RM27_RS00005 SM00382 ATPases associated with a variety of cellular activities RM27_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain RM27_RS00010 SM00480 DNA polymerase III beta subunit RM27_RS00025 SM00387 Histidine kinase-like ATPases RM27_RS00025 SM00433 TopoisomeraseII RM27_RS00030 SM00434 DNA Topoisomerase IV RM27_RS00070 SM00267 diguanylate cyclase RM27_RS00085 SM00788 Adenylosuccinate synthetase RM27_RS00100 SM00448 cheY-homologous receiver domain RM27_RS00100 SM00862 Transcriptional regulatory protein, C terminal RM27_RS00105 SM00091 PAS domain RM27_RS00105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RM27_RS00105 SM00387 Histidine kinase-like ATPases RM27_RS00105 SM00388 His Kinase A (phosphoacceptor) domain RM27_RS00120 SM00849 Metallo-beta-lactamase superfamily RM27_RS00195 SM00857 Resolvase, N terminal domain RM27_RS00200 SM00857 Resolvase, N terminal domain RM27_RS00225 SM00450 Rhodanese Homology Domain RM27_RS00230 SM00849 Metallo-beta-lactamase superfamily RM27_RS00275 SM00829 Enoylreductase RM27_RS00375 SM00382 ATPases associated with a variety of cellular activities RM27_RS00380 SM00382 ATPases associated with a variety of cellular activities RM27_RS00415 SM00450 Rhodanese Homology Domain RM27_RS00420 SM00450 Rhodanese Homology Domain RM27_RS00420 SM00849 Metallo-beta-lactamase superfamily RM27_RS00485 SM00148 Phospholipase C, catalytic domain (part); domain X RM27_RS00510 SM00342 helix_turn_helix, arabinose operon control protein RM27_RS00540 SM00345 helix_turn_helix gluconate operon transcriptional repressor RM27_RS00555 SM00257 Lysin motif RM27_RS00560 SM00347 helix_turn_helix multiple antibiotic resistance protein RM27_RS00620 SM00470 ParB-like nuclease domain RM27_RS00635 SM00822 RM27_RS00635 RM27_RS00675 SM00345 helix_turn_helix gluconate operon transcriptional repressor RM27_RS00690 SM01133 RM27_RS00690 RM27_RS00710 SM00382 ATPases associated with a variety of cellular activities RM27_RS00715 SM00062 Bacterial periplasmic substrate-binding proteins RM27_RS00830 SM00984 UDP binding domain RM27_RS00870 SM00382 ATPases associated with a variety of cellular activities RM27_RS00930 SM00859 Semialdehyde dehydrogenase, NAD binding domain RM27_RS00980 SM00487 DEAD-like helicases superfamily RM27_RS01000 SM00382 ATPases associated with a variety of cellular activities RM27_RS01040 SM00382 ATPases associated with a variety of cellular activities RM27_RS01085 SM00342 helix_turn_helix, arabinose operon control protein RM27_RS01085 SM00448 cheY-homologous receiver domain RM27_RS01150 SM00882 Coenzyme A transferase RM27_RS01215 SM00829 Enoylreductase RM27_RS01220 SM00829 Enoylreductase RM27_RS01270 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RM27_RS01270 SM00387 Histidine kinase-like ATPases RM27_RS01275 SM00448 cheY-homologous receiver domain RM27_RS01275 SM00850 LytTr DNA-binding domain RM27_RS01290 SM00345 helix_turn_helix gluconate operon transcriptional repressor RM27_RS01290 SM00866 RM27_RS01290 RM27_RS01330 SM00354 helix_turn _helix lactose operon repressor RM27_RS01365 SM00382 ATPases associated with a variety of cellular activities RM27_RS01555 SM00382 ATPases associated with a variety of cellular activities RM27_RS01585 SM01130 RM27_RS01585 RM27_RS01635 SM00506 Appr-1"-p processing enzyme RM27_RS01675 SM00347 helix_turn_helix multiple antibiotic resistance protein RM27_RS01755 SM00530 Helix-turn-helix XRE-family like proteins RM27_RS01765 SM00382 ATPases associated with a variety of cellular activities RM27_RS01810 SM00470 ParB-like nuclease domain RM27_RS01895 SM00855 Phosphoglycerate mutase family RM27_RS01960 SM00116 Domain in cystathionine beta-synthase and other proteins. RM27_RS01960 SM01240 RM27_RS01960 RM27_RS02140 SM00833 Cobalamin synthesis protein cobW C-terminal domain RM27_RS02160 SM00014 Acid phosphatase homologues RM27_RS02185 SM00382 ATPases associated with a variety of cellular activities RM27_RS02185 SM00930 RM27_RS02185 RM27_RS02200 SM00257 Lysin motif RM27_RS02255 SM00642 Alpha-amylase domain RM27_RS02260 SM00345 helix_turn_helix gluconate operon transcriptional repressor RM27_RS02260 SM00866 RM27_RS02260 RM27_RS02270 SM00382 ATPases associated with a variety of cellular activities RM27_RS02280 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RM27_RS02280 SM00493 RM27_RS02280 RM27_RS02335 SM00465 GIY-YIG type nucleases (URI domain) RM27_RS02355 SM00493 RM27_RS02355 RM27_RS02360 SM00650 Ribosomal RNA adenine dimethylases RM27_RS02395 SM01400 RM27_RS02395 RM27_RS02410 SM00487 DEAD-like helicases superfamily RM27_RS02410 SM00490 helicase superfamily c-terminal domain RM27_RS02410 SM00982 RM27_RS02410 RM27_RS02410 SM01058 CarD-like/TRCF domain RM27_RS02425 SM00363 S4 RNA-binding domain RM27_RS02435 SM00316 Ribosomal protein S1-like RNA-binding domain RM27_RS02440 SM00977 TilS substrate C-terminal domain RM27_RS02450 SM00382 ATPases associated with a variety of cellular activities RM27_RS02470 SM00905 Dihydroneopterin aldolase RM27_RS02515 SM00345 helix_turn_helix gluconate operon transcriptional repressor RM27_RS02550 SM00382 ATPases associated with a variety of cellular activities RM27_RS02550 SM01086 C-terminal, D2-small domain, of ClpB protein RM27_RS02555 SM00382 ATPases associated with a variety of cellular activities RM27_RS02560 SM00670 Large family of predicted nucleotide-binding domains RM27_RS02575 SM00840 RM27_RS02575 RM27_RS02585 SM00967 RNA 2'-O ribose methyltransferase substrate binding RM27_RS02605 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RM27_RS02605 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RM27_RS02610 SM00649 Ribosomal protein L11/L12 RM27_RS02640 SM00663 RNA polymerase I subunit A N-terminus RM27_RS02660 SM00838 Elongation factor G C-terminus RM27_RS02660 SM00889 Elongation factor G, domain IV RM27_RS02775 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RM27_RS02825 SM00986 Uracil DNA glycosylase superfamily RM27_RS02825 SM00987 UreE urease accessory protein, C-terminal domain RM27_RS02980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RM27_RS02990 SM00829 Enoylreductase RM27_RS03000 SM00836 DALR anticodon binding domain RM27_RS03000 SM01016 Arginyl tRNA synthetase N terminal dom RM27_RS03005 SM00478 endonuclease III RM27_RS03120 SM00382 ATPases associated with a variety of cellular activities RM27_RS03125 SM00529 Helix-turn-helix diphteria tox regulatory element RM27_RS03125 SM00899 RM27_RS03125 RM27_RS03140 SM00382 ATPases associated with a variety of cellular activities RM27_RS03170 SM00382 ATPases associated with a variety of cellular activities RM27_RS03185 SM00382 ATPases associated with a variety of cellular activities RM27_RS03205 SM01120 RM27_RS03205 RM27_RS03245 SM00448 cheY-homologous receiver domain RM27_RS03245 SM00862 Transcriptional regulatory protein, C terminal RM27_RS03250 SM00387 Histidine kinase-like ATPases RM27_RS03255 SM00382 ATPases associated with a variety of cellular activities RM27_RS03275 SM00257 Lysin motif RM27_RS03285 SM00342 helix_turn_helix, arabinose operon control protein RM27_RS03370 SM00382 ATPases associated with a variety of cellular activities RM27_RS03375 SM00382 ATPases associated with a variety of cellular activities RM27_RS03380 SM00347 helix_turn_helix multiple antibiotic resistance protein RM27_RS03385 SM00833 Cobalamin synthesis protein cobW C-terminal domain RM27_RS03440 SM00420 helix_turn_helix, Deoxyribose operon repressor RM27_RS03440 SM01134 RM27_RS03440 RM27_RS03460 SM01091 Transporter associated domain RM27_RS03475 SM00387 Histidine kinase-like ATPases RM27_RS03475 SM00388 His Kinase A (phosphoacceptor) domain RM27_RS03480 SM00448 cheY-homologous receiver domain RM27_RS03480 SM00862 Transcriptional regulatory protein, C terminal RM27_RS03530 SM00796 Allophanate hydrolase subunit 1 RM27_RS03535 SM00797 Allophanate hydrolase subunit 2 RM27_RS03545 SM00382 ATPases associated with a variety of cellular activities RM27_RS03550 SM00341 Helicase and RNase D C-terminal RM27_RS03550 SM00487 DEAD-like helicases superfamily RM27_RS03550 SM00490 helicase superfamily c-terminal domain RM27_RS03550 SM00956 RM27_RS03550 RM27_RS03555 SM00382 ATPases associated with a variety of cellular activities RM27_RS03575 SM00046 Diacylglycerol kinase catalytic domain (presumed) RM27_RS03620 SM00382 ATPases associated with a variety of cellular activities RM27_RS03675 SM00267 diguanylate cyclase RM27_RS03695 SM00487 DEAD-like helicases superfamily RM27_RS03695 SM00490 helicase superfamily c-terminal domain RM27_RS03710 SM00957 SecA DEAD-like domain RM27_RS03710 SM00958 SecA preprotein cross-linking domain RM27_RS03715 SM00937 RM27_RS03715 RM27_RS03720 SM00257 Lysin motif RM27_RS03735 SM00487 DEAD-like helicases superfamily RM27_RS03735 SM00490 helicase superfamily c-terminal domain RM27_RS03760 SM00028 Tetratricopeptide repeats RM27_RS03815 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RM27_RS03835 SM01192 RM27_RS03835 RM27_RS03835 SM01193 RM27_RS03835 RM27_RS03855 SM00316 Ribosomal protein S1-like RNA-binding domain RM27_RS03855 SM00357 Cold shock protein domain RM27_RS03855 SM00955 RM27_RS03855 RM27_RS03905 SM00318 Staphylococcal nuclease homologues RM27_RS03910 SM00357 Cold shock protein domain RM27_RS03950 SM00855 Phosphoglycerate mutase family RM27_RS04000 SM00493 RM27_RS04000 RM27_RS04010 SM00382 ATPases associated with a variety of cellular activities RM27_RS04010 SM00930 RM27_RS04010 RM27_RS04045 SM00530 Helix-turn-helix XRE-family like proteins RM27_RS04050 SM00530 Helix-turn-helix XRE-family like proteins RM27_RS04075 SM00885 D5 N terminal like RM27_RS04120 SM00382 ATPases associated with a variety of cellular activities RM27_RS04175 SM00729 Elongator protein 3, MiaB family, Radical SAM RM27_RS04315 SM01298 RM27_RS04315 RM27_RS04325 SM00316 Ribosomal protein S1-like RNA-binding domain RM27_RS04340 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RM27_RS04425 SM00382 ATPases associated with a variety of cellular activities RM27_RS04425 SM01086 C-terminal, D2-small domain, of ClpB protein RM27_RS04470 SM00825 Beta-ketoacyl synthase RM27_RS04490 SM00382 ATPases associated with a variety of cellular activities RM27_RS04495 SM00382 ATPases associated with a variety of cellular activities RM27_RS04510 SM00382 ATPases associated with a variety of cellular activities RM27_RS04515 SM00382 ATPases associated with a variety of cellular activities RM27_RS04570 SM01118 RM27_RS04570 RM27_RS04580 SM00954 Region found in RelA / SpoT proteins RM27_RS04595 SM00116 Domain in cystathionine beta-synthase and other proteins. RM27_RS04595 SM00924 MgtE intracellular N domain RM27_RS04660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RM27_RS04690 SM00914 RM27_RS04690 RM27_RS04715 SM00382 ATPases associated with a variety of cellular activities RM27_RS04805 SM00347 helix_turn_helix multiple antibiotic resistance protein RM27_RS04810 SM00047 Lysozyme subfamily 2 RM27_RS04810 SM00644 RM27_RS04810 RM27_RS04865 SM01001 AIR carboxylase RM27_RS04885 SM01211 RM27_RS04885 RM27_RS04910 SM00798 AICARFT/IMPCHase bienzyme RM27_RS04910 SM00851 MGS-like domain RM27_RS04915 SM01209 RM27_RS04915 RM27_RS04915 SM01210 RM27_RS04915 RM27_RS04925 SM00382 ATPases associated with a variety of cellular activities RM27_RS04980 SM00849 Metallo-beta-lactamase superfamily RM27_RS05005 SM00861 Transketolase, pyrimidine binding domain RM27_RS05025 SM00530 Helix-turn-helix XRE-family like proteins RM27_RS05030 SM00382 ATPases associated with a variety of cellular activities RM27_RS05080 SM00838 Elongation factor G C-terminus RM27_RS05100 SM00878 Biotin carboxylase C-terminal domain RM27_RS05170 SM00725 NEAr Transporter domain RM27_RS05175 SM00725 NEAr Transporter domain RM27_RS05180 SM00725 NEAr Transporter domain RM27_RS05210 SM00967 RNA 2'-O ribose methyltransferase substrate binding RM27_RS05220 SM00873 B3/4 domain RM27_RS05220 SM00874 tRNA synthetase B5 domain RM27_RS05220 SM00896 Ferredoxin-fold anticodon binding domain RM27_RS05240 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RM27_RS05240 SM00481 DNA polymerase alpha chain like domain RM27_RS05240 SM00483 DNA polymerase X family RM27_RS05245 SM00463 Small MutS-related domain RM27_RS05245 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RM27_RS05245 SM00534 ATPase domain of DNA mismatch repair MUTS family RM27_RS05255 SM00465 GIY-YIG type nucleases (URI domain) RM27_RS05435 SM00740 RM27_RS05435 RM27_RS05455 SM00842 Cell division protein FtsA RM27_RS05460 SM00864 Tubulin/FtsZ family, GTPase domain RM27_RS05460 SM00865 Tubulin/FtsZ family, C-terminal domain RM27_RS05485 SM00363 S4 RNA-binding domain RM27_RS05515 SM00363 S4 RNA-binding domain RM27_RS05540 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RM27_RS05545 SM00851 MGS-like domain RM27_RS05545 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RM27_RS05545 SM01209 RM27_RS05545 RM27_RS05550 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RM27_RS05575 SM00072 Guanylate kinase homologues. RM27_RS05580 SM01409 RM27_RS05580 RM27_RS05590 SM00487 DEAD-like helicases superfamily RM27_RS05590 SM00490 helicase superfamily c-terminal domain RM27_RS05625 SM00331 Sigma factor PP2C-like phosphatases RM27_RS05625 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain RM27_RS05630 SM00220 Serine/Threonine protein kinases, catalytic domain RM27_RS05630 SM00740 RM27_RS05630 RM27_RS05645 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain RM27_RS05660 SM01120 RM27_RS05660 RM27_RS05660 SM01121 RM27_RS05660 RM27_RS05665 SM00487 DEAD-like helicases superfamily RM27_RS05665 SM00490 helicase superfamily c-terminal domain RM27_RS05680 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RM27_RS05685 SM00822 RM27_RS05685 RM27_RS05695 SM00358 Double-stranded RNA binding motif RM27_RS05695 SM00535 Ribonuclease III family RM27_RS05700 SM00968 SMC proteins Flexible Hinge Domain RM27_RS05705 SM00382 ATPases associated with a variety of cellular activities RM27_RS05705 SM00962 SRP54-type protein, GTPase domain RM27_RS05705 SM00963 SRP54-type protein, helical bundle domain RM27_RS05715 SM00382 ATPases associated with a variety of cellular activities RM27_RS05715 SM00962 SRP54-type protein, GTPase domain RM27_RS05715 SM00963 SRP54-type protein, helical bundle domain RM27_RS05760 SM00881 CoA binding domain RM27_RS05765 SM00257 Lysin motif RM27_RS05780 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RM27_RS05780 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RM27_RS05780 SM00493 RM27_RS05780 RM27_RS05800 SM00382 ATPases associated with a variety of cellular activities RM27_RS05800 SM01086 C-terminal, D2-small domain, of ClpB protein RM27_RS05850 SM00479 RM27_RS05850 RM27_RS05850 SM00481 DNA polymerase alpha chain like domain RM27_RS05860 SM00316 Ribosomal protein S1-like RNA-binding domain RM27_RS05860 SM00322 K homology RNA-binding domain RM27_RS05890 SM00904 Riboflavin kinase RM27_RS05895 SM01387 RM27_RS05895 RM27_RS05900 SM00316 Ribosomal protein S1-like RNA-binding domain RM27_RS05900 SM00322 K homology RNA-binding domain RM27_RS05905 SM00849 Metallo-beta-lactamase superfamily RM27_RS05910 SM00382 ATPases associated with a variety of cellular activities RM27_RS05910 SM00843 RM27_RS05910 RM27_RS05915 SM00345 helix_turn_helix gluconate operon transcriptional repressor RM27_RS05915 SM00866 RM27_RS05915 RM27_RS05940 SM00530 Helix-turn-helix XRE-family like proteins RM27_RS05950 SM00852 Probable molybdopterin binding domain RM27_RS05955 SM00382 ATPases associated with a variety of cellular activities RM27_RS05960 SM00322 K homology RNA-binding domain RM27_RS05960 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RM27_RS05990 SM00729 Elongator protein 3, MiaB family, Radical SAM RM27_RS06005 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RM27_RS06005 SM00534 ATPase domain of DNA mismatch repair MUTS family RM27_RS06010 SM00853 MutL C terminal dimerisation domain RM27_RS06010 SM01340 RM27_RS06010 RM27_RS06065 SM00422 helix_turn_helix, mercury resistance RM27_RS06070 SM01230 RM27_RS06070 RM27_RS06135 SM00155 Phospholipase D. Active site motifs. RM27_RS06140 SM00382 ATPases associated with a variety of cellular activities RM27_RS06155 SM00421 helix_turn_helix, Lux Regulon RM27_RS06155 SM00448 cheY-homologous receiver domain RM27_RS06165 SM00318 Staphylococcal nuclease homologues RM27_RS06215 SM01060 RM27_RS06215 RM27_RS06230 SM01240 RM27_RS06230 RM27_RS06255 SM00861 Transketolase, pyrimidine binding domain RM27_RS06305 SM01207 RM27_RS06305 RM27_RS06310 SM00387 Histidine kinase-like ATPases RM27_RS06310 SM00433 TopoisomeraseII RM27_RS06315 SM00434 DNA Topoisomerase IV RM27_RS06325 SM01061 CAT RNA binding domain RM27_RS06425 SM00382 ATPases associated with a variety of cellular activities RM27_RS06430 SM00382 ATPases associated with a variety of cellular activities RM27_RS06460 SM00382 ATPases associated with a variety of cellular activities RM27_RS06490 SM00382 ATPases associated with a variety of cellular activities RM27_RS06500 SM00859 Semialdehyde dehydrogenase, NAD binding domain RM27_RS06505 SM01130 RM27_RS06505 RM27_RS06525 SM01005 Alanine racemase, C-terminal domain RM27_RS06540 SM00357 Cold shock protein domain RM27_RS06580 SM00327 von Willebrand factor (vWF) type A domain RM27_RS06605 SM00861 Transketolase, pyrimidine binding domain RM27_RS06610 SM00387 Histidine kinase-like ATPases RM27_RS06610 SM00388 His Kinase A (phosphoacceptor) domain RM27_RS06615 SM00448 cheY-homologous receiver domain RM27_RS06615 SM00862 Transcriptional regulatory protein, C terminal RM27_RS06625 SM01321 RM27_RS06625 RM27_RS06630 SM00014 Acid phosphatase homologues RM27_RS06645 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RM27_RS06645 SM00245 tail specific protease RM27_RS06690 SM00567 E-Z type HEAT repeats RM27_RS06690 SM00932 Scaffold protein Nfu/NifU N terminal RM27_RS06695 SM00932 Scaffold protein Nfu/NifU N terminal RM27_RS06710 SM00844 GA module RM27_RS06730 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RM27_RS06730 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RM27_RS06735 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RM27_RS06735 SM00475 5'-3' exonuclease RM27_RS06755 SM00981 RM27_RS06755 RM27_RS06790 SM00478 endonuclease III RM27_RS06790 SM00525 RM27_RS06790 RM27_RS06805 SM00479 RM27_RS06805 RM27_RS06805 SM00491 RM27_RS06805 RM27_RS06840 SM00914 RM27_RS06840 RM27_RS06845 SM00028 Tetratricopeptide repeats RM27_RS06870 SM00562 RM27_RS06870 RM27_RS06890 SM00411 bacterial (prokaryotic) histone like domain RM27_RS06905 SM00316 Ribosomal protein S1-like RNA-binding domain RM27_RS06915 SM00870 RM27_RS06915 RM27_RS06925 SM00257 Lysin motif RM27_RS06930 SM00487 DEAD-like helicases superfamily RM27_RS06930 SM00490 helicase superfamily c-terminal domain RM27_RS06985 SM00287 Bacterial SH3 domain homologues RM27_RS06985 SM00646 RM27_RS06985 RM27_RS07050 SM00635 Bacterial Ig-like domain 2 RM27_RS07105 SM00507 HNH nucleases RM27_RS07115 SM00487 DEAD-like helicases superfamily RM27_RS07120 SM00990 RM27_RS07120 RM27_RS07195 SM00482 DNA polymerase A domain RM27_RS07245 SM00530 Helix-turn-helix XRE-family like proteins RM27_RS07250 SM00530 Helix-turn-helix XRE-family like proteins RM27_RS07290 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RM27_RS07290 SM00387 Histidine kinase-like ATPases RM27_RS07290 SM00388 His Kinase A (phosphoacceptor) domain RM27_RS07295 SM00448 cheY-homologous receiver domain RM27_RS07295 SM00862 Transcriptional regulatory protein, C terminal RM27_RS07300 SM00363 S4 RNA-binding domain RM27_RS07365 SM00342 helix_turn_helix, arabinose operon control protein RM27_RS07365 SM00871 Bacterial transcription activator, effector binding domain RM27_RS07370 SM00642 Alpha-amylase domain RM27_RS07375 SM00354 helix_turn _helix lactose operon repressor RM27_RS07385 SM01350 RM27_RS07385 RM27_RS07415 SM00861 Transketolase, pyrimidine binding domain RM27_RS07465 SM00878 Biotin carboxylase C-terminal domain RM27_RS07550 SM00841 Elongation factor P, C-terminal RM27_RS07550 SM01185 RM27_RS07550 RM27_RS07575 SM00450 Rhodanese Homology Domain RM27_RS07630 SM00849 Metallo-beta-lactamase superfamily RM27_RS07685 SM00382 ATPases associated with a variety of cellular activities RM27_RS07690 SM00518 AP endonuclease family 2 RM27_RS07695 SM00487 DEAD-like helicases superfamily RM27_RS07695 SM00490 helicase superfamily c-terminal domain RM27_RS07715 SM00400 zinc finger RM27_RS07715 SM00493 RM27_RS07715 RM27_RS07725 SM00116 Domain in cystathionine beta-synthase and other proteins. RM27_RS07785 SM00729 Elongator protein 3, MiaB family, Radical SAM RM27_RS07800 SM00271 DnaJ molecular chaperone homology domain RM27_RS07820 SM00729 Elongator protein 3, MiaB family, Radical SAM RM27_RS07825 SM00838 Elongation factor G C-terminus RM27_RS07840 SM00849 Metallo-beta-lactamase superfamily RM27_RS07850 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RM27_RS07865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RM27_RS07875 SM01103 RM27_RS07875 RM27_RS07925 SM00878 Biotin carboxylase C-terminal domain RM27_RS07935 SM00797 Allophanate hydrolase subunit 2 RM27_RS07940 SM00796 Allophanate hydrolase subunit 1 RM27_RS07975 SM00732 Likely ribonuclease with RNase H fold. RM27_RS07985 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RM27_RS07990 SM00382 ATPases associated with a variety of cellular activities RM27_RS07995 SM00028 Tetratricopeptide repeats RM27_RS08025 SM00382 ATPases associated with a variety of cellular activities RM27_RS08045 SM00287 Bacterial SH3 domain homologues RM27_RS08045 SM00646 RM27_RS08045 RM27_RS08055 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RM27_RS08055 SM00954 Region found in RelA / SpoT proteins RM27_RS08075 SM01323 RM27_RS08075 RM27_RS08090 SM00382 ATPases associated with a variety of cellular activities RM27_RS08095 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RM27_RS08180 SM01004 Delta-aminolevulinic acid dehydratase RM27_RS08210 SM00382 ATPases associated with a variety of cellular activities RM27_RS08210 SM00994 ClpX C4-type zinc finger RM27_RS08210 SM01086 C-terminal, D2-small domain, of ClpB protein RM27_RS08250 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RM27_RS08270 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RM27_RS08280 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RM27_RS08280 SM01232 RM27_RS08280 RM27_RS08285 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RM27_RS08285 SM00474 3'-5' exonuclease RM27_RS08285 SM00475 5'-3' exonuclease RM27_RS08285 SM00482 DNA polymerase A domain RM27_RS08295 SM00387 Histidine kinase-like ATPases RM27_RS08295 SM00388 His Kinase A (phosphoacceptor) domain RM27_RS08300 SM00448 cheY-homologous receiver domain RM27_RS08300 SM00862 Transcriptional regulatory protein, C terminal RM27_RS08305 SM01329 RM27_RS08305 RM27_RS08350 SM00919 Malic enzyme, NAD binding domain RM27_RS08350 SM01274 RM27_RS08350 RM27_RS08355 SM00481 DNA polymerase alpha chain like domain RM27_RS08365 SM00116 Domain in cystathionine beta-synthase and other proteins. RM27_RS08375 SM00849 Metallo-beta-lactamase superfamily RM27_RS08385 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RM27_RS08385 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RM27_RS08415 SM00981 RM27_RS08415 RM27_RS08430 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RM27_RS08435 SM00363 S4 RNA-binding domain RM27_RS08435 SM01390 RM27_RS08435 RM27_RS08470 SM00563 Phosphate acyltransferases RM27_RS08475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RM27_RS08480 SM00363 S4 RNA-binding domain RM27_RS08490 SM00725 NEAr Transporter domain RM27_RS08515 SM00354 helix_turn _helix lactose operon repressor RM27_RS08520 SM00830 Chorismate mutase type II RM27_RS08540 SM00843 RM27_RS08540 RM27_RS08570 SM00849 Metallo-beta-lactamase superfamily RM27_RS08600 SM00363 S4 RNA-binding domain RM27_RS08620 SM00450 Rhodanese Homology Domain RM27_RS08635 SM00729 Elongator protein 3, MiaB family, Radical SAM RM27_RS08645 SM00347 helix_turn_helix multiple antibiotic resistance protein RM27_RS08695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RM27_RS08705 SM00226 Low molecular weight phosphatase family RM27_RS08710 SM00047 Lysozyme subfamily 2 RM27_RS08805 SM01234 RM27_RS08805 RM27_RS08825 SM00894 Excalibur calcium-binding domain RM27_RS08940 SM00382 ATPases associated with a variety of cellular activities RM27_RS08955 SM01260 RM27_RS08955 RM27_RS09065 SM00382 ATPases associated with a variety of cellular activities RM27_RS09090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RM27_RS09115 SM00530 Helix-turn-helix XRE-family like proteins RM27_RS09120 SM00421 helix_turn_helix, Lux Regulon RM27_RS09120 SM00448 cheY-homologous receiver domain RM27_RS09165 SM00382 ATPases associated with a variety of cellular activities RM27_RS09170 SM00062 Bacterial periplasmic substrate-binding proteins RM27_RS09360 SM00382 ATPases associated with a variety of cellular activities RM27_RS09370 SM00478 endonuclease III RM27_RS09430 SM00226 Low molecular weight phosphatase family RM27_RS09445 SM00421 helix_turn_helix, Lux Regulon RM27_RS09445 SM00448 cheY-homologous receiver domain RM27_RS09450 SM00387 Histidine kinase-like ATPases RM27_RS09500 SM00479 RM27_RS09500 RM27_RS09520 SM00046 Diacylglycerol kinase catalytic domain (presumed) RM27_RS09525 SM00845 GatB domain RM27_RS09550 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RM27_RS09550 SM00292 breast cancer carboxy-terminal domain RM27_RS09550 SM00532 Ligase N family RM27_RS09570 SM00998 Adenylosuccinate lyase C-terminus RM27_RS09615 SM00710 Parallel beta-helix repeats RM27_RS09625 SM01131 RM27_RS09625 RM27_RS09675 SM00382 ATPases associated with a variety of cellular activities RM27_RS09685 SM00382 ATPases associated with a variety of cellular activities RM27_RS09690 SM00345 helix_turn_helix gluconate operon transcriptional repressor RM27_RS09730 SM00287 Bacterial SH3 domain homologues RM27_RS09850 SM00507 HNH nucleases RM27_RS09995 SM00530 Helix-turn-helix XRE-family like proteins RM27_RS10000 SM00530 Helix-turn-helix XRE-family like proteins RM27_RS10005 SM00479 RM27_RS10005 RM27_RS10090 SM00883 Chaperonin 10 Kd subunit RM27_RS10120 SM00793 Accessory gene regulator B RM27_RS10125 SM00794 Staphylococcal AgrD protein RM27_RS10135 SM00448 cheY-homologous receiver domain RM27_RS10135 SM00850 LytTr DNA-binding domain RM27_RS10145 SM00640 Glycosyl hydrolases family 32 RM27_RS10150 SM00354 helix_turn _helix lactose operon repressor RM27_RS10170 SM00881 CoA binding domain RM27_RS10175 SM00382 ATPases associated with a variety of cellular activities RM27_RS10180 SM00534 ATPase domain of DNA mismatch repair MUTS family RM27_RS10225 SM00917 LeuA allosteric (dimerisation) domain RM27_RS10230 SM01329 RM27_RS10230 RM27_RS10275 SM00731 SprT homologues. RM27_RS10280 SM00316 Ribosomal protein S1-like RNA-binding domain RM27_RS10280 SM00732 Likely ribonuclease with RNase H fold. RM27_RS10300 SM00331 Sigma factor PP2C-like phosphatases RM27_RS10300 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain RM27_RS10315 SM01005 Alanine racemase, C-terminal domain RM27_RS10360 SM00387 Histidine kinase-like ATPases RM27_RS10360 SM00388 His Kinase A (phosphoacceptor) domain RM27_RS10365 SM00448 cheY-homologous receiver domain RM27_RS10365 SM00862 Transcriptional regulatory protein, C terminal RM27_RS10370 SM00487 DEAD-like helicases superfamily RM27_RS10370 SM00490 helicase superfamily c-terminal domain RM27_RS10400 SM00155 Phospholipase D. Active site motifs. RM27_RS10405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RM27_RS10470 SM00382 ATPases associated with a variety of cellular activities RM27_RS10530 SM00226 Low molecular weight phosphatase family RM27_RS10545 SM00937 RM27_RS10545 RM27_RS10560 SM00357 Cold shock protein domain RM27_RS10560 SM00382 ATPases associated with a variety of cellular activities RM27_RS10560 SM00959 Rho termination factor, N-terminal domain RM27_RS10635 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain RM27_RS10640 SM01133 RM27_RS10640 RM27_RS10680 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RM27_RS10710 SM00382 ATPases associated with a variety of cellular activities RM27_RS10930 SM00829 Enoylreductase RM27_RS10935 SM00829 Enoylreductase RM27_RS10960 SM01133 RM27_RS10960 RM27_RS10980 SM00420 helix_turn_helix, Deoxyribose operon repressor RM27_RS10980 SM01134 RM27_RS10980 RM27_RS11000 SM00422 helix_turn_helix, mercury resistance RM27_RS11050 SM00382 ATPases associated with a variety of cellular activities RM27_RS11090 SM00382 ATPases associated with a variety of cellular activities RM27_RS11095 SM00382 ATPases associated with a variety of cellular activities RM27_RS11105 SM00662 RNA polymerases D RM27_RS11125 SM00316 Ribosomal protein S1-like RNA-binding domain RM27_RS11180 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RM27_RS11185 SM01374 RM27_RS11185 RM27_RS11205 SM00322 K homology RNA-binding domain RM27_RS11220 SM01382 RM27_RS11220 RM27_RS11220 SM01383 RM27_RS11220 RM27_RS11240 SM01403 RM27_RS11240 RM27_RS11255 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RM27_RS11255 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RM27_RS11255 SM00493 RM27_RS11255 RM27_RS11295 SM00347 helix_turn_helix multiple antibiotic resistance protein RM27_RS11310 SM00729 Elongator protein 3, MiaB family, Radical SAM RM27_RS11335 SM00852 Probable molybdopterin binding domain RM27_RS11345 SM00852 Probable molybdopterin binding domain RM27_RS11355 SM00382 ATPases associated with a variety of cellular activities RM27_RS11420 SM00988 UreE urease accessory protein, N-terminal domain RM27_RS11455 SM00342 helix_turn_helix, arabinose operon control protein RM27_RS11495 SM00047 Lysozyme subfamily 2 RM27_RS11510 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RM27_RS11510 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RM27_RS11525 SM00420 helix_turn_helix, Deoxyribose operon repressor RM27_RS11670 SM00382 ATPases associated with a variety of cellular activities RM27_RS11745 SM00347 helix_turn_helix multiple antibiotic resistance protein RM27_RS11760 SM00382 ATPases associated with a variety of cellular activities RM27_RS11770 SM00448 cheY-homologous receiver domain RM27_RS11770 SM00862 Transcriptional regulatory protein, C terminal RM27_RS11775 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RM27_RS11775 SM00387 Histidine kinase-like ATPases RM27_RS11775 SM00388 His Kinase A (phosphoacceptor) domain RM27_RS11780 SM00850 LytTr DNA-binding domain RM27_RS11815 SM00829 Enoylreductase RM27_RS11860 SM00342 helix_turn_helix, arabinose operon control protein RM27_RS11885 SM00347 helix_turn_helix multiple antibiotic resistance protein RM27_RS11910 SM00422 helix_turn_helix, mercury resistance RM27_RS11915 SM00421 helix_turn_helix, Lux Regulon RM27_RS11915 SM00448 cheY-homologous receiver domain RM27_RS11920 SM00387 Histidine kinase-like ATPases RM27_RS11945 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RM27_RS12020 SM00382 ATPases associated with a variety of cellular activities RM27_RS12030 SM00062 Bacterial periplasmic substrate-binding proteins RM27_RS12030 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RM27_RS12040 SM00855 Phosphoglycerate mutase family RM27_RS12085 SM00729 Elongator protein 3, MiaB family, Radical SAM RM27_RS12085 SM00876 Biotin and Thiamin Synthesis associated domain RM27_RS12100 SM00382 ATPases associated with a variety of cellular activities RM27_RS12105 SM00382 ATPases associated with a variety of cellular activities RM27_RS12130 SM00871 Bacterial transcription activator, effector binding domain RM27_RS12195 SM00116 Domain in cystathionine beta-synthase and other proteins. RM27_RS12195 SM00382 ATPases associated with a variety of cellular activities RM27_RS12225 SM00382 ATPases associated with a variety of cellular activities RM27_RS12265 SM00382 ATPases associated with a variety of cellular activities RM27_RS12270 SM00382 ATPases associated with a variety of cellular activities RM27_RS12390 SM00487 DEAD-like helicases superfamily RM27_RS12390 SM00490 helicase superfamily c-terminal domain RM27_RS12420 SM01208 RM27_RS12420 RM27_RS12465 SM00345 helix_turn_helix gluconate operon transcriptional repressor RM27_RS12465 SM00895 RM27_RS12465 RM27_RS12470 SM00422 helix_turn_helix, mercury resistance RM27_RS12475 SM00954 Region found in RelA / SpoT proteins RM27_RS12505 SM00347 helix_turn_helix multiple antibiotic resistance protein RM27_RS12510 SM00382 ATPases associated with a variety of cellular activities RM27_RS12540 SM00347 helix_turn_helix multiple antibiotic resistance protein RM27_RS12570 SM00382 ATPases associated with a variety of cellular activities RM27_RS12685 SM00382 ATPases associated with a variety of cellular activities RM27_RS12685 SM01086 C-terminal, D2-small domain, of ClpB protein RM27_RS12695 SM00899 RM27_RS12695 RM27_RS12715 SM01266 RM27_RS12715 RM27_RS12905 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain RM27_RS13035 SM00382 ATPases associated with a variety of cellular activities RM27_RS13040 SM00387 Histidine kinase-like ATPases RM27_RS13045 SM00448 cheY-homologous receiver domain RM27_RS13045 SM00862 Transcriptional regulatory protein, C terminal RM27_RS13055 SM00098 Alkaline phosphatase homologues RM27_RS13060 SM00347 helix_turn_helix multiple antibiotic resistance protein RM27_RS13140 SM00047 Lysozyme subfamily 2 RM27_RS13165 SM00957 SecA DEAD-like domain RM27_RS13165 SM00958 SecA preprotein cross-linking domain RM27_RS13195 SM00903 Flavin reductase like domain RM27_RS13215 SM00903 Flavin reductase like domain RM27_RS13335 SM00382 ATPases associated with a variety of cellular activities RM27_RS13350 SM00867 YceI-like domain RM27_RS13360 SM00450 Rhodanese Homology Domain RM27_RS13415 SM00382 ATPases associated with a variety of cellular activities RM27_RS13445 SM00357 Cold shock protein domain RM27_RS13450 SM00530 Helix-turn-helix XRE-family like proteins RM27_RS13465 SM00470 ParB-like nuclease domain RM27_RS13475 SM01228 RM27_RS13475