AB454_RS00005 SM00382 ATPases associated with a variety of cellular activities AB454_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AB454_RS00010 SM00480 DNA polymerase III beta subunit AB454_RS00025 SM00387 Histidine kinase-like ATPases AB454_RS00025 SM00433 TopoisomeraseII AB454_RS00030 SM00434 DNA Topoisomerase IV AB454_RS00075 SM00267 diguanylate cyclase AB454_RS00095 SM00788 Adenylosuccinate synthetase AB454_RS00110 SM00448 cheY-homologous receiver domain AB454_RS00110 SM00862 Transcriptional regulatory protein, C terminal AB454_RS00115 SM00091 PAS domain AB454_RS00115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB454_RS00115 SM00387 Histidine kinase-like ATPases AB454_RS00115 SM00388 His Kinase A (phosphoacceptor) domain AB454_RS00130 SM00849 Metallo-beta-lactamase superfamily AB454_RS00210 SM00450 Rhodanese Homology Domain AB454_RS00215 SM00450 Rhodanese Homology Domain AB454_RS00215 SM00849 Metallo-beta-lactamase superfamily AB454_RS00290 SM00148 Phospholipase C, catalytic domain (part); domain X AB454_RS00330 SM00342 helix_turn_helix, arabinose operon control protein AB454_RS00365 SM00257 Lysin motif AB454_RS00375 SM00347 helix_turn_helix multiple antibiotic resistance protein AB454_RS00435 SM00470 ParB-like nuclease domain AB454_RS00455 SM00822 AB454_RS00455 AB454_RS00500 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB454_RS00520 SM01133 AB454_RS00520 AB454_RS00540 SM00382 ATPases associated with a variety of cellular activities AB454_RS00545 SM00062 Bacterial periplasmic substrate-binding proteins AB454_RS00655 SM00984 UDP binding domain AB454_RS00700 SM00382 ATPases associated with a variety of cellular activities AB454_RS00760 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB454_RS00820 SM00487 DEAD-like helicases superfamily AB454_RS00835 SM00382 ATPases associated with a variety of cellular activities AB454_RS00860 SM00382 ATPases associated with a variety of cellular activities AB454_RS00865 SM00530 Helix-turn-helix XRE-family like proteins AB454_RS00870 SM00382 ATPases associated with a variety of cellular activities AB454_RS00910 SM00382 ATPases associated with a variety of cellular activities AB454_RS00955 SM00342 helix_turn_helix, arabinose operon control protein AB454_RS00955 SM00448 cheY-homologous receiver domain AB454_RS01025 SM00882 Coenzyme A transferase AB454_RS01105 SM00829 Enoylreductase AB454_RS01115 SM00829 Enoylreductase AB454_RS01170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB454_RS01170 SM00387 Histidine kinase-like ATPases AB454_RS01175 SM00448 cheY-homologous receiver domain AB454_RS01175 SM00850 LytTr DNA-binding domain AB454_RS01190 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB454_RS01190 SM00866 AB454_RS01190 AB454_RS01245 SM00354 helix_turn _helix lactose operon repressor AB454_RS01270 SM00382 ATPases associated with a variety of cellular activities AB454_RS01445 SM00382 ATPases associated with a variety of cellular activities AB454_RS01480 SM01130 AB454_RS01480 AB454_RS01535 SM00506 Appr-1"-p processing enzyme AB454_RS01580 SM00347 helix_turn_helix multiple antibiotic resistance protein AB454_RS01660 SM00530 Helix-turn-helix XRE-family like proteins AB454_RS01670 SM00382 ATPases associated with a variety of cellular activities AB454_RS01720 SM00470 ParB-like nuclease domain AB454_RS01805 SM00855 Phosphoglycerate mutase family AB454_RS01880 SM00116 Domain in cystathionine beta-synthase and other proteins. AB454_RS01880 SM01240 AB454_RS01880 AB454_RS02100 SM00833 Cobalamin synthesis protein cobW C-terminal domain AB454_RS02150 SM00014 Acid phosphatase homologues AB454_RS02180 SM00382 ATPases associated with a variety of cellular activities AB454_RS02180 SM00930 AB454_RS02180 AB454_RS02195 SM00257 Lysin motif AB454_RS02250 SM00642 Alpha-amylase domain AB454_RS02255 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB454_RS02255 SM00866 AB454_RS02255 AB454_RS02275 SM00382 ATPases associated with a variety of cellular activities AB454_RS02285 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB454_RS02285 SM00493 AB454_RS02285 AB454_RS02345 SM00465 GIY-YIG type nucleases (URI domain) AB454_RS02365 SM00493 AB454_RS02365 AB454_RS02370 SM00650 Ribosomal RNA adenine dimethylases AB454_RS02410 SM01400 AB454_RS02410 AB454_RS02430 SM00487 DEAD-like helicases superfamily AB454_RS02430 SM00490 helicase superfamily c-terminal domain AB454_RS02430 SM00982 AB454_RS02430 AB454_RS02430 SM01058 CarD-like/TRCF domain AB454_RS02445 SM00363 S4 RNA-binding domain AB454_RS02455 SM00316 Ribosomal protein S1-like RNA-binding domain AB454_RS02460 SM00977 TilS substrate C-terminal domain AB454_RS02470 SM00382 ATPases associated with a variety of cellular activities AB454_RS02490 SM00905 Dihydroneopterin aldolase AB454_RS02590 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB454_RS02625 SM00382 ATPases associated with a variety of cellular activities AB454_RS02625 SM01086 C-terminal, D2-small domain, of ClpB protein AB454_RS02630 SM00382 ATPases associated with a variety of cellular activities AB454_RS02635 SM00670 Large family of predicted nucleotide-binding domains AB454_RS02655 SM00840 AB454_RS02655 AB454_RS02660 SM00535 Ribonuclease III family AB454_RS02665 SM00967 RNA 2'-O ribose methyltransferase substrate binding AB454_RS02690 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AB454_RS02690 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB454_RS02695 SM00649 Ribosomal protein L11/L12 AB454_RS02730 SM00663 RNA polymerase I subunit A N-terminus AB454_RS02750 SM00838 Elongation factor G C-terminus AB454_RS02750 SM00889 Elongation factor G, domain IV AB454_RS02870 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AB454_RS02925 SM00986 Uracil DNA glycosylase superfamily AB454_RS02925 SM00987 UreE urease accessory protein, C-terminal domain AB454_RS03100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB454_RS03110 SM00829 Enoylreductase AB454_RS03125 SM00836 DALR anticodon binding domain AB454_RS03125 SM01016 Arginyl tRNA synthetase N terminal dom AB454_RS03130 SM00478 endonuclease III AB454_RS03245 SM00382 ATPases associated with a variety of cellular activities AB454_RS03250 SM00529 Helix-turn-helix diphteria tox regulatory element AB454_RS03250 SM00899 AB454_RS03250 AB454_RS03265 SM00382 ATPases associated with a variety of cellular activities AB454_RS03295 SM00382 ATPases associated with a variety of cellular activities AB454_RS03315 SM00382 ATPases associated with a variety of cellular activities AB454_RS03335 SM01120 AB454_RS03335 AB454_RS03380 SM00448 cheY-homologous receiver domain AB454_RS03380 SM00862 Transcriptional regulatory protein, C terminal AB454_RS03385 SM00387 Histidine kinase-like ATPases AB454_RS03390 SM00382 ATPases associated with a variety of cellular activities AB454_RS03410 SM00257 Lysin motif AB454_RS03420 SM00342 helix_turn_helix, arabinose operon control protein AB454_RS03510 SM00382 ATPases associated with a variety of cellular activities AB454_RS03515 SM00382 ATPases associated with a variety of cellular activities AB454_RS03520 SM00347 helix_turn_helix multiple antibiotic resistance protein AB454_RS03525 SM00833 Cobalamin synthesis protein cobW C-terminal domain AB454_RS03580 SM00420 helix_turn_helix, Deoxyribose operon repressor AB454_RS03580 SM01134 AB454_RS03580 AB454_RS03600 SM01091 Transporter associated domain AB454_RS03615 SM00387 Histidine kinase-like ATPases AB454_RS03615 SM00388 His Kinase A (phosphoacceptor) domain AB454_RS03620 SM00448 cheY-homologous receiver domain AB454_RS03620 SM00862 Transcriptional regulatory protein, C terminal AB454_RS03675 SM00796 Allophanate hydrolase subunit 1 AB454_RS03680 SM00797 Allophanate hydrolase subunit 2 AB454_RS03690 SM00382 ATPases associated with a variety of cellular activities AB454_RS03695 SM00341 Helicase and RNase D C-terminal AB454_RS03695 SM00487 DEAD-like helicases superfamily AB454_RS03695 SM00490 helicase superfamily c-terminal domain AB454_RS03695 SM00956 AB454_RS03695 AB454_RS03700 SM00382 ATPases associated with a variety of cellular activities AB454_RS03725 SM00046 Diacylglycerol kinase catalytic domain (presumed) AB454_RS03795 SM00382 ATPases associated with a variety of cellular activities AB454_RS03850 SM00267 diguanylate cyclase AB454_RS03870 SM00487 DEAD-like helicases superfamily AB454_RS03870 SM00490 helicase superfamily c-terminal domain AB454_RS03885 SM00957 SecA DEAD-like domain AB454_RS03885 SM00958 SecA preprotein cross-linking domain AB454_RS03905 SM00257 Lysin motif AB454_RS03920 SM00487 DEAD-like helicases superfamily AB454_RS03920 SM00490 helicase superfamily c-terminal domain AB454_RS03945 SM00028 Tetratricopeptide repeats AB454_RS04005 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB454_RS04025 SM01192 AB454_RS04025 AB454_RS04025 SM01193 AB454_RS04025 AB454_RS04045 SM00316 Ribosomal protein S1-like RNA-binding domain AB454_RS04045 SM00357 Cold shock protein domain AB454_RS04045 SM00955 AB454_RS04045 AB454_RS04070 SM00530 Helix-turn-helix XRE-family like proteins AB454_RS04075 SM00530 Helix-turn-helix XRE-family like proteins AB454_RS04090 SM00885 D5 N terminal like AB454_RS04190 SM00318 Staphylococcal nuclease homologues AB454_RS04195 SM00357 Cold shock protein domain AB454_RS04235 SM00855 Phosphoglycerate mutase family AB454_RS04295 SM00493 AB454_RS04295 AB454_RS04305 SM00382 ATPases associated with a variety of cellular activities AB454_RS04305 SM00930 AB454_RS04305 AB454_RS04330 SM00382 ATPases associated with a variety of cellular activities AB454_RS04395 SM00729 Elongator protein 3, MiaB family, Radical SAM AB454_RS04540 SM01298 AB454_RS04540 AB454_RS04550 SM00316 Ribosomal protein S1-like RNA-binding domain AB454_RS04565 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB454_RS04645 SM00382 ATPases associated with a variety of cellular activities AB454_RS04645 SM01086 C-terminal, D2-small domain, of ClpB protein AB454_RS04690 SM00825 Beta-ketoacyl synthase AB454_RS04710 SM00382 ATPases associated with a variety of cellular activities AB454_RS04715 SM00382 ATPases associated with a variety of cellular activities AB454_RS04730 SM00382 ATPases associated with a variety of cellular activities AB454_RS04735 SM00382 ATPases associated with a variety of cellular activities AB454_RS04785 SM01118 AB454_RS04785 AB454_RS04795 SM00954 Region found in RelA / SpoT proteins AB454_RS04810 SM00116 Domain in cystathionine beta-synthase and other proteins. AB454_RS04810 SM00924 MgtE intracellular N domain AB454_RS04875 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB454_RS04905 SM00914 AB454_RS04905 AB454_RS04950 SM00382 ATPases associated with a variety of cellular activities AB454_RS05050 SM00347 helix_turn_helix multiple antibiotic resistance protein AB454_RS05060 SM00047 Lysozyme subfamily 2 AB454_RS05060 SM00644 AB454_RS05060 AB454_RS05120 SM01001 AIR carboxylase AB454_RS05140 SM01211 AB454_RS05140 AB454_RS05165 SM00798 AICARFT/IMPCHase bienzyme AB454_RS05165 SM00851 MGS-like domain AB454_RS05170 SM01209 AB454_RS05170 AB454_RS05170 SM01210 AB454_RS05170 AB454_RS05180 SM00382 ATPases associated with a variety of cellular activities AB454_RS05250 SM00849 Metallo-beta-lactamase superfamily AB454_RS05280 SM00861 Transketolase, pyrimidine binding domain AB454_RS05300 SM00530 Helix-turn-helix XRE-family like proteins AB454_RS05305 SM00382 ATPases associated with a variety of cellular activities AB454_RS05355 SM00838 Elongation factor G C-terminus AB454_RS05380 SM00878 Biotin carboxylase C-terminal domain AB454_RS05460 SM00725 NEAr Transporter domain AB454_RS05465 SM00725 NEAr Transporter domain AB454_RS05470 SM00725 NEAr Transporter domain AB454_RS05505 SM00967 RNA 2'-O ribose methyltransferase substrate binding AB454_RS05515 SM00873 B3/4 domain AB454_RS05515 SM00874 tRNA synthetase B5 domain AB454_RS05515 SM00896 Ferredoxin-fold anticodon binding domain AB454_RS05540 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB454_RS05540 SM00481 DNA polymerase alpha chain like domain AB454_RS05540 SM00483 DNA polymerase X family AB454_RS05545 SM00463 Small MutS-related domain AB454_RS05545 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AB454_RS05545 SM00534 ATPase domain of DNA mismatch repair MUTS family AB454_RS05560 SM00465 GIY-YIG type nucleases (URI domain) AB454_RS05760 SM00740 AB454_RS05760 AB454_RS05780 SM00842 Cell division protein FtsA AB454_RS05785 SM00864 Tubulin/FtsZ family, GTPase domain AB454_RS05785 SM00865 Tubulin/FtsZ family, C-terminal domain AB454_RS05810 SM00363 S4 RNA-binding domain AB454_RS05840 SM00363 S4 RNA-binding domain AB454_RS05865 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AB454_RS05870 SM00851 MGS-like domain AB454_RS05870 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB454_RS05870 SM01209 AB454_RS05870 AB454_RS05875 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AB454_RS05900 SM00072 Guanylate kinase homologues. AB454_RS05905 SM01409 AB454_RS05905 AB454_RS05915 SM00487 DEAD-like helicases superfamily AB454_RS05915 SM00490 helicase superfamily c-terminal domain AB454_RS05950 SM00331 Sigma factor PP2C-like phosphatases AB454_RS05950 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AB454_RS05955 SM00220 Serine/Threonine protein kinases, catalytic domain AB454_RS05955 SM00740 AB454_RS05955 AB454_RS05970 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AB454_RS05985 SM01120 AB454_RS05985 AB454_RS05985 SM01121 AB454_RS05985 AB454_RS05990 SM00487 DEAD-like helicases superfamily AB454_RS05990 SM00490 helicase superfamily c-terminal domain AB454_RS06005 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB454_RS06010 SM00822 AB454_RS06010 AB454_RS06025 SM00358 Double-stranded RNA binding motif AB454_RS06025 SM00535 Ribonuclease III family AB454_RS06030 SM00968 SMC proteins Flexible Hinge Domain AB454_RS06035 SM00382 ATPases associated with a variety of cellular activities AB454_RS06035 SM00962 SRP54-type protein, GTPase domain AB454_RS06035 SM00963 SRP54-type protein, helical bundle domain AB454_RS06045 SM00382 ATPases associated with a variety of cellular activities AB454_RS06045 SM00962 SRP54-type protein, GTPase domain AB454_RS06045 SM00963 SRP54-type protein, helical bundle domain AB454_RS06095 SM00881 CoA binding domain AB454_RS06100 SM00257 Lysin motif AB454_RS06115 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB454_RS06115 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB454_RS06115 SM00493 AB454_RS06115 AB454_RS06135 SM00382 ATPases associated with a variety of cellular activities AB454_RS06135 SM01086 C-terminal, D2-small domain, of ClpB protein AB454_RS06195 SM00479 AB454_RS06195 AB454_RS06195 SM00481 DNA polymerase alpha chain like domain AB454_RS06210 SM00316 Ribosomal protein S1-like RNA-binding domain AB454_RS06210 SM00322 K homology RNA-binding domain AB454_RS06240 SM00904 Riboflavin kinase AB454_RS06245 SM01387 AB454_RS06245 AB454_RS06250 SM00316 Ribosomal protein S1-like RNA-binding domain AB454_RS06250 SM00322 K homology RNA-binding domain AB454_RS06260 SM00849 Metallo-beta-lactamase superfamily AB454_RS06265 SM00382 ATPases associated with a variety of cellular activities AB454_RS06265 SM00843 AB454_RS06265 AB454_RS06270 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB454_RS06270 SM00866 AB454_RS06270 AB454_RS06295 SM00530 Helix-turn-helix XRE-family like proteins AB454_RS06305 SM00852 Probable molybdopterin binding domain AB454_RS06310 SM00382 ATPases associated with a variety of cellular activities AB454_RS06315 SM00322 K homology RNA-binding domain AB454_RS06315 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB454_RS06345 SM00729 Elongator protein 3, MiaB family, Radical SAM AB454_RS06360 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AB454_RS06360 SM00534 ATPase domain of DNA mismatch repair MUTS family AB454_RS06365 SM00853 MutL C terminal dimerisation domain AB454_RS06365 SM01340 AB454_RS06365 AB454_RS06420 SM00422 helix_turn_helix, mercury resistance AB454_RS06425 SM01230 AB454_RS06425 AB454_RS06525 SM00155 Phospholipase D. Active site motifs. AB454_RS06530 SM00382 ATPases associated with a variety of cellular activities AB454_RS06550 SM00421 helix_turn_helix, Lux Regulon AB454_RS06550 SM00448 cheY-homologous receiver domain AB454_RS06560 SM00318 Staphylococcal nuclease homologues AB454_RS06615 SM01060 AB454_RS06615 AB454_RS06630 SM01240 AB454_RS06630 AB454_RS06660 SM00861 Transketolase, pyrimidine binding domain AB454_RS06730 SM01207 AB454_RS06730 AB454_RS06735 SM00387 Histidine kinase-like ATPases AB454_RS06735 SM00433 TopoisomeraseII AB454_RS06740 SM00434 DNA Topoisomerase IV AB454_RS06755 SM01061 CAT RNA binding domain AB454_RS06865 SM00382 ATPases associated with a variety of cellular activities AB454_RS06870 SM00382 ATPases associated with a variety of cellular activities AB454_RS06905 SM00382 ATPases associated with a variety of cellular activities AB454_RS06935 SM00382 ATPases associated with a variety of cellular activities AB454_RS06945 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB454_RS06950 SM01130 AB454_RS06950 AB454_RS06970 SM01005 Alanine racemase, C-terminal domain AB454_RS06985 SM00357 Cold shock protein domain AB454_RS07025 SM00327 von Willebrand factor (vWF) type A domain AB454_RS07050 SM00861 Transketolase, pyrimidine binding domain AB454_RS07055 SM00387 Histidine kinase-like ATPases AB454_RS07055 SM00388 His Kinase A (phosphoacceptor) domain AB454_RS07060 SM00448 cheY-homologous receiver domain AB454_RS07060 SM00862 Transcriptional regulatory protein, C terminal AB454_RS07075 SM00014 Acid phosphatase homologues AB454_RS07095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB454_RS07095 SM00245 tail specific protease AB454_RS07140 SM00567 E-Z type HEAT repeats AB454_RS07140 SM00932 Scaffold protein Nfu/NifU N terminal AB454_RS07145 SM00932 Scaffold protein Nfu/NifU N terminal AB454_RS07190 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AB454_RS07190 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AB454_RS07195 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AB454_RS07195 SM00475 5'-3' exonuclease AB454_RS07220 SM00981 AB454_RS07220 AB454_RS07270 SM00478 endonuclease III AB454_RS07270 SM00525 AB454_RS07270 AB454_RS07285 SM00479 AB454_RS07285 AB454_RS07285 SM00491 AB454_RS07285 AB454_RS07320 SM00914 AB454_RS07320 AB454_RS07325 SM00028 Tetratricopeptide repeats AB454_RS07350 SM00562 AB454_RS07350 AB454_RS07375 SM00411 bacterial (prokaryotic) histone like domain AB454_RS07390 SM00316 Ribosomal protein S1-like RNA-binding domain AB454_RS07405 SM00870 AB454_RS07405 AB454_RS07420 SM00257 Lysin motif AB454_RS07425 SM00487 DEAD-like helicases superfamily AB454_RS07425 SM00490 helicase superfamily c-terminal domain AB454_RS07470 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB454_RS07470 SM00387 Histidine kinase-like ATPases AB454_RS07470 SM00388 His Kinase A (phosphoacceptor) domain AB454_RS07475 SM00448 cheY-homologous receiver domain AB454_RS07475 SM00862 Transcriptional regulatory protein, C terminal AB454_RS07480 SM00363 S4 RNA-binding domain AB454_RS07545 SM00342 helix_turn_helix, arabinose operon control protein AB454_RS07545 SM00871 Bacterial transcription activator, effector binding domain AB454_RS07550 SM00642 Alpha-amylase domain AB454_RS07555 SM00354 helix_turn _helix lactose operon repressor AB454_RS07570 SM01350 AB454_RS07570 AB454_RS07600 SM00861 Transketolase, pyrimidine binding domain AB454_RS07650 SM00878 Biotin carboxylase C-terminal domain AB454_RS07660 SM00841 Elongation factor P, C-terminal AB454_RS07660 SM01185 AB454_RS07660 AB454_RS07685 SM00450 Rhodanese Homology Domain AB454_RS07745 SM00849 Metallo-beta-lactamase superfamily AB454_RS07800 SM00382 ATPases associated with a variety of cellular activities AB454_RS07805 SM00518 AP endonuclease family 2 AB454_RS07810 SM00487 DEAD-like helicases superfamily AB454_RS07810 SM00490 helicase superfamily c-terminal domain AB454_RS07830 SM00400 zinc finger AB454_RS07830 SM00493 AB454_RS07830 AB454_RS07840 SM00116 Domain in cystathionine beta-synthase and other proteins. AB454_RS07900 SM00729 Elongator protein 3, MiaB family, Radical SAM AB454_RS07915 SM00271 DnaJ molecular chaperone homology domain AB454_RS07935 SM00729 Elongator protein 3, MiaB family, Radical SAM AB454_RS07950 SM00838 Elongation factor G C-terminus AB454_RS07965 SM00849 Metallo-beta-lactamase superfamily AB454_RS07975 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB454_RS07990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB454_RS08000 SM01103 AB454_RS08000 AB454_RS08050 SM00878 Biotin carboxylase C-terminal domain AB454_RS08060 SM00797 Allophanate hydrolase subunit 2 AB454_RS08065 SM00796 Allophanate hydrolase subunit 1 AB454_RS08100 SM00732 Likely ribonuclease with RNase H fold. AB454_RS08110 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB454_RS08115 SM00382 ATPases associated with a variety of cellular activities AB454_RS08120 SM00028 Tetratricopeptide repeats AB454_RS08160 SM00382 ATPases associated with a variety of cellular activities AB454_RS08190 SM00287 Bacterial SH3 domain homologues AB454_RS08190 SM00646 AB454_RS08190 AB454_RS08200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB454_RS08200 SM00954 Region found in RelA / SpoT proteins AB454_RS08220 SM01323 AB454_RS08220 AB454_RS08235 SM00382 ATPases associated with a variety of cellular activities AB454_RS08240 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB454_RS08345 SM01004 Delta-aminolevulinic acid dehydratase AB454_RS08375 SM00382 ATPases associated with a variety of cellular activities AB454_RS08375 SM00994 ClpX C4-type zinc finger AB454_RS08375 SM01086 C-terminal, D2-small domain, of ClpB protein AB454_RS08425 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB454_RS08450 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB454_RS08460 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AB454_RS08460 SM01232 AB454_RS08460 AB454_RS08465 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AB454_RS08465 SM00474 3'-5' exonuclease AB454_RS08465 SM00475 5'-3' exonuclease AB454_RS08465 SM00482 DNA polymerase A domain AB454_RS08475 SM00387 Histidine kinase-like ATPases AB454_RS08475 SM00388 His Kinase A (phosphoacceptor) domain AB454_RS08480 SM00448 cheY-homologous receiver domain AB454_RS08480 SM00862 Transcriptional regulatory protein, C terminal AB454_RS08490 SM01329 AB454_RS08490 AB454_RS08525 SM00919 Malic enzyme, NAD binding domain AB454_RS08525 SM01274 AB454_RS08525 AB454_RS08530 SM00481 DNA polymerase alpha chain like domain AB454_RS08550 SM00116 Domain in cystathionine beta-synthase and other proteins. AB454_RS08560 SM00849 Metallo-beta-lactamase superfamily AB454_RS08575 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AB454_RS08575 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AB454_RS08605 SM00981 AB454_RS08605 AB454_RS08625 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB454_RS08635 SM00363 S4 RNA-binding domain AB454_RS08635 SM01390 AB454_RS08635 AB454_RS08680 SM00563 Phosphate acyltransferases AB454_RS08685 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB454_RS08690 SM00363 S4 RNA-binding domain AB454_RS08735 SM00354 helix_turn _helix lactose operon repressor AB454_RS08745 SM00830 Chorismate mutase type II AB454_RS08770 SM00843 AB454_RS08770 AB454_RS08800 SM00849 Metallo-beta-lactamase superfamily AB454_RS08830 SM00363 S4 RNA-binding domain AB454_RS08850 SM00450 Rhodanese Homology Domain AB454_RS08865 SM00729 Elongator protein 3, MiaB family, Radical SAM AB454_RS08875 SM00347 helix_turn_helix multiple antibiotic resistance protein AB454_RS08925 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB454_RS08935 SM00047 Lysozyme subfamily 2 AB454_RS09020 SM01234 AB454_RS09020 AB454_RS09040 SM00894 Excalibur calcium-binding domain AB454_RS09175 SM00382 ATPases associated with a variety of cellular activities AB454_RS09190 SM01260 AB454_RS09190 AB454_RS09325 SM00382 ATPases associated with a variety of cellular activities AB454_RS09355 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB454_RS09390 SM00530 Helix-turn-helix XRE-family like proteins AB454_RS09395 SM00421 helix_turn_helix, Lux Regulon AB454_RS09395 SM00448 cheY-homologous receiver domain AB454_RS09445 SM00382 ATPases associated with a variety of cellular activities AB454_RS09450 SM00062 Bacterial periplasmic substrate-binding proteins AB454_RS09640 SM00382 ATPases associated with a variety of cellular activities AB454_RS09650 SM00478 endonuclease III AB454_RS09720 SM00226 Low molecular weight phosphatase family AB454_RS09735 SM00421 helix_turn_helix, Lux Regulon AB454_RS09735 SM00448 cheY-homologous receiver domain AB454_RS09740 SM00387 Histidine kinase-like ATPases AB454_RS09805 SM00479 AB454_RS09805 AB454_RS09825 SM00046 Diacylglycerol kinase catalytic domain (presumed) AB454_RS09840 SM00845 GatB domain AB454_RS09865 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB454_RS09865 SM00292 breast cancer carboxy-terminal domain AB454_RS09865 SM00532 Ligase N family AB454_RS09885 SM00998 Adenylosuccinate lyase C-terminus AB454_RS09945 SM00710 Parallel beta-helix repeats AB454_RS09955 SM01131 AB454_RS09955 AB454_RS10020 SM00382 ATPases associated with a variety of cellular activities AB454_RS10030 SM00382 ATPases associated with a variety of cellular activities AB454_RS10035 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB454_RS10090 SM00287 Bacterial SH3 domain homologues AB454_RS10180 SM00635 Bacterial Ig-like domain 2 AB454_RS10240 SM00507 HNH nucleases AB454_RS10375 SM00530 Helix-turn-helix XRE-family like proteins AB454_RS10465 SM00883 Chaperonin 10 Kd subunit AB454_RS10500 SM00793 Accessory gene regulator B AB454_RS10505 SM00794 Staphylococcal AgrD protein AB454_RS10515 SM00448 cheY-homologous receiver domain AB454_RS10515 SM00850 LytTr DNA-binding domain AB454_RS10530 SM00640 Glycosyl hydrolases family 32 AB454_RS10535 SM00354 helix_turn _helix lactose operon repressor AB454_RS10555 SM00881 CoA binding domain AB454_RS10560 SM00382 ATPases associated with a variety of cellular activities AB454_RS10570 SM00534 ATPase domain of DNA mismatch repair MUTS family AB454_RS10620 SM00917 LeuA allosteric (dimerisation) domain AB454_RS10625 SM01329 AB454_RS10625 AB454_RS10675 SM00731 SprT homologues. AB454_RS10680 SM00316 Ribosomal protein S1-like RNA-binding domain AB454_RS10680 SM00732 Likely ribonuclease with RNase H fold. AB454_RS10700 SM00331 Sigma factor PP2C-like phosphatases AB454_RS10700 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AB454_RS10720 SM01005 Alanine racemase, C-terminal domain AB454_RS10765 SM00387 Histidine kinase-like ATPases AB454_RS10765 SM00388 His Kinase A (phosphoacceptor) domain AB454_RS10770 SM00448 cheY-homologous receiver domain AB454_RS10770 SM00862 Transcriptional regulatory protein, C terminal AB454_RS10775 SM00487 DEAD-like helicases superfamily AB454_RS10775 SM00490 helicase superfamily c-terminal domain AB454_RS10810 SM00155 Phospholipase D. Active site motifs. AB454_RS10815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB454_RS10900 SM00382 ATPases associated with a variety of cellular activities AB454_RS10960 SM00226 Low molecular weight phosphatase family AB454_RS10975 SM00937 AB454_RS10975 AB454_RS10995 SM00357 Cold shock protein domain AB454_RS10995 SM00382 ATPases associated with a variety of cellular activities AB454_RS10995 SM00959 Rho termination factor, N-terminal domain AB454_RS11070 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AB454_RS11080 SM01133 AB454_RS11080 AB454_RS11120 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB454_RS11160 SM00382 ATPases associated with a variety of cellular activities AB454_RS11370 SM00829 Enoylreductase AB454_RS11375 SM00829 Enoylreductase AB454_RS11400 SM01133 AB454_RS11400 AB454_RS11415 SM00420 helix_turn_helix, Deoxyribose operon repressor AB454_RS11415 SM01134 AB454_RS11415 AB454_RS11445 SM00422 helix_turn_helix, mercury resistance AB454_RS11500 SM00382 ATPases associated with a variety of cellular activities AB454_RS11505 SM00382 ATPases associated with a variety of cellular activities AB454_RS11515 SM00662 RNA polymerases D AB454_RS11535 SM00316 Ribosomal protein S1-like RNA-binding domain AB454_RS11590 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB454_RS11595 SM01374 AB454_RS11595 AB454_RS11615 SM00322 K homology RNA-binding domain AB454_RS11630 SM01382 AB454_RS11630 AB454_RS11630 SM01383 AB454_RS11630 AB454_RS11650 SM01403 AB454_RS11650 AB454_RS11665 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB454_RS11665 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB454_RS11665 SM00493 AB454_RS11665 AB454_RS11725 SM00347 helix_turn_helix multiple antibiotic resistance protein AB454_RS11750 SM00729 Elongator protein 3, MiaB family, Radical SAM AB454_RS11775 SM00852 Probable molybdopterin binding domain AB454_RS11785 SM00852 Probable molybdopterin binding domain AB454_RS11795 SM00382 ATPases associated with a variety of cellular activities AB454_RS11860 SM00988 UreE urease accessory protein, N-terminal domain AB454_RS11900 SM00342 helix_turn_helix, arabinose operon control protein AB454_RS11955 SM00047 Lysozyme subfamily 2 AB454_RS11970 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB454_RS11970 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AB454_RS11985 SM00420 helix_turn_helix, Deoxyribose operon repressor AB454_RS12135 SM00382 ATPases associated with a variety of cellular activities AB454_RS12225 SM00347 helix_turn_helix multiple antibiotic resistance protein AB454_RS12235 SM00382 ATPases associated with a variety of cellular activities AB454_RS12245 SM00448 cheY-homologous receiver domain AB454_RS12245 SM00862 Transcriptional regulatory protein, C terminal AB454_RS12250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB454_RS12250 SM00387 Histidine kinase-like ATPases AB454_RS12250 SM00388 His Kinase A (phosphoacceptor) domain AB454_RS12255 SM00850 LytTr DNA-binding domain AB454_RS12290 SM00829 Enoylreductase AB454_RS12350 SM00342 helix_turn_helix, arabinose operon control protein AB454_RS12375 SM00347 helix_turn_helix multiple antibiotic resistance protein AB454_RS12395 SM00422 helix_turn_helix, mercury resistance AB454_RS12400 SM00421 helix_turn_helix, Lux Regulon AB454_RS12400 SM00448 cheY-homologous receiver domain AB454_RS12405 SM00387 Histidine kinase-like ATPases AB454_RS12430 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB454_RS12510 SM00382 ATPases associated with a variety of cellular activities AB454_RS12520 SM00062 Bacterial periplasmic substrate-binding proteins AB454_RS12520 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AB454_RS12540 SM00855 Phosphoglycerate mutase family AB454_RS12600 SM00729 Elongator protein 3, MiaB family, Radical SAM AB454_RS12600 SM00876 Biotin and Thiamin Synthesis associated domain AB454_RS12625 SM00382 ATPases associated with a variety of cellular activities AB454_RS12630 SM00382 ATPases associated with a variety of cellular activities AB454_RS12665 SM00871 Bacterial transcription activator, effector binding domain AB454_RS12745 SM00116 Domain in cystathionine beta-synthase and other proteins. AB454_RS12745 SM00382 ATPases associated with a variety of cellular activities AB454_RS12790 SM00382 ATPases associated with a variety of cellular activities AB454_RS12835 SM00382 ATPases associated with a variety of cellular activities AB454_RS12840 SM00382 ATPases associated with a variety of cellular activities AB454_RS12965 SM00487 DEAD-like helicases superfamily AB454_RS12965 SM00490 helicase superfamily c-terminal domain AB454_RS13005 SM01208 AB454_RS13005 AB454_RS13055 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB454_RS13055 SM00895 AB454_RS13055 AB454_RS13060 SM00422 helix_turn_helix, mercury resistance AB454_RS13065 SM00954 Region found in RelA / SpoT proteins AB454_RS13105 SM00382 ATPases associated with a variety of cellular activities AB454_RS13135 SM00347 helix_turn_helix multiple antibiotic resistance protein AB454_RS13165 SM00382 ATPases associated with a variety of cellular activities AB454_RS13290 SM00382 ATPases associated with a variety of cellular activities AB454_RS13290 SM01086 C-terminal, D2-small domain, of ClpB protein AB454_RS13305 SM00899 AB454_RS13305 AB454_RS13330 SM01266 AB454_RS13330 AB454_RS13530 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AB454_RS13715 SM00382 ATPases associated with a variety of cellular activities AB454_RS13720 SM00387 Histidine kinase-like ATPases AB454_RS13725 SM00448 cheY-homologous receiver domain AB454_RS13725 SM00862 Transcriptional regulatory protein, C terminal AB454_RS13735 SM00098 Alkaline phosphatase homologues AB454_RS13745 SM00347 helix_turn_helix multiple antibiotic resistance protein AB454_RS13830 SM00047 Lysozyme subfamily 2 AB454_RS13855 SM00957 SecA DEAD-like domain AB454_RS13855 SM00958 SecA preprotein cross-linking domain AB454_RS13885 SM00903 Flavin reductase like domain AB454_RS13905 SM00903 Flavin reductase like domain AB454_RS14030 SM00382 ATPases associated with a variety of cellular activities AB454_RS14045 SM00867 YceI-like domain AB454_RS14055 SM00450 Rhodanese Homology Domain AB454_RS14105 SM00382 ATPases associated with a variety of cellular activities AB454_RS14120 SM00357 Cold shock protein domain AB454_RS14125 SM00530 Helix-turn-helix XRE-family like proteins AB454_RS14140 SM00470 ParB-like nuclease domain AB454_RS14150 SM01228 AB454_RS14150 AB454_RS14175 SM00857 Resolvase, N terminal domain AB454_RS14195 SM00857 Resolvase, N terminal domain AB454_RS14215 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB454_RS14250 SM00530 Helix-turn-helix XRE-family like proteins AB454_RS14270 SM00382 ATPases associated with a variety of cellular activities