 415 Gene3D G3DSA:3.90.1150.10 278 409 3.7E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SMM_RS05425 5bcfefad9509561d222e8ff71df87cbd 415 SUPERFAMILY SSF53383 8 409 6.69E-169 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SMM_RS05425 5bcfefad9509561d222e8ff71df87cbd 415 Pfam PF00464 Serine hydroxymethyltransferase 7 379 4.6E-166 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMM_RS05425 5bcfefad9509561d222e8ff71df87cbd 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 1 409 51.758 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMM_RS05425 5bcfefad9509561d222e8ff71df87cbd 415 Gene3D G3DSA:3.40.640.10 31 277 4.5E-104 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SMM_RS05425 5bcfefad9509561d222e8ff71df87cbd 415 PIRSF PIRSF000412 1 411 1.2E-165 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMM_RS05425 5bcfefad9509561d222e8ff71df87cbd 415 PANTHER PTHR11680 11 415 5.9E-230 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMM_RS05425 5bcfefad9509561d222e8ff71df87cbd 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 216 232 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SMM_RS02295 d4ea981dd2039cd6ce935e23fbdca85a 170 SUPERFAMILY SSF53271 2 166 3.18E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMM_RS02295 d4ea981dd2039cd6ce935e23fbdca85a 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 33.386 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SMM_RS02295 d4ea981dd2039cd6ce935e23fbdca85a 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 169 4.6E-62 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SMM_RS02295 d4ea981dd2039cd6ce935e23fbdca85a 170 Gene3D G3DSA:3.40.50.2020 2 169 6.5E-59 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMM_RS02295 d4ea981dd2039cd6ce935e23fbdca85a 170 Pfam PF00156 Phosphoribosyl transferase domain 45 148 9.0E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMM_RS02295 d4ea981dd2039cd6ce935e23fbdca85a 170 PANTHER PTHR32315 3 170 2.9E-67 T 22-04-2016 SMM_RS03505 db1b69703a4314b22355b8602e4f9d81 91 Gene3D G3DSA:3.40.50.300 20 80 2.4E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS03505 db1b69703a4314b22355b8602e4f9d81 91 Pfam PF00005 ABC transporter 40 81 1.1E-7 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMM_RS03505 db1b69703a4314b22355b8602e4f9d81 91 SUPERFAMILY SSF52540 19 81 3.85E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS01210 8f2f627462ce1155b988ad2abb6b4a13 303 SMART SM00382 49 241 6.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain SMM_RS01210 8f2f627462ce1155b988ad2abb6b4a13 303 PANTHER PTHR24220:SF66 21 277 4.1E-85 T 22-04-2016 SMM_RS01210 8f2f627462ce1155b988ad2abb6b4a13 303 PANTHER PTHR24220 21 277 4.1E-85 T 22-04-2016 SMM_RS01210 8f2f627462ce1155b988ad2abb6b4a13 303 Gene3D G3DSA:3.40.50.300 15 257 9.7E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS01210 8f2f627462ce1155b988ad2abb6b4a13 303 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMM_RS01210 8f2f627462ce1155b988ad2abb6b4a13 303 SUPERFAMILY SSF52540 36 257 9.47E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS01210 8f2f627462ce1155b988ad2abb6b4a13 303 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 20 298 2.7E-113 T 22-04-2016 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 SMM_RS01210 8f2f627462ce1155b988ad2abb6b4a13 303 Pfam PF00005 ABC transporter 40 192 8.7E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMM_RS03405 d93f955a31fa658bc3f9e96f6f0d480c 58 PANTHER PTHR21026 1 58 1.3E-17 T 22-04-2016 SMM_RS03405 d93f955a31fa658bc3f9e96f6f0d480c 58 Pfam PF01783 Ribosomal L32p protein family 2 56 2.2E-24 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMM_RS03405 d93f955a31fa658bc3f9e96f6f0d480c 58 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 56 4.0E-24 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMM_RS03405 d93f955a31fa658bc3f9e96f6f0d480c 58 SUPERFAMILY SSF57829 1 57 3.85E-20 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SMM_RS03405 d93f955a31fa658bc3f9e96f6f0d480c 58 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 19.452 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 SUPERFAMILY SSF51412 5 91 7.06E-122 T 22-04-2016 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 SUPERFAMILY SSF51412 217 475 7.06E-122 T 22-04-2016 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 Pfam PF00571 CBS domain 151 201 3.5E-7 T 22-04-2016 IPR000644 CBS domain SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 Pfam PF00571 CBS domain 97 141 4.6E-12 T 22-04-2016 IPR000644 CBS domain SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 PANTHER PTHR11911 4 282 8.4E-237 T 22-04-2016 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 PANTHER PTHR11911 300 484 8.4E-237 T 22-04-2016 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 471 6.3E-161 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 PIRSF PIRSF000130 1 484 1.4E-208 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 PANTHER PTHR11911:SF6 4 282 8.4E-237 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 PANTHER PTHR11911:SF6 300 484 8.4E-237 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 452 1.4E-190 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 Gene3D G3DSA:3.20.20.70 4 483 1.0E-193 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 SMART SM01240 8 471 0.0 T 22-04-2016 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 SUPERFAMILY SSF54631 94 202 4.3E-30 T 22-04-2016 SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 SMART SM00116 158 206 4.0E-7 T 22-04-2016 IPR000644 CBS domain SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 SMART SM00116 97 145 1.7E-12 T 22-04-2016 IPR000644 CBS domain SMM_RS05775 540863b475d184e2ad7e2fbd948cf604 484 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 9 484 81.349 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SMM_RS00345 57c50376cdbfc4607d8a0a96160518e7 999 SUPERFAMILY SSF52777 766 996 7.56E-62 T 22-04-2016 SMM_RS00345 57c50376cdbfc4607d8a0a96160518e7 999 Gene3D G3DSA:3.30.559.10 761 996 2.8E-67 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SMM_RS00345 57c50376cdbfc4607d8a0a96160518e7 999 Gene3D G3DSA:2.40.50.100 23 83 9.6E-5 T 22-04-2016 SMM_RS00345 57c50376cdbfc4607d8a0a96160518e7 999 PANTHER PTHR23151 788 998 1.4E-64 T 22-04-2016 SMM_RS00345 57c50376cdbfc4607d8a0a96160518e7 999 SUPERFAMILY SSF51230 23 83 7.2E-5 T 22-04-2016 IPR011053 Single hybrid motif SMM_RS00345 57c50376cdbfc4607d8a0a96160518e7 999 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 769 997 3.3E-65 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SMM_RS05035 8f3a9a3a37b83324f11c2f473e8fe252 340 SUPERFAMILY SSF54675 2 107 2.83E-24 T 22-04-2016 SMM_RS05035 8f3a9a3a37b83324f11c2f473e8fe252 340 PIRSF PIRSF000484 1 334 1.6E-50 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SMM_RS05035 8f3a9a3a37b83324f11c2f473e8fe252 340 Gene3D G3DSA:3.90.1170.20 2 97 2.5E-18 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 SMM_RS05035 8f3a9a3a37b83324f11c2f473e8fe252 340 Gene3D G3DSA:3.20.20.70 100 307 1.9E-44 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMM_RS05035 8f3a9a3a37b83324f11c2f473e8fe252 340 SUPERFAMILY SSF51690 107 330 1.46E-41 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SMM_RS05550 e8953d15ece786f9d6e6ad3a2dea5b43 163 Pfam PF00466 Ribosomal protein L10 6 101 1.9E-24 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SMM_RS05550 e8953d15ece786f9d6e6ad3a2dea5b43 163 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 24.341 T 22-04-2016 IPR022973 Ribosomal protein L10 SMM_RS05550 e8953d15ece786f9d6e6ad3a2dea5b43 163 SUPERFAMILY SSF160369 4 159 2.62E-44 T 22-04-2016 SMM_RS05550 e8953d15ece786f9d6e6ad3a2dea5b43 163 PANTHER PTHR11560 1 159 6.5E-35 T 22-04-2016 SMM_RS01255 258c816cb3f3d2f50f3a8fcffbe794eb 149 SUPERFAMILY SSF55653 58 144 5.1E-21 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMM_RS01255 258c816cb3f3d2f50f3a8fcffbe794eb 149 Gene3D G3DSA:3.40.5.10 1 49 1.3E-20 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMM_RS01255 258c816cb3f3d2f50f3a8fcffbe794eb 149 SUPERFAMILY SSF55658 1 53 5.76E-16 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SMM_RS01255 258c816cb3f3d2f50f3a8fcffbe794eb 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 3.2E-35 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01255 258c816cb3f3d2f50f3a8fcffbe794eb 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 145 3.1E-19 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMM_RS01255 258c816cb3f3d2f50f3a8fcffbe794eb 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.4E-21 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMM_RS01255 258c816cb3f3d2f50f3a8fcffbe794eb 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal SMM_RS01255 258c816cb3f3d2f50f3a8fcffbe794eb 149 PANTHER PTHR21368 1 144 5.5E-30 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01255 258c816cb3f3d2f50f3a8fcffbe794eb 149 Gene3D G3DSA:3.10.430.100 61 146 1.2E-18 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal SMM_RS01255 258c816cb3f3d2f50f3a8fcffbe794eb 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 21.244 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS05155 390e5a4f7ece02c007db24e959a4eeca 490 Pfam PF01425 Amidase 23 465 8.1E-116 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMM_RS05155 390e5a4f7ece02c007db24e959a4eeca 490 ProSitePatterns PS00571 Amidases signature. 147 178 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMM_RS05155 390e5a4f7ece02c007db24e959a4eeca 490 Gene3D G3DSA:3.90.1300.10 3 478 4.7E-131 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMM_RS05155 390e5a4f7ece02c007db24e959a4eeca 490 SUPERFAMILY SSF75304 3 477 1.26E-122 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMM_RS05155 390e5a4f7ece02c007db24e959a4eeca 490 PANTHER PTHR11895 1 482 1.1E-144 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SMM_RS05155 390e5a4f7ece02c007db24e959a4eeca 490 PANTHER PTHR11895:SF7 1 482 1.1E-144 T 22-04-2016 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 3 382 36.858 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 Pfam PF00684 DnaJ central domain 159 224 2.4E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 PANTHER PTHR24078:SF190 1 381 4.0E-131 T 22-04-2016 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 SUPERFAMILY SSF49493 279 362 2.35E-15 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 SUPERFAMILY SSF49493 177 182 2.88E-14 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 SUPERFAMILY SSF49493 125 150 2.88E-14 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 SUPERFAMILY SSF49493 230 278 2.88E-14 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 Gene3D G3DSA:2.60.260.20 277 353 1.4E-11 T 22-04-2016 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 PRINTS PR00625 DnaJ domain signature 8 26 5.5E-30 T 22-04-2016 IPR001623 DnaJ domain SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 PRINTS PR00625 DnaJ domain signature 62 81 5.5E-30 T 22-04-2016 IPR001623 DnaJ domain SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 PRINTS PR00625 DnaJ domain signature 42 62 5.5E-30 T 22-04-2016 IPR001623 DnaJ domain SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 PRINTS PR00625 DnaJ domain signature 26 41 5.5E-30 T 22-04-2016 IPR001623 DnaJ domain SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 Gene3D G3DSA:2.10.230.10 153 226 5.2E-20 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 Pfam PF00226 DnaJ domain 6 67 8.7E-28 T 22-04-2016 IPR001623 DnaJ domain SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 Gene3D G3DSA:1.10.287.110 2 113 7.8E-36 T 22-04-2016 IPR001623 DnaJ domain SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 SMART SM00271 5 62 1.6E-31 T 22-04-2016 IPR001623 DnaJ domain SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 PANTHER PTHR24078 1 381 4.0E-131 T 22-04-2016 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 6 368 1.6E-130 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 Pfam PF01556 DnaJ C terminal domain 134 352 6.6E-31 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 SUPERFAMILY SSF57938 146 227 1.11E-17 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 SUPERFAMILY SSF46565 2 108 1.18E-36 T 22-04-2016 IPR001623 DnaJ domain SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 Gene3D G3DSA:2.60.260.20 123 152 5.5E-14 T 22-04-2016 SMM_RS00730 cf8cb79a40d97e962dc370f3acbdd8b0 382 Gene3D G3DSA:2.60.260.20 227 271 5.5E-14 T 22-04-2016 SMM_RS00410 76babe3c3d381ce77535c8d8fa143b90 207 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 207 2.8E-82 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SMM_RS00410 76babe3c3d381ce77535c8d8fa143b90 207 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 207 43.601 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SMM_RS00410 76babe3c3d381ce77535c8d8fa143b90 207 PANTHER PTHR10285:SF46 5 196 3.3E-84 T 22-04-2016 SMM_RS00410 76babe3c3d381ce77535c8d8fa143b90 207 Gene3D G3DSA:3.40.50.2020 3 207 2.4E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMM_RS00410 76babe3c3d381ce77535c8d8fa143b90 207 PANTHER PTHR10285 5 196 3.3E-84 T 22-04-2016 SMM_RS00410 76babe3c3d381ce77535c8d8fa143b90 207 SUPERFAMILY SSF53271 4 205 8.39E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMM_RS00410 76babe3c3d381ce77535c8d8fa143b90 207 Pfam PF14681 Uracil phosphoribosyltransferase 5 206 1.6E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 135 1.9E-49 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 32 67 8.0E-11 T 22-04-2016 SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 SMART SM00649 8 135 1.1E-59 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 61 9.3E-19 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 PANTHER PTHR11661:SF7 3 139 5.7E-44 T 22-04-2016 SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 SUPERFAMILY SSF54747 3 66 1.05E-18 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 PANTHER PTHR11661 3 139 5.7E-44 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 ProSitePatterns PS00359 Ribosomal protein L11 signature. 121 136 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 4 136 25.926 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 Gene3D G3DSA:1.10.10.250 67 135 7.5E-28 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 Pfam PF00298 Ribosomal protein L11, RNA binding domain 66 134 4.5E-22 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 SUPERFAMILY SSF46906 63 135 1.19E-23 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SMM_RS05255 96abed88d7edb4ddc7a07c96ac6d763e 147 Gene3D G3DSA:3.30.1550.10 3 66 5.5E-22 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 SMART SM00962 100 295 4.0E-109 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 Gene3D G3DSA:1.20.120.140 6 89 1.7E-27 T 22-04-2016 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 SMART SM00963 2 87 4.6E-26 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 2.7E-18 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 447 32.907 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 Gene3D G3DSA:3.40.50.300 98 296 3.3E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 Gene3D G3DSA:1.10.260.30 326 429 1.6E-27 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 SUPERFAMILY SSF52540 43 352 3.95E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 Pfam PF02978 Signal peptide binding domain 326 424 9.2E-26 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 SMART SM00382 99 307 3.9E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 PANTHER PTHR11564:SF7 1 432 1.6E-200 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 SUPERFAMILY SSF47446 326 425 2.62E-28 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 TIGRFAM TIGR00959 ffh: signal recognition particle protein 4 425 4.8E-175 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 1.6E-73 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SMM_RS03960 ac79b8c0c8b83cddf0a73ea95ad4c869 447 PANTHER PTHR11564 1 432 1.6E-200 T 22-04-2016 SMM_RS01920 e0d6497744d8c8958bdc0d864b74f356 97 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 97 22.579 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01920 e0d6497744d8c8958bdc0d864b74f356 97 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 97 1.6E-34 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01920 e0d6497744d8c8958bdc0d864b74f356 97 ProSitePatterns PS01169 Ribosomal protein L21 signature. 68 90 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01920 e0d6497744d8c8958bdc0d864b74f356 97 PANTHER PTHR21349 1 97 3.3E-35 T 22-04-2016 SMM_RS01920 e0d6497744d8c8958bdc0d864b74f356 97 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 97 3.1E-38 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SMM_RS01920 e0d6497744d8c8958bdc0d864b74f356 97 SUPERFAMILY SSF141091 1 97 2.62E-34 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 Gene3D G3DSA:1.10.287.180 3 74 1.6E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 SUPERFAMILY SSF46557 5 76 1.83E-23 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 4.4E-28 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 156 4.3E-19 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 Hamap MF_00105 Transcription elongation factor GreA [greA]. 3 156 27.929 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 PANTHER PTHR30437 3 156 5.6E-41 T 22-04-2016 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 7 156 5.5E-49 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 Gene3D G3DSA:3.10.50.30 78 156 3.7E-20 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 18 49 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 SUPERFAMILY SSF54534 82 155 1.57E-14 T 22-04-2016 SMM_RS03015 b21f16c1a1d5dc1d36f8ea235de769f9 156 PIRSF PIRSF006092 1 156 7.4E-44 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SMM_RS02990 9c29f5dca0ff979883c0bd5c62f43875 308 Hamap MF_00152 Probable endonuclease 4 [nfo]. 6 292 38.862 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SMM_RS02990 9c29f5dca0ff979883c0bd5c62f43875 308 SMART SM00518 7 292 2.3E-96 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SMM_RS02990 9c29f5dca0ff979883c0bd5c62f43875 308 SUPERFAMILY SSF51658 6 294 4.84E-83 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMM_RS02990 9c29f5dca0ff979883c0bd5c62f43875 308 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 76 84 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SMM_RS02990 9c29f5dca0ff979883c0bd5c62f43875 308 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 7 289 8.6E-85 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SMM_RS02990 9c29f5dca0ff979883c0bd5c62f43875 308 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 220 236 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SMM_RS02990 9c29f5dca0ff979883c0bd5c62f43875 308 Pfam PF01261 Xylose isomerase-like TIM barrel 31 243 1.1E-29 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMM_RS02990 9c29f5dca0ff979883c0bd5c62f43875 308 Gene3D G3DSA:3.20.20.150 6 290 1.3E-88 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SMM_RS02990 9c29f5dca0ff979883c0bd5c62f43875 308 PANTHER PTHR21445 1 295 8.7E-80 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SMM_RS01335 e7faf333b98218956b897f5e3900c9e7 122 PANTHER PTHR11761 1 122 1.2E-60 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMM_RS01335 e7faf333b98218956b897f5e3900c9e7 122 Gene3D G3DSA:2.40.150.20 1 122 1.2E-46 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMM_RS01335 e7faf333b98218956b897f5e3900c9e7 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 9.0E-49 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMM_RS01335 e7faf333b98218956b897f5e3900c9e7 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.8E-52 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMM_RS01335 e7faf333b98218956b897f5e3900c9e7 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site SMM_RS01335 e7faf333b98218956b897f5e3900c9e7 122 SUPERFAMILY SSF50193 1 122 5.49E-47 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMM_RS01335 e7faf333b98218956b897f5e3900c9e7 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 24.464 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMM_RS01335 e7faf333b98218956b897f5e3900c9e7 122 SMART SM01374 1 122 1.1E-74 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 18 34 1.2E-27 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 203 213 1.2E-27 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 149 170 1.2E-27 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 68 87 1.2E-27 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 5 336 39.52 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 PANTHER PTHR10055 2 339 3.5E-158 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 Pfam PF00579 tRNA synthetases class I (W and Y) 2 292 7.7E-77 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 SUPERFAMILY SSF52374 7 335 4.69E-95 T 22-04-2016 SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 Gene3D G3DSA:1.10.240.10 216 330 1.2E-20 T 22-04-2016 SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 PANTHER PTHR10055:SF10 2 339 3.5E-158 T 22-04-2016 SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 Gene3D G3DSA:3.40.50.620 3 215 2.4E-87 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMM_RS04390 ee66c5fc739244f0910bc04f367010fb 340 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 4 335 2.8E-108 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 6.2E-27 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 203 227 6.2E-27 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 243 260 6.2E-27 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 178 202 6.2E-27 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 6.2E-27 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 138 158 6.2E-27 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 164 1.1E-36 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 PANTHER PTHR11728:SF1 1 333 5.0E-85 T 22-04-2016 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 PIRSF PIRSF000114 1 333 1.6E-95 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 327 27.735 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 SUPERFAMILY SSF51735 7 179 1.83E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 SUPERFAMILY SSF48179 184 330 3.57E-43 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 PANTHER PTHR11728 1 333 5.0E-85 T 22-04-2016 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 Gene3D G3DSA:1.10.1040.10 189 330 2.2E-42 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 185 325 1.6E-41 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SMM_RS01720 5cb094b8d6b2cfe2f744ad230cb9deb2 334 Gene3D G3DSA:3.40.50.720 3 188 2.4E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain SMM_RS04540 c65ffa918f09925817e56a811965969e 539 Pfam PF13684 Dihydroxyacetone kinase family 227 539 1.5E-91 T 22-04-2016 IPR033470 Uncharacterised protein, DhaK domain SMM_RS04540 c65ffa918f09925817e56a811965969e 539 SMART SM01120 33 197 8.5E-62 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SMM_RS04540 c65ffa918f09925817e56a811965969e 539 Pfam PF02734 DAK2 domain 33 196 2.4E-40 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SMM_RS04540 c65ffa918f09925817e56a811965969e 539 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 8 539 3.1E-179 T 22-04-2016 IPR019986 DAK2 domain-containing protein YloV SMM_RS04540 c65ffa918f09925817e56a811965969e 539 SMART SM01121 227 539 2.8E-119 T 22-04-2016 IPR033470 Uncharacterised protein, DhaK domain SMM_RS04540 c65ffa918f09925817e56a811965969e 539 SUPERFAMILY SSF101473 3 198 3.01E-44 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SMM_RS04540 c65ffa918f09925817e56a811965969e 539 PANTHER PTHR33434:SF4 1 539 2.1E-162 T 22-04-2016 SMM_RS04540 c65ffa918f09925817e56a811965969e 539 PANTHER PTHR33434 1 539 2.1E-162 T 22-04-2016 SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 Gene3D G3DSA:1.10.8.60 140 215 6.5E-11 T 22-04-2016 SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 Gene3D G3DSA:1.10.3710.10 324 413 6.4E-23 T 22-04-2016 SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 SMART SM00382 39 152 4.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 SUPERFAMILY SSF52540 3 216 1.18E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 Pfam PF16193 AAA C-terminal domain 171 244 1.3E-16 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 Pfam PF12002 MgsA AAA+ ATPase C terminal 245 410 9.8E-56 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 9 119 8.0E-15 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 Gene3D G3DSA:1.20.272.10 228 323 4.6E-32 T 22-04-2016 SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 Gene3D G3DSA:3.40.50.300 3 139 7.9E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 SUPERFAMILY SSF48019 230 413 9.07E-61 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 PANTHER PTHR13779:SF7 2 396 1.4E-109 T 22-04-2016 SMM_RS03705 00dd6b61800b73f0a5b8442deaca1faf 415 PANTHER PTHR13779 2 396 1.4E-109 T 22-04-2016 SMM_RS02365 7eb28f30ef01ac6d1d6c75c11423d026 131 PANTHER PTHR11390 17 131 1.4E-28 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SMM_RS02365 7eb28f30ef01ac6d1d6c75c11423d026 131 Pfam PF01131 DNA topoisomerase 17 131 5.1E-25 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SMM_RS02365 7eb28f30ef01ac6d1d6c75c11423d026 131 SUPERFAMILY SSF56712 19 131 2.35E-28 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SMM_RS02365 7eb28f30ef01ac6d1d6c75c11423d026 131 Gene3D G3DSA:1.10.460.10 32 131 6.2E-28 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SMM_RS02365 7eb28f30ef01ac6d1d6c75c11423d026 131 PANTHER PTHR11390:SF27 17 131 1.4E-28 T 22-04-2016 SMM_RS04135 a1a687da1a1d855e6f912ea247c2715c 197 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 7 185 7.4E-71 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMM_RS04135 a1a687da1a1d855e6f912ea247c2715c 197 SMART SM00072 5 188 1.9E-60 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SMM_RS04135 a1a687da1a1d855e6f912ea247c2715c 197 Hamap MF_00328 Guanylate kinase [gmk]. 4 188 35.398 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMM_RS04135 a1a687da1a1d855e6f912ea247c2715c 197 PANTHER PTHR23117 8 192 4.2E-82 T 22-04-2016 SMM_RS04135 a1a687da1a1d855e6f912ea247c2715c 197 ProSitePatterns PS00856 Guanylate kinase-like signature. 41 58 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SMM_RS04135 a1a687da1a1d855e6f912ea247c2715c 197 Pfam PF00625 Guanylate kinase 8 186 5.4E-49 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SMM_RS04135 a1a687da1a1d855e6f912ea247c2715c 197 Gene3D G3DSA:3.40.50.300 89 190 3.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS04135 a1a687da1a1d855e6f912ea247c2715c 197 Gene3D G3DSA:3.40.50.300 3 28 3.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS04135 a1a687da1a1d855e6f912ea247c2715c 197 Gene3D G3DSA:3.30.63.10 36 88 8.5E-26 T 22-04-2016 SMM_RS04135 a1a687da1a1d855e6f912ea247c2715c 197 SUPERFAMILY SSF52540 3 190 2.11E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00115 8e8237027172fc9c49d637e6934b9ba4 308 PANTHER PTHR24220:SF86 76 290 9.6E-86 T 22-04-2016 SMM_RS00115 8e8237027172fc9c49d637e6934b9ba4 308 ProSitePatterns PS00211 ABC transporters family signature. 213 227 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SMM_RS00115 8e8237027172fc9c49d637e6934b9ba4 308 PANTHER PTHR24220 76 290 9.6E-86 T 22-04-2016 SMM_RS00115 8e8237027172fc9c49d637e6934b9ba4 308 Pfam PF00005 ABC transporter 94 240 1.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMM_RS00115 8e8237027172fc9c49d637e6934b9ba4 308 SUPERFAMILY SSF52540 74 295 6.66E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00115 8e8237027172fc9c49d637e6934b9ba4 308 Gene3D G3DSA:3.40.50.300 73 291 8.8E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00115 8e8237027172fc9c49d637e6934b9ba4 308 SMART SM00382 103 289 6.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain SMM_RS02355 bcf415090bb8a28bd985970abf9bdc9f 110 Gene3D G3DSA:1.10.10.10 8 73 7.6E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMM_RS02355 bcf415090bb8a28bd985970abf9bdc9f 110 SUPERFAMILY SSF46689 13 78 1.16E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMM_RS02355 bcf415090bb8a28bd985970abf9bdc9f 110 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 72 1.2E-13 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 SMM_RS05870 6b0c9de70530f4598427edc2b749278e 73 Gene3D G3DSA:3.20.70.20 1 45 4.4E-8 T 22-04-2016 SMM_RS05870 6b0c9de70530f4598427edc2b749278e 73 SUPERFAMILY SSF51998 1 53 1.83E-5 T 22-04-2016 SMM_RS05870 6b0c9de70530f4598427edc2b749278e 73 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 1 62 3.8E-8 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SMM_RS00645 67d8aaa407204cf3f3f7e2cd836f99b7 82 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 14 81 6.4E-22 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SMM_RS00645 67d8aaa407204cf3f3f7e2cd836f99b7 82 SUPERFAMILY SSF51998 20 81 2.75E-13 T 22-04-2016 SMM_RS00645 67d8aaa407204cf3f3f7e2cd836f99b7 82 Gene3D G3DSA:3.20.70.20 22 81 1.6E-18 T 22-04-2016 SMM_RS00645 67d8aaa407204cf3f3f7e2cd836f99b7 82 PANTHER PTHR21075 2 81 1.6E-17 T 22-04-2016 SMM_RS04805 8a9ad727eb1942337b4e4bcaa5a5757a 296 PANTHER PTHR30050 56 253 1.2E-29 T 22-04-2016 SMM_RS04805 8a9ad727eb1942337b4e4bcaa5a5757a 296 PANTHER PTHR30050 272 292 1.2E-29 T 22-04-2016 SMM_RS04805 8a9ad727eb1942337b4e4bcaa5a5757a 296 SMART SM00382 138 262 0.0077 T 22-04-2016 IPR003593 AAA+ ATPase domain SMM_RS04805 8a9ad727eb1942337b4e4bcaa5a5757a 296 Gene3D G3DSA:3.40.50.300 95 281 7.4E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS04805 8a9ad727eb1942337b4e4bcaa5a5757a 296 Pfam PF01695 IstB-like ATP binding protein 117 247 1.1E-16 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SMM_RS04805 8a9ad727eb1942337b4e4bcaa5a5757a 296 PANTHER PTHR30050:SF8 56 253 1.2E-29 T 22-04-2016 SMM_RS04805 8a9ad727eb1942337b4e4bcaa5a5757a 296 PANTHER PTHR30050:SF8 272 292 1.2E-29 T 22-04-2016 SMM_RS04805 8a9ad727eb1942337b4e4bcaa5a5757a 296 SUPERFAMILY SSF52540 120 246 1.15E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS03235 ce8396cea4608179fff81a30bd7414f1 250 PANTHER PTHR30363:SF4 1 236 1.7E-41 T 22-04-2016 SMM_RS03235 ce8396cea4608179fff81a30bd7414f1 250 Pfam PF08220 DeoR-like helix-turn-helix domain 23 61 5.0E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMM_RS03235 ce8396cea4608179fff81a30bd7414f1 250 SMART SM00420 6 61 0.0065 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMM_RS03235 ce8396cea4608179fff81a30bd7414f1 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 4.4E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMM_RS03235 ce8396cea4608179fff81a30bd7414f1 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 4.4E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SMM_RS03235 ce8396cea4608179fff81a30bd7414f1 250 SMART SM01134 77 237 3.5E-43 T 22-04-2016 SMM_RS03235 ce8396cea4608179fff81a30bd7414f1 250 Pfam PF00455 DeoR C terminal sensor domain 79 236 5.5E-36 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain SMM_RS03235 ce8396cea4608179fff81a30bd7414f1 250 Gene3D G3DSA:3.40.50.1360 81 218 1.0E-11 T 22-04-2016 SMM_RS03235 ce8396cea4608179fff81a30bd7414f1 250 SUPERFAMILY SSF46785 6 60 3.18E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMM_RS03235 ce8396cea4608179fff81a30bd7414f1 250 SUPERFAMILY SSF100950 78 236 1.67E-25 T 22-04-2016 SMM_RS03235 ce8396cea4608179fff81a30bd7414f1 250 PANTHER PTHR30363 1 236 1.7E-41 T 22-04-2016 SMM_RS04915 76406b7e968934cbc41d9aa53f986ea7 75 PANTHER PTHR11178:SF15 15 75 3.5E-15 T 22-04-2016 SMM_RS04915 76406b7e968934cbc41d9aa53f986ea7 75 SUPERFAMILY SSF117916 2 74 2.45E-22 T 22-04-2016 SMM_RS04915 76406b7e968934cbc41d9aa53f986ea7 75 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 14 74 2.0E-10 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SMM_RS04915 76406b7e968934cbc41d9aa53f986ea7 75 Pfam PF01106 NifU-like domain 8 72 1.0E-24 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SMM_RS04915 76406b7e968934cbc41d9aa53f986ea7 75 PANTHER PTHR11178 15 75 3.5E-15 T 22-04-2016 SMM_RS00955 be3b2f9ce4920a84a274f959372b812c 296 SMART SM00470 38 127 4.7E-37 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SMM_RS00955 be3b2f9ce4920a84a274f959372b812c 296 Gene3D G3DSA:3.90.1530.10 30 133 6.0E-39 T 22-04-2016 SMM_RS00955 be3b2f9ce4920a84a274f959372b812c 296 PANTHER PTHR33375:SF3 1 291 1.5E-89 T 22-04-2016 SMM_RS00955 be3b2f9ce4920a84a274f959372b812c 296 PANTHER PTHR33375 1 291 1.5E-89 T 22-04-2016 SMM_RS00955 be3b2f9ce4920a84a274f959372b812c 296 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 34 214 7.0E-59 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SMM_RS00955 be3b2f9ce4920a84a274f959372b812c 296 SUPERFAMILY SSF110849 39 176 1.15E-34 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SMM_RS00955 be3b2f9ce4920a84a274f959372b812c 296 Pfam PF02195 ParB-like nuclease domain 39 127 2.4E-28 T 22-04-2016 IPR003115 ParB/Sulfiredoxin SMM_RS04320 c624df6b2fa7c15aff91d2608400eb2d 90 Gene3D G3DSA:4.10.520.10 1 90 1.2E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMM_RS04320 c624df6b2fa7c15aff91d2608400eb2d 90 PANTHER PTHR33175 1 90 1.0E-34 T 22-04-2016 SMM_RS04320 c624df6b2fa7c15aff91d2608400eb2d 90 SMART SM00411 1 90 1.4E-33 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMM_RS04320 c624df6b2fa7c15aff91d2608400eb2d 90 SUPERFAMILY SSF47729 1 90 5.0E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SMM_RS04320 c624df6b2fa7c15aff91d2608400eb2d 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.5E-29 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMM_RS04320 c624df6b2fa7c15aff91d2608400eb2d 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SMM_RS04320 c624df6b2fa7c15aff91d2608400eb2d 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.1E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMM_RS04320 c624df6b2fa7c15aff91d2608400eb2d 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.1E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMM_RS04320 c624df6b2fa7c15aff91d2608400eb2d 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.1E-14 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SMM_RS01365 0b50da58edba91bbabf14d85b7cd6120 118 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 118 6.0E-43 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01365 0b50da58edba91bbabf14d85b7cd6120 118 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 5 118 28.026 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01365 0b50da58edba91bbabf14d85b7cd6120 118 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 118 5.6E-47 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01365 0b50da58edba91bbabf14d85b7cd6120 118 PANTHER PTHR12899 5 118 8.2E-41 T 22-04-2016 SMM_RS01365 0b50da58edba91bbabf14d85b7cd6120 118 SUPERFAMILY SSF53137 7 116 4.58E-48 T 22-04-2016 SMM_RS01365 0b50da58edba91bbabf14d85b7cd6120 118 Gene3D G3DSA:3.30.420.100 23 118 4.9E-36 T 22-04-2016 SMM_RS03650 4573741b1c530a9c2cbcd8e3609fac0a 158 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 150 4.9E-36 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMM_RS03650 4573741b1c530a9c2cbcd8e3609fac0a 158 Pfam PF02130 Uncharacterized protein family UPF0054 19 149 1.9E-39 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMM_RS03650 4573741b1c530a9c2cbcd8e3609fac0a 158 Gene3D G3DSA:3.40.390.30 13 154 6.4E-39 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 SMM_RS03650 4573741b1c530a9c2cbcd8e3609fac0a 158 PANTHER PTHR22881 24 154 1.5E-32 T 22-04-2016 SMM_RS03650 4573741b1c530a9c2cbcd8e3609fac0a 158 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 120 130 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site SMM_RS03650 4573741b1c530a9c2cbcd8e3609fac0a 158 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 154 21.068 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SMM_RS03650 4573741b1c530a9c2cbcd8e3609fac0a 158 SUPERFAMILY SSF55486 8 153 2.32E-37 T 22-04-2016 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 298 6.0E-15 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 316 1.6E-105 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 SMART SM00662 20 232 1.3E-67 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 Gene3D G3DSA:1.10.150.20 245 316 1.1E-25 T 22-04-2016 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 SUPERFAMILY SSF56553 50 176 1.57E-34 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 Gene3D G3DSA:2.170.120.12 50 175 4.0E-35 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 SUPERFAMILY SSF47789 253 315 4.32E-20 T 22-04-2016 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 226 3.4E-20 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 317 34.306 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 SUPERFAMILY SSF55257 4 50 1.08E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 SUPERFAMILY SSF55257 177 231 1.08E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 156 2.4E-21 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 PANTHER PTHR32108 1 317 2.3E-99 T 22-04-2016 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 3.9E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 PANTHER PTHR32108:SF0 1 317 2.3E-99 T 22-04-2016 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 Gene3D G3DSA:3.30.1360.10 8 48 1.8E-32 T 22-04-2016 SMM_RS01410 17986b04e6bbbd8f81b1679eef108075 317 Gene3D G3DSA:3.30.1360.10 176 229 1.8E-32 T 22-04-2016 SMM_RS05350 1f6f363e92523fdf3cfc2d465e50400e 136 PANTHER PTHR23089 5 114 4.8E-38 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMM_RS05350 1f6f363e92523fdf3cfc2d465e50400e 136 PRINTS PR00332 Histidine triad family signature 7 23 2.1E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMM_RS05350 1f6f363e92523fdf3cfc2d465e50400e 136 PRINTS PR00332 Histidine triad family signature 28 46 2.1E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMM_RS05350 1f6f363e92523fdf3cfc2d465e50400e 136 PRINTS PR00332 Histidine triad family signature 95 105 2.1E-17 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMM_RS05350 1f6f363e92523fdf3cfc2d465e50400e 136 PANTHER PTHR23089:SF14 5 114 4.8E-38 T 22-04-2016 SMM_RS05350 1f6f363e92523fdf3cfc2d465e50400e 136 Pfam PF01230 HIT domain 14 109 3.2E-26 T 22-04-2016 IPR001310 Histidine triad (HIT) protein SMM_RS05350 1f6f363e92523fdf3cfc2d465e50400e 136 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 22-04-2016 IPR019808 Histidine triad, conserved site SMM_RS05350 1f6f363e92523fdf3cfc2d465e50400e 136 Gene3D G3DSA:3.30.428.10 3 109 1.0E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SMM_RS05350 1f6f363e92523fdf3cfc2d465e50400e 136 SUPERFAMILY SSF54197 4 117 1.53E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 SMM_RS05965 a4ccdda1751a3ee2c0c865ca51017406 65 SUPERFAMILY SSF52794 44 65 2.88E-6 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SMM_RS05965 a4ccdda1751a3ee2c0c865ca51017406 65 Gene3D G3DSA:3.40.50.2300 39 65 1.7E-8 T 22-04-2016 SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 Pfam PF02817 e3 binding domain 133 168 2.4E-12 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 Gene3D G3DSA:4.10.320.10 130 174 2.6E-16 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 Gene3D G3DSA:2.40.50.100 3 95 2.3E-22 T 22-04-2016 SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 Gene3D G3DSA:3.30.559.10 192 428 2.1E-92 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 Pfam PF00364 Biotin-requiring enzyme 3 75 9.8E-19 T 22-04-2016 IPR000089 Biotin/lipoyl attachment SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 SUPERFAMILY SSF52777 191 429 1.51E-87 T 22-04-2016 SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 PANTHER PTHR23151:SF68 8 429 9.4E-147 T 22-04-2016 SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 SUPERFAMILY SSF51230 2 94 3.66E-22 T 22-04-2016 IPR011053 Single hybrid motif SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 SUPERFAMILY SSF47005 130 171 6.15E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 199 428 3.6E-89 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SMM_RS01550 2705fc0584ca70644180943d4600c65d 429 PANTHER PTHR23151 8 429 9.4E-147 T 22-04-2016 SMM_RS03955 e4414de9853c6d980917611581e57df7 240 Pfam PF00696 Amino acid kinase family 6 216 1.7E-27 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMM_RS03955 e4414de9853c6d980917611581e57df7 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 3 237 37.596 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMM_RS03955 e4414de9853c6d980917611581e57df7 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 237 8.1E-88 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMM_RS03955 e4414de9853c6d980917611581e57df7 240 Gene3D G3DSA:3.40.1160.10 2 237 8.7E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMM_RS03955 e4414de9853c6d980917611581e57df7 240 PANTHER PTHR21499:SF23 1 238 1.1E-86 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMM_RS03955 e4414de9853c6d980917611581e57df7 240 PANTHER PTHR21499 1 238 1.1E-86 T 22-04-2016 SMM_RS03955 e4414de9853c6d980917611581e57df7 240 PIRSF PIRSF005650 1 240 2.1E-86 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SMM_RS03955 e4414de9853c6d980917611581e57df7 240 SUPERFAMILY SSF53633 4 238 9.43E-62 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SMM_RS04710 715727f9f53908e0548fca4503fcfedc 174 Gene3D G3DSA:3.40.50.2020 1 172 1.4E-54 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMM_RS04710 715727f9f53908e0548fca4503fcfedc 174 PANTHER PTHR22573:SF56 7 174 1.3E-41 T 22-04-2016 SMM_RS04710 715727f9f53908e0548fca4503fcfedc 174 Pfam PF00156 Phosphoribosyl transferase domain 14 158 7.2E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMM_RS04710 715727f9f53908e0548fca4503fcfedc 174 SUPERFAMILY SSF53271 3 173 1.27E-42 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMM_RS04710 715727f9f53908e0548fca4503fcfedc 174 PANTHER PTHR22573 7 174 1.3E-41 T 22-04-2016 SMM_RS00095 e0a9384ddd92a2e3eae6d1f1fc7a4cc4 285 SUPERFAMILY SSF118352 230 283 2.88E-14 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SMM_RS00095 e0a9384ddd92a2e3eae6d1f1fc7a4cc4 285 PANTHER PTHR30111:SF1 1 283 3.7E-58 T 22-04-2016 SMM_RS00095 e0a9384ddd92a2e3eae6d1f1fc7a4cc4 285 PIRSF PIRSF005261 1 285 8.2E-64 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SMM_RS00095 e0a9384ddd92a2e3eae6d1f1fc7a4cc4 285 Pfam PF01430 Hsp33 protein 2 276 7.4E-70 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SMM_RS00095 e0a9384ddd92a2e3eae6d1f1fc7a4cc4 285 Gene3D G3DSA:3.90.1280.10 231 283 6.9E-16 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SMM_RS00095 e0a9384ddd92a2e3eae6d1f1fc7a4cc4 285 PANTHER PTHR30111 1 283 3.7E-58 T 22-04-2016 SMM_RS00095 e0a9384ddd92a2e3eae6d1f1fc7a4cc4 285 SUPERFAMILY SSF64397 1 238 6.15E-58 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SMM_RS00095 e0a9384ddd92a2e3eae6d1f1fc7a4cc4 285 Gene3D G3DSA:3.55.30.10 1 227 1.2E-56 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SMM_RS04185 8a55a3fb4ebca7e7733d516d2ed07c25 311 Pfam PF01479 S4 domain 22 64 3.4E-5 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMM_RS04185 8a55a3fb4ebca7e7733d516d2ed07c25 311 SUPERFAMILY SSF55174 26 112 7.85E-8 T 22-04-2016 SMM_RS04185 8a55a3fb4ebca7e7733d516d2ed07c25 311 PANTHER PTHR11079 8 289 4.4E-38 T 22-04-2016 SMM_RS04185 8a55a3fb4ebca7e7733d516d2ed07c25 311 Gene3D G3DSA:3.10.290.10 22 69 3.3E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SMM_RS04185 8a55a3fb4ebca7e7733d516d2ed07c25 311 Pfam PF00849 RNA pseudouridylate synthase 97 256 1.3E-23 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMM_RS04185 8a55a3fb4ebca7e7733d516d2ed07c25 311 SUPERFAMILY SSF55120 89 301 2.08E-41 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SMM_RS04185 8a55a3fb4ebca7e7733d516d2ed07c25 311 PANTHER PTHR11079:SF84 8 289 4.4E-38 T 22-04-2016 SMM_RS01930 bb445be4110e7ad08f75769004419e53 96 Gene3D G3DSA:2.40.50.100 29 92 1.5E-28 T 22-04-2016 SMM_RS01930 bb445be4110e7ad08f75769004419e53 96 ProSitePatterns PS00831 Ribosomal protein L27 signature. 43 57 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01930 bb445be4110e7ad08f75769004419e53 96 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 10 93 26.142 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01930 bb445be4110e7ad08f75769004419e53 96 Pfam PF01016 Ribosomal L27 protein 11 90 1.0E-33 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01930 bb445be4110e7ad08f75769004419e53 96 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 37 78 3.0E-14 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01930 bb445be4110e7ad08f75769004419e53 96 PANTHER PTHR15893 3 94 1.4E-41 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01930 bb445be4110e7ad08f75769004419e53 96 TIGRFAM TIGR00062 L27: ribosomal protein bL27 10 90 3.5E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01930 bb445be4110e7ad08f75769004419e53 96 PRINTS PR00063 Ribosomal protein L27 signature 63 87 6.8E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01930 bb445be4110e7ad08f75769004419e53 96 PRINTS PR00063 Ribosomal protein L27 signature 13 37 6.8E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01930 bb445be4110e7ad08f75769004419e53 96 PRINTS PR00063 Ribosomal protein L27 signature 38 62 6.8E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01930 bb445be4110e7ad08f75769004419e53 96 SUPERFAMILY SSF110324 11 92 9.42E-31 T 22-04-2016 SMM_RS00150 8d3788cdb596b3ee19089c3703fb2c6f 225 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 223 1.1E-37 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SMM_RS00150 8d3788cdb596b3ee19089c3703fb2c6f 225 PANTHER PTHR32125:SF6 1 224 3.4E-27 T 22-04-2016 SMM_RS00150 8d3788cdb596b3ee19089c3703fb2c6f 225 PANTHER PTHR32125 1 224 3.4E-27 T 22-04-2016 SMM_RS00150 8d3788cdb596b3ee19089c3703fb2c6f 225 Gene3D G3DSA:3.90.550.10 5 223 3.6E-43 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMM_RS00150 8d3788cdb596b3ee19089c3703fb2c6f 225 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 101 108 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SMM_RS00150 8d3788cdb596b3ee19089c3703fb2c6f 225 SUPERFAMILY SSF53448 5 223 1.6E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SMM_RS03060 bb61123b73a20343bd292de15b9a5768 94 SMART SM00465 5 85 0.0091 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SMM_RS03060 bb61123b73a20343bd292de15b9a5768 94 PANTHER PTHR34477:SF1 1 92 4.9E-31 T 22-04-2016 SMM_RS03060 bb61123b73a20343bd292de15b9a5768 94 Pfam PF01541 GIY-YIG catalytic domain 6 77 3.1E-14 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SMM_RS03060 bb61123b73a20343bd292de15b9a5768 94 PANTHER PTHR34477 1 92 4.9E-31 T 22-04-2016 SMM_RS03060 bb61123b73a20343bd292de15b9a5768 94 SUPERFAMILY SSF82771 6 81 3.27E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily SMM_RS04910 dd0ed0b08079ec64c86b9b30944a4d5d 333 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 124 4.8E-43 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMM_RS04910 dd0ed0b08079ec64c86b9b30944a4d5d 333 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 13 326 1.5E-106 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMM_RS04910 dd0ed0b08079ec64c86b9b30944a4d5d 333 SMART SM01400 8 124 4.5E-62 T 22-04-2016 SMM_RS04910 dd0ed0b08079ec64c86b9b30944a4d5d 333 Gene3D G3DSA:3.40.50.2020 169 296 3.8E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMM_RS04910 dd0ed0b08079ec64c86b9b30944a4d5d 333 Gene3D G3DSA:3.40.50.2020 4 168 3.7E-64 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMM_RS04910 dd0ed0b08079ec64c86b9b30944a4d5d 333 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 132 147 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 SMM_RS04910 dd0ed0b08079ec64c86b9b30944a4d5d 333 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 8 327 43.556 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SMM_RS04910 dd0ed0b08079ec64c86b9b30944a4d5d 333 PANTHER PTHR10210 1 332 2.1E-139 T 22-04-2016 SMM_RS04910 dd0ed0b08079ec64c86b9b30944a4d5d 333 Pfam PF00156 Phosphoribosyl transferase domain 155 292 3.2E-18 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SMM_RS04910 dd0ed0b08079ec64c86b9b30944a4d5d 333 PANTHER PTHR10210:SF41 1 332 2.1E-139 T 22-04-2016 SMM_RS04910 dd0ed0b08079ec64c86b9b30944a4d5d 333 SUPERFAMILY SSF53271 73 294 7.49E-54 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like SMM_RS01345 ff4b3f712269c27ce278f4379190668b 179 PIRSF PIRSF002161 1 179 1.3E-64 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 SMM_RS01345 ff4b3f712269c27ce278f4379190668b 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 43.123 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01345 ff4b3f712269c27ce278f4379190668b 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.4E-43 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal SMM_RS01345 ff4b3f712269c27ce278f4379190668b 179 Gene3D G3DSA:3.30.1440.10 1 179 3.2E-74 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SMM_RS01345 ff4b3f712269c27ce278f4379190668b 179 PANTHER PTHR11994 1 178 3.3E-81 T 22-04-2016 SMM_RS01345 ff4b3f712269c27ce278f4379190668b 179 SUPERFAMILY SSF55282 3 179 3.77E-73 T 22-04-2016 IPR022803 Ribosomal protein L5 domain SMM_RS01345 ff4b3f712269c27ce278f4379190668b 179 Pfam PF00281 Ribosomal protein L5 25 80 2.5E-21 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal SMM_RS05545 cd3c57e470bcf3ff7c9b3bf557735663 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 122 3.0E-13 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SMM_RS05545 cd3c57e470bcf3ff7c9b3bf557735663 122 SUPERFAMILY SSF54736 55 122 1.33E-17 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMM_RS05545 cd3c57e470bcf3ff7c9b3bf557735663 122 SUPERFAMILY SSF48300 3 48 1.83E-10 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS05545 cd3c57e470bcf3ff7c9b3bf557735663 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 7.3E-22 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SMM_RS05545 cd3c57e470bcf3ff7c9b3bf557735663 122 Gene3D G3DSA:1.20.5.710 2 49 5.7E-17 T 22-04-2016 SMM_RS05545 cd3c57e470bcf3ff7c9b3bf557735663 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 122 18.459 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS05545 cd3c57e470bcf3ff7c9b3bf557735663 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 48 3.4E-13 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS05545 cd3c57e470bcf3ff7c9b3bf557735663 122 Gene3D G3DSA:3.30.1390.10 54 122 8.8E-23 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SMM_RS05545 cd3c57e470bcf3ff7c9b3bf557735663 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 1.2E-34 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00615 2ea95c5e3b31acfeb55ffaa2c87446c3 127 SUPERFAMILY SSF56281 9 116 4.73E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMM_RS00615 2ea95c5e3b31acfeb55ffaa2c87446c3 127 PANTHER PTHR30619 2 106 2.3E-18 T 22-04-2016 SMM_RS00615 2ea95c5e3b31acfeb55ffaa2c87446c3 127 PANTHER PTHR30619:SF2 2 106 2.3E-18 T 22-04-2016 SMM_RS00615 2ea95c5e3b31acfeb55ffaa2c87446c3 127 Gene3D G3DSA:3.60.15.10 10 98 1.5E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase SMM_RS01095 5126ccc131149726ec3e3ad5063b2389 290 PANTHER PTHR21091:SF18 7 222 9.0E-70 T 22-04-2016 SMM_RS01095 5126ccc131149726ec3e3ad5063b2389 290 PANTHER PTHR21091 7 222 9.0E-70 T 22-04-2016 SMM_RS01095 5126ccc131149726ec3e3ad5063b2389 290 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 13 288 1.7E-76 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMM_RS01095 5126ccc131149726ec3e3ad5063b2389 290 SUPERFAMILY SSF53790 11 232 1.15E-66 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SMM_RS01095 5126ccc131149726ec3e3ad5063b2389 290 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMM_RS01095 5126ccc131149726ec3e3ad5063b2389 290 Gene3D G3DSA:3.30.950.10 122 235 1.7E-34 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SMM_RS01095 5126ccc131149726ec3e3ad5063b2389 290 Gene3D G3DSA:3.40.1010.10 12 119 5.0E-10 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SMM_RS01095 5126ccc131149726ec3e3ad5063b2389 290 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 12 234 32.949 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMM_RS01095 5126ccc131149726ec3e3ad5063b2389 290 PIRSF PIRSF005917 1 290 8.7E-93 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SMM_RS01095 5126ccc131149726ec3e3ad5063b2389 290 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 12 213 1.4E-19 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SMM_RS05860 cb0e13fe36d0066fa4535ac0b8e5f7a9 122 SUPERFAMILY SSF53686 3 112 4.32E-30 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMM_RS05860 cb0e13fe36d0066fa4535ac0b8e5f7a9 122 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 113 2.0E-23 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SMM_RS05860 cb0e13fe36d0066fa4535ac0b8e5f7a9 122 PANTHER PTHR10314:SF17 1 111 1.2E-41 T 22-04-2016 SMM_RS05860 cb0e13fe36d0066fa4535ac0b8e5f7a9 122 Gene3D G3DSA:3.40.50.1100 50 111 4.1E-19 T 22-04-2016 SMM_RS05860 cb0e13fe36d0066fa4535ac0b8e5f7a9 122 PANTHER PTHR10314 1 111 1.2E-41 T 22-04-2016 SMM_RS02050 91daa0f0aa28098293311d56df7150f7 182 PIRSF PIRSF019345 1 182 9.7E-52 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SMM_RS02050 91daa0f0aa28098293311d56df7150f7 182 SUPERFAMILY SSF46785 86 160 7.75E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMM_RS02050 91daa0f0aa28098293311d56df7150f7 182 SUPERFAMILY SSF46785 2 80 4.3E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMM_RS02050 91daa0f0aa28098293311d56df7150f7 182 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 8 176 5.0E-43 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SMM_RS02050 91daa0f0aa28098293311d56df7150f7 182 PANTHER PTHR34298 1 179 2.5E-48 T 22-04-2016 SMM_RS02050 91daa0f0aa28098293311d56df7150f7 182 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 181 31.053 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SMM_RS02050 91daa0f0aa28098293311d56df7150f7 182 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 169 8.6E-51 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SMM_RS02050 91daa0f0aa28098293311d56df7150f7 182 PANTHER PTHR34298:SF2 1 179 2.5E-48 T 22-04-2016 SMM_RS02050 91daa0f0aa28098293311d56df7150f7 182 Gene3D G3DSA:1.10.10.10 1 79 3.7E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMM_RS02050 91daa0f0aa28098293311d56df7150f7 182 Gene3D G3DSA:1.10.10.10 87 160 7.0E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMM_RS00630 b8e9b65ed7d60695a4293e682357cf48 83 SUPERFAMILY SSF46992 3 83 1.57E-24 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00630 b8e9b65ed7d60695a4293e682357cf48 83 Pfam PF01649 Ribosomal protein S20 2 83 1.2E-25 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00630 b8e9b65ed7d60695a4293e682357cf48 83 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 83 14.374 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00630 b8e9b65ed7d60695a4293e682357cf48 83 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 82 9.9E-21 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00630 b8e9b65ed7d60695a4293e682357cf48 83 Gene3D G3DSA:1.20.58.110 1 83 2.0E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00630 b8e9b65ed7d60695a4293e682357cf48 83 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 79 7.0E-13 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00630 b8e9b65ed7d60695a4293e682357cf48 83 PANTHER PTHR33398 1 83 1.9E-26 T 22-04-2016 SMM_RS00950 a5f5f23eadd07999dc70906e293f049e 256 PANTHER PTHR13696:SF52 1 254 6.6E-84 T 22-04-2016 SMM_RS00950 a5f5f23eadd07999dc70906e293f049e 256 PANTHER PTHR13696 1 254 6.6E-84 T 22-04-2016 SMM_RS00950 a5f5f23eadd07999dc70906e293f049e 256 SUPERFAMILY SSF52540 1 253 1.24E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00950 a5f5f23eadd07999dc70906e293f049e 256 Pfam PF13614 AAA domain 2 179 1.3E-64 T 22-04-2016 IPR025669 AAA domain SMM_RS00950 a5f5f23eadd07999dc70906e293f049e 256 Gene3D G3DSA:3.40.50.300 3 253 1.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS00950 a5f5f23eadd07999dc70906e293f049e 256 PRINTS PR00091 Nitrogenase component II signature 31 46 4.5E-5 T 22-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 SMM_RS00950 a5f5f23eadd07999dc70906e293f049e 256 PRINTS PR00091 Nitrogenase component II signature 9 22 4.5E-5 T 22-04-2016 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL GO:0005524|GO:0016491|GO:0055114 SMM_RS06140 a43fbafe45c69e8e63adb2cbc84fd1e4 140 Pfam PF00367 phosphotransferase system, EIIB 66 94 8.6E-10 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SMM_RS06140 a43fbafe45c69e8e63adb2cbc84fd1e4 140 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 75 92 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SMM_RS06140 a43fbafe45c69e8e63adb2cbc84fd1e4 140 SUPERFAMILY SSF55604 63 137 8.11E-14 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SMM_RS06140 a43fbafe45c69e8e63adb2cbc84fd1e4 140 Gene3D G3DSA:3.30.1360.60 59 138 2.8E-19 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SMM_RS06140 a43fbafe45c69e8e63adb2cbc84fd1e4 140 PANTHER PTHR30009 26 137 8.3E-14 T 22-04-2016 SMM_RS06140 a43fbafe45c69e8e63adb2cbc84fd1e4 140 PANTHER PTHR30009:SF4 26 137 8.3E-14 T 22-04-2016 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 Gene3D G3DSA:3.10.150.10 127 251 1.2E-26 T 22-04-2016 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 Gene3D G3DSA:3.10.150.10 1 122 1.8E-17 T 22-04-2016 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 122 1.1E-19 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 PANTHER PTHR30478 3 372 3.9E-84 T 22-04-2016 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 Gene3D G3DSA:3.10.150.10 252 370 4.5E-26 T 22-04-2016 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 249 370 8.0E-26 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 SMART SM00480 17 367 3.1E-127 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 370 2.2E-108 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 Pfam PF02767 DNA polymerase III beta subunit, central domain 134 246 7.0E-28 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 PIRSF PIRSF000804 1 371 1.7E-78 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 SUPERFAMILY SSF55979 130 249 1.02E-21 T 22-04-2016 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 SUPERFAMILY SSF55979 249 370 2.47E-27 T 22-04-2016 SMM_RS00010 2f3f17c04392595fa7cf47edebd815e3 372 SUPERFAMILY SSF55979 1 122 1.32E-17 T 22-04-2016 SMM_RS04165 1bf825b1c64aa4752c00399ae4c42932 193 Gene3D G3DSA:3.30.420.40 1 101 3.6E-19 T 22-04-2016 SMM_RS04165 1bf825b1c64aa4752c00399ae4c42932 193 SUPERFAMILY SSF53067 1 85 4.53E-17 T 22-04-2016 SMM_RS04165 1bf825b1c64aa4752c00399ae4c42932 193 PANTHER PTHR11735 1 82 1.8E-16 T 22-04-2016 SMM_RS04165 1bf825b1c64aa4752c00399ae4c42932 193 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 145 1.9E-26 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 SMM_RS04165 1bf825b1c64aa4752c00399ae4c42932 193 Pfam PF00814 Glycoprotease family 32 120 1.7E-12 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SMM_RS04165 1bf825b1c64aa4752c00399ae4c42932 193 PANTHER PTHR11735:SF11 1 82 1.8E-16 T 22-04-2016 SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 Gene3D G3DSA:2.30.22.10 164 221 9.9E-19 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 Pfam PF01025 GrpE 59 221 3.9E-40 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 PANTHER PTHR21237 46 219 9.1E-33 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 Hamap MF_01151 Protein GrpE [grpE]. 4 221 18.166 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 PRINTS PR00773 GrpE protein signature 90 106 1.7E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 PRINTS PR00773 GrpE protein signature 118 133 1.7E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 PRINTS PR00773 GrpE protein signature 173 188 1.7E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 PRINTS PR00773 GrpE protein signature 200 219 1.7E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 Gene3D G3DSA:3.90.20.20 68 157 7.2E-20 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 ProSitePatterns PS01071 grpE protein signature. 176 219 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 SUPERFAMILY SSF58014 68 162 7.98E-19 T 22-04-2016 SMM_RS00720 2781ae7717ba6e32d36845adcbc9dd32 221 SUPERFAMILY SSF51064 171 221 4.71E-14 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SMM_RS04635 2f2ff67753ddb5d8a90ab18e5bc26189 99 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 4 85 4.6E-5 T 22-04-2016 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 SMM_RS04635 2f2ff67753ddb5d8a90ab18e5bc26189 99 SUPERFAMILY SSF55315 4 97 3.3E-12 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SMM_RS04635 2f2ff67753ddb5d8a90ab18e5bc26189 99 Gene3D G3DSA:3.30.1330.30 3 94 2.3E-9 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SMM_RS03860 d2d8cfcdb2da5c55cd4c593835e8482d 65 Gene3D G3DSA:2.60.40.1180 12 47 9.3E-4 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta SMM_RS01925 8d6ae3cc3b52abd3db7b9685c4537588 103 Pfam PF04327 Cysteine peptidase C108, N-terminal of ribosomal L27 1 97 3.3E-21 T 22-04-2016 IPR007422 Cysteine peptidase C108, N-terminal of ribosomal L27 SMM_RS01925 8d6ae3cc3b52abd3db7b9685c4537588 103 SUPERFAMILY SSF118010 1 101 5.49E-24 T 22-04-2016 SMM_RS01925 8d6ae3cc3b52abd3db7b9685c4537588 103 Gene3D G3DSA:3.30.70.1490 6 101 2.7E-12 T 22-04-2016 SMM_RS05320 5e83640df0f5706c98decc604e07269a 147 Pfam PF01592 NifU-like N terminal domain 11 125 1.6E-14 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 SMM_RS05320 5e83640df0f5706c98decc604e07269a 147 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 10 135 6.5E-28 T 22-04-2016 SMM_RS05320 5e83640df0f5706c98decc604e07269a 147 SUPERFAMILY SSF82649 7 144 1.12E-33 T 22-04-2016 SMM_RS05320 5e83640df0f5706c98decc604e07269a 147 Gene3D G3DSA:3.90.1010.10 10 145 3.7E-24 T 22-04-2016 SMM_RS01470 5e25381da99c7085309fd2b0dbc10bb3 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SMM_RS01470 5e25381da99c7085309fd2b0dbc10bb3 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 7.8E-29 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SMM_RS01470 5e25381da99c7085309fd2b0dbc10bb3 87 PANTHER PTHR33705 1 84 1.2E-23 T 22-04-2016 SMM_RS01470 5e25381da99c7085309fd2b0dbc10bb3 87 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SMM_RS01470 5e25381da99c7085309fd2b0dbc10bb3 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.7E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SMM_RS01470 5e25381da99c7085309fd2b0dbc10bb3 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.7E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SMM_RS01470 5e25381da99c7085309fd2b0dbc10bb3 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.7E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SMM_RS01470 5e25381da99c7085309fd2b0dbc10bb3 87 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.3E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SMM_RS01470 5e25381da99c7085309fd2b0dbc10bb3 87 SUPERFAMILY SSF55594 1 84 3.27E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SMM_RS01470 5e25381da99c7085309fd2b0dbc10bb3 87 Gene3D G3DSA:3.30.1340.10 1 83 4.2E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like SMM_RS04140 58989b747d304e1bb087ba05ef053d47 191 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 175 9.0E-35 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMM_RS04140 58989b747d304e1bb087ba05ef053d47 191 Gene3D G3DSA:3.40.50.150 1 187 2.2E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMM_RS04140 58989b747d304e1bb087ba05ef053d47 191 PANTHER PTHR18895:SF60 1 191 2.0E-27 T 22-04-2016 SMM_RS04140 58989b747d304e1bb087ba05ef053d47 191 SUPERFAMILY SSF53335 1 180 1.95E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMM_RS04140 58989b747d304e1bb087ba05ef053d47 191 PANTHER PTHR18895 1 191 2.0E-27 T 22-04-2016 SMM_RS04140 58989b747d304e1bb087ba05ef053d47 191 Pfam PF03602 Conserved hypothetical protein 95 1 179 9.2E-44 T 22-04-2016 SMM_RS04140 58989b747d304e1bb087ba05ef053d47 191 PIRSF PIRSF004553 1 184 3.4E-39 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMM_RS05670 b8d25af20d8a85f4a157176af1d822a1 281 Gene3D G3DSA:3.40.50.150 4 207 2.2E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMM_RS05670 b8d25af20d8a85f4a157176af1d822a1 281 PANTHER PTHR11727 6 278 2.4E-71 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SMM_RS05670 b8d25af20d8a85f4a157176af1d822a1 281 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 13 277 46.582 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SMM_RS05670 b8d25af20d8a85f4a157176af1d822a1 281 Gene3D G3DSA:1.10.8.100 209 277 1.7E-12 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like SMM_RS05670 b8d25af20d8a85f4a157176af1d822a1 281 SUPERFAMILY SSF53335 9 277 4.92E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SMM_RS05670 b8d25af20d8a85f4a157176af1d822a1 281 Pfam PF00398 Ribosomal RNA adenine dimethylase 15 275 1.6E-57 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SMM_RS05670 b8d25af20d8a85f4a157176af1d822a1 281 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 14 275 5.8E-75 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SMM_RS05670 b8d25af20d8a85f4a157176af1d822a1 281 SMART SM00650 29 206 9.1E-62 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 Gene3D G3DSA:3.40.1380.10 71 187 1.7E-28 T 22-04-2016 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 PRINTS PR00126 ATP synthase gamma subunit signature 261 282 6.3E-32 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 PRINTS PR00126 ATP synthase gamma subunit signature 161 178 6.3E-32 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 6.3E-32 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 PRINTS PR00126 ATP synthase gamma subunit signature 230 249 6.3E-32 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 282 1.1E-83 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 PANTHER PTHR11693 1 285 5.6E-87 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 Gene3D G3DSA:1.10.287.80 232 278 3.6E-27 T 22-04-2016 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 SUPERFAMILY SSF52943 6 282 1.96E-78 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 Gene3D G3DSA:1.10.287.80 198 231 2.3E-23 T 22-04-2016 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 Gene3D G3DSA:1.10.287.80 19 60 2.3E-23 T 22-04-2016 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 269 282 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 Pfam PF00231 ATP synthase 6 282 3.9E-80 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00445 0cbaa95f06acc68f32c88a4883b20c53 285 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 283 30.557 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS04330 daf55dc20072477a4ee3af2b8210ade3 220 SUPERFAMILY SSF51569 1 213 5.55E-85 T 22-04-2016 SMM_RS04330 daf55dc20072477a4ee3af2b8210ade3 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 211 1.1E-87 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SMM_RS04330 daf55dc20072477a4ee3af2b8210ade3 220 PANTHER PTHR10889 1 213 2.8E-108 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SMM_RS04330 daf55dc20072477a4ee3af2b8210ade3 220 PIRSF PIRSF001357 1 219 2.5E-79 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SMM_RS04330 daf55dc20072477a4ee3af2b8210ade3 220 Gene3D G3DSA:3.20.20.70 1 214 7.9E-93 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMM_RS04330 daf55dc20072477a4ee3af2b8210ade3 220 Pfam PF01791 DeoC/LacD family aldolase 12 206 7.4E-20 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SMM_RS04330 daf55dc20072477a4ee3af2b8210ade3 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 36.764 T 22-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SMM_RS04330 daf55dc20072477a4ee3af2b8210ade3 220 SMART SM01133 2 213 5.4E-98 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SMM_RS00165 a7fe645cbdf9d6acdcdd48e6b5267949 74 SUPERFAMILY SSF46911 4 73 1.28E-27 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00165 a7fe645cbdf9d6acdcdd48e6b5267949 74 TIGRFAM TIGR00165 S18: ribosomal protein bS18 6 73 4.6E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00165 a7fe645cbdf9d6acdcdd48e6b5267949 74 PRINTS PR00974 Ribosomal protein S18 family signature 47 61 1.5E-16 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00165 a7fe645cbdf9d6acdcdd48e6b5267949 74 PRINTS PR00974 Ribosomal protein S18 family signature 61 71 1.5E-16 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00165 a7fe645cbdf9d6acdcdd48e6b5267949 74 PRINTS PR00974 Ribosomal protein S18 family signature 29 39 1.5E-16 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00165 a7fe645cbdf9d6acdcdd48e6b5267949 74 PRINTS PR00974 Ribosomal protein S18 family signature 39 46 1.5E-16 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00165 a7fe645cbdf9d6acdcdd48e6b5267949 74 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 74 21.441 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00165 a7fe645cbdf9d6acdcdd48e6b5267949 74 Pfam PF01084 Ribosomal protein S18 19 69 2.2E-26 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00165 a7fe645cbdf9d6acdcdd48e6b5267949 74 Gene3D G3DSA:4.10.640.10 9 73 3.4E-31 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00165 a7fe645cbdf9d6acdcdd48e6b5267949 74 PANTHER PTHR13479 4 73 6.9E-24 T 22-04-2016 SMM_RS00165 a7fe645cbdf9d6acdcdd48e6b5267949 74 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 72 1.0E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS05140 6299fd9f825ba8ca5c30d9ee7f6669f2 232 Gene3D G3DSA:3.40.50.720 3 138 3.6E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain SMM_RS05140 6299fd9f825ba8ca5c30d9ee7f6669f2 232 SUPERFAMILY SSF51735 6 136 1.77E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain SMM_RS05140 6299fd9f825ba8ca5c30d9ee7f6669f2 232 Pfam PF02080 TrkA-C domain 156 220 3.3E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMM_RS05140 6299fd9f825ba8ca5c30d9ee7f6669f2 232 PANTHER PTHR16254 1 163 1.1E-18 T 22-04-2016 SMM_RS05140 6299fd9f825ba8ca5c30d9ee7f6669f2 232 Gene3D G3DSA:3.30.70.1450 162 221 5.3E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMM_RS05140 6299fd9f825ba8ca5c30d9ee7f6669f2 232 Pfam PF02254 TrkA-N domain 7 124 2.0E-15 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SMM_RS05140 6299fd9f825ba8ca5c30d9ee7f6669f2 232 SUPERFAMILY SSF116726 143 221 2.35E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SMM_RS00455 e2b3a9429b838545768e3f902bc1dff2 91 Gene3D G3DSA:2.60.15.10 4 84 1.2E-21 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00455 e2b3a9429b838545768e3f902bc1dff2 91 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 12 74 1.0E-7 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00455 e2b3a9429b838545768e3f902bc1dff2 91 SUPERFAMILY SSF51344 6 83 7.19E-20 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00455 e2b3a9429b838545768e3f902bc1dff2 91 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 83 3.9E-22 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00455 e2b3a9429b838545768e3f902bc1dff2 91 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 5 88 7.5E-20 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SMM_RS00555 2d2cdbca2dd410ac9d8fe3ea4231cb52 70 Gene3D G3DSA:1.10.10.10 4 64 2.4E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SMM_RS02690 dea1d6c36861dd1a87a0115840c2056a 49 PANTHER PTHR15238 1 49 1.3E-14 T 22-04-2016 SMM_RS02690 dea1d6c36861dd1a87a0115840c2056a 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 2.9E-17 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS02690 dea1d6c36861dd1a87a0115840c2056a 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 17.068 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS02690 dea1d6c36861dd1a87a0115840c2056a 49 SUPERFAMILY SSF57829 1 49 1.28E-15 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SMM_RS02690 dea1d6c36861dd1a87a0115840c2056a 49 PANTHER PTHR15238:SF3 1 49 1.3E-14 T 22-04-2016 SMM_RS02690 dea1d6c36861dd1a87a0115840c2056a 49 Pfam PF00471 Ribosomal protein L33 4 49 6.7E-18 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01375 5b1880042baf2468a4602b58d7788a73 145 Gene3D G3DSA:3.100.10.10 32 145 1.8E-31 T 22-04-2016 SMM_RS01375 5b1880042baf2468a4602b58d7788a73 145 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 6.5E-34 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SMM_RS01375 5b1880042baf2468a4602b58d7788a73 145 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 145 20.827 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SMM_RS01375 5b1880042baf2468a4602b58d7788a73 145 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.0E-50 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMM_RS01375 5b1880042baf2468a4602b58d7788a73 145 SUPERFAMILY SSF52080 4 143 9.16E-44 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P SMM_RS01375 5b1880042baf2468a4602b58d7788a73 145 PANTHER PTHR12934 1 145 8.8E-61 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SMM_RS01375 5b1880042baf2468a4602b58d7788a73 145 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS06100 0c78ad98547e1825f9a7db58fa8d9c6f 82 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 81 1.6E-12 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SMM_RS06100 0c78ad98547e1825f9a7db58fa8d9c6f 82 PANTHER PTHR22893 1 81 2.5E-17 T 22-04-2016 SMM_RS06100 0c78ad98547e1825f9a7db58fa8d9c6f 82 PANTHER PTHR22893:SF48 1 81 2.5E-17 T 22-04-2016 SMM_RS06100 0c78ad98547e1825f9a7db58fa8d9c6f 82 Gene3D G3DSA:3.20.20.70 1 81 1.0E-17 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMM_RS06100 0c78ad98547e1825f9a7db58fa8d9c6f 82 SUPERFAMILY SSF51395 1 81 3.26E-15 T 22-04-2016 SMM_RS01160 f377b03774b206831a1b0fcaf80286b4 107 PANTHER PTHR10724 2 71 6.6E-20 T 22-04-2016 SMM_RS01160 f377b03774b206831a1b0fcaf80286b4 107 SMART SM00316 3 73 5.0E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMM_RS01160 f377b03774b206831a1b0fcaf80286b4 107 SUPERFAMILY SSF50249 3 82 1.84E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMM_RS01160 f377b03774b206831a1b0fcaf80286b4 107 Pfam PF00575 S1 RNA binding domain 4 73 1.3E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 SMM_RS01160 f377b03774b206831a1b0fcaf80286b4 107 Gene3D G3DSA:2.40.50.140 2 74 1.4E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMM_RS00195 6eab57788ab9a2d04d9879ba792b702b 98 TIGRFAM TIGR00105 L31: ribosomal protein bL31 3 68 4.0E-25 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00195 6eab57788ab9a2d04d9879ba792b702b 98 SUPERFAMILY SSF143800 3 67 7.46E-22 T 22-04-2016 SMM_RS00195 6eab57788ab9a2d04d9879ba792b702b 98 ProSitePatterns PS01143 Ribosomal protein L31 signature. 37 58 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00195 6eab57788ab9a2d04d9879ba792b702b 98 Pfam PF01197 Ribosomal protein L31 3 67 2.5E-26 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00195 6eab57788ab9a2d04d9879ba792b702b 98 PRINTS PR01249 Ribosomal protein L31 signature 3 20 1.6E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00195 6eab57788ab9a2d04d9879ba792b702b 98 PRINTS PR01249 Ribosomal protein L31 signature 33 48 1.6E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00195 6eab57788ab9a2d04d9879ba792b702b 98 PRINTS PR01249 Ribosomal protein L31 signature 48 66 1.6E-16 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00195 6eab57788ab9a2d04d9879ba792b702b 98 PANTHER PTHR33280 3 96 6.3E-30 T 22-04-2016 SMM_RS00195 6eab57788ab9a2d04d9879ba792b702b 98 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 2 70 25.162 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS00195 6eab57788ab9a2d04d9879ba792b702b 98 PANTHER PTHR33280:SF2 3 96 6.3E-30 T 22-04-2016 SMM_RS04055 3e58559e144eef1f6dcb5798b8f1e2fe 139 SUPERFAMILY SSF53187 1 135 1.73E-24 T 22-04-2016 SMM_RS04055 3e58559e144eef1f6dcb5798b8f1e2fe 139 PANTHER PTHR11963:SF13 1 134 2.4E-25 T 22-04-2016 SMM_RS04055 3e58559e144eef1f6dcb5798b8f1e2fe 139 PANTHER PTHR11963 1 134 2.4E-25 T 22-04-2016 SMM_RS04055 3e58559e144eef1f6dcb5798b8f1e2fe 139 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 1 127 1.2E-25 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SMM_RS04055 3e58559e144eef1f6dcb5798b8f1e2fe 139 Gene3D G3DSA:3.40.630.10 1 135 2.0E-27 T 22-04-2016 SMM_RS01395 19b837cfa90998d42e990e78a29649d8 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01395 19b837cfa90998d42e990e78a29649d8 37 SUPERFAMILY SSF57840 1 37 7.19E-16 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01395 19b837cfa90998d42e990e78a29649d8 37 Pfam PF00444 Ribosomal protein L36 1 37 1.7E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01395 19b837cfa90998d42e990e78a29649d8 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 4.0E-8 T 22-04-2016 SMM_RS01395 19b837cfa90998d42e990e78a29649d8 37 PANTHER PTHR18804 1 37 2.9E-15 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01395 19b837cfa90998d42e990e78a29649d8 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 1.9E-19 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01395 19b837cfa90998d42e990e78a29649d8 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.829 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01270 314982b2e9e5be5f2addbf71a5d8b15f 155 SUPERFAMILY SSF75217 2 153 4.4E-38 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SMM_RS01270 314982b2e9e5be5f2addbf71a5d8b15f 155 PANTHER PTHR33603:SF1 3 155 2.1E-38 T 22-04-2016 SMM_RS01270 314982b2e9e5be5f2addbf71a5d8b15f 155 PANTHER PTHR33603 3 155 2.1E-38 T 22-04-2016 SMM_RS01270 314982b2e9e5be5f2addbf71a5d8b15f 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 24.137 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMM_RS01270 314982b2e9e5be5f2addbf71a5d8b15f 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 154 4.1E-43 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMM_RS01270 314982b2e9e5be5f2addbf71a5d8b15f 155 Gene3D G3DSA:3.40.1280.10 2 155 1.2E-42 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMM_RS01270 314982b2e9e5be5f2addbf71a5d8b15f 155 PIRSF PIRSF004505 1 155 5.1E-44 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SMM_RS01310 d27e642ed15b32898537e4fd44a80276 112 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01310 d27e642ed15b32898537e4fd44a80276 112 SUPERFAMILY SSF54843 2 110 7.59E-44 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMM_RS01310 d27e642ed15b32898537e4fd44a80276 112 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 5.4E-42 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMM_RS01310 d27e642ed15b32898537e4fd44a80276 112 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.51 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMM_RS01310 d27e642ed15b32898537e4fd44a80276 112 PANTHER PTHR13501 3 110 6.0E-48 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SMM_RS01310 d27e642ed15b32898537e4fd44a80276 112 Gene3D G3DSA:3.90.470.10 1 110 3.0E-42 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMM_RS01310 d27e642ed15b32898537e4fd44a80276 112 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 2.7E-34 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SMM_RS00550 2b68090f3ea7f04d9cf1f449aaa466d5 312 Gene3D G3DSA:3.40.50.1820 60 309 1.4E-12 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMM_RS00550 2b68090f3ea7f04d9cf1f449aaa466d5 312 SUPERFAMILY SSF53474 71 311 2.88E-9 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold SMM_RS03455 a97a4a576aff65c2c1483034542a86f8 77 Gene3D G3DSA:3.40.50.10260 13 63 1.5E-5 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SMM_RS03455 a97a4a576aff65c2c1483034542a86f8 77 SUPERFAMILY SSF64153 4 62 1.44E-6 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 SMM_RS01280 e17572204767ca49249dce5e83f4d97a 101 PANTHER PTHR11700 1 101 8.9E-38 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMM_RS01280 e17572204767ca49249dce5e83f4d97a 101 SUPERFAMILY SSF54999 6 101 1.31E-32 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SMM_RS01280 e17572204767ca49249dce5e83f4d97a 101 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 5 101 3.5E-40 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMM_RS01280 e17572204767ca49249dce5e83f4d97a 101 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 2.0E-16 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMM_RS01280 e17572204767ca49249dce5e83f4d97a 101 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 2.0E-16 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMM_RS01280 e17572204767ca49249dce5e83f4d97a 101 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 2.0E-16 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMM_RS01280 e17572204767ca49249dce5e83f4d97a 101 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 101 22.456 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SMM_RS01280 e17572204767ca49249dce5e83f4d97a 101 SMART SM01403 7 101 3.3E-49 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SMM_RS01280 e17572204767ca49249dce5e83f4d97a 101 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.0E-32 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SMM_RS01280 e17572204767ca49249dce5e83f4d97a 101 Gene3D G3DSA:3.30.70.600 5 101 2.1E-37 T 22-04-2016 IPR027486 Ribosomal protein S10 domain SMM_RS02325 2d43c32858485115836a5b2f335f9e31 166 PANTHER PTHR10681:SF81 27 166 7.4E-23 T 22-04-2016 SMM_RS02325 2d43c32858485115836a5b2f335f9e31 166 PANTHER PTHR10681 27 166 7.4E-23 T 22-04-2016 SMM_RS02325 2d43c32858485115836a5b2f335f9e31 166 SUPERFAMILY SSF52833 9 159 1.66E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold SMM_RS02325 2d43c32858485115836a5b2f335f9e31 166 Gene3D G3DSA:3.40.30.10 14 166 1.2E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold SMM_RS02325 2d43c32858485115836a5b2f335f9e31 166 Pfam PF08534 Redoxin 21 158 8.9E-12 T 22-04-2016 IPR013740 Redoxin GO:0016491 SMM_RS04545 446365e8bb04b6f99b15d7008669c662 109 Pfam PF03780 Asp23 family, cell envelope-related function 6 105 1.5E-8 T 22-04-2016 IPR005531 Alkaline shock protein Asp23 SMM_RS03380 8f46bfee72d8ad41e0646e53baf129fb 139 Pfam PF04472 Protein of unknown function (DUF552) 76 133 2.2E-11 T 22-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 SMM_RS04010 ea6e2a6a3105f9ee7f0ceaac5fa22bd9 263 Gene3D G3DSA:3.30.1330.30 6 97 7.0E-17 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SMM_RS04010 ea6e2a6a3105f9ee7f0ceaac5fa22bd9 263 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 33 97 4.9E-5 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMM_RS04010 ea6e2a6a3105f9ee7f0ceaac5fa22bd9 263 SUPERFAMILY SSF55315 5 97 3.06E-15 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like SMM_RS04010 ea6e2a6a3105f9ee7f0ceaac5fa22bd9 263 Gene3D G3DSA:3.40.1280.10 109 261 1.3E-38 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMM_RS04010 ea6e2a6a3105f9ee7f0ceaac5fa22bd9 263 SUPERFAMILY SSF75217 88 260 7.85E-38 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SMM_RS04010 ea6e2a6a3105f9ee7f0ceaac5fa22bd9 263 SMART SM00967 33 100 1.2E-6 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SMM_RS04010 ea6e2a6a3105f9ee7f0ceaac5fa22bd9 263 PANTHER PTHR12029 3 260 9.6E-48 T 22-04-2016 SMM_RS04010 ea6e2a6a3105f9ee7f0ceaac5fa22bd9 263 Pfam PF00588 SpoU rRNA Methylase family 111 254 5.0E-32 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SMM_RS06040 19888515ecaa37dfab355aba9facb674 91 SUPERFAMILY SSF56672 7 83 1.51E-23 T 22-04-2016 SMM_RS06040 19888515ecaa37dfab355aba9facb674 91 Pfam PF00817 impB/mucB/samB family 8 81 1.4E-22 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SMM_RS06040 19888515ecaa37dfab355aba9facb674 91 PANTHER PTHR11076 1 81 1.7E-19 T 22-04-2016 SMM_RS06040 19888515ecaa37dfab355aba9facb674 91 Gene3D G3DSA:3.30.70.270 35 83 8.9E-8 T 22-04-2016 SMM_RS04600 9a532b36c0d1d40f36bb8178a1570276 336 PANTHER PTHR24362 1 281 8.5E-84 T 22-04-2016 SMM_RS04600 9a532b36c0d1d40f36bb8178a1570276 336 Gene3D G3DSA:3.30.200.20 5 79 3.0E-20 T 22-04-2016 SMM_RS04600 9a532b36c0d1d40f36bb8178a1570276 336 Gene3D G3DSA:1.10.510.10 80 267 7.5E-51 T 22-04-2016 SMM_RS04600 9a532b36c0d1d40f36bb8178a1570276 336 SMART SM00220 14 271 8.6E-58 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SMM_RS04600 9a532b36c0d1d40f36bb8178a1570276 336 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 133 145 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SMM_RS04600 9a532b36c0d1d40f36bb8178a1570276 336 SUPERFAMILY SSF56112 5 290 8.36E-74 T 22-04-2016 IPR011009 Protein kinase-like domain SMM_RS04600 9a532b36c0d1d40f36bb8178a1570276 336 PANTHER PTHR24362:SF160 1 281 8.5E-84 T 22-04-2016 SMM_RS04600 9a532b36c0d1d40f36bb8178a1570276 336 Pfam PF00069 Protein kinase domain 14 264 4.7E-51 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SMM_RS02745 2f249317e43c8c55fbf45f421e98cecc 190 ProDom PD007643 SPIRALIN PRECURSOR SIGNAL MEMBRANE PALMITATE LIPOPROTEIN 5 158 0.002 T 22-04-2016 IPR007880 Spiralin GO:0016020 SMM_RS02745 2f249317e43c8c55fbf45f421e98cecc 190 Pfam PF05215 Spiralin 77 141 9.8E-5 T 22-04-2016 IPR007880 Spiralin GO:0016020 SMM_RS02045 a433a9ed2fa7865e353e618860b23811 256 Hamap MF_01805 Segregation and condensation protein A [scpA]. 7 248 20.263 T 22-04-2016 IPR003768 Segregation and condensation protein A SMM_RS02045 a433a9ed2fa7865e353e618860b23811 256 Pfam PF02616 Segregation and condensation protein ScpA 24 246 7.8E-34 T 22-04-2016 IPR003768 Segregation and condensation protein A SMM_RS02045 a433a9ed2fa7865e353e618860b23811 256 PANTHER PTHR33969 7 244 6.2E-43 T 22-04-2016 SMM_RS02045 a433a9ed2fa7865e353e618860b23811 256 PANTHER PTHR33969:SF2 7 244 6.2E-43 T 22-04-2016 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 PANTHER PTHR19375 14 326 3.6E-93 T 22-04-2016 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 Gene3D G3DSA:3.30.420.40 14 160 1.3E-25 T 22-04-2016 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 Gene3D G3DSA:3.90.640.10 188 258 8.9E-24 T 22-04-2016 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 PANTHER PTHR19375:SF117 14 326 3.6E-93 T 22-04-2016 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 Gene3D G3DSA:3.30.420.40 161 187 7.6E-28 T 22-04-2016 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 Gene3D G3DSA:3.30.420.40 264 318 7.6E-28 T 22-04-2016 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 Pfam PF06723 MreB/Mbl protein 14 335 4.6E-129 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 133 152 2.9E-27 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 50 68 2.9E-27 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 70 93 2.9E-27 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 301 327 2.9E-27 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 188 208 2.9E-27 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 SUPERFAMILY SSF53067 151 328 1.3E-39 T 22-04-2016 SMM_RS05710 19ac19fee9a61823f33a8658fea1b088 349 SUPERFAMILY SSF53067 14 149 2.2E-25 T 22-04-2016 SMM_RS04310 77a1f8a88a30f614e2cdfbea6d9c0c96 108 Gene3D G3DSA:1.20.5.110 26 84 3.4E-4 T 22-04-2016 SMM_RS04310 77a1f8a88a30f614e2cdfbea6d9c0c96 108 Pfam PF05103 DivIVA protein 7 96 3.2E-13 T 22-04-2016 IPR007793 DivIVA family SMM_RS04310 77a1f8a88a30f614e2cdfbea6d9c0c96 108 PIRSF PIRSF029938 1 107 1.3E-18 T 22-04-2016 IPR011229 Cell cycle protein GpsB SMM_RS04310 77a1f8a88a30f614e2cdfbea6d9c0c96 108 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 39 4.1E-11 T 22-04-2016 IPR019933 DivIVA domain SMM_RS04310 77a1f8a88a30f614e2cdfbea6d9c0c96 108 PANTHER PTHR35794 1 105 1.7E-13 T 22-04-2016 SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 Pfam PF13393 Histidyl-tRNA synthetase 8 309 2.8E-41 T 22-04-2016 SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 PIRSF PIRSF001549 1 418 8.7E-107 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 PANTHER PTHR11476:SF9 1 414 5.1E-150 T 22-04-2016 SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 416 28.951 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 Gene3D G3DSA:3.40.50.800 324 414 8.0E-21 T 22-04-2016 IPR004154 Anticodon-binding SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 406 6.7E-128 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 SUPERFAMILY SSF52954 326 415 3.47E-20 T 22-04-2016 IPR004154 Anticodon-binding SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 Pfam PF03129 Anticodon binding domain 327 414 4.7E-13 T 22-04-2016 IPR004154 Anticodon-binding SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 SUPERFAMILY SSF55681 3 317 1.9E-77 T 22-04-2016 SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 Gene3D G3DSA:3.30.930.10 2 184 1.0E-79 T 22-04-2016 SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 Gene3D G3DSA:3.30.930.10 216 319 1.0E-79 T 22-04-2016 SMM_RS02610 18e9dd4b79e5c34653e8a323304fe28e 418 PANTHER PTHR11476 1 414 5.1E-150 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SMM_RS03915 78c9a6d80cc82b7d6d47c52e0eb6f63b 180 Gene3D G3DSA:3.20.20.370 32 168 9.6E-10 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SMM_RS03915 78c9a6d80cc82b7d6d47c52e0eb6f63b 180 SUPERFAMILY SSF88713 10 171 3.18E-11 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SMM_RS04755 1eda814f64497cbcafa050001527a0a2 243 PANTHER PTHR32125:SF1 7 96 4.4E-99 T 22-04-2016 SMM_RS04755 1eda814f64497cbcafa050001527a0a2 243 PANTHER PTHR32125:SF1 112 226 4.4E-99 T 22-04-2016 SMM_RS04755 1eda814f64497cbcafa050001527a0a2 243 Gene3D G3DSA:1.10.1270.20 160 241 1.9E-34 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMM_RS04755 1eda814f64497cbcafa050001527a0a2 243 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 25 219 1.7E-60 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMM_RS04755 1eda814f64497cbcafa050001527a0a2 243 SUPERFAMILY SSF75217 5 241 1.68E-89 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases SMM_RS04755 1eda814f64497cbcafa050001527a0a2 243 Gene3D G3DSA:3.40.1280.10 4 159 3.1E-56 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SMM_RS04755 1eda814f64497cbcafa050001527a0a2 243 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 5 232 2.8E-90 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMM_RS04755 1eda814f64497cbcafa050001527a0a2 243 PANTHER PTHR32125 7 96 4.4E-99 T 22-04-2016 SMM_RS04755 1eda814f64497cbcafa050001527a0a2 243 PANTHER PTHR32125 112 226 4.4E-99 T 22-04-2016 SMM_RS04755 1eda814f64497cbcafa050001527a0a2 243 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 243 92.109 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMM_RS04755 1eda814f64497cbcafa050001527a0a2 243 PIRSF PIRSF000386 3 243 4.1E-95 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SMM_RS00400 16a206f618644b9e013709677fcb9057 110 PANTHER PTHR34382 1 109 5.3E-28 T 22-04-2016 SMM_RS00400 16a206f618644b9e013709677fcb9057 110 PIRSF PIRSF000699 1 107 2.0E-28 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMM_RS00400 16a206f618644b9e013709677fcb9057 110 SUPERFAMILY SSF46973 1 102 1.05E-28 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMM_RS00400 16a206f618644b9e013709677fcb9057 110 Gene3D G3DSA:1.20.58.80 4 103 7.8E-30 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMM_RS00400 16a206f618644b9e013709677fcb9057 110 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 8 101 6.9E-29 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SMM_RS01295 38ffab6b7fb1f8478236f4eb44b515f2 95 PANTHER PTHR11620 5 90 5.9E-24 T 22-04-2016 SMM_RS01295 38ffab6b7fb1f8478236f4eb44b515f2 95 Pfam PF00276 Ribosomal protein L23 5 89 1.7E-30 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SMM_RS01295 38ffab6b7fb1f8478236f4eb44b515f2 95 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site SMM_RS01295 38ffab6b7fb1f8478236f4eb44b515f2 95 SUPERFAMILY SSF54189 1 92 1.08E-29 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01295 38ffab6b7fb1f8478236f4eb44b515f2 95 Gene3D G3DSA:3.30.70.330 2 92 7.2E-33 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SMM_RS01295 38ffab6b7fb1f8478236f4eb44b515f2 95 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 93 20.673 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SMM_RS05690 c9e7b3294642cf6d913bfc0b8cb3c69c 128 Gene3D G3DSA:1.10.10.60 76 114 1.2E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 SMM_RS05690 c9e7b3294642cf6d913bfc0b8cb3c69c 128 SUPERFAMILY SSF57884 17 72 4.84E-13 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SMM_RS05690 c9e7b3294642cf6d913bfc0b8cb3c69c 128 Pfam PF02805 Metal binding domain of Ada 17 66 8.4E-14 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SMM_RS05690 c9e7b3294642cf6d913bfc0b8cb3c69c 128 Gene3D G3DSA:3.40.10.10 8 72 1.5E-14 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 SMM_RS04765 9e28c5cf6703a2922541bed19ebf4b8f 83 Gene3D G3DSA:3.30.300.120 36 68 7.5E-4 T 22-04-2016 SMM_RS04765 9e28c5cf6703a2922541bed19ebf4b8f 83 SUPERFAMILY SSF54814 34 69 5.3E-5 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SMM_RS00745 70620b323372b4162c1139909d52a762 334 PIRSF PIRSF002465 1 334 2.4E-116 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SMM_RS00745 70620b323372b4162c1139909d52a762 334 Gene3D G3DSA:3.40.718.10 2 332 6.9E-115 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SMM_RS00745 70620b323372b4162c1139909d52a762 334 PANTHER PTHR30100:SF1 1 331 3.6E-107 T 22-04-2016 SMM_RS00745 70620b323372b4162c1139909d52a762 334 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 334 119.988 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SMM_RS00745 70620b323372b4162c1139909d52a762 334 SUPERFAMILY SSF53659 1 332 1.07E-91 T 22-04-2016 SMM_RS00745 70620b323372b4162c1139909d52a762 334 PANTHER PTHR30100 1 331 3.6E-107 T 22-04-2016 SMM_RS00745 70620b323372b4162c1139909d52a762 334 Pfam PF02504 Fatty acid synthesis protein 3 324 5.0E-96 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 SMM_RS00745 70620b323372b4162c1139909d52a762 334 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 332 3.3E-106 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SMM_RS00485 3d4505611a400ea0aacaca96e3a3d5ec 98 ProDom PD350688 MEMBRANE SECG PROTEIN-EXPORT TRANSMEMBRANE PROBABLE TRANSLOCATION UNIQUE PREDICTED 24 76 0.001 T 22-04-2016 SMM_RS00485 3d4505611a400ea0aacaca96e3a3d5ec 98 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 22 94 4.0E-12 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMM_RS00485 3d4505611a400ea0aacaca96e3a3d5ec 98 Pfam PF03840 Preprotein translocase SecG subunit 23 92 5.8E-9 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SMM_RS05875 982bef93cf64c753fc0f2e815c9c14a3 73 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 2 57 1.1E-9 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SMM_RS05875 982bef93cf64c753fc0f2e815c9c14a3 73 Gene3D G3DSA:3.20.70.20 4 56 3.0E-4 T 22-04-2016 SMM_RS05975 b73d75c38e8d8cbcf4be6116f383f228 121 PANTHER PTHR30505 10 120 2.3E-12 T 22-04-2016 SMM_RS05975 b73d75c38e8d8cbcf4be6116f383f228 121 PANTHER PTHR30505:SF0 10 120 2.3E-12 T 22-04-2016 SMM_RS02030 f9ca8e522e32890ed0f22cd24ca0b4d9 160 PRINTS PR00070 Dihydrofolate reductase signature 95 109 3.0E-11 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMM_RS02030 f9ca8e522e32890ed0f22cd24ca0b4d9 160 PRINTS PR00070 Dihydrofolate reductase signature 40 51 3.0E-11 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMM_RS02030 f9ca8e522e32890ed0f22cd24ca0b4d9 160 PRINTS PR00070 Dihydrofolate reductase signature 13 23 3.0E-11 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMM_RS02030 f9ca8e522e32890ed0f22cd24ca0b4d9 160 PRINTS PR00070 Dihydrofolate reductase signature 27 35 3.0E-11 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMM_RS02030 f9ca8e522e32890ed0f22cd24ca0b4d9 160 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMM_RS02030 f9ca8e522e32890ed0f22cd24ca0b4d9 160 Pfam PF00186 Dihydrofolate reductase 1 148 5.1E-47 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMM_RS02030 f9ca8e522e32890ed0f22cd24ca0b4d9 160 PANTHER PTHR22778:SF16 1 145 2.0E-25 T 22-04-2016 SMM_RS02030 f9ca8e522e32890ed0f22cd24ca0b4d9 160 SUPERFAMILY SSF53597 1 157 3.8E-48 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SMM_RS02030 f9ca8e522e32890ed0f22cd24ca0b4d9 160 PANTHER PTHR22778 1 145 2.0E-25 T 22-04-2016 SMM_RS02030 f9ca8e522e32890ed0f22cd24ca0b4d9 160 Gene3D G3DSA:3.40.430.10 1 156 2.7E-45 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain SMM_RS02030 f9ca8e522e32890ed0f22cd24ca0b4d9 160 PIRSF PIRSF000194 1 159 2.4E-45 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 PANTHER PTHR21342 1 138 2.4E-33 T 22-04-2016 SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 Gene3D G3DSA:3.40.50.620 1 137 1.9E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 139 5.1E-42 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.2E-26 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.2E-26 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 1 19 1.2E-26 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 19 40 1.2E-26 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 PANTHER PTHR21342:SF1 1 138 2.4E-33 T 22-04-2016 SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 140 20.932 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 Pfam PF01467 Cytidylyltransferase-like 4 134 2.3E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 SUPERFAMILY SSF52374 2 137 2.95E-29 T 22-04-2016 SMM_RS01170 089adb5fb4031d009b7884c390aca350 140 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 58 7.3E-14 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SMM_RS02950 2530595d916787c159cfb61d1b516b0b 117 SUPERFAMILY SSF56784 4 72 6.47E-11 T 22-04-2016 IPR023214 HAD-like domain SMM_RS02950 2530595d916787c159cfb61d1b516b0b 117 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 72 2.2E-8 T 22-04-2016 IPR023214 HAD-like domain SMM_RS02950 2530595d916787c159cfb61d1b516b0b 117 Gene3D G3DSA:3.40.50.1000 9 83 4.5E-10 T 22-04-2016 IPR023214 HAD-like domain SMM_RS03680 b72fef9ea4203a6e5fc0576d9b0e423d 54 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 49 8.5E-11 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMM_RS03680 b72fef9ea4203a6e5fc0576d9b0e423d 54 Pfam PF01165 Ribosomal protein S21 3 51 3.2E-6 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMM_RS03680 b72fef9ea4203a6e5fc0576d9b0e423d 54 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 54 13.962 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SMM_RS01390 33e1c1d22eafec959a2dbe757e0e0c49 72 Pfam PF01176 Translation initiation factor 1A / IF-1 9 70 8.8E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SMM_RS01390 33e1c1d22eafec959a2dbe757e0e0c49 72 SUPERFAMILY SSF50249 1 71 1.15E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMM_RS01390 33e1c1d22eafec959a2dbe757e0e0c49 72 Gene3D G3DSA:2.40.50.140 1 72 2.8E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold SMM_RS01390 33e1c1d22eafec959a2dbe757e0e0c49 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 2.9E-36 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SMM_RS01390 33e1c1d22eafec959a2dbe757e0e0c49 72 PANTHER PTHR33370 1 72 2.0E-43 T 22-04-2016 SMM_RS01390 33e1c1d22eafec959a2dbe757e0e0c49 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.8 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SMM_RS01390 33e1c1d22eafec959a2dbe757e0e0c49 72 SMART SM00316 4 72 6.0E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 SMM_RS00495 9416c455ab59c7ebbb90f34887310ee7 142 PANTHER PTHR30308:SF2 1 142 1.9E-62 T 22-04-2016 SMM_RS00495 9416c455ab59c7ebbb90f34887310ee7 142 Hamap MF_00023 SsrA-binding protein [smpB]. 1 142 60.542 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMM_RS00495 9416c455ab59c7ebbb90f34887310ee7 142 PANTHER PTHR30308 1 142 1.9E-62 T 22-04-2016 SMM_RS00495 9416c455ab59c7ebbb90f34887310ee7 142 Pfam PF01668 SmpB protein 3 65 1.4E-27 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMM_RS00495 9416c455ab59c7ebbb90f34887310ee7 142 ProSitePatterns PS01317 SsrA-binding protein. 22 34 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site SMM_RS00495 9416c455ab59c7ebbb90f34887310ee7 142 SUPERFAMILY SSF74982 2 127 3.53E-46 T 22-04-2016 IPR023620 Small protein B SMM_RS00495 9416c455ab59c7ebbb90f34887310ee7 142 Gene3D G3DSA:2.40.280.10 2 122 2.6E-45 T 22-04-2016 IPR023620 Small protein B SMM_RS00495 9416c455ab59c7ebbb90f34887310ee7 142 TIGRFAM TIGR00086 smpB: SsrA-binding protein 4 139 7.2E-54 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMM_RS00495 9416c455ab59c7ebbb90f34887310ee7 142 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 4 127 4.0E-34 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 SMM_RS01400 368ae25c2ec0275c778bf3e019b91d97 121 PANTHER PTHR10871 1 121 1.6E-68 T 22-04-2016 SMM_RS01400 368ae25c2ec0275c778bf3e019b91d97 121 Gene3D G3DSA:4.10.910.10 72 121 7.2E-26 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal SMM_RS01400 368ae25c2ec0275c778bf3e019b91d97 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 26.74 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01400 368ae25c2ec0275c778bf3e019b91d97 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.4E-50 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01400 368ae25c2ec0275c778bf3e019b91d97 121 PIRSF PIRSF002134 1 121 1.7E-40 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01400 368ae25c2ec0275c778bf3e019b91d97 121 SUPERFAMILY SSF46946 2 120 4.32E-43 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SMM_RS01400 368ae25c2ec0275c778bf3e019b91d97 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.2E-31 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SMM_RS01400 368ae25c2ec0275c778bf3e019b91d97 121 Gene3D G3DSA:1.10.8.50 1 71 2.3E-31 T 22-04-2016 SMM_RS05895 d42b384a4f98ec16bd6749fe6d3d9642 101 Gene3D G3DSA:3.40.109.10 2 71 2.4E-8 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMM_RS05895 d42b384a4f98ec16bd6749fe6d3d9642 101 SUPERFAMILY SSF55469 2 59 2.09E-9 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 SMM_RS04355 cb829fea9ff014b5dddd6260f76d319c 191 Gene3D G3DSA:3.40.50.300 1 189 4.8E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS04355 cb829fea9ff014b5dddd6260f76d319c 191 SUPERFAMILY SSF52540 1 189 3.53E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS04355 cb829fea9ff014b5dddd6260f76d319c 191 Pfam PF01121 Dephospho-CoA kinase 1 155 1.9E-22 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SMM_RS04355 cb829fea9ff014b5dddd6260f76d319c 191 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 2 162 3.8E-27 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SMM_RS00435 297f400a92b2ea530ae17ac1f0d3a54a 181 SUPERFAMILY SSF47928 8 107 3.79E-13 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SMM_RS00435 297f400a92b2ea530ae17ac1f0d3a54a 181 Gene3D G3DSA:1.10.520.20 9 106 4.2E-9 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SMM_RS00435 297f400a92b2ea530ae17ac1f0d3a54a 181 PRINTS PR00125 ATP synthase delta subunit signature 7 26 1.7E-15 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMM_RS00435 297f400a92b2ea530ae17ac1f0d3a54a 181 PRINTS PR00125 ATP synthase delta subunit signature 137 152 1.7E-15 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMM_RS00435 297f400a92b2ea530ae17ac1f0d3a54a 181 PRINTS PR00125 ATP synthase delta subunit signature 152 170 1.7E-15 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMM_RS00435 297f400a92b2ea530ae17ac1f0d3a54a 181 PRINTS PR00125 ATP synthase delta subunit signature 76 87 1.7E-15 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMM_RS00435 297f400a92b2ea530ae17ac1f0d3a54a 181 PANTHER PTHR11910 11 175 2.3E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMM_RS00435 297f400a92b2ea530ae17ac1f0d3a54a 181 Pfam PF00213 ATP synthase delta (OSCP) subunit 10 176 1.1E-36 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMM_RS00435 297f400a92b2ea530ae17ac1f0d3a54a 181 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 10 175 2.6E-32 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMM_RS00435 297f400a92b2ea530ae17ac1f0d3a54a 181 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 179 16.374 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 19 238 4.2E-69 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 Gene3D G3DSA:1.10.1520.10 15 156 3.3E-41 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 Gene3D G3DSA:3.30.160.20 169 238 9.1E-17 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 Hamap MF_00104 Ribonuclease 3 [rnc]. 18 235 27.546 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 SMART SM00358 170 239 3.8E-13 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 Pfam PF14622 Ribonuclease-III-like 31 155 5.0E-31 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 PANTHER PTHR11207 23 239 2.1E-54 T 22-04-2016 SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 Pfam PF00035 Double-stranded RNA binding motif 170 238 1.7E-10 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 SUPERFAMILY SSF54768 124 238 1.01E-15 T 22-04-2016 SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 ProSitePatterns PS00517 Ribonuclease III family signature. 52 60 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 SMART SM00535 30 161 1.6E-46 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMM_RS00750 3e50505d2b58adccade6d9e808b5f73b 244 SUPERFAMILY SSF69065 14 172 1.5E-43 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SMM_RS04160 a57e4e5ebe3b510b38171c5a5f1b0082 142 PANTHER PTHR23091 1 139 3.3E-13 T 22-04-2016 SMM_RS04160 a57e4e5ebe3b510b38171c5a5f1b0082 142 Pfam PF13673 Acetyltransferase (GNAT) domain 20 124 7.1E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 SMM_RS04160 a57e4e5ebe3b510b38171c5a5f1b0082 142 SUPERFAMILY SSF55729 1 133 7.33E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMM_RS04160 a57e4e5ebe3b510b38171c5a5f1b0082 142 Gene3D G3DSA:3.40.630.30 2 132 6.1E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase SMM_RS03620 e7151d1d11c222840b0e31ad4c7fa6bb 160 SUPERFAMILY SSF52540 3 138 3.26E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS03620 e7151d1d11c222840b0e31ad4c7fa6bb 160 PANTHER PTHR24220:SF580 4 146 1.1E-27 T 22-04-2016 SMM_RS03620 e7151d1d11c222840b0e31ad4c7fa6bb 160 Gene3D G3DSA:3.40.50.300 3 146 2.0E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS03620 e7151d1d11c222840b0e31ad4c7fa6bb 160 Pfam PF00005 ABC transporter 4 87 2.6E-9 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SMM_RS03620 e7151d1d11c222840b0e31ad4c7fa6bb 160 PANTHER PTHR24220 4 146 1.1E-27 T 22-04-2016 SMM_RS03190 a9f919f9075124b184566e5be47b2814 59 Gene3D G3DSA:3.40.50.1110 1 56 1.5E-6 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain SMM_RS04195 bc855f64d24f95bfb5228a241de80770 151 Gene3D G3DSA:3.40.420.10 15 127 8.2E-6 T 22-04-2016 IPR016138 Ribosome-inactivating protein, subdomain 1 GO:0017148|GO:0030598 SMM_RS04195 bc855f64d24f95bfb5228a241de80770 151 SUPERFAMILY SSF56371 70 128 2.36E-6 T 22-04-2016 IPR001574 Ribosome-inactivating protein GO:0017148|GO:0030598 SMM_RS04735 80ab62aecad6d1bff2e4cdea7df520bd 201 Pfam PF01351 Ribonuclease HII 20 193 6.6E-34 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain SMM_RS04735 80ab62aecad6d1bff2e4cdea7df520bd 201 Gene3D G3DSA:3.30.420.10 19 156 1.8E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMM_RS04735 80ab62aecad6d1bff2e4cdea7df520bd 201 PANTHER PTHR10954:SF10 20 201 2.7E-56 T 22-04-2016 SMM_RS04735 80ab62aecad6d1bff2e4cdea7df520bd 201 Hamap MF_00052_B Ribonuclease HII [rnhB]. 17 195 31.352 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 SMM_RS04735 80ab62aecad6d1bff2e4cdea7df520bd 201 SUPERFAMILY SSF53098 12 200 1.82E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SMM_RS04735 80ab62aecad6d1bff2e4cdea7df520bd 201 PANTHER PTHR10954 20 201 2.7E-56 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SMM_RS02440 985b61ed8225718d9fa6dfe3b5a9a4fb 126 Gene3D G3DSA:1.10.940.10 1 126 2.3E-19 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMM_RS02440 985b61ed8225718d9fa6dfe3b5a9a4fb 126 Pfam PF01029 NusB family 13 126 9.5E-15 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMM_RS02440 985b61ed8225718d9fa6dfe3b5a9a4fb 126 SUPERFAMILY SSF48013 2 125 7.59E-19 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SMM_RS01750 1af5812217bee8c43f264bef513a7258 124 Gene3D G3DSA:3.20.20.70 1 119 2.6E-6 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMM_RS01750 1af5812217bee8c43f264bef513a7258 124 SUPERFAMILY SSF51445 1 99 8.0E-5 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily SMM_RS01750 1af5812217bee8c43f264bef513a7258 124 Pfam PF05913 Bacterial protein of unknown function (DUF871) 1 99 1.1E-7 T 22-04-2016 IPR008589 Protein of unknown function DUF871, prokaryotic SMM_RS05330 908a3b4b66a46aa8d284a2afe2ba6e4b 277 SUPERFAMILY SSF101960 62 275 8.37E-39 T 22-04-2016 SMM_RS05330 908a3b4b66a46aa8d284a2afe2ba6e4b 277 Pfam PF01458 Uncharacterized protein family (UPF0051) 36 250 1.8E-38 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SMM_RS05330 908a3b4b66a46aa8d284a2afe2ba6e4b 277 PANTHER PTHR30508:SF0 146 275 2.2E-29 T 22-04-2016 SMM_RS05330 908a3b4b66a46aa8d284a2afe2ba6e4b 277 PANTHER PTHR30508 146 275 2.2E-29 T 22-04-2016 SMM_RS05815 3bbd744ef15fd392cbc90ff20cacd0c7 99 SUPERFAMILY SSF51905 13 97 2.12E-14 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMM_RS05815 3bbd744ef15fd392cbc90ff20cacd0c7 99 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 16 34 5.9E-5 T 22-04-2016 SMM_RS05815 3bbd744ef15fd392cbc90ff20cacd0c7 99 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 62 80 5.9E-5 T 22-04-2016 SMM_RS05815 3bbd744ef15fd392cbc90ff20cacd0c7 99 Gene3D G3DSA:3.50.50.60 12 97 2.9E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMM_RS05815 3bbd744ef15fd392cbc90ff20cacd0c7 99 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 97 4.3E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SMM_RS06155 ab7fab650a646570a931f4bb2be428bf 75 PANTHER PTHR32502:SF3 2 74 4.5E-18 T 22-04-2016 SMM_RS06155 ab7fab650a646570a931f4bb2be428bf 75 SUPERFAMILY SSF53697 1 70 4.45E-9 T 22-04-2016 SMM_RS06155 ab7fab650a646570a931f4bb2be428bf 75 Gene3D G3DSA:3.40.50.10490 1 72 4.6E-21 T 22-04-2016 SMM_RS06155 ab7fab650a646570a931f4bb2be428bf 75 PANTHER PTHR32502 2 74 4.5E-18 T 22-04-2016 SMM_RS05805 2de6a09c32b5af42c381e63366f6b465 91 SUPERFAMILY SSF51395 1 87 6.59E-12 T 22-04-2016 SMM_RS05805 2de6a09c32b5af42c381e63366f6b465 91 Gene3D G3DSA:3.20.20.70 2 79 5.5E-12 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMM_RS05805 2de6a09c32b5af42c381e63366f6b465 91 Pfam PF01207 Dihydrouridine synthase (Dus) 3 86 4.6E-11 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SMM_RS01240 3c8d42d606df144d3620683e959628d1 75 SUPERFAMILY SSF50037 6 72 4.58E-10 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal SMM_RS01240 3c8d42d606df144d3620683e959628d1 75 Pfam PF04023 FeoA domain 8 71 7.0E-8 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SMM_RS01240 3c8d42d606df144d3620683e959628d1 75 Gene3D G3DSA:2.30.30.90 8 71 1.8E-4 T 22-04-2016 SMM_RS00085 3a425693041b312478b00b87705ef12b 91 SUPERFAMILY SSF55031 4 76 6.17E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SMM_RS00085 3a425693041b312478b00b87705ef12b 91 Gene3D G3DSA:3.30.70.360 8 75 2.1E-13 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain SMM_RS06125 e1109b056116f8c4d5f95614bd72ed66 121 Pfam PF06044 Dam-replacing family 47 117 3.6E-15 T 22-04-2016 IPR010324 Dam-replacing SMM_RS00090 15005d00e4bb7f0843b1c7992e8432e7 72 SUPERFAMILY SSF53187 2 71 1.73E-7 T 22-04-2016 SMM_RS00090 15005d00e4bb7f0843b1c7992e8432e7 72 Gene3D G3DSA:3.40.630.10 2 71 1.0E-8 T 22-04-2016 SMM_RS05080 74f0f0b82042e8a63778f727f2fad46c 74 Gene3D G3DSA:1.10.1200.10 3 73 2.0E-17 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMM_RS05080 74f0f0b82042e8a63778f727f2fad46c 74 SUPERFAMILY SSF47336 4 73 4.45E-15 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMM_RS05080 74f0f0b82042e8a63778f727f2fad46c 74 Pfam PF00550 Phosphopantetheine attachment site 4 67 4.7E-13 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain SMM_RS06095 6d95855a2fc598552980ed047d913d3e 60 Gene3D G3DSA:3.20.20.70 1 60 1.5E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SMM_RS06095 6d95855a2fc598552980ed047d913d3e 60 SUPERFAMILY SSF51395 1 60 1.02E-8 T 22-04-2016 SMM_RS06095 6d95855a2fc598552980ed047d913d3e 60 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 2 60 1.7E-4 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SMM_RS03515 3b5f787a9cf7fc3b4694d52619a2566f 90 Pfam PF12679 ABC-2 family transporter protein 25 90 6.0E-8 T 22-04-2016 IPR032688 ABC-2 family transporter protein GO:0006810 SMM_RS02205 e52ac6e8e3cc4c208f97f779422fc906 124 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 96 6.6E-17 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMM_RS02205 e52ac6e8e3cc4c208f97f779422fc906 124 SUPERFAMILY SSF69754 1 104 2.22E-17 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMM_RS02205 e52ac6e8e3cc4c208f97f779422fc906 124 Gene3D G3DSA:3.30.160.100 1 97 4.7E-20 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMM_RS02205 e52ac6e8e3cc4c208f97f779422fc906 124 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 1.3E-18 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SMM_RS03655 95c01bcc00dfadef1a8b06cd20631ad6 105 Gene3D G3DSA:3.40.50.300 12 99 4.2E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS03655 95c01bcc00dfadef1a8b06cd20631ad6 105 SUPERFAMILY SSF52540 8 100 1.95E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SMM_RS04210 a2c614479a4a2963ad00206482b2270d 99 SUPERFAMILY SSF56784 1 94 1.3E-14 T 22-04-2016 IPR023214 HAD-like domain SMM_RS04210 a2c614479a4a2963ad00206482b2270d 99 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 96 1.4E-9 T 22-04-2016 IPR023214 HAD-like domain SMM_RS04210 a2c614479a4a2963ad00206482b2270d 99 Gene3D G3DSA:3.40.50.1000 2 77 2.6E-9 T 22-04-2016 IPR023214 HAD-like domain SMM_RS01700 8132eba5607c6ea78edb047c58868ffa 83 Gene3D G3DSA:3.30.70.20 10 64 8.8E-9 T 22-04-2016 SMM_RS01700 8132eba5607c6ea78edb047c58868ffa 83 SUPERFAMILY SSF54862 9 69 2.79E-9 T 22-04-2016 SMM_RS02275 77d78b30a016bd7b80944d87044f5f59 140 Gene3D G3DSA:1.10.150.20 20 81 1.1E-9 T 22-04-2016 SMM_RS02275 77d78b30a016bd7b80944d87044f5f59 140 SUPERFAMILY SSF47781 16 81 3.67E-9 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SMM_RS01020 722958b8e9a4445f823a0e156b6dd2e9 133 Pfam PF02687 FtsX-like permease family 5 123 5.3E-8 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SMM_RS06150 ac773f4235ab65bfd63c81b1f6e59029 70 Gene3D G3DSA:3.40.50.10490 3 45 2.6E-10 T 22-04-2016