C248_RS00005 SM00382 ATPases associated with a variety of cellular activities C248_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain C248_RS00010 SM00480 DNA polymerase III beta subunit C248_RS00025 SM00387 Histidine kinase-like ATPases C248_RS00025 SM00433 TopoisomeraseII C248_RS00030 SM00434 DNA Topoisomerase IV C248_RS00070 SM00267 diguanylate cyclase C248_RS00085 SM00788 Adenylosuccinate synthetase C248_RS00100 SM00448 cheY-homologous receiver domain C248_RS00100 SM00862 Transcriptional regulatory protein, C terminal C248_RS00105 SM00091 PAS domain C248_RS00105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C248_RS00105 SM00387 Histidine kinase-like ATPases C248_RS00105 SM00388 His Kinase A (phosphoacceptor) domain C248_RS00120 SM00849 Metallo-beta-lactamase superfamily C248_RS00215 SM00857 Resolvase, N terminal domain C248_RS00420 SM00148 Phospholipase C, catalytic domain (part); domain X C248_RS00430 SM00342 helix_turn_helix, arabinose operon control protein C248_RS00465 SM00257 Lysin motif C248_RS00470 SM00347 helix_turn_helix multiple antibiotic resistance protein C248_RS00530 SM00470 ParB-like nuclease domain C248_RS00550 SM00822 C248_RS00550 C248_RS00595 SM00345 helix_turn_helix gluconate operon transcriptional repressor C248_RS00615 SM01133 C248_RS00615 C248_RS00635 SM00382 ATPases associated with a variety of cellular activities C248_RS00640 SM00062 Bacterial periplasmic substrate-binding proteins C248_RS00660 SM00530 Helix-turn-helix XRE-family like proteins C248_RS00740 SM00984 UDP binding domain C248_RS00780 SM00382 ATPases associated with a variety of cellular activities C248_RS00840 SM00859 Semialdehyde dehydrogenase, NAD binding domain C248_RS00905 SM00487 DEAD-like helicases superfamily C248_RS00915 SM00382 ATPases associated with a variety of cellular activities C248_RS00955 SM00382 ATPases associated with a variety of cellular activities C248_RS01000 SM00342 helix_turn_helix, arabinose operon control protein C248_RS01000 SM00448 cheY-homologous receiver domain C248_RS01070 SM00882 Coenzyme A transferase C248_RS01155 SM00829 Enoylreductase C248_RS01165 SM00829 Enoylreductase C248_RS01220 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C248_RS01220 SM00387 Histidine kinase-like ATPases C248_RS01225 SM00448 cheY-homologous receiver domain C248_RS01225 SM00850 LytTr DNA-binding domain C248_RS01245 SM00345 helix_turn_helix gluconate operon transcriptional repressor C248_RS01245 SM00866 C248_RS01245 C248_RS01290 SM00354 helix_turn _helix lactose operon repressor C248_RS01320 SM00382 ATPases associated with a variety of cellular activities C248_RS01470 SM00382 ATPases associated with a variety of cellular activities C248_RS01500 SM01130 C248_RS01500 C248_RS01555 SM00530 Helix-turn-helix XRE-family like proteins C248_RS01640 SM00482 DNA polymerase A domain C248_RS01710 SM00990 C248_RS01710 C248_RS01715 SM00487 DEAD-like helicases superfamily C248_RS01725 SM00507 HNH nucleases C248_RS01780 SM00635 Bacterial Ig-like domain 2 C248_RS01845 SM00287 Bacterial SH3 domain homologues C248_RS01845 SM00646 C248_RS01845 C248_RS01880 SM00506 Appr-1"-p processing enzyme C248_RS01920 SM00347 helix_turn_helix multiple antibiotic resistance protein C248_RS02000 SM00530 Helix-turn-helix XRE-family like proteins C248_RS02010 SM00382 ATPases associated with a variety of cellular activities C248_RS02060 SM00470 ParB-like nuclease domain C248_RS02135 SM00855 Phosphoglycerate mutase family C248_RS02205 SM00116 Domain in cystathionine beta-synthase and other proteins. C248_RS02205 SM01240 C248_RS02205 C248_RS02220 SM00530 Helix-turn-helix XRE-family like proteins C248_RS02225 SM00530 Helix-turn-helix XRE-family like proteins C248_RS02245 SM00885 D5 N terminal like C248_RS02445 SM00833 Cobalamin synthesis protein cobW C-terminal domain C248_RS02475 SM00014 Acid phosphatase homologues C248_RS02500 SM00382 ATPases associated with a variety of cellular activities C248_RS02500 SM00930 C248_RS02500 C248_RS02515 SM00257 Lysin motif C248_RS02570 SM00642 Alpha-amylase domain C248_RS02575 SM00345 helix_turn_helix gluconate operon transcriptional repressor C248_RS02575 SM00866 C248_RS02575 C248_RS02590 SM00382 ATPases associated with a variety of cellular activities C248_RS02600 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C248_RS02600 SM00493 C248_RS02600 C248_RS02665 SM00465 GIY-YIG type nucleases (URI domain) C248_RS02690 SM00493 C248_RS02690 C248_RS02695 SM00650 Ribosomal RNA adenine dimethylases C248_RS02735 SM01400 C248_RS02735 C248_RS02755 SM00487 DEAD-like helicases superfamily C248_RS02755 SM00490 helicase superfamily c-terminal domain C248_RS02755 SM00982 C248_RS02755 C248_RS02755 SM01058 CarD-like/TRCF domain C248_RS02770 SM00363 S4 RNA-binding domain C248_RS02780 SM00316 Ribosomal protein S1-like RNA-binding domain C248_RS02785 SM00977 TilS substrate C-terminal domain C248_RS02795 SM00382 ATPases associated with a variety of cellular activities C248_RS02815 SM00905 Dihydroneopterin aldolase C248_RS02905 SM00345 helix_turn_helix gluconate operon transcriptional repressor C248_RS02940 SM00382 ATPases associated with a variety of cellular activities C248_RS02940 SM01086 C-terminal, D2-small domain, of ClpB protein C248_RS02950 SM00382 ATPases associated with a variety of cellular activities C248_RS02955 SM00670 Large family of predicted nucleotide-binding domains C248_RS02970 SM00840 C248_RS02970 C248_RS02980 SM00967 RNA 2'-O ribose methyltransferase substrate binding C248_RS03000 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C248_RS03000 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C248_RS03005 SM00649 Ribosomal protein L11/L12 C248_RS03035 SM00663 RNA polymerase I subunit A N-terminus C248_RS03055 SM00838 Elongation factor G C-terminus C248_RS03055 SM00889 Elongation factor G, domain IV C248_RS03170 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C248_RS03220 SM00986 Uracil DNA glycosylase superfamily C248_RS03220 SM00987 UreE urease accessory protein, C-terminal domain C248_RS03370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C248_RS03380 SM00829 Enoylreductase C248_RS03395 SM00836 DALR anticodon binding domain C248_RS03395 SM01016 Arginyl tRNA synthetase N terminal dom C248_RS03400 SM00478 endonuclease III C248_RS03515 SM00382 ATPases associated with a variety of cellular activities C248_RS03520 SM00529 Helix-turn-helix diphteria tox regulatory element C248_RS03520 SM00899 C248_RS03520 C248_RS03535 SM00382 ATPases associated with a variety of cellular activities C248_RS03565 SM00382 ATPases associated with a variety of cellular activities C248_RS03585 SM00382 ATPases associated with a variety of cellular activities C248_RS03605 SM01120 C248_RS03605 C248_RS03650 SM00448 cheY-homologous receiver domain C248_RS03650 SM00862 Transcriptional regulatory protein, C terminal C248_RS03655 SM00387 Histidine kinase-like ATPases C248_RS03660 SM00382 ATPases associated with a variety of cellular activities C248_RS03680 SM00257 Lysin motif C248_RS03690 SM00342 helix_turn_helix, arabinose operon control protein C248_RS03785 SM00382 ATPases associated with a variety of cellular activities C248_RS03790 SM00382 ATPases associated with a variety of cellular activities C248_RS03795 SM00347 helix_turn_helix multiple antibiotic resistance protein C248_RS03800 SM00833 Cobalamin synthesis protein cobW C-terminal domain C248_RS03855 SM00420 helix_turn_helix, Deoxyribose operon repressor C248_RS03855 SM01134 C248_RS03855 C248_RS03880 SM01091 Transporter associated domain C248_RS03895 SM00387 Histidine kinase-like ATPases C248_RS03895 SM00388 His Kinase A (phosphoacceptor) domain C248_RS03900 SM00448 cheY-homologous receiver domain C248_RS03900 SM00862 Transcriptional regulatory protein, C terminal C248_RS03955 SM00796 Allophanate hydrolase subunit 1 C248_RS03960 SM00797 Allophanate hydrolase subunit 2 C248_RS03975 SM00382 ATPases associated with a variety of cellular activities C248_RS03980 SM00341 Helicase and RNase D C-terminal C248_RS03980 SM00487 DEAD-like helicases superfamily C248_RS03980 SM00490 helicase superfamily c-terminal domain C248_RS03980 SM00956 C248_RS03980 C248_RS03985 SM00382 ATPases associated with a variety of cellular activities C248_RS04010 SM00046 Diacylglycerol kinase catalytic domain (presumed) C248_RS04065 SM00382 ATPases associated with a variety of cellular activities C248_RS04120 SM00267 diguanylate cyclase C248_RS04140 SM00487 DEAD-like helicases superfamily C248_RS04140 SM00490 helicase superfamily c-terminal domain C248_RS04155 SM00957 SecA DEAD-like domain C248_RS04155 SM00958 SecA preprotein cross-linking domain C248_RS04165 SM00937 C248_RS04165 C248_RS04175 SM00257 Lysin motif C248_RS04190 SM00487 DEAD-like helicases superfamily C248_RS04190 SM00490 helicase superfamily c-terminal domain C248_RS04215 SM00028 Tetratricopeptide repeats C248_RS04255 SM00919 Malic enzyme, NAD binding domain C248_RS04255 SM01274 C248_RS04255 C248_RS04275 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C248_RS04295 SM01192 C248_RS04295 C248_RS04295 SM01193 C248_RS04295 C248_RS04315 SM00316 Ribosomal protein S1-like RNA-binding domain C248_RS04315 SM00357 Cold shock protein domain C248_RS04315 SM00955 C248_RS04315 C248_RS04370 SM00318 Staphylococcal nuclease homologues C248_RS04375 SM00357 Cold shock protein domain C248_RS04470 SM00493 C248_RS04470 C248_RS04480 SM00382 ATPases associated with a variety of cellular activities C248_RS04480 SM00930 C248_RS04480 C248_RS04505 SM00382 ATPases associated with a variety of cellular activities C248_RS04565 SM00729 Elongator protein 3, MiaB family, Radical SAM C248_RS04710 SM01298 C248_RS04710 C248_RS04720 SM00316 Ribosomal protein S1-like RNA-binding domain C248_RS04735 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C248_RS04820 SM00530 Helix-turn-helix XRE-family like proteins C248_RS04825 SM00889 Elongation factor G, domain IV C248_RS04870 SM00530 Helix-turn-helix XRE-family like proteins C248_RS04920 SM00382 ATPases associated with a variety of cellular activities C248_RS04920 SM01086 C-terminal, D2-small domain, of ClpB protein C248_RS04950 SM00825 Beta-ketoacyl synthase C248_RS04970 SM00382 ATPases associated with a variety of cellular activities C248_RS04975 SM00382 ATPases associated with a variety of cellular activities C248_RS04995 SM00382 ATPases associated with a variety of cellular activities C248_RS05000 SM00382 ATPases associated with a variety of cellular activities C248_RS05045 SM01118 C248_RS05045 C248_RS05055 SM00954 Region found in RelA / SpoT proteins C248_RS05070 SM00116 Domain in cystathionine beta-synthase and other proteins. C248_RS05070 SM00924 MgtE intracellular N domain C248_RS05135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C248_RS05165 SM00914 C248_RS05165 C248_RS05205 SM00382 ATPases associated with a variety of cellular activities C248_RS05295 SM00347 helix_turn_helix multiple antibiotic resistance protein C248_RS05305 SM00047 Lysozyme subfamily 2 C248_RS05305 SM00644 C248_RS05305 C248_RS05365 SM01001 AIR carboxylase C248_RS05385 SM01211 C248_RS05385 C248_RS05410 SM00798 AICARFT/IMPCHase bienzyme C248_RS05410 SM00851 MGS-like domain C248_RS05415 SM01209 C248_RS05415 C248_RS05415 SM01210 C248_RS05415 C248_RS05425 SM00382 ATPases associated with a variety of cellular activities C248_RS05495 SM00849 Metallo-beta-lactamase superfamily C248_RS05525 SM00861 Transketolase, pyrimidine binding domain C248_RS05545 SM00530 Helix-turn-helix XRE-family like proteins C248_RS05550 SM00382 ATPases associated with a variety of cellular activities C248_RS05600 SM00838 Elongation factor G C-terminus C248_RS05625 SM00878 Biotin carboxylase C-terminal domain C248_RS05705 SM00725 NEAr Transporter domain C248_RS05710 SM00725 NEAr Transporter domain C248_RS05715 SM00725 NEAr Transporter domain C248_RS05750 SM00967 RNA 2'-O ribose methyltransferase substrate binding C248_RS05760 SM00873 B3/4 domain C248_RS05760 SM00874 tRNA synthetase B5 domain C248_RS05760 SM00896 Ferredoxin-fold anticodon binding domain C248_RS05780 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C248_RS05780 SM00481 DNA polymerase alpha chain like domain C248_RS05780 SM00483 DNA polymerase X family C248_RS05785 SM00463 Small MutS-related domain C248_RS05785 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C248_RS05785 SM00534 ATPase domain of DNA mismatch repair MUTS family C248_RS05800 SM00465 GIY-YIG type nucleases (URI domain) C248_RS05995 SM00740 C248_RS05995 C248_RS06015 SM00842 Cell division protein FtsA C248_RS06020 SM00864 Tubulin/FtsZ family, GTPase domain C248_RS06020 SM00865 Tubulin/FtsZ family, C-terminal domain C248_RS06045 SM00363 S4 RNA-binding domain C248_RS06070 SM00363 S4 RNA-binding domain C248_RS06095 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C248_RS06100 SM00851 MGS-like domain C248_RS06100 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C248_RS06100 SM01209 C248_RS06100 C248_RS06105 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C248_RS06130 SM00072 Guanylate kinase homologues. C248_RS06135 SM01409 C248_RS06135 C248_RS06145 SM00487 DEAD-like helicases superfamily C248_RS06145 SM00490 helicase superfamily c-terminal domain C248_RS06180 SM00331 Sigma factor PP2C-like phosphatases C248_RS06180 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain C248_RS06185 SM00220 Serine/Threonine protein kinases, catalytic domain C248_RS06185 SM00740 C248_RS06185 C248_RS06200 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain C248_RS06215 SM01120 C248_RS06215 C248_RS06215 SM01121 C248_RS06215 C248_RS06220 SM00487 DEAD-like helicases superfamily C248_RS06220 SM00490 helicase superfamily c-terminal domain C248_RS06235 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C248_RS06240 SM00822 C248_RS06240 C248_RS06255 SM00358 Double-stranded RNA binding motif C248_RS06255 SM00535 Ribonuclease III family C248_RS06260 SM00968 SMC proteins Flexible Hinge Domain C248_RS06265 SM00382 ATPases associated with a variety of cellular activities C248_RS06265 SM00962 SRP54-type protein, GTPase domain C248_RS06265 SM00963 SRP54-type protein, helical bundle domain C248_RS06275 SM00382 ATPases associated with a variety of cellular activities C248_RS06275 SM00962 SRP54-type protein, GTPase domain C248_RS06275 SM00963 SRP54-type protein, helical bundle domain C248_RS06325 SM00881 CoA binding domain C248_RS06345 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C248_RS06345 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C248_RS06345 SM00493 C248_RS06345 C248_RS06365 SM00382 ATPases associated with a variety of cellular activities C248_RS06365 SM01086 C-terminal, D2-small domain, of ClpB protein C248_RS06425 SM00479 C248_RS06425 C248_RS06425 SM00481 DNA polymerase alpha chain like domain C248_RS06435 SM00316 Ribosomal protein S1-like RNA-binding domain C248_RS06435 SM00322 K homology RNA-binding domain C248_RS06465 SM00904 Riboflavin kinase C248_RS06470 SM01387 C248_RS06470 C248_RS06475 SM00316 Ribosomal protein S1-like RNA-binding domain C248_RS06475 SM00322 K homology RNA-binding domain C248_RS06480 SM00849 Metallo-beta-lactamase superfamily C248_RS06485 SM00382 ATPases associated with a variety of cellular activities C248_RS06485 SM00843 C248_RS06485 C248_RS06490 SM00345 helix_turn_helix gluconate operon transcriptional repressor C248_RS06490 SM00866 C248_RS06490 C248_RS06515 SM00530 Helix-turn-helix XRE-family like proteins C248_RS06525 SM00852 Probable molybdopterin binding domain C248_RS06530 SM00382 ATPases associated with a variety of cellular activities C248_RS06535 SM00322 K homology RNA-binding domain C248_RS06535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C248_RS06570 SM00729 Elongator protein 3, MiaB family, Radical SAM C248_RS06585 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C248_RS06585 SM00534 ATPase domain of DNA mismatch repair MUTS family C248_RS06590 SM00853 MutL C terminal dimerisation domain C248_RS06590 SM01340 C248_RS06590 C248_RS06645 SM00422 helix_turn_helix, mercury resistance C248_RS06650 SM01230 C248_RS06650 C248_RS06735 SM00155 Phospholipase D. Active site motifs. C248_RS06745 SM00318 Staphylococcal nuclease homologues C248_RS06800 SM01060 C248_RS06800 C248_RS06815 SM01240 C248_RS06815 C248_RS06845 SM00861 Transketolase, pyrimidine binding domain C248_RS06905 SM01207 C248_RS06905 C248_RS06910 SM00387 Histidine kinase-like ATPases C248_RS06910 SM00433 TopoisomeraseII C248_RS06915 SM00434 DNA Topoisomerase IV C248_RS06930 SM01061 CAT RNA binding domain C248_RS07035 SM00382 ATPases associated with a variety of cellular activities C248_RS07040 SM00382 ATPases associated with a variety of cellular activities C248_RS07085 SM00382 ATPases associated with a variety of cellular activities C248_RS07115 SM00382 ATPases associated with a variety of cellular activities C248_RS07125 SM00859 Semialdehyde dehydrogenase, NAD binding domain C248_RS07130 SM01130 C248_RS07130 C248_RS07150 SM01005 Alanine racemase, C-terminal domain C248_RS07170 SM00357 Cold shock protein domain C248_RS07205 SM00327 von Willebrand factor (vWF) type A domain C248_RS07230 SM00861 Transketolase, pyrimidine binding domain C248_RS07235 SM00387 Histidine kinase-like ATPases C248_RS07235 SM00388 His Kinase A (phosphoacceptor) domain C248_RS07240 SM00448 cheY-homologous receiver domain C248_RS07240 SM00862 Transcriptional regulatory protein, C terminal C248_RS07255 SM00014 Acid phosphatase homologues C248_RS07270 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C248_RS07270 SM00245 tail specific protease C248_RS07320 SM00567 E-Z type HEAT repeats C248_RS07320 SM00932 Scaffold protein Nfu/NifU N terminal C248_RS07325 SM00932 Scaffold protein Nfu/NifU N terminal C248_RS07350 SM00844 GA module C248_RS07370 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C248_RS07370 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C248_RS07375 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C248_RS07375 SM00475 5'-3' exonuclease C248_RS07395 SM00981 C248_RS07395 C248_RS07435 SM00478 endonuclease III C248_RS07435 SM00525 C248_RS07435 C248_RS07450 SM00479 C248_RS07450 C248_RS07450 SM00491 C248_RS07450 C248_RS07485 SM00914 C248_RS07485 C248_RS07515 SM00562 C248_RS07515 C248_RS07540 SM00411 bacterial (prokaryotic) histone like domain C248_RS07555 SM00316 Ribosomal protein S1-like RNA-binding domain C248_RS07580 SM00870 C248_RS07580 C248_RS07595 SM00257 Lysin motif C248_RS07600 SM00487 DEAD-like helicases superfamily C248_RS07600 SM00490 helicase superfamily c-terminal domain C248_RS07655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C248_RS07655 SM00387 Histidine kinase-like ATPases C248_RS07655 SM00388 His Kinase A (phosphoacceptor) domain C248_RS07660 SM00448 cheY-homologous receiver domain C248_RS07660 SM00862 Transcriptional regulatory protein, C terminal C248_RS07665 SM00363 S4 RNA-binding domain C248_RS07730 SM00342 helix_turn_helix, arabinose operon control protein C248_RS07730 SM00871 Bacterial transcription activator, effector binding domain C248_RS07735 SM00642 Alpha-amylase domain C248_RS07740 SM00354 helix_turn _helix lactose operon repressor C248_RS07755 SM01350 C248_RS07755 C248_RS07785 SM00861 Transketolase, pyrimidine binding domain C248_RS07835 SM00878 Biotin carboxylase C-terminal domain C248_RS07845 SM00841 Elongation factor P, C-terminal C248_RS07845 SM01185 C248_RS07845 C248_RS07870 SM00450 Rhodanese Homology Domain C248_RS07930 SM00849 Metallo-beta-lactamase superfamily C248_RS07985 SM00382 ATPases associated with a variety of cellular activities C248_RS07990 SM00518 AP endonuclease family 2 C248_RS07995 SM00487 DEAD-like helicases superfamily C248_RS07995 SM00490 helicase superfamily c-terminal domain C248_RS08015 SM00400 zinc finger C248_RS08015 SM00493 C248_RS08015 C248_RS08025 SM00116 Domain in cystathionine beta-synthase and other proteins. C248_RS08085 SM00729 Elongator protein 3, MiaB family, Radical SAM C248_RS08100 SM00271 DnaJ molecular chaperone homology domain C248_RS08120 SM00729 Elongator protein 3, MiaB family, Radical SAM C248_RS08130 SM00838 Elongation factor G C-terminus C248_RS08145 SM00849 Metallo-beta-lactamase superfamily C248_RS08155 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C248_RS08170 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C248_RS08180 SM01103 C248_RS08180 C248_RS08235 SM00878 Biotin carboxylase C-terminal domain C248_RS08245 SM00797 Allophanate hydrolase subunit 2 C248_RS08250 SM00796 Allophanate hydrolase subunit 1 C248_RS08285 SM00732 Likely ribonuclease with RNase H fold. C248_RS08300 SM00382 ATPases associated with a variety of cellular activities C248_RS08305 SM00028 Tetratricopeptide repeats C248_RS08340 SM00382 ATPases associated with a variety of cellular activities C248_RS08365 SM00287 Bacterial SH3 domain homologues C248_RS08365 SM00646 C248_RS08365 C248_RS08375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C248_RS08375 SM00954 Region found in RelA / SpoT proteins C248_RS08395 SM01323 C248_RS08395 C248_RS08410 SM00382 ATPases associated with a variety of cellular activities C248_RS08415 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C248_RS08470 SM00382 ATPases associated with a variety of cellular activities C248_RS08535 SM01004 Delta-aminolevulinic acid dehydratase C248_RS08565 SM00382 ATPases associated with a variety of cellular activities C248_RS08565 SM00994 ClpX C4-type zinc finger C248_RS08565 SM01086 C-terminal, D2-small domain, of ClpB protein C248_RS08615 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C248_RS08640 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C248_RS08650 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C248_RS08650 SM01232 C248_RS08650 C248_RS08655 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C248_RS08655 SM00474 3'-5' exonuclease C248_RS08655 SM00475 5'-3' exonuclease C248_RS08655 SM00482 DNA polymerase A domain C248_RS08665 SM00387 Histidine kinase-like ATPases C248_RS08665 SM00388 His Kinase A (phosphoacceptor) domain C248_RS08670 SM00448 cheY-homologous receiver domain C248_RS08670 SM00862 Transcriptional regulatory protein, C terminal C248_RS08680 SM01329 C248_RS08680 C248_RS08715 SM00919 Malic enzyme, NAD binding domain C248_RS08715 SM01274 C248_RS08715 C248_RS08720 SM00481 DNA polymerase alpha chain like domain C248_RS08735 SM00116 Domain in cystathionine beta-synthase and other proteins. C248_RS08750 SM00849 Metallo-beta-lactamase superfamily C248_RS08765 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C248_RS08765 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C248_RS08795 SM00981 C248_RS08795 C248_RS08810 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C248_RS08815 SM00363 S4 RNA-binding domain C248_RS08815 SM01390 C248_RS08815 C248_RS08860 SM00563 Phosphate acyltransferases C248_RS08865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C248_RS08870 SM00363 S4 RNA-binding domain C248_RS08885 SM00725 NEAr Transporter domain C248_RS08915 SM00354 helix_turn _helix lactose operon repressor C248_RS08925 SM00830 Chorismate mutase type II C248_RS08950 SM00843 C248_RS08950 C248_RS08980 SM00849 Metallo-beta-lactamase superfamily C248_RS09015 SM00363 S4 RNA-binding domain C248_RS09035 SM00450 Rhodanese Homology Domain C248_RS09050 SM00729 Elongator protein 3, MiaB family, Radical SAM C248_RS09060 SM00347 helix_turn_helix multiple antibiotic resistance protein C248_RS09105 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C248_RS09115 SM00047 Lysozyme subfamily 2 C248_RS09200 SM01234 C248_RS09200 C248_RS09220 SM00894 Excalibur calcium-binding domain C248_RS09405 SM00382 ATPases associated with a variety of cellular activities C248_RS09430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C248_RS09460 SM00530 Helix-turn-helix XRE-family like proteins C248_RS09465 SM00421 helix_turn_helix, Lux Regulon C248_RS09465 SM00448 cheY-homologous receiver domain C248_RS09515 SM00382 ATPases associated with a variety of cellular activities C248_RS09520 SM00062 Bacterial periplasmic substrate-binding proteins C248_RS09700 SM00382 ATPases associated with a variety of cellular activities C248_RS09710 SM00478 endonuclease III C248_RS09780 SM00226 Low molecular weight phosphatase family C248_RS09795 SM00421 helix_turn_helix, Lux Regulon C248_RS09795 SM00448 cheY-homologous receiver domain C248_RS09800 SM00387 Histidine kinase-like ATPases C248_RS09865 SM00479 C248_RS09865 C248_RS09885 SM00046 Diacylglycerol kinase catalytic domain (presumed) C248_RS09895 SM00845 GatB domain C248_RS09920 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C248_RS09920 SM00292 breast cancer carboxy-terminal domain C248_RS09920 SM00532 Ligase N family C248_RS09940 SM00998 Adenylosuccinate lyase C-terminus C248_RS10005 SM01131 C248_RS10005 C248_RS10105 SM00382 ATPases associated with a variety of cellular activities C248_RS10115 SM00382 ATPases associated with a variety of cellular activities C248_RS10120 SM00345 helix_turn_helix gluconate operon transcriptional repressor C248_RS10190 SM00883 Chaperonin 10 Kd subunit C248_RS10220 SM00793 Accessory gene regulator B C248_RS10225 SM00794 Staphylococcal AgrD protein C248_RS10235 SM00448 cheY-homologous receiver domain C248_RS10235 SM00850 LytTr DNA-binding domain C248_RS10245 SM00640 Glycosyl hydrolases family 32 C248_RS10250 SM00354 helix_turn _helix lactose operon repressor C248_RS10270 SM00881 CoA binding domain C248_RS10275 SM00382 ATPases associated with a variety of cellular activities C248_RS10285 SM00534 ATPase domain of DNA mismatch repair MUTS family C248_RS10335 SM00917 LeuA allosteric (dimerisation) domain C248_RS10340 SM01329 C248_RS10340 C248_RS10390 SM00731 SprT homologues. C248_RS10395 SM00316 Ribosomal protein S1-like RNA-binding domain C248_RS10395 SM00732 Likely ribonuclease with RNase H fold. C248_RS10415 SM00331 Sigma factor PP2C-like phosphatases C248_RS10415 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain C248_RS10435 SM01005 Alanine racemase, C-terminal domain C248_RS10480 SM00387 Histidine kinase-like ATPases C248_RS10480 SM00388 His Kinase A (phosphoacceptor) domain C248_RS10485 SM00448 cheY-homologous receiver domain C248_RS10485 SM00862 Transcriptional regulatory protein, C terminal C248_RS10490 SM00487 DEAD-like helicases superfamily C248_RS10490 SM00490 helicase superfamily c-terminal domain C248_RS10525 SM00155 Phospholipase D. Active site motifs. C248_RS10530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C248_RS10615 SM00382 ATPases associated with a variety of cellular activities C248_RS10675 SM00226 Low molecular weight phosphatase family C248_RS10690 SM00937 C248_RS10690 C248_RS10705 SM00357 Cold shock protein domain C248_RS10705 SM00382 ATPases associated with a variety of cellular activities C248_RS10705 SM00959 Rho termination factor, N-terminal domain C248_RS10785 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain C248_RS10795 SM01133 C248_RS10795 C248_RS10835 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C248_RS10865 SM00382 ATPases associated with a variety of cellular activities C248_RS11145 SM00829 Enoylreductase C248_RS11150 SM00829 Enoylreductase C248_RS11175 SM01133 C248_RS11175 C248_RS11195 SM00420 helix_turn_helix, Deoxyribose operon repressor C248_RS11195 SM01134 C248_RS11195 C248_RS11225 SM00422 helix_turn_helix, mercury resistance C248_RS11300 SM00382 ATPases associated with a variety of cellular activities C248_RS11305 SM00382 ATPases associated with a variety of cellular activities C248_RS11315 SM00662 RNA polymerases D C248_RS11335 SM00316 Ribosomal protein S1-like RNA-binding domain C248_RS11390 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C248_RS11395 SM01374 C248_RS11395 C248_RS11415 SM00322 K homology RNA-binding domain C248_RS11430 SM01382 C248_RS11430 C248_RS11430 SM01383 C248_RS11430 C248_RS11450 SM01403 C248_RS11450 C248_RS11465 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C248_RS11465 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C248_RS11465 SM00493 C248_RS11465 C248_RS11525 SM00347 helix_turn_helix multiple antibiotic resistance protein C248_RS11550 SM00729 Elongator protein 3, MiaB family, Radical SAM C248_RS11575 SM00852 Probable molybdopterin binding domain C248_RS11585 SM00852 Probable molybdopterin binding domain C248_RS11595 SM00382 ATPases associated with a variety of cellular activities C248_RS11660 SM00988 UreE urease accessory protein, N-terminal domain C248_RS11700 SM00342 helix_turn_helix, arabinose operon control protein C248_RS11755 SM00047 Lysozyme subfamily 2 C248_RS11770 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C248_RS11770 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C248_RS11785 SM00420 helix_turn_helix, Deoxyribose operon repressor C248_RS11930 SM00382 ATPases associated with a variety of cellular activities C248_RS12020 SM00347 helix_turn_helix multiple antibiotic resistance protein C248_RS12030 SM00382 ATPases associated with a variety of cellular activities C248_RS12040 SM00448 cheY-homologous receiver domain C248_RS12040 SM00862 Transcriptional regulatory protein, C terminal C248_RS12045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C248_RS12045 SM00387 Histidine kinase-like ATPases C248_RS12045 SM00388 His Kinase A (phosphoacceptor) domain C248_RS12050 SM00850 LytTr DNA-binding domain C248_RS12090 SM00829 Enoylreductase C248_RS12145 SM00342 helix_turn_helix, arabinose operon control protein C248_RS12170 SM00347 helix_turn_helix multiple antibiotic resistance protein C248_RS12190 SM00422 helix_turn_helix, mercury resistance C248_RS12195 SM00421 helix_turn_helix, Lux Regulon C248_RS12195 SM00448 cheY-homologous receiver domain C248_RS12200 SM00387 Histidine kinase-like ATPases C248_RS12225 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C248_RS12295 SM00382 ATPases associated with a variety of cellular activities C248_RS12305 SM00062 Bacterial periplasmic substrate-binding proteins C248_RS12305 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. C248_RS12320 SM00855 Phosphoglycerate mutase family C248_RS12375 SM00729 Elongator protein 3, MiaB family, Radical SAM C248_RS12375 SM00876 Biotin and Thiamin Synthesis associated domain C248_RS12400 SM00382 ATPases associated with a variety of cellular activities C248_RS12405 SM00382 ATPases associated with a variety of cellular activities C248_RS12440 SM00871 Bacterial transcription activator, effector binding domain C248_RS12515 SM00116 Domain in cystathionine beta-synthase and other proteins. C248_RS12515 SM00382 ATPases associated with a variety of cellular activities C248_RS12555 SM00382 ATPases associated with a variety of cellular activities C248_RS12585 SM00382 ATPases associated with a variety of cellular activities C248_RS12590 SM00382 ATPases associated with a variety of cellular activities C248_RS12750 SM00530 Helix-turn-helix XRE-family like proteins C248_RS12800 SM00345 helix_turn_helix gluconate operon transcriptional repressor C248_RS12800 SM00895 C248_RS12800 C248_RS12805 SM00422 helix_turn_helix, mercury resistance C248_RS12810 SM00954 Region found in RelA / SpoT proteins C248_RS12845 SM00347 helix_turn_helix multiple antibiotic resistance protein C248_RS12850 SM00382 ATPases associated with a variety of cellular activities C248_RS12885 SM00347 helix_turn_helix multiple antibiotic resistance protein C248_RS13025 SM00382 ATPases associated with a variety of cellular activities C248_RS13025 SM01086 C-terminal, D2-small domain, of ClpB protein C248_RS13040 SM00899 C248_RS13040 C248_RS13065 SM01266 C248_RS13065 C248_RS13265 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C248_RS13445 SM00382 ATPases associated with a variety of cellular activities C248_RS13450 SM00387 Histidine kinase-like ATPases C248_RS13455 SM00448 cheY-homologous receiver domain C248_RS13455 SM00862 Transcriptional regulatory protein, C terminal C248_RS13470 SM00098 Alkaline phosphatase homologues C248_RS13475 SM00347 helix_turn_helix multiple antibiotic resistance protein C248_RS13560 SM00047 Lysozyme subfamily 2 C248_RS13585 SM00957 SecA DEAD-like domain C248_RS13585 SM00958 SecA preprotein cross-linking domain C248_RS13615 SM00903 Flavin reductase like domain C248_RS13645 SM00903 Flavin reductase like domain C248_RS13760 SM00867 YceI-like domain C248_RS13770 SM00450 Rhodanese Homology Domain C248_RS13830 SM00382 ATPases associated with a variety of cellular activities C248_RS13845 SM00357 Cold shock protein domain C248_RS13850 SM00530 Helix-turn-helix XRE-family like proteins C248_RS13865 SM00470 ParB-like nuclease domain C248_RS13875 SM01228 C248_RS13875