AB478_RS00005 SM00382 ATPases associated with a variety of cellular activities AB478_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AB478_RS00010 SM00480 DNA polymerase III beta subunit AB478_RS00025 SM00387 Histidine kinase-like ATPases AB478_RS00025 SM00433 TopoisomeraseII AB478_RS00030 SM00434 DNA Topoisomerase IV AB478_RS00075 SM00267 diguanylate cyclase AB478_RS00095 SM00788 Adenylosuccinate synthetase AB478_RS00110 SM00448 cheY-homologous receiver domain AB478_RS00110 SM00862 Transcriptional regulatory protein, C terminal AB478_RS00115 SM00091 PAS domain AB478_RS00115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB478_RS00115 SM00387 Histidine kinase-like ATPases AB478_RS00115 SM00388 His Kinase A (phosphoacceptor) domain AB478_RS00130 SM00849 Metallo-beta-lactamase superfamily AB478_RS00165 SM00344 helix_turn_helix ASNC type AB478_RS00215 SM00382 ATPases associated with a variety of cellular activities AB478_RS00235 SM00148 Phospholipase C, catalytic domain (part); domain X AB478_RS00245 SM00342 helix_turn_helix, arabinose operon control protein AB478_RS00275 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB478_RS00290 SM00257 Lysin motif AB478_RS00300 SM00347 helix_turn_helix multiple antibiotic resistance protein AB478_RS00360 SM00470 ParB-like nuclease domain AB478_RS00380 SM00822 AB478_RS00380 AB478_RS00420 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB478_RS00440 SM01133 AB478_RS00440 AB478_RS00460 SM00382 ATPases associated with a variety of cellular activities AB478_RS00465 SM00062 Bacterial periplasmic substrate-binding proteins AB478_RS00485 SM00530 Helix-turn-helix XRE-family like proteins AB478_RS00565 SM00984 UDP binding domain AB478_RS00605 SM00382 ATPases associated with a variety of cellular activities AB478_RS00655 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB478_RS00715 SM00487 DEAD-like helicases superfamily AB478_RS00725 SM00382 ATPases associated with a variety of cellular activities AB478_RS00765 SM00382 ATPases associated with a variety of cellular activities AB478_RS00810 SM00342 helix_turn_helix, arabinose operon control protein AB478_RS00810 SM00448 cheY-homologous receiver domain AB478_RS00880 SM00882 Coenzyme A transferase AB478_RS00965 SM00829 Enoylreductase AB478_RS00975 SM00829 Enoylreductase AB478_RS01025 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB478_RS01025 SM00387 Histidine kinase-like ATPases AB478_RS01030 SM00448 cheY-homologous receiver domain AB478_RS01030 SM00850 LytTr DNA-binding domain AB478_RS01045 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB478_RS01045 SM00866 AB478_RS01045 AB478_RS01095 SM00354 helix_turn _helix lactose operon repressor AB478_RS01120 SM00382 ATPases associated with a variety of cellular activities AB478_RS01305 SM00382 ATPases associated with a variety of cellular activities AB478_RS01340 SM01130 AB478_RS01340 AB478_RS01395 SM00506 Appr-1"-p processing enzyme AB478_RS01435 SM00347 helix_turn_helix multiple antibiotic resistance protein AB478_RS01515 SM00530 Helix-turn-helix XRE-family like proteins AB478_RS01525 SM00382 ATPases associated with a variety of cellular activities AB478_RS01575 SM00470 ParB-like nuclease domain AB478_RS01600 SM00382 ATPases associated with a variety of cellular activities AB478_RS01670 SM00855 Phosphoglycerate mutase family AB478_RS01745 SM00116 Domain in cystathionine beta-synthase and other proteins. AB478_RS01745 SM01240 AB478_RS01745 AB478_RS01835 SM01321 AB478_RS01835 AB478_RS01930 SM00382 ATPases associated with a variety of cellular activities AB478_RS01985 SM00833 Cobalamin synthesis protein cobW C-terminal domain AB478_RS02035 SM00014 Acid phosphatase homologues AB478_RS02060 SM00382 ATPases associated with a variety of cellular activities AB478_RS02060 SM00930 AB478_RS02060 AB478_RS02075 SM00257 Lysin motif AB478_RS02130 SM00642 Alpha-amylase domain AB478_RS02135 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB478_RS02135 SM00866 AB478_RS02135 AB478_RS02155 SM00382 ATPases associated with a variety of cellular activities AB478_RS02165 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB478_RS02165 SM00493 AB478_RS02165 AB478_RS02225 SM00465 GIY-YIG type nucleases (URI domain) AB478_RS02245 SM00493 AB478_RS02245 AB478_RS02250 SM00650 Ribosomal RNA adenine dimethylases AB478_RS02280 SM01321 AB478_RS02280 AB478_RS02295 SM01400 AB478_RS02295 AB478_RS02310 SM00487 DEAD-like helicases superfamily AB478_RS02310 SM00490 helicase superfamily c-terminal domain AB478_RS02310 SM00982 AB478_RS02310 AB478_RS02310 SM01058 CarD-like/TRCF domain AB478_RS02325 SM00363 S4 RNA-binding domain AB478_RS02335 SM00316 Ribosomal protein S1-like RNA-binding domain AB478_RS02340 SM00977 TilS substrate C-terminal domain AB478_RS02350 SM00382 ATPases associated with a variety of cellular activities AB478_RS02370 SM00905 Dihydroneopterin aldolase AB478_RS02470 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB478_RS02505 SM00382 ATPases associated with a variety of cellular activities AB478_RS02505 SM01086 C-terminal, D2-small domain, of ClpB protein AB478_RS02510 SM00382 ATPases associated with a variety of cellular activities AB478_RS02515 SM00670 Large family of predicted nucleotide-binding domains AB478_RS02535 SM00840 AB478_RS02535 AB478_RS02540 SM00535 Ribonuclease III family AB478_RS02545 SM00967 RNA 2'-O ribose methyltransferase substrate binding AB478_RS02570 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AB478_RS02570 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB478_RS02575 SM00649 Ribosomal protein L11/L12 AB478_RS02610 SM00663 RNA polymerase I subunit A N-terminus AB478_RS02630 SM00838 Elongation factor G C-terminus AB478_RS02630 SM00889 Elongation factor G, domain IV AB478_RS02740 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AB478_RS02795 SM00986 Uracil DNA glycosylase superfamily AB478_RS02795 SM00987 UreE urease accessory protein, C-terminal domain AB478_RS02940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB478_RS02950 SM00829 Enoylreductase AB478_RS02960 SM00836 DALR anticodon binding domain AB478_RS02960 SM01016 Arginyl tRNA synthetase N terminal dom AB478_RS02965 SM00478 endonuclease III AB478_RS03080 SM00382 ATPases associated with a variety of cellular activities AB478_RS03085 SM00529 Helix-turn-helix diphteria tox regulatory element AB478_RS03085 SM00899 AB478_RS03085 AB478_RS03100 SM00382 ATPases associated with a variety of cellular activities AB478_RS03130 SM00382 ATPases associated with a variety of cellular activities AB478_RS03150 SM00382 ATPases associated with a variety of cellular activities AB478_RS03170 SM01120 AB478_RS03170 AB478_RS03215 SM00448 cheY-homologous receiver domain AB478_RS03215 SM00862 Transcriptional regulatory protein, C terminal AB478_RS03220 SM00387 Histidine kinase-like ATPases AB478_RS03225 SM00382 ATPases associated with a variety of cellular activities AB478_RS03245 SM00257 Lysin motif AB478_RS03255 SM00342 helix_turn_helix, arabinose operon control protein AB478_RS03345 SM00382 ATPases associated with a variety of cellular activities AB478_RS03350 SM00382 ATPases associated with a variety of cellular activities AB478_RS03355 SM00347 helix_turn_helix multiple antibiotic resistance protein AB478_RS03360 SM00833 Cobalamin synthesis protein cobW C-terminal domain AB478_RS03415 SM00420 helix_turn_helix, Deoxyribose operon repressor AB478_RS03415 SM01134 AB478_RS03415 AB478_RS03435 SM01091 Transporter associated domain AB478_RS03450 SM00387 Histidine kinase-like ATPases AB478_RS03450 SM00388 His Kinase A (phosphoacceptor) domain AB478_RS03455 SM00448 cheY-homologous receiver domain AB478_RS03455 SM00862 Transcriptional regulatory protein, C terminal AB478_RS03510 SM00796 Allophanate hydrolase subunit 1 AB478_RS03515 SM00797 Allophanate hydrolase subunit 2 AB478_RS03525 SM00382 ATPases associated with a variety of cellular activities AB478_RS03530 SM00341 Helicase and RNase D C-terminal AB478_RS03530 SM00487 DEAD-like helicases superfamily AB478_RS03530 SM00490 helicase superfamily c-terminal domain AB478_RS03530 SM00956 AB478_RS03530 AB478_RS03535 SM00382 ATPases associated with a variety of cellular activities AB478_RS03560 SM00046 Diacylglycerol kinase catalytic domain (presumed) AB478_RS03625 SM00382 ATPases associated with a variety of cellular activities AB478_RS03680 SM00267 diguanylate cyclase AB478_RS03700 SM00487 DEAD-like helicases superfamily AB478_RS03700 SM00490 helicase superfamily c-terminal domain AB478_RS03715 SM00957 SecA DEAD-like domain AB478_RS03715 SM00958 SecA preprotein cross-linking domain AB478_RS03735 SM00257 Lysin motif AB478_RS03750 SM00487 DEAD-like helicases superfamily AB478_RS03750 SM00490 helicase superfamily c-terminal domain AB478_RS03780 SM00028 Tetratricopeptide repeats AB478_RS03820 SM00919 Malic enzyme, NAD binding domain AB478_RS03820 SM01274 AB478_RS03820 AB478_RS03845 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB478_RS03865 SM01192 AB478_RS03865 AB478_RS03865 SM01193 AB478_RS03865 AB478_RS03885 SM00316 Ribosomal protein S1-like RNA-binding domain AB478_RS03885 SM00357 Cold shock protein domain AB478_RS03885 SM00955 AB478_RS03885 AB478_RS04030 SM00318 Staphylococcal nuclease homologues AB478_RS04035 SM00357 Cold shock protein domain AB478_RS04080 SM00855 Phosphoglycerate mutase family AB478_RS04135 SM00493 AB478_RS04135 AB478_RS04145 SM00382 ATPases associated with a variety of cellular activities AB478_RS04145 SM00930 AB478_RS04145 AB478_RS04185 SM00530 Helix-turn-helix XRE-family like proteins AB478_RS04190 SM00530 Helix-turn-helix XRE-family like proteins AB478_RS04215 SM00942 Primase C terminal 1 (PriCT-1) AB478_RS04320 SM00382 ATPases associated with a variety of cellular activities AB478_RS04390 SM00729 Elongator protein 3, MiaB family, Radical SAM AB478_RS04535 SM01298 AB478_RS04535 AB478_RS04545 SM00316 Ribosomal protein S1-like RNA-binding domain AB478_RS04560 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AB478_RS04645 SM00382 ATPases associated with a variety of cellular activities AB478_RS04645 SM01086 C-terminal, D2-small domain, of ClpB protein AB478_RS04690 SM00825 Beta-ketoacyl synthase AB478_RS04710 SM00382 ATPases associated with a variety of cellular activities AB478_RS04715 SM00382 ATPases associated with a variety of cellular activities AB478_RS04730 SM00382 ATPases associated with a variety of cellular activities AB478_RS04735 SM00382 ATPases associated with a variety of cellular activities AB478_RS04790 SM01118 AB478_RS04790 AB478_RS04800 SM00954 Region found in RelA / SpoT proteins AB478_RS04815 SM00116 Domain in cystathionine beta-synthase and other proteins. AB478_RS04815 SM00924 MgtE intracellular N domain AB478_RS04890 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB478_RS04920 SM00914 AB478_RS04920 AB478_RS04970 SM00382 ATPases associated with a variety of cellular activities AB478_RS05065 SM00347 helix_turn_helix multiple antibiotic resistance protein AB478_RS05075 SM00047 Lysozyme subfamily 2 AB478_RS05075 SM00644 AB478_RS05075 AB478_RS05135 SM01001 AIR carboxylase AB478_RS05155 SM01211 AB478_RS05155 AB478_RS05180 SM00798 AICARFT/IMPCHase bienzyme AB478_RS05180 SM00851 MGS-like domain AB478_RS05185 SM01209 AB478_RS05185 AB478_RS05185 SM01210 AB478_RS05185 AB478_RS05200 SM00382 ATPases associated with a variety of cellular activities AB478_RS05265 SM00849 Metallo-beta-lactamase superfamily AB478_RS05295 SM00861 Transketolase, pyrimidine binding domain AB478_RS05315 SM00530 Helix-turn-helix XRE-family like proteins AB478_RS05320 SM00382 ATPases associated with a variety of cellular activities AB478_RS05360 SM01321 AB478_RS05360 AB478_RS05380 SM00838 Elongation factor G C-terminus AB478_RS05405 SM00878 Biotin carboxylase C-terminal domain AB478_RS05490 SM00857 Resolvase, N terminal domain AB478_RS05505 SM00530 Helix-turn-helix XRE-family like proteins AB478_RS05510 SM00530 Helix-turn-helix XRE-family like proteins AB478_RS05760 SM00047 Lysozyme subfamily 2 AB478_RS05780 SM00287 Bacterial SH3 domain homologues AB478_RS05780 SM00644 AB478_RS05780 AB478_RS05785 SM00725 NEAr Transporter domain AB478_RS05790 SM00725 NEAr Transporter domain AB478_RS05795 SM00725 NEAr Transporter domain AB478_RS05830 SM00967 RNA 2'-O ribose methyltransferase substrate binding AB478_RS05840 SM00873 B3/4 domain AB478_RS05840 SM00874 tRNA synthetase B5 domain AB478_RS05840 SM00896 Ferredoxin-fold anticodon binding domain AB478_RS05865 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB478_RS05865 SM00481 DNA polymerase alpha chain like domain AB478_RS05865 SM00483 DNA polymerase X family AB478_RS05870 SM00463 Small MutS-related domain AB478_RS05870 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AB478_RS05870 SM00534 ATPase domain of DNA mismatch repair MUTS family AB478_RS05885 SM00465 GIY-YIG type nucleases (URI domain) AB478_RS06080 SM00740 AB478_RS06080 AB478_RS06100 SM00842 Cell division protein FtsA AB478_RS06105 SM00864 Tubulin/FtsZ family, GTPase domain AB478_RS06105 SM00865 Tubulin/FtsZ family, C-terminal domain AB478_RS06130 SM00363 S4 RNA-binding domain AB478_RS06160 SM00363 S4 RNA-binding domain AB478_RS06185 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AB478_RS06190 SM00851 MGS-like domain AB478_RS06190 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AB478_RS06190 SM01209 AB478_RS06190 AB478_RS06195 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AB478_RS06220 SM00072 Guanylate kinase homologues. AB478_RS06225 SM01409 AB478_RS06225 AB478_RS06235 SM00487 DEAD-like helicases superfamily AB478_RS06235 SM00490 helicase superfamily c-terminal domain AB478_RS06270 SM00331 Sigma factor PP2C-like phosphatases AB478_RS06270 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AB478_RS06275 SM00220 Serine/Threonine protein kinases, catalytic domain AB478_RS06275 SM00740 AB478_RS06275 AB478_RS06290 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AB478_RS06305 SM01120 AB478_RS06305 AB478_RS06305 SM01121 AB478_RS06305 AB478_RS06315 SM00487 DEAD-like helicases superfamily AB478_RS06315 SM00490 helicase superfamily c-terminal domain AB478_RS06330 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AB478_RS06335 SM00822 AB478_RS06335 AB478_RS06350 SM00358 Double-stranded RNA binding motif AB478_RS06350 SM00535 Ribonuclease III family AB478_RS06355 SM00968 SMC proteins Flexible Hinge Domain AB478_RS06360 SM00382 ATPases associated with a variety of cellular activities AB478_RS06360 SM00962 SRP54-type protein, GTPase domain AB478_RS06360 SM00963 SRP54-type protein, helical bundle domain AB478_RS06370 SM00382 ATPases associated with a variety of cellular activities AB478_RS06370 SM00962 SRP54-type protein, GTPase domain AB478_RS06370 SM00963 SRP54-type protein, helical bundle domain AB478_RS06415 SM00881 CoA binding domain AB478_RS06435 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB478_RS06435 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB478_RS06435 SM00493 AB478_RS06435 AB478_RS06455 SM00382 ATPases associated with a variety of cellular activities AB478_RS06455 SM01086 C-terminal, D2-small domain, of ClpB protein AB478_RS06515 SM00479 AB478_RS06515 AB478_RS06515 SM00481 DNA polymerase alpha chain like domain AB478_RS06530 SM00316 Ribosomal protein S1-like RNA-binding domain AB478_RS06530 SM00322 K homology RNA-binding domain AB478_RS06560 SM00904 Riboflavin kinase AB478_RS06565 SM01387 AB478_RS06565 AB478_RS06570 SM00316 Ribosomal protein S1-like RNA-binding domain AB478_RS06570 SM00322 K homology RNA-binding domain AB478_RS06580 SM00849 Metallo-beta-lactamase superfamily AB478_RS06585 SM00382 ATPases associated with a variety of cellular activities AB478_RS06585 SM00843 AB478_RS06585 AB478_RS06590 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB478_RS06590 SM00866 AB478_RS06590 AB478_RS06615 SM00530 Helix-turn-helix XRE-family like proteins AB478_RS06630 SM00852 Probable molybdopterin binding domain AB478_RS06635 SM00382 ATPases associated with a variety of cellular activities AB478_RS06640 SM00322 K homology RNA-binding domain AB478_RS06640 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB478_RS06670 SM00729 Elongator protein 3, MiaB family, Radical SAM AB478_RS06685 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AB478_RS06685 SM00534 ATPase domain of DNA mismatch repair MUTS family AB478_RS06690 SM00853 MutL C terminal dimerisation domain AB478_RS06690 SM01340 AB478_RS06690 AB478_RS06745 SM00422 helix_turn_helix, mercury resistance AB478_RS06750 SM01230 AB478_RS06750 AB478_RS06775 SM00382 ATPases associated with a variety of cellular activities AB478_RS06845 SM00155 Phospholipase D. Active site motifs. AB478_RS06860 SM00318 Staphylococcal nuclease homologues AB478_RS06915 SM01060 AB478_RS06915 AB478_RS06930 SM01240 AB478_RS06930 AB478_RS06960 SM00861 Transketolase, pyrimidine binding domain AB478_RS07025 SM01207 AB478_RS07025 AB478_RS07030 SM00387 Histidine kinase-like ATPases AB478_RS07030 SM00433 TopoisomeraseII AB478_RS07035 SM00434 DNA Topoisomerase IV AB478_RS07050 SM01061 CAT RNA binding domain AB478_RS07155 SM00382 ATPases associated with a variety of cellular activities AB478_RS07160 SM00382 ATPases associated with a variety of cellular activities AB478_RS07195 SM00382 ATPases associated with a variety of cellular activities AB478_RS07220 SM00382 ATPases associated with a variety of cellular activities AB478_RS07230 SM00859 Semialdehyde dehydrogenase, NAD binding domain AB478_RS07235 SM01130 AB478_RS07235 AB478_RS07255 SM01005 Alanine racemase, C-terminal domain AB478_RS07275 SM00357 Cold shock protein domain AB478_RS07310 SM00327 von Willebrand factor (vWF) type A domain AB478_RS07335 SM00861 Transketolase, pyrimidine binding domain AB478_RS07340 SM00387 Histidine kinase-like ATPases AB478_RS07340 SM00388 His Kinase A (phosphoacceptor) domain AB478_RS07345 SM00448 cheY-homologous receiver domain AB478_RS07345 SM00862 Transcriptional regulatory protein, C terminal AB478_RS07355 SM00014 Acid phosphatase homologues AB478_RS07370 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB478_RS07370 SM00245 tail specific protease AB478_RS07415 SM00567 E-Z type HEAT repeats AB478_RS07415 SM00932 Scaffold protein Nfu/NifU N terminal AB478_RS07420 SM00932 Scaffold protein Nfu/NifU N terminal AB478_RS07460 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AB478_RS07460 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AB478_RS07465 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AB478_RS07465 SM00475 5'-3' exonuclease AB478_RS07485 SM00981 AB478_RS07485 AB478_RS07535 SM00478 endonuclease III AB478_RS07535 SM00525 AB478_RS07535 AB478_RS07550 SM00479 AB478_RS07550 AB478_RS07550 SM00491 AB478_RS07550 AB478_RS07585 SM00914 AB478_RS07585 AB478_RS07590 SM00028 Tetratricopeptide repeats AB478_RS07615 SM00562 AB478_RS07615 AB478_RS07640 SM00411 bacterial (prokaryotic) histone like domain AB478_RS07655 SM00316 Ribosomal protein S1-like RNA-binding domain AB478_RS07680 SM00870 AB478_RS07680 AB478_RS07695 SM00257 Lysin motif AB478_RS07700 SM00487 DEAD-like helicases superfamily AB478_RS07700 SM00490 helicase superfamily c-terminal domain AB478_RS07740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB478_RS07740 SM00387 Histidine kinase-like ATPases AB478_RS07740 SM00388 His Kinase A (phosphoacceptor) domain AB478_RS07745 SM00448 cheY-homologous receiver domain AB478_RS07745 SM00862 Transcriptional regulatory protein, C terminal AB478_RS07750 SM00363 S4 RNA-binding domain AB478_RS07815 SM00342 helix_turn_helix, arabinose operon control protein AB478_RS07815 SM00871 Bacterial transcription activator, effector binding domain AB478_RS07820 SM00642 Alpha-amylase domain AB478_RS07825 SM00354 helix_turn _helix lactose operon repressor AB478_RS07840 SM01350 AB478_RS07840 AB478_RS07870 SM00861 Transketolase, pyrimidine binding domain AB478_RS07920 SM00878 Biotin carboxylase C-terminal domain AB478_RS07930 SM00841 Elongation factor P, C-terminal AB478_RS07930 SM01185 AB478_RS07930 AB478_RS07955 SM00450 Rhodanese Homology Domain AB478_RS08015 SM00849 Metallo-beta-lactamase superfamily AB478_RS08070 SM00382 ATPases associated with a variety of cellular activities AB478_RS08075 SM00518 AP endonuclease family 2 AB478_RS08080 SM00487 DEAD-like helicases superfamily AB478_RS08080 SM00490 helicase superfamily c-terminal domain AB478_RS08100 SM00400 zinc finger AB478_RS08100 SM00493 AB478_RS08100 AB478_RS08110 SM00116 Domain in cystathionine beta-synthase and other proteins. AB478_RS08170 SM00729 Elongator protein 3, MiaB family, Radical SAM AB478_RS08185 SM00271 DnaJ molecular chaperone homology domain AB478_RS08205 SM00729 Elongator protein 3, MiaB family, Radical SAM AB478_RS08215 SM00838 Elongation factor G C-terminus AB478_RS08230 SM00849 Metallo-beta-lactamase superfamily AB478_RS08240 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB478_RS08255 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB478_RS08265 SM01103 AB478_RS08265 AB478_RS08295 SM01321 AB478_RS08295 AB478_RS08325 SM00878 Biotin carboxylase C-terminal domain AB478_RS08335 SM00797 Allophanate hydrolase subunit 2 AB478_RS08340 SM00796 Allophanate hydrolase subunit 1 AB478_RS08375 SM00732 Likely ribonuclease with RNase H fold. AB478_RS08385 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB478_RS08390 SM00382 ATPases associated with a variety of cellular activities AB478_RS08395 SM00028 Tetratricopeptide repeats AB478_RS08430 SM00382 ATPases associated with a variety of cellular activities AB478_RS08460 SM00287 Bacterial SH3 domain homologues AB478_RS08460 SM00646 AB478_RS08460 AB478_RS08470 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB478_RS08470 SM00954 Region found in RelA / SpoT proteins AB478_RS08490 SM01323 AB478_RS08490 AB478_RS08505 SM00382 ATPases associated with a variety of cellular activities AB478_RS08510 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB478_RS08615 SM01004 Delta-aminolevulinic acid dehydratase AB478_RS08645 SM00382 ATPases associated with a variety of cellular activities AB478_RS08645 SM00994 ClpX C4-type zinc finger AB478_RS08645 SM01086 C-terminal, D2-small domain, of ClpB protein AB478_RS08695 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AB478_RS08720 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AB478_RS08730 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AB478_RS08730 SM01232 AB478_RS08730 AB478_RS08735 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AB478_RS08735 SM00474 3'-5' exonuclease AB478_RS08735 SM00475 5'-3' exonuclease AB478_RS08735 SM00482 DNA polymerase A domain AB478_RS08745 SM00387 Histidine kinase-like ATPases AB478_RS08745 SM00388 His Kinase A (phosphoacceptor) domain AB478_RS08750 SM00448 cheY-homologous receiver domain AB478_RS08750 SM00862 Transcriptional regulatory protein, C terminal AB478_RS08760 SM01329 AB478_RS08760 AB478_RS08795 SM00919 Malic enzyme, NAD binding domain AB478_RS08795 SM01274 AB478_RS08795 AB478_RS08800 SM00481 DNA polymerase alpha chain like domain AB478_RS08815 SM00116 Domain in cystathionine beta-synthase and other proteins. AB478_RS08825 SM00849 Metallo-beta-lactamase superfamily AB478_RS08840 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AB478_RS08840 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AB478_RS08870 SM00981 AB478_RS08870 AB478_RS08885 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AB478_RS08895 SM00363 S4 RNA-binding domain AB478_RS08895 SM01390 AB478_RS08895 AB478_RS08945 SM00563 Phosphate acyltransferases AB478_RS08950 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AB478_RS08955 SM00363 S4 RNA-binding domain AB478_RS08970 SM00725 NEAr Transporter domain AB478_RS09000 SM00354 helix_turn _helix lactose operon repressor AB478_RS09010 SM00830 Chorismate mutase type II AB478_RS09035 SM00843 AB478_RS09035 AB478_RS09065 SM00849 Metallo-beta-lactamase superfamily AB478_RS09095 SM00363 S4 RNA-binding domain AB478_RS09115 SM00450 Rhodanese Homology Domain AB478_RS09130 SM00729 Elongator protein 3, MiaB family, Radical SAM AB478_RS09140 SM00347 helix_turn_helix multiple antibiotic resistance protein AB478_RS09190 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB478_RS09200 SM00226 Low molecular weight phosphatase family AB478_RS09205 SM00047 Lysozyme subfamily 2 AB478_RS09290 SM01234 AB478_RS09290 AB478_RS09310 SM00894 Excalibur calcium-binding domain AB478_RS09385 SM00287 Bacterial SH3 domain homologues AB478_RS09390 SM00382 ATPases associated with a variety of cellular activities AB478_RS09500 SM00382 ATPases associated with a variety of cellular activities AB478_RS09530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB478_RS09560 SM00530 Helix-turn-helix XRE-family like proteins AB478_RS09565 SM00421 helix_turn_helix, Lux Regulon AB478_RS09565 SM00448 cheY-homologous receiver domain AB478_RS09625 SM00382 ATPases associated with a variety of cellular activities AB478_RS09630 SM00062 Bacterial periplasmic substrate-binding proteins AB478_RS09815 SM00382 ATPases associated with a variety of cellular activities AB478_RS09825 SM00478 endonuclease III AB478_RS09895 SM00226 Low molecular weight phosphatase family AB478_RS09910 SM00421 helix_turn_helix, Lux Regulon AB478_RS09910 SM00448 cheY-homologous receiver domain AB478_RS09915 SM00387 Histidine kinase-like ATPases AB478_RS09975 SM00479 AB478_RS09975 AB478_RS09995 SM00046 Diacylglycerol kinase catalytic domain (presumed) AB478_RS10005 SM00845 GatB domain AB478_RS10030 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AB478_RS10030 SM00292 breast cancer carboxy-terminal domain AB478_RS10030 SM00532 Ligase N family AB478_RS10050 SM00998 Adenylosuccinate lyase C-terminus AB478_RS10110 SM00710 Parallel beta-helix repeats AB478_RS10120 SM01131 AB478_RS10120 AB478_RS10180 SM00382 ATPases associated with a variety of cellular activities AB478_RS10190 SM00382 ATPases associated with a variety of cellular activities AB478_RS10195 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB478_RS10250 SM00883 Chaperonin 10 Kd subunit AB478_RS10280 SM00793 Accessory gene regulator B AB478_RS10285 SM00794 Staphylococcal AgrD protein AB478_RS10295 SM00448 cheY-homologous receiver domain AB478_RS10295 SM00850 LytTr DNA-binding domain AB478_RS10310 SM00640 Glycosyl hydrolases family 32 AB478_RS10315 SM00354 helix_turn _helix lactose operon repressor AB478_RS10335 SM00881 CoA binding domain AB478_RS10340 SM00382 ATPases associated with a variety of cellular activities AB478_RS10355 SM00534 ATPase domain of DNA mismatch repair MUTS family AB478_RS10405 SM00917 LeuA allosteric (dimerisation) domain AB478_RS10410 SM01329 AB478_RS10410 AB478_RS10465 SM00731 SprT homologues. AB478_RS10470 SM00316 Ribosomal protein S1-like RNA-binding domain AB478_RS10470 SM00732 Likely ribonuclease with RNase H fold. AB478_RS10490 SM00331 Sigma factor PP2C-like phosphatases AB478_RS10490 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AB478_RS10510 SM01005 Alanine racemase, C-terminal domain AB478_RS10555 SM00387 Histidine kinase-like ATPases AB478_RS10555 SM00388 His Kinase A (phosphoacceptor) domain AB478_RS10560 SM00448 cheY-homologous receiver domain AB478_RS10560 SM00862 Transcriptional regulatory protein, C terminal AB478_RS10565 SM00487 DEAD-like helicases superfamily AB478_RS10565 SM00490 helicase superfamily c-terminal domain AB478_RS10600 SM00155 Phospholipase D. Active site motifs. AB478_RS10605 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AB478_RS10655 SM00382 ATPases associated with a variety of cellular activities AB478_RS10700 SM00382 ATPases associated with a variety of cellular activities AB478_RS10760 SM00226 Low molecular weight phosphatase family AB478_RS10775 SM00937 AB478_RS10775 AB478_RS10795 SM00357 Cold shock protein domain AB478_RS10795 SM00382 ATPases associated with a variety of cellular activities AB478_RS10795 SM00959 Rho termination factor, N-terminal domain AB478_RS10870 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AB478_RS10880 SM01133 AB478_RS10880 AB478_RS10920 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AB478_RS10960 SM00382 ATPases associated with a variety of cellular activities AB478_RS11175 SM00829 Enoylreductase AB478_RS11200 SM01133 AB478_RS11200 AB478_RS11215 SM00420 helix_turn_helix, Deoxyribose operon repressor AB478_RS11215 SM01134 AB478_RS11215 AB478_RS11240 SM00422 helix_turn_helix, mercury resistance AB478_RS11320 SM00382 ATPases associated with a variety of cellular activities AB478_RS11325 SM00382 ATPases associated with a variety of cellular activities AB478_RS11335 SM00662 RNA polymerases D AB478_RS11355 SM00316 Ribosomal protein S1-like RNA-binding domain AB478_RS11410 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AB478_RS11415 SM01374 AB478_RS11415 AB478_RS11435 SM00322 K homology RNA-binding domain AB478_RS11450 SM01382 AB478_RS11450 AB478_RS11450 SM01383 AB478_RS11450 AB478_RS11470 SM01403 AB478_RS11470 AB478_RS11485 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AB478_RS11485 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AB478_RS11485 SM00493 AB478_RS11485 AB478_RS11545 SM00347 helix_turn_helix multiple antibiotic resistance protein AB478_RS11570 SM00729 Elongator protein 3, MiaB family, Radical SAM AB478_RS11595 SM00852 Probable molybdopterin binding domain AB478_RS11605 SM00852 Probable molybdopterin binding domain AB478_RS11615 SM00382 ATPases associated with a variety of cellular activities AB478_RS11685 SM00988 UreE urease accessory protein, N-terminal domain AB478_RS11725 SM00342 helix_turn_helix, arabinose operon control protein AB478_RS11780 SM00047 Lysozyme subfamily 2 AB478_RS11795 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB478_RS11795 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AB478_RS11810 SM00420 helix_turn_helix, Deoxyribose operon repressor AB478_RS11955 SM00382 ATPases associated with a variety of cellular activities AB478_RS12050 SM00347 helix_turn_helix multiple antibiotic resistance protein AB478_RS12060 SM00382 ATPases associated with a variety of cellular activities AB478_RS12070 SM00448 cheY-homologous receiver domain AB478_RS12070 SM00862 Transcriptional regulatory protein, C terminal AB478_RS12075 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AB478_RS12075 SM00387 Histidine kinase-like ATPases AB478_RS12075 SM00388 His Kinase A (phosphoacceptor) domain AB478_RS12080 SM00850 LytTr DNA-binding domain AB478_RS12095 SM00382 ATPases associated with a variety of cellular activities AB478_RS12130 SM00829 Enoylreductase AB478_RS12185 SM00342 helix_turn_helix, arabinose operon control protein AB478_RS12210 SM00347 helix_turn_helix multiple antibiotic resistance protein AB478_RS12230 SM00422 helix_turn_helix, mercury resistance AB478_RS12235 SM00421 helix_turn_helix, Lux Regulon AB478_RS12235 SM00448 cheY-homologous receiver domain AB478_RS12240 SM00387 Histidine kinase-like ATPases AB478_RS12265 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AB478_RS12345 SM00382 ATPases associated with a variety of cellular activities AB478_RS12355 SM00062 Bacterial periplasmic substrate-binding proteins AB478_RS12355 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AB478_RS12375 SM00855 Phosphoglycerate mutase family AB478_RS12430 SM00729 Elongator protein 3, MiaB family, Radical SAM AB478_RS12430 SM00876 Biotin and Thiamin Synthesis associated domain AB478_RS12455 SM00382 ATPases associated with a variety of cellular activities AB478_RS12460 SM00382 ATPases associated with a variety of cellular activities AB478_RS12490 SM00871 Bacterial transcription activator, effector binding domain AB478_RS12565 SM00116 Domain in cystathionine beta-synthase and other proteins. AB478_RS12565 SM00382 ATPases associated with a variety of cellular activities AB478_RS12600 SM00382 ATPases associated with a variety of cellular activities AB478_RS12640 SM00382 ATPases associated with a variety of cellular activities AB478_RS12645 SM00382 ATPases associated with a variety of cellular activities AB478_RS12790 SM00487 DEAD-like helicases superfamily AB478_RS12790 SM00490 helicase superfamily c-terminal domain AB478_RS12825 SM01208 AB478_RS12825 AB478_RS12870 SM00345 helix_turn_helix gluconate operon transcriptional repressor AB478_RS12870 SM00895 AB478_RS12870 AB478_RS12875 SM00422 helix_turn_helix, mercury resistance AB478_RS12880 SM00954 Region found in RelA / SpoT proteins AB478_RS12925 SM00382 ATPases associated with a variety of cellular activities AB478_RS12985 SM00347 helix_turn_helix multiple antibiotic resistance protein AB478_RS12995 SM01321 AB478_RS12995 AB478_RS13020 SM00382 ATPases associated with a variety of cellular activities AB478_RS13145 SM00382 ATPases associated with a variety of cellular activities AB478_RS13145 SM01086 C-terminal, D2-small domain, of ClpB protein AB478_RS13160 SM00899 AB478_RS13160 AB478_RS13185 SM01266 AB478_RS13185 AB478_RS13380 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AB478_RS13565 SM00382 ATPases associated with a variety of cellular activities AB478_RS13570 SM00387 Histidine kinase-like ATPases AB478_RS13575 SM00448 cheY-homologous receiver domain AB478_RS13575 SM00862 Transcriptional regulatory protein, C terminal AB478_RS13585 SM00098 Alkaline phosphatase homologues AB478_RS13595 SM00347 helix_turn_helix multiple antibiotic resistance protein AB478_RS13680 SM00047 Lysozyme subfamily 2 AB478_RS13705 SM00957 SecA DEAD-like domain AB478_RS13705 SM00958 SecA preprotein cross-linking domain AB478_RS13735 SM00903 Flavin reductase like domain AB478_RS13765 SM00903 Flavin reductase like domain AB478_RS13890 SM00382 ATPases associated with a variety of cellular activities AB478_RS13905 SM00867 YceI-like domain AB478_RS13915 SM00450 Rhodanese Homology Domain AB478_RS13970 SM00382 ATPases associated with a variety of cellular activities AB478_RS14010 SM00357 Cold shock protein domain AB478_RS14015 SM00530 Helix-turn-helix XRE-family like proteins AB478_RS14030 SM00470 ParB-like nuclease domain AB478_RS14040 SM01228 AB478_RS14040