CU118_RS00020 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU118_RS00055 SM00382 ATPases associated with a variety of cellular activities CU118_RS00055 SM01086 C-terminal, D2-small domain, of ClpB protein CU118_RS00060 SM00382 ATPases associated with a variety of cellular activities CU118_RS00065 SM00670 Large family of predicted nucleotide-binding domains CU118_RS00085 SM00840 CU118_RS00085 CU118_RS00090 SM00535 Ribonuclease III family CU118_RS00095 SM00967 RNA 2'-O ribose methyltransferase substrate binding CU118_RS00120 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CU118_RS00120 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CU118_RS00125 SM00649 Ribosomal protein L11/L12 CU118_RS00160 SM00663 RNA polymerase I subunit A N-terminus CU118_RS00180 SM00838 Elongation factor G C-terminus CU118_RS00180 SM00889 Elongation factor G, domain IV CU118_RS00300 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CU118_RS00355 SM00986 Uracil DNA glycosylase superfamily CU118_RS00355 SM00987 UreE urease accessory protein, C-terminal domain CU118_RS00480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU118_RS00490 SM00829 Enoylreductase CU118_RS00505 SM00836 DALR anticodon binding domain CU118_RS00505 SM01016 Arginyl tRNA synthetase N terminal dom CU118_RS00515 SM00478 endonuclease III CU118_RS00630 SM00382 ATPases associated with a variety of cellular activities CU118_RS00635 SM00529 Helix-turn-helix diphteria tox regulatory element CU118_RS00635 SM00899 CU118_RS00635 CU118_RS00650 SM00382 ATPases associated with a variety of cellular activities CU118_RS00680 SM00382 ATPases associated with a variety of cellular activities CU118_RS00700 SM00382 ATPases associated with a variety of cellular activities CU118_RS00720 SM01120 CU118_RS00720 CU118_RS00765 SM00448 cheY-homologous receiver domain CU118_RS00765 SM00862 Transcriptional regulatory protein, C terminal CU118_RS00770 SM00387 Histidine kinase-like ATPases CU118_RS00775 SM00382 ATPases associated with a variety of cellular activities CU118_RS00795 SM00257 Lysin motif CU118_RS00805 SM00342 helix_turn_helix, arabinose operon control protein CU118_RS00905 SM00382 ATPases associated with a variety of cellular activities CU118_RS00910 SM00382 ATPases associated with a variety of cellular activities CU118_RS00915 SM00347 helix_turn_helix multiple antibiotic resistance protein CU118_RS00920 SM00833 Cobalamin synthesis protein cobW C-terminal domain CU118_RS00975 SM00420 helix_turn_helix, Deoxyribose operon repressor CU118_RS00975 SM01134 CU118_RS00975 CU118_RS00995 SM01091 Transporter associated domain CU118_RS01010 SM00387 Histidine kinase-like ATPases CU118_RS01010 SM00388 His Kinase A (phosphoacceptor) domain CU118_RS01015 SM00448 cheY-homologous receiver domain CU118_RS01015 SM00862 Transcriptional regulatory protein, C terminal CU118_RS01070 SM00796 Allophanate hydrolase subunit 1 CU118_RS01075 SM00797 Allophanate hydrolase subunit 2 CU118_RS01085 SM00382 ATPases associated with a variety of cellular activities CU118_RS01090 SM00341 Helicase and RNase D C-terminal CU118_RS01090 SM00487 DEAD-like helicases superfamily CU118_RS01090 SM00490 helicase superfamily c-terminal domain CU118_RS01090 SM00956 CU118_RS01090 CU118_RS01095 SM00382 ATPases associated with a variety of cellular activities CU118_RS01120 SM00046 Diacylglycerol kinase catalytic domain (presumed) CU118_RS01185 SM00382 ATPases associated with a variety of cellular activities CU118_RS01240 SM00267 diguanylate cyclase CU118_RS01260 SM00487 DEAD-like helicases superfamily CU118_RS01260 SM00490 helicase superfamily c-terminal domain CU118_RS01275 SM00957 SecA DEAD-like domain CU118_RS01275 SM00958 SecA preprotein cross-linking domain CU118_RS01295 SM00257 Lysin motif CU118_RS01310 SM00487 DEAD-like helicases superfamily CU118_RS01310 SM00490 helicase superfamily c-terminal domain CU118_RS01340 SM00028 Tetratricopeptide repeats CU118_RS01375 SM00919 Malic enzyme, NAD binding domain CU118_RS01375 SM01274 CU118_RS01375 CU118_RS01395 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CU118_RS01415 SM01192 CU118_RS01415 CU118_RS01415 SM01193 CU118_RS01415 CU118_RS01435 SM00316 Ribosomal protein S1-like RNA-binding domain CU118_RS01435 SM00357 Cold shock protein domain CU118_RS01435 SM00955 CU118_RS01435 CU118_RS01500 SM00318 Staphylococcal nuclease homologues CU118_RS01505 SM00357 Cold shock protein domain CU118_RS01545 SM00855 Phosphoglycerate mutase family CU118_RS01600 SM00493 CU118_RS01600 CU118_RS01610 SM00382 ATPases associated with a variety of cellular activities CU118_RS01610 SM00930 CU118_RS01610 CU118_RS01640 SM00382 ATPases associated with a variety of cellular activities CU118_RS01695 SM00729 Elongator protein 3, MiaB family, Radical SAM CU118_RS01840 SM01298 CU118_RS01840 CU118_RS01850 SM00316 Ribosomal protein S1-like RNA-binding domain CU118_RS01865 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CU118_RS01965 SM00382 ATPases associated with a variety of cellular activities CU118_RS01965 SM01086 C-terminal, D2-small domain, of ClpB protein CU118_RS02000 SM00825 Beta-ketoacyl synthase CU118_RS02020 SM00382 ATPases associated with a variety of cellular activities CU118_RS02025 SM00382 ATPases associated with a variety of cellular activities CU118_RS02040 SM00382 ATPases associated with a variety of cellular activities CU118_RS02045 SM00382 ATPases associated with a variety of cellular activities CU118_RS02095 SM01118 CU118_RS02095 CU118_RS02105 SM00954 Region found in RelA / SpoT proteins CU118_RS02120 SM00116 Domain in cystathionine beta-synthase and other proteins. CU118_RS02120 SM00924 MgtE intracellular N domain CU118_RS02185 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CU118_RS02215 SM00914 CU118_RS02215 CU118_RS02250 SM00382 ATPases associated with a variety of cellular activities CU118_RS02350 SM00347 helix_turn_helix multiple antibiotic resistance protein CU118_RS02360 SM00047 Lysozyme subfamily 2 CU118_RS02360 SM00644 CU118_RS02360 CU118_RS02420 SM01001 AIR carboxylase CU118_RS02440 SM01211 CU118_RS02440 CU118_RS02465 SM00798 AICARFT/IMPCHase bienzyme CU118_RS02465 SM00851 MGS-like domain CU118_RS02470 SM01209 CU118_RS02470 CU118_RS02470 SM01210 CU118_RS02470 CU118_RS02480 SM00382 ATPases associated with a variety of cellular activities CU118_RS02550 SM00849 Metallo-beta-lactamase superfamily CU118_RS02580 SM00861 Transketolase, pyrimidine binding domain CU118_RS02600 SM00530 Helix-turn-helix XRE-family like proteins CU118_RS02605 SM00382 ATPases associated with a variety of cellular activities CU118_RS02655 SM00838 Elongation factor G C-terminus CU118_RS02680 SM00878 Biotin carboxylase C-terminal domain CU118_RS02765 SM00725 NEAr Transporter domain CU118_RS02770 SM00725 NEAr Transporter domain CU118_RS02775 SM00725 NEAr Transporter domain CU118_RS02810 SM00967 RNA 2'-O ribose methyltransferase substrate binding CU118_RS02820 SM00873 B3/4 domain CU118_RS02820 SM00874 tRNA synthetase B5 domain CU118_RS02820 SM00896 Ferredoxin-fold anticodon binding domain CU118_RS02850 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CU118_RS02850 SM00481 DNA polymerase alpha chain like domain CU118_RS02850 SM00483 DNA polymerase X family CU118_RS02855 SM00463 Small MutS-related domain CU118_RS02855 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CU118_RS02855 SM00534 ATPase domain of DNA mismatch repair MUTS family CU118_RS02870 SM00465 GIY-YIG type nucleases (URI domain) CU118_RS03050 SM00740 CU118_RS03050 CU118_RS03070 SM00842 Cell division protein FtsA CU118_RS03075 SM00864 Tubulin/FtsZ family, GTPase domain CU118_RS03075 SM00865 Tubulin/FtsZ family, C-terminal domain CU118_RS03100 SM00363 S4 RNA-binding domain CU118_RS03125 SM00363 S4 RNA-binding domain CU118_RS03150 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CU118_RS03155 SM00851 MGS-like domain CU118_RS03155 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CU118_RS03155 SM01209 CU118_RS03155 CU118_RS03160 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CU118_RS03185 SM00072 Guanylate kinase homologues. CU118_RS03190 SM01409 CU118_RS03190 CU118_RS03200 SM00487 DEAD-like helicases superfamily CU118_RS03200 SM00490 helicase superfamily c-terminal domain CU118_RS03235 SM00331 Sigma factor PP2C-like phosphatases CU118_RS03235 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CU118_RS03240 SM00220 Serine/Threonine protein kinases, catalytic domain CU118_RS03240 SM00740 CU118_RS03240 CU118_RS03255 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CU118_RS03270 SM01120 CU118_RS03270 CU118_RS03270 SM01121 CU118_RS03270 CU118_RS03275 SM00487 DEAD-like helicases superfamily CU118_RS03275 SM00490 helicase superfamily c-terminal domain CU118_RS03300 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CU118_RS03305 SM00822 CU118_RS03305 CU118_RS03320 SM00358 Double-stranded RNA binding motif CU118_RS03320 SM00535 Ribonuclease III family CU118_RS03325 SM00968 SMC proteins Flexible Hinge Domain CU118_RS03330 SM00382 ATPases associated with a variety of cellular activities CU118_RS03330 SM00962 SRP54-type protein, GTPase domain CU118_RS03330 SM00963 SRP54-type protein, helical bundle domain CU118_RS03340 SM00382 ATPases associated with a variety of cellular activities CU118_RS03340 SM00962 SRP54-type protein, GTPase domain CU118_RS03340 SM00963 SRP54-type protein, helical bundle domain CU118_RS03385 SM00881 CoA binding domain CU118_RS03395 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CU118_RS03395 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CU118_RS03395 SM00493 CU118_RS03395 CU118_RS03415 SM00382 ATPases associated with a variety of cellular activities CU118_RS03415 SM01086 C-terminal, D2-small domain, of ClpB protein CU118_RS03475 SM00479 CU118_RS03475 CU118_RS03475 SM00481 DNA polymerase alpha chain like domain CU118_RS03490 SM00316 Ribosomal protein S1-like RNA-binding domain CU118_RS03490 SM00322 K homology RNA-binding domain CU118_RS03520 SM00904 Riboflavin kinase CU118_RS03525 SM01387 CU118_RS03525 CU118_RS03530 SM00316 Ribosomal protein S1-like RNA-binding domain CU118_RS03530 SM00322 K homology RNA-binding domain CU118_RS03540 SM00849 Metallo-beta-lactamase superfamily CU118_RS03545 SM00382 ATPases associated with a variety of cellular activities CU118_RS03545 SM00843 CU118_RS03545 CU118_RS03550 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU118_RS03550 SM00866 CU118_RS03550 CU118_RS03575 SM00530 Helix-turn-helix XRE-family like proteins CU118_RS03585 SM00852 Probable molybdopterin binding domain CU118_RS03590 SM00382 ATPases associated with a variety of cellular activities CU118_RS03595 SM00322 K homology RNA-binding domain CU118_RS03595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU118_RS03625 SM00729 Elongator protein 3, MiaB family, Radical SAM CU118_RS03640 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CU118_RS03640 SM00534 ATPase domain of DNA mismatch repair MUTS family CU118_RS03645 SM00853 MutL C terminal dimerisation domain CU118_RS03645 SM01340 CU118_RS03645 CU118_RS03700 SM00422 helix_turn_helix, mercury resistance CU118_RS03705 SM01230 CU118_RS03705 CU118_RS03785 SM00155 Phospholipase D. Active site motifs. CU118_RS03790 SM00382 ATPases associated with a variety of cellular activities CU118_RS03805 SM00421 helix_turn_helix, Lux Regulon CU118_RS03805 SM00448 cheY-homologous receiver domain CU118_RS03815 SM00318 Staphylococcal nuclease homologues CU118_RS03870 SM01060 CU118_RS03870 CU118_RS03885 SM01240 CU118_RS03885 CU118_RS03920 SM00861 Transketolase, pyrimidine binding domain CU118_RS03975 SM01207 CU118_RS03975 CU118_RS03980 SM00387 Histidine kinase-like ATPases CU118_RS03980 SM00433 TopoisomeraseII CU118_RS03985 SM00434 DNA Topoisomerase IV CU118_RS04000 SM01061 CAT RNA binding domain CU118_RS04105 SM00382 ATPases associated with a variety of cellular activities CU118_RS04110 SM00382 ATPases associated with a variety of cellular activities CU118_RS04145 SM00382 ATPases associated with a variety of cellular activities CU118_RS04170 SM00382 ATPases associated with a variety of cellular activities CU118_RS04180 SM00859 Semialdehyde dehydrogenase, NAD binding domain CU118_RS04185 SM01130 CU118_RS04185 CU118_RS04205 SM01005 Alanine racemase, C-terminal domain CU118_RS04225 SM00357 Cold shock protein domain CU118_RS04260 SM00327 von Willebrand factor (vWF) type A domain CU118_RS04285 SM00861 Transketolase, pyrimidine binding domain CU118_RS04290 SM00387 Histidine kinase-like ATPases CU118_RS04290 SM00388 His Kinase A (phosphoacceptor) domain CU118_RS04295 SM00448 cheY-homologous receiver domain CU118_RS04295 SM00862 Transcriptional regulatory protein, C terminal CU118_RS04310 SM00014 Acid phosphatase homologues CU118_RS04325 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CU118_RS04325 SM00245 tail specific protease CU118_RS04370 SM00567 E-Z type HEAT repeats CU118_RS04370 SM00932 Scaffold protein Nfu/NifU N terminal CU118_RS04375 SM00932 Scaffold protein Nfu/NifU N terminal CU118_RS04395 SM00844 GA module CU118_RS04415 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CU118_RS04415 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CU118_RS04420 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CU118_RS04420 SM00475 5'-3' exonuclease CU118_RS04440 SM00981 CU118_RS04440 CU118_RS04485 SM00478 endonuclease III CU118_RS04485 SM00525 CU118_RS04485 CU118_RS04500 SM00479 CU118_RS04500 CU118_RS04500 SM00491 CU118_RS04500 CU118_RS04535 SM00914 CU118_RS04535 CU118_RS04540 SM00028 Tetratricopeptide repeats CU118_RS04560 SM00562 CU118_RS04560 CU118_RS04585 SM00411 bacterial (prokaryotic) histone like domain CU118_RS04600 SM00316 Ribosomal protein S1-like RNA-binding domain CU118_RS04625 SM00870 CU118_RS04625 CU118_RS04640 SM00257 Lysin motif CU118_RS04645 SM00487 DEAD-like helicases superfamily CU118_RS04645 SM00490 helicase superfamily c-terminal domain CU118_RS04690 SM00287 Bacterial SH3 domain homologues CU118_RS04690 SM00646 CU118_RS04690 CU118_RS04755 SM00635 Bacterial Ig-like domain 2 CU118_RS04810 SM00507 HNH nucleases CU118_RS04820 SM00487 DEAD-like helicases superfamily CU118_RS04825 SM00990 CU118_RS04825 CU118_RS04905 SM00482 DNA polymerase A domain CU118_RS04975 SM00530 Helix-turn-helix XRE-family like proteins CU118_RS05020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU118_RS05020 SM00387 Histidine kinase-like ATPases CU118_RS05020 SM00388 His Kinase A (phosphoacceptor) domain CU118_RS05025 SM00448 cheY-homologous receiver domain CU118_RS05025 SM00862 Transcriptional regulatory protein, C terminal CU118_RS05030 SM00363 S4 RNA-binding domain CU118_RS05095 SM00342 helix_turn_helix, arabinose operon control protein CU118_RS05095 SM00871 Bacterial transcription activator, effector binding domain CU118_RS05100 SM00642 Alpha-amylase domain CU118_RS05105 SM00354 helix_turn _helix lactose operon repressor CU118_RS05115 SM01350 CU118_RS05115 CU118_RS05145 SM00861 Transketolase, pyrimidine binding domain CU118_RS05195 SM00878 Biotin carboxylase C-terminal domain CU118_RS05205 SM00841 Elongation factor P, C-terminal CU118_RS05205 SM01185 CU118_RS05205 CU118_RS05230 SM00450 Rhodanese Homology Domain CU118_RS05290 SM00849 Metallo-beta-lactamase superfamily CU118_RS05345 SM00382 ATPases associated with a variety of cellular activities CU118_RS05350 SM00518 AP endonuclease family 2 CU118_RS05355 SM00487 DEAD-like helicases superfamily CU118_RS05355 SM00490 helicase superfamily c-terminal domain CU118_RS05375 SM00400 zinc finger CU118_RS05375 SM00493 CU118_RS05375 CU118_RS05385 SM00116 Domain in cystathionine beta-synthase and other proteins. CU118_RS05445 SM00729 Elongator protein 3, MiaB family, Radical SAM CU118_RS05460 SM00271 DnaJ molecular chaperone homology domain CU118_RS05480 SM00729 Elongator protein 3, MiaB family, Radical SAM CU118_RS05495 SM00838 Elongation factor G C-terminus CU118_RS05510 SM00849 Metallo-beta-lactamase superfamily CU118_RS05520 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CU118_RS05535 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU118_RS05545 SM01103 CU118_RS05545 CU118_RS05595 SM00878 Biotin carboxylase C-terminal domain CU118_RS05605 SM00797 Allophanate hydrolase subunit 2 CU118_RS05610 SM00796 Allophanate hydrolase subunit 1 CU118_RS05645 SM00732 Likely ribonuclease with RNase H fold. CU118_RS05655 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CU118_RS05660 SM00382 ATPases associated with a variety of cellular activities CU118_RS05665 SM00028 Tetratricopeptide repeats CU118_RS05705 SM00382 ATPases associated with a variety of cellular activities CU118_RS05735 SM00287 Bacterial SH3 domain homologues CU118_RS05735 SM00646 CU118_RS05735 CU118_RS05745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU118_RS05745 SM00954 Region found in RelA / SpoT proteins CU118_RS05770 SM01323 CU118_RS05770 CU118_RS05785 SM00382 ATPases associated with a variety of cellular activities CU118_RS05790 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CU118_RS05890 SM01004 Delta-aminolevulinic acid dehydratase CU118_RS05920 SM00382 ATPases associated with a variety of cellular activities CU118_RS05920 SM00994 ClpX C4-type zinc finger CU118_RS05920 SM01086 C-terminal, D2-small domain, of ClpB protein CU118_RS05970 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CU118_RS05995 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CU118_RS06005 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CU118_RS06005 SM01232 CU118_RS06005 CU118_RS06010 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CU118_RS06010 SM00474 3'-5' exonuclease CU118_RS06010 SM00475 5'-3' exonuclease CU118_RS06010 SM00482 DNA polymerase A domain CU118_RS06020 SM00387 Histidine kinase-like ATPases CU118_RS06020 SM00388 His Kinase A (phosphoacceptor) domain CU118_RS06025 SM00448 cheY-homologous receiver domain CU118_RS06025 SM00862 Transcriptional regulatory protein, C terminal CU118_RS06035 SM01329 CU118_RS06035 CU118_RS06070 SM00919 Malic enzyme, NAD binding domain CU118_RS06070 SM01274 CU118_RS06070 CU118_RS06075 SM00481 DNA polymerase alpha chain like domain CU118_RS06085 SM00116 Domain in cystathionine beta-synthase and other proteins. CU118_RS06100 SM00849 Metallo-beta-lactamase superfamily CU118_RS06115 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CU118_RS06115 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CU118_RS06145 SM00981 CU118_RS06145 CU118_RS06165 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CU118_RS06175 SM00363 S4 RNA-binding domain CU118_RS06175 SM01390 CU118_RS06175 CU118_RS06220 SM00563 Phosphate acyltransferases CU118_RS06225 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CU118_RS06230 SM00363 S4 RNA-binding domain CU118_RS06245 SM00725 NEAr Transporter domain CU118_RS06270 SM00354 helix_turn _helix lactose operon repressor CU118_RS06280 SM00830 Chorismate mutase type II CU118_RS06305 SM00843 CU118_RS06305 CU118_RS06335 SM00849 Metallo-beta-lactamase superfamily CU118_RS06365 SM00363 S4 RNA-binding domain CU118_RS06385 SM00450 Rhodanese Homology Domain CU118_RS06400 SM00729 Elongator protein 3, MiaB family, Radical SAM CU118_RS06410 SM00347 helix_turn_helix multiple antibiotic resistance protein CU118_RS06465 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CU118_RS06475 SM00047 Lysozyme subfamily 2 CU118_RS06560 SM01234 CU118_RS06560 CU118_RS06580 SM00894 Excalibur calcium-binding domain CU118_RS06605 SM00382 ATPases associated with a variety of cellular activities CU118_RS06715 SM00287 Bacterial SH3 domain homologues CU118_RS06790 SM00635 Bacterial Ig-like domain 2 CU118_RS06850 SM00507 HNH nucleases CU118_RS06995 SM00530 Helix-turn-helix XRE-family like proteins CU118_RS07000 SM00530 Helix-turn-helix XRE-family like proteins CU118_RS07050 SM00382 ATPases associated with a variety of cellular activities CU118_RS07065 SM01260 CU118_RS07065 CU118_RS07190 SM00382 ATPases associated with a variety of cellular activities CU118_RS07215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU118_RS07250 SM00530 Helix-turn-helix XRE-family like proteins CU118_RS07255 SM00421 helix_turn_helix, Lux Regulon CU118_RS07255 SM00448 cheY-homologous receiver domain CU118_RS07310 SM00382 ATPases associated with a variety of cellular activities CU118_RS07315 SM00062 Bacterial periplasmic substrate-binding proteins CU118_RS07500 SM00382 ATPases associated with a variety of cellular activities CU118_RS07510 SM00478 endonuclease III CU118_RS07580 SM00226 Low molecular weight phosphatase family CU118_RS07595 SM00421 helix_turn_helix, Lux Regulon CU118_RS07595 SM00448 cheY-homologous receiver domain CU118_RS07600 SM00387 Histidine kinase-like ATPases CU118_RS07675 SM00479 CU118_RS07675 CU118_RS07695 SM00046 Diacylglycerol kinase catalytic domain (presumed) CU118_RS07705 SM00845 GatB domain CU118_RS07735 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CU118_RS07735 SM00292 breast cancer carboxy-terminal domain CU118_RS07735 SM00532 Ligase N family CU118_RS07755 SM00998 Adenylosuccinate lyase C-terminus CU118_RS07815 SM00710 Parallel beta-helix repeats CU118_RS07825 SM01131 CU118_RS07825 CU118_RS07885 SM00382 ATPases associated with a variety of cellular activities CU118_RS07895 SM00382 ATPases associated with a variety of cellular activities CU118_RS07900 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU118_RS07965 SM00883 Chaperonin 10 Kd subunit CU118_RS07995 SM00793 Accessory gene regulator B CU118_RS08000 SM00794 Staphylococcal AgrD protein CU118_RS08010 SM00448 cheY-homologous receiver domain CU118_RS08010 SM00850 LytTr DNA-binding domain CU118_RS08025 SM00640 Glycosyl hydrolases family 32 CU118_RS08030 SM00354 helix_turn _helix lactose operon repressor CU118_RS08050 SM00881 CoA binding domain CU118_RS08055 SM00382 ATPases associated with a variety of cellular activities CU118_RS08065 SM00534 ATPase domain of DNA mismatch repair MUTS family CU118_RS08115 SM00917 LeuA allosteric (dimerisation) domain CU118_RS08120 SM01329 CU118_RS08120 CU118_RS08170 SM00731 SprT homologues. CU118_RS08175 SM00316 Ribosomal protein S1-like RNA-binding domain CU118_RS08175 SM00732 Likely ribonuclease with RNase H fold. CU118_RS08195 SM00331 Sigma factor PP2C-like phosphatases CU118_RS08195 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CU118_RS08215 SM01005 Alanine racemase, C-terminal domain CU118_RS08260 SM00387 Histidine kinase-like ATPases CU118_RS08260 SM00388 His Kinase A (phosphoacceptor) domain CU118_RS08265 SM00448 cheY-homologous receiver domain CU118_RS08265 SM00862 Transcriptional regulatory protein, C terminal CU118_RS08270 SM00487 DEAD-like helicases superfamily CU118_RS08270 SM00490 helicase superfamily c-terminal domain CU118_RS08305 SM00155 Phospholipase D. Active site motifs. CU118_RS08310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CU118_RS08395 SM00382 ATPases associated with a variety of cellular activities CU118_RS08455 SM00226 Low molecular weight phosphatase family CU118_RS08470 SM00937 CU118_RS08470 CU118_RS08490 SM00357 Cold shock protein domain CU118_RS08490 SM00382 ATPases associated with a variety of cellular activities CU118_RS08490 SM00959 Rho termination factor, N-terminal domain CU118_RS08565 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CU118_RS08575 SM01133 CU118_RS08575 CU118_RS08615 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CU118_RS08640 SM00382 ATPases associated with a variety of cellular activities CU118_RS08850 SM00829 Enoylreductase CU118_RS08855 SM00829 Enoylreductase CU118_RS08880 SM01133 CU118_RS08880 CU118_RS08895 SM00420 helix_turn_helix, Deoxyribose operon repressor CU118_RS08895 SM01134 CU118_RS08895 CU118_RS09010 SM00382 ATPases associated with a variety of cellular activities CU118_RS09015 SM00382 ATPases associated with a variety of cellular activities CU118_RS09025 SM00662 RNA polymerases D CU118_RS09045 SM00316 Ribosomal protein S1-like RNA-binding domain CU118_RS09100 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CU118_RS09105 SM01374 CU118_RS09105 CU118_RS09125 SM00322 K homology RNA-binding domain CU118_RS09140 SM01382 CU118_RS09140 CU118_RS09140 SM01383 CU118_RS09140 CU118_RS09160 SM01403 CU118_RS09160 CU118_RS09175 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CU118_RS09175 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CU118_RS09175 SM00493 CU118_RS09175 CU118_RS09235 SM00347 helix_turn_helix multiple antibiotic resistance protein CU118_RS09260 SM00729 Elongator protein 3, MiaB family, Radical SAM CU118_RS09285 SM00852 Probable molybdopterin binding domain CU118_RS09295 SM00852 Probable molybdopterin binding domain CU118_RS09305 SM00382 ATPases associated with a variety of cellular activities CU118_RS09370 SM00988 UreE urease accessory protein, N-terminal domain CU118_RS09410 SM00342 helix_turn_helix, arabinose operon control protein CU118_RS09460 SM00047 Lysozyme subfamily 2 CU118_RS09475 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CU118_RS09475 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CU118_RS09490 SM00420 helix_turn_helix, Deoxyribose operon repressor CU118_RS09635 SM00382 ATPases associated with a variety of cellular activities CU118_RS09720 SM00347 helix_turn_helix multiple antibiotic resistance protein CU118_RS09730 SM00382 ATPases associated with a variety of cellular activities CU118_RS09740 SM00448 cheY-homologous receiver domain CU118_RS09740 SM00862 Transcriptional regulatory protein, C terminal CU118_RS09745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU118_RS09745 SM00387 Histidine kinase-like ATPases CU118_RS09745 SM00388 His Kinase A (phosphoacceptor) domain CU118_RS09750 SM00850 LytTr DNA-binding domain CU118_RS09765 SM00382 ATPases associated with a variety of cellular activities CU118_RS09800 SM00829 Enoylreductase CU118_RS09855 SM00342 helix_turn_helix, arabinose operon control protein CU118_RS09880 SM00347 helix_turn_helix multiple antibiotic resistance protein CU118_RS09900 SM00422 helix_turn_helix, mercury resistance CU118_RS09905 SM00421 helix_turn_helix, Lux Regulon CU118_RS09905 SM00448 cheY-homologous receiver domain CU118_RS09910 SM00387 Histidine kinase-like ATPases CU118_RS09935 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CU118_RS10020 SM00382 ATPases associated with a variety of cellular activities CU118_RS10030 SM00062 Bacterial periplasmic substrate-binding proteins CU118_RS10030 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CU118_RS10050 SM00855 Phosphoglycerate mutase family CU118_RS10105 SM00729 Elongator protein 3, MiaB family, Radical SAM CU118_RS10105 SM00876 Biotin and Thiamin Synthesis associated domain CU118_RS10155 SM00871 Bacterial transcription activator, effector binding domain CU118_RS10235 SM00116 Domain in cystathionine beta-synthase and other proteins. CU118_RS10235 SM00382 ATPases associated with a variety of cellular activities CU118_RS10275 SM00382 ATPases associated with a variety of cellular activities CU118_RS10320 SM00382 ATPases associated with a variety of cellular activities CU118_RS10325 SM00382 ATPases associated with a variety of cellular activities CU118_RS10450 SM00487 DEAD-like helicases superfamily CU118_RS10450 SM00490 helicase superfamily c-terminal domain CU118_RS10515 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU118_RS10515 SM00895 CU118_RS10515 CU118_RS10520 SM00422 helix_turn_helix, mercury resistance CU118_RS10525 SM00954 Region found in RelA / SpoT proteins CU118_RS10565 SM00347 helix_turn_helix multiple antibiotic resistance protein CU118_RS10580 SM00382 ATPases associated with a variety of cellular activities CU118_RS10610 SM00347 helix_turn_helix multiple antibiotic resistance protein CU118_RS10640 SM00382 ATPases associated with a variety of cellular activities CU118_RS10765 SM00382 ATPases associated with a variety of cellular activities CU118_RS10765 SM01086 C-terminal, D2-small domain, of ClpB protein CU118_RS10780 SM00899 CU118_RS10780 CU118_RS10810 SM01266 CU118_RS10810 CU118_RS10985 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CU118_RS11165 SM00382 ATPases associated with a variety of cellular activities CU118_RS11170 SM00387 Histidine kinase-like ATPases CU118_RS11175 SM00448 cheY-homologous receiver domain CU118_RS11175 SM00862 Transcriptional regulatory protein, C terminal CU118_RS11185 SM00098 Alkaline phosphatase homologues CU118_RS11195 SM00347 helix_turn_helix multiple antibiotic resistance protein CU118_RS11280 SM00047 Lysozyme subfamily 2 CU118_RS11305 SM00957 SecA DEAD-like domain CU118_RS11305 SM00958 SecA preprotein cross-linking domain CU118_RS11335 SM00903 Flavin reductase like domain CU118_RS11365 SM00903 Flavin reductase like domain CU118_RS11495 SM00867 YceI-like domain CU118_RS11505 SM00450 Rhodanese Homology Domain CU118_RS11565 SM00382 ATPases associated with a variety of cellular activities CU118_RS11580 SM00014 Acid phosphatase homologues CU118_RS11585 SM00357 Cold shock protein domain CU118_RS11590 SM00530 Helix-turn-helix XRE-family like proteins CU118_RS11605 SM00470 ParB-like nuclease domain CU118_RS11615 SM01228 CU118_RS11615 CU118_RS11635 SM00382 ATPases associated with a variety of cellular activities CU118_RS11635 SM00760 Bacterial dnaA protein helix-turn-helix domain CU118_RS11640 SM00480 DNA polymerase III beta subunit CU118_RS11655 SM00387 Histidine kinase-like ATPases CU118_RS11655 SM00433 TopoisomeraseII CU118_RS11660 SM00434 DNA Topoisomerase IV CU118_RS11705 SM00267 diguanylate cyclase CU118_RS11725 SM00788 Adenylosuccinate synthetase CU118_RS11740 SM00448 cheY-homologous receiver domain CU118_RS11740 SM00862 Transcriptional regulatory protein, C terminal CU118_RS11745 SM00091 PAS domain CU118_RS11745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CU118_RS11745 SM00387 Histidine kinase-like ATPases CU118_RS11745 SM00388 His Kinase A (phosphoacceptor) domain CU118_RS11760 SM00849 Metallo-beta-lactamase superfamily CU118_RS11780 SM00530 Helix-turn-helix XRE-family like proteins CU118_RS11820 SM00857 Resolvase, N terminal domain CU118_RS11980 SM00148 Phospholipase C, catalytic domain (part); domain X CU118_RS11990 SM00342 helix_turn_helix, arabinose operon control protein CU118_RS12025 SM00257 Lysin motif CU118_RS12035 SM00347 helix_turn_helix multiple antibiotic resistance protein CU118_RS12095 SM00470 ParB-like nuclease domain CU118_RS12115 SM00822 CU118_RS12115 CU118_RS12155 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU118_RS12175 SM01133 CU118_RS12175 CU118_RS12195 SM00382 ATPases associated with a variety of cellular activities CU118_RS12200 SM00062 Bacterial periplasmic substrate-binding proteins CU118_RS12295 SM00984 UDP binding domain CU118_RS12340 SM00382 ATPases associated with a variety of cellular activities CU118_RS12365 SM00823 Phosphopantetheine attachment site CU118_RS12390 SM00859 Semialdehyde dehydrogenase, NAD binding domain CU118_RS12450 SM00487 DEAD-like helicases superfamily CU118_RS12470 SM00382 ATPases associated with a variety of cellular activities CU118_RS12510 SM00382 ATPases associated with a variety of cellular activities CU118_RS12555 SM00342 helix_turn_helix, arabinose operon control protein CU118_RS12555 SM00448 cheY-homologous receiver domain CU118_RS12620 SM00882 Coenzyme A transferase CU118_RS12705 SM00829 Enoylreductase CU118_RS12715 SM00829 Enoylreductase CU118_RS12765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CU118_RS12765 SM00387 Histidine kinase-like ATPases CU118_RS12770 SM00448 cheY-homologous receiver domain CU118_RS12770 SM00850 LytTr DNA-binding domain CU118_RS12785 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU118_RS12785 SM00866 CU118_RS12785 CU118_RS12830 SM00354 helix_turn _helix lactose operon repressor CU118_RS12855 SM00382 ATPases associated with a variety of cellular activities CU118_RS13085 SM01130 CU118_RS13085 CU118_RS13140 SM00506 Appr-1"-p processing enzyme CU118_RS13180 SM00347 helix_turn_helix multiple antibiotic resistance protein CU118_RS13265 SM00530 Helix-turn-helix XRE-family like proteins CU118_RS13275 SM00382 ATPases associated with a variety of cellular activities CU118_RS13320 SM00470 ParB-like nuclease domain CU118_RS13395 SM00855 Phosphoglycerate mutase family CU118_RS13470 SM00116 Domain in cystathionine beta-synthase and other proteins. CU118_RS13470 SM01240 CU118_RS13470 CU118_RS13615 SM00833 Cobalamin synthesis protein cobW C-terminal domain CU118_RS13660 SM00014 Acid phosphatase homologues CU118_RS13685 SM00382 ATPases associated with a variety of cellular activities CU118_RS13685 SM00930 CU118_RS13685 CU118_RS13700 SM00257 Lysin motif CU118_RS13755 SM00642 Alpha-amylase domain CU118_RS13760 SM00345 helix_turn_helix gluconate operon transcriptional repressor CU118_RS13760 SM00866 CU118_RS13760 CU118_RS13780 SM00382 ATPases associated with a variety of cellular activities CU118_RS13790 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CU118_RS13790 SM00493 CU118_RS13790 CU118_RS13850 SM00465 GIY-YIG type nucleases (URI domain) CU118_RS13870 SM00493 CU118_RS13870 CU118_RS13875 SM00650 Ribosomal RNA adenine dimethylases CU118_RS13915 SM01400 CU118_RS13915 CU118_RS13935 SM00487 DEAD-like helicases superfamily CU118_RS13935 SM00490 helicase superfamily c-terminal domain CU118_RS13935 SM00982 CU118_RS13935 CU118_RS13935 SM01058 CarD-like/TRCF domain CU118_RS13950 SM00363 S4 RNA-binding domain CU118_RS13960 SM00316 Ribosomal protein S1-like RNA-binding domain CU118_RS13965 SM00977 TilS substrate C-terminal domain CU118_RS13975 SM00382 ATPases associated with a variety of cellular activities CU118_RS13995 SM00905 Dihydroneopterin aldolase CU118_RS14080 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CU118_RS14115 SM00530 Helix-turn-helix XRE-family like proteins CU118_RS14135 SM00382 ATPases associated with a variety of cellular activities CU118_RS14155 SM00857 Resolvase, N terminal domain CU118_RS14180 SM00857 Resolvase, N terminal domain