locus-tag	class	description
C9J86_RS00065	COG1388	LysM domain
C9J86_RS00065	COG5632	N-Acetylmuramoyl-L-alanine amidase
C9J86_RS00110	COG0739	heme binding
C9J86_RS00170	COG4695	Portal protein
C9J86_RS00280	COG1484	DNA-dependent DNA replication
C9J86_RS00335	COG3645	SOS response
C9J86_RS00335	COG3646	Phage regulatory protein
C9J86_RS00390	COG0535	radical SAM domain protein
C9J86_RS00395	COG1607	acyl-coa hydrolase
C9J86_RS00400	COG2309	aminopeptidase activity
C9J86_RS00420	COG1295	ribonuclease BN
C9J86_RS00550	COG4851	CamS sex pheromone cAM373 precursor
C9J86_RS00570	COG4496	protein, YerC YecD
C9J86_RS00605	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
C9J86_RS00615	COG0077	Prephenate dehydratase
C9J86_RS00635	COG1335	isochorismatase
C9J86_RS00650	COG1012	belongs to the aldehyde dehydrogenase family
C9J86_RS00700	COG1131	(ABC) transporter
C9J86_RS00715	COG1725	Transcriptional regulator
C9J86_RS00760	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
C9J86_RS00840	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
C9J86_RS00845	COG1621	beta-fructofuranosidase activity
C9J86_RS00850	COG1609	Transcriptional regulator
C9J86_RS00855	COG0004	ammonium transporteR
C9J86_RS00860	COG0425	Belongs to the sulfur carrier protein TusA family
C9J86_RS00865	COG2391	methyltransferase activity
C9J86_RS00875	COG0488	(ABC) transporter
C9J86_RS00885	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
C9J86_RS00895	COG0456	acetyltransferase
C9J86_RS00900	COG1214	PFAM Peptidase M22, glycoprotease
C9J86_RS00905	COG0802	atpase or kinase
C9J86_RS00920	COG0028	Belongs to the TPP enzyme family
C9J86_RS01000	COG2183	response to ionizing radiation
C9J86_RS01005	COG1191	sigma factor activity
C9J86_RS01015	COG1366	Belongs to the anti-sigma-factor antagonist family
C9J86_RS01020	COG2208	phosphoserine phosphatase activity
C9J86_RS01055	COG3428	Bacterial PH domain
C9J86_RS01085	COG2205	protein histidine kinase activity
C9J86_RS01090	COG0745	RESPONSE REGULATOR receiver
C9J86_RS01100	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
C9J86_RS01110	COG0772	Belongs to the SEDS family
C9J86_RS01130	COG1937	Protein conserved in bacteria
C9J86_RS01140	COG1418	mRNA catabolic process
C9J86_RS01190	COG0629	single-stranded DNA binding
C9J86_RS01270	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
C9J86_RS01295	COG0009	L-threonylcarbamoyladenylate synthase
C9J86_RS01300	COG2890	protein-(glutamine-N5) methyltransferase activity
C9J86_RS01325	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
C9J86_RS01365	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C9J86_RS01415	COG0813	purine-nucleoside phosphorylase activity
C9J86_RS01420	COG0783	Belongs to the Dps family
C9J86_RS01440	COG1482	cell wall glycoprotein biosynthetic process
C9J86_RS01445	COG0702	epimerase
C9J86_RS01450	COG0640	Transcriptional regulator
C9J86_RS01490	COG0561	phosphatase activity
C9J86_RS01495	COG1119	ATPase activity
C9J86_RS01515	COG3711	transcriptional antiterminator
C9J86_RS01545	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
C9J86_RS01605	COG0489	protein tyrosine kinase activity
C9J86_RS01610	COG2814	Major facilitator Superfamily
C9J86_RS01625	COG1272	protein, Hemolysin III
C9J86_RS01635	COG1988	membrane-bound metal-dependent
C9J86_RS01645	COG3314	Sporulation integral membrane protein YlbJ
C9J86_RS01650	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C9J86_RS01655	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C9J86_RS01660	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
C9J86_RS01670	COG3457	Alanine racemase
C9J86_RS01675	COG4264	IucA IucC family
C9J86_RS01680	COG2814	Major facilitator Superfamily
C9J86_RS01705	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C9J86_RS01715	COG2130	NADP-dependent
C9J86_RS01785	COG0656	L-ascorbic acid biosynthetic process
C9J86_RS01790	COG0789	Transcriptional regulator
C9J86_RS01800	COG5492	domain, Protein
C9J86_RS01820	COG3527	Alpha-acetolactate decarboxylase
C9J86_RS01825	COG0028	Belongs to the TPP enzyme family
C9J86_RS01915	COG0201	protein transport
C9J86_RS02030	COG2252	PERMEase
C9J86_RS02075	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
C9J86_RS02140	COG1763	Mo-molybdopterin cofactor biosynthetic process
C9J86_RS02160	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
C9J86_RS02165	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
C9J86_RS02170	COG4149	molybdate abc transporter
C9J86_RS02175	COG0725	ABC transporter, periplasmic molybdate-binding protein
C9J86_RS02190	COG1268	BioY protein
C9J86_RS02205	COG1960	acyl-CoA dehydrogenase activity
C9J86_RS02210	COG4413	Urea transporter
C9J86_RS02285	COG1757	Na H antiporter
C9J86_RS02300	COG3942	CHAP domain
C9J86_RS02375	COG1113	amino acid transport
C9J86_RS02395	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
C9J86_RS02400	COG0385	Bile acid
C9J86_RS02410	COG1263	PTS System
C9J86_RS02410	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C9J86_RS02415	COG1737	Transcriptional regulator
C9J86_RS02435	COG1028	Short-chain dehydrogenase reductase Sdr
C9J86_RS02440	COG1473	amidohydrolase
C9J86_RS02455	COG0583	DNA-binding transcription factor activity
C9J86_RS02480	COG2258	MOSC domain
C9J86_RS02500	COG1668	transmembrane transport
C9J86_RS02505	COG4152	abc transporter atp-binding protein
C9J86_RS02525	COG0786	glutamate:sodium symporter activity
C9J86_RS02535	COG0598	Magnesium transport protein CorA
C9J86_RS02550	COG0657	acetylesterase activity
C9J86_RS02560	COG2814	Major facilitator Superfamily
C9J86_RS02565	COG1566	PFAM secretion protein HlyD family protein
C9J86_RS02580	COG2814	Major facilitator Superfamily
C9J86_RS02650	COG1131	(ABC) transporter
C9J86_RS02665	COG1620	l-lactate permease
C9J86_RS02685	COG0604	alcohol dehydrogenase
C9J86_RS02715	COG1511	domain protein
C9J86_RS02730	COG1263	PTS System
C9J86_RS02730	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C9J86_RS02745	COG3871	stress protein (general stress protein 26)
C9J86_RS02790	COG0789	Transcriptional regulator
C9J86_RS02810	COG2181	nitrate reductase activity
C9J86_RS02820	COG1140	nitrate reductase beta subunit
C9J86_RS02825	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
C9J86_RS02835	COG2146	nitrite reductase [NAD(P)H] activity
C9J86_RS02840	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
C9J86_RS02850	COG0454	-acetyltransferase
C9J86_RS02855	COG2116	formate transmembrane transporter activity
C9J86_RS02870	COG0803	Belongs to the bacterial solute-binding protein 9 family
C9J86_RS02870	COG3443	Belongs to the bacterial solute-binding protein 9 family
C9J86_RS02905	COG1126	abc transporter atp-binding protein
C9J86_RS02910	COG0765	amino acid transport
C9J86_RS02915	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
C9J86_RS02920	COG2814	Major facilitator Superfamily
C9J86_RS02940	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
C9J86_RS02990	COG0156	8-amino-7-oxononanoate synthase activity
C9J86_RS03000	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
C9J86_RS03005	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
C9J86_RS03020	COG1132	(ABC) transporter
C9J86_RS03025	COG1132	(ABC) transporter
C9J86_RS03025	COG2375	cellular response to nickel ion
C9J86_RS03045	COG1929	Belongs to the glycerate kinase type-1 family
C9J86_RS03055	COG2814	Major facilitator Superfamily
C9J86_RS03075	COG1113	amino acid transport
C9J86_RS03090	COG0531	amino acid
C9J86_RS03110	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
C9J86_RS03120	COG1174	glycine betaine transport
C9J86_RS03130	COG1174	glycine betaine transport
C9J86_RS03150	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
C9J86_RS03155	COG0531	amino acid
C9J86_RS03160	COG2272	Belongs to the type-B carboxylesterase lipase family
C9J86_RS03165	COG2814	Major facilitator Superfamily
C9J86_RS03170	COG0390	transport system, permease component
C9J86_RS03175	COG4619	ABC transporter
C9J86_RS03180	COG1363	Peptidase, m42
C9J86_RS03200	COG4808	Protein conserved in bacteria
C9J86_RS03205	COG0069	glutamate synthase activity
C9J86_RS03220	COG1124	(ABC) transporter
C9J86_RS03230	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C9J86_RS03235	COG0601	transmembrane transport
C9J86_RS03240	COG0747	negative chemotaxis
C9J86_RS03260	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
C9J86_RS03265	COG1028	Short-chain dehydrogenase reductase Sdr
C9J86_RS03270	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
C9J86_RS03275	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
C9J86_RS03355	COG0494	nUDIX hydrolase
C9J86_RS03405	COG1070	Carbohydrate kinase
C9J86_RS03410	COG1802	Transcriptional regulator
C9J86_RS03415	COG0789	Transcriptional regulator
C9J86_RS03420	COG2357	RelA SpoT domain protein
C9J86_RS03425	COG4876	unkown
C9J86_RS03435	COG2271	Major facilitator Superfamily
C9J86_RS03440	COG0586	Pfam SNARE associated Golgi protein
C9J86_RS03445	COG1279	arginine transmembrane transporter activity
C9J86_RS03465	COG1131	(ABC) transporter
C9J86_RS03485	COG0400	carboxylic ester hydrolase activity
C9J86_RS03490	COG0346	lactoylglutathione lyase activity
C9J86_RS03495	COG1846	Transcriptional regulator
C9J86_RS03505	COG2514	catechol 2,3-dioxygenase activity
C9J86_RS03525	COG0561	phosphatase activity
C9J86_RS03530	COG3764	Sortase (surface protein transpeptidase)
C9J86_RS03550	COG1760	l-serine dehydratase
C9J86_RS03555	COG1760	l-serine dehydratase
C9J86_RS03570	COG0697	spore germination
C9J86_RS03575	COG0657	acetylesterase activity
C9J86_RS03595	COG0028	Belongs to the TPP enzyme family
C9J86_RS03610	COG0583	DNA-binding transcription factor activity
C9J86_RS03620	COG3942	CHAP domain
C9J86_RS03630	COG3425	synthase
C9J86_RS03635	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
C9J86_RS03660	COG2409	Drug exporters of the RND superfamily
C9J86_RS03685	COG3682	Transcriptional regulator
C9J86_RS03745	COG0436	Aminotransferase
C9J86_RS03880	COG3001	Fructosamine kinase
C9J86_RS03885	COG0167	dihydroorotate dehydrogenase activity
C9J86_RS03935	COG3527	Alpha-acetolactate decarboxylase
C9J86_RS03950	COG0531	amino acid
C9J86_RS03980	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
C9J86_RS04000	COG1012	belongs to the aldehyde dehydrogenase family
C9J86_RS04010	COG1510	regulation of RNA biosynthetic process
C9J86_RS04015	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C9J86_RS04040	COG2851	Citrate transporter
C9J86_RS04055	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
C9J86_RS04065	COG0386	Belongs to the glutathione peroxidase family
C9J86_RS04090	COG1136	(ABC) transporter
C9J86_RS04095	COG2205	protein histidine kinase activity
C9J86_RS04100	COG0745	RESPONSE REGULATOR receiver
C9J86_RS04110	COG1785	Belongs to the alkaline phosphatase family
C9J86_RS04120	COG1846	Transcriptional regulator
C9J86_RS04165	COG1438	arginine binding
C9J86_RS04185	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
C9J86_RS04185	COG3711	transcriptional antiterminator
C9J86_RS04190	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C9J86_RS04190	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C9J86_RS04190	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
C9J86_RS04195	COG1482	cell wall glycoprotein biosynthetic process
C9J86_RS04205	COG3942	CHAP domain
C9J86_RS04205	COG1705	Flagellar rod assembly protein muramidase FlgJ
C9J86_RS04210	COG1535	isochorismatase
C9J86_RS04210	COG3433	isochorismatase activity
C9J86_RS04225	COG0438	transferase activity, transferring glycosyl groups
C9J86_RS04240	COG1073	alpha beta
C9J86_RS04260	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C9J86_RS04285	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
C9J86_RS04375	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
C9J86_RS04455	COG0471	metal ion transport
C9J86_RS04460	COG2962	Rard protein
C9J86_RS04470	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
C9J86_RS04485	COG1136	(ABC) transporter
C9J86_RS04490	COG0577	efflux transmembrane transporter activity
C9J86_RS04515	COG1404	Belongs to the peptidase S8 family
C9J86_RS04520	COG1278	Cold shock
C9J86_RS04540	COG1475	DNA binding
C9J86_RS04580	COG2501	S4 domain
C9J86_RS04600	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
C9J86_RS04630	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
C9J86_RS04640	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
C9J86_RS04650	COG0305	Participates in initiation and elongation during chromosome replication
C9J86_RS04685	COG4863	YycH protein
C9J86_RS04695	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
C9J86_RS04700	COG0737	Belongs to the 5'-nucleotidase family
C9J86_RS04725	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C9J86_RS04725	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C9J86_RS04765	COG3425	synthase
C9J86_RS04775	COG0584	glycerophosphoryl diester phosphodiesterase
C9J86_RS04780	COG2030	dehydratase
C9J86_RS04860	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
C9J86_RS04885	COG0640	Transcriptional regulator
C9J86_RS04895	COG2217	Heavy metal translocating P-type atpase
C9J86_RS04900	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C9J86_RS04905	COG2210	Belongs to the sulfur carrier protein TusA family
C9J86_RS04910	COG1937	Protein conserved in bacteria
C9J86_RS04915	COG0730	response to heat
C9J86_RS04925	COG1388	LysM domain
C9J86_RS04945	COG1388	LysM domain
C9J86_RS04960	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
C9J86_RS04965	COG2217	Heavy metal translocating P-type atpase
C9J86_RS05000	COG2217	Heavy metal translocating P-type atpase
C9J86_RS05025	COG3655	Transcriptional regulator
C9J86_RS05030	COG2311	Membrane
C9J86_RS05050	COG1401	restriction endodeoxyribonuclease activity
C9J86_RS05055	COG4268	DNA restriction-modification system
C9J86_RS05080	COG2814	Major facilitator Superfamily
C9J86_RS05105	COG0456	acetyltransferase
C9J86_RS05140	COG0823	Involved in the tonB-independent uptake of proteins
C9J86_RS05155	COG1473	amidohydrolase
C9J86_RS05165	COG1283	sodium-dependent phosphate transmembrane transporter activity
C9J86_RS05170	COG4716	Myosin-crossreactive antigen
C9J86_RS05180	COG1620	l-lactate permease
C9J86_RS05200	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C9J86_RS05205	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C9J86_RS05210	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
C9J86_RS05220	COG2423	ornithine cyclodeaminase activity
C9J86_RS05225	COG4264	IucA IucC family
C9J86_RS05230	COG2814	Major facilitator Superfamily
C9J86_RS05235	COG4264	IucA IucC family
C9J86_RS05240	COG4264	IucA IucC family
C9J86_RS05250	COG0019	diaminopimelate decarboxylase activity
C9J86_RS05255	COG1475	DNA binding
C9J86_RS05280	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C9J86_RS05285	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
C9J86_RS05290	COG0438	transferase activity, transferring glycosyl groups
C9J86_RS05325	COG0813	purine-nucleoside phosphorylase activity
C9J86_RS05330	COG2814	Major facilitator Superfamily
C9J86_RS05350	COG3639	organic phosphonate transmembrane transporter activity
C9J86_RS05370	COG0737	Belongs to the 5'-nucleotidase family
C9J86_RS05385	COG1454	alcohol dehydrogenase
C9J86_RS05385	COG1012	belongs to the aldehyde dehydrogenase family
C9J86_RS05410	COG1086	Polysaccharide biosynthesis protein
C9J86_RS05420	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
C9J86_RS05450	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
C9J86_RS05460	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
C9J86_RS05465	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
C9J86_RS05475	COG2832	Protein of unknown function (DUF454)
C9J86_RS05510	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
C9J86_RS05515	COG1960	acyl-CoA dehydrogenase activity
C9J86_RS05520	COG5609	conserved protein (DUF2294)
C9J86_RS05570	COG1114	Component of the transport system for branched-chain amino acids
C9J86_RS05575	COG1335	isochorismatase
C9J86_RS05580	COG3961	Belongs to the TPP enzyme family
C9J86_RS05610	COG1737	Transcriptional regulator
C9J86_RS05635	COG0601	transmembrane transport
C9J86_RS05640	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C9J86_RS05665	COG3842	ATPase activity
C9J86_RS05675	COG1175	transmembrane transport
C9J86_RS05680	COG3833	ABC-type maltose transport systems, permease component
C9J86_RS05685	COG0673	inositol 2-dehydrogenase activity
C9J86_RS05690	COG0673	inositol 2-dehydrogenase activity
C9J86_RS05700	COG1755	Isoprenylcysteine carboxyl methyltransferase
C9J86_RS05755	COG0183	Belongs to the thiolase family
C9J86_RS05765	COG1960	acyl-CoA dehydrogenase activity
C9J86_RS05770	COG0318	PFAM AMP-dependent synthetase and ligase
C9J86_RS05790	COG0747	negative chemotaxis
C9J86_RS05795	COG3189	MarR family transcriptional regulator
C9J86_RS05830	COG2190	(PTS) system
C9J86_RS05830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C9J86_RS05830	COG1263	PTS System
C9J86_RS05835	COG1957	nucleoside hydrolase
C9J86_RS05855	COG3414	Phosphotransferase system galactitol-specific IIB component
C9J86_RS05860	COG3775	system Galactitol-specific IIC component
C9J86_RS05865	COG1063	alcohol dehydrogenase
C9J86_RS05875	COG1063	alcohol dehydrogenase
C9J86_RS05885	COG1063	alcohol dehydrogenase
C9J86_RS05890	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
C9J86_RS05900	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
C9J86_RS05910	COG1063	alcohol dehydrogenase
C9J86_RS05915	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
C9J86_RS05955	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C9J86_RS05965	COG1263	PTS System
C9J86_RS05965	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C9J86_RS05965	COG2190	(PTS) system
C9J86_RS05970	COG2723	6-phospho-beta-galactosidase activity
C9J86_RS05980	COG2226	methyltransferase
C9J86_RS06030	COG1131	(ABC) transporter
C9J86_RS06050	COG1388	LysM domain
C9J86_RS06050	COG3942	CHAP domain
C9J86_RS06190	COG1114	Component of the transport system for branched-chain amino acids
C9J86_RS06200	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
C9J86_RS06215	COG0577	efflux transmembrane transporter activity
C9J86_RS06245	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
C9J86_RS06250	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
C9J86_RS06275	COG3314	Sporulation integral membrane protein YlbJ
C9J86_RS06285	COG0582	viral genome integration into host DNA
C9J86_RS06305	COG2176	DNA-directed DNA polymerase activity
C9J86_RS06425	COG0756	dUTP diphosphatase activity
C9J86_RS06560	COG3953	SLT domain
C9J86_RS06560	COG5280	Phage tail tape measure protein TP901
C9J86_RS06610	COG5632	N-Acetylmuramoyl-L-alanine amidase
C9J86_RS06610	COG1388	LysM domain
C9J86_RS06640	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C9J86_RS06670	COG3037	sugar-specific permease SgaT UlaA
C9J86_RS06680	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
C9J86_RS06685	COG3711	transcriptional antiterminator
C9J86_RS06710	COG2271	Major facilitator Superfamily
C9J86_RS06715	COG0346	lactoylglutathione lyase activity
C9J86_RS06720	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C9J86_RS06740	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
C9J86_RS06745	COG2822	iron ion transport
C9J86_RS06755	COG0672	)-iron permease
C9J86_RS06760	COG0805	protein transport
C9J86_RS06765	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
C9J86_RS06775	COG1476	TRANSCRIPTIONal
C9J86_RS06785	COG1131	(ABC) transporter
C9J86_RS06815	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
C9J86_RS06815	COG0646	methionine synthase
C9J86_RS06820	COG0626	cystathionine gamma-synthase activity
C9J86_RS06825	COG0626	cystathionine gamma-synthase activity
C9J86_RS06835	COG1475	DNA binding
C9J86_RS06840	COG0668	transmembrane transport
C9J86_RS06845	COG4481	Protein conserved in bacteria
C9J86_RS06850	COG0012	GTP binding
C9J86_RS06950	COG1823	symporter activity
C9J86_RS06985	COG2233	PERMEase
C9J86_RS07035	COG3759	membrane
C9J86_RS07175	COG0523	cobalamin synthesis protein
C9J86_RS07200	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
C9J86_RS07210	COG5609	conserved protein (DUF2294)
C9J86_RS07225	COG1647	Serine aminopeptidase, S33
C9J86_RS07235	COG0733	neurotransmitter:sodium symporter activity
C9J86_RS07240	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
C9J86_RS07245	COG0626	cystathionine gamma-synthase activity
C9J86_RS07255	COG2011	ABC-type metal ion transport system permease component
C9J86_RS07260	COG1464	Belongs to the NlpA lipoprotein family
C9J86_RS07295	COG0583	DNA-binding transcription factor activity
C9J86_RS07300	COG0070	glutamate synthase
C9J86_RS07300	COG0069	glutamate synthase activity
C9J86_RS07300	COG0067	glutamate synthase
C9J86_RS07305	COG0493	'glutamate synthase
C9J86_RS07315	COG1263	PTS System
C9J86_RS07315	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C9J86_RS07320	COG0366	Alpha amylase catalytic
C9J86_RS07325	COG2188	Transcriptional regulator
C9J86_RS07345	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
C9J86_RS07380	COG1982	Orn Lys Arg decarboxylase major
C9J86_RS07390	COG3870	Protein conserved in bacteria
C9J86_RS07395	COG0470	DNA polymerase III
C9J86_RS07400	COG1774	PSP1 C-terminal conserved region
C9J86_RS07410	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
C9J86_RS07420	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
C9J86_RS07430	COG0084	hydrolase, TatD family'
C9J86_RS07435	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
C9J86_RS07445	COG4466	Protein conserved in bacteria
C9J86_RS07455	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
C9J86_RS07460	COG0251	oxidation-reduction process
C9J86_RS07505	COG2244	polysaccharide biosynthetic process
C9J86_RS07510	COG3956	TIGRFAM MazG family protein
C9J86_RS07515	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
C9J86_RS07525	COG1098	S1 RNA binding domain
C9J86_RS07540	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
C9J86_RS07565	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
C9J86_RS07665	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
C9J86_RS07685	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
C9J86_RS07695	COG3880	PFAM UvrB UvrC protein
C9J86_RS07710	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
C9J86_RS07715	COG4956	integral membrane protein (PIN domain superfamily)
C9J86_RS07740	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
C9J86_RS07800	COG2813	Specifically methylates the guanine in position
C9J86_RS07840	COG1473	amidohydrolase
C9J86_RS07870	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
C9J86_RS07875	COG1428	Deoxynucleoside kinase
C9J86_RS07880	COG1428	Deoxynucleoside kinase
C9J86_RS07890	COG0561	phosphatase activity
C9J86_RS07935	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
C9J86_RS08050	COG0095	Lipoate-protein ligase
C9J86_RS08055	COG0083	homoserine kinase activity
C9J86_RS08075	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C9J86_RS08115	COG0667	Aldo Keto reductase
C9J86_RS08120	COG0655	NAD(P)H dehydrogenase (quinone) activity
C9J86_RS08130	COG1078	dGTPase activity
C9J86_RS08165	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
C9J86_RS08170	COG4139	cobalamin transport
C9J86_RS08265	COG2814	Major facilitator Superfamily
C9J86_RS08275	COG0803	Belongs to the bacterial solute-binding protein 9 family
C9J86_RS08280	COG1108	ABC-type Mn2 Zn2 transport systems permease components
C9J86_RS08285	COG1121	(ABC) transporter
C9J86_RS08290	COG1321	iron dependent repressor
C9J86_RS08310	COG1682	transport, permease protein
C9J86_RS08315	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
C9J86_RS08325	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
C9J86_RS08330	COG1686	Belongs to the peptidase S11 family
C9J86_RS08335	COG1132	(ABC) transporter
C9J86_RS08340	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
C9J86_RS08350	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
C9J86_RS08355	COG1120	ATPase activity
C9J86_RS08360	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C9J86_RS08365	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C9J86_RS08370	COG2376	Dihydroxyacetone kinase
C9J86_RS08390	COG3949	Membrane
C9J86_RS08415	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
C9J86_RS08430	COG1136	(ABC) transporter
C9J86_RS08435	COG0577	efflux transmembrane transporter activity
C9J86_RS08440	COG1392	Phosphate transport regulator
C9J86_RS08445	COG0306	phosphate transporter
C9J86_RS08450	COG1388	LysM domain
C9J86_RS08450	COG3942	CHAP domain
C9J86_RS08460	COG1917	Cupin 2, conserved barrel domain protein
C9J86_RS08460	COG4977	sequence-specific DNA binding
C9J86_RS08490	COG0583	DNA-binding transcription factor activity
C9J86_RS08495	COG2814	Major facilitator Superfamily
C9J86_RS08500	COG2839	Protein conserved in bacteria
C9J86_RS08535	COG1611	Belongs to the LOG family
C9J86_RS08555	COG4988	ABC transporter
C9J86_RS08560	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
C9J86_RS08570	COG0523	cobalamin synthesis protein
C9J86_RS08575	COG4989	oxidoreductase activity
C9J86_RS08585	COG0471	metal ion transport
C9J86_RS08590	COG0415	Belongs to the DNA photolyase family
C9J86_RS08620	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
C9J86_RS08625	COG1349	DNA-binding transcription factor activity
C9J86_RS08630	COG1105	Belongs to the carbohydrate kinase PfkB family
C9J86_RS08635	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
C9J86_RS08635	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C9J86_RS08635	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
C9J86_RS08640	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
C9J86_RS08645	COG1253	flavin adenine dinucleotide binding
C9J86_RS08650	COG0656	L-ascorbic acid biosynthetic process
C9J86_RS08655	COG0463	Glycosyl transferase, family 2
C9J86_RS08695	COG0720	synthase
C9J86_RS08705	COG0512	Glutamine amidotransferase of anthranilate synthase
C9J86_RS08705	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
C9J86_RS08710	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
C9J86_RS08745	COG0488	(ABC) transporter
C9J86_RS08750	COG0514	ATP-dependent DNA helicase (RecQ)
C9J86_RS08755	COG1125	glycine betaine transport
C9J86_RS08755	COG0517	IMP dehydrogenase activity
C9J86_RS08760	COG1174	glycine betaine transport
C9J86_RS08785	COG3104	oligopeptide transport
C9J86_RS08815	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C9J86_RS08820	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
C9J86_RS08825	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
C9J86_RS08830	COG4605	iron ion homeostasis
C9J86_RS08835	COG4604	ABC transporter, ATP-binding protein
C9J86_RS08840	COG4607	ABC-type enterochelin transport system periplasmic component
C9J86_RS08895	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
C9J86_RS08900	COG1739	Uncharacterized protein family UPF0029
C9J86_RS08910	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
C9J86_RS08915	COG1040	competence protein
C9J86_RS08945	COG1388	LysM domain
C9J86_RS08945	COG3942	CHAP domain
C9J86_RS09005	COG0391	Required for morphogenesis under gluconeogenic growth conditions
C9J86_RS09025	COG0281	malic enzyme
C9J86_RS09075	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
C9J86_RS09080	COG1647	Serine aminopeptidase, S33
C9J86_RS09085	COG0557	exoribonuclease II activity
C9J86_RS09150	COG1278	Cold shock
C9J86_RS09190	COG0406	alpha-ribazole phosphatase activity
C9J86_RS09195	COG1279	arginine transmembrane transporter activity
C9J86_RS09220	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
C9J86_RS09225	COG1393	Belongs to the ArsC family
C9J86_RS09240	COG3878	Protein conserved in bacteria
C9J86_RS09245	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
C9J86_RS09260	COG2011	ABC-type metal ion transport system permease component
C9J86_RS09265	COG1464	Belongs to the NlpA lipoprotein family
C9J86_RS09290	COG0396	ATPase activity
C9J86_RS09295	COG0719	Fe-S assembly protein
C9J86_RS09305	COG0822	iron-sulfur transferase activity
C9J86_RS09325	COG1253	flavin adenine dinucleotide binding
C9J86_RS09335	COG1801	Protein of unknown function DUF72
C9J86_RS09340	COG0730	response to heat
C9J86_RS09355	COG4470	Protein conserved in bacteria
C9J86_RS09365	COG2445	Protein of unknown function DUF86
C9J86_RS09395	COG1696	Membrane protein involved in D-alanine export
C9J86_RS09405	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
C9J86_RS09410	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
C9J86_RS09415	COG4837	Protein of unknown function (DUF1462)
C9J86_RS09420	COG1252	NADH dehydrogenase
C9J86_RS09430	COG0316	Belongs to the HesB IscA family
C9J86_RS09440	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
C9J86_RS09445	COG2056	Na+-H+ antiporter family
C9J86_RS09450	COG2050	protein possibly involved in aromatic compounds catabolism
C9J86_RS09505	COG1098	S1 RNA binding domain
C9J86_RS09510	COG1902	pentaerythritol trinitrate reductase activity
C9J86_RS09515	COG2826	transposase and inactivated derivatives, IS30 family
C9J86_RS09535	COG0584	glycerophosphoryl diester phosphodiesterase
C9J86_RS09555	COG0398	Pfam SNARE associated Golgi protein
C9J86_RS09600	COG0561	phosphatase activity
C9J86_RS09625	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
C9J86_RS09640	COG1881	PFAM PEBP family protein
C9J86_RS09670	COG0601	transmembrane transport
C9J86_RS09675	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C9J86_RS09680	COG0444	Belongs to the ABC transporter superfamily
C9J86_RS09685	COG4608	Belongs to the ABC transporter superfamily
C9J86_RS09690	COG4166	transmembrane transport
C9J86_RS09705	COG0747	negative chemotaxis
C9J86_RS09710	COG0444	Belongs to the ABC transporter superfamily
C9J86_RS09720	COG0601	transmembrane transport
C9J86_RS09725	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
C9J86_RS09760	COG1164	Oligoendopeptidase f
C9J86_RS09770	COG2346	COG2346, Truncated hemoglobins
C9J86_RS09785	COG2357	RelA SpoT domain protein
C9J86_RS09795	COG0564	pseudouridine synthase activity
C9J86_RS09800	COG2239	Acts as a magnesium transporter
C9J86_RS09805	COG0475	glutathione-regulated potassium exporter activity
C9J86_RS09805	COG0569	domain protein
C9J86_RS09815	COG0628	permease
C9J86_RS09820	COG1115	amino acid carrier protein
C9J86_RS09870	COG0861	Integral membrane protein TerC family
C9J86_RS09880	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
C9J86_RS09885	COG0737	Belongs to the 5'-nucleotidase family
C9J86_RS09900	COG4903	ComK protein
C9J86_RS09915	COG4873	Protein conserved in bacteria
C9J86_RS09975	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
C9J86_RS09985	COG2314	TM2 domain
C9J86_RS09990	COG0456	acetyltransferase
C9J86_RS09995	COG1575	Belongs to the MenA family. Type 1 subfamily
C9J86_RS10005	COG1169	isochorismate synthase
C9J86_RS10015	COG2267	carboxylic ester hydrolase activity
C9J86_RS10045	COG0436	Aminotransferase
C9J86_RS10050	COG3594	Acyltransferase
C9J86_RS10080	COG1316	TRANSCRIPTIONal
C9J86_RS10130	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
C9J86_RS10145	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
C9J86_RS10190	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
C9J86_RS10195	COG4172	Belongs to the ABC transporter superfamily
C9J86_RS10200	COG4721	ABC-type cobalt transport system, permease component
C9J86_RS10220	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
C9J86_RS10245	COG1271	oxidase subunit
C9J86_RS10250	COG1294	oxidase, subunit
C9J86_RS10255	COG0569	domain protein
C9J86_RS10325	COG1176	ABC-type spermidine putrescine transport system, permease component I
C9J86_RS10330	COG1177	transmembrane transport
C9J86_RS10335	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
C9J86_RS10360	COG0483	inositol monophosphate 1-phosphatase activity
C9J86_RS10370	COG1217	gtp-binding protein TYPA
C9J86_RS10380	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
C9J86_RS10390	COG0772	Belongs to the SEDS family
C9J86_RS10420	COG2340	Cysteine-rich secretory protein family
C9J86_RS10425	COG3679	Belongs to the UPF0342 family
C9J86_RS10430	COG0584	glycerophosphoryl diester phosphodiesterase
C9J86_RS10445	COG0742	ribosomal rna small subunit methyltransferase
C9J86_RS10505	COG4509	Sortase family
C9J86_RS10520	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
C9J86_RS10555	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
C9J86_RS10555	COG1796	DNA polymerase
C9J86_RS10580	COG2009	succinate dehydrogenase
C9J86_RS10585	COG1053	succinate dehydrogenase
C9J86_RS10590	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
C9J86_RS10710	COG1288	antiporter activity
C9J86_RS10740	COG1011	Hydrolase
C9J86_RS10765	COG4839	cell division protein FtsL
C9J86_RS10770	COG0768	penicillin binding
C9J86_RS10805	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
C9J86_RS10815	COG0762	integral membrane protein
C9J86_RS10820	COG2302	S4 RNA-binding domain
C9J86_RS10825	COG3599	regulation of cell shape
C9J86_RS10835	COG2826	transposase and inactivated derivatives, IS30 family
C9J86_RS10840	COG2514	catechol 2,3-dioxygenase activity
C9J86_RS10850	COG0564	pseudouridine synthase activity
C9J86_RS10860	COG2233	PERMEase
C9J86_RS10905	COG1293	RNA-binding protein homologous to eukaryotic snRNP
C9J86_RS10920	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
C9J86_RS10925	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
C9J86_RS10940	COG2314	TM2 domain
C9J86_RS10955	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
C9J86_RS10955	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
C9J86_RS10965	COG0631	protein serine/threonine phosphatase activity
C9J86_RS10980	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
C9J86_RS10995	COG1302	Protein conserved in bacteria
C9J86_RS11045	COG1196	nuclear chromosome segregation
C9J86_RS11050	COG0552	protein localization to endoplasmic reticulum
C9J86_RS11060	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
C9J86_RS11115	COG2348	transferase activity, transferring amino-acyl groups
C9J86_RS11120	COG0758	DNA mediated transformation
C9J86_RS11220	COG0195	Participates in both transcription termination and antitermination
C9J86_RS11225	COG2740	Nucleic-acid-binding protein implicated in transcription termination
C9J86_RS11250	COG0196	riboflavin kinase activity
C9J86_RS11280	COG2188	Transcriptional regulator
C9J86_RS11285	COG0612	Peptidase, M16
C9J86_RS11290	COG0612	Peptidase, M16
C9J86_RS11295	COG0300	oxidoreductase activity
C9J86_RS11315	COG1058	Belongs to the CinA family
C9J86_RS11315	COG1546	Belongs to the CinA family
C9J86_RS11335	COG1692	metallophosphoesterase
C9J86_RS11340	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
C9J86_RS11340	COG0674	pyruvate-flavodoxin oxidoreductase activity
C9J86_RS11345	COG1013	pyruvate-flavodoxin oxidoreductase activity
C9J86_RS11380	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
C9J86_RS11385	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
C9J86_RS11410	COG1923	regulation of RNA biosynthetic process
C9J86_RS11420	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
C9J86_RS11425	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
C9J86_RS11430	COG0789	Transcriptional regulator
C9J86_RS11465	COG2826	transposase and inactivated derivatives, IS30 family
C9J86_RS11575	COG1131	(ABC) transporter
C9J86_RS11590	COG2197	response regulator
C9J86_RS11605	COG1525	nuclease
C9J86_RS11620	COG0527	aspartate kinase activity
C9J86_RS11625	COG0460	homoserine dehydrogenase
C9J86_RS11630	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
C9J86_RS11655	COG0833	amino acid
C9J86_RS11720	COG4846	Membrane protein involved in cytochrome C biogenesis
C9J86_RS11740	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
C9J86_RS11750	COG0824	Thioesterase
C9J86_RS11790	COG1115	amino acid carrier protein
C9J86_RS11805	COG0628	permease
C9J86_RS11835	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
C9J86_RS11845	COG1363	Peptidase, m42
C9J86_RS11850	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
C9J86_RS11855	COG0512	Glutamine amidotransferase of anthranilate synthase
C9J86_RS11940	COG0704	Plays a role in the regulation of phosphate uptake
C9J86_RS11950	COG0581	inorganic phosphate transmembrane transporter activity
C9J86_RS11955	COG0573	inorganic phosphate transmembrane transporter activity
C9J86_RS11970	COG0488	(ABC) transporter
C9J86_RS11975	COG0527	aspartate kinase activity
C9J86_RS11980	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
C9J86_RS12055	COG4548	von Willebrand factor, type A
C9J86_RS12060	COG0714	Associated with various cellular activities
C9J86_RS12105	COG0671	phosphoesterase, PA-phosphatase related
C9J86_RS12125	COG2826	transposase and inactivated derivatives, IS30 family
C9J86_RS12185	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
C9J86_RS12205	COG0531	amino acid
C9J86_RS12220	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C9J86_RS12225	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
C9J86_RS12245	COG0116	Belongs to the methyltransferase superfamily
C9J86_RS12280	COG4499	WXG100 protein secretion system (Wss), protein YukC
C9J86_RS12280	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
C9J86_RS12290	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
C9J86_RS12295	COG3935	DnaD domain protein
C9J86_RS12320	COG0438	transferase activity, transferring glycosyl groups
C9J86_RS12325	COG1694	Mazg nucleotide pyrophosphohydrolase
C9J86_RS12330	COG2738	Putative neutral zinc metallopeptidase
C9J86_RS12335	COG4347	Protein of unknown function (DUF1405)
C9J86_RS12370	COG0142	geranyltranstransferase activity
C9J86_RS12435	COG0492	ferredoxin-NADP+ reductase activity
C9J86_RS12450	COG0514	ATP-dependent DNA helicase (RecQ)
C9J86_RS12460	COG1141	Ferredoxin
C9J86_RS12510	COG0745	RESPONSE REGULATOR receiver
C9J86_RS12515	COG1187	pseudouridine synthase activity
C9J86_RS12540	COG0735	belongs to the Fur family
C9J86_RS12545	COG0494	nUDIX hydrolase
C9J86_RS12550	COG0667	Aldo Keto reductase
C9J86_RS12560	COG4221	oxidoreductase activity
C9J86_RS12575	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
C9J86_RS12585	COG0366	Alpha amylase catalytic
C9J86_RS12590	COG1609	Transcriptional regulator
C9J86_RS12620	COG2195	Cleaves the N-terminal amino acid of tripeptides
C9J86_RS12630	COG4129	membrane
C9J86_RS12640	COG0508	dehydrogenase complex catalyzes the overall conversion of
C9J86_RS12645	COG0022	dehydrogenase e1 component
C9J86_RS12650	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
C9J86_RS12655	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
C9J86_RS12660	COG0497	DNA recombination
C9J86_RS12690	COG1302	Protein conserved in bacteria
C9J86_RS12695	COG0439	Biotin carboxylase
C9J86_RS12700	COG0511	ligase activity, forming carbon-carbon bonds
C9J86_RS12710	COG0006	proline dipeptidase activity
C9J86_RS12725	COG0095	Lipoate-protein ligase
C9J86_RS12730	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
C9J86_RS12775	COG4537	Required for transformation and DNA binding
C9J86_RS12780	COG1459	type II secretion system
C9J86_RS12785	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
C9J86_RS12790	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C9J86_RS12795	COG0011	TIGRFAM Protein of
C9J86_RS12800	COG1940	carbohydrate kinase activity
C9J86_RS12805	COG4483	Protein conserved in bacteria
C9J86_RS12815	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
C9J86_RS12825	COG0768	penicillin binding
C9J86_RS12840	COG1108	ABC-type Mn2 Zn2 transport systems permease components
C9J86_RS12845	COG1121	(ABC) transporter
C9J86_RS12855	COG0513	Belongs to the DEAD box helicase family
C9J86_RS12865	COG2384	SAM-dependent methyltransferase
C9J86_RS12885	COG0517	IMP dehydrogenase activity
C9J86_RS12905	COG0295	cytidine deaminase activity
C9J86_RS12920	COG1702	phosphate starvation-inducible protein PhoH
C9J86_RS12935	COG1030	water channel activity
C9J86_RS12945	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
C9J86_RS12950	COG1385	rRNA (uridine-N3-)-methyltransferase activity
C9J86_RS12980	COG0635	Involved in the biosynthesis of porphyrin-containing compound
C9J86_RS13000	COG1466	dna polymerase III delta subunit
C9J86_RS13005	COG0658	competence protein
C9J86_RS13005	COG2333	competence protein COMEC
C9J86_RS13010	COG2131	deaminase
C9J86_RS13020	COG2226	methyltransferase
C9J86_RS13025	COG0799	negative regulation of ribosome biogenesis
C9J86_RS13030	COG1713	HD superfamily hydrolase involved in NAD metabolism
C9J86_RS13040	COG1534	Rna-binding protein
C9J86_RS13050	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
C9J86_RS13055	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
C9J86_RS13080	COG3177	Filamentation induced by cAMP protein fic
C9J86_RS13085	COG1914	H( )-stimulated, divalent metal cation uptake system
C9J86_RS13095	COG0439	Biotin carboxylase
C9J86_RS13100	COG0511	ligase activity, forming carbon-carbon bonds
C9J86_RS13105	COG1984	allophanate hydrolase subunit 2
C9J86_RS13110	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
C9J86_RS13125	COG0826	peptidase U32
C9J86_RS13130	COG0826	peptidase U32
C9J86_RS13160	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
C9J86_RS13175	COG1104	cysteine desulfurase activity
C9J86_RS13180	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
C9J86_RS13190	COG3237	CsbD-like
C9J86_RS13195	COG1959	2 iron, 2 sulfur cluster binding
C9J86_RS13200	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
C9J86_RS13205	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
C9J86_RS13250	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
C9J86_RS13250	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
C9J86_RS13255	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
C9J86_RS13255	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
C9J86_RS13260	COG1862	Preprotein translocase
C9J86_RS13300	COG2868	ribosomal protein
C9J86_RS13345	COG0488	(ABC) transporter
C9J86_RS13370	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
C9J86_RS13380	COG0285	dihydrofolate synthase activity
C9J86_RS13390	COG2818	Glycosylase
C9J86_RS13430	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
C9J86_RS13465	COG4112	unkown
C9J86_RS13490	COG0833	amino acid
C9J86_RS13505	COG1484	DNA-dependent DNA replication
C9J86_RS13535	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C9J86_RS13535	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
C9J86_RS13545	COG5002	protein histidine kinase activity
C9J86_RS13550	COG0745	RESPONSE REGULATOR receiver
C9J86_RS13565	COG0372	Belongs to the citrate synthase family
C9J86_RS13570	COG1113	amino acid transport
C9J86_RS13595	COG0281	malic enzyme
C9J86_RS13605	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
C9J86_RS13610	COG4109	DRTGG domain
C9J86_RS13650	COG0827	DNA restriction-modification system
C9J86_RS13660	COG0730	response to heat
C9J86_RS13670	COG1104	cysteine desulfurase activity
C9J86_RS13685	COG1956	GAF domain-containing protein
C9J86_RS13705	COG0584	glycerophosphoryl diester phosphodiesterase
C9J86_RS13710	COG1764	response to oxidative stress
C9J86_RS13715	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
C9J86_RS13720	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
C9J86_RS13735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
C9J86_RS13735	COG1263	PTS System
C9J86_RS13740	COG0204	Acyl-transferase
C9J86_RS13745	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
C9J86_RS13780	COG0454	-acetyltransferase
C9J86_RS13800	COG1605	Chorismate mutase
C9J86_RS13800	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
C9J86_RS13825	COG1674	ftsk spoiiie
C9J86_RS13830	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
C9J86_RS13840	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
C9J86_RS13845	COG1363	Peptidase, m42
C9J86_RS13855	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
C9J86_RS13865	COG0510	thiamine kinase activity
C9J86_RS13885	COG1187	pseudouridine synthase activity
C9J86_RS13890	COG2244	polysaccharide biosynthetic process
C9J86_RS13895	COG2081	HI0933 family
C9J86_RS13915	COG2814	Major facilitator Superfamily
C9J86_RS13920	COG1242	4 iron, 4 sulfur cluster binding
C9J86_RS13925	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
C9J86_RS13935	COG2267	carboxylic ester hydrolase activity
C9J86_RS13970	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C9J86_RS13970	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
C9J86_RS13990	COG5632	N-Acetylmuramoyl-L-alanine amidase
C9J86_RS13990	COG4193	domain, Protein
C9J86_RS13990	COG3266	domain, Protein
C9J86_RS14025	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
C9J86_RS14045	COG0656	L-ascorbic acid biosynthetic process
C9J86_RS14065	COG1506	peptidase
C9J86_RS14070	COG2816	NAD+ diphosphatase activity
C9J86_RS14170	COG5492	domain, Protein
C9J86_RS14325	COG5632	N-Acetylmuramoyl-L-alanine amidase
C9J86_RS14325	COG1388	LysM domain
C9J86_RS14480	COG0756	dUTP diphosphatase activity
C9J86_RS14550	COG0305	Participates in initiation and elongation during chromosome replication
C9J86_RS14615	COG3620	sequence-specific DNA binding
C9J86_RS14695	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
C9J86_RS14725	COG1131	(ABC) transporter
C9J86_RS14730	COG0537	adenosine 5'-monophosphoramidase activity
C9J86_RS14760	COG0420	3'-5' exonuclease activity
C9J86_RS14785	COG2197	response regulator
C9J86_RS14790	COG2203	Gaf domain
C9J86_RS14790	COG4585	Histidine kinase
C9J86_RS14795	COG0564	pseudouridine synthase activity
C9J86_RS14825	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
C9J86_RS14830	COG1126	abc transporter atp-binding protein
C9J86_RS14835	COG0765	amino acid transport
C9J86_RS15000	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
C9J86_RS15005	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
C9J86_RS15015	COG4129	membrane
C9J86_RS15030	COG1194	a g-specific adenine glycosylase
C9J86_RS15035	COG1988	membrane-bound metal-dependent