EQ90_RS00005 SM00382 ATPases associated with a variety of cellular activities EQ90_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain EQ90_RS00010 SM00480 DNA polymerase III beta subunit EQ90_RS00025 SM00387 Histidine kinase-like ATPases EQ90_RS00025 SM00433 TopoisomeraseII EQ90_RS00030 SM00434 DNA Topoisomerase IV EQ90_RS00070 SM00267 diguanylate cyclase EQ90_RS00085 SM00788 Adenylosuccinate synthetase EQ90_RS00100 SM00448 cheY-homologous receiver domain EQ90_RS00100 SM00862 Transcriptional regulatory protein, C terminal EQ90_RS00105 SM00091 PAS domain EQ90_RS00105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain EQ90_RS00105 SM00387 Histidine kinase-like ATPases EQ90_RS00105 SM00388 His Kinase A (phosphoacceptor) domain EQ90_RS00120 SM00849 Metallo-beta-lactamase superfamily EQ90_RS00220 SM00857 Resolvase, N terminal domain EQ90_RS00225 SM00857 Resolvase, N terminal domain EQ90_RS00250 SM00450 Rhodanese Homology Domain EQ90_RS00255 SM00849 Metallo-beta-lactamase superfamily EQ90_RS00305 SM00450 Rhodanese Homology Domain EQ90_RS00310 SM00450 Rhodanese Homology Domain EQ90_RS00310 SM00849 Metallo-beta-lactamase superfamily EQ90_RS00380 SM00148 Phospholipase C, catalytic domain (part); domain X EQ90_RS00410 SM00342 helix_turn_helix, arabinose operon control protein EQ90_RS00440 SM00345 helix_turn_helix gluconate operon transcriptional repressor EQ90_RS00455 SM00257 Lysin motif EQ90_RS00460 SM00347 helix_turn_helix multiple antibiotic resistance protein EQ90_RS00520 SM00470 ParB-like nuclease domain EQ90_RS00540 SM00822 EQ90_RS00540 EQ90_RS00585 SM00345 helix_turn_helix gluconate operon transcriptional repressor EQ90_RS00605 SM01133 EQ90_RS00605 EQ90_RS00625 SM00382 ATPases associated with a variety of cellular activities EQ90_RS00630 SM00062 Bacterial periplasmic substrate-binding proteins EQ90_RS00745 SM00984 UDP binding domain EQ90_RS00785 SM00382 ATPases associated with a variety of cellular activities EQ90_RS00845 SM00859 Semialdehyde dehydrogenase, NAD binding domain EQ90_RS00905 SM00487 DEAD-like helicases superfamily EQ90_RS00925 SM00382 ATPases associated with a variety of cellular activities EQ90_RS00965 SM00382 ATPases associated with a variety of cellular activities EQ90_RS01010 SM00342 helix_turn_helix, arabinose operon control protein EQ90_RS01010 SM00448 cheY-homologous receiver domain EQ90_RS01085 SM00882 Coenzyme A transferase EQ90_RS01165 SM00829 Enoylreductase EQ90_RS01175 SM00829 Enoylreductase EQ90_RS01225 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. EQ90_RS01225 SM00387 Histidine kinase-like ATPases EQ90_RS01230 SM00448 cheY-homologous receiver domain EQ90_RS01230 SM00850 LytTr DNA-binding domain EQ90_RS01245 SM00345 helix_turn_helix gluconate operon transcriptional repressor EQ90_RS01245 SM00866 EQ90_RS01245 EQ90_RS01290 SM00354 helix_turn _helix lactose operon repressor EQ90_RS01325 SM00382 ATPases associated with a variety of cellular activities EQ90_RS01520 SM00382 ATPases associated with a variety of cellular activities EQ90_RS01550 SM01130 EQ90_RS01550 EQ90_RS01605 SM00506 Appr-1"-p processing enzyme EQ90_RS01645 SM00347 helix_turn_helix multiple antibiotic resistance protein EQ90_RS01725 SM00530 Helix-turn-helix XRE-family like proteins EQ90_RS01735 SM00382 ATPases associated with a variety of cellular activities EQ90_RS01785 SM00470 ParB-like nuclease domain EQ90_RS01870 SM00855 Phosphoglycerate mutase family EQ90_RS01940 SM00116 Domain in cystathionine beta-synthase and other proteins. EQ90_RS01940 SM01240 EQ90_RS01940 EQ90_RS02140 SM00833 Cobalamin synthesis protein cobW C-terminal domain EQ90_RS02170 SM00014 Acid phosphatase homologues EQ90_RS02200 SM00382 ATPases associated with a variety of cellular activities EQ90_RS02200 SM00930 EQ90_RS02200 EQ90_RS02215 SM00257 Lysin motif EQ90_RS02270 SM00642 Alpha-amylase domain EQ90_RS02275 SM00345 helix_turn_helix gluconate operon transcriptional repressor EQ90_RS02275 SM00866 EQ90_RS02275 EQ90_RS02290 SM00382 ATPases associated with a variety of cellular activities EQ90_RS02300 SM00278 Helix-hairpin-helix DNA-binding motif class 1 EQ90_RS02300 SM00493 EQ90_RS02300 EQ90_RS02365 SM00465 GIY-YIG type nucleases (URI domain) EQ90_RS02390 SM00493 EQ90_RS02390 EQ90_RS02395 SM00650 Ribosomal RNA adenine dimethylases EQ90_RS02435 SM01400 EQ90_RS02435 EQ90_RS02455 SM00487 DEAD-like helicases superfamily EQ90_RS02455 SM00490 helicase superfamily c-terminal domain EQ90_RS02455 SM00982 EQ90_RS02455 EQ90_RS02455 SM01058 CarD-like/TRCF domain EQ90_RS02470 SM00363 S4 RNA-binding domain EQ90_RS02480 SM00316 Ribosomal protein S1-like RNA-binding domain EQ90_RS02485 SM00977 TilS substrate C-terminal domain EQ90_RS02495 SM00382 ATPases associated with a variety of cellular activities EQ90_RS02515 SM00905 Dihydroneopterin aldolase EQ90_RS02615 SM00345 helix_turn_helix gluconate operon transcriptional repressor EQ90_RS02650 SM00382 ATPases associated with a variety of cellular activities EQ90_RS02650 SM01086 C-terminal, D2-small domain, of ClpB protein EQ90_RS02660 SM00382 ATPases associated with a variety of cellular activities EQ90_RS02665 SM00670 Large family of predicted nucleotide-binding domains EQ90_RS02680 SM00840 EQ90_RS02680 EQ90_RS02690 SM00967 RNA 2'-O ribose methyltransferase substrate binding EQ90_RS02710 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. EQ90_RS02710 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. EQ90_RS02715 SM00649 Ribosomal protein L11/L12 EQ90_RS02745 SM00663 RNA polymerase I subunit A N-terminus EQ90_RS02765 SM00838 Elongation factor G C-terminus EQ90_RS02765 SM00889 Elongation factor G, domain IV EQ90_RS02880 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family EQ90_RS02930 SM00986 Uracil DNA glycosylase superfamily EQ90_RS02930 SM00987 UreE urease accessory protein, C-terminal domain EQ90_RS03095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. EQ90_RS03105 SM00829 Enoylreductase EQ90_RS03120 SM00836 DALR anticodon binding domain EQ90_RS03120 SM01016 Arginyl tRNA synthetase N terminal dom EQ90_RS03125 SM00478 endonuclease III EQ90_RS03240 SM00382 ATPases associated with a variety of cellular activities EQ90_RS03245 SM00529 Helix-turn-helix diphteria tox regulatory element EQ90_RS03245 SM00899 EQ90_RS03245 EQ90_RS03260 SM00382 ATPases associated with a variety of cellular activities EQ90_RS03290 SM00382 ATPases associated with a variety of cellular activities EQ90_RS03310 SM00382 ATPases associated with a variety of cellular activities EQ90_RS03330 SM01120 EQ90_RS03330 EQ90_RS03375 SM00448 cheY-homologous receiver domain EQ90_RS03375 SM00862 Transcriptional regulatory protein, C terminal EQ90_RS03380 SM00387 Histidine kinase-like ATPases EQ90_RS03385 SM00382 ATPases associated with a variety of cellular activities EQ90_RS03405 SM00257 Lysin motif EQ90_RS03415 SM00342 helix_turn_helix, arabinose operon control protein EQ90_RS03510 SM00382 ATPases associated with a variety of cellular activities EQ90_RS03515 SM00382 ATPases associated with a variety of cellular activities EQ90_RS03520 SM00347 helix_turn_helix multiple antibiotic resistance protein EQ90_RS03525 SM00833 Cobalamin synthesis protein cobW C-terminal domain EQ90_RS03580 SM00420 helix_turn_helix, Deoxyribose operon repressor EQ90_RS03580 SM01134 EQ90_RS03580 EQ90_RS03605 SM01091 Transporter associated domain EQ90_RS03620 SM00387 Histidine kinase-like ATPases EQ90_RS03620 SM00388 His Kinase A (phosphoacceptor) domain EQ90_RS03625 SM00448 cheY-homologous receiver domain EQ90_RS03625 SM00862 Transcriptional regulatory protein, C terminal EQ90_RS03680 SM00796 Allophanate hydrolase subunit 1 EQ90_RS03685 SM00797 Allophanate hydrolase subunit 2 EQ90_RS03700 SM00382 ATPases associated with a variety of cellular activities EQ90_RS03705 SM00341 Helicase and RNase D C-terminal EQ90_RS03705 SM00487 DEAD-like helicases superfamily EQ90_RS03705 SM00490 helicase superfamily c-terminal domain EQ90_RS03705 SM00956 EQ90_RS03705 EQ90_RS03710 SM00382 ATPases associated with a variety of cellular activities EQ90_RS03730 SM00046 Diacylglycerol kinase catalytic domain (presumed) EQ90_RS03790 SM00382 ATPases associated with a variety of cellular activities EQ90_RS03845 SM00267 diguanylate cyclase EQ90_RS03865 SM00487 DEAD-like helicases superfamily EQ90_RS03865 SM00490 helicase superfamily c-terminal domain EQ90_RS03880 SM00957 SecA DEAD-like domain EQ90_RS03880 SM00958 SecA preprotein cross-linking domain EQ90_RS03890 SM00937 EQ90_RS03890 EQ90_RS03900 SM00257 Lysin motif EQ90_RS03915 SM00487 DEAD-like helicases superfamily EQ90_RS03915 SM00490 helicase superfamily c-terminal domain EQ90_RS03940 SM00028 Tetratricopeptide repeats EQ90_RS03995 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EQ90_RS04015 SM01192 EQ90_RS04015 EQ90_RS04015 SM01193 EQ90_RS04015 EQ90_RS04035 SM00316 Ribosomal protein S1-like RNA-binding domain EQ90_RS04035 SM00357 Cold shock protein domain EQ90_RS04035 SM00955 EQ90_RS04035 EQ90_RS04100 SM00318 Staphylococcal nuclease homologues EQ90_RS04105 SM00357 Cold shock protein domain EQ90_RS04145 SM00855 Phosphoglycerate mutase family EQ90_RS04205 SM00493 EQ90_RS04205 EQ90_RS04215 SM00382 ATPases associated with a variety of cellular activities EQ90_RS04215 SM00930 EQ90_RS04215 EQ90_RS04250 SM00530 Helix-turn-helix XRE-family like proteins EQ90_RS04255 SM00530 Helix-turn-helix XRE-family like proteins EQ90_RS04280 SM00885 D5 N terminal like EQ90_RS04325 SM00382 ATPases associated with a variety of cellular activities EQ90_RS04390 SM00729 Elongator protein 3, MiaB family, Radical SAM EQ90_RS04535 SM01298 EQ90_RS04535 EQ90_RS04545 SM00316 Ribosomal protein S1-like RNA-binding domain EQ90_RS04560 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase EQ90_RS04645 SM00382 ATPases associated with a variety of cellular activities EQ90_RS04645 SM01086 C-terminal, D2-small domain, of ClpB protein EQ90_RS04690 SM00825 Beta-ketoacyl synthase EQ90_RS04710 SM00382 ATPases associated with a variety of cellular activities EQ90_RS04730 SM00382 ATPases associated with a variety of cellular activities EQ90_RS04735 SM00382 ATPases associated with a variety of cellular activities EQ90_RS04785 SM01118 EQ90_RS04785 EQ90_RS04795 SM00954 Region found in RelA / SpoT proteins EQ90_RS04810 SM00116 Domain in cystathionine beta-synthase and other proteins. EQ90_RS04810 SM00924 MgtE intracellular N domain EQ90_RS04875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. EQ90_RS04905 SM00914 EQ90_RS04905 EQ90_RS04945 SM00382 ATPases associated with a variety of cellular activities EQ90_RS05040 SM00347 helix_turn_helix multiple antibiotic resistance protein EQ90_RS05050 SM00047 Lysozyme subfamily 2 EQ90_RS05050 SM00644 EQ90_RS05050 EQ90_RS05110 SM01001 AIR carboxylase EQ90_RS05130 SM01211 EQ90_RS05130 EQ90_RS05155 SM00798 AICARFT/IMPCHase bienzyme EQ90_RS05155 SM00851 MGS-like domain EQ90_RS05160 SM01209 EQ90_RS05160 EQ90_RS05160 SM01210 EQ90_RS05160 EQ90_RS05170 SM00382 ATPases associated with a variety of cellular activities EQ90_RS05240 SM00849 Metallo-beta-lactamase superfamily EQ90_RS05270 SM00861 Transketolase, pyrimidine binding domain EQ90_RS05290 SM00530 Helix-turn-helix XRE-family like proteins EQ90_RS05295 SM00382 ATPases associated with a variety of cellular activities EQ90_RS05345 SM00838 Elongation factor G C-terminus EQ90_RS05370 SM00878 Biotin carboxylase C-terminal domain EQ90_RS05450 SM00725 NEAr Transporter domain EQ90_RS05455 SM00725 NEAr Transporter domain EQ90_RS05460 SM00725 NEAr Transporter domain EQ90_RS05495 SM00967 RNA 2'-O ribose methyltransferase substrate binding EQ90_RS05505 SM00873 B3/4 domain EQ90_RS05505 SM00874 tRNA synthetase B5 domain EQ90_RS05505 SM00896 Ferredoxin-fold anticodon binding domain EQ90_RS05525 SM00278 Helix-hairpin-helix DNA-binding motif class 1 EQ90_RS05525 SM00481 DNA polymerase alpha chain like domain EQ90_RS05525 SM00483 DNA polymerase X family EQ90_RS05530 SM00463 Small MutS-related domain EQ90_RS05530 SM00533 DNA-binding domain of DNA mismatch repair MUTS family EQ90_RS05530 SM00534 ATPase domain of DNA mismatch repair MUTS family EQ90_RS05545 SM00465 GIY-YIG type nucleases (URI domain) EQ90_RS05745 SM00740 EQ90_RS05745 EQ90_RS05765 SM00842 Cell division protein FtsA EQ90_RS05770 SM00864 Tubulin/FtsZ family, GTPase domain EQ90_RS05770 SM00865 Tubulin/FtsZ family, C-terminal domain EQ90_RS05795 SM00363 S4 RNA-binding domain EQ90_RS05825 SM00363 S4 RNA-binding domain EQ90_RS05850 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain EQ90_RS05855 SM00851 MGS-like domain EQ90_RS05855 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain EQ90_RS05855 SM01209 EQ90_RS05855 EQ90_RS05860 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family EQ90_RS05885 SM00072 Guanylate kinase homologues. EQ90_RS05890 SM01409 EQ90_RS05890 EQ90_RS05900 SM00487 DEAD-like helicases superfamily EQ90_RS05900 SM00490 helicase superfamily c-terminal domain EQ90_RS05935 SM00331 Sigma factor PP2C-like phosphatases EQ90_RS05935 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain EQ90_RS05940 SM00220 Serine/Threonine protein kinases, catalytic domain EQ90_RS05940 SM00740 EQ90_RS05940 EQ90_RS05955 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain EQ90_RS05970 SM01120 EQ90_RS05970 EQ90_RS05970 SM01121 EQ90_RS05970 EQ90_RS05975 SM00487 DEAD-like helicases superfamily EQ90_RS05975 SM00490 helicase superfamily c-terminal domain EQ90_RS05990 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. EQ90_RS05995 SM00822 EQ90_RS05995 EQ90_RS06010 SM00358 Double-stranded RNA binding motif EQ90_RS06010 SM00535 Ribonuclease III family EQ90_RS06015 SM00968 SMC proteins Flexible Hinge Domain EQ90_RS06020 SM00382 ATPases associated with a variety of cellular activities EQ90_RS06020 SM00962 SRP54-type protein, GTPase domain EQ90_RS06020 SM00963 SRP54-type protein, helical bundle domain EQ90_RS06030 SM00382 ATPases associated with a variety of cellular activities EQ90_RS06030 SM00962 SRP54-type protein, GTPase domain EQ90_RS06030 SM00963 SRP54-type protein, helical bundle domain EQ90_RS06080 SM00881 CoA binding domain EQ90_RS06085 SM00257 Lysin motif EQ90_RS06100 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain EQ90_RS06100 SM00437 Bacterial DNA topoisomerase I DNA-binding domain EQ90_RS06100 SM00493 EQ90_RS06100 EQ90_RS06120 SM00382 ATPases associated with a variety of cellular activities EQ90_RS06120 SM01086 C-terminal, D2-small domain, of ClpB protein EQ90_RS06180 SM00479 EQ90_RS06180 EQ90_RS06180 SM00481 DNA polymerase alpha chain like domain EQ90_RS06190 SM00316 Ribosomal protein S1-like RNA-binding domain EQ90_RS06190 SM00322 K homology RNA-binding domain EQ90_RS06220 SM00904 Riboflavin kinase EQ90_RS06225 SM01387 EQ90_RS06225 EQ90_RS06230 SM00316 Ribosomal protein S1-like RNA-binding domain EQ90_RS06230 SM00322 K homology RNA-binding domain EQ90_RS06235 SM00849 Metallo-beta-lactamase superfamily EQ90_RS06240 SM00382 ATPases associated with a variety of cellular activities EQ90_RS06240 SM00843 EQ90_RS06240 EQ90_RS06245 SM00345 helix_turn_helix gluconate operon transcriptional repressor EQ90_RS06245 SM00866 EQ90_RS06245 EQ90_RS06270 SM00530 Helix-turn-helix XRE-family like proteins EQ90_RS06280 SM00852 Probable molybdopterin binding domain EQ90_RS06285 SM00382 ATPases associated with a variety of cellular activities EQ90_RS06290 SM00322 K homology RNA-binding domain EQ90_RS06290 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. EQ90_RS06320 SM00729 Elongator protein 3, MiaB family, Radical SAM EQ90_RS06335 SM00533 DNA-binding domain of DNA mismatch repair MUTS family EQ90_RS06335 SM00534 ATPase domain of DNA mismatch repair MUTS family EQ90_RS06340 SM00853 MutL C terminal dimerisation domain EQ90_RS06340 SM01340 EQ90_RS06340 EQ90_RS06395 SM00422 helix_turn_helix, mercury resistance EQ90_RS06400 SM01230 EQ90_RS06400 EQ90_RS06510 SM00155 Phospholipase D. Active site motifs. EQ90_RS06515 SM00382 ATPases associated with a variety of cellular activities EQ90_RS06530 SM00421 helix_turn_helix, Lux Regulon EQ90_RS06530 SM00448 cheY-homologous receiver domain EQ90_RS06540 SM00318 Staphylococcal nuclease homologues EQ90_RS06595 SM01060 EQ90_RS06595 EQ90_RS06610 SM01240 EQ90_RS06610 EQ90_RS06640 SM00861 Transketolase, pyrimidine binding domain EQ90_RS06695 SM01207 EQ90_RS06695 EQ90_RS06700 SM00387 Histidine kinase-like ATPases EQ90_RS06700 SM00433 TopoisomeraseII EQ90_RS06705 SM00434 DNA Topoisomerase IV EQ90_RS06720 SM01061 CAT RNA binding domain EQ90_RS06825 SM00382 ATPases associated with a variety of cellular activities EQ90_RS06830 SM00382 ATPases associated with a variety of cellular activities EQ90_RS06865 SM00382 ATPases associated with a variety of cellular activities EQ90_RS06900 SM00382 ATPases associated with a variety of cellular activities EQ90_RS06910 SM00859 Semialdehyde dehydrogenase, NAD binding domain EQ90_RS06915 SM01130 EQ90_RS06915 EQ90_RS06935 SM01005 Alanine racemase, C-terminal domain EQ90_RS06950 SM00357 Cold shock protein domain EQ90_RS06995 SM00327 von Willebrand factor (vWF) type A domain EQ90_RS07020 SM00861 Transketolase, pyrimidine binding domain EQ90_RS07025 SM00387 Histidine kinase-like ATPases EQ90_RS07025 SM00388 His Kinase A (phosphoacceptor) domain EQ90_RS07030 SM00448 cheY-homologous receiver domain EQ90_RS07030 SM00862 Transcriptional regulatory protein, C terminal EQ90_RS07045 SM01321 EQ90_RS07045 EQ90_RS07050 SM00014 Acid phosphatase homologues EQ90_RS07065 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. EQ90_RS07065 SM00245 tail specific protease EQ90_RS07115 SM00567 E-Z type HEAT repeats EQ90_RS07115 SM00932 Scaffold protein Nfu/NifU N terminal EQ90_RS07120 SM00932 Scaffold protein Nfu/NifU N terminal EQ90_RS07150 SM00844 GA module EQ90_RS07170 SM01002 Alanine dehydrogenase/PNT, C-terminal domain EQ90_RS07170 SM01003 Alanine dehydrogenase/PNT, N-terminal domain EQ90_RS07175 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs EQ90_RS07175 SM00475 5'-3' exonuclease EQ90_RS07200 SM00981 EQ90_RS07200 EQ90_RS07240 SM00478 endonuclease III EQ90_RS07240 SM00525 EQ90_RS07240 EQ90_RS07255 SM00479 EQ90_RS07255 EQ90_RS07255 SM00491 EQ90_RS07255 EQ90_RS07290 SM00914 EQ90_RS07290 EQ90_RS07295 SM00028 Tetratricopeptide repeats EQ90_RS07320 SM00562 EQ90_RS07320 EQ90_RS07345 SM00411 bacterial (prokaryotic) histone like domain EQ90_RS07360 SM00316 Ribosomal protein S1-like RNA-binding domain EQ90_RS07385 SM00870 EQ90_RS07385 EQ90_RS07400 SM00257 Lysin motif EQ90_RS07405 SM00487 DEAD-like helicases superfamily EQ90_RS07405 SM00490 helicase superfamily c-terminal domain EQ90_RS07465 SM00287 Bacterial SH3 domain homologues EQ90_RS07465 SM00646 EQ90_RS07465 EQ90_RS07530 SM00635 Bacterial Ig-like domain 2 EQ90_RS07585 SM00507 HNH nucleases EQ90_RS07595 SM00487 DEAD-like helicases superfamily EQ90_RS07600 SM00990 EQ90_RS07600 EQ90_RS07680 SM00482 DNA polymerase A domain EQ90_RS07735 SM00530 Helix-turn-helix XRE-family like proteins EQ90_RS07740 SM00530 Helix-turn-helix XRE-family like proteins EQ90_RS07785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain EQ90_RS07785 SM00387 Histidine kinase-like ATPases EQ90_RS07785 SM00388 His Kinase A (phosphoacceptor) domain EQ90_RS07790 SM00448 cheY-homologous receiver domain EQ90_RS07790 SM00862 Transcriptional regulatory protein, C terminal EQ90_RS07795 SM00363 S4 RNA-binding domain EQ90_RS07860 SM00342 helix_turn_helix, arabinose operon control protein EQ90_RS07860 SM00871 Bacterial transcription activator, effector binding domain EQ90_RS07865 SM00642 Alpha-amylase domain EQ90_RS07870 SM00354 helix_turn _helix lactose operon repressor EQ90_RS07885 SM01350 EQ90_RS07885 EQ90_RS07915 SM00861 Transketolase, pyrimidine binding domain EQ90_RS07965 SM00878 Biotin carboxylase C-terminal domain EQ90_RS07975 SM00841 Elongation factor P, C-terminal EQ90_RS07975 SM01185 EQ90_RS07975 EQ90_RS08000 SM00450 Rhodanese Homology Domain EQ90_RS08060 SM00849 Metallo-beta-lactamase superfamily EQ90_RS08115 SM00382 ATPases associated with a variety of cellular activities EQ90_RS08120 SM00518 AP endonuclease family 2 EQ90_RS08125 SM00487 DEAD-like helicases superfamily EQ90_RS08125 SM00490 helicase superfamily c-terminal domain EQ90_RS08145 SM00400 zinc finger EQ90_RS08145 SM00493 EQ90_RS08145 EQ90_RS08155 SM00116 Domain in cystathionine beta-synthase and other proteins. EQ90_RS08215 SM00729 Elongator protein 3, MiaB family, Radical SAM EQ90_RS08230 SM00271 DnaJ molecular chaperone homology domain EQ90_RS08250 SM00729 Elongator protein 3, MiaB family, Radical SAM EQ90_RS08260 SM00838 Elongation factor G C-terminus EQ90_RS08275 SM00849 Metallo-beta-lactamase superfamily EQ90_RS08285 SM00278 Helix-hairpin-helix DNA-binding motif class 1 EQ90_RS08300 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. EQ90_RS08310 SM01103 EQ90_RS08310 EQ90_RS08365 SM00878 Biotin carboxylase C-terminal domain EQ90_RS08375 SM00797 Allophanate hydrolase subunit 2 EQ90_RS08380 SM00796 Allophanate hydrolase subunit 1 EQ90_RS08415 SM00732 Likely ribonuclease with RNase H fold. EQ90_RS08425 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain EQ90_RS08430 SM00382 ATPases associated with a variety of cellular activities EQ90_RS08435 SM00028 Tetratricopeptide repeats EQ90_RS08470 SM00382 ATPases associated with a variety of cellular activities EQ90_RS08495 SM00287 Bacterial SH3 domain homologues EQ90_RS08495 SM00646 EQ90_RS08495 EQ90_RS08505 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. EQ90_RS08505 SM00954 Region found in RelA / SpoT proteins EQ90_RS08525 SM01323 EQ90_RS08525 EQ90_RS08540 SM00382 ATPases associated with a variety of cellular activities EQ90_RS08545 SM00278 Helix-hairpin-helix DNA-binding motif class 1 EQ90_RS08645 SM01004 Delta-aminolevulinic acid dehydratase EQ90_RS08675 SM00382 ATPases associated with a variety of cellular activities EQ90_RS08675 SM00994 ClpX C4-type zinc finger EQ90_RS08675 SM01086 C-terminal, D2-small domain, of ClpB protein EQ90_RS08725 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain EQ90_RS08750 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain EQ90_RS08760 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain EQ90_RS08760 SM01232 EQ90_RS08760 EQ90_RS08765 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs EQ90_RS08765 SM00474 3'-5' exonuclease EQ90_RS08765 SM00475 5'-3' exonuclease EQ90_RS08765 SM00482 DNA polymerase A domain EQ90_RS08775 SM00387 Histidine kinase-like ATPases EQ90_RS08775 SM00388 His Kinase A (phosphoacceptor) domain EQ90_RS08780 SM00448 cheY-homologous receiver domain EQ90_RS08780 SM00862 Transcriptional regulatory protein, C terminal EQ90_RS08790 SM01329 EQ90_RS08790 EQ90_RS08835 SM00919 Malic enzyme, NAD binding domain EQ90_RS08835 SM01274 EQ90_RS08835 EQ90_RS08840 SM00481 DNA polymerase alpha chain like domain EQ90_RS08850 SM00116 Domain in cystathionine beta-synthase and other proteins. EQ90_RS08860 SM00849 Metallo-beta-lactamase superfamily EQ90_RS08875 SM01002 Alanine dehydrogenase/PNT, C-terminal domain EQ90_RS08875 SM01003 Alanine dehydrogenase/PNT, N-terminal domain EQ90_RS08905 SM00981 EQ90_RS08905 EQ90_RS08925 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. EQ90_RS08930 SM00363 S4 RNA-binding domain EQ90_RS08930 SM01390 EQ90_RS08930 EQ90_RS08975 SM00563 Phosphate acyltransferases EQ90_RS08980 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. EQ90_RS08985 SM00363 S4 RNA-binding domain EQ90_RS09000 SM00725 NEAr Transporter domain EQ90_RS09025 SM00354 helix_turn _helix lactose operon repressor EQ90_RS09035 SM00830 Chorismate mutase type II EQ90_RS09060 SM00843 EQ90_RS09060 EQ90_RS09090 SM00849 Metallo-beta-lactamase superfamily EQ90_RS09120 SM00363 S4 RNA-binding domain EQ90_RS09140 SM00450 Rhodanese Homology Domain EQ90_RS09155 SM00729 Elongator protein 3, MiaB family, Radical SAM EQ90_RS09165 SM00347 helix_turn_helix multiple antibiotic resistance protein EQ90_RS09220 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor EQ90_RS09230 SM00226 Low molecular weight phosphatase family EQ90_RS09235 SM00047 Lysozyme subfamily 2 EQ90_RS09330 SM01234 EQ90_RS09330 EQ90_RS09350 SM00894 Excalibur calcium-binding domain EQ90_RS09485 SM00382 ATPases associated with a variety of cellular activities EQ90_RS09500 SM01260 EQ90_RS09500 EQ90_RS09620 SM00382 ATPases associated with a variety of cellular activities EQ90_RS09645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. EQ90_RS09675 SM00530 Helix-turn-helix XRE-family like proteins EQ90_RS09680 SM00421 helix_turn_helix, Lux Regulon EQ90_RS09680 SM00448 cheY-homologous receiver domain EQ90_RS09730 SM00382 ATPases associated with a variety of cellular activities EQ90_RS09735 SM00062 Bacterial periplasmic substrate-binding proteins EQ90_RS09930 SM00382 ATPases associated with a variety of cellular activities EQ90_RS09940 SM00478 endonuclease III EQ90_RS10010 SM00226 Low molecular weight phosphatase family EQ90_RS10025 SM00421 helix_turn_helix, Lux Regulon EQ90_RS10025 SM00448 cheY-homologous receiver domain EQ90_RS10030 SM00387 Histidine kinase-like ATPases EQ90_RS10090 SM00479 EQ90_RS10090 EQ90_RS10110 SM00046 Diacylglycerol kinase catalytic domain (presumed) EQ90_RS10120 SM00845 GatB domain EQ90_RS10145 SM00278 Helix-hairpin-helix DNA-binding motif class 1 EQ90_RS10145 SM00292 breast cancer carboxy-terminal domain EQ90_RS10145 SM00532 Ligase N family EQ90_RS10165 SM00998 Adenylosuccinate lyase C-terminus EQ90_RS10220 SM00710 Parallel beta-helix repeats EQ90_RS10230 SM01131 EQ90_RS10230 EQ90_RS10290 SM00382 ATPases associated with a variety of cellular activities EQ90_RS10300 SM00382 ATPases associated with a variety of cellular activities EQ90_RS10305 SM00345 helix_turn_helix gluconate operon transcriptional repressor EQ90_RS10365 SM00287 Bacterial SH3 domain homologues EQ90_RS10495 SM00507 HNH nucleases EQ90_RS10635 SM00530 Helix-turn-helix XRE-family like proteins EQ90_RS10645 SM00530 Helix-turn-helix XRE-family like proteins EQ90_RS10650 SM00479 EQ90_RS10650 EQ90_RS10740 SM00883 Chaperonin 10 Kd subunit EQ90_RS10770 SM00793 Accessory gene regulator B EQ90_RS10775 SM00794 Staphylococcal AgrD protein EQ90_RS10785 SM00448 cheY-homologous receiver domain EQ90_RS10785 SM00850 LytTr DNA-binding domain EQ90_RS10800 SM00640 Glycosyl hydrolases family 32 EQ90_RS10805 SM00354 helix_turn _helix lactose operon repressor EQ90_RS10825 SM00881 CoA binding domain EQ90_RS10830 SM00382 ATPases associated with a variety of cellular activities EQ90_RS10840 SM00534 ATPase domain of DNA mismatch repair MUTS family EQ90_RS10890 SM00917 LeuA allosteric (dimerisation) domain EQ90_RS10895 SM01329 EQ90_RS10895 EQ90_RS10945 SM00731 SprT homologues. EQ90_RS10950 SM00316 Ribosomal protein S1-like RNA-binding domain EQ90_RS10950 SM00732 Likely ribonuclease with RNase H fold. EQ90_RS10970 SM00331 Sigma factor PP2C-like phosphatases EQ90_RS10970 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain EQ90_RS10990 SM01005 Alanine racemase, C-terminal domain EQ90_RS11035 SM00387 Histidine kinase-like ATPases EQ90_RS11035 SM00388 His Kinase A (phosphoacceptor) domain EQ90_RS11040 SM00448 cheY-homologous receiver domain EQ90_RS11040 SM00862 Transcriptional regulatory protein, C terminal EQ90_RS11045 SM00487 DEAD-like helicases superfamily EQ90_RS11045 SM00490 helicase superfamily c-terminal domain EQ90_RS11080 SM00155 Phospholipase D. Active site motifs. EQ90_RS11085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. EQ90_RS11170 SM00382 ATPases associated with a variety of cellular activities EQ90_RS11230 SM00226 Low molecular weight phosphatase family EQ90_RS11245 SM00937 EQ90_RS11245 EQ90_RS11260 SM00357 Cold shock protein domain EQ90_RS11260 SM00382 ATPases associated with a variety of cellular activities EQ90_RS11260 SM00959 Rho termination factor, N-terminal domain EQ90_RS11340 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain EQ90_RS11350 SM01133 EQ90_RS11350 EQ90_RS11390 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor EQ90_RS11430 SM00382 ATPases associated with a variety of cellular activities EQ90_RS11660 SM00829 Enoylreductase EQ90_RS11665 SM00829 Enoylreductase EQ90_RS11690 SM01133 EQ90_RS11690 EQ90_RS11710 SM00420 helix_turn_helix, Deoxyribose operon repressor EQ90_RS11710 SM01134 EQ90_RS11710 EQ90_RS11740 SM00422 helix_turn_helix, mercury resistance EQ90_RS11795 SM00382 ATPases associated with a variety of cellular activities EQ90_RS11840 SM00382 ATPases associated with a variety of cellular activities EQ90_RS11845 SM00382 ATPases associated with a variety of cellular activities EQ90_RS11855 SM00662 RNA polymerases D EQ90_RS11875 SM00316 Ribosomal protein S1-like RNA-binding domain EQ90_RS11930 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. EQ90_RS11935 SM01374 EQ90_RS11935 EQ90_RS11955 SM00322 K homology RNA-binding domain EQ90_RS11970 SM01382 EQ90_RS11970 EQ90_RS11970 SM01383 EQ90_RS11970 EQ90_RS11990 SM01403 EQ90_RS11990 EQ90_RS12005 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain EQ90_RS12005 SM00437 Bacterial DNA topoisomerase I DNA-binding domain EQ90_RS12005 SM00493 EQ90_RS12005 EQ90_RS12065 SM00347 helix_turn_helix multiple antibiotic resistance protein EQ90_RS12095 SM00729 Elongator protein 3, MiaB family, Radical SAM EQ90_RS12120 SM00852 Probable molybdopterin binding domain EQ90_RS12130 SM00852 Probable molybdopterin binding domain EQ90_RS12140 SM00382 ATPases associated with a variety of cellular activities EQ90_RS12205 SM00988 UreE urease accessory protein, N-terminal domain EQ90_RS12245 SM00342 helix_turn_helix, arabinose operon control protein EQ90_RS12295 SM00047 Lysozyme subfamily 2 EQ90_RS12310 SM00926 Molybdopterin oxidoreductase Fe4S4 domain EQ90_RS12310 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region EQ90_RS12325 SM00420 helix_turn_helix, Deoxyribose operon repressor EQ90_RS12480 SM00382 ATPases associated with a variety of cellular activities EQ90_RS12565 SM00347 helix_turn_helix multiple antibiotic resistance protein EQ90_RS12580 SM00382 ATPases associated with a variety of cellular activities EQ90_RS12590 SM00448 cheY-homologous receiver domain EQ90_RS12590 SM00862 Transcriptional regulatory protein, C terminal EQ90_RS12595 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain EQ90_RS12595 SM00387 Histidine kinase-like ATPases EQ90_RS12595 SM00388 His Kinase A (phosphoacceptor) domain EQ90_RS12600 SM00850 LytTr DNA-binding domain EQ90_RS12635 SM00829 Enoylreductase EQ90_RS12690 SM00342 helix_turn_helix, arabinose operon control protein EQ90_RS12715 SM00347 helix_turn_helix multiple antibiotic resistance protein EQ90_RS12735 SM00422 helix_turn_helix, mercury resistance EQ90_RS12740 SM00421 helix_turn_helix, Lux Regulon EQ90_RS12740 SM00448 cheY-homologous receiver domain EQ90_RS12745 SM00387 Histidine kinase-like ATPases EQ90_RS12770 SM00926 Molybdopterin oxidoreductase Fe4S4 domain EQ90_RS12850 SM00382 ATPases associated with a variety of cellular activities EQ90_RS12860 SM00062 Bacterial periplasmic substrate-binding proteins EQ90_RS12860 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. EQ90_RS12880 SM00855 Phosphoglycerate mutase family EQ90_RS12935 SM00729 Elongator protein 3, MiaB family, Radical SAM EQ90_RS12935 SM00876 Biotin and Thiamin Synthesis associated domain EQ90_RS12960 SM00382 ATPases associated with a variety of cellular activities EQ90_RS12965 SM00382 ATPases associated with a variety of cellular activities EQ90_RS13000 SM00871 Bacterial transcription activator, effector binding domain EQ90_RS13080 SM00116 Domain in cystathionine beta-synthase and other proteins. EQ90_RS13080 SM00382 ATPases associated with a variety of cellular activities EQ90_RS13120 SM00382 ATPases associated with a variety of cellular activities EQ90_RS13165 SM00382 ATPases associated with a variety of cellular activities EQ90_RS13170 SM00382 ATPases associated with a variety of cellular activities EQ90_RS13300 SM00487 DEAD-like helicases superfamily EQ90_RS13300 SM00490 helicase superfamily c-terminal domain EQ90_RS13335 SM01208 EQ90_RS13335 EQ90_RS13390 SM00345 helix_turn_helix gluconate operon transcriptional repressor EQ90_RS13390 SM00895 EQ90_RS13390 EQ90_RS13395 SM00422 helix_turn_helix, mercury resistance EQ90_RS13400 SM00954 Region found in RelA / SpoT proteins EQ90_RS13435 SM00347 helix_turn_helix multiple antibiotic resistance protein EQ90_RS13440 SM00382 ATPases associated with a variety of cellular activities EQ90_RS13475 SM00347 helix_turn_helix multiple antibiotic resistance protein EQ90_RS13505 SM00382 ATPases associated with a variety of cellular activities EQ90_RS13640 SM00382 ATPases associated with a variety of cellular activities EQ90_RS13640 SM01086 C-terminal, D2-small domain, of ClpB protein EQ90_RS13655 SM00899 EQ90_RS13655 EQ90_RS13680 SM01266 EQ90_RS13680 EQ90_RS13880 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain EQ90_RS14065 SM00382 ATPases associated with a variety of cellular activities EQ90_RS14070 SM00387 Histidine kinase-like ATPases EQ90_RS14075 SM00448 cheY-homologous receiver domain EQ90_RS14075 SM00862 Transcriptional regulatory protein, C terminal EQ90_RS14090 SM00098 Alkaline phosphatase homologues EQ90_RS14095 SM00347 helix_turn_helix multiple antibiotic resistance protein EQ90_RS14180 SM00047 Lysozyme subfamily 2 EQ90_RS14205 SM00957 SecA DEAD-like domain EQ90_RS14205 SM00958 SecA preprotein cross-linking domain EQ90_RS14235 SM00903 Flavin reductase like domain EQ90_RS14255 SM00903 Flavin reductase like domain EQ90_RS14380 SM00382 ATPases associated with a variety of cellular activities EQ90_RS14395 SM00867 YceI-like domain EQ90_RS14405 SM00450 Rhodanese Homology Domain EQ90_RS14460 SM00382 ATPases associated with a variety of cellular activities EQ90_RS14490 SM00357 Cold shock protein domain EQ90_RS14495 SM00530 Helix-turn-helix XRE-family like proteins EQ90_RS14510 SM00470 ParB-like nuclease domain EQ90_RS14520 SM01228 EQ90_RS14520