locus-tag class description RK88_RS00010 IPR035994 Nucleoside phosphorylase superfamily RK88_RS00010 IPR004402 Purine nucleoside phosphorylase DeoD-type RK88_RS00010 IPR018016 Nucleoside phosphorylase, conserved site RK88_RS00010 IPR000845 Nucleoside phosphorylase domain RK88_RS00015 IPR011343 Deoxyribose-phosphate aldolase RK88_RS00015 IPR013785 Aldolase-type TIM barrel RK88_RS00015 IPR002915 DeoC/FbaB/ lacD aldolase RK88_RS00015 IPR028581 Deoxyribose-phosphate aldolase type I RK88_RS00025 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site RK88_RS00025 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal RK88_RS00025 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily RK88_RS00025 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily RK88_RS00025 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic RK88_RS00025 IPR017459 Glycosyl transferase family 3, N-terminal domain RK88_RS00025 IPR000312 Glycosyl transferase, family 3 RK88_RS00025 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase RK88_RS00025 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily RK88_RS00035 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily RK88_RS00035 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RK88_RS00035 IPR003815 S-ribosylhomocysteinase (LuxS) RK88_RS00055 IPR011602 Type II pantothenate kinase, bacterial RK88_RS00055 IPR004567 Type II pantothenate kinase RK88_RS00060 IPR016181 Acyl-CoA N-acyltransferase RK88_RS00060 IPR000182 GNAT domain RK88_RS00065 IPR007759 HB1/Asxl, restriction endonuclease HTH domain RK88_RS00065 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily RK88_RS00065 IPR029757 DNA-directed RNA polymerase subunit delta RK88_RS00070 IPR004468 CTP synthase RK88_RS00070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS00070 IPR029062 Class I glutamine amidotransferase-like RK88_RS00070 IPR017456 CTP synthase, N-terminal RK88_RS00070 IPR017926 Glutamine amidotransferase RK88_RS00070 IPR033828 CTP synthase GATase domain RK88_RS00080 IPR013785 Aldolase-type TIM barrel RK88_RS00080 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 RK88_RS00080 IPR000771 Fructose-bisphosphate aldolase, class-II RK88_RS00085 IPR001986 Enolpyruvate transferase domain RK88_RS00085 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RK88_RS00085 IPR036968 Enolpyruvate transferase domain superfamily RK88_RS00085 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RK88_RS00095 IPR016162 Aldehyde dehydrogenase, N-terminal RK88_RS00095 IPR015590 Aldehyde dehydrogenase domain RK88_RS00095 IPR016161 Aldehyde/histidinol dehydrogenase RK88_RS00095 IPR016160 Aldehyde dehydrogenase, cysteine active site RK88_RS00095 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RK88_RS00095 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RK88_RS00095 IPR016163 Aldehyde dehydrogenase, C-terminal RK88_RS00100 IPR003593 AAA+ ATPase domain RK88_RS00100 IPR004665 Transcription termination factor Rho RK88_RS00100 IPR011129 Cold shock domain RK88_RS00100 IPR012340 Nucleic acid-binding, OB-fold RK88_RS00100 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RK88_RS00100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS00100 IPR041703 Transcription termination factor Rho, ATP binding domain RK88_RS00100 IPR011112 Rho termination factor, N-terminal RK88_RS00100 IPR011113 Rho termination factor, RNA-binding domain RK88_RS00100 IPR036269 Rho termination factor, N-terminal domain superfamily RK88_RS00105 IPR027493 Ribosomal protein L31 type B RK88_RS00105 IPR002150 Ribosomal protein L31 RK88_RS00105 IPR034704 L28p-like RK88_RS00105 IPR042105 Ribosomal protein L31 superfamily RK88_RS00115 IPR020633 Thymidine kinase, conserved site RK88_RS00115 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS00115 IPR001267 Thymidine kinase RK88_RS00120 IPR005139 Peptide chain release factor RK88_RS00120 IPR000352 Peptide chain release factor class I RK88_RS00120 IPR004373 Peptide chain release factor 1 RK88_RS00125 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RK88_RS00125 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific RK88_RS00125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS00125 IPR007848 Methyltransferase small domain RK88_RS00125 IPR004556 Methyltransferase HemK-like RK88_RS00125 IPR040758 Release factor glutamine methyltransferase, N-terminal domain RK88_RS00130 IPR006070 YrdC-like domain RK88_RS00130 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RK88_RS00130 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RK88_RS00130 IPR005145 Putative GTP-binding controlling metal-binding domain RK88_RS00130 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily RK88_RS00135 IPR017867 Protein-tyrosine phosphatase, low molecular weight RK88_RS00135 IPR023485 Phosphotyrosine protein phosphatase I RK88_RS00135 IPR036196 Phosphotyrosine protein phosphatase I superfamily RK88_RS00140 IPR028345 Aminoglycoside 3-N-acetyltransferase-like RK88_RS00140 IPR006340 Protein of unknown function DUF436 RK88_RS00145 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS00145 IPR001085 Serine hydroxymethyltransferase RK88_RS00145 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS00145 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS00145 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site RK88_RS00145 IPR039429 Serine hydroxymethyltransferase-like domain RK88_RS00150 IPR000836 Phosphoribosyltransferase domain RK88_RS00150 IPR005765 Uracil phosphoribosyl transferase RK88_RS00150 IPR029057 Phosphoribosyltransferase-like RK88_RS00150 IPR034332 Uracil phosphoribosyltransferase, bacterial-type RK88_RS00155 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like RK88_RS00155 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain RK88_RS00165 IPR035908 ATP synthase, F0 complex, subunit A superfamily RK88_RS00165 IPR023011 ATP synthase, F0 complex, subunit A, active site RK88_RS00165 IPR000568 ATP synthase, F0 complex, subunit A RK88_RS00170 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site RK88_RS00170 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast RK88_RS00170 IPR000454 ATP synthase, F0 complex, subunit C RK88_RS00170 IPR038662 F1F0 ATP synthase subunit C superfamily RK88_RS00170 IPR002379 V-ATPase proteolipid subunit C-like domain RK88_RS00170 IPR035921 F/V-ATP synthase subunit C superfamily RK88_RS00175 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast RK88_RS00175 IPR005864 ATP synthase, F0 complex, subunit b, bacterial RK88_RS00175 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily RK88_RS00180 IPR000711 ATPase, OSCP/delta subunit RK88_RS00180 IPR020781 ATPase, OSCP/delta subunit, conserved site RK88_RS00180 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily RK88_RS00185 IPR000793 ATP synthase, alpha subunit, C-terminal RK88_RS00185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS00185 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RK88_RS00185 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily RK88_RS00185 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily RK88_RS00185 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain RK88_RS00185 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RK88_RS00185 IPR005294 ATP synthase, F1 complex, alpha subunit RK88_RS00185 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain RK88_RS00185 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily RK88_RS00190 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily RK88_RS00190 IPR000131 ATP synthase, F1 complex, gamma subunit RK88_RS00195 IPR005722 ATP synthase, F1 complex, beta subunit RK88_RS00195 IPR003593 AAA+ ATPase domain RK88_RS00195 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain RK88_RS00195 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily RK88_RS00195 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS00195 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal RK88_RS00195 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain RK88_RS00195 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site RK88_RS00200 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal RK88_RS00200 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain RK88_RS00200 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit RK88_RS00200 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily RK88_RS00200 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal RK88_RS00220 IPR036968 Enolpyruvate transferase domain superfamily RK88_RS00220 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RK88_RS00220 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase RK88_RS00220 IPR001986 Enolpyruvate transferase domain RK88_RS00225 IPR029069 HotDog domain superfamily RK88_RS00225 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ RK88_RS00225 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ RK88_RS00235 IPR012340 Nucleic acid-binding, OB-fold RK88_RS00235 IPR011344 Single-stranded DNA-binding protein RK88_RS00235 IPR000424 Primosome PriB/single-strand DNA-binding RK88_RS00240 IPR010618 Transglycosylase-like RK88_RS00240 IPR023346 Lysozyme-like domain superfamily RK88_RS00250 IPR004305 Thiaminase-2/PQQC RK88_RS00250 IPR016084 Haem oxygenase-like, multi-helical RK88_RS00250 IPR027574 Thiaminase II RK88_RS00255 IPR029056 Ribokinase-like RK88_RS00255 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RK88_RS00255 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RK88_RS00260 IPR000417 Hydroxyethylthiazole kinase RK88_RS00260 IPR029056 Ribokinase-like RK88_RS00265 IPR022998 Thiamine phosphate synthase/TenI RK88_RS00265 IPR034291 Thiamine phosphate synthase RK88_RS00265 IPR013785 Aldolase-type TIM barrel RK88_RS00265 IPR036206 Thiamin phosphate synthase superfamily RK88_RS00270 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes RK88_RS00270 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 RK88_RS00270 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RK88_RS00285 IPR006674 HD domain RK88_RS00285 IPR003607 HD/PDEase domain RK88_RS00290 IPR022924 Cardiolipin synthase RK88_RS00290 IPR030874 Cardiolipin synthase, Firmicutes-type RK88_RS00290 IPR001736 Phospholipase D/Transphosphatidylase RK88_RS00290 IPR025202 Phospholipase D-like domain RK88_RS00290 IPR027379 Cardiolipin synthase N-terminal RK88_RS00295 IPR003735 Metal-sensitive transcriptional repressor RK88_RS00295 IPR038390 Metal-sensitive transcriptional repressor superfamily RK88_RS00315 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA RK88_RS00315 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB RK88_RS00315 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RK88_RS00320 IPR011761 ATP-grasp fold RK88_RS00320 IPR013815 ATP-grasp fold, subdomain 1 RK88_RS00320 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site RK88_RS00320 IPR005905 D-alanine--D-alanine ligase RK88_RS00320 IPR011095 D-alanine--D-alanine ligase, C-terminal RK88_RS00320 IPR011127 D-alanine--D-alanine ligase, N-terminal domain RK88_RS00320 IPR016185 Pre-ATP-grasp domain superfamily RK88_RS00325 IPR036615 Mur ligase, C-terminal domain superfamily RK88_RS00325 IPR004101 Mur ligase, C-terminal RK88_RS00325 IPR013221 Mur ligase, central RK88_RS00325 IPR036565 Mur-like, catalytic domain superfamily RK88_RS00325 IPR000713 Mur ligase, N-terminal catalytic domain RK88_RS00325 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase RK88_RS00325 IPR035911 MurE/MurF, N-terminal RK88_RS00330 IPR001650 Helicase, C-terminal RK88_RS00330 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS00330 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RK88_RS00330 IPR014014 RNA helicase, DEAD-box type, Q motif RK88_RS00330 IPR011545 DEAD/DEAH box helicase domain RK88_RS00330 IPR030880 DEAD-box ATP-dependent RNA helicase CshA RK88_RS00330 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK88_RS00335 IPR001789 Signal transduction response regulator, receiver domain RK88_RS00335 IPR011006 CheY-like superfamily RK88_RS00335 IPR039420 Transcriptional regulatory protein WalR-like RK88_RS00335 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS00335 IPR001867 OmpR/PhoB-type DNA-binding domain RK88_RS00340 IPR005467 Histidine kinase domain RK88_RS00340 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS00340 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS00340 IPR029016 GAF-like domain superfamily RK88_RS00340 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RK88_RS00340 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RK88_RS00340 IPR025201 Sensor protein KdpD, transmembrane domain RK88_RS00340 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal RK88_RS00340 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RK88_RS00340 IPR038318 KdpD, transmembrane domain superfamily RK88_RS00350 IPR004623 Potassium-transporting ATPase A chain RK88_RS00355 IPR023214 HAD superfamily RK88_RS00355 IPR036412 HAD-like superfamily RK88_RS00355 IPR008250 P-type ATPase, A domain superfamily RK88_RS00355 IPR023298 P-type ATPase, transmembrane domain superfamily RK88_RS00355 IPR018303 P-type ATPase, phosphorylation site RK88_RS00355 IPR023299 P-type ATPase, cytoplasmic domain N RK88_RS00355 IPR001757 P-type ATPase RK88_RS00355 IPR006391 P-type ATPase, B chain, subfamily IA RK88_RS00360 IPR003820 Potassium-transporting ATPase C chain RK88_RS00370 IPR005182 Domain of unknown function DUF304 RK88_RS00370 IPR014529 Uncharacterised conserved protein UCP026631 RK88_RS00380 IPR002582 Holo-[acyl carrier protein] synthase RK88_RS00380 IPR037143 4'-phosphopantetheinyl transferase domain superfamily RK88_RS00380 IPR008278 4'-phosphopantetheinyl transferase domain RK88_RS00380 IPR004568 Phosphopantetheine-protein transferase domain RK88_RS00385 IPR000821 Alanine racemase RK88_RS00385 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site RK88_RS00385 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RK88_RS00385 IPR029066 PLP-binding barrel RK88_RS00385 IPR011079 Alanine racemase, C-terminal RK88_RS00385 IPR001608 Alanine racemase, N-terminal RK88_RS00390 IPR013321 Arc-type ribbon-helix-helix RK88_RS00395 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RK88_RS00395 IPR003477 mRNA interferase PemK-like RK88_RS00405 IPR017944 KaiA/RbsU helical domain superfamily RK88_RS00405 IPR036457 PPM-type phosphatase domain superfamily RK88_RS00405 IPR001932 PPM-type phosphatase domain RK88_RS00405 IPR014787 Phosphoserine phosphatase RsbU, N-terminal RK88_RS00410 IPR036513 STAS domain superfamily RK88_RS00410 IPR002645 STAS domain RK88_RS00410 IPR003658 Anti-sigma factor antagonist RK88_RS00415 IPR010193 Serine-protein kinase RsbW RK88_RS00415 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS00415 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS00420 IPR000943 RNA polymerase sigma-70 RK88_RS00420 IPR014322 RNA polymerase sigma-B/F/G type RK88_RS00420 IPR014288 RNA polymerase sigma-B factor RK88_RS00420 IPR014284 RNA polymerase sigma-70 like domain RK88_RS00420 IPR007627 RNA polymerase sigma-70 region 2 RK88_RS00420 IPR007624 RNA polymerase sigma-70 region 3 RK88_RS00420 IPR013324 RNA polymerase sigma factor, region 3/4-like RK88_RS00420 IPR013325 RNA polymerase sigma factor, region 2 RK88_RS00420 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS00420 IPR007630 RNA polymerase sigma-70 region 4 RK88_RS00425 IPR037027 YqgF/RNase H-like domain superfamily RK88_RS00425 IPR023319 Tex-like protein, HTH domain superfamily RK88_RS00425 IPR018974 Tex-like protein, N-terminal RK88_RS00425 IPR032639 Tex protein, YqgF-like domain RK88_RS00425 IPR006641 YqgF/RNase H-like domain RK88_RS00425 IPR023323 Tex-like domain superfamily RK88_RS00425 IPR012340 Nucleic acid-binding, OB-fold RK88_RS00425 IPR012337 Ribonuclease H-like superfamily RK88_RS00425 IPR010994 RuvA domain 2-like RK88_RS00425 IPR022967 RNA-binding domain, S1 RK88_RS00425 IPR003029 S1 domain RK88_RS00425 IPR041692 HHH domain 9 RK88_RS00430 IPR023524 Uncharacterised protein family SprT-like RK88_RS00430 IPR035240 SprT-like, zinc ribbon domain RK88_RS00430 IPR006640 SprT-like RK88_RS00470 IPR011820 L-threonine dehydratase biosynthetic IlvA RK88_RS00470 IPR001926 Pyridoxal-phosphate dependent enzyme RK88_RS00470 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RK88_RS00470 IPR001721 Threonine dehydratase, ACT-like domain RK88_RS00470 IPR038110 Threonine dehydratase, ACT-like domain superfamily RK88_RS00470 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK88_RS00475 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain RK88_RS00475 IPR004431 3-isopropylmalate dehydratase, small subunit RK88_RS00475 IPR033940 3-isopropylmalate dehydratase, swivel domain RK88_RS00475 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RK88_RS00480 IPR018136 Aconitase family, 4Fe-4S cluster binding site RK88_RS00480 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RK88_RS00480 IPR004430 3-isopropylmalate dehydratase, large subunit RK88_RS00480 IPR036008 Aconitase, iron-sulfur domain RK88_RS00480 IPR033941 3-Isopropylmalate dehydratase, catalytic domain RK88_RS00480 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RK88_RS00485 IPR004429 Isopropylmalate dehydrogenase RK88_RS00485 IPR024084 Isopropylmalate dehydrogenase-like domain RK88_RS00485 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RK88_RS00490 IPR000891 Pyruvate carboxyltransferase RK88_RS00490 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily RK88_RS00490 IPR005671 2-isopropylmalate synthase, bacterial-type RK88_RS00490 IPR013785 Aldolase-type TIM barrel RK88_RS00490 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RK88_RS00495 IPR013116 Ketol-acid reductoisomerase, N-terminal RK88_RS00495 IPR000506 Ketol-acid reductoisomerase, C-terminal RK88_RS00495 IPR014359 Ketol-acid reductoisomerase, prokaryotic RK88_RS00495 IPR013023 Ketol-acid reductoisomerase RK88_RS00495 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RK88_RS00495 IPR036291 NAD(P)-binding domain superfamily RK88_RS00505 IPR029061 Thiamin diphosphate-binding fold RK88_RS00505 IPR039368 Acetolactate synthase large subunit, TPP binding domain RK88_RS00505 IPR012000 Thiamine pyrophosphate enzyme, central domain RK88_RS00505 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RK88_RS00505 IPR012846 Acetolactate synthase, large subunit, biosynthetic RK88_RS00505 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RK88_RS00505 IPR029035 DHS-like NAD/FAD-binding domain superfamily RK88_RS00510 IPR042096 Dihydroxy-acid dehydratase, C-terminal RK88_RS00510 IPR004404 Dihydroxy-acid dehydratase RK88_RS00510 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase RK88_RS00510 IPR037237 IlvD/EDD, N-terminal domain RK88_RS00510 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site RK88_RS00520 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE RK88_RS00520 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS00525 IPR000905 Gcp-like domain RK88_RS00525 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB RK88_RS00530 IPR000182 GNAT domain RK88_RS00530 IPR016181 Acyl-CoA N-acyltransferase RK88_RS00530 IPR006464 N-acetyltransferase RimI/Ard1 RK88_RS00535 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD RK88_RS00535 IPR017861 Kae1/TsaD family RK88_RS00535 IPR017860 Peptidase M22, conserved site RK88_RS00535 IPR000905 Gcp-like domain RK88_RS00540 IPR036187 DNA mismatch repair protein MutS, core domain superfamily RK88_RS00540 IPR016151 DNA mismatch repair protein MutS, N-terminal RK88_RS00540 IPR007695 DNA mismatch repair protein MutS-like, N-terminal RK88_RS00540 IPR007860 DNA mismatch repair protein MutS, connector domain RK88_RS00540 IPR005748 DNA mismatch repair protein MutS RK88_RS00540 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS00540 IPR017261 DNA mismatch repair protein MutS/MSH RK88_RS00540 IPR036678 MutS, connector domain superfamily RK88_RS00540 IPR007861 DNA mismatch repair protein MutS, clamp RK88_RS00540 IPR007696 DNA mismatch repair protein MutS, core RK88_RS00540 IPR000432 DNA mismatch repair protein MutS, C-terminal RK88_RS00550 IPR032781 ABC-transporter extension domain RK88_RS00550 IPR017871 ABC transporter, conserved site RK88_RS00550 IPR032524 ABC transporter Uup, C-terminal RK88_RS00550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS00550 IPR003593 AAA+ ATPase domain RK88_RS00550 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily RK88_RS00550 IPR003439 ABC transporter-like RK88_RS00555 IPR022876 Redox-sensing transcriptional repressor Rex RK88_RS00555 IPR036291 NAD(P)-binding domain superfamily RK88_RS00555 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS00555 IPR009718 Rex DNA-binding, C-terminal domain RK88_RS00555 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS00555 IPR003781 CoA-binding RK88_RS00560 IPR007272 Sulphur transport domain RK88_RS00565 IPR036868 TusA-like domain superfamily RK88_RS00565 IPR001455 TusA-like domain RK88_RS00570 IPR024041 Ammonium transporter AmtB-like domain RK88_RS00570 IPR018047 Ammonium transporter, conserved site RK88_RS00570 IPR001905 Ammonium transporter RK88_RS00570 IPR029020 Ammonium/urea transporter RK88_RS00575 IPR028082 Periplasmic binding protein-like I RK88_RS00575 IPR000843 LacI-type HTH domain RK88_RS00575 IPR025997 Periplasmic binding protein RK88_RS00575 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RK88_RS00580 IPR006232 Sucrose-6-phosphate hydrolase RK88_RS00580 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily RK88_RS00580 IPR013148 Glycosyl hydrolase family 32, N-terminal RK88_RS00580 IPR013189 Glycosyl hydrolase family 32, C-terminal RK88_RS00580 IPR018053 Glycoside hydrolase, family 32, active site RK88_RS00580 IPR001362 Glycoside hydrolase, family 32 RK88_RS00580 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RK88_RS00585 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RK88_RS00585 IPR011611 Carbohydrate kinase PfkB RK88_RS00585 IPR029056 Ribokinase-like RK88_RS00590 IPR001789 Signal transduction response regulator, receiver domain RK88_RS00590 IPR011006 CheY-like superfamily RK88_RS00590 IPR007492 LytTR DNA-binding domain RK88_RS00605 IPR006741 Accessory gene regulator B RK88_RS00610 IPR008034 Delta-hemolysin RK88_RS00615 IPR003010 Carbon-nitrogen hydrolase RK88_RS00615 IPR036526 Carbon-nitrogen hydrolase superfamily RK88_RS00615 IPR001110 Uncharacterised protein family UPF0012, conserved site RK88_RS00630 IPR003675 CAAX prenyl protease 2 RK88_RS00635 IPR018369 Chaperonin GroES, conserved site RK88_RS00635 IPR020818 GroES chaperonin family RK88_RS00635 IPR011032 GroES-like superfamily RK88_RS00635 IPR037124 GroES chaperonin superfamily RK88_RS00640 IPR027410 TCP-1-like chaperonin intermediate domain superfamily RK88_RS00640 IPR018370 Chaperonin Cpn60, conserved site RK88_RS00640 IPR001844 Chaperonin Cpn60 RK88_RS00640 IPR027409 GroEL-like apical domain superfamily RK88_RS00640 IPR002423 Chaperonin Cpn60/TCP-1 family RK88_RS00640 IPR027413 GroEL-like equatorial domain superfamily RK88_RS00645 IPR013762 Integrase-like, catalytic domain superfamily RK88_RS00645 IPR002104 Integrase, catalytic domain RK88_RS00645 IPR010998 Integrase/recombinase, N-terminal RK88_RS00645 IPR004107 Integrase, SAM-like, N-terminal RK88_RS00645 IPR011010 DNA breaking-rejoining enzyme, catalytic core RK88_RS00730 IPR018925 Phage terminase small subunit RK88_RS00730 IPR038713 Terminase small subunit, N-terminal domain superfamily RK88_RS00730 IPR005335 Terminase small subunit RK88_RS00735 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS00735 IPR016091 Superantigen toxin, C-terminal RK88_RS00735 IPR008992 Enterotoxin RK88_RS00735 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS00775 IPR004772 TrkH potassium transport family RK88_RS00775 IPR003445 Cation transporter RK88_RS00780 IPR002933 Peptidase M20 RK88_RS00780 IPR036264 Bacterial exopeptidase dimerisation domain RK88_RS00780 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RK88_RS00780 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase RK88_RS00780 IPR011650 Peptidase M20, dimerisation domain RK88_RS00785 IPR036435 Leukocidin/porin MspA superfamily RK88_RS00785 IPR016183 Leukocidin/Hemolysin toxin RK88_RS00785 IPR003963 Bi-component toxin, staphylococci RK88_RS00790 IPR036435 Leukocidin/porin MspA superfamily RK88_RS00790 IPR016183 Leukocidin/Hemolysin toxin RK88_RS00790 IPR003963 Bi-component toxin, staphylococci RK88_RS00825 IPR006200 Transcription regulator LexA RK88_RS00825 IPR039418 LexA-like RK88_RS00825 IPR036286 LexA/Signal peptidase-like superfamily RK88_RS00825 IPR006199 LexA repressor, DNA-binding domain RK88_RS00825 IPR006197 Peptidase S24, LexA-like RK88_RS00825 IPR015927 Peptidase S24/S26A/S26B/S26C RK88_RS00825 IPR019885 Transcription regulator HTH, AsnC-type, conserved site RK88_RS00825 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS00825 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS00910 IPR012340 Nucleic acid-binding, OB-fold RK88_RS00910 IPR000424 Primosome PriB/single-strand DNA-binding RK88_RS00910 IPR011344 Single-stranded DNA-binding protein RK88_RS00950 IPR036157 dUTPase-like superfamily RK88_RS00950 IPR029054 dUTPase-like RK88_RS00950 IPR033704 dUTPase, trimeric RK88_RS00950 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase RK88_RS01000 IPR001907 ATP-dependent Clp protease proteolytic subunit RK88_RS01000 IPR029045 ClpP/crotonase-like domain superfamily RK88_RS01000 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RK88_RS01000 IPR033135 ClpP, histidine active site RK88_RS01000 IPR018215 ClpP, Ser active site RK88_RS01050 IPR016047 Peptidase M23 RK88_RS01050 IPR007340 Opacity-associated protein A RK88_RS01050 IPR011055 Duplicated hybrid motif RK88_RS01085 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS01085 IPR016091 Superantigen toxin, C-terminal RK88_RS01085 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS01085 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS01085 IPR008992 Enterotoxin RK88_RS01085 IPR006177 Staphylococcal/streptococcal toxin, bacterial RK88_RS01105 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily RK88_RS01105 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RK88_RS01105 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS01105 IPR003646 SH3-like domain, bacterial-type RK88_RS01105 IPR007921 CHAP domain RK88_RS01110 IPR004093 Staphylokinase/Streptokinase RK88_RS01110 IPR036120 Staphylokinase/Streptokinase superfamily RK88_RS01120 IPR007921 CHAP domain RK88_RS01120 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain RK88_RS01120 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS01120 IPR003646 SH3-like domain, bacterial-type RK88_RS01125 IPR023253 FPRL1/chemotaxis inhibitory protein RK88_RS01125 IPR020986 Chemotaxis inhibitory protein RK88_RS01125 IPR038529 CHIPS superfamily RK88_RS01130 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RK88_RS01130 IPR021612 Staphylococcal complement inhibitor SCIN RK88_RS01155 IPR005298 MAP domain RK88_RS01180 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS01180 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS01180 IPR000524 Transcription regulator HTH, GntR RK88_RS01185 IPR003593 AAA+ ATPase domain RK88_RS01185 IPR003439 ABC transporter-like RK88_RS01185 IPR017871 ABC transporter, conserved site RK88_RS01185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS01195 IPR017871 ABC transporter, conserved site RK88_RS01195 IPR003439 ABC transporter-like RK88_RS01195 IPR003593 AAA+ ATPase domain RK88_RS01195 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS01240 IPR011045 Nitrous oxide reductase, N-terminal RK88_RS01240 IPR015943 WD40/YVTN repeat-like-containing domain superfamily RK88_RS01240 IPR019405 Lactonase, 7-bladed beta propeller RK88_RS01245 IPR015590 Aldehyde dehydrogenase domain RK88_RS01245 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent RK88_RS01245 IPR016160 Aldehyde dehydrogenase, cysteine active site RK88_RS01245 IPR016163 Aldehyde dehydrogenase, C-terminal RK88_RS01245 IPR016161 Aldehyde/histidinol dehydrogenase RK88_RS01245 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RK88_RS01245 IPR016162 Aldehyde dehydrogenase, N-terminal RK88_RS01255 IPR001667 DDH domain RK88_RS01255 IPR038763 DHH phosphoesterase superfamily RK88_RS01255 IPR004097 DHHA2 domain RK88_RS01255 IPR038222 DHHA2 domain superfamily RK88_RS01255 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable RK88_RS01260 IPR036380 Isochorismatase-like superfamily RK88_RS01260 IPR000868 Isochorismatase-like RK88_RS01270 IPR001898 Solute carrier family 13 RK88_RS01280 IPR001086 Prephenate dehydratase RK88_RS01280 IPR018528 Prephenate dehydratase, conserved site RK88_RS01280 IPR002912 ACT domain RK88_RS01280 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase RK88_RS01285 IPR036119 Nitric oxide synthase, N-terminal domain superfamily RK88_RS01285 IPR004030 Nitric oxide synthase, N-terminal RK88_RS01285 IPR017142 Nitric oxide synthase, oxygenase subunit RK88_RS01290 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain RK88_RS01290 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase RK88_RS01290 IPR013785 Aldolase-type TIM barrel RK88_RS01290 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal RK88_RS01290 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain RK88_RS01290 IPR007229 Nicotinate phosphoribosyltransferase family RK88_RS01290 IPR006405 Nicotinate phosphoribosyltransferase pncB-type RK88_RS01295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS01295 IPR022926 NH(3)-dependent NAD(+) synthetase RK88_RS01295 IPR003694 NAD(+) synthetase RK88_RS01295 IPR022310 NAD/GMP synthase RK88_RS01300 IPR022930 Protein of unknown function UPF0316 RK88_RS01300 IPR019264 Domain of unknown function DUF2179 RK88_RS01305 IPR025930 NETI protein RK88_RS01315 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS01315 IPR025660 Cysteine peptidase, histidine active site RK88_RS01315 IPR037155 Staphopain proregion superfamily RK88_RS01315 IPR028076 Staphopain proregion RK88_RS01315 IPR008750 Staphopain peptidase C47 RK88_RS01320 IPR019468 Adenylosuccinate lyase C-terminal RK88_RS01320 IPR022761 Fumarate lyase, N-terminal RK88_RS01320 IPR020557 Fumarate lyase, conserved site RK88_RS01320 IPR024083 Fumarase/histidase, N-terminal RK88_RS01320 IPR008948 L-Aspartase-like RK88_RS01320 IPR004769 Adenylosuccinate lyase RK88_RS01320 IPR000362 Fumarate lyase family RK88_RS01325 IPR013368 TrpR homologue YerC/YecD RK88_RS01325 IPR038116 TrpR-like superfamily RK88_RS01325 IPR010921 Trp repressor/replication initiator RK88_RS01325 IPR000831 Trp repressor RK88_RS01330 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase RK88_RS01330 IPR038597 GGGP/HepGP synthase superfamily RK88_RS01330 IPR039074 GGGP/HepGP synthase group I RK88_RS01335 IPR034739 UvrD/AddA helicase, N-terminal RK88_RS01335 IPR013986 DExx box DNA helicase domain superfamily RK88_RS01335 IPR005751 ATP-dependent DNA helicase PcrA RK88_RS01335 IPR014017 UvrD-like DNA helicase, C-terminal RK88_RS01335 IPR000212 DNA helicase, UvrD/REP type RK88_RS01335 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS01335 IPR014016 UvrD-like helicase, ATP-binding domain RK88_RS01340 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type RK88_RS01340 IPR010994 RuvA domain 2-like RK88_RS01340 IPR001357 BRCT domain RK88_RS01340 IPR036420 BRCT domain superfamily RK88_RS01340 IPR012340 Nucleic acid-binding, OB-fold RK88_RS01340 IPR013840 NAD-dependent DNA ligase, N-terminal RK88_RS01340 IPR041663 DisA/LigA, helix-hairpin-helix motif RK88_RS01340 IPR013839 NAD-dependent DNA ligase, adenylation RK88_RS01340 IPR001679 NAD-dependent DNA ligase RK88_RS01340 IPR033136 NAD-dependent DNA ligase, conserved site RK88_RS01340 IPR018239 NAD-dependent DNA ligase, active site RK88_RS01340 IPR004150 NAD-dependent DNA ligase, OB-fold RK88_RS01340 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RK88_RS01345 IPR011426 CamS sex pheromone cAM373 RK88_RS01350 IPR038377 Sodium/glucose symporter superfamily RK88_RS01350 IPR011851 Sodium/proline symporter RK88_RS01350 IPR001734 Sodium/solute symporter RK88_RS01355 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C RK88_RS01355 IPR003837 Glu-tRNAGln amidotransferase C subunit RK88_RS01360 IPR020556 Amidase, conserved site RK88_RS01360 IPR036928 Amidase signature (AS) superfamily RK88_RS01360 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit RK88_RS01360 IPR000120 Amidase RK88_RS01360 IPR023631 Amidase signature domain RK88_RS01365 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RK88_RS01365 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic RK88_RS01365 IPR018027 Asn/Gln amidotransferase RK88_RS01365 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like RK88_RS01365 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 RK88_RS01365 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E RK88_RS01365 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit RK88_RS01365 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site RK88_RS01365 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 RK88_RS01375 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RK88_RS01375 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RK88_RS01375 IPR005218 Diacylglycerol/lipid kinase RK88_RS01375 IPR001206 Diacylglycerol kinase, catalytic domain RK88_RS01380 IPR030391 RNA methyltransferase TrmA, conserved site RK88_RS01380 IPR030390 RNA methyltransferase TrmA, active site RK88_RS01380 IPR012340 Nucleic acid-binding, OB-fold RK88_RS01380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS01380 IPR010280 (Uracil-5)-methyltransferase family RK88_RS01390 IPR036775 DNA polymerase, Y-family, little finger domain superfamily RK88_RS01390 IPR017961 DNA polymerase, Y-family, little finger domain RK88_RS01390 IPR022880 DNA polymerase IV RK88_RS01390 IPR001126 UmuC domain RK88_RS01405 IPR012347 Ferritin-like RK88_RS01405 IPR001519 Ferritin RK88_RS01405 IPR009040 Ferritin-like diiron domain RK88_RS01405 IPR041719 Ferritin, prokaryotic-type RK88_RS01405 IPR008331 Ferritin/DPS protein domain RK88_RS01405 IPR009078 Ferritin-like superfamily RK88_RS01410 IPR013221 Mur ligase, central RK88_RS01410 IPR036565 Mur-like, catalytic domain superfamily RK88_RS01410 IPR013564 Domain of unknown function DUF1727 RK88_RS01415 IPR011698 CobB/CobQ-like glutamine amidotransferase RK88_RS01415 IPR017929 CobB/CobQ glutamine amidotransferase RK88_RS01415 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 RK88_RS01415 IPR029062 Class I glutamine amidotransferase-like RK88_RS01430 IPR010343 Aromatic acid exporter family member 1 RK88_RS01450 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 RK88_RS01450 IPR036005 Creatinase/aminopeptidase-like RK88_RS01450 IPR000994 Peptidase M24 RK88_RS01450 IPR001714 Peptidase M24, methionine aminopeptidase RK88_RS01465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS01465 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RK88_RS01465 IPR017202 Sensor histidine kinase LiaS/VraS RK88_RS01465 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS01470 IPR016032 Signal transduction response regulator, C-terminal effector RK88_RS01470 IPR001789 Signal transduction response regulator, receiver domain RK88_RS01470 IPR000792 Transcription regulator LuxR, C-terminal RK88_RS01470 IPR011006 CheY-like superfamily RK88_RS01475 IPR017039 Virulence factor BrkB RK88_RS01485 IPR036196 Phosphotyrosine protein phosphatase I superfamily RK88_RS01485 IPR017867 Protein-tyrosine phosphatase, low molecular weight RK88_RS01485 IPR023485 Phosphotyrosine protein phosphatase I RK88_RS01490 IPR009507 Protein of unknown function UPF0435 RK88_RS01495 IPR035097 Peptidase M29, N-terminal RK88_RS01495 IPR000787 Peptidase M29 RK88_RS01500 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain RK88_RS01500 IPR006683 Thioesterase domain RK88_RS01500 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase RK88_RS01500 IPR029069 HotDog domain superfamily RK88_RS01505 IPR013785 Aldolase-type TIM barrel RK88_RS01505 IPR007197 Radical SAM RK88_RS01505 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB RK88_RS01505 IPR014866 YfkB-like domain RK88_RS01515 IPR029062 Class I glutamine amidotransferase-like RK88_RS01515 IPR002818 DJ-1/PfpI RK88_RS01515 IPR006286 Deglycase PfpI RK88_RS01520 IPR001264 Glycosyl transferase, family 51 RK88_RS01520 IPR022978 Monofunctional glycosyl transferase RK88_RS01520 IPR023346 Lysozyme-like domain superfamily RK88_RS01520 IPR036950 Penicillin binding protein transglycosylase domain RK88_RS01525 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS01525 IPR003783 Regulatory protein RecX RK88_RS01535 IPR017871 ABC transporter, conserved site RK88_RS01535 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS01535 IPR036779 LysM domain superfamily RK88_RS01535 IPR018392 LysM domain RK88_RS01535 IPR015860 ABC transporter, teichoic acids export, TagH RK88_RS01535 IPR003593 AAA+ ATPase domain RK88_RS01535 IPR003439 ABC transporter-like RK88_RS01550 IPR007404 LexA-binding, inner membrane-associated putative hydrolase RK88_RS01555 IPR005760 A/G-specific adenine glycosylase MutY RK88_RS01555 IPR029119 MutY, C-terminal RK88_RS01555 IPR015797 NUDIX hydrolase-like domain superfamily RK88_RS01555 IPR011257 DNA glycosylase RK88_RS01555 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RK88_RS01555 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RK88_RS01555 IPR003265 HhH-GPD domain RK88_RS01560 IPR016882 Uncharacterised protein family UPF0374 RK88_RS01560 IPR035930 FomD-like superfamily RK88_RS01560 IPR007295 Domain of unknown function DUF402 RK88_RS01565 IPR039421 Type I protein exporter RK88_RS01565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS01565 IPR017871 ABC transporter, conserved site RK88_RS01565 IPR003439 ABC transporter-like RK88_RS01565 IPR036640 ABC transporter type 1, transmembrane domain superfamily RK88_RS01565 IPR003593 AAA+ ATPase domain RK88_RS01565 IPR011527 ABC transporter type 1, transmembrane domain RK88_RS01570 IPR010343 Aromatic acid exporter family member 1 RK88_RS01575 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS01575 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS01575 IPR005814 Aminotransferase class-III RK88_RS01575 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS01575 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase RK88_RS01580 IPR013766 Thioredoxin domain RK88_RS01580 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RK88_RS01580 IPR024706 Peroxiredoxin, AhpC-type RK88_RS01580 IPR036249 Thioredoxin-like superfamily RK88_RS01585 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK88_RS01585 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK88_RS01585 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RK88_RS01585 IPR036291 NAD(P)-binding domain superfamily RK88_RS01590 IPR002481 Ferric-uptake regulator RK88_RS01590 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS01590 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS01750 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS01750 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RK88_RS01750 IPR035906 MetI-like superfamily RK88_RS01755 IPR003593 AAA+ ATPase domain RK88_RS01755 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RK88_RS01755 IPR017871 ABC transporter, conserved site RK88_RS01755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS01755 IPR003439 ABC transporter-like RK88_RS01760 IPR004453 Epoxyqueuosine reductase QueG RK88_RS01760 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RK88_RS01760 IPR013542 Domain of unknown function DUF1730 RK88_RS01760 IPR016024 Armadillo-type fold RK88_RS01760 IPR011989 Armadillo-like helical RK88_RS01760 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RK88_RS01765 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK88_RS01765 IPR029028 Alpha/beta knot methyltransferases RK88_RS01765 IPR001537 tRNA/rRNA methyltransferase, SpoU type RK88_RS01765 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase RK88_RS01785 IPR008948 L-Aspartase-like RK88_RS01785 IPR022761 Fumarate lyase, N-terminal RK88_RS01785 IPR000362 Fumarate lyase family RK88_RS01785 IPR005677 Fumarate hydratase, class II RK88_RS01785 IPR024083 Fumarase/histidase, N-terminal RK88_RS01785 IPR020557 Fumarate lyase, conserved site RK88_RS01785 IPR018951 Fumarase C, C-terminal RK88_RS01790 IPR036986 RNA-binding S4 domain superfamily RK88_RS01790 IPR002942 RNA-binding S4 domain RK88_RS01790 IPR006145 Pseudouridine synthase, RsuA/RluA RK88_RS01790 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RK88_RS01790 IPR020103 Pseudouridine synthase, catalytic domain superfamily RK88_RS01790 IPR006225 Pseudouridine synthase, RluC/RluD RK88_RS01795 IPR003018 GAF domain RK88_RS01795 IPR029016 GAF-like domain superfamily RK88_RS01795 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS01795 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS01795 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RK88_RS01800 IPR016032 Signal transduction response regulator, C-terminal effector RK88_RS01800 IPR001789 Signal transduction response regulator, receiver domain RK88_RS01800 IPR000792 Transcription regulator LuxR, C-terminal RK88_RS01800 IPR011006 CheY-like superfamily RK88_RS01810 IPR007383 Protein of unknown function DUF445 RK88_RS01810 IPR016991 Protein of unknown function UCP032178 RK88_RS01815 IPR023378 YheA/YmcA-like domain superfamily RK88_RS01815 IPR010368 Control of competence regulator ComK, YlbF/YmcA RK88_RS01825 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain RK88_RS01825 IPR029052 Metallo-dependent phosphatase-like RK88_RS01825 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RK88_RS01825 IPR014576 Predicted phosphoesterase, YhaO type RK88_RS01835 IPR020873 3'-5' exoribonuclease YhaM RK88_RS01835 IPR006674 HD domain RK88_RS01835 IPR003607 HD/PDEase domain RK88_RS01840 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type RK88_RS01840 IPR027304 Trigger factor/SurA domain superfamily RK88_RS01840 IPR023059 Foldase protein PrsA RK88_RS01855 IPR036265 HIT-like superfamily RK88_RS01855 IPR039384 HINT family RK88_RS01855 IPR019808 Histidine triad, conserved site RK88_RS01855 IPR001310 Histidine triad (HIT) protein RK88_RS01855 IPR011146 HIT-like domain RK88_RS01860 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS01860 IPR003593 AAA+ ATPase domain RK88_RS01860 IPR003439 ABC transporter-like RK88_RS01870 IPR011008 Dimeric alpha-beta barrel RK88_RS01870 IPR007138 Antibiotic biosynthesis monooxygenase domain RK88_RS01880 IPR038071 UROD/MetE-like superfamily RK88_RS01880 IPR006361 Uroporphyrinogen decarboxylase HemE RK88_RS01880 IPR000257 Uroporphyrinogen decarboxylase (URO-D) RK88_RS01945 IPR016091 Superantigen toxin, C-terminal RK88_RS01945 IPR006177 Staphylococcal/streptococcal toxin, bacterial RK88_RS01945 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS01945 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS01945 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS01945 IPR008992 Enterotoxin RK88_RS01950 IPR008992 Enterotoxin RK88_RS01950 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS01950 IPR016091 Superantigen toxin, C-terminal RK88_RS01950 IPR006177 Staphylococcal/streptococcal toxin, bacterial RK88_RS01950 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS01950 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS01955 IPR008992 Enterotoxin RK88_RS01955 IPR016091 Superantigen toxin, C-terminal RK88_RS01955 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS01955 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS01955 IPR006177 Staphylococcal/streptococcal toxin, bacterial RK88_RS01955 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS01960 IPR006177 Staphylococcal/streptococcal toxin, bacterial RK88_RS01960 IPR008992 Enterotoxin RK88_RS01960 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS01960 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS01960 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS01960 IPR016091 Superantigen toxin, C-terminal RK88_RS01965 IPR006177 Staphylococcal/streptococcal toxin, bacterial RK88_RS01965 IPR008992 Enterotoxin RK88_RS01965 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS01965 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS01965 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS01965 IPR016091 Superantigen toxin, C-terminal RK88_RS01970 IPR006177 Staphylococcal/streptococcal toxin, bacterial RK88_RS01970 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS01970 IPR016091 Superantigen toxin, C-terminal RK88_RS01970 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS01970 IPR008992 Enterotoxin RK88_RS01970 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS02015 IPR028301 Serine proteases, V8 family, histidine active site RK88_RS02015 IPR001254 Serine proteases, trypsin domain RK88_RS02015 IPR008256 Peptidase S1B RK88_RS02015 IPR008353 Peptidase S1B, exfoliative toxin RK88_RS02015 IPR009003 Peptidase S1, PA clan RK88_RS02020 IPR008353 Peptidase S1B, exfoliative toxin RK88_RS02020 IPR009003 Peptidase S1, PA clan RK88_RS02020 IPR001254 Serine proteases, trypsin domain RK88_RS02020 IPR028301 Serine proteases, V8 family, histidine active site RK88_RS02020 IPR008256 Peptidase S1B RK88_RS02030 IPR009003 Peptidase S1, PA clan RK88_RS02030 IPR008256 Peptidase S1B RK88_RS02030 IPR008353 Peptidase S1B, exfoliative toxin RK88_RS02030 IPR001254 Serine proteases, trypsin domain RK88_RS02030 IPR028301 Serine proteases, V8 family, histidine active site RK88_RS02040 IPR009003 Peptidase S1, PA clan RK88_RS02040 IPR008256 Peptidase S1B RK88_RS02040 IPR028301 Serine proteases, V8 family, histidine active site RK88_RS02050 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RK88_RS02050 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS02050 IPR004546 Restriction endonuclease, type I, HsdM RK88_RS02050 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily RK88_RS02050 IPR003356 DNA methylase, adenine-specific RK88_RS02050 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RK88_RS02085 IPR011013 Galactose mutarotase-like domain superfamily RK88_RS02085 IPR004103 Polysaccharide lyase family 8, C-terminal RK88_RS02085 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical RK88_RS02085 IPR008929 Chondroitin AC/alginate lyase RK88_RS02085 IPR003159 Polysaccharide lyase family 8, central domain RK88_RS02085 IPR014718 Glycoside hydrolase-type carbohydrate-binding RK88_RS02085 IPR038970 Polysaccharide lyase 8 RK88_RS02085 IPR011071 Polysaccharide lyase family 8-like, C-terminal RK88_RS02160 IPR010192 2-succinylbenzoate--CoA ligase RK88_RS02160 IPR025110 AMP-binding enzyme, C-terminal domain RK88_RS02160 IPR000873 AMP-dependent synthetase/ligase RK88_RS02160 IPR042099 AMP-dependent synthetase-like superfamily RK88_RS02170 IPR002696 Putative membrane protein insertion efficiency factor RK88_RS02175 IPR015797 NUDIX hydrolase-like domain superfamily RK88_RS02175 IPR020084 NUDIX hydrolase, conserved site RK88_RS02175 IPR022925 NADH pyrophosphatase NudC RK88_RS02175 IPR015376 Zinc ribbon, NADH pyrophosphatase RK88_RS02175 IPR000086 NUDIX hydrolase domain RK88_RS02180 IPR029058 Alpha/Beta hydrolase fold RK88_RS02180 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain RK88_RS02180 IPR002471 Peptidase S9, serine active site RK88_RS02185 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal RK88_RS02185 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal RK88_RS02185 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site RK88_RS02185 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising RK88_RS02190 IPR022631 S-adenosylmethionine synthetase, conserved site RK88_RS02190 IPR002133 S-adenosylmethionine synthetase RK88_RS02190 IPR022629 S-adenosylmethionine synthetase, central domain RK88_RS02190 IPR022628 S-adenosylmethionine synthetase, N-terminal RK88_RS02190 IPR022636 S-adenosylmethionine synthetase superfamily RK88_RS02190 IPR022630 S-adenosylmethionine synthetase, C-terminal RK88_RS02200 IPR036812 NADP-dependent oxidoreductase domain superfamily RK88_RS02200 IPR023210 NADP-dependent oxidoreductase domain RK88_RS02200 IPR020471 Aldo/keto reductase RK88_RS02200 IPR018170 Aldo/keto reductase, conserved site RK88_RS02205 IPR003691 Putative fluoride ion transporter CrcB RK88_RS02210 IPR003691 Putative fluoride ion transporter CrcB RK88_RS02220 IPR022999 Transaldolase type 3B, putative RK88_RS02220 IPR013785 Aldolase-type TIM barrel RK88_RS02220 IPR001585 Transaldolase/Fructose-6-phosphate aldolase RK88_RS02220 IPR018225 Transaldolase, active site RK88_RS02220 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial RK88_RS02220 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase RK88_RS02245 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS02245 IPR000792 Transcription regulator LuxR, C-terminal RK88_RS02245 IPR014284 RNA polymerase sigma-70 like domain RK88_RS02245 IPR016032 Signal transduction response regulator, C-terminal effector RK88_RS02245 IPR013325 RNA polymerase sigma factor, region 2 RK88_RS02245 IPR007627 RNA polymerase sigma-70 region 2 RK88_RS02255 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain RK88_RS02255 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily RK88_RS02255 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RK88_RS02255 IPR025987 GW domain RK88_RS02255 IPR038200 GW domain superfamily RK88_RS02260 IPR000802 Arsenical pump membrane protein, ArsB RK88_RS02265 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS02265 IPR001845 HTH ArsR-type DNA-binding domain RK88_RS02265 IPR018334 ArsR-type transcription regulator, HTH motif RK88_RS02265 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS02265 IPR011991 ArsR-like helix-turn-helix domain RK88_RS02275 IPR004794 Riboflavin biosynthesis protein RibD RK88_RS02275 IPR016192 APOBEC/CMP deaminase, zinc-binding RK88_RS02275 IPR024072 Dihydrofolate reductase-like domain superfamily RK88_RS02275 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal RK88_RS02275 IPR016193 Cytidine deaminase-like RK88_RS02275 IPR002125 Cytidine and deoxycytidylate deaminase domain RK88_RS02275 IPR011549 Riboflavin-specific deaminase, C-terminal RK88_RS02280 IPR026017 Lumazine-binding domain RK88_RS02280 IPR001783 Lumazine-binding protein RK88_RS02280 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily RK88_RS02280 IPR017938 Riboflavin synthase-like beta-barrel RK88_RS02285 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily RK88_RS02285 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB RK88_RS02285 IPR032677 GTP cyclohydrolase II RK88_RS02285 IPR000926 GTP cyclohydrolase II, RibA RK88_RS02285 IPR016299 Riboflavin biosynthesis protein RibBA RK88_RS02285 IPR036144 RibA-like superfamily RK88_RS02290 IPR034964 Lumazine synthase RK88_RS02290 IPR002180 Lumazine/riboflavin synthase RK88_RS02290 IPR036467 Lumazine/riboflavin synthase superfamily RK88_RS02295 IPR002872 Proline dehydrogenase domain RK88_RS02295 IPR029041 FAD-linked oxidoreductase-like RK88_RS02295 IPR008219 Proline dehydrogenase, bacteria and archaea RK88_RS02295 IPR015659 Proline oxidase family RK88_RS02310 IPR022742 Serine aminopeptidase, S33 RK88_RS02310 IPR029058 Alpha/Beta hydrolase fold RK88_RS02310 IPR000073 Alpha/beta hydrolase fold-1 RK88_RS02315 IPR010166 Transcriptional regulator SarA/Rot RK88_RS02315 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS02315 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS02315 IPR016998 HTH-type transcriptional regulator Rot RK88_RS02315 IPR000835 MarR-type HTH domain RK88_RS02320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS02320 IPR010719 Putative rRNA methylase RK88_RS02325 IPR039661 ELP3/YhcC RK88_RS02325 IPR006638 Elp3/MiaB/NifB RK88_RS02325 IPR005911 Protein YhcC-like RK88_RS02325 IPR032432 Radical SAM, C-terminal extension RK88_RS02325 IPR007197 Radical SAM RK88_RS02325 IPR023404 Radical SAM, alpha/beta horseshoe RK88_RS02330 IPR036259 MFS transporter superfamily RK88_RS02330 IPR020846 Major facilitator superfamily domain RK88_RS02330 IPR011701 Major facilitator superfamily RK88_RS02335 IPR015413 Methionyl/Leucyl tRNA synthetase RK88_RS02335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS02335 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RK88_RS02335 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RK88_RS02335 IPR025709 Leucyl-tRNA synthetase, editing domain RK88_RS02335 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RK88_RS02335 IPR002300 Aminoacyl-tRNA synthetase, class Ia RK88_RS02335 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RK88_RS02335 IPR002302 Leucine-tRNA ligase RK88_RS02345 IPR009063 Immunoglobulin/albumin-binding domain superfamily RK88_RS02345 IPR026361 Extracellular matrix-binding protein Ebh domain RK88_RS02345 IPR020840 Extracellular matrix-binding protein ebh, GA module RK88_RS02345 IPR005877 YSIRK Gram-positive signal peptide RK88_RS02345 IPR011439 Domain of unknown function DUF1542 RK88_RS02345 IPR002988 Protein G-related albumin-binding (GA) module RK88_RS02350 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like RK88_RS02350 IPR023166 HI0933-like insert domain superfamily RK88_RS02350 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS02355 IPR002797 Polysaccharide biosynthesis protein RK88_RS02355 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type RK88_RS02355 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain RK88_RS02360 IPR036986 RNA-binding S4 domain superfamily RK88_RS02360 IPR002942 RNA-binding S4 domain RK88_RS02360 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RK88_RS02360 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RK88_RS02360 IPR006145 Pseudouridine synthase, RsuA/RluA RK88_RS02360 IPR020103 Pseudouridine synthase, catalytic domain superfamily RK88_RS02360 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain RK88_RS02370 IPR010964 Peptidase M20A, peptidase V-related RK88_RS02370 IPR036264 Bacterial exopeptidase dimerisation domain RK88_RS02370 IPR011650 Peptidase M20, dimerisation domain RK88_RS02370 IPR002933 Peptidase M20 RK88_RS02375 IPR005784 D-amino acid aminotransferase RK88_RS02375 IPR036038 Aminotransferase-like, PLP-dependent enzymes RK88_RS02375 IPR018300 Aminotransferase, class IV, conserved site RK88_RS02375 IPR001544 Aminotransferase class IV RK88_RS02380 IPR002575 Aminoglycoside phosphotransferase RK88_RS02380 IPR011009 Protein kinase-like domain superfamily RK88_RS02385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS02385 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type RK88_RS02395 IPR023650 Beta-lactamase, class-A active site RK88_RS02395 IPR000871 Beta-lactamase, class-A RK88_RS02395 IPR012338 Beta-lactamase/transpeptidase-like RK88_RS02395 IPR012640 Membrane lipoprotein, lipid attachment site RK88_RS02400 IPR012338 Beta-lactamase/transpeptidase-like RK88_RS02400 IPR008756 Peptidase M56 RK88_RS02400 IPR001460 Penicillin-binding protein, transpeptidase RK88_RS02405 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS02405 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS02405 IPR005650 BlaI transcriptional regulatory family RK88_RS02410 IPR009057 Homeobox-like domain superfamily RK88_RS02410 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily RK88_RS02410 IPR006118 Recombinase, conserved site RK88_RS02410 IPR006120 Resolvase, HTH domain RK88_RS02410 IPR006119 Resolvase, N-terminal catalytic domain RK88_RS02415 IPR001584 Integrase, catalytic core RK88_RS02415 IPR038965 Transposase InsF-like RK88_RS02415 IPR012337 Ribonuclease H-like superfamily RK88_RS02415 IPR036397 Ribonuclease H superfamily RK88_RS02415 IPR009004 Transposase, Mu, C-terminal RK88_RS02415 IPR015378 Transposase-like, Mu, C-terminal RK88_RS02415 IPR009057 Homeobox-like domain superfamily RK88_RS02420 IPR003593 AAA+ ATPase domain RK88_RS02420 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS02425 IPR001279 Metallo-beta-lactamase RK88_RS02425 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RK88_RS02435 IPR008007 Peptidase M42 RK88_RS02435 IPR023367 Peptidase M42, domain 2 RK88_RS02440 IPR036249 Thioredoxin-like superfamily RK88_RS02440 IPR013766 Thioredoxin domain RK88_RS02445 IPR010838 Protein of unknown unction DUF1444 RK88_RS02450 IPR027855 Domain of unknown function DUF4479 RK88_RS02450 IPR012340 Nucleic acid-binding, OB-fold RK88_RS02450 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain RK88_RS02450 IPR002547 tRNA-binding domain RK88_RS02450 IPR037154 YtpR-like superfamily RK88_RS02455 IPR041027 FtsK alpha domain RK88_RS02455 IPR002543 FtsK domain RK88_RS02455 IPR018541 FtsK gamma domain RK88_RS02455 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS02455 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS02455 IPR003593 AAA+ ATPase domain RK88_RS02455 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS02460 IPR004101 Mur ligase, C-terminal RK88_RS02460 IPR036615 Mur ligase, C-terminal domain superfamily RK88_RS02460 IPR013221 Mur ligase, central RK88_RS02460 IPR005758 UDP-N-acetylmuramate--L-alanine ligase RK88_RS02460 IPR000713 Mur ligase, N-terminal catalytic domain RK88_RS02460 IPR036565 Mur-like, catalytic domain superfamily RK88_RS02465 IPR009293 Uncharacterised protein family UPF0478 RK88_RS02480 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 RK88_RS02480 IPR013785 Aldolase-type TIM barrel RK88_RS02480 IPR010954 Chorismate mutase, Firmicutes/Deinococcus RK88_RS02480 IPR036979 Chorismate mutase domain superfamily RK88_RS02480 IPR006218 DAHP synthetase I/KDSA RK88_RS02480 IPR002701 Chorismate mutase II, prokaryotic-type RK88_RS02490 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RK88_RS02490 IPR028082 Periplasmic binding protein-like I RK88_RS02490 IPR006377 Catabolite control protein A RK88_RS02490 IPR000843 LacI-type HTH domain RK88_RS02495 IPR023696 Ureohydrolase domain superfamily RK88_RS02495 IPR037138 Histone deacetylase domain superfamily RK88_RS02495 IPR000286 Histone deacetylase family RK88_RS02495 IPR003085 Acetoin utilization protein AcuC RK88_RS02495 IPR023801 Histone deacetylase domain RK88_RS02500 IPR024699 Acetoin utilization protein AcuA RK88_RS02500 IPR016181 Acyl-CoA N-acyltransferase RK88_RS02500 IPR000182 GNAT domain RK88_RS02505 IPR025110 AMP-binding enzyme, C-terminal domain RK88_RS02505 IPR020845 AMP-binding, conserved site RK88_RS02505 IPR000873 AMP-dependent synthetase/ligase RK88_RS02505 IPR042099 AMP-dependent synthetase-like superfamily RK88_RS02510 IPR000559 Formate-tetrahydrofolate ligase, FTHFS RK88_RS02510 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site RK88_RS02510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS02525 IPR036950 Penicillin binding protein transglycosylase domain RK88_RS02525 IPR023346 Lysozyme-like domain superfamily RK88_RS02525 IPR001264 Glycosyl transferase, family 51 RK88_RS02525 IPR012338 Beta-lactamase/transpeptidase-like RK88_RS02525 IPR001460 Penicillin-binding protein, transpeptidase RK88_RS02530 IPR002305 Aminoacyl-tRNA synthetase, class Ic RK88_RS02530 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS02530 IPR036986 RNA-binding S4 domain superfamily RK88_RS02530 IPR002942 RNA-binding S4 domain RK88_RS02530 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 RK88_RS02530 IPR024088 Tyrosine-tRNA ligase, bacterial-type RK88_RS02530 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RK88_RS02530 IPR002307 Tyrosine-tRNA ligase RK88_RS02535 IPR009003 Peptidase S1, PA clan RK88_RS02535 IPR036034 PDZ superfamily RK88_RS02535 IPR001478 PDZ domain RK88_RS02535 IPR001940 Peptidase S1C RK88_RS02540 IPR002123 Phospholipid/glycerol acyltransferase RK88_RS02540 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase RK88_RS02545 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component RK88_RS02545 IPR001996 Phosphotransferase system, IIB component, type 1 RK88_RS02545 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RK88_RS02545 IPR036878 Glucose permease domain IIB RK88_RS02545 IPR013013 Phosphotransferase system, EIIC component, type 1 RK88_RS02545 IPR003352 Phosphotransferase system, EIIC RK88_RS02560 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK88_RS02560 IPR029009 Allosteric substrate binding domain superfamily RK88_RS02560 IPR036291 NAD(P)-binding domain superfamily RK88_RS02560 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RK88_RS02560 IPR002912 ACT domain RK88_RS02560 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK88_RS02560 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RK88_RS02560 IPR006236 D-3-phosphoglycerate dehydrogenase RK88_RS02565 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS02565 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS02565 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RK88_RS02565 IPR000192 Aminotransferase class V domain RK88_RS02565 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase RK88_RS02565 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS02570 IPR003718 OsmC/Ohr family RK88_RS02570 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes RK88_RS02570 IPR015946 K homology domain-like, alpha/beta RK88_RS02570 IPR036102 OsmC/Ohr superfamily RK88_RS02575 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily RK88_RS02575 IPR030395 Glycerophosphodiester phosphodiesterase domain RK88_RS02585 IPR022801 Ribosomal protein S4/S9 RK88_RS02585 IPR001912 Ribosomal protein S4/S9, N-terminal RK88_RS02585 IPR005709 Ribosomal protein S4, bacterial-type RK88_RS02585 IPR018079 Ribosomal protein S4, conserved site RK88_RS02585 IPR002942 RNA-binding S4 domain RK88_RS02585 IPR036986 RNA-binding S4 domain superfamily RK88_RS02595 IPR003018 GAF domain RK88_RS02595 IPR000614 Free Met sulfoxide reductase conserved site RK88_RS02595 IPR029016 GAF-like domain superfamily RK88_RS02600 IPR010379 Septation ring formation regulator EzrA RK88_RS02610 IPR010240 Cysteine desulfurase IscS RK88_RS02610 IPR016454 Cysteine desulfurase RK88_RS02610 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS02610 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS02610 IPR000192 Aminotransferase class V domain RK88_RS02610 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RK88_RS02610 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS02615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS02615 IPR020536 Thil, AANH domain RK88_RS02615 IPR003720 tRNA sulfurtransferase ThiI RK88_RS02615 IPR004114 THUMP domain RK88_RS02620 IPR002781 Transmembrane protein TauE-like RK88_RS02625 IPR013740 Redoxin RK88_RS02625 IPR018219 Thiol peroxidase conserved site RK88_RS02625 IPR002065 Thiol peroxidase Tpx RK88_RS02625 IPR036249 Thioredoxin-like superfamily RK88_RS02625 IPR013766 Thioredoxin domain RK88_RS02630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS02630 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted RK88_RS02630 IPR003356 DNA methylase, adenine-specific RK88_RS02635 IPR000890 Aliphatic acid kinase, short-chain RK88_RS02635 IPR004372 Acetate/propionate kinase RK88_RS02635 IPR023865 Aliphatic acid kinase, short-chain, conserved site RK88_RS02640 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS02640 IPR006015 Universal stress protein A family RK88_RS02640 IPR006016 UspA RK88_RS02645 IPR036291 NAD(P)-binding domain superfamily RK88_RS02645 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 RK88_RS02645 IPR008141 Alanine dehydrogenase RK88_RS02645 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RK88_RS02645 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RK88_RS02645 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RK88_RS02655 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RK88_RS02655 IPR036005 Creatinase/aminopeptidase-like RK88_RS02655 IPR000994 Peptidase M24 RK88_RS02655 IPR000587 Creatinase, N-terminal RK88_RS02655 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RK88_RS02660 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RK88_RS02660 IPR022877 Protein of unknown funcion UPF0173 RK88_RS02660 IPR001279 Metallo-beta-lactamase RK88_RS02670 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS02670 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS02670 IPR000644 CBS domain RK88_RS02670 IPR010766 DRTGG RK88_RS02670 IPR029069 HotDog domain superfamily RK88_RS02670 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily RK88_RS02670 IPR000524 Transcription regulator HTH, GntR RK88_RS02670 IPR006683 Thioesterase domain RK88_RS02675 IPR038763 DHH phosphoesterase superfamily RK88_RS02675 IPR003156 DHHA1 domain RK88_RS02675 IPR001667 DDH domain RK88_RS02680 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain RK88_RS02680 IPR029460 DNA polymerase, helix-hairpin-helix motif RK88_RS02680 IPR016195 Polymerase/histidinol phosphatase-like RK88_RS02680 IPR003141 Polymerase/histidinol phosphatase, N-terminal RK88_RS02680 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain RK88_RS02680 IPR004013 PHP domain RK88_RS02680 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RK88_RS02680 IPR040982 DNA polymerase III alpha subunit finger domain RK88_RS02680 IPR004805 DNA polymerase III, alpha subunit RK88_RS02685 IPR012302 Malic enzyme, NAD-binding RK88_RS02685 IPR001891 Malic oxidoreductase RK88_RS02685 IPR036291 NAD(P)-binding domain superfamily RK88_RS02685 IPR012301 Malic enzyme, N-terminal domain RK88_RS02685 IPR015884 Malic enzyme, conserved site RK88_RS02685 IPR037062 Malic enzyme, N-terminal domain superfamily RK88_RS02690 IPR034733 Acetyl-CoA carboxylase RK88_RS02690 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit RK88_RS02690 IPR029045 ClpP/crotonase-like domain superfamily RK88_RS02690 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal RK88_RS02690 IPR041010 Acetyl-coA carboxylase zinc finger domain RK88_RS02695 IPR001095 Acetyl-CoA carboxylase, alpha subunit RK88_RS02695 IPR029045 ClpP/crotonase-like domain superfamily RK88_RS02695 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal RK88_RS02700 IPR035966 Phosphofructokinase superfamily RK88_RS02700 IPR000023 Phosphofructokinase domain RK88_RS02700 IPR022953 ATP-dependent 6-phosphofructokinase RK88_RS02700 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type RK88_RS02700 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic RK88_RS02700 IPR015912 Phosphofructokinase, conserved site RK88_RS02705 IPR015795 Pyruvate kinase, C-terminal RK88_RS02705 IPR011037 Pyruvate kinase-like, insert domain superfamily RK88_RS02705 IPR036918 Pyruvate kinase, C-terminal domain superfamily RK88_RS02705 IPR015806 Pyruvate kinase, insert domain superfamily RK88_RS02705 IPR036637 Phosphohistidine domain superfamily RK88_RS02705 IPR040442 Pyruvate kinase-like domain superfamily RK88_RS02705 IPR008279 PEP-utilising enzyme, mobile domain RK88_RS02705 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RK88_RS02705 IPR015793 Pyruvate kinase, barrel RK88_RS02705 IPR001697 Pyruvate kinase RK88_RS02710 IPR004841 Amino acid permease/ SLC12A domain RK88_RS02710 IPR004840 Amino acid permease, conserved site RK88_RS02715 IPR011278 2-methylcitrate synthase/citrate synthase type I RK88_RS02715 IPR002020 Citrate synthase RK88_RS02715 IPR016142 Citrate synthase-like, large alpha subdomain RK88_RS02715 IPR016143 Citrate synthase-like, small alpha subdomain RK88_RS02715 IPR019810 Citrate synthase active site RK88_RS02715 IPR024176 Citrate synthase, bacterial-type RK88_RS02715 IPR036969 Citrate synthase superfamily RK88_RS02720 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic RK88_RS02720 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site RK88_RS02720 IPR024084 Isopropylmalate dehydrogenase-like domain RK88_RS02730 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS02730 IPR039420 Transcriptional regulatory protein WalR-like RK88_RS02730 IPR001789 Signal transduction response regulator, receiver domain RK88_RS02730 IPR016032 Signal transduction response regulator, C-terminal effector RK88_RS02730 IPR001867 OmpR/PhoB-type DNA-binding domain RK88_RS02730 IPR011006 CheY-like superfamily RK88_RS02735 IPR013767 PAS fold RK88_RS02735 IPR035965 PAS domain superfamily RK88_RS02735 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS02735 IPR031967 PhoR, single Cache-like domain RK88_RS02735 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS02735 IPR000014 PAS domain RK88_RS02735 IPR005467 Histidine kinase domain RK88_RS02735 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RK88_RS02735 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RK88_RS02735 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RK88_RS02745 IPR036279 5'-3' exonuclease, C-terminal domain superfamily RK88_RS02745 IPR002562 3'-5' exonuclease domain RK88_RS02745 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RK88_RS02745 IPR002421 5'-3' exonuclease, N-terminal RK88_RS02745 IPR036397 Ribonuclease H superfamily RK88_RS02745 IPR029060 PIN-like domain superfamily RK88_RS02745 IPR008918 Helix-hairpin-helix motif, class 2 RK88_RS02745 IPR002298 DNA polymerase A RK88_RS02745 IPR020045 DNA polymerase I-like, H3TH domain RK88_RS02745 IPR001098 DNA-directed DNA polymerase, family A, palm domain RK88_RS02745 IPR019760 DNA-directed DNA polymerase, family A, conserved site RK88_RS02745 IPR012337 Ribonuclease H-like superfamily RK88_RS02745 IPR018320 DNA polymerase 1 RK88_RS02750 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain RK88_RS02750 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding RK88_RS02750 IPR010663 Zinc finger, FPG/IleRS-type RK88_RS02750 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type RK88_RS02750 IPR010979 Ribosomal protein S13-like, H2TH RK88_RS02750 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site RK88_RS02750 IPR035937 MutM-like, N-terminal RK88_RS02750 IPR020629 Formamidopyrimidine-DNA glycosylase RK88_RS02755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS02755 IPR001977 Dephospho-CoA kinase RK88_RS02760 IPR036291 NAD(P)-binding domain superfamily RK88_RS02760 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RK88_RS02760 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RK88_RS02760 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RK88_RS02760 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RK88_RS02760 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RK88_RS02765 IPR003796 Ribonucleotide reductase regulator NrdR-like RK88_RS02765 IPR005144 ATP-cone domain RK88_RS02775 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS02775 IPR002611 IstB-like ATP-binding protein RK88_RS02775 IPR009928 Primosomal DnaI, N-terminal RK88_RS02775 IPR003593 AAA+ ATPase domain RK88_RS02785 IPR036621 Anticodon-binding domain superfamily RK88_RS02785 IPR006195 Aminoacyl-tRNA synthetase, class II RK88_RS02785 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RK88_RS02785 IPR012675 Beta-grasp domain superfamily RK88_RS02785 IPR004095 TGS RK88_RS02785 IPR012676 TGS-like RK88_RS02785 IPR002320 Threonine-tRNA ligase, class IIa RK88_RS02785 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily RK88_RS02785 IPR004154 Anticodon-binding RK88_RS02785 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RK88_RS02785 IPR033728 Threonine-tRNA ligase catalytic core domain RK88_RS02790 IPR004841 Amino acid permease/ SLC12A domain RK88_RS02795 IPR019814 Translation initiation factor 3, N-terminal RK88_RS02795 IPR019815 Translation initiation factor 3, C-terminal RK88_RS02795 IPR001288 Translation initiation factor 3 RK88_RS02795 IPR019813 Translation initiation factor 3, conserved site RK88_RS02795 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily RK88_RS02795 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily RK88_RS02800 IPR018265 Ribosomal protein L35, conserved site RK88_RS02800 IPR001706 Ribosomal protein L35, non-mitochondrial RK88_RS02800 IPR021137 Ribosomal protein L35 RK88_RS02800 IPR037229 Ribosomal protein L35 superfamily RK88_RS02805 IPR035566 Ribosomal protein L20, C-terminal RK88_RS02805 IPR005813 Ribosomal protein L20 RK88_RS02815 IPR015797 NUDIX hydrolase-like domain superfamily RK88_RS02830 IPR008881 Trigger factor, ribosome-binding, bacterial RK88_RS02830 IPR005215 Trigger factor RK88_RS02830 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RK88_RS02830 IPR037041 Trigger factor, C-terminal domain superfamily RK88_RS02830 IPR036611 Trigger factor ribosome-binding domain superfamily RK88_RS02830 IPR008880 Trigger factor, C-terminal RK88_RS02830 IPR027304 Trigger factor/SurA domain superfamily RK88_RS02835 IPR004487 Clp protease, ATP-binding subunit ClpX RK88_RS02835 IPR019489 Clp ATPase, C-terminal RK88_RS02835 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS02835 IPR010603 Zinc finger, ClpX C4-type RK88_RS02835 IPR003959 ATPase, AAA-type, core RK88_RS02835 IPR003593 AAA+ ATPase domain RK88_RS02835 IPR038366 Zinc finger, ClpX C4-type superfamily RK88_RS02840 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS02840 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC RK88_RS02840 IPR030393 EngB-type guanine nucleotide-binding (G) domain RK88_RS02840 IPR006073 GTP binding domain RK88_RS02845 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RK88_RS02845 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily RK88_RS02845 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily RK88_RS02845 IPR036291 NAD(P)-binding domain superfamily RK88_RS02845 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain RK88_RS02845 IPR018214 Glutamyl-tRNA reductase, conserved site RK88_RS02845 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase RK88_RS02845 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal RK88_RS02850 IPR002541 Cytochrome c assembly protein RK88_RS02855 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily RK88_RS02855 IPR000860 Porphobilinogen deaminase RK88_RS02855 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site RK88_RS02855 IPR022417 Porphobilinogen deaminase, N-terminal RK88_RS02855 IPR022418 Porphobilinogen deaminase, C-terminal RK88_RS02865 IPR001731 Delta-aminolevulinic acid dehydratase RK88_RS02865 IPR030656 Delta-aminolevulinic acid dehydratase, active site RK88_RS02865 IPR013785 Aldolase-type TIM barrel RK88_RS02870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS02870 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS02870 IPR005814 Aminotransferase class-III RK88_RS02870 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase RK88_RS02870 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS02885 IPR011257 DNA glycosylase RK88_RS02885 IPR005019 Methyladenine glycosylase RK88_RS02885 IPR004597 DNA-3-methyladenine glycosylase I RK88_RS02890 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm RK88_RS02890 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RK88_RS02890 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RK88_RS02890 IPR002300 Aminoacyl-tRNA synthetase, class Ia RK88_RS02890 IPR033705 Valyl tRNA synthetase, anticodon-binding domain RK88_RS02890 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RK88_RS02890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS02890 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RK88_RS02890 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RK88_RS02890 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily RK88_RS02890 IPR002303 Valine-tRNA ligase RK88_RS02895 IPR001645 Folylpolyglutamate synthetase RK88_RS02895 IPR018109 Folylpolyglutamate synthetase, conserved site RK88_RS02895 IPR036565 Mur-like, catalytic domain superfamily RK88_RS02895 IPR004101 Mur ligase, C-terminal RK88_RS02895 IPR036615 Mur ligase, C-terminal domain superfamily RK88_RS02895 IPR013221 Mur ligase, central RK88_RS02905 IPR014032 Peptidase A24A, prepilin type IV, bacterial RK88_RS02905 IPR000045 Prepilin type IV endopeptidase, peptidase domain RK88_RS02905 IPR010627 Peptidase A24A, N-terminal RK88_RS02910 IPR010994 RuvA domain 2-like RK88_RS02910 IPR001405 Uncharacterised protein family UPF0758 RK88_RS02910 IPR020891 Uncharacterised protein family UPF0758, conserved site RK88_RS02910 IPR037518 MPN domain RK88_RS02910 IPR025657 RadC-like JAB domain RK88_RS02945 IPR036164 L21-like superfamily RK88_RS02945 IPR028909 Ribosomal protein L21-like RK88_RS02945 IPR001787 Ribosomal protein L21 RK88_RS02950 IPR036764 Cysteine protease Prp superfamily RK88_RS02950 IPR007422 Cysteine protease Prp RK88_RS02955 IPR018261 Ribosomal protein L27, conserved site RK88_RS02955 IPR001684 Ribosomal protein L27 RK88_RS02960 IPR015349 GTP-binding protein OBG, C-terminal RK88_RS02960 IPR006074 GTP1/OBG, conserved site RK88_RS02960 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily RK88_RS02960 IPR014100 GTP-binding protein Obg/CgtA RK88_RS02960 IPR006073 GTP binding domain RK88_RS02960 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS02960 IPR035101 GTP-binding protein, Obg-type RK88_RS02960 IPR031167 OBG-type guanine nucleotide-binding (G) domain RK88_RS02960 IPR006169 GTP1/OBG domain RK88_RS02960 IPR036726 GTP1/OBG domain superfamily RK88_RS02965 IPR002912 ACT domain RK88_RS02965 IPR008310 UPF0735 ACT domain-containing protein RK88_RS02970 IPR036267 RuvA, C-terminal domain superfamily RK88_RS02970 IPR011114 Holliday junction DNA helicase RuvA, C-terminal RK88_RS02970 IPR010994 RuvA domain 2-like RK88_RS02970 IPR000085 Bacterial DNA recombination protein RuvA RK88_RS02970 IPR012340 Nucleic acid-binding, OB-fold RK88_RS02970 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RK88_RS02970 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial RK88_RS02975 IPR008823 RuvB C-terminal winged helix domain RK88_RS02975 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS02975 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS02975 IPR041445 RuvB, AAA lid domain RK88_RS02975 IPR003593 AAA+ ATPase domain RK88_RS02975 IPR008824 RuvB-like P-loop domain RK88_RS02975 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS02975 IPR004605 DNA helicase, Holliday junction RuvB-type RK88_RS02980 IPR042118 QueA, domain 1 RK88_RS02980 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily RK88_RS02980 IPR042119 QueA, domain 2 RK88_RS02980 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA RK88_RS02985 IPR036511 Queuine tRNA-ribosyltransferase-like RK88_RS02985 IPR002616 tRNA-guanine(15) transglycosylase-like RK88_RS02985 IPR004803 tRNA-guanine transglycosylase RK88_RS02990 IPR003849 Preprotein translocase YajC RK88_RS02995 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RK88_RS02995 IPR005665 Protein-export membrane protein SecF, bacterial RK88_RS02995 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RK88_RS02995 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RK88_RS02995 IPR005791 Protein translocase subunit SecD RK88_RS03000 IPR001667 DDH domain RK88_RS03000 IPR038763 DHH phosphoesterase superfamily RK88_RS03000 IPR003156 DHHA1 domain RK88_RS03000 IPR041122 RecJ, OB domain RK88_RS03000 IPR004610 Bacterial RecJ exonuclease RK88_RS03000 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal RK88_RS03005 IPR005764 Adenine phosphoribosyl transferase RK88_RS03005 IPR000836 Phosphoribosyltransferase domain RK88_RS03005 IPR029057 Phosphoribosyltransferase-like RK88_RS03010 IPR007685 RelA/SpoT RK88_RS03010 IPR004811 RelA/SpoT family RK88_RS03010 IPR012675 Beta-grasp domain superfamily RK88_RS03010 IPR002912 ACT domain RK88_RS03010 IPR003607 HD/PDEase domain RK88_RS03010 IPR004095 TGS RK88_RS03010 IPR012676 TGS-like RK88_RS03010 IPR033655 RelA, TGS domain RK88_RS03015 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily RK88_RS03015 IPR003732 D-aminoacyl-tRNA deacylase DTD RK88_RS03020 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain RK88_RS03020 IPR017273 Probable cell wall amidase LytH RK88_RS03020 IPR003646 SH3-like domain, bacterial-type RK88_RS03025 IPR004154 Anticodon-binding RK88_RS03025 IPR006195 Aminoacyl-tRNA synthetase, class II RK88_RS03025 IPR015807 Histidine-tRNA ligase RK88_RS03025 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain RK88_RS03025 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit RK88_RS03025 IPR036621 Anticodon-binding domain superfamily RK88_RS03030 IPR029351 GAD domain RK88_RS03030 IPR012340 Nucleic acid-binding, OB-fold RK88_RS03030 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RK88_RS03030 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RK88_RS03030 IPR004524 Aspartate-tRNA ligase, type 1 RK88_RS03030 IPR006195 Aminoacyl-tRNA synthetase, class II RK88_RS03030 IPR004115 GAD-like domain superfamily RK88_RS03030 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RK88_RS03045 IPR035985 Ubiquitin-activating enzyme RK88_RS03045 IPR000594 THIF-type NAD/FAD binding fold RK88_RS03050 IPR032423 AAA C-terminal domain RK88_RS03050 IPR021886 MgsA AAA+ ATPase C-terminal RK88_RS03050 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03050 IPR008824 RuvB-like P-loop domain RK88_RS03050 IPR003593 AAA+ ATPase domain RK88_RS03050 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RK88_RS03055 IPR000944 Transcription regulator Rrf2-type RK88_RS03055 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS03055 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS03055 IPR030489 Transcription regulator Rrf2-type, conserved site RK88_RS03060 IPR036629 YjbJ superfamily RK88_RS03060 IPR008462 CsbD-like domain RK88_RS03070 IPR036661 Luciferase-like domain superfamily RK88_RS03070 IPR011251 Luciferase-like domain RK88_RS03070 IPR019949 Luciferase family oxidoreductase, group 1 RK88_RS03075 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RK88_RS03075 IPR000192 Aminotransferase class V domain RK88_RS03075 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS03075 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS03075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS03075 IPR016454 Cysteine desulfurase RK88_RS03080 IPR023382 Adenine nucleotide alpha hydrolase-like domains RK88_RS03080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS03080 IPR004506 tRNA-specific 2-thiouridylase RK88_RS03090 IPR029493 RecD helicase-like helix-hairpin-helix domain RK88_RS03090 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03090 IPR041451 RecD-like DNA helicase, SH3 domain RK88_RS03090 IPR027785 UvrD-like helicase C-terminal domain RK88_RS03090 IPR006345 RecD-like DNA helicase RK88_RS03090 IPR003593 AAA+ ATPase domain RK88_RS03095 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria RK88_RS03095 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal RK88_RS03095 IPR012947 Threonyl/alanyl tRNA synthetase, SAD RK88_RS03095 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily RK88_RS03095 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain RK88_RS03095 IPR003156 DHHA1 domain RK88_RS03095 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily RK88_RS03095 IPR009000 Translation protein, beta-barrel domain superfamily RK88_RS03095 IPR002318 Alanine-tRNA ligase, class IIc RK88_RS03100 IPR009309 IreB regulatory phosphoprotein RK88_RS03105 IPR012337 Ribonuclease H-like superfamily RK88_RS03105 IPR005227 Putative pre-16S rRNA nuclease RK88_RS03105 IPR006641 YqgF/RNase H-like domain RK88_RS03105 IPR037027 YqgF/RNase H-like domain superfamily RK88_RS03110 IPR009711 Uncharacterised protein family UPF0473 RK88_RS03130 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03130 IPR000764 Uridine kinase-like RK88_RS03130 IPR006083 Phosphoribulokinase/uridine kinase RK88_RS03130 IPR026008 Uridine kinase RK88_RS03135 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal RK88_RS03135 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily RK88_RS03135 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal RK88_RS03135 IPR023459 Transcription elongation factor GreA/GreB family RK88_RS03135 IPR018151 Transcription elongation factor, GreA/GreB, conserved site RK88_RS03135 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily RK88_RS03135 IPR028624 Transcription elongation factor GreA/GreB RK88_RS03135 IPR006359 Transcription elongation factor GreA RK88_RS03140 IPR003833 Carboxyltransferase domain, subdomain C and D RK88_RS03140 IPR010016 KipI family RK88_RS03140 IPR029000 Cyclophilin-like domain superfamily RK88_RS03145 IPR003778 Carboxyltransferase domain, subdomain A and B RK88_RS03145 IPR029000 Cyclophilin-like domain superfamily RK88_RS03150 IPR000089 Biotin/lipoyl attachment RK88_RS03150 IPR001249 Acetyl-CoA biotin carboxyl carrier RK88_RS03150 IPR001882 Biotin-binding site RK88_RS03150 IPR011053 Single hybrid motif RK88_RS03155 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RK88_RS03155 IPR016185 Pre-ATP-grasp domain superfamily RK88_RS03155 IPR011054 Rudiment single hybrid motif RK88_RS03155 IPR005482 Biotin carboxylase, C-terminal RK88_RS03155 IPR011764 Biotin carboxylation domain RK88_RS03155 IPR005481 Biotin carboxylase-like, N-terminal domain RK88_RS03155 IPR011761 ATP-grasp fold RK88_RS03155 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RK88_RS03160 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RK88_RS03160 IPR005501 LamB/YcsF/PxpA-like RK88_RS03165 IPR001046 NRAMP family RK88_RS03200 IPR035994 Nucleoside phosphorylase superfamily RK88_RS03200 IPR000845 Nucleoside phosphorylase domain RK88_RS03200 IPR010049 MTA/SAH nucleosidase RK88_RS03205 IPR006439 HAD hydrolase, subfamily IA RK88_RS03205 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RK88_RS03205 IPR023214 HAD superfamily RK88_RS03205 IPR036412 HAD-like superfamily RK88_RS03205 IPR010021 HAD-superfamily phosphatase, YqeG-like RK88_RS03210 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03210 IPR006073 GTP binding domain RK88_RS03210 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH RK88_RS03210 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain RK88_RS03215 IPR011342 Shikimate dehydrogenase RK88_RS03215 IPR041121 SDH, C-terminal RK88_RS03215 IPR036291 NAD(P)-binding domain superfamily RK88_RS03215 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal RK88_RS03215 IPR022893 Shikimate dehydrogenase family RK88_RS03215 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RK88_RS03220 IPR035920 YhbY-like superfamily RK88_RS03220 IPR017924 RNA-binding protein YhbY RK88_RS03220 IPR001890 RNA-binding, CRM domain RK88_RS03225 IPR004821 Cytidyltransferase-like domain RK88_RS03225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS03225 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase RK88_RS03230 IPR006674 HD domain RK88_RS03230 IPR003607 HD/PDEase domain RK88_RS03230 IPR005249 Conserved hypothetical protein CHP00488 RK88_RS03235 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RK88_RS03240 IPR041698 Methyltransferase domain 25 RK88_RS03240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS03250 IPR016192 APOBEC/CMP deaminase, zinc-binding RK88_RS03250 IPR015517 Deoxycytidylate deaminase-related RK88_RS03250 IPR035105 Deoxycytidylate deaminase domain RK88_RS03250 IPR016193 Cytidine deaminase-like RK88_RS03250 IPR013404 Competence operon E, ComEB RK88_RS03250 IPR002125 Cytidine and deoxycytidylate deaminase domain RK88_RS03255 IPR004797 Competence protein ComEC/Rec2 RK88_RS03255 IPR004477 ComEC/Rec2-related protein RK88_RS03255 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RK88_RS03255 IPR001279 Metallo-beta-lactamase RK88_RS03255 IPR035681 ComA-like, MBL domain RK88_RS03255 IPR025405 Domain of unknown function DUF4131 RK88_RS03260 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RK88_RS03260 IPR010372 DNA polymerase III delta, N-terminal RK88_RS03260 IPR005790 DNA polymerase III, delta subunit RK88_RS03260 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03265 IPR036510 Ribosomal protein S20 superfamily RK88_RS03265 IPR002583 Ribosomal protein S20 RK88_RS03270 IPR009000 Translation protein, beta-barrel domain superfamily RK88_RS03270 IPR000640 Elongation factor EFG, domain V-like RK88_RS03270 IPR000795 Transcription factor, GTP-binding domain RK88_RS03270 IPR035647 EF-G domain III/V-like RK88_RS03270 IPR005225 Small GTP-binding protein domain RK88_RS03270 IPR013842 GTP-binding protein LepA, C-terminal RK88_RS03270 IPR006297 Elongation factor 4 RK88_RS03270 IPR038363 LepA, C-terminal domain superfamily RK88_RS03270 IPR031157 Tr-type G domain, conserved site RK88_RS03270 IPR004161 Translation elongation factor EFTu-like, domain 2 RK88_RS03270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03270 IPR035654 Elongation factor 4, domain IV RK88_RS03280 IPR004559 Heme chaperone HemW-like RK88_RS03280 IPR034505 Anaerobic coproporphyrinogen-III oxidase RK88_RS03280 IPR006638 Elp3/MiaB/NifB RK88_RS03280 IPR010723 HemN, C-terminal RK88_RS03280 IPR007197 Radical SAM RK88_RS03280 IPR023404 Radical SAM, alpha/beta horseshoe RK88_RS03285 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily RK88_RS03285 IPR002571 Heat-inducible transcription repressor HrcA RK88_RS03285 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS03285 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal RK88_RS03285 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS03285 IPR029016 GAF-like domain superfamily RK88_RS03290 IPR000740 GrpE nucleotide exchange factor RK88_RS03290 IPR013805 GrpE nucleotide exchange factor, coiled-coil RK88_RS03290 IPR009012 GrpE nucleotide exchange factor, head RK88_RS03295 IPR012725 Chaperone DnaK RK88_RS03295 IPR018181 Heat shock protein 70, conserved site RK88_RS03295 IPR013126 Heat shock protein 70 family RK88_RS03295 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RK88_RS03295 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily RK88_RS03300 IPR012724 Chaperone DnaJ RK88_RS03300 IPR001305 Heat shock protein DnaJ, cysteine-rich domain RK88_RS03300 IPR008971 HSP40/DnaJ peptide-binding RK88_RS03300 IPR001623 DnaJ domain RK88_RS03300 IPR002939 Chaperone DnaJ, C-terminal RK88_RS03300 IPR018253 DnaJ domain, conserved site RK88_RS03300 IPR036869 Chaperone J-domain superfamily RK88_RS03300 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily RK88_RS03305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS03305 IPR004498 Ribosomal protein L11 methyltransferase RK88_RS03310 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK88_RS03310 IPR006700 Ribosomal RNA small subunit methyltransferase E RK88_RS03310 IPR029028 Alpha/beta knot methyltransferases RK88_RS03310 IPR015947 PUA-like superfamily RK88_RS03315 IPR013848 Methylthiotransferase, N-terminal RK88_RS03315 IPR006638 Elp3/MiaB/NifB RK88_RS03315 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase RK88_RS03315 IPR038135 Methylthiotransferase, N-terminal domain superfamily RK88_RS03315 IPR023404 Radical SAM, alpha/beta horseshoe RK88_RS03315 IPR002792 TRAM domain RK88_RS03315 IPR007197 Radical SAM RK88_RS03315 IPR006467 MiaB-like tRNA modifying enzyme RK88_RS03315 IPR005839 Methylthiotransferase RK88_RS03315 IPR020612 Methylthiotransferase, conserved site RK88_RS03320 IPR001911 Ribosomal protein S21 RK88_RS03320 IPR018278 Ribosomal protein S21, conserved site RK88_RS03320 IPR038380 Ribosomal protein S21 superfamily RK88_RS03325 IPR029045 ClpP/crotonase-like domain superfamily RK88_RS03325 IPR002810 NfeD-like, C-terminal domain RK88_RS03325 IPR002825 Peptidase S49, serine-peptidase prokaryotes RK88_RS03330 IPR022853 Uncharacterised protein family YdfA-immunity RK88_RS03340 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03340 IPR003714 PhoH-like protein RK88_RS03345 IPR023091 Metalloprotease catalytic domain superfamily, predicted RK88_RS03345 IPR002036 Endoribonuclease YbeY RK88_RS03345 IPR020549 Endoribonuclease YbeY, conserved site RK88_RS03355 IPR016193 Cytidine deaminase-like RK88_RS03355 IPR006262 Cytidine deaminase, homotetrameric RK88_RS03355 IPR016192 APOBEC/CMP deaminase, zinc-binding RK88_RS03355 IPR002125 Cytidine and deoxycytidylate deaminase domain RK88_RS03360 IPR005225 Small GTP-binding protein domain RK88_RS03360 IPR030388 Era-type guanine nucleotide-binding (G) domain RK88_RS03360 IPR005662 GTP-binding protein Era RK88_RS03360 IPR006073 GTP binding domain RK88_RS03360 IPR015946 K homology domain-like, alpha/beta RK88_RS03360 IPR004044 K Homology domain, type 2 RK88_RS03360 IPR009019 K homology domain superfamily, prokaryotic type RK88_RS03360 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03365 IPR037278 ARFGAP/RecO-like zinc finger RK88_RS03365 IPR022572 DNA replication/recombination mediator RecO, N-terminal RK88_RS03365 IPR012340 Nucleic acid-binding, OB-fold RK88_RS03365 IPR003717 Recombination protein O, RecO RK88_RS03370 IPR022961 Glycine-tRNA ligase, bacterial RK88_RS03370 IPR004154 Anticodon-binding RK88_RS03370 IPR006195 Aminoacyl-tRNA synthetase, class II RK88_RS03370 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RK88_RS03370 IPR002315 Glycyl-tRNA synthetase RK88_RS03370 IPR033731 Glycyl-tRNA synthetase-like core domain RK88_RS03370 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 RK88_RS03370 IPR036621 Anticodon-binding domain superfamily RK88_RS03375 IPR013196 Helix-turn-helix, type 11 RK88_RS03375 IPR000644 CBS domain RK88_RS03375 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS03375 IPR016842 Protein of unknown function UCP026546, HtH-CBS RK88_RS03375 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS03380 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein RK88_RS03380 IPR005177 Bifunctional kinase-pyrophosphorylase RK88_RS03385 IPR006295 DNA primase, DnaG RK88_RS03385 IPR013264 DNA primase, catalytic core, N-terminal RK88_RS03385 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RK88_RS03385 IPR007693 DNA helicase, DnaB-like, N-terminal RK88_RS03385 IPR036977 DNA Primase, CHC2-type zinc finger RK88_RS03385 IPR030846 DNA primase DnaG, bacteria RK88_RS03385 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily RK88_RS03385 IPR034151 Bacterial DnaG primase, TOPRIM domain RK88_RS03385 IPR006171 TOPRIM domain RK88_RS03385 IPR002694 Zinc finger, CHC2-type RK88_RS03385 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily RK88_RS03390 IPR007624 RNA polymerase sigma-70 region 3 RK88_RS03390 IPR007627 RNA polymerase sigma-70 region 2 RK88_RS03390 IPR013325 RNA polymerase sigma factor, region 2 RK88_RS03390 IPR007127 RNA polymerase sigma factor 70, region 1.1 RK88_RS03390 IPR028630 RNA polymerase sigma factor RpoD RK88_RS03390 IPR042189 Sigma-70 factor, region 1.1 superfamily RK88_RS03390 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS03390 IPR014284 RNA polymerase sigma-70 like domain RK88_RS03390 IPR009042 RNA polymerase sigma-70 region 1.2 RK88_RS03390 IPR000943 RNA polymerase sigma-70 RK88_RS03390 IPR007630 RNA polymerase sigma-70 region 4 RK88_RS03390 IPR013324 RNA polymerase sigma factor, region 3/4-like RK88_RS03390 IPR012760 RNA polymerase sigma factor RpoD, C-terminal RK88_RS03395 IPR006901 tRNA methyltransferase TrmK RK88_RS03395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS03400 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RK88_RS03400 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily RK88_RS03400 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RK88_RS03400 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria RK88_RS03405 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK88_RS03405 IPR014014 RNA helicase, DEAD-box type, Q motif RK88_RS03405 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03405 IPR001650 Helicase, C-terminal RK88_RS03405 IPR011545 DEAD/DEAH box helicase domain RK88_RS03405 IPR030881 DEAD-box ATP-dependent RNA helicase CshB RK88_RS03410 IPR036237 Xylose isomerase-like superfamily RK88_RS03410 IPR018246 AP endonuclease 2, zinc binding site RK88_RS03410 IPR013022 Xylose isomerase-like, TIM barrel domain RK88_RS03410 IPR001719 AP endonuclease 2 RK88_RS03415 IPR003439 ABC transporter-like RK88_RS03415 IPR003593 AAA+ ATPase domain RK88_RS03415 IPR017871 ABC transporter, conserved site RK88_RS03415 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03420 IPR037294 ABC transporter, BtuC-like RK88_RS03420 IPR001626 ABC transporter, TroCD-like RK88_RS03425 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS03425 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS03425 IPR002481 Ferric-uptake regulator RK88_RS03430 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily RK88_RS03430 IPR001189 Manganese/iron superoxide dismutase RK88_RS03430 IPR019833 Manganese/iron superoxide dismutase, binding site RK88_RS03430 IPR019832 Manganese/iron superoxide dismutase, C-terminal RK88_RS03430 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily RK88_RS03430 IPR019831 Manganese/iron superoxide dismutase, N-terminal RK88_RS03440 IPR038584 Ribosomal protein L33 superfamily RK88_RS03440 IPR001705 Ribosomal protein L33 RK88_RS03440 IPR011332 Zinc-binding ribosomal protein RK88_RS03440 IPR018264 Ribosomal protein L33, conserved site RK88_RS03445 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily RK88_RS03445 IPR037171 NagB/RpiA transferase-like RK88_RS03445 IPR002698 5-formyltetrahydrofolate cyclo-ligase RK88_RS03455 IPR009256 Protein of unknown function DUF910 RK88_RS03455 IPR023164 YqgQ-like superfamily RK88_RS03460 IPR000600 ROK family RK88_RS03460 IPR004654 Glucokinase ROK RK88_RS03465 IPR029756 MTH1187/YkoF-like RK88_RS03465 IPR002767 Thiamine-binding protein RK88_RS03470 IPR001279 Metallo-beta-lactamase RK88_RS03470 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RK88_RS03475 IPR001482 Type II/IV secretion system protein RK88_RS03475 IPR003593 AAA+ ATPase domain RK88_RS03475 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03480 IPR018076 Type II secretion system F domain RK88_RS03480 IPR003004 GspF/PilC family RK88_RS03480 IPR042094 Type II secretion system F domain superfamily RK88_RS03480 IPR001992 Type II secretion system conserved site RK88_RS03485 IPR000983 Bacterial general secretion pathway protein G-type pilin RK88_RS03485 IPR012902 Prokaryotic N-terminal methylation site RK88_RS03485 IPR016940 ComG operon protein C RK88_RS03510 IPR000623 Shikimate kinase/Threonine synthase-like 1 RK88_RS03510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03510 IPR031322 Shikimate kinase/gluconokinase RK88_RS03510 IPR023000 Shikimate kinase, conserved site RK88_RS03515 IPR022903 Glycine cleavage system T protein, bacteria RK88_RS03515 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RK88_RS03515 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal RK88_RS03515 IPR006222 Aminomethyltransferase, folate-binding domain RK88_RS03515 IPR028896 Aminomethyltransferase-like RK88_RS03515 IPR006223 Glycine cleavage system T protein RK88_RS03515 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain RK88_RS03520 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 RK88_RS03520 IPR020581 Glycine cleavage system P protein RK88_RS03520 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS03520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS03520 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS03525 IPR020581 Glycine cleavage system P protein RK88_RS03525 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS03525 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS03525 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS03525 IPR000192 Aminotransferase class V domain RK88_RS03525 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 RK88_RS03530 IPR001763 Rhodanese-like domain RK88_RS03530 IPR036873 Rhodanese-like domain superfamily RK88_RS03535 IPR024898 Octanoyltransferase LipM RK88_RS03535 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RK88_RS03550 IPR036005 Creatinase/aminopeptidase-like RK88_RS03550 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RK88_RS03550 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RK88_RS03550 IPR001714 Peptidase M24, methionine aminopeptidase RK88_RS03550 IPR000994 Peptidase M24 RK88_RS03550 IPR000587 Creatinase, N-terminal RK88_RS03555 IPR013852 Translation elongation factor P/YeiP, conserved site RK88_RS03555 IPR011768 Translation elongation factor P RK88_RS03555 IPR008991 Translation protein SH3-like domain superfamily RK88_RS03555 IPR001059 Translation elongation factor P/YeiP, central RK88_RS03555 IPR015365 Elongation factor P, C-terminal RK88_RS03555 IPR012340 Nucleic acid-binding, OB-fold RK88_RS03555 IPR014722 Ribosomal protein L2, domain 2 RK88_RS03555 IPR013185 Translation elongation factor, KOW-like RK88_RS03555 IPR020599 Translation elongation factor P/YeiP RK88_RS03560 IPR001249 Acetyl-CoA biotin carboxyl carrier RK88_RS03560 IPR000089 Biotin/lipoyl attachment RK88_RS03560 IPR001882 Biotin-binding site RK88_RS03560 IPR011053 Single hybrid motif RK88_RS03565 IPR011054 Rudiment single hybrid motif RK88_RS03565 IPR016185 Pre-ATP-grasp domain superfamily RK88_RS03565 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RK88_RS03565 IPR005482 Biotin carboxylase, C-terminal RK88_RS03565 IPR011764 Biotin carboxylation domain RK88_RS03565 IPR005481 Biotin carboxylase-like, N-terminal domain RK88_RS03565 IPR011761 ATP-grasp fold RK88_RS03565 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase RK88_RS03570 IPR005531 Alkaline shock protein Asp23 RK88_RS03575 IPR035926 NusB-like superfamily RK88_RS03575 IPR011605 NusB antitermination factor RK88_RS03575 IPR006027 NusB/RsmB/TIM44 RK88_RS03580 IPR003753 Exonuclease VII, large subunit RK88_RS03580 IPR020579 Exonuclease VII, large subunit, C-terminal RK88_RS03580 IPR025824 OB-fold nucleic acid binding domain RK88_RS03585 IPR037004 Exonuclease VII, small subunit superfamily RK88_RS03585 IPR003761 Exonuclease VII, small subunit RK88_RS03590 IPR033749 Polyprenyl synthetase, conserved site RK88_RS03590 IPR000092 Polyprenyl synthetase RK88_RS03590 IPR008949 Isoprenoid synthase domain superfamily RK88_RS03595 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS03595 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS03595 IPR020900 Arginine repressor, DNA-binding domain RK88_RS03595 IPR036251 Arginine repressor, C-terminal domain superfamily RK88_RS03595 IPR020899 Arginine repressor, C-terminal RK88_RS03595 IPR001669 Arginine repressor RK88_RS03600 IPR038729 Rad50/SbcC-type AAA domain RK88_RS03600 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03600 IPR004604 DNA recombination/repair protein RecN RK88_RS03605 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RK88_RS03605 IPR023753 FAD/NAD(P)-binding domain RK88_RS03605 IPR006258 Dihydrolipoamide dehydrogenase RK88_RS03605 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RK88_RS03605 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS03605 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RK88_RS03605 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RK88_RS03610 IPR029061 Thiamin diphosphate-binding fold RK88_RS03610 IPR001017 Dehydrogenase, E1 component RK88_RS03615 IPR029061 Thiamin diphosphate-binding fold RK88_RS03615 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RK88_RS03615 IPR005475 Transketolase-like, pyrimidine-binding domain RK88_RS03615 IPR033248 Transketolase, C-terminal domain RK88_RS03620 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RK88_RS03620 IPR000089 Biotin/lipoyl attachment RK88_RS03620 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RK88_RS03620 IPR036625 E3-binding domain superfamily RK88_RS03620 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RK88_RS03620 IPR004167 Peripheral subunit-binding domain RK88_RS03620 IPR011053 Single hybrid motif RK88_RS03625 IPR009474 Putative bacilliredoxin, YphP/YqiW family RK88_RS03625 IPR036249 Thioredoxin-like superfamily RK88_RS03630 IPR021062 Putative aromatic acid exporter, C-terminal RK88_RS03630 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily RK88_RS03630 IPR010343 Aromatic acid exporter family member 1 RK88_RS03640 IPR011650 Peptidase M20, dimerisation domain RK88_RS03640 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RK88_RS03640 IPR036264 Bacterial exopeptidase dimerisation domain RK88_RS03640 IPR002933 Peptidase M20 RK88_RS03640 IPR010162 Peptidase M20B, peptidase T-like RK88_RS03640 IPR008007 Peptidase M42 RK88_RS03645 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RK88_RS03645 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RK88_RS03645 IPR006114 6-phosphogluconate dehydrogenase, C-terminal RK88_RS03645 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating RK88_RS03645 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding RK88_RS03645 IPR006184 6-phosphogluconate-binding site RK88_RS03645 IPR036291 NAD(P)-binding domain superfamily RK88_RS03645 IPR006183 6-phosphogluconate dehydrogenase RK88_RS03670 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RK88_RS03670 IPR028082 Periplasmic binding protein-like I RK88_RS03670 IPR000843 LacI-type HTH domain RK88_RS03675 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RK88_RS03675 IPR013780 Glycosyl hydrolase, all-beta RK88_RS03675 IPR017853 Glycoside hydrolase superfamily RK88_RS03675 IPR032091 Maltogenic Amylase, C-terminal RK88_RS03685 IPR019796 Glucose-6-phosphate dehydrogenase, active site RK88_RS03685 IPR036291 NAD(P)-binding domain superfamily RK88_RS03685 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding RK88_RS03685 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal RK88_RS03685 IPR001282 Glucose-6-phosphate dehydrogenase RK88_RS03690 IPR013471 Ribonuclease Z/BN RK88_RS03690 IPR001279 Metallo-beta-lactamase RK88_RS03690 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RK88_RS03695 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain RK88_RS03695 IPR000304 Pyrroline-5-carboxylate reductase RK88_RS03695 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RK88_RS03695 IPR036291 NAD(P)-binding domain superfamily RK88_RS03695 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RK88_RS03700 IPR020904 Short-chain dehydrogenase/reductase, conserved site RK88_RS03700 IPR002347 Short-chain dehydrogenase/reductase SDR RK88_RS03700 IPR036291 NAD(P)-binding domain superfamily RK88_RS03710 IPR036812 NADP-dependent oxidoreductase domain superfamily RK88_RS03710 IPR023210 NADP-dependent oxidoreductase domain RK88_RS03710 IPR020471 Aldo/keto reductase RK88_RS03715 IPR020084 NUDIX hydrolase, conserved site RK88_RS03715 IPR000086 NUDIX hydrolase domain RK88_RS03715 IPR015797 NUDIX hydrolase-like domain superfamily RK88_RS03715 IPR020476 NUDIX hydrolase RK88_RS03720 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS03720 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS03720 IPR002481 Ferric-uptake regulator RK88_RS03725 IPR023009 Tyrosine recombinase XerC/XerD RK88_RS03725 IPR011010 DNA breaking-rejoining enzyme, catalytic core RK88_RS03725 IPR013762 Integrase-like, catalytic domain superfamily RK88_RS03725 IPR004107 Integrase, SAM-like, N-terminal RK88_RS03725 IPR010998 Integrase/recombinase, N-terminal RK88_RS03725 IPR002104 Integrase, catalytic domain RK88_RS03725 IPR011932 Tyrosine recombinase XerD RK88_RS03735 IPR003768 Segregation and condensation protein A RK88_RS03740 IPR005234 Chromosome segregation/condensation protein ScpB RK88_RS03740 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS03740 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS03745 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F RK88_RS03745 IPR002942 RNA-binding S4 domain RK88_RS03745 IPR036986 RNA-binding S4 domain superfamily RK88_RS03745 IPR006145 Pseudouridine synthase, RsuA/RluA RK88_RS03745 IPR020103 Pseudouridine synthase, catalytic domain superfamily RK88_RS03745 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain RK88_RS03745 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site RK88_RS03750 IPR001867 OmpR/PhoB-type DNA-binding domain RK88_RS03750 IPR039420 Transcriptional regulatory protein WalR-like RK88_RS03750 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS03750 IPR011006 CheY-like superfamily RK88_RS03750 IPR001789 Signal transduction response regulator, receiver domain RK88_RS03755 IPR003660 HAMP domain RK88_RS03755 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS03755 IPR005467 Histidine kinase domain RK88_RS03755 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS03755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RK88_RS03755 IPR041328 ResE, histidine kinase sensor domain RK88_RS03755 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RK88_RS03755 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RK88_RS03785 IPR024529 ECF transporter, substrate-specific component RK88_RS03785 IPR025720 ECF transporter, Riboflavin transporter RibU RK88_RS03790 IPR001080 3Fe-4S ferredoxin RK88_RS03790 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RK88_RS03800 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site RK88_RS03800 IPR004589 DNA helicase, ATP-dependent, RecQ type RK88_RS03800 IPR001650 Helicase, C-terminal RK88_RS03800 IPR011545 DEAD/DEAH box helicase domain RK88_RS03800 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK88_RS03800 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03805 IPR018392 LysM domain RK88_RS03805 IPR036779 LysM domain superfamily RK88_RS03815 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA RK88_RS03815 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS03820 IPR020827 Asparaginase/glutaminase, active site 1 RK88_RS03820 IPR004550 L-asparaginase, type II RK88_RS03820 IPR006034 Asparaginase/glutaminase-like RK88_RS03820 IPR027475 Asparaginase/glutaminase, active site 2 RK88_RS03820 IPR036152 Asparaginase/glutaminase-like superfamily RK88_RS03820 IPR027473 L-asparaginase, C-terminal RK88_RS03820 IPR027474 L-asparaginase, N-terminal RK88_RS03820 IPR037152 L-asparaginase, N-terminal domain superfamily RK88_RS03820 IPR040919 Asparaginase/glutaminase, C-terminal RK88_RS03825 IPR003136 Cytidylate kinase RK88_RS03825 IPR011994 Cytidylate kinase domain RK88_RS03825 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03845 IPR003029 S1 domain RK88_RS03845 IPR012340 Nucleic acid-binding, OB-fold RK88_RS03845 IPR022967 RNA-binding domain, S1 RK88_RS03850 IPR016484 GTP-binding protein EngA RK88_RS03850 IPR006073 GTP binding domain RK88_RS03850 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03850 IPR005225 Small GTP-binding protein domain RK88_RS03850 IPR031166 EngA-type guanine nucleotide-binding (G) domain RK88_RS03850 IPR032859 GTPase Der, C-terminal KH-domain-like RK88_RS03850 IPR015946 K homology domain-like, alpha/beta RK88_RS03855 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal RK88_RS03855 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal RK88_RS03855 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RK88_RS03855 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RK88_RS03855 IPR036291 NAD(P)-binding domain superfamily RK88_RS03855 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent RK88_RS03860 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily RK88_RS03860 IPR020816 Histone-like DNA-binding protein, conserved site RK88_RS03860 IPR000119 Histone-like DNA-binding protein RK88_RS03875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS03875 IPR004033 UbiE/COQ5 methyltransferase RK88_RS03875 IPR023576 UbiE/COQ5 methyltransferase, conserved site RK88_RS03880 IPR000092 Polyprenyl synthetase RK88_RS03880 IPR033749 Polyprenyl synthetase, conserved site RK88_RS03880 IPR014119 Heptaprenyl diphosphate synthase component II RK88_RS03880 IPR008949 Isoprenoid synthase domain superfamily RK88_RS03885 IPR001564 Nucleoside diphosphate kinase RK88_RS03885 IPR023005 Nucleoside diphosphate kinase, active site RK88_RS03885 IPR034907 Nucleoside diphosphate kinase-like domain RK88_RS03885 IPR036850 Nucleoside diphosphate kinase-like domain superfamily RK88_RS03890 IPR020541 Chorismate synthase, conserved site RK88_RS03890 IPR035904 Chorismate synthase AroC superfamily RK88_RS03890 IPR000453 Chorismate synthase RK88_RS03895 IPR030960 3-dehydroquinate synthase domain RK88_RS03895 IPR030963 3-dehydroquinate synthase family RK88_RS03895 IPR016037 3-dehydroquinate synthase AroB RK88_RS03900 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site RK88_RS03900 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase RK88_RS03900 IPR001986 Enolpyruvate transferase domain RK88_RS03900 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta RK88_RS03900 IPR036968 Enolpyruvate transferase domain superfamily RK88_RS03910 IPR014957 IDEAL domain RK88_RS03910 IPR038091 UPF0302, N-terminal domain superfamily RK88_RS03910 IPR014963 Uncharacterised domain UPF0302, N-terminal RK88_RS03910 IPR011188 Uncharacterised protein family UPF0302 RK88_RS03915 IPR009845 Protein of unknown function DUF1405 RK88_RS03920 IPR007395 Putative neutral zinc metallopeptidase RK88_RS03925 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RK88_RS03925 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD RK88_RS03930 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain RK88_RS03930 IPR001296 Glycosyl transferase, family 1 RK88_RS03930 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA RK88_RS03935 IPR032810 CCA-adding enzyme, C-terminal RK88_RS03935 IPR023068 CCA-adding enzyme, firmicutes RK88_RS03935 IPR002646 Poly A polymerase, head domain RK88_RS03935 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain RK88_RS03940 IPR008988 Transcriptional repressor, C-terminal RK88_RS03940 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS03940 IPR004409 Biotin operon repressor, helix-turn-helix domain RK88_RS03940 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RK88_RS03940 IPR003142 Biotin protein ligase, C-terminal RK88_RS03940 IPR004408 Biotin--acetyl-CoA-carboxylase ligase RK88_RS03940 IPR030855 Bifunctional ligase/repressor BirA RK88_RS03940 IPR013196 Helix-turn-helix, type 11 RK88_RS03940 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS03945 IPR006555 ATP-dependent helicase, C-terminal RK88_RS03945 IPR001650 Helicase, C-terminal RK88_RS03945 IPR006310 3'-5' exonuclease DinG RK88_RS03945 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain RK88_RS03945 IPR013520 Exonuclease, RNase T/DNA polymerase III RK88_RS03945 IPR036397 Ribonuclease H superfamily RK88_RS03945 IPR012337 Ribonuclease H-like superfamily RK88_RS03945 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type RK88_RS03945 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS03950 IPR012340 Nucleic acid-binding, OB-fold RK88_RS03950 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RK88_RS03950 IPR006195 Aminoacyl-tRNA synthetase, class II RK88_RS03950 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RK88_RS03950 IPR004522 Asparagine-tRNA ligase RK88_RS03950 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb RK88_RS03955 IPR034829 DnaD-like domain superfamily RK88_RS03955 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS03955 IPR006343 DnaD domain RK88_RS03960 IPR005759 Endonuclease III RK88_RS03960 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal RK88_RS03960 IPR004035 Endonuclease III, iron-sulphur binding site RK88_RS03960 IPR000445 Helix-hairpin-helix motif RK88_RS03960 IPR011257 DNA glycosylase RK88_RS03960 IPR004036 Endonuclease III-like, conserved site-2 RK88_RS03960 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif RK88_RS03960 IPR003265 HhH-GPD domain RK88_RS03970 IPR001460 Penicillin-binding protein, transpeptidase RK88_RS03970 IPR036950 Penicillin binding protein transglycosylase domain RK88_RS03970 IPR023346 Lysozyme-like domain superfamily RK88_RS03970 IPR013783 Immunoglobulin-like fold RK88_RS03970 IPR001264 Glycosyl transferase, family 51 RK88_RS03970 IPR012338 Beta-lactamase/transpeptidase-like RK88_RS03970 IPR003961 Fibronectin type III RK88_RS03970 IPR036116 Fibronectin type III superfamily RK88_RS03975 IPR004612 Holliday junction resolvase RecU RK88_RS03975 IPR011856 tRNA endonuclease-like domain superfamily RK88_RS03975 IPR011335 Restriction endonuclease type II-like RK88_RS03990 IPR010697 YspA SLOG family RK88_RS03995 IPR011229 Cell cycle protein GpsB RK88_RS03995 IPR019933 DivIVA domain RK88_RS03995 IPR007793 DivIVA family RK88_RS04005 IPR000241 Putative RNA methylase domain RK88_RS04005 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS04005 IPR004114 THUMP domain RK88_RS04005 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RK88_RS04025 IPR022812 Dynamin superfamily RK88_RS04025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04025 IPR027094 Mitofusin family RK88_RS04030 IPR020045 DNA polymerase I-like, H3TH domain RK88_RS04030 IPR029060 PIN-like domain superfamily RK88_RS04030 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal RK88_RS04030 IPR038969 Flap endonuclease RK88_RS04030 IPR002421 5'-3' exonuclease, N-terminal RK88_RS04030 IPR008918 Helix-hairpin-helix motif, class 2 RK88_RS04030 IPR036279 5'-3' exonuclease, C-terminal domain superfamily RK88_RS04035 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 RK88_RS04035 IPR036291 NAD(P)-binding domain superfamily RK88_RS04035 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RK88_RS04035 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RK88_RS04035 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 RK88_RS04035 IPR008141 Alanine dehydrogenase RK88_RS04040 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RK88_RS04040 IPR005789 Threonine dehydratase, catabolic RK88_RS04040 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK88_RS04040 IPR001926 Pyridoxal-phosphate dependent enzyme RK88_RS04045 IPR002293 Amino acid/polyamine transporter I RK88_RS04050 IPR036259 MFS transporter superfamily RK88_RS04050 IPR020846 Major facilitator superfamily domain RK88_RS04050 IPR011701 Major facilitator superfamily RK88_RS04055 IPR026361 Extracellular matrix-binding protein Ebh domain RK88_RS04055 IPR009063 Immunoglobulin/albumin-binding domain superfamily RK88_RS04055 IPR002988 Protein G-related albumin-binding (GA) module RK88_RS04055 IPR020840 Extracellular matrix-binding protein ebh, GA module RK88_RS04055 IPR005877 YSIRK Gram-positive signal peptide RK88_RS04055 IPR011439 Domain of unknown function DUF1542 RK88_RS04065 IPR003744 Queuosine precursor transporter RK88_RS04070 IPR019718 Protein of unknown function DUF2602 RK88_RS04075 IPR011989 Armadillo-like helical RK88_RS04075 IPR016024 Armadillo-type fold RK88_RS04075 IPR014824 Scaffold protein Nfu/NifU, N-terminal RK88_RS04075 IPR004155 PBS lyase HEAT-like repeat RK88_RS04075 IPR025989 Virulence factor domain RK88_RS04075 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily RK88_RS04080 IPR025989 Virulence factor domain RK88_RS04080 IPR011989 Armadillo-like helical RK88_RS04080 IPR016024 Armadillo-type fold RK88_RS04080 IPR014824 Scaffold protein Nfu/NifU, N-terminal RK88_RS04080 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily RK88_RS04080 IPR004155 PBS lyase HEAT-like repeat RK88_RS04085 IPR036249 Thioredoxin-like superfamily RK88_RS04085 IPR009474 Putative bacilliredoxin, YphP/YqiW family RK88_RS04090 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily RK88_RS04090 IPR020940 Thymidylate synthase, active site RK88_RS04090 IPR000398 Thymidylate synthase RK88_RS04090 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain RK88_RS04095 IPR017925 Dihydrofolate reductase conserved site RK88_RS04095 IPR024072 Dihydrofolate reductase-like domain superfamily RK88_RS04095 IPR012259 Dihydrofolate reductase RK88_RS04095 IPR001796 Dihydrofolate reductase domain RK88_RS04100 IPR003797 DegV RK88_RS04105 IPR002569 Peptide methionine sulphoxide reductase MsrA RK88_RS04105 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily RK88_RS04110 IPR002579 Peptide methionine sulphoxide reductase MrsB RK88_RS04110 IPR028427 Peptide methionine sulfoxide reductase RK88_RS04110 IPR011057 Mss4-like superfamily RK88_RS04115 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 RK88_RS04115 IPR011055 Duplicated hybrid motif RK88_RS04120 IPR023089 YozE SAM-like domain RK88_RS04120 IPR036806 YozE SAM-like superfamily RK88_RS04120 IPR010673 Protein of unknown function UPF0346 RK88_RS04125 IPR012337 Ribonuclease H-like superfamily RK88_RS04125 IPR036397 Ribonuclease H superfamily RK88_RS04125 IPR001598 Transposase, IS30, conserved site RK88_RS04125 IPR001584 Integrase, catalytic core RK88_RS04125 IPR025246 Transposase IS30-like HTH domain RK88_RS04130 IPR005151 Tail specific protease RK88_RS04130 IPR029045 ClpP/crotonase-like domain superfamily RK88_RS04130 IPR001478 PDZ domain RK88_RS04130 IPR036034 PDZ superfamily RK88_RS04130 IPR004447 C-terminal-processing peptidase S41A RK88_RS04130 IPR036366 PGBD superfamily RK88_RS04130 IPR036365 PGBD-like superfamily RK88_RS04130 IPR002477 Peptidoglycan binding-like RK88_RS04140 IPR006009 N-acetylglucosaminyltransferase, MurG RK88_RS04140 IPR004276 Glycosyltransferase family 28, N-terminal domain RK88_RS04140 IPR007235 Glycosyl transferase, family 28, C-terminal RK88_RS04145 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily RK88_RS04145 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RK88_RS04160 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS04160 IPR039420 Transcriptional regulatory protein WalR-like RK88_RS04160 IPR001789 Signal transduction response regulator, receiver domain RK88_RS04160 IPR016032 Signal transduction response regulator, C-terminal effector RK88_RS04160 IPR001867 OmpR/PhoB-type DNA-binding domain RK88_RS04160 IPR011006 CheY-like superfamily RK88_RS04165 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS04165 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RK88_RS04165 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RK88_RS04165 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RK88_RS04165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS04165 IPR005467 Histidine kinase domain RK88_RS04165 IPR041610 ArlS, sensor domain RK88_RS04165 IPR003660 HAMP domain RK88_RS04170 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily RK88_RS04170 IPR001017 Dehydrogenase, E1 component RK88_RS04170 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial RK88_RS04170 IPR011603 2-oxoglutarate dehydrogenase E1 component RK88_RS04170 IPR005475 Transketolase-like, pyrimidine-binding domain RK88_RS04170 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal RK88_RS04170 IPR029061 Thiamin diphosphate-binding fold RK88_RS04175 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RK88_RS04175 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RK88_RS04175 IPR036625 E3-binding domain superfamily RK88_RS04175 IPR004167 Peripheral subunit-binding domain RK88_RS04175 IPR011053 Single hybrid motif RK88_RS04175 IPR000089 Biotin/lipoyl attachment RK88_RS04175 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RK88_RS04175 IPR006255 Dihydrolipoamide succinyltransferase RK88_RS04190 IPR001270 ClpA/B family RK88_RS04190 IPR013615 CbbQ/NirQ/NorQ, C-terminal RK88_RS04190 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04190 IPR011704 ATPase, dynein-related, AAA domain RK88_RS04195 IPR002035 von Willebrand factor, type A RK88_RS04195 IPR036465 von Willebrand factor A-like domain superfamily RK88_RS04200 IPR004685 Branched-chain amino acid transport system II carrier protein RK88_RS04205 IPR008863 Toxic anion resistance RK88_RS04215 IPR036046 Acylphosphatase-like domain superfamily RK88_RS04215 IPR017968 Acylphosphatase, conserved site RK88_RS04215 IPR001792 Acylphosphatase-like domain RK88_RS04230 IPR019844 Cold-shock (CSD) domain RK88_RS04230 IPR012156 Cold shock, CspA RK88_RS04230 IPR011129 Cold shock domain RK88_RS04230 IPR002059 Cold-shock protein, DNA-binding RK88_RS04230 IPR012340 Nucleic acid-binding, OB-fold RK88_RS04240 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RK88_RS04240 IPR002986 Diaminopimelate decarboxylase, LysA RK88_RS04240 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RK88_RS04240 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RK88_RS04240 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RK88_RS04240 IPR000183 Ornithine/DAP/Arg decarboxylase RK88_RS04240 IPR029066 PLP-binding barrel RK88_RS04245 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RK88_RS04245 IPR011079 Alanine racemase, C-terminal RK88_RS04245 IPR001608 Alanine racemase, N-terminal RK88_RS04245 IPR029066 PLP-binding barrel RK88_RS04245 IPR000821 Alanine racemase RK88_RS04250 IPR017439 Amidohydrolase RK88_RS04250 IPR036264 Bacterial exopeptidase dimerisation domain RK88_RS04250 IPR011650 Peptidase M20, dimerisation domain RK88_RS04250 IPR002933 Peptidase M20 RK88_RS04255 IPR011004 Trimeric LpxA-like superfamily RK88_RS04255 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal RK88_RS04255 IPR001451 Hexapeptide repeat RK88_RS04255 IPR018357 Hexapeptide transferase, conserved site RK88_RS04255 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH RK88_RS04260 IPR036291 NAD(P)-binding domain superfamily RK88_RS04260 IPR023940 Dihydrodipicolinate reductase RK88_RS04260 IPR022664 Dihydrodipicolinate reductase, conserved site RK88_RS04260 IPR000846 Dihydrodipicolinate reductase, N-terminal RK88_RS04260 IPR022663 Dihydrodipicolinate reductase, C-terminal RK88_RS04265 IPR020625 Schiff base-forming aldolase, active site RK88_RS04265 IPR013785 Aldolase-type TIM barrel RK88_RS04265 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA RK88_RS04265 IPR002220 DapA-like RK88_RS04270 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type RK88_RS04270 IPR000534 Semialdehyde dehydrogenase, NAD-binding RK88_RS04270 IPR036291 NAD(P)-binding domain superfamily RK88_RS04270 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RK88_RS04270 IPR012080 Aspartate-semialdehyde dehydrogenase RK88_RS04270 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site RK88_RS04275 IPR018042 Aspartate kinase, conserved site RK88_RS04275 IPR001048 Aspartate/glutamate/uridylate kinase RK88_RS04275 IPR041740 Aspartokinase catalytic domain RK88_RS04275 IPR036393 Acetylglutamate kinase-like superfamily RK88_RS04275 IPR027795 CASTOR, ACT domain RK88_RS04275 IPR001341 Aspartate kinase RK88_RS04275 IPR002912 ACT domain RK88_RS04275 IPR005260 Aspartate kinase, monofunctional class RK88_RS04280 IPR003593 AAA+ ATPase domain RK88_RS04280 IPR032781 ABC-transporter extension domain RK88_RS04280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04280 IPR003439 ABC transporter-like RK88_RS04285 IPR040764 Conserved virulence factor B-like, winged helix domain RK88_RS04285 IPR039566 Conserved virulence factor B, S1 domain RK88_RS04285 IPR014464 Conserved virulence factor B RK88_RS04285 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS04290 IPR024370 PBP domain RK88_RS04290 IPR011862 Phosphate binding protein RK88_RS04295 IPR011864 Phosphate ABC transporter, permease protein PstC RK88_RS04295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS04295 IPR035906 MetI-like superfamily RK88_RS04300 IPR035906 MetI-like superfamily RK88_RS04300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS04300 IPR005672 Phosphate transport system permease protein PstA RK88_RS04305 IPR003593 AAA+ ATPase domain RK88_RS04305 IPR003439 ABC transporter-like RK88_RS04305 IPR017871 ABC transporter, conserved site RK88_RS04305 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04305 IPR005670 Phosphate transport system permease protein 1 RK88_RS04305 IPR015850 ABC transporter, phosphate import, PstB RK88_RS04310 IPR028366 Phosphate transport system protein PhoU RK88_RS04310 IPR038078 PhoU-like domain superfamily RK88_RS04310 IPR026022 PhoU domain RK88_RS04315 IPR042088 Oligoendopeptidase F, C-terminal domain RK88_RS04315 IPR001567 Peptidase M3A/M3B catalytic domain RK88_RS04315 IPR004438 Peptidase M3B, oligoendopeptidase F RK88_RS04315 IPR013647 Oligopeptidase F, N-terminal domain RK88_RS04330 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS04330 IPR035906 MetI-like superfamily RK88_RS04335 IPR035906 MetI-like superfamily RK88_RS04335 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS04340 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04340 IPR003593 AAA+ ATPase domain RK88_RS04340 IPR003439 ABC transporter-like RK88_RS04345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04345 IPR003593 AAA+ ATPase domain RK88_RS04345 IPR003439 ABC transporter-like RK88_RS04360 IPR003447 FemABX peptidyl transferase RK88_RS04360 IPR016181 Acyl-CoA N-acyltransferase RK88_RS04365 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RK88_RS04365 IPR016181 Acyl-CoA N-acyltransferase RK88_RS04365 IPR003447 FemABX peptidyl transferase RK88_RS04370 IPR011060 Ribulose-phosphate binding barrel RK88_RS04370 IPR013785 Aldolase-type TIM barrel RK88_RS04370 IPR002028 Tryptophan synthase, alpha chain RK88_RS04370 IPR018204 Tryptophan synthase, alpha chain, active site RK88_RS04375 IPR001926 Pyridoxal-phosphate dependent enzyme RK88_RS04375 IPR006654 Tryptophan synthase, beta chain RK88_RS04375 IPR006653 Tryptophan synthase, beta chain, conserved site RK88_RS04375 IPR023026 Tryptophan synthase beta chain/beta chain-like RK88_RS04375 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK88_RS04380 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) RK88_RS04380 IPR013785 Aldolase-type TIM barrel RK88_RS04380 IPR011060 Ribulose-phosphate binding barrel RK88_RS04385 IPR013785 Aldolase-type TIM barrel RK88_RS04385 IPR013798 Indole-3-glycerol phosphate synthase RK88_RS04385 IPR001468 Indole-3-glycerol phosphate synthase, conserved site RK88_RS04385 IPR011060 Ribulose-phosphate binding barrel RK88_RS04395 IPR017926 Glutamine amidotransferase RK88_RS04395 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain RK88_RS04395 IPR029062 Class I glutamine amidotransferase-like RK88_RS04400 IPR015890 Chorismate-utilising enzyme, C-terminal RK88_RS04400 IPR006805 Anthranilate synthase component I, N-terminal RK88_RS04400 IPR005256 Anthranilate synthase component I, PabB-like RK88_RS04400 IPR019999 Anthranilate synthase component I-like RK88_RS04400 IPR005801 ADC synthase RK88_RS04405 IPR023367 Peptidase M42, domain 2 RK88_RS04405 IPR008007 Peptidase M42 RK88_RS04410 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RK88_RS04410 IPR002912 ACT domain RK88_RS04410 IPR036291 NAD(P)-binding domain superfamily RK88_RS04410 IPR003099 Prephenate dehydrogenase RK88_RS04415 IPR017961 DNA polymerase, Y-family, little finger domain RK88_RS04415 IPR036775 DNA polymerase, Y-family, little finger domain superfamily RK88_RS04415 IPR001126 UmuC domain RK88_RS04415 IPR024728 DNA polymerase type-Y, HhH motif RK88_RS04420 IPR004370 4-oxalocrotonate tautomerase RK88_RS04420 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type RK88_RS04420 IPR014347 Tautomerase/MIF superfamily RK88_RS04430 IPR004474 Cell envelope-related transcriptional attenuator domain RK88_RS04435 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily RK88_RS04435 IPR002569 Peptide methionine sulphoxide reductase MsrA RK88_RS04440 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RK88_RS04440 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal RK88_RS04440 IPR016181 Acyl-CoA N-acyltransferase RK88_RS04445 IPR002549 Transmembrane protein TqsA-like RK88_RS04455 IPR004341 CAT RNA-binding domain RK88_RS04455 IPR036650 CAT RNA-binding domain superfamily RK88_RS04455 IPR011608 PRD domain RK88_RS04455 IPR036634 PRD domain superfamily RK88_RS04455 IPR001550 Transcription antiterminator, conserved site RK88_RS04460 IPR001463 Sodium:alanine symporter RK88_RS04470 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily RK88_RS04470 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RK88_RS04470 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RK88_RS04470 IPR005741 DNA topoisomerase IV subunit A, Gram-positive RK88_RS04470 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RK88_RS04470 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat RK88_RS04470 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RK88_RS04475 IPR006171 TOPRIM domain RK88_RS04475 IPR018522 DNA topoisomerase, type IIA, conserved site RK88_RS04475 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RK88_RS04475 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal RK88_RS04475 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RK88_RS04475 IPR001241 DNA topoisomerase, type IIA RK88_RS04475 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS04475 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes RK88_RS04475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS04475 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS04475 IPR002288 DNA gyrase B subunit, C-terminal RK88_RS04475 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS04480 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY RK88_RS04490 IPR035903 HesB-like domain superfamily RK88_RS04490 IPR008326 Uncharacterised conserved protein UCP034852 RK88_RS04500 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family RK88_RS04500 IPR006683 Thioesterase domain RK88_RS04500 IPR029069 HotDog domain superfamily RK88_RS04505 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain RK88_RS04505 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 RK88_RS04505 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain RK88_RS04505 IPR036008 Aconitase, iron-sulfur domain RK88_RS04505 IPR018136 Aconitase family, 4Fe-4S cluster binding site RK88_RS04505 IPR006249 Aconitase/Iron-responsive element-binding protein 2 RK88_RS04505 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RK88_RS04510 IPR018093 BCCT transporter, conserved site RK88_RS04510 IPR000060 BCCT transporter family RK88_RS04515 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L RK88_RS04515 IPR001185 Large-conductance mechanosensitive channel RK88_RS04515 IPR019823 Large-conductance mechanosensitive channel, conserved site RK88_RS04515 IPR036019 Gated mechanosensitive channel RK88_RS04520 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04520 IPR038729 Rad50/SbcC-type AAA domain RK88_RS04525 IPR026843 Nuclease SbcCD subunit D, C-terminal domain RK88_RS04525 IPR004593 Nuclease SbcCD subunit D RK88_RS04525 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain RK88_RS04525 IPR029052 Metallo-dependent phosphatase-like RK88_RS04525 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RK88_RS04530 IPR031306 CcdC protein RK88_RS04540 IPR005359 Protein with unknown function UPF0154 RK88_RS04540 IPR011992 EF-hand domain pair RK88_RS04545 IPR029061 Thiamin diphosphate-binding fold RK88_RS04545 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RK88_RS04545 IPR005475 Transketolase-like, pyrimidine-binding domain RK88_RS04545 IPR005474 Transketolase, N-terminal RK88_RS04545 IPR033247 Transketolase family RK88_RS04545 IPR033248 Transketolase, C-terminal domain RK88_RS04545 IPR005478 Transketolase, bacterial-like RK88_RS04545 IPR020826 Transketolase binding site RK88_RS04550 IPR009242 Protein of unknown function DUF896 RK88_RS04560 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS04560 IPR015927 Peptidase S24/S26A/S26B/S26C RK88_RS04560 IPR011991 ArsR-like helix-turn-helix domain RK88_RS04560 IPR006200 Transcription regulator LexA RK88_RS04560 IPR039418 LexA-like RK88_RS04560 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS04560 IPR006197 Peptidase S24, LexA-like RK88_RS04560 IPR036286 LexA/Signal peptidase-like superfamily RK88_RS04560 IPR006199 LexA repressor, DNA-binding domain RK88_RS04575 IPR013785 Aldolase-type TIM barrel RK88_RS04575 IPR005994 Guanosine monophosphate reductase, type2 RK88_RS04575 IPR001093 IMP dehydrogenase/GMP reductase RK88_RS04575 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RK88_RS04580 IPR023036 Ribosomal protein S14, bacterial/plastid RK88_RS04580 IPR018271 Ribosomal protein S14, conserved site RK88_RS04580 IPR001209 Ribosomal protein S14 RK88_RS04585 IPR018264 Ribosomal protein L33, conserved site RK88_RS04585 IPR011332 Zinc-binding ribosomal protein RK88_RS04585 IPR001705 Ribosomal protein L33 RK88_RS04585 IPR038584 Ribosomal protein L33 superfamily RK88_RS04590 IPR010582 Catalase immune-responsive domain RK88_RS04590 IPR018028 Catalase, mono-functional, haem-containing RK88_RS04590 IPR040333 Catalase, clade 3 RK88_RS04590 IPR002226 Catalase haem-binding site RK88_RS04590 IPR037060 Catalase core domain superfamily RK88_RS04590 IPR011614 Catalase core domain RK88_RS04590 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 RK88_RS04590 IPR024708 Catalase active site RK88_RS04590 IPR020835 Catalase superfamily RK88_RS04595 IPR004841 Amino acid permease/ SLC12A domain RK88_RS04595 IPR004840 Amino acid permease, conserved site RK88_RS04610 IPR036412 HAD-like superfamily RK88_RS04610 IPR000150 Cof family RK88_RS04610 IPR006379 HAD-superfamily hydrolase, subfamily IIB RK88_RS04615 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS04615 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS04615 IPR013750 GHMP kinase, C-terminal domain RK88_RS04615 IPR036554 GHMP kinase, C-terminal domain superfamily RK88_RS04615 IPR000870 Homoserine kinase RK88_RS04615 IPR006204 GHMP kinase N-terminal domain RK88_RS04615 IPR006203 GHMP kinase, ATP-binding, conserved site RK88_RS04620 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK88_RS04620 IPR001926 Pyridoxal-phosphate dependent enzyme RK88_RS04620 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site RK88_RS04620 IPR004450 Threonine synthase-like RK88_RS04620 IPR026260 Threonine synthase, bacterial/archaeal RK88_RS04625 IPR036291 NAD(P)-binding domain superfamily RK88_RS04625 IPR016204 Homoserine dehydrogenase RK88_RS04625 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding RK88_RS04625 IPR019811 Homoserine dehydrogenase, conserved site RK88_RS04625 IPR001342 Homoserine dehydrogenase, catalytic RK88_RS04625 IPR002912 ACT domain RK88_RS04630 IPR036393 Acetylglutamate kinase-like superfamily RK88_RS04630 IPR001341 Aspartate kinase RK88_RS04630 IPR027795 CASTOR, ACT domain RK88_RS04630 IPR018042 Aspartate kinase, conserved site RK88_RS04630 IPR035804 Aspartokinase 3, N-terminal RK88_RS04630 IPR001048 Aspartate/glutamate/uridylate kinase RK88_RS04630 IPR005260 Aspartate kinase, monofunctional class RK88_RS04630 IPR002912 ACT domain RK88_RS04645 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RK88_RS04645 IPR002071 Thermonuclease active site RK88_RS04645 IPR035437 SNase-like, OB-fold superfamily RK88_RS04660 IPR011006 CheY-like superfamily RK88_RS04660 IPR001789 Signal transduction response regulator, receiver domain RK88_RS04660 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS04660 IPR016032 Signal transduction response regulator, C-terminal effector RK88_RS04660 IPR000792 Transcription regulator LuxR, C-terminal RK88_RS04675 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04675 IPR017871 ABC transporter, conserved site RK88_RS04675 IPR003439 ABC transporter-like RK88_RS04675 IPR003593 AAA+ ATPase domain RK88_RS04680 IPR001736 Phospholipase D/Transphosphatidylase RK88_RS04680 IPR027379 Cardiolipin synthase N-terminal RK88_RS04680 IPR022924 Cardiolipin synthase RK88_RS04680 IPR025202 Phospholipase D-like domain RK88_RS04680 IPR030874 Cardiolipin synthase, Firmicutes-type RK88_RS04785 IPR001584 Integrase, catalytic core RK88_RS04785 IPR025246 Transposase IS30-like HTH domain RK88_RS04785 IPR012337 Ribonuclease H-like superfamily RK88_RS04785 IPR036397 Ribonuclease H superfamily RK88_RS04785 IPR001598 Transposase, IS30, conserved site RK88_RS04825 IPR003491 Replication initiation factor RK88_RS04825 IPR040819 Rolling Circle replication initiation protein, N-terminal RK88_RS04845 IPR016628 ATPase, SAG2001, predicted RK88_RS04845 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04850 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04850 IPR002543 FtsK domain RK88_RS04885 IPR027302 Glutamine synthetase, N-terminal conserved site RK88_RS04885 IPR004809 Glutamine synthetase type I RK88_RS04885 IPR036651 Glutamine synthetase, N-terminal domain superfamily RK88_RS04885 IPR027303 Glutamine synthetase, glycine-rich site RK88_RS04885 IPR008146 Glutamine synthetase, catalytic domain RK88_RS04885 IPR008147 Glutamine synthetase, beta-Grasp domain RK88_RS04885 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RK88_RS04890 IPR000551 MerR-type HTH domain RK88_RS04890 IPR009061 Putative DNA-binding domain superfamily RK88_RS04895 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS04895 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS04895 IPR009651 Putative methionine gamma-lyase RK88_RS04905 IPR029760 Glutathione peroxidase conserved site RK88_RS04905 IPR000889 Glutathione peroxidase RK88_RS04905 IPR036249 Thioredoxin-like superfamily RK88_RS04910 IPR010920 LSM domain superfamily RK88_RS04910 IPR005001 RNA-binding protein Hfq RK88_RS04915 IPR039657 Dimethylallyltransferase RK88_RS04915 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04915 IPR018022 IPP transferase RK88_RS04925 IPR006076 FAD dependent oxidoreductase RK88_RS04925 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily RK88_RS04925 IPR031656 Alpha-glycerophosphate oxidase, C-terminal RK88_RS04925 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS04925 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase RK88_RS04930 IPR000577 Carbohydrate kinase, FGGY RK88_RS04930 IPR018485 Carbohydrate kinase, FGGY, C-terminal RK88_RS04930 IPR018484 Carbohydrate kinase, FGGY, N-terminal RK88_RS04930 IPR005999 Glycerol kinase RK88_RS04930 IPR018483 Carbohydrate kinase, FGGY, conserved site RK88_RS04935 IPR000425 Major intrinsic protein RK88_RS04935 IPR022357 Major intrinsic protein, conserved site RK88_RS04935 IPR023271 Aquaporin-like RK88_RS04940 IPR035928 GlpP-like superfamily RK88_RS04940 IPR006699 Glycerol uptake operon antiterminator RK88_RS04945 IPR042121 MutL, C-terminal domain, regulatory subdomain RK88_RS04945 IPR014790 MutL, C-terminal, dimerisation RK88_RS04945 IPR042120 MutL, C-terminal domain, dimerisation subdomain RK88_RS04945 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS04945 IPR013507 DNA mismatch repair protein, S5 domain 2-like RK88_RS04945 IPR002099 DNA mismatch repair protein family, N-terminal RK88_RS04945 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS04945 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS04945 IPR037198 MutL, C-terminal domain superfamily RK88_RS04945 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms RK88_RS04945 IPR020667 DNA mismatch repair protein, MutL RK88_RS04945 IPR014762 DNA mismatch repair, conserved site RK88_RS04950 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS04950 IPR005748 DNA mismatch repair protein MutS RK88_RS04950 IPR007695 DNA mismatch repair protein MutS-like, N-terminal RK88_RS04950 IPR000432 DNA mismatch repair protein MutS, C-terminal RK88_RS04950 IPR007861 DNA mismatch repair protein MutS, clamp RK88_RS04950 IPR017261 DNA mismatch repair protein MutS/MSH RK88_RS04950 IPR016151 DNA mismatch repair protein MutS, N-terminal RK88_RS04950 IPR036187 DNA mismatch repair protein MutS, core domain superfamily RK88_RS04950 IPR007860 DNA mismatch repair protein MutS, connector domain RK88_RS04950 IPR036678 MutS, connector domain superfamily RK88_RS04950 IPR007696 DNA mismatch repair protein MutS, core RK88_RS04965 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB RK88_RS04965 IPR005839 Methylthiotransferase RK88_RS04965 IPR020612 Methylthiotransferase, conserved site RK88_RS04965 IPR013848 Methylthiotransferase, N-terminal RK88_RS04965 IPR038135 Methylthiotransferase, N-terminal domain superfamily RK88_RS04965 IPR007197 Radical SAM RK88_RS04965 IPR006638 Elp3/MiaB/NifB RK88_RS04965 IPR002792 TRAM domain RK88_RS04965 IPR023404 Radical SAM, alpha/beta horseshoe RK88_RS04970 IPR029756 MTH1187/YkoF-like RK88_RS04970 IPR002767 Thiamine-binding protein RK88_RS04975 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RK88_RS04975 IPR029061 Thiamin diphosphate-binding fold RK88_RS04980 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain RK88_RS04980 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II RK88_RS04980 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal RK88_RS04980 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain RK88_RS04980 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RK88_RS04980 IPR029061 Thiamin diphosphate-binding fold RK88_RS04980 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit RK88_RS04985 IPR005235 Metallophosphoesterase, YmdB-like RK88_RS04985 IPR029052 Metallo-dependent phosphatase-like RK88_RS04995 IPR006674 HD domain RK88_RS04995 IPR022711 Ribonuclease Y, N-terminal RK88_RS04995 IPR004088 K Homology domain, type 1 RK88_RS04995 IPR036612 K Homology domain, type 1 superfamily RK88_RS04995 IPR003607 HD/PDEase domain RK88_RS04995 IPR004087 K Homology domain RK88_RS04995 IPR017705 Ribonuclease Y RK88_RS04995 IPR006675 HDIG domain RK88_RS05000 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain RK88_RS05000 IPR023400 DNA recombination and repair protein RecA, C-terminal RK88_RS05000 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface RK88_RS05000 IPR003593 AAA+ ATPase domain RK88_RS05000 IPR013765 DNA recombination and repair protein RecA RK88_RS05000 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05000 IPR020584 DNA recombination/repair protein RecA, conserved site RK88_RS05005 IPR036653 CinA-like, C-terminal RK88_RS05005 IPR008136 CinA, C-terminal RK88_RS05005 IPR041424 CinA, KH domain RK88_RS05005 IPR008135 Competence-induced protein CinA RK88_RS05005 IPR036425 MoaB/Mog-like domain superfamily RK88_RS05005 IPR001453 MoaB/Mog domain RK88_RS05010 IPR000462 CDP-alcohol phosphatidyltransferase RK88_RS05010 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase RK88_RS05020 IPR002912 ACT domain RK88_RS05020 IPR024514 Domain of unknown function DUF3388 RK88_RS05020 IPR016784 Uncharacterised protein UCP021288 with ACT domain RK88_RS05025 IPR002347 Short-chain dehydrogenase/reductase SDR RK88_RS05025 IPR036291 NAD(P)-binding domain superfamily RK88_RS05030 IPR007863 Peptidase M16, C-terminal RK88_RS05030 IPR011765 Peptidase M16, N-terminal RK88_RS05030 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RK88_RS05035 IPR007863 Peptidase M16, C-terminal RK88_RS05035 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like RK88_RS05040 IPR011663 UbiC transcription regulator-associated RK88_RS05040 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS05040 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS05040 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RK88_RS05040 IPR000524 Transcription regulator HTH, GntR RK88_RS05045 IPR018541 FtsK gamma domain RK88_RS05045 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS05045 IPR003593 AAA+ ATPase domain RK88_RS05045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05045 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS05045 IPR041027 FtsK alpha domain RK88_RS05045 IPR002543 FtsK domain RK88_RS05050 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RK88_RS05050 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RK88_RS05050 IPR004613 Ribonuclease J RK88_RS05050 IPR001279 Metallo-beta-lactamase RK88_RS05050 IPR042173 Ribonuclease J, domain 2 RK88_RS05050 IPR030854 Ribonuclease J, bacteria RK88_RS05050 IPR041636 Ribonuclease J, C-terminal RK88_RS05060 IPR001247 Exoribonuclease, phosphorolytic domain 1 RK88_RS05060 IPR036345 Exoribonuclease, PH domain 2 superfamily RK88_RS05060 IPR012340 Nucleic acid-binding, OB-fold RK88_RS05060 IPR003029 S1 domain RK88_RS05060 IPR012162 Polyribonucleotide nucleotidyltransferase RK88_RS05060 IPR004088 K Homology domain, type 1 RK88_RS05060 IPR015847 Exoribonuclease, phosphorolytic domain 2 RK88_RS05060 IPR004087 K Homology domain RK88_RS05060 IPR036612 K Homology domain, type 1 superfamily RK88_RS05060 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain RK88_RS05060 IPR022967 RNA-binding domain, S1 RK88_RS05060 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS05060 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily RK88_RS05060 IPR027408 PNPase/RNase PH domain superfamily RK88_RS05065 IPR000589 Ribosomal protein S15 RK88_RS05065 IPR005290 Ribosomal protein S15, bacterial-type RK88_RS05065 IPR009068 S15/NS1, RNA-binding RK88_RS05070 IPR004821 Cytidyltransferase-like domain RK88_RS05070 IPR023465 Riboflavin kinase domain superfamily RK88_RS05070 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic RK88_RS05070 IPR002606 Riboflavin kinase, bacterial RK88_RS05070 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS05070 IPR023468 Riboflavin kinase RK88_RS05070 IPR015864 FAD synthetase RK88_RS05075 IPR020103 Pseudouridine synthase, catalytic domain superfamily RK88_RS05075 IPR032819 tRNA pseudouridylate synthase B, C-terminal RK88_RS05075 IPR014780 tRNA pseudouridine synthase II, TruB RK88_RS05075 IPR002501 Pseudouridine synthase II, N-terminal RK88_RS05080 IPR020053 Ribosome-binding factor A, conserved site RK88_RS05080 IPR023799 Ribosome-binding factor A domain superfamily RK88_RS05080 IPR015946 K homology domain-like, alpha/beta RK88_RS05080 IPR000238 Ribosome-binding factor A RK88_RS05085 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05085 IPR006847 Translation initiation factor IF-2, N-terminal RK88_RS05085 IPR005225 Small GTP-binding protein domain RK88_RS05085 IPR000795 Transcription factor, GTP-binding domain RK88_RS05085 IPR015760 Translation initiation factor IF- 2 RK88_RS05085 IPR023115 Translation initiation factor IF- 2, domain 3 RK88_RS05085 IPR036925 Translation initiation factor IF-2, domain 3 superfamily RK88_RS05085 IPR009000 Translation protein, beta-barrel domain superfamily RK88_RS05085 IPR000178 Translation initiation factor aIF-2, bacterial-like RK88_RS05090 IPR029064 50S ribosomal protein L30e-like RK88_RS05090 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 RK88_RS05090 IPR039107 Ribosomal protein YlxQ RK88_RS05090 IPR039109 Ribosomal protein L30/YlxQ RK88_RS05095 IPR037465 Uncharacterized protein YlxR RK88_RS05095 IPR035931 YlxR-like superfamily RK88_RS05095 IPR007393 Domain of unknown function DUF448 RK88_RS05100 IPR022967 RNA-binding domain, S1 RK88_RS05100 IPR036555 NusA, N-terminal domain superfamily RK88_RS05100 IPR030842 Transcription termination/antitermination protein NusA, bacterial RK88_RS05100 IPR012340 Nucleic acid-binding, OB-fold RK88_RS05100 IPR009019 K homology domain superfamily, prokaryotic type RK88_RS05100 IPR025249 KH domain, NusA-like RK88_RS05100 IPR015946 K homology domain-like, alpha/beta RK88_RS05100 IPR004087 K Homology domain RK88_RS05100 IPR003029 S1 domain RK88_RS05100 IPR013735 Transcription factor NusA, N-terminal RK88_RS05100 IPR010213 Transcription termination factor NusA RK88_RS05105 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily RK88_RS05105 IPR003728 Ribosome maturation factor RimP RK88_RS05105 IPR028998 Ribosome maturation factor RimP, C-terminal RK88_RS05105 IPR035956 RimP, N-terminal domain superfamily RK88_RS05105 IPR028989 Ribosome maturation factor RimP, N-terminal RK88_RS05115 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain RK88_RS05115 IPR036397 Ribonuclease H superfamily RK88_RS05115 IPR012337 Ribonuclease H-like superfamily RK88_RS05115 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type RK88_RS05115 IPR003141 Polymerase/histidinol phosphatase, N-terminal RK88_RS05115 IPR004013 PHP domain RK88_RS05115 IPR013520 Exonuclease, RNase T/DNA polymerase III RK88_RS05115 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain RK88_RS05115 IPR040982 DNA polymerase III alpha subunit finger domain RK88_RS05115 IPR024754 DNA polymerase III polC-like, N-terminal domain II RK88_RS05115 IPR028112 DNA polymerase III polC-type, N-terminal domain I RK88_RS05115 IPR029460 DNA polymerase, helix-hairpin-helix motif RK88_RS05120 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RK88_RS05120 IPR002316 Proline-tRNA ligase, class IIa RK88_RS05120 IPR036621 Anticodon-binding domain superfamily RK88_RS05120 IPR004154 Anticodon-binding RK88_RS05120 IPR006195 Aminoacyl-tRNA synthetase, class II RK88_RS05120 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RK88_RS05120 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type RK88_RS05120 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily RK88_RS05120 IPR033730 Prokaryote proline-tRNA ligase core domain RK88_RS05120 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 RK88_RS05125 IPR001478 PDZ domain RK88_RS05125 IPR036034 PDZ superfamily RK88_RS05125 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase RK88_RS05125 IPR008915 Peptidase M50 RK88_RS05130 IPR000374 Phosphatidate cytidylyltransferase RK88_RS05135 IPR001441 Decaprenyl diphosphate synthase-like RK88_RS05135 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site RK88_RS05135 IPR036424 Decaprenyl diphosphate synthase-like superfamily RK88_RS05140 IPR002661 Ribosome recycling factor RK88_RS05140 IPR023584 Ribosome recycling factor domain RK88_RS05140 IPR036191 RRF superfamily RK88_RS05145 IPR001048 Aspartate/glutamate/uridylate kinase RK88_RS05145 IPR036393 Acetylglutamate kinase-like superfamily RK88_RS05145 IPR011817 Uridylate kinase RK88_RS05145 IPR015963 Uridylate kinase, bacteria RK88_RS05150 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation RK88_RS05150 IPR036402 Elongation factor Ts, dimerisation domain superfamily RK88_RS05150 IPR001816 Translation elongation factor EFTs/EF1B RK88_RS05150 IPR009060 UBA-like superfamily RK88_RS05150 IPR018101 Translation elongation factor Ts, conserved site RK88_RS05160 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily RK88_RS05160 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid RK88_RS05160 IPR018130 Ribosomal protein S2, conserved site RK88_RS05160 IPR001865 Ribosomal protein S2 RK88_RS05170 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS05170 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal RK88_RS05170 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal RK88_RS05170 IPR029016 GAF-like domain superfamily RK88_RS05170 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS05170 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY RK88_RS05175 IPR003959 ATPase, AAA-type, core RK88_RS05175 IPR019489 Clp ATPase, C-terminal RK88_RS05175 IPR003593 AAA+ ATPase domain RK88_RS05175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05175 IPR004491 Heat shock protein HslU RK88_RS05180 IPR001353 Proteasome, subunit alpha/beta RK88_RS05180 IPR023333 Proteasome B-type subunit RK88_RS05180 IPR022281 ATP-dependent protease, HslV subunit RK88_RS05180 IPR029055 Nucleophile aminohydrolases, N-terminal RK88_RS05185 IPR023009 Tyrosine recombinase XerC/XerD RK88_RS05185 IPR011931 Tyrosine recombinase XerC RK88_RS05185 IPR004107 Integrase, SAM-like, N-terminal RK88_RS05185 IPR011010 DNA breaking-rejoining enzyme, catalytic core RK88_RS05185 IPR013762 Integrase-like, catalytic domain superfamily RK88_RS05185 IPR002104 Integrase, catalytic domain RK88_RS05185 IPR010998 Integrase/recombinase, N-terminal RK88_RS05190 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS05190 IPR020595 MnmG-related, conserved site RK88_RS05190 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO RK88_RS05190 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related RK88_RS05195 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RK88_RS05195 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 RK88_RS05195 IPR023405 DNA topoisomerase, type IA, core domain RK88_RS05195 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RK88_RS05195 IPR005733 DNA topoisomerase I, bacterial-type RK88_RS05195 IPR013497 DNA topoisomerase, type IA, central RK88_RS05195 IPR006171 TOPRIM domain RK88_RS05195 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RK88_RS05195 IPR013498 DNA topoisomerase, type IA, zn finger RK88_RS05195 IPR000380 DNA topoisomerase, type IA RK88_RS05195 IPR003601 DNA topoisomerase, type IA, domain 2 RK88_RS05195 IPR028612 DNA topoisomerase I, type IA RK88_RS05195 IPR023406 DNA topoisomerase, type IA, active site RK88_RS05195 IPR034149 DNA topoisomerase 1, TOPRIM domain RK88_RS05205 IPR016181 Acyl-CoA N-acyltransferase RK88_RS05205 IPR003447 FemABX peptidyl transferase RK88_RS05205 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RK88_RS05210 IPR036779 LysM domain superfamily RK88_RS05210 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS05210 IPR018392 LysM domain RK88_RS05210 IPR005877 YSIRK Gram-positive signal peptide RK88_RS05210 IPR007921 CHAP domain RK88_RS05215 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RK88_RS05215 IPR036291 NAD(P)-binding domain superfamily RK88_RS05215 IPR016102 Succinyl-CoA synthetase-like RK88_RS05215 IPR003781 CoA-binding RK88_RS05215 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site RK88_RS05215 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RK88_RS05215 IPR005810 Succinyl-CoA ligase, alpha subunit RK88_RS05220 IPR016102 Succinyl-CoA synthetase-like RK88_RS05220 IPR005809 Succinate--CoA synthetase, beta subunit RK88_RS05220 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site RK88_RS05220 IPR005811 ATP-citrate lyase/succinyl-CoA ligase RK88_RS05220 IPR013815 ATP-grasp fold, subdomain 1 RK88_RS05220 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type RK88_RS05220 IPR011761 ATP-grasp fold RK88_RS05225 IPR024567 Ribonuclease HII/HIII domain RK88_RS05225 IPR001352 Ribonuclease HII/HIII RK88_RS05225 IPR022898 Ribonuclease HII RK88_RS05225 IPR012337 Ribonuclease H-like superfamily RK88_RS05225 IPR036397 Ribonuclease H superfamily RK88_RS05230 IPR006073 GTP binding domain RK88_RS05230 IPR016478 GTPase, MTG1 RK88_RS05230 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain RK88_RS05230 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily RK88_RS05230 IPR019991 GTP-binding protein, ribosome biogenesis RK88_RS05230 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05240 IPR018257 Ribosomal protein L19, conserved site RK88_RS05240 IPR008991 Translation protein SH3-like domain superfamily RK88_RS05240 IPR038657 Ribosomal protein L19 superfamily RK88_RS05240 IPR001857 Ribosomal protein L19 RK88_RS05245 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain RK88_RS05245 IPR029028 Alpha/beta knot methyltransferases RK88_RS05245 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria RK88_RS05245 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal RK88_RS05245 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK88_RS05250 IPR009000 Translation protein, beta-barrel domain superfamily RK88_RS05250 IPR002676 RimM, N-terminal RK88_RS05250 IPR011033 PRC-barrel-like superfamily RK88_RS05250 IPR027275 PRC-barrel domain RK88_RS05250 IPR011961 16S rRNA processing protein RimM RK88_RS05250 IPR036976 RimM, N-terminal domain superfamily RK88_RS05255 IPR000307 Ribosomal protein S16 RK88_RS05255 IPR023803 Ribosomal protein S16 domain superfamily RK88_RS05260 IPR004125 Signal recognition particle, SRP54 subunit, M-domain RK88_RS05260 IPR003593 AAA+ ATPase domain RK88_RS05260 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05260 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily RK88_RS05260 IPR022941 Signal recognition particle, SRP54 subunit RK88_RS05260 IPR004780 Signal recognition particle protein RK88_RS05260 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily RK88_RS05260 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RK88_RS05260 IPR013822 Signal recognition particle SRP54, helical bundle RK88_RS05265 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS05265 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like RK88_RS05265 IPR013324 RNA polymerase sigma factor, region 3/4-like RK88_RS05270 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain RK88_RS05270 IPR036225 SRP/SRP receptor, N-terminal RK88_RS05270 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05270 IPR003593 AAA+ ATPase domain RK88_RS05270 IPR013822 Signal recognition particle SRP54, helical bundle RK88_RS05270 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily RK88_RS05270 IPR004390 Signal-recognition particle receptor FtsY RK88_RS05275 IPR011890 Structural maintenance of chromosomes protein, prokaryotic RK88_RS05275 IPR036277 SMCs flexible hinge superfamily RK88_RS05275 IPR010935 SMCs flexible hinge RK88_RS05275 IPR024704 Structural maintenance of chromosomes protein RK88_RS05275 IPR003395 RecF/RecN/SMC, N-terminal RK88_RS05275 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05280 IPR014720 Double-stranded RNA-binding domain RK88_RS05280 IPR011907 Ribonuclease III RK88_RS05280 IPR000999 Ribonuclease III domain RK88_RS05280 IPR036389 Ribonuclease III, endonuclease domain superfamily RK88_RS05285 IPR036736 ACP-like superfamily RK88_RS05285 IPR006162 Phosphopantetheine attachment site RK88_RS05285 IPR009081 Phosphopantetheine binding ACP domain RK88_RS05285 IPR003231 Acyl carrier protein (ACP) RK88_RS05295 IPR002347 Short-chain dehydrogenase/reductase SDR RK88_RS05295 IPR020904 Short-chain dehydrogenase/reductase, conserved site RK88_RS05295 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase RK88_RS05295 IPR036291 NAD(P)-binding domain superfamily RK88_RS05300 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding RK88_RS05300 IPR024925 Malonyl CoA-acyl carrier protein transacylase RK88_RS05300 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase RK88_RS05300 IPR014043 Acyl transferase RK88_RS05300 IPR001227 Acyl transferase domain superfamily RK88_RS05300 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type RK88_RS05305 IPR003664 Fatty acid synthesis PlsX protein RK88_RS05305 IPR012281 Phospholipid biosynthesis protein, PlsX-like RK88_RS05310 IPR029069 HotDog domain superfamily RK88_RS05310 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS05310 IPR017275 Transcription factor FapR RK88_RS05310 IPR006683 Thioesterase domain RK88_RS05315 IPR004609 ATP-dependent DNA helicase RecG RK88_RS05315 IPR011545 DEAD/DEAH box helicase domain RK88_RS05315 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK88_RS05315 IPR001650 Helicase, C-terminal RK88_RS05315 IPR012340 Nucleic acid-binding, OB-fold RK88_RS05315 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05315 IPR033454 RecG, wedge domain RK88_RS05320 IPR036117 DhaL domain superfamily RK88_RS05320 IPR019986 DAK2 domain-containing protein YloV RK88_RS05320 IPR004007 DhaL domain RK88_RS05320 IPR033470 Uncharacterised protein, DhaK domain RK88_RS05325 IPR005531 Alkaline shock protein Asp23 RK88_RS05330 IPR034704 L28p-like RK88_RS05330 IPR001383 Ribosomal protein L28 RK88_RS05330 IPR037147 Ribosomal protein L28/L24 superfamily RK88_RS05330 IPR026569 Ribosomal protein L28/L24 RK88_RS05340 IPR011060 Ribulose-phosphate binding barrel RK88_RS05340 IPR000056 Ribulose-phosphate 3-epimerase-like RK88_RS05340 IPR026019 Ribulose-phosphate 3-epimerase RK88_RS05340 IPR013785 Aldolase-type TIM barrel RK88_RS05345 IPR004881 Ribosome biogenesis GTPase RsgA RK88_RS05345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05345 IPR010914 RsgA GTPase domain RK88_RS05345 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal RK88_RS05345 IPR012340 Nucleic acid-binding, OB-fold RK88_RS05345 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain RK88_RS05350 IPR011009 Protein kinase-like domain superfamily RK88_RS05350 IPR005543 PASTA domain RK88_RS05350 IPR000719 Protein kinase domain RK88_RS05350 IPR017441 Protein kinase, ATP binding site RK88_RS05350 IPR008271 Serine/threonine-protein kinase, active site RK88_RS05355 IPR015655 Protein phosphatase 2C family RK88_RS05355 IPR036457 PPM-type phosphatase domain superfamily RK88_RS05355 IPR001932 PPM-type phosphatase domain RK88_RS05360 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr RK88_RS05360 IPR013785 Aldolase-type TIM barrel RK88_RS05360 IPR007197 Radical SAM RK88_RS05360 IPR040072 Methyltransferase (Class A) RK88_RS05360 IPR027492 Dual-specificity RNA methyltransferase RlmN RK88_RS05365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS05365 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site RK88_RS05365 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type RK88_RS05365 IPR004573 rRNA small subunit methyltransferase B RK88_RS05365 IPR035926 NusB-like superfamily RK88_RS05365 IPR006027 NusB/RsmB/TIM44 RK88_RS05365 IPR023267 RNA (C5-cytosine) methyltransferase RK88_RS05370 IPR005794 Methionyl-tRNA formyltransferase RK88_RS05370 IPR005793 Formyl transferase, C-terminal RK88_RS05370 IPR037022 Formyl transferase, C-terminal domain superfamily RK88_RS05370 IPR002376 Formyl transferase, N-terminal RK88_RS05370 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain RK88_RS05370 IPR011034 Formyl transferase-like, C-terminal domain superfamily RK88_RS05370 IPR001555 Phosphoribosylglycinamide formyltransferase, active site RK88_RS05370 IPR036477 Formyl transferase, N-terminal domain superfamily RK88_RS05375 IPR036821 Peptide deformylase superfamily RK88_RS05375 IPR023635 Peptide deformylase RK88_RS05380 IPR007829 TM2 domain RK88_RS05390 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK88_RS05390 IPR006935 Helicase/UvrB, N-terminal RK88_RS05390 IPR005259 Primosomal protein N' RK88_RS05390 IPR041222 Primosomal protein N', 3' DNA-binding domain RK88_RS05390 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily RK88_RS05390 IPR001650 Helicase, C-terminal RK88_RS05390 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain RK88_RS05390 IPR041236 Primosomal protein N, C-terminal domain RK88_RS05390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05395 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal RK88_RS05395 IPR003382 Flavoprotein RK88_RS05395 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC RK88_RS05395 IPR036551 Flavin prenyltransferase-like RK88_RS05395 IPR035929 CoaB-like superfamily RK88_RS05400 IPR003716 DNA-directed RNA polymerase, omega subunit RK88_RS05400 IPR006110 RNA polymerase, subunit omega/K/RPB6 RK88_RS05400 IPR012293 RNA polymerase subunit, RPB6/omega RK88_RS05400 IPR036161 RPB6/omega subunit-like superfamily RK88_RS05405 IPR020590 Guanylate kinase, conserved site RK88_RS05405 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05405 IPR017665 Guanylate kinase RK88_RS05405 IPR008144 Guanylate kinase-like domain RK88_RS05405 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RK88_RS05410 IPR008532 NFACT, RNA-binding domain RK88_RS05425 IPR023031 Orotate phosphoribosyltransferase RK88_RS05425 IPR004467 Orotate phosphoribosyl transferase domain RK88_RS05425 IPR000836 Phosphoribosyltransferase domain RK88_RS05425 IPR029057 Phosphoribosyltransferase-like RK88_RS05430 IPR018089 Orotidine 5'-phosphate decarboxylase, active site RK88_RS05430 IPR014732 Orotidine 5'-phosphate decarboxylase RK88_RS05430 IPR001754 Orotidine 5'-phosphate decarboxylase domain RK88_RS05430 IPR013785 Aldolase-type TIM barrel RK88_RS05430 IPR011060 Ribulose-phosphate binding barrel RK88_RS05435 IPR036914 Methylglyoxal synthase-like domain superfamily RK88_RS05435 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain RK88_RS05435 IPR006275 Carbamoyl-phosphate synthase, large subunit RK88_RS05435 IPR016185 Pre-ATP-grasp domain superfamily RK88_RS05435 IPR011607 Methylglyoxal synthase-like domain RK88_RS05435 IPR011761 ATP-grasp fold RK88_RS05435 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain RK88_RS05435 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily RK88_RS05435 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain RK88_RS05435 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RK88_RS05440 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain RK88_RS05440 IPR029062 Class I glutamine amidotransferase-like RK88_RS05440 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily RK88_RS05440 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain RK88_RS05440 IPR006274 Carbamoyl-phosphate synthase, small subunit RK88_RS05440 IPR017926 Glutamine amidotransferase RK88_RS05445 IPR011059 Metal-dependent hydrolase, composite domain superfamily RK88_RS05445 IPR006680 Amidohydrolase-related RK88_RS05445 IPR002195 Dihydroorotase, conserved site RK88_RS05445 IPR004722 Dihydroorotase RK88_RS05445 IPR032466 Metal-dependent hydrolase RK88_RS05450 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RK88_RS05450 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily RK88_RS05450 IPR002082 Aspartate carbamoyltransferase RK88_RS05450 IPR006130 Aspartate/ornithine carbamoyltransferase RK88_RS05450 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RK88_RS05455 IPR029935 Uracil permease RK88_RS05455 IPR006042 Xanthine/uracil permease RK88_RS05455 IPR006043 Xanthine/uracil/vitamin C permease RK88_RS05460 IPR000836 Phosphoribosyltransferase domain RK88_RS05460 IPR029057 Phosphoribosyltransferase-like RK88_RS05460 IPR023050 Bifunctional protein PyrR RK88_RS05465 IPR006225 Pseudouridine synthase, RluC/RluD RK88_RS05465 IPR020103 Pseudouridine synthase, catalytic domain superfamily RK88_RS05465 IPR036986 RNA-binding S4 domain superfamily RK88_RS05465 IPR002942 RNA-binding S4 domain RK88_RS05465 IPR006145 Pseudouridine synthase, RsuA/RluA RK88_RS05465 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RK88_RS05470 IPR001872 Peptidase A8, signal peptidase II RK88_RS05475 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II RK88_RS05475 IPR037523 Vicinal oxygen chelate (VOC) domain RK88_RS05475 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK88_RS05475 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK88_RS05485 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS05485 IPR023585 Isoleucine-tRNA ligase, type 1 RK88_RS05485 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RK88_RS05485 IPR002300 Aminoacyl-tRNA synthetase, class Ia RK88_RS05485 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RK88_RS05485 IPR002301 Isoleucine-tRNA ligase RK88_RS05485 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RK88_RS05485 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain RK88_RS05485 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain RK88_RS05485 IPR010663 Zinc finger, FPG/IleRS-type RK88_RS05490 IPR019933 DivIVA domain RK88_RS05490 IPR007793 DivIVA family RK88_RS05495 IPR040591 YlmH, putative RNA-binding domain RK88_RS05495 IPR036986 RNA-binding S4 domain superfamily RK88_RS05495 IPR002942 RNA-binding S4 domain RK88_RS05495 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily RK88_RS05500 IPR003425 CCB3/YggT RK88_RS05505 IPR007561 Cell division protein SepF/SepF-related RK88_RS05505 IPR038594 SepF-like superfamily RK88_RS05505 IPR023052 Cell division protein SepF RK88_RS05510 IPR001608 Alanine racemase, N-terminal RK88_RS05510 IPR029066 PLP-binding barrel RK88_RS05510 IPR011078 Pyridoxal phosphate homeostasis protein RK88_RS05520 IPR003008 Tubulin/FtsZ, GTPase domain RK88_RS05520 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain RK88_RS05520 IPR036525 Tubulin/FtsZ, GTPase domain superfamily RK88_RS05520 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily RK88_RS05520 IPR008280 Tubulin/FtsZ, C-terminal RK88_RS05520 IPR024757 Cell division protein FtsZ, C-terminal RK88_RS05520 IPR020805 Cell division protein FtsZ, conserved site RK88_RS05520 IPR000158 Cell division protein FtsZ RK88_RS05525 IPR020823 Cell division protein FtsA RK88_RS05525 IPR003494 SHS2 domain inserted in FtsA RK88_RS05530 IPR034746 POTRA domain RK88_RS05530 IPR005548 Cell division protein FtsQ/DivIB RK88_RS05530 IPR013685 POTRA domain, FtsQ-type RK88_RS05530 IPR026580 Cell division protein DivIB RK88_RS05535 IPR036565 Mur-like, catalytic domain superfamily RK88_RS05535 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase RK88_RS05535 IPR004101 Mur ligase, C-terminal RK88_RS05535 IPR036615 Mur ligase, C-terminal domain superfamily RK88_RS05535 IPR013221 Mur ligase, central RK88_RS05540 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase RK88_RS05540 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RK88_RS05540 IPR000715 Glycosyl transferase, family 4 RK88_RS05550 IPR011922 Cell division protein FtsL RK88_RS05550 IPR007060 Septum formation initiator FtsL/DivIC RK88_RS05555 IPR002903 Ribosomal RNA small subunit methyltransferase H RK88_RS05555 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS05555 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily RK88_RS05560 IPR038619 MraZ superfamily RK88_RS05560 IPR020603 MraZ domain RK88_RS05560 IPR035644 MraZ, C-terminal RK88_RS05560 IPR007159 SpoVT-AbrB domain RK88_RS05560 IPR037914 SpoVT-AbrB domain superfamily RK88_RS05560 IPR003444 Transcriptional regulator MraZ RK88_RS05560 IPR035642 MraZ, N-terminal RK88_RS05565 IPR011199 Bacillithiol biosynthesis BshC RK88_RS05570 IPR017274 Putative N-acetyltransferase YlbP RK88_RS05570 IPR000182 GNAT domain RK88_RS05570 IPR016181 Acyl-CoA N-acyltransferase RK88_RS05575 IPR036412 HAD-like superfamily RK88_RS05575 IPR006439 HAD hydrolase, subfamily IA RK88_RS05575 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB RK88_RS05575 IPR041492 Haloacid dehalogenase-like hydrolase RK88_RS05575 IPR023214 HAD superfamily RK88_RS05575 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RK88_RS05580 IPR008846 Staphylococcal hemolytic protein family RK88_RS05605 IPR018385 C4-dicarboxylate anaerobic carrier-like RK88_RS05610 IPR003964 Carbamate kinase RK88_RS05610 IPR001048 Aspartate/glutamate/uridylate kinase RK88_RS05610 IPR036393 Acetylglutamate kinase-like superfamily RK88_RS05615 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily RK88_RS05615 IPR006130 Aspartate/ornithine carbamoyltransferase RK88_RS05615 IPR024904 Ornithine carbamoyltransferase RK88_RS05615 IPR002292 Ornithine/putrescine carbamoyltransferase RK88_RS05615 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RK88_RS05615 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RK88_RS05620 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS05620 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS05620 IPR016091 Superantigen toxin, C-terminal RK88_RS05620 IPR008375 Staphylococcus aureus exotoxin RK88_RS05620 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS05625 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS05625 IPR016091 Superantigen toxin, C-terminal RK88_RS05625 IPR008375 Staphylococcus aureus exotoxin RK88_RS05625 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS05625 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS05630 IPR016091 Superantigen toxin, C-terminal RK88_RS05630 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS05630 IPR008375 Staphylococcus aureus exotoxin RK88_RS05630 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS05630 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS05675 IPR021612 Staphylococcal complement inhibitor SCIN RK88_RS05675 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily RK88_RS05680 IPR041909 Sbi, C3 binding domain IV RK88_RS05680 IPR021033 Extracellular fibrinogen binding protein, C-terminal RK88_RS05680 IPR036233 Efb, C-terminal domain superfamily RK88_RS05690 IPR023253 FPRL1/chemotaxis inhibitory protein RK88_RS05690 IPR023256 FPRL1 inhibitory protein RK88_RS05715 IPR020922 dITP/XTP pyrophosphatase RK88_RS05715 IPR029001 Inosine triphosphate pyrophosphatase-like RK88_RS05715 IPR002637 Ham1-like protein RK88_RS05720 IPR033134 Asp/Glu racemase, active site 2 RK88_RS05720 IPR015942 Asp/Glu/hydantoin racemase RK88_RS05720 IPR001920 Asp/Glu racemase RK88_RS05720 IPR018187 Asp/Glu racemase, active site 1 RK88_RS05720 IPR004391 Glutamate racemase RK88_RS05725 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RK88_RS05725 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RK88_RS05725 IPR036010 2Fe-2S ferredoxin-like superfamily RK88_RS05725 IPR012675 Beta-grasp domain superfamily RK88_RS05725 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein RK88_RS05725 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal RK88_RS05725 IPR009051 Alpha-helical ferredoxin RK88_RS05730 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain RK88_RS05730 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS05730 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily RK88_RS05730 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily RK88_RS05730 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site RK88_RS05730 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal RK88_RS05730 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria RK88_RS05735 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit RK88_RS05735 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute RK88_RS05735 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit RK88_RS05735 IPR011138 Succinate dehydrogenase cytochrome b558 subunit RK88_RS05740 IPR000305 GIY-YIG endonuclease RK88_RS05740 IPR010994 RuvA domain 2-like RK88_RS05740 IPR001943 UVR domain RK88_RS05740 IPR036876 UVR domain superfamily RK88_RS05740 IPR004791 UvrABC system, subunit C RK88_RS05740 IPR001162 UvrC family homology region RK88_RS05740 IPR038476 UvrC homology region 2 superfamily RK88_RS05740 IPR035901 GIY-YIG endonuclease superfamily RK88_RS05750 IPR013766 Thioredoxin domain RK88_RS05750 IPR017937 Thioredoxin, conserved site RK88_RS05750 IPR005746 Thioredoxin RK88_RS05750 IPR036249 Thioredoxin-like superfamily RK88_RS05755 IPR002625 Smr domain RK88_RS05755 IPR036063 Smr domain superfamily RK88_RS05755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS05755 IPR007696 DNA mismatch repair protein MutS, core RK88_RS05755 IPR036187 DNA mismatch repair protein MutS, core domain superfamily RK88_RS05755 IPR000432 DNA mismatch repair protein MutS, C-terminal RK88_RS05755 IPR005747 Endonuclease MutS2 RK88_RS05760 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 RK88_RS05760 IPR004013 PHP domain RK88_RS05760 IPR003141 Polymerase/histidinol phosphatase, N-terminal RK88_RS05760 IPR016195 Polymerase/histidinol phosphatase-like RK88_RS05760 IPR037160 DNA polymerase, thumb domain superfamily RK88_RS05760 IPR029398 DNA polymerase beta, thumb domain RK88_RS05760 IPR027421 DNA polymerase lambda lyase domain superfamily RK88_RS05760 IPR010996 DNA polymerase beta-like, N-terminal domain RK88_RS05760 IPR022311 Uncharacterised conserved protein UCP005047, YshC RK88_RS05760 IPR002054 DNA-directed DNA polymerase X RK88_RS05770 IPR023688 Cell division protein ZapA, firmicutes RK88_RS05770 IPR036192 Cell division protein ZapA-like superfamily RK88_RS05770 IPR007838 Cell division protein ZapA-like RK88_RS05775 IPR024568 Ribonuclease HIII, N-terminal RK88_RS05775 IPR024567 Ribonuclease HII/HIII domain RK88_RS05775 IPR036397 Ribonuclease H superfamily RK88_RS05775 IPR012337 Ribonuclease H-like superfamily RK88_RS05775 IPR004641 Ribonuclease HIII RK88_RS05775 IPR012295 TBP domain superfamily RK88_RS05775 IPR001352 Ribonuclease HII/HIII RK88_RS05785 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain RK88_RS05785 IPR002547 tRNA-binding domain RK88_RS05785 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily RK88_RS05785 IPR005121 Ferrodoxin-fold anticodon-binding domain RK88_RS05785 IPR009061 Putative DNA-binding domain superfamily RK88_RS05785 IPR005147 tRNA synthetase, B5-domain RK88_RS05785 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain RK88_RS05785 IPR005146 B3/B4 tRNA-binding domain RK88_RS05785 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RK88_RS05785 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit RK88_RS05785 IPR012340 Nucleic acid-binding, OB-fold RK88_RS05790 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RK88_RS05790 IPR006195 Aminoacyl-tRNA synthetase, class II RK88_RS05790 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit RK88_RS05790 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal RK88_RS05790 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial RK88_RS05790 IPR002319 Phenylalanyl-tRNA synthetase RK88_RS05795 IPR029064 50S ribosomal protein L30e-like RK88_RS05795 IPR001537 tRNA/rRNA methyltransferase, SpoU type RK88_RS05795 IPR029028 Alpha/beta knot methyltransferases RK88_RS05795 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RK88_RS05795 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK88_RS05800 IPR012337 Ribonuclease H-like superfamily RK88_RS05800 IPR001584 Integrase, catalytic core RK88_RS05800 IPR025246 Transposase IS30-like HTH domain RK88_RS05800 IPR036397 Ribonuclease H superfamily RK88_RS05800 IPR001598 Transposase, IS30, conserved site RK88_RS05810 IPR023953 Heme oxygenase IsdG RK88_RS05810 IPR011008 Dimeric alpha-beta barrel RK88_RS05810 IPR007138 Antibiotic biosynthesis monooxygenase domain RK88_RS05815 IPR009835 Sortase B family RK88_RS05815 IPR005754 Sortase family RK88_RS05815 IPR015986 Sortase B, Firmicutes RK88_RS05815 IPR023365 Sortase domain superfamily RK88_RS05820 IPR000522 ABC transporter, permease protein, BtuC-like RK88_RS05820 IPR037294 ABC transporter, BtuC-like RK88_RS05825 IPR002491 ABC transporter periplasmic binding domain RK88_RS05825 IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE RK88_RS05835 IPR037250 NEAT domain superfamily RK88_RS05835 IPR019909 Haem uptake protein IsdC RK88_RS05835 IPR006635 NEAT domain RK88_RS05835 IPR017505 Sortase B signal domain, NPQTN class RK88_RS05840 IPR019948 Gram-positive LPXTG cell wall anchor RK88_RS05840 IPR037250 NEAT domain superfamily RK88_RS05840 IPR019931 LPXTG cell wall anchor domain RK88_RS05840 IPR006635 NEAT domain RK88_RS05845 IPR019931 LPXTG cell wall anchor domain RK88_RS05845 IPR006635 NEAT domain RK88_RS05845 IPR037250 NEAT domain superfamily RK88_RS05845 IPR005877 YSIRK Gram-positive signal peptide RK88_RS05845 IPR019929 Iron-regulated surface determinant protein IsdB RK88_RS05845 IPR019948 Gram-positive LPXTG cell wall anchor RK88_RS05850 IPR002677 Ribosomal protein L32p RK88_RS05850 IPR011332 Zinc-binding ribosomal protein RK88_RS05865 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS05865 IPR008513 tRNA(Met) cytidine acetate ligase RK88_RS05870 IPR004821 Cytidyltransferase-like domain RK88_RS05870 IPR001980 Phosphopantetheine adenylyltransferase RK88_RS05870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS05875 IPR004398 RNA methyltransferase, RsmD RK88_RS05875 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS05885 IPR016979 Protein of unknown function DUF2129 RK88_RS05890 IPR030395 Glycerophosphodiester phosphodiesterase domain RK88_RS05890 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily RK88_RS05895 IPR023378 YheA/YmcA-like domain superfamily RK88_RS05895 IPR010368 Control of competence regulator ComK, YlbF/YmcA RK88_RS05900 IPR035940 CAP superfamily RK88_RS05900 IPR014044 CAP domain RK88_RS05900 IPR029410 CAP-associated domain RK88_RS05915 IPR006369 Protohaem IX farnesyltransferase RK88_RS05915 IPR000537 UbiA prenyltransferase family RK88_RS05920 IPR023755 Heme A synthase, type 1 RK88_RS05920 IPR003780 COX15/CtaA family RK88_RS05925 IPR005930 Pyruvate carboxylase RK88_RS05925 IPR011761 ATP-grasp fold RK88_RS05925 IPR011053 Single hybrid motif RK88_RS05925 IPR011054 Rudiment single hybrid motif RK88_RS05925 IPR011764 Biotin carboxylation domain RK88_RS05925 IPR013785 Aldolase-type TIM barrel RK88_RS05925 IPR016185 Pre-ATP-grasp domain superfamily RK88_RS05925 IPR000891 Pyruvate carboxyltransferase RK88_RS05925 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain RK88_RS05925 IPR005481 Biotin carboxylase-like, N-terminal domain RK88_RS05925 IPR003379 Carboxylase, conserved domain RK88_RS05925 IPR000089 Biotin/lipoyl attachment RK88_RS05925 IPR005482 Biotin carboxylase, C-terminal RK88_RS05930 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA RK88_RS05930 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site RK88_RS05935 IPR036270 UPF0358 superfamily RK88_RS05935 IPR009983 Uncharacterised protein family UPF0358 RK88_RS05960 IPR020583 Inositol monophosphatase, metal-binding site RK88_RS05960 IPR000760 Inositol monophosphatase-like RK88_RS05960 IPR020550 Inositol monophosphatase, conserved site RK88_RS05965 IPR009403 Protein of unknown function UPF0637 RK88_RS05970 IPR001046 NRAMP family RK88_RS05985 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein RK88_RS05985 IPR006059 Bacterial extracellular solute-binding protein RK88_RS05990 IPR035906 MetI-like superfamily RK88_RS05990 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS05995 IPR035906 MetI-like superfamily RK88_RS05995 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS06000 IPR013611 Transport-associated OB, type 2 RK88_RS06000 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA RK88_RS06000 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS06000 IPR008995 Molybdate/tungstate binding, C-terminal RK88_RS06000 IPR017871 ABC transporter, conserved site RK88_RS06000 IPR003439 ABC transporter-like RK88_RS06000 IPR003593 AAA+ ATPase domain RK88_RS06010 IPR007920 Protein of unknown function UPF0223 RK88_RS06010 IPR023324 BH2638-like superfamily RK88_RS06015 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RK88_RS06015 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RK88_RS06015 IPR023753 FAD/NAD(P)-binding domain RK88_RS06015 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RK88_RS06015 IPR006258 Dihydrolipoamide dehydrogenase RK88_RS06015 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RK88_RS06015 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS06020 IPR011053 Single hybrid motif RK88_RS06020 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RK88_RS06020 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain RK88_RS06020 IPR000089 Biotin/lipoyl attachment RK88_RS06020 IPR004167 Peripheral subunit-binding domain RK88_RS06020 IPR036625 E3-binding domain superfamily RK88_RS06020 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RK88_RS06025 IPR029061 Thiamin diphosphate-binding fold RK88_RS06025 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II RK88_RS06025 IPR033248 Transketolase, C-terminal domain RK88_RS06025 IPR005475 Transketolase-like, pyrimidine-binding domain RK88_RS06030 IPR029061 Thiamin diphosphate-binding fold RK88_RS06030 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha RK88_RS06030 IPR001017 Dehydrogenase, E1 component RK88_RS06040 IPR023635 Peptide deformylase RK88_RS06040 IPR036821 Peptide deformylase superfamily RK88_RS06055 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RK88_RS06055 IPR030854 Ribonuclease J, bacteria RK88_RS06055 IPR042173 Ribonuclease J, domain 2 RK88_RS06055 IPR001587 Ribonuclease J, conserved site RK88_RS06055 IPR004613 Ribonuclease J RK88_RS06055 IPR041636 Ribonuclease J, C-terminal RK88_RS06055 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RK88_RS06055 IPR001279 Metallo-beta-lactamase RK88_RS06065 IPR006037 Regulator of K+ conductance, C-terminal RK88_RS06065 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily RK88_RS06065 IPR003148 Regulator of K+ conductance, N-terminal RK88_RS06065 IPR036291 NAD(P)-binding domain superfamily RK88_RS06070 IPR003317 Cytochrome ubiquinol oxidase subunit 2 RK88_RS06075 IPR002585 Cytochrome ubiquinol oxidase subunit 1 RK88_RS06085 IPR040442 Pyruvate kinase-like domain superfamily RK88_RS06085 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RK88_RS06085 IPR036618 PtsI, HPr-binding domain superfamily RK88_RS06085 IPR006318 Phosphotransferase system, enzyme I-like RK88_RS06085 IPR024692 Phosphotransferase system, enzyme I RK88_RS06085 IPR036637 Phosphohistidine domain superfamily RK88_RS06085 IPR000121 PEP-utilising enzyme, C-terminal RK88_RS06085 IPR018274 PEP-utilising enzyme, active site RK88_RS06085 IPR008279 PEP-utilising enzyme, mobile domain RK88_RS06085 IPR008731 Phosphotransferase system, enzyme I N-terminal RK88_RS06085 IPR023151 PEP-utilising enzyme, conserved site RK88_RS06090 IPR000032 Phosphocarrier protein HPr-like RK88_RS06090 IPR035895 HPr-like superfamily RK88_RS06090 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RK88_RS06090 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RK88_RS06100 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS06100 IPR019614 S-adenosylmethionine-dependent methyltransferase RK88_RS06100 IPR041532 RlmI, PUA-like domain RK88_RS06100 IPR036974 PUA domain superfamily RK88_RS06100 IPR015947 PUA-like superfamily RK88_RS06100 IPR002478 PUA domain RK88_RS06120 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted RK88_RS06125 IPR003593 AAA+ ATPase domain RK88_RS06125 IPR017871 ABC transporter, conserved site RK88_RS06125 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS06125 IPR003439 ABC transporter-like RK88_RS06130 IPR024919 ECF transporter transmembrane protein EcfT RK88_RS06130 IPR003339 ABC/ECF transporter, transmembrane component RK88_RS06140 IPR000115 Phosphoribosylglycinamide synthetase RK88_RS06140 IPR011054 Rudiment single hybrid motif RK88_RS06140 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal RK88_RS06140 IPR020559 Phosphoribosylglycinamide synthetase, conserved site RK88_RS06140 IPR020560 Phosphoribosylglycinamide synthetase, C-domain RK88_RS06140 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily RK88_RS06140 IPR016185 Pre-ATP-grasp domain superfamily RK88_RS06140 IPR013815 ATP-grasp fold, subdomain 1 RK88_RS06140 IPR011761 ATP-grasp fold RK88_RS06140 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RK88_RS06145 IPR024051 AICAR transformylase, duplicated domain superfamily RK88_RS06145 IPR016193 Cytidine deaminase-like RK88_RS06145 IPR002695 Bifunctional purine biosynthesis protein PurH-like RK88_RS06145 IPR036914 Methylglyoxal synthase-like domain superfamily RK88_RS06145 IPR011607 Methylglyoxal synthase-like domain RK88_RS06150 IPR002376 Formyl transferase, N-terminal RK88_RS06150 IPR036477 Formyl transferase, N-terminal domain superfamily RK88_RS06150 IPR004607 Phosphoribosylglycinamide formyltransferase RK88_RS06155 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase RK88_RS06155 IPR036676 PurM-like, C-terminal domain superfamily RK88_RS06155 IPR016188 PurM-like, N-terminal domain RK88_RS06155 IPR036921 PurM-like, N-terminal domain superfamily RK88_RS06155 IPR010918 PurM-like, C-terminal domain RK88_RS06160 IPR017932 Glutamine amidotransferase type 2 domain RK88_RS06160 IPR000836 Phosphoribosyltransferase domain RK88_RS06160 IPR029057 Phosphoribosyltransferase-like RK88_RS06160 IPR005854 Amidophosphoribosyltransferase RK88_RS06160 IPR035584 Amidophosphoribosyltransferase, N-terminal RK88_RS06160 IPR029055 Nucleophile aminohydrolases, N-terminal RK88_RS06165 IPR010074 Phosphoribosylformylglycinamidine subunit PurL RK88_RS06165 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain RK88_RS06165 IPR010918 PurM-like, C-terminal domain RK88_RS06165 IPR036676 PurM-like, C-terminal domain superfamily RK88_RS06165 IPR016188 PurM-like, N-terminal domain RK88_RS06165 IPR036921 PurM-like, N-terminal domain superfamily RK88_RS06170 IPR017926 Glutamine amidotransferase RK88_RS06170 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ RK88_RS06170 IPR029062 Class I glutamine amidotransferase-like RK88_RS06175 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS RK88_RS06175 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily RK88_RS06180 IPR028923 SAICAR synthetase/ADE2, N-terminal RK88_RS06180 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase RK88_RS06180 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase RK88_RS06180 IPR018236 SAICAR synthetase, conserved site RK88_RS06185 IPR011054 Rudiment single hybrid motif RK88_RS06185 IPR011761 ATP-grasp fold RK88_RS06185 IPR013815 ATP-grasp fold, subdomain 1 RK88_RS06185 IPR016185 Pre-ATP-grasp domain superfamily RK88_RS06185 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RK88_RS06185 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit RK88_RS06185 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain RK88_RS06190 IPR024694 PurE, prokaryotic type RK88_RS06190 IPR033747 Class I PurE RK88_RS06190 IPR000031 PurE domain RK88_RS06190 IPR035893 PurE domain superfamily RK88_RS06195 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RK88_RS06195 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RK88_RS06195 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase RK88_RS06195 IPR036291 NAD(P)-binding domain superfamily RK88_RS06215 IPR006332 Quinol oxidase subunit II RK88_RS06215 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain RK88_RS06215 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain RK88_RS06215 IPR008972 Cupredoxin RK88_RS06215 IPR002429 Cytochrome c oxidase subunit II-like C-terminal RK88_RS06215 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily RK88_RS06220 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RK88_RS06220 IPR014233 Quinol oxidase subunit I RK88_RS06220 IPR023616 Cytochrome c oxidase-like, subunit I domain RK88_RS06220 IPR036927 Cytochrome c oxidase-like, subunit I superfamily RK88_RS06220 IPR000883 Cytochrome c oxidase subunit I RK88_RS06225 IPR024791 Cytochrome c oxidase subunit III RK88_RS06225 IPR014246 Quinol oxidase subunit III RK88_RS06225 IPR033946 Ubiquinol oxidase subunit III domain RK88_RS06225 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle RK88_RS06225 IPR035973 Cytochrome c oxidase subunit III-like superfamily RK88_RS06225 IPR000298 Cytochrome c oxidase subunit III-like RK88_RS06230 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes RK88_RS06230 IPR014250 Quinol oxidase subunit IV RK88_RS06235 IPR012338 Beta-lactamase/transpeptidase-like RK88_RS06235 IPR001466 Beta-lactamase-related RK88_RS06240 IPR004474 Cell envelope-related transcriptional attenuator domain RK88_RS06245 IPR024469 Protein of unknown function DUF2538 RK88_RS06250 IPR039143 Glucosamine 6-phosphate N-acetyltransferase RK88_RS06250 IPR016181 Acyl-CoA N-acyltransferase RK88_RS06250 IPR000182 GNAT domain RK88_RS06255 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain RK88_RS06255 IPR038200 GW domain superfamily RK88_RS06255 IPR025987 GW domain RK88_RS06255 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily RK88_RS06255 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RK88_RS06270 IPR002656 Acyltransferase 3 RK88_RS06275 IPR004839 Aminotransferase, class I/classII RK88_RS06275 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS06275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS06275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS06275 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site RK88_RS06285 IPR000126 Serine proteases, V8 family, serine active site RK88_RS06285 IPR028301 Serine proteases, V8 family, histidine active site RK88_RS06285 IPR008353 Peptidase S1B, exfoliative toxin RK88_RS06285 IPR008256 Peptidase S1B RK88_RS06285 IPR009003 Peptidase S1, PA clan RK88_RS06290 IPR037155 Staphopain proregion superfamily RK88_RS06290 IPR008750 Staphopain peptidase C47 RK88_RS06290 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS06290 IPR028076 Staphopain proregion RK88_RS06295 IPR016085 Protease inhibitor, beta-barrel domain RK88_RS06295 IPR015113 Staphostatin B RK88_RS06295 IPR037296 Staphostatin A/B RK88_RS06300 IPR029045 ClpP/crotonase-like domain superfamily RK88_RS06300 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB RK88_RS06300 IPR001753 Enoyl-CoA hydratase/isomerase RK88_RS06300 IPR014748 Enoyl-CoA hydratase, C-terminal RK88_RS06305 IPR029058 Alpha/Beta hydrolase fold RK88_RS06305 IPR000073 Alpha/beta hydrolase fold-1 RK88_RS06305 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase RK88_RS06310 IPR032264 Menaquinone biosynthesis protein MenD, middle domain RK88_RS06310 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase RK88_RS06310 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RK88_RS06310 IPR029061 Thiamin diphosphate-binding fold RK88_RS06310 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RK88_RS06315 IPR034681 Isochorismate synthase MenF RK88_RS06315 IPR015890 Chorismate-utilising enzyme, C-terminal RK88_RS06315 IPR005801 ADC synthase RK88_RS06315 IPR004561 Isochorismate synthase RK88_RS06325 IPR026046 UbiA prenyltransferase domain containing protein 1 RK88_RS06325 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase RK88_RS06325 IPR000537 UbiA prenyltransferase family RK88_RS06330 IPR016181 Acyl-CoA N-acyltransferase RK88_RS06330 IPR000182 GNAT domain RK88_RS06330 IPR006464 N-acetyltransferase RimI/Ard1 RK88_RS06335 IPR007829 TM2 domain RK88_RS06345 IPR002491 ABC transporter periplasmic binding domain RK88_RS06355 IPR001296 Glycosyl transferase, family 1 RK88_RS06405 IPR018690 Protein of unknown function DUF2187 RK88_RS06410 IPR019491 Lipoate protein ligase, C-terminal RK88_RS06410 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RK88_RS06410 IPR004562 Lipoyltransferase/lipoate-protein ligase RK88_RS06420 IPR010461 Competence protein ComK RK88_RS06435 IPR008334 5'-Nucleotidase, C-terminal RK88_RS06435 IPR029052 Metallo-dependent phosphatase-like RK88_RS06435 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase RK88_RS06435 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RK88_RS06435 IPR041827 CpdB, N-terminal metallophosphatase domain RK88_RS06435 IPR036907 5'-Nucleotidase, C-terminal domain superfamily RK88_RS06435 IPR006146 5'-Nucleotidase, conserved site RK88_RS06435 IPR006179 5'-Nucleotidase/apyrase RK88_RS06440 IPR003445 Cation transporter RK88_RS06445 IPR036034 PDZ superfamily RK88_RS06445 IPR009003 Peptidase S1, PA clan RK88_RS06445 IPR001940 Peptidase S1C RK88_RS06445 IPR001478 PDZ domain RK88_RS06450 IPR022493 Integral membrane YkoY RK88_RS06450 IPR036259 MFS transporter superfamily RK88_RS06450 IPR005496 Integral membrane protein TerC RK88_RS06455 IPR035647 EF-G domain III/V-like RK88_RS06455 IPR031157 Tr-type G domain, conserved site RK88_RS06455 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS06455 IPR004161 Translation elongation factor EFTu-like, domain 2 RK88_RS06455 IPR004548 Peptide chain release factor 3 RK88_RS06455 IPR041732 Peptide chain release factor 3, GTP-binding domain RK88_RS06455 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily RK88_RS06455 IPR005225 Small GTP-binding protein domain RK88_RS06455 IPR000795 Transcription factor, GTP-binding domain RK88_RS06455 IPR009000 Translation protein, beta-barrel domain superfamily RK88_RS06455 IPR032090 Peptide chain release factor 3, C-terminal RK88_RS06465 IPR035911 MurE/MurF, N-terminal RK88_RS06465 IPR000713 Mur ligase, N-terminal catalytic domain RK88_RS06465 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase RK88_RS06465 IPR013221 Mur ligase, central RK88_RS06465 IPR036615 Mur ligase, C-terminal domain superfamily RK88_RS06465 IPR004101 Mur ligase, C-terminal RK88_RS06465 IPR036565 Mur-like, catalytic domain superfamily RK88_RS06470 IPR023589 Processive diacylglycerol beta-glucosyltransferase RK88_RS06470 IPR007235 Glycosyl transferase, family 28, C-terminal RK88_RS06470 IPR009695 Diacylglycerol glucosyltransferase, N-terminal RK88_RS06475 IPR036259 MFS transporter superfamily RK88_RS06475 IPR011701 Major facilitator superfamily RK88_RS06475 IPR020846 Major facilitator superfamily domain RK88_RS06480 IPR009097 Cyclic phosphodiesterase RK88_RS06480 IPR022932 Putative phosphoesterase YjcG RK88_RS06500 IPR001463 Sodium:alanine symporter RK88_RS06505 IPR002549 Transmembrane protein TqsA-like RK88_RS06510 IPR036291 NAD(P)-binding domain superfamily RK88_RS06510 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) RK88_RS06510 IPR002347 Short-chain dehydrogenase/reductase SDR RK88_RS06515 IPR036291 NAD(P)-binding domain superfamily RK88_RS06515 IPR006153 Cation/H+ exchanger RK88_RS06515 IPR038770 Sodium/solute symporter superfamily RK88_RS06515 IPR006037 Regulator of K+ conductance, C-terminal RK88_RS06515 IPR003148 Regulator of K+ conductance, N-terminal RK88_RS06515 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily RK88_RS06520 IPR006668 Magnesium transporter, MgtE intracellular domain RK88_RS06520 IPR038076 MgtE, N-terminal domain superfamily RK88_RS06520 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily RK88_RS06520 IPR006667 SLC41 divalent cation transporters, integral membrane domain RK88_RS06520 IPR006669 Magnesium transporter MgtE RK88_RS06520 IPR000644 CBS domain RK88_RS06520 IPR038048 Magnesium transporter MgtE, transmembrane domain RK88_RS06525 IPR002942 RNA-binding S4 domain RK88_RS06525 IPR006145 Pseudouridine synthase, RsuA/RluA RK88_RS06525 IPR006225 Pseudouridine synthase, RluC/RluD RK88_RS06525 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site RK88_RS06525 IPR020103 Pseudouridine synthase, catalytic domain superfamily RK88_RS06530 IPR002504 NAD kinase RK88_RS06530 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RK88_RS06530 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal RK88_RS06530 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RK88_RS06535 IPR007685 RelA/SpoT RK88_RS06540 IPR020908 Uncharacterised protein family UPF0738 RK88_RS06550 IPR009050 Globin-like superfamily RK88_RS06550 IPR012292 Globin/Protoglobin RK88_RS06550 IPR019795 Globin, bacterial-like, conserved site RK88_RS06550 IPR001486 Truncated hemoglobin RK88_RS06560 IPR013647 Oligopeptidase F, N-terminal domain RK88_RS06560 IPR042088 Oligoendopeptidase F, C-terminal domain RK88_RS06560 IPR004438 Peptidase M3B, oligoendopeptidase F RK88_RS06560 IPR001567 Peptidase M3A/M3B catalytic domain RK88_RS06570 IPR038471 MecA, C-terminal domain superfamily RK88_RS06570 IPR008681 Negative regulator of genetic competence, MecA RK88_RS06575 IPR006504 Transcriptional regulator Spx/MgsR RK88_RS06575 IPR036249 Thioredoxin-like superfamily RK88_RS06575 IPR023731 Regulatory protein Spx RK88_RS06575 IPR006660 Arsenate reductase-like RK88_RS06580 IPR024109 Tryptophan-tRNA ligase, bacterial-type RK88_RS06580 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RK88_RS06580 IPR002305 Aminoacyl-tRNA synthetase, class Ic RK88_RS06580 IPR002306 Tryptophan-tRNA ligase RK88_RS06580 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS06595 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS06595 IPR035906 MetI-like superfamily RK88_RS06595 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RK88_RS06605 IPR003593 AAA+ ATPase domain RK88_RS06605 IPR017871 ABC transporter, conserved site RK88_RS06605 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RK88_RS06605 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS06605 IPR003439 ABC transporter-like RK88_RS06610 IPR003439 ABC transporter-like RK88_RS06610 IPR017871 ABC transporter, conserved site RK88_RS06610 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RK88_RS06610 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS06610 IPR003593 AAA+ ATPase domain RK88_RS06615 IPR000914 Solute-binding protein family 5 domain RK88_RS06615 IPR023765 Solute-binding protein family 5, conserved site RK88_RS06615 IPR039424 Solute-binding protein family 5 RK88_RS06615 IPR030678 Peptide/nickel binding protein, MppA-type RK88_RS06620 IPR036397 Ribonuclease H superfamily RK88_RS06620 IPR001598 Transposase, IS30, conserved site RK88_RS06620 IPR001584 Integrase, catalytic core RK88_RS06620 IPR012337 Ribonuclease H-like superfamily RK88_RS06620 IPR025246 Transposase IS30-like HTH domain RK88_RS06630 IPR030678 Peptide/nickel binding protein, MppA-type RK88_RS06630 IPR000914 Solute-binding protein family 5 domain RK88_RS06630 IPR039424 Solute-binding protein family 5 RK88_RS06630 IPR023765 Solute-binding protein family 5, conserved site RK88_RS06635 IPR003439 ABC transporter-like RK88_RS06635 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RK88_RS06635 IPR017871 ABC transporter, conserved site RK88_RS06635 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS06635 IPR003593 AAA+ ATPase domain RK88_RS06640 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS06640 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RK88_RS06640 IPR017871 ABC transporter, conserved site RK88_RS06640 IPR003593 AAA+ ATPase domain RK88_RS06640 IPR003439 ABC transporter-like RK88_RS06645 IPR035906 MetI-like superfamily RK88_RS06645 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RK88_RS06645 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS06650 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS06650 IPR035906 MetI-like superfamily RK88_RS06660 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 RK88_RS06660 IPR000794 Beta-ketoacyl synthase RK88_RS06660 IPR018201 Beta-ketoacyl synthase, active site RK88_RS06660 IPR014030 Beta-ketoacyl synthase, N-terminal RK88_RS06660 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RK88_RS06660 IPR016039 Thiolase-like RK88_RS06660 IPR014031 Beta-ketoacyl synthase, C-terminal RK88_RS06665 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 RK88_RS06665 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RK88_RS06665 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal RK88_RS06665 IPR016039 Thiolase-like RK88_RS06675 IPR005298 MAP domain RK88_RS06680 IPR008914 Phosphatidylethanolamine-binding protein RK88_RS06680 IPR005247 YbhB/YbcL RK88_RS06680 IPR036610 PEBP-like superfamily RK88_RS06695 IPR013785 Aldolase-type TIM barrel RK88_RS06695 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain RK88_RS06695 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site RK88_RS06695 IPR000891 Pyruvate carboxyltransferase RK88_RS06695 IPR005671 2-isopropylmalate synthase, bacterial-type RK88_RS06695 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily RK88_RS06705 IPR028299 ClpA/B, conserved site 2 RK88_RS06705 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS06705 IPR003593 AAA+ ATPase domain RK88_RS06705 IPR003959 ATPase, AAA-type, core RK88_RS06705 IPR017730 Chaperonin ClpB RK88_RS06705 IPR019489 Clp ATPase, C-terminal RK88_RS06705 IPR036628 Clp, N-terminal domain superfamily RK88_RS06705 IPR004176 Clp, N-terminal RK88_RS06705 IPR001270 ClpA/B family RK88_RS06705 IPR018368 ClpA/B, conserved site 1 RK88_RS06705 IPR041546 ClpA/ClpB, AAA lid domain RK88_RS06710 IPR036514 SGNH hydrolase superfamily RK88_RS06710 IPR002656 Acyltransferase 3 RK88_RS06715 IPR002744 MIP18 family-like RK88_RS06715 IPR034904 Fe-S cluster assembly domain superfamily RK88_RS06720 IPR023214 HAD superfamily RK88_RS06720 IPR006379 HAD-superfamily hydrolase, subfamily IIB RK88_RS06720 IPR036412 HAD-like superfamily RK88_RS06720 IPR000150 Cof family RK88_RS06725 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RK88_RS06725 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RK88_RS06725 IPR023753 FAD/NAD(P)-binding domain RK88_RS06725 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS06725 IPR023536 Coenzyme A disulphide reductase, staphyolococci RK88_RS06725 IPR017758 Coenzyme A disulphide reductase RK88_RS06735 IPR010899 Protein of unknown function UPF0344 RK88_RS06740 IPR011234 Fumarylacetoacetase-like, C-terminal RK88_RS06740 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily RK88_RS06745 IPR014017 UvrD-like DNA helicase, C-terminal RK88_RS06745 IPR034739 UvrD/AddA helicase, N-terminal RK88_RS06745 IPR014152 DNA helicase subunit AddA RK88_RS06745 IPR011335 Restriction endonuclease type II-like RK88_RS06745 IPR014016 UvrD-like helicase, ATP-binding domain RK88_RS06745 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type RK88_RS06745 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS06745 IPR011604 Exonuclease, phage-type/RecB, C-terminal RK88_RS06745 IPR000212 DNA helicase, UvrD/REP type RK88_RS06750 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type RK88_RS06750 IPR014017 UvrD-like DNA helicase, C-terminal RK88_RS06750 IPR014016 UvrD-like helicase, ATP-binding domain RK88_RS06750 IPR000212 DNA helicase, UvrD/REP type RK88_RS06750 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS06750 IPR014140 DNA helicase subunit AddB RK88_RS06755 IPR019533 Peptidase S26 RK88_RS06755 IPR019756 Peptidase S26A, signal peptidase I, serine active site RK88_RS06755 IPR036286 LexA/Signal peptidase-like superfamily RK88_RS06755 IPR019757 Peptidase S26A, signal peptidase I, lysine active site RK88_RS06755 IPR019758 Peptidase S26A, signal peptidase I, conserved site RK88_RS06755 IPR000223 Peptidase S26A, signal peptidase I RK88_RS06760 IPR000223 Peptidase S26A, signal peptidase I RK88_RS06760 IPR036286 LexA/Signal peptidase-like superfamily RK88_RS06760 IPR019533 Peptidase S26 RK88_RS06765 IPR015414 Transmembrane protein TMEM64 RK88_RS06765 IPR032816 SNARE associated Golgi protein RK88_RS06770 IPR035482 Phosphoglucose isomerase, SIS domain 2 RK88_RS06770 IPR001672 Phosphoglucose isomerase (PGI) RK88_RS06770 IPR018189 Phosphoglucose isomerase, conserved site RK88_RS06770 IPR035476 Phosphoglucose isomerase, SIS domain 1 RK88_RS06775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS06775 IPR023434 Argininosuccinate synthase, type 1 subfamily RK88_RS06775 IPR018223 Argininosuccinate synthase, conserved site RK88_RS06775 IPR001518 Argininosuccinate synthase RK88_RS06775 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body RK88_RS06780 IPR000362 Fumarate lyase family RK88_RS06780 IPR022761 Fumarate lyase, N-terminal RK88_RS06780 IPR008948 L-Aspartase-like RK88_RS06780 IPR020557 Fumarate lyase, conserved site RK88_RS06780 IPR024083 Fumarase/histidase, N-terminal RK88_RS06780 IPR009049 Argininosuccinate lyase RK88_RS06780 IPR029419 Argininosuccinate lyase, C-terminal RK88_RS06785 IPR030395 Glycerophosphodiester phosphodiesterase domain RK88_RS06785 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily RK88_RS06790 IPR014362 Glutamate dehydrogenase RK88_RS06790 IPR033524 Leu/Phe/Val dehydrogenases active site RK88_RS06790 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase RK88_RS06790 IPR036291 NAD(P)-binding domain superfamily RK88_RS06790 IPR033922 NAD(P) binding domain of glutamate dehydrogenase RK88_RS06790 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal RK88_RS06790 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain RK88_RS06795 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS06795 IPR034757 Ornithine aminotransferase, bacterial type RK88_RS06795 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS06795 IPR005814 Aminotransferase class-III RK88_RS06795 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS06795 IPR010164 Ornithine aminotransferase RK88_RS06800 IPR013785 Aldolase-type TIM barrel RK88_RS06800 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RK88_RS06805 IPR022967 RNA-binding domain, S1 RK88_RS06805 IPR003029 S1 domain RK88_RS06805 IPR012340 Nucleic acid-binding, OB-fold RK88_RS06810 IPR029000 Cyclophilin-like domain superfamily RK88_RS06810 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain RK88_RS06810 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase RK88_RS06820 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RK88_RS06820 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RK88_RS06820 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup RK88_RS06820 IPR005663 Monovalent cation proton antiporter subunit A RK88_RS06820 IPR025383 Domain of unknown function DUF4040 RK88_RS06825 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RK88_RS06825 IPR005281 Monovalent cation:proton antiporter, subunit B RK88_RS06830 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like RK88_RS06830 IPR006673 Mnh complex subunit C1 RK88_RS06835 IPR003918 NADH:ubiquinone oxidoreductase RK88_RS06835 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RK88_RS06835 IPR004775 Na(+)/H(+) antiporter subunit D1 RK88_RS06840 IPR004847 Na(+)/H(+) antiporter subunit E1 RK88_RS06840 IPR002758 Na+/H+ antiporter subunit E RK88_RS06845 IPR007208 Na(+)/H(+) antiporter subunit F-like RK88_RS06850 IPR005133 Na+/H+ antiporter subunit G RK88_RS06860 IPR006683 Thioesterase domain RK88_RS06860 IPR003736 Phenylacetic acid degradation-related domain RK88_RS06860 IPR029069 HotDog domain superfamily RK88_RS06865 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal RK88_RS06865 IPR032813 Putative Na+/H+ antiporter, N-terminal RK88_RS06870 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal RK88_RS06870 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B RK88_RS06870 IPR023042 Peptidase M17, leucine aminopeptidase RK88_RS06870 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal RK88_RS06875 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS06875 IPR023753 FAD/NAD(P)-binding domain RK88_RS06880 IPR035903 HesB-like domain superfamily RK88_RS06880 IPR016092 FeS cluster insertion protein RK88_RS06880 IPR000361 FeS cluster biogenesis RK88_RS06880 IPR017870 FeS cluster insertion, C-terminal, conserved site RK88_RS06885 IPR009910 Protein of unknown function DUF1450 RK88_RS06885 IPR022916 Protein of unknown function UPF0349 RK88_RS06890 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS06890 IPR023753 FAD/NAD(P)-binding domain RK88_RS06895 IPR009190 Protein of unknown function DUF1462 RK88_RS06895 IPR036249 Thioredoxin-like superfamily RK88_RS06895 IPR038218 YuzD-like superfamily RK88_RS06900 IPR034904 Fe-S cluster assembly domain superfamily RK88_RS06900 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal RK88_RS06905 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes RK88_RS06905 IPR006998 DltD RK88_RS06910 IPR036736 ACP-like superfamily RK88_RS06910 IPR003230 D-alanyl carrier protein RK88_RS06910 IPR009081 Phosphopantetheine binding ACP domain RK88_RS06915 IPR024024 D-alanyl transfer protein DltB RK88_RS06915 IPR004299 Membrane bound O-acyl transferase, MBOAT RK88_RS06915 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB RK88_RS06920 IPR010072 D-alanine--D-alanyl carrier protein ligase RK88_RS06920 IPR000873 AMP-dependent synthetase/ligase RK88_RS06920 IPR025110 AMP-binding enzyme, C-terminal domain RK88_RS06920 IPR010071 Amino acid adenylation domain RK88_RS06920 IPR042099 AMP-dependent synthetase-like superfamily RK88_RS06935 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK88_RS06935 IPR023756 Glyoxylate/hydroxypyruvate reductase B RK88_RS06935 IPR036291 NAD(P)-binding domain superfamily RK88_RS06935 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK88_RS06935 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RK88_RS06940 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 RK88_RS06940 IPR006357 HAD-superfamily hydrolase, subfamily IIA RK88_RS06940 IPR023214 HAD superfamily RK88_RS06940 IPR036412 HAD-like superfamily RK88_RS06945 IPR008201 Protein of unknown function DUF86 RK88_RS06945 IPR037038 Bsu32300-like superfamily RK88_RS06955 IPR038141 YutD-like superfamily RK88_RS06955 IPR009370 Protein of unknown function DUF1027 RK88_RS06960 IPR003698 Lipoyl synthase RK88_RS06960 IPR031691 Lipoyl synthase, N-terminal RK88_RS06960 IPR006638 Elp3/MiaB/NifB RK88_RS06960 IPR013785 Aldolase-type TIM barrel RK88_RS06960 IPR007197 Radical SAM RK88_RS06970 IPR002781 Transmembrane protein TauE-like RK88_RS06975 IPR002763 Protein of unknown function DUF72 RK88_RS06975 IPR036520 UPF0759 superfamily RK88_RS06980 IPR004136 Nitronate monooxygenase RK88_RS06980 IPR013785 Aldolase-type TIM barrel RK88_RS06985 IPR005170 Transporter-associated domain RK88_RS06985 IPR016169 FAD-binding, type PCMH, subdomain 2 RK88_RS06985 IPR036318 FAD-binding, type PCMH-like superfamily RK88_RS06985 IPR002550 CNNM, transmembrane domain RK88_RS06985 IPR000644 CBS domain RK88_RS07000 IPR037284 SUF system FeS cluster assembly, SufBD superfamily RK88_RS07000 IPR000825 SUF system FeS cluster assembly, SufBD RK88_RS07000 IPR010231 SUF system FeS cluster assembly, SufB RK88_RS07005 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal RK88_RS07010 IPR000192 Aminotransferase class V domain RK88_RS07010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS07010 IPR010970 Cysteine desulfurase, SufS RK88_RS07010 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS07010 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS07010 IPR016454 Cysteine desulfurase RK88_RS07015 IPR037284 SUF system FeS cluster assembly, SufBD superfamily RK88_RS07015 IPR011542 SUF system FeS cluster assembly, SufD RK88_RS07015 IPR000825 SUF system FeS cluster assembly, SufBD RK88_RS07020 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07020 IPR017871 ABC transporter, conserved site RK88_RS07020 IPR010230 FeS cluster assembly SUF system, ATPase SufC RK88_RS07020 IPR003439 ABC transporter-like RK88_RS07020 IPR003593 AAA+ ATPase domain RK88_RS07030 IPR008462 CsbD-like domain RK88_RS07030 IPR036629 YjbJ superfamily RK88_RS07035 IPR004872 Lipoprotein NlpA family RK88_RS07040 IPR035906 MetI-like superfamily RK88_RS07040 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS07045 IPR003439 ABC transporter-like RK88_RS07045 IPR018449 NIL domain RK88_RS07045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07045 IPR017871 ABC transporter, conserved site RK88_RS07045 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal RK88_RS07045 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain RK88_RS07045 IPR003593 AAA+ ATPase domain RK88_RS07055 IPR006171 TOPRIM domain RK88_RS07055 IPR034141 Ribonuclease M5-like, TOPRIM domain RK88_RS07060 IPR035948 YwqG-like superfamily RK88_RS07060 IPR015315 Protein of unknown function DUF1963 RK88_RS07070 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site RK88_RS07070 IPR011053 Single hybrid motif RK88_RS07070 IPR002930 Glycine cleavage system H-protein RK88_RS07070 IPR033753 Glycine cleavage system H-protein/Simiate RK88_RS07070 IPR017453 Glycine cleavage system H-protein, subgroup RK88_RS07070 IPR000089 Biotin/lipoyl attachment RK88_RS07075 IPR006504 Transcriptional regulator Spx/MgsR RK88_RS07075 IPR036249 Thioredoxin-like superfamily RK88_RS07075 IPR006660 Arsenate reductase-like RK88_RS07080 IPR036249 Thioredoxin-like superfamily RK88_RS07080 IPR013766 Thioredoxin domain RK88_RS07080 IPR005746 Thioredoxin RK88_RS07090 IPR001381 3-dehydroquinate dehydratase type I RK88_RS07090 IPR013785 Aldolase-type TIM barrel RK88_RS07095 IPR015946 K homology domain-like, alpha/beta RK88_RS07095 IPR019953 Organic hydroperoxide resistance protein famiy RK88_RS07095 IPR003718 OsmC/Ohr family RK88_RS07095 IPR036102 OsmC/Ohr superfamily RK88_RS07105 IPR001123 Amino acid exporter protein, LeuE-type RK88_RS07110 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RK88_RS07110 IPR023086 Phosphoglycerate mutase, GpmB, probable RK88_RS07110 IPR029033 Histidine phosphatase superfamily RK88_RS07110 IPR013078 Histidine phosphatase superfamily, clade-1 RK88_RS07150 IPR002059 Cold-shock protein, DNA-binding RK88_RS07150 IPR012340 Nucleic acid-binding, OB-fold RK88_RS07150 IPR019844 Cold-shock (CSD) domain RK88_RS07150 IPR011129 Cold shock domain RK88_RS07150 IPR012156 Cold shock, CspA RK88_RS07155 IPR002071 Thermonuclease active site RK88_RS07155 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RK88_RS07155 IPR035437 SNase-like, OB-fold superfamily RK88_RS07175 IPR008966 Adhesion domain superfamily RK88_RS07175 IPR005877 YSIRK Gram-positive signal peptide RK88_RS07175 IPR041171 SDR-like Ig domain RK88_RS07175 IPR011266 Fibrinogen-binding domain 2 RK88_RS07175 IPR019931 LPXTG cell wall anchor domain RK88_RS07175 IPR019948 Gram-positive LPXTG cell wall anchor RK88_RS07175 IPR011252 Fibrogen-binding domain 1 RK88_RS07210 IPR020081 SsrA-binding protein, conserved site RK88_RS07210 IPR023620 Small protein B RK88_RS07210 IPR000037 SsrA-binding protein RK88_RS07215 IPR004476 Ribonuclease II/ribonuclease R RK88_RS07215 IPR011805 Ribonuclease R RK88_RS07215 IPR022967 RNA-binding domain, S1 RK88_RS07215 IPR003029 S1 domain RK88_RS07215 IPR011129 Cold shock domain RK88_RS07215 IPR040476 RNase II/RNase R, cold shock domain RK88_RS07215 IPR001900 Ribonuclease II/R RK88_RS07215 IPR013223 Ribonuclease B, N-terminal OB domain RK88_RS07215 IPR012340 Nucleic acid-binding, OB-fold RK88_RS07215 IPR022966 Ribonuclease II/R, conserved site RK88_RS07220 IPR012354 Esterase/lipase RK88_RS07220 IPR029058 Alpha/Beta hydrolase fold RK88_RS07220 IPR022742 Serine aminopeptidase, S33 RK88_RS07225 IPR004692 Preprotein translocase SecG subunit RK88_RS07235 IPR000941 Enolase RK88_RS07235 IPR020809 Enolase, conserved site RK88_RS07235 IPR036849 Enolase-like, C-terminal domain superfamily RK88_RS07235 IPR029017 Enolase-like, N-terminal RK88_RS07235 IPR020811 Enolase, N-terminal RK88_RS07235 IPR020810 Enolase, C-terminal TIM barrel domain RK88_RS07240 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily RK88_RS07240 IPR011258 BPG-independent PGAM, N-terminal RK88_RS07240 IPR017850 Alkaline-phosphatase-like, core domain superfamily RK88_RS07240 IPR006124 Metalloenzyme RK88_RS07240 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent RK88_RS07245 IPR020861 Triosephosphate isomerase, active site RK88_RS07245 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic RK88_RS07245 IPR013785 Aldolase-type TIM barrel RK88_RS07245 IPR035990 Triosephosphate isomerase superfamily RK88_RS07245 IPR000652 Triosephosphate isomerase RK88_RS07250 IPR015824 Phosphoglycerate kinase, N-terminal RK88_RS07250 IPR001576 Phosphoglycerate kinase RK88_RS07250 IPR036043 Phosphoglycerate kinase superfamily RK88_RS07250 IPR015911 Phosphoglycerate kinase, conserved site RK88_RS07255 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family RK88_RS07255 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site RK88_RS07255 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain RK88_RS07255 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain RK88_RS07255 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I RK88_RS07255 IPR036291 NAD(P)-binding domain superfamily RK88_RS07260 IPR037171 NagB/RpiA transferase-like RK88_RS07260 IPR007324 Sugar-binding domain, putative RK88_RS07260 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS07260 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS07270 IPR013549 Domain of unknown function DUF1731 RK88_RS07270 IPR001509 NAD-dependent epimerase/dehydratase RK88_RS07270 IPR036291 NAD(P)-binding domain superfamily RK88_RS07270 IPR010099 Epimerase family protein SDR39U1 RK88_RS07275 IPR036291 NAD(P)-binding domain superfamily RK88_RS07275 IPR001891 Malic oxidoreductase RK88_RS07275 IPR012302 Malic enzyme, NAD-binding RK88_RS07275 IPR037062 Malic enzyme, N-terminal domain superfamily RK88_RS07275 IPR012301 Malic enzyme, N-terminal domain RK88_RS07275 IPR015884 Malic enzyme, conserved site RK88_RS07280 IPR033135 ClpP, histidine active site RK88_RS07280 IPR018215 ClpP, Ser active site RK88_RS07280 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RK88_RS07280 IPR029045 ClpP/crotonase-like domain superfamily RK88_RS07280 IPR001907 ATP-dependent Clp protease proteolytic subunit RK88_RS07290 IPR027434 Homing endonuclease RK88_RS07290 IPR039518 WhiA, LAGLIDADG-like domain RK88_RS07290 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS07290 IPR023054 Sporulation regulator WhiA, C-terminal RK88_RS07290 IPR003802 Sporulation regulator WhiA RK88_RS07290 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain RK88_RS07295 IPR038136 Gluconeogenesis factor superfamily RK88_RS07295 IPR010119 Gluconeogenesis factor RK88_RS07295 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 RK88_RS07300 IPR005337 RapZ-like family RK88_RS07300 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07310 IPR023753 FAD/NAD(P)-binding domain RK88_RS07310 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RK88_RS07310 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS07310 IPR005982 Thioredoxin reductase RK88_RS07320 IPR001451 Hexapeptide repeat RK88_RS07320 IPR011004 Trimeric LpxA-like superfamily RK88_RS07320 IPR018357 Hexapeptide transferase, conserved site RK88_RS07325 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt RK88_RS07330 IPR003755 HPr(Ser) kinase/phosphorylase RK88_RS07330 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily RK88_RS07330 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal RK88_RS07330 IPR011104 HPr kinase/phosphorylase, C-terminal RK88_RS07340 IPR004602 UvrABC system subunit A RK88_RS07340 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07340 IPR017871 ABC transporter, conserved site RK88_RS07340 IPR003439 ABC transporter-like RK88_RS07340 IPR041102 UvrA, interaction domain RK88_RS07340 IPR041552 UvrA DNA-binding domain RK88_RS07345 IPR024759 UvrB, YAD/RRR-motif-containing domain RK88_RS07345 IPR001650 Helicase, C-terminal RK88_RS07345 IPR041471 UvrB, interaction domain RK88_RS07345 IPR004807 UvrABC system, subunit B RK88_RS07345 IPR036876 UVR domain superfamily RK88_RS07345 IPR001943 UVR domain RK88_RS07345 IPR006935 Helicase/UvrB, N-terminal RK88_RS07345 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK88_RS07345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07360 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS07360 IPR036779 LysM domain superfamily RK88_RS07360 IPR018392 LysM domain RK88_RS07360 IPR007921 CHAP domain RK88_RS07375 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07375 IPR004027 SEC-C motif RK88_RS07375 IPR020937 SecA conserved site RK88_RS07375 IPR011115 SecA DEAD-like, N-terminal RK88_RS07375 IPR014018 SecA motor DEAD RK88_RS07375 IPR011130 SecA, preprotein cross-linking domain RK88_RS07375 IPR011116 SecA Wing/Scaffold RK88_RS07375 IPR036266 SecA, Wing/Scaffold superfamily RK88_RS07375 IPR036670 SecA, preprotein cross-linking domain superfamily RK88_RS07375 IPR000185 Protein translocase subunit SecA RK88_RS07380 IPR034694 Ribosome hibernation promoting factor, long/plastid RK88_RS07380 IPR036567 Ribosome hibernation promotion factor-like RK88_RS07380 IPR003489 Ribosome hibernation promoting factor/RaiA RK88_RS07380 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily RK88_RS07380 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal RK88_RS07385 IPR029057 Phosphoribosyltransferase-like RK88_RS07385 IPR005222 Competence protein ComF RK88_RS07385 IPR000836 Phosphoribosyltransferase domain RK88_RS07390 IPR006935 Helicase/UvrB, N-terminal RK88_RS07390 IPR001650 Helicase, C-terminal RK88_RS07390 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07390 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK88_RS07395 IPR003797 DegV RK88_RS07400 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RK88_RS07400 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal RK88_RS07400 IPR023582 Impact family RK88_RS07400 IPR015796 Impact family, bacterial/archaeal RK88_RS07400 IPR001498 Impact, N-terminal RK88_RS07400 IPR036956 Impact, N-terminal domain superfamily RK88_RS07400 IPR035647 EF-G domain III/V-like RK88_RS07400 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS07405 IPR000715 Glycosyl transferase, family 4 RK88_RS07405 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site RK88_RS07410 IPR000160 GGDEF domain RK88_RS07410 IPR029787 Nucleotide cyclase RK88_RS07410 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region RK88_RS07425 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site RK88_RS07425 IPR036264 Bacterial exopeptidase dimerisation domain RK88_RS07425 IPR002933 Peptidase M20 RK88_RS07425 IPR011650 Peptidase M20, dimerisation domain RK88_RS07425 IPR010161 Peptidase M20B, tripeptide aminopeptidase RK88_RS07430 IPR018193 Glycerate kinase, flavodoxin-like fold RK88_RS07430 IPR004381 Glycerate kinase RK88_RS07430 IPR018197 Glycerate kinase, restriction-enzyme-like fold RK88_RS07430 IPR036129 Glycerate kinase superfamily RK88_RS07450 IPR016166 FAD-binding domain, PCMH-type RK88_RS07450 IPR036318 FAD-binding, type PCMH-like superfamily RK88_RS07450 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily RK88_RS07450 IPR016167 FAD-binding, type PCMH, subdomain 1 RK88_RS07450 IPR006094 FAD linked oxidase, N-terminal RK88_RS07450 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal RK88_RS07450 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase RK88_RS07450 IPR016169 FAD-binding, type PCMH, subdomain 2 RK88_RS07460 IPR033870 FatB domain RK88_RS07460 IPR002491 ABC transporter periplasmic binding domain RK88_RS07465 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07465 IPR017871 ABC transporter, conserved site RK88_RS07465 IPR003439 ABC transporter-like RK88_RS07465 IPR003593 AAA+ ATPase domain RK88_RS07470 IPR037294 ABC transporter, BtuC-like RK88_RS07470 IPR000522 ABC transporter, permease protein, BtuC-like RK88_RS07475 IPR000522 ABC transporter, permease protein, BtuC-like RK88_RS07475 IPR037294 ABC transporter, BtuC-like RK88_RS07480 IPR033909 Ribonucleotide reductase small subunit RK88_RS07480 IPR000358 Ribonucleotide reductase small subunit family RK88_RS07480 IPR030475 Ribonucleotide reductase small subunit, acitve site RK88_RS07480 IPR026494 Ribonucleoside reductase subunit beta, NrdF RK88_RS07480 IPR012348 Ribonucleotide reductase-like RK88_RS07480 IPR009078 Ferritin-like superfamily RK88_RS07485 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal RK88_RS07485 IPR013554 Ribonucleotide reductase N-terminal RK88_RS07485 IPR039718 Ribonucleoside-diphosphate reductase large subunit RK88_RS07485 IPR013509 Ribonucleotide reductase large subunit, N-terminal RK88_RS07485 IPR000788 Ribonucleotide reductase large subunit, C-terminal RK88_RS07485 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE RK88_RS07485 IPR013346 Ribonucleotide reductase, class I , alpha subunit RK88_RS07490 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial RK88_RS07490 IPR029039 Flavoprotein-like superfamily RK88_RS07490 IPR004465 Ribonucleotide reductase Class Ib, NrdI RK88_RS07505 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 RK88_RS07505 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF RK88_RS07515 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site RK88_RS07515 IPR005279 Dipeptide/tripeptide permease RK88_RS07515 IPR020846 Major facilitator superfamily domain RK88_RS07515 IPR000109 Proton-dependent oligopeptide transporter family RK88_RS07515 IPR036259 MFS transporter superfamily RK88_RS07525 IPR005218 Diacylglycerol/lipid kinase RK88_RS07525 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily RK88_RS07525 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal RK88_RS07525 IPR001206 Diacylglycerol kinase, catalytic domain RK88_RS07530 IPR036412 HAD-like superfamily RK88_RS07530 IPR023214 HAD superfamily RK88_RS07530 IPR010708 5'(3')-deoxyribonucleotidase RK88_RS07535 IPR005861 Histidinol-phosphate aminotransferase family RK88_RS07535 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RK88_RS07535 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS07535 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS07535 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS07535 IPR004839 Aminotransferase, class I/classII RK88_RS07540 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS07540 IPR035906 MetI-like superfamily RK88_RS07545 IPR005892 Glycine betaine transport ATP-binding subunit RK88_RS07545 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07545 IPR003593 AAA+ ATPase domain RK88_RS07545 IPR003439 ABC transporter-like RK88_RS07545 IPR017871 ABC transporter, conserved site RK88_RS07545 IPR000644 CBS domain RK88_RS07550 IPR018982 RQC domain RK88_RS07550 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS07550 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RK88_RS07550 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07550 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS07550 IPR002121 HRDC domain RK88_RS07550 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial RK88_RS07550 IPR001650 Helicase, C-terminal RK88_RS07550 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK88_RS07550 IPR004589 DNA helicase, ATP-dependent, RecQ type RK88_RS07550 IPR011545 DEAD/DEAH box helicase domain RK88_RS07550 IPR010997 HRDC-like superfamily RK88_RS07555 IPR003593 AAA+ ATPase domain RK88_RS07555 IPR032524 ABC transporter Uup, C-terminal RK88_RS07555 IPR032781 ABC-transporter extension domain RK88_RS07555 IPR003439 ABC transporter-like RK88_RS07555 IPR017871 ABC transporter, conserved site RK88_RS07555 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily RK88_RS07555 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07560 IPR012160 Lipoteichoic acid synthase-like RK88_RS07560 IPR017850 Alkaline-phosphatase-like, core domain superfamily RK88_RS07560 IPR000917 Sulfatase, N-terminal RK88_RS07585 IPR015890 Chorismate-utilising enzyme, C-terminal RK88_RS07585 IPR006805 Anthranilate synthase component I, N-terminal RK88_RS07585 IPR005801 ADC synthase RK88_RS07585 IPR019999 Anthranilate synthase component I-like RK88_RS07590 IPR029062 Class I glutamine amidotransferase-like RK88_RS07590 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily RK88_RS07590 IPR000312 Glycosyl transferase, family 3 RK88_RS07590 IPR017459 Glycosyl transferase family 3, N-terminal domain RK88_RS07590 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily RK88_RS07590 IPR005940 Anthranilate phosphoribosyl transferase RK88_RS07590 IPR017926 Glutamine amidotransferase RK88_RS07590 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain RK88_RS07595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS07595 IPR018317 Queuosine biosynthesis protein QueC RK88_RS07600 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family RK88_RS07600 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily RK88_RS07605 IPR024924 7-carboxy-7-deazaguanine synthase-like RK88_RS07605 IPR017742 7-carboxy-7-deazaguanine synthase RK88_RS07605 IPR013785 Aldolase-type TIM barrel RK88_RS07605 IPR007197 Radical SAM RK88_RS07625 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS07625 IPR039420 Transcriptional regulatory protein WalR-like RK88_RS07625 IPR001867 OmpR/PhoB-type DNA-binding domain RK88_RS07625 IPR011006 CheY-like superfamily RK88_RS07625 IPR001789 Signal transduction response regulator, receiver domain RK88_RS07630 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RK88_RS07630 IPR003660 HAMP domain RK88_RS07630 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS07630 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS07630 IPR005467 Histidine kinase domain RK88_RS07630 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RK88_RS07630 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RK88_RS07635 IPR029044 Nucleotide-diphospho-sugar transferases RK88_RS07635 IPR001173 Glycosyltransferase 2-like RK88_RS07640 IPR023210 NADP-dependent oxidoreductase domain RK88_RS07640 IPR036812 NADP-dependent oxidoreductase domain superfamily RK88_RS07640 IPR020471 Aldo/keto reductase RK88_RS07640 IPR018170 Aldo/keto reductase, conserved site RK88_RS07645 IPR036318 FAD-binding, type PCMH-like superfamily RK88_RS07645 IPR002550 CNNM, transmembrane domain RK88_RS07645 IPR000644 CBS domain RK88_RS07645 IPR016169 FAD-binding, type PCMH, subdomain 2 RK88_RS07645 IPR005170 Transporter-associated domain RK88_RS07650 IPR003764 N-acetylglucosamine-6-phosphate deacetylase RK88_RS07650 IPR006680 Amidohydrolase-related RK88_RS07650 IPR011059 Metal-dependent hydrolase, composite domain superfamily RK88_RS07650 IPR032466 Metal-dependent hydrolase RK88_RS07655 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RK88_RS07655 IPR016152 Phosphotransferase/anion transporter RK88_RS07655 IPR002178 PTS EIIA type-2 domain RK88_RS07655 IPR036095 PTS system IIB component-like superfamily RK88_RS07655 IPR013011 Phosphotransferase system, EIIB component, type 2 RK88_RS07655 IPR013014 Phosphotransferase system, EIIC component, type 2 RK88_RS07655 IPR004715 Phosphotransferase system, IIA component fructose subfamily RK88_RS07655 IPR003353 Phosphotransferase system, fructose-specific IIB subunit RK88_RS07655 IPR006327 Phosphotransferase system, fructose IIC component RK88_RS07660 IPR011611 Carbohydrate kinase PfkB RK88_RS07660 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RK88_RS07660 IPR022463 Fructose 1-phosphate kinase RK88_RS07660 IPR017583 Tagatose/fructose phosphokinase RK88_RS07660 IPR029056 Ribokinase-like RK88_RS07665 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS07665 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RK88_RS07665 IPR037171 NagB/RpiA transferase-like RK88_RS07665 IPR014036 DeoR C-terminal sensor domain RK88_RS07665 IPR001034 DeoR-type HTH domain RK88_RS07670 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain RK88_RS07670 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily RK88_RS07670 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RK88_RS07680 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RK88_RS07680 IPR004734 Multidrug resistance protein RK88_RS07680 IPR011701 Major facilitator superfamily RK88_RS07680 IPR020846 Major facilitator superfamily domain RK88_RS07680 IPR036259 MFS transporter superfamily RK88_RS07705 IPR001898 Solute carrier family 13 RK88_RS07705 IPR030676 Citrate carrier CitT-related RK88_RS07715 IPR036812 NADP-dependent oxidoreductase domain superfamily RK88_RS07715 IPR020471 Aldo/keto reductase RK88_RS07715 IPR023210 NADP-dependent oxidoreductase domain RK88_RS07720 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK88_RS07720 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07720 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RK88_RS07725 IPR000835 MarR-type HTH domain RK88_RS07725 IPR023187 Transcriptional regulator MarR-type, conserved site RK88_RS07725 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS07725 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS07730 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07730 IPR017871 ABC transporter, conserved site RK88_RS07730 IPR003439 ABC transporter-like RK88_RS07730 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC RK88_RS07730 IPR036640 ABC transporter type 1, transmembrane domain superfamily RK88_RS07730 IPR003593 AAA+ ATPase domain RK88_RS07730 IPR011527 ABC transporter type 1, transmembrane domain RK88_RS07735 IPR017871 ABC transporter, conserved site RK88_RS07735 IPR003439 ABC transporter-like RK88_RS07735 IPR036640 ABC transporter type 1, transmembrane domain superfamily RK88_RS07735 IPR011527 ABC transporter type 1, transmembrane domain RK88_RS07735 IPR003593 AAA+ ATPase domain RK88_RS07735 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD RK88_RS07735 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07735 IPR039421 Type I protein exporter RK88_RS07740 IPR003824 Undecaprenyl-diphosphatase UppP RK88_RS07750 IPR003791 Protein of unknown function UPF0178 RK88_RS07755 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RK88_RS07755 IPR031100 LOG family RK88_RS07760 IPR000182 GNAT domain RK88_RS07760 IPR016181 Acyl-CoA N-acyltransferase RK88_RS07790 IPR032874 DDE domain RK88_RS07790 IPR036397 Ribonuclease H superfamily RK88_RS07790 IPR012337 Ribonuclease H-like superfamily RK88_RS07790 IPR001584 Integrase, catalytic core RK88_RS07800 IPR018334 ArsR-type transcription regulator, HTH motif RK88_RS07800 IPR011991 ArsR-like helix-turn-helix domain RK88_RS07800 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS07800 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS07800 IPR001845 HTH ArsR-type DNA-binding domain RK88_RS07805 IPR006121 Heavy metal-associated domain, HMA RK88_RS07805 IPR017969 Heavy-metal-associated, conserved site RK88_RS07805 IPR023299 P-type ATPase, cytoplasmic domain N RK88_RS07805 IPR018303 P-type ATPase, phosphorylation site RK88_RS07805 IPR023298 P-type ATPase, transmembrane domain superfamily RK88_RS07805 IPR023214 HAD superfamily RK88_RS07805 IPR036412 HAD-like superfamily RK88_RS07805 IPR008250 P-type ATPase, A domain superfamily RK88_RS07805 IPR036163 Heavy metal-associated domain superfamily RK88_RS07805 IPR027256 P-type ATPase, subfamily IB RK88_RS07805 IPR001757 P-type ATPase RK88_RS07815 IPR011707 Multicopper oxidase, type 3 RK88_RS07815 IPR011706 Multicopper oxidase, type 2 RK88_RS07815 IPR002355 Multicopper oxidase, copper-binding site RK88_RS07815 IPR033138 Multicopper oxidases, conserved site RK88_RS07815 IPR008972 Cupredoxin RK88_RS07820 IPR036412 HAD-like superfamily RK88_RS07820 IPR027256 P-type ATPase, subfamily IB RK88_RS07820 IPR001757 P-type ATPase RK88_RS07820 IPR023299 P-type ATPase, cytoplasmic domain N RK88_RS07820 IPR018303 P-type ATPase, phosphorylation site RK88_RS07820 IPR023298 P-type ATPase, transmembrane domain superfamily RK88_RS07820 IPR008250 P-type ATPase, A domain superfamily RK88_RS07820 IPR023214 HAD superfamily RK88_RS07825 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily RK88_RS07825 IPR006120 Resolvase, HTH domain RK88_RS07825 IPR006119 Resolvase, N-terminal catalytic domain RK88_RS07825 IPR009057 Homeobox-like domain superfamily RK88_RS07825 IPR006118 Recombinase, conserved site RK88_RS07830 IPR018383 Uncharacterised protein family UPF0324, prokaryote RK88_RS07835 IPR005119 LysR, substrate-binding RK88_RS07835 IPR000847 Transcription regulator HTH, LysR RK88_RS07835 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS07835 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS07875 IPR001668 Plasmid recombination enzyme RK88_RS07880 IPR001668 Plasmid recombination enzyme RK88_RS07885 IPR001668 Plasmid recombination enzyme RK88_RS07895 IPR003593 AAA+ ATPase domain RK88_RS07895 IPR003838 ABC transporter permease protein domain RK88_RS07895 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS07895 IPR003439 ABC transporter-like RK88_RS07895 IPR017871 ABC transporter, conserved site RK88_RS07895 IPR017911 ABC transporter, macrolide export, ATP-binding domain RK88_RS07895 IPR025857 MacB-like periplasmic core domain RK88_RS07915 IPR036196 Phosphotyrosine protein phosphatase I superfamily RK88_RS07915 IPR023485 Phosphotyrosine protein phosphatase I RK88_RS07915 IPR014064 Arsenate reductase ArsC RK88_RS07920 IPR000802 Arsenical pump membrane protein, ArsB RK88_RS07925 IPR018334 ArsR-type transcription regulator, HTH motif RK88_RS07925 IPR001845 HTH ArsR-type DNA-binding domain RK88_RS07925 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS07925 IPR011991 ArsR-like helix-turn-helix domain RK88_RS07925 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS07930 IPR006118 Recombinase, conserved site RK88_RS07930 IPR006120 Resolvase, HTH domain RK88_RS07930 IPR006119 Resolvase, N-terminal catalytic domain RK88_RS07930 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily RK88_RS07940 IPR032874 DDE domain RK88_RS07940 IPR012337 Ribonuclease H-like superfamily RK88_RS07940 IPR036397 Ribonuclease H superfamily RK88_RS07940 IPR001584 Integrase, catalytic core RK88_RS07950 IPR007403 Protein of unknown function DUF456 RK88_RS07955 IPR004750 Sugar efflux RK88_RS07955 IPR036259 MFS transporter superfamily RK88_RS07955 IPR011701 Major facilitator superfamily RK88_RS07955 IPR020846 Major facilitator superfamily domain RK88_RS07960 IPR005119 LysR, substrate-binding RK88_RS07960 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS07960 IPR000847 Transcription regulator HTH, LysR RK88_RS07960 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS07980 IPR029072 YebC-like RK88_RS07980 IPR026562 Probable transcriptional regulatory protein YeeN RK88_RS07980 IPR002876 Transcriptional regulator TACO1-like RK88_RS07980 IPR017856 Integrase-like, N-terminal RK88_RS07980 IPR026564 Transcriptional regulator TACO1-like, domain 3 RK88_RS07985 IPR010166 Transcriptional regulator SarA/Rot RK88_RS07985 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS07985 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS08005 IPR007921 CHAP domain RK88_RS08005 IPR018392 LysM domain RK88_RS08005 IPR036779 LysM domain superfamily RK88_RS08005 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS08010 IPR001204 Phosphate transporter RK88_RS08015 IPR038078 PhoU-like domain superfamily RK88_RS08015 IPR018445 Putative phosphate transport regulator RK88_RS08020 IPR027022 ABC transporter permease protein, BceB-type RK88_RS08020 IPR003838 ABC transporter permease protein domain RK88_RS08025 IPR003593 AAA+ ATPase domain RK88_RS08025 IPR003439 ABC transporter-like RK88_RS08025 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08030 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RK88_RS08030 IPR005467 Histidine kinase domain RK88_RS08030 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS08030 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS08030 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RK88_RS08035 IPR016032 Signal transduction response regulator, C-terminal effector RK88_RS08035 IPR001867 OmpR/PhoB-type DNA-binding domain RK88_RS08035 IPR011006 CheY-like superfamily RK88_RS08035 IPR001789 Signal transduction response regulator, receiver domain RK88_RS08035 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS08035 IPR039420 Transcriptional regulatory protein WalR-like RK88_RS08040 IPR036291 NAD(P)-binding domain superfamily RK88_RS08040 IPR001509 NAD-dependent epimerase/dehydratase RK88_RS08065 IPR038728 Uncharacterized membrane protein YkvI RK88_RS08080 IPR012737 Dihydroxyacetone kinase, subunit L RK88_RS08080 IPR004007 DhaL domain RK88_RS08080 IPR036117 DhaL domain superfamily RK88_RS08085 IPR004006 DhaK domain RK88_RS08085 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 RK88_RS08090 IPR037294 ABC transporter, BtuC-like RK88_RS08090 IPR000522 ABC transporter, permease protein, BtuC-like RK88_RS08095 IPR037294 ABC transporter, BtuC-like RK88_RS08095 IPR000522 ABC transporter, permease protein, BtuC-like RK88_RS08100 IPR003439 ABC transporter-like RK88_RS08100 IPR017871 ABC transporter, conserved site RK88_RS08100 IPR003593 AAA+ ATPase domain RK88_RS08100 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08105 IPR019264 Domain of unknown function DUF2179 RK88_RS08105 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RK88_RS08105 IPR003740 Uncharacterised membrane protein YitT RK88_RS08115 IPR002668 Concentrative nucleoside transporter N-terminal domain RK88_RS08115 IPR008276 Concentrative nucleoside transporter RK88_RS08115 IPR011657 Concentrative nucleoside transporter C-terminal domain RK88_RS08115 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial RK88_RS08120 IPR017871 ABC transporter, conserved site RK88_RS08120 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08120 IPR039421 Type I protein exporter RK88_RS08120 IPR011527 ABC transporter type 1, transmembrane domain RK88_RS08120 IPR003593 AAA+ ATPase domain RK88_RS08120 IPR036640 ABC transporter type 1, transmembrane domain superfamily RK88_RS08120 IPR003439 ABC transporter-like RK88_RS08125 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A RK88_RS08125 IPR012338 Beta-lactamase/transpeptidase-like RK88_RS08125 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily RK88_RS08125 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal RK88_RS08125 IPR015956 Penicillin-binding protein, C-terminal domain superfamily RK88_RS08125 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal RK88_RS08130 IPR004821 Cytidyltransferase-like domain RK88_RS08130 IPR006409 Glycerol-3-phosphate cytidylyltransferase RK88_RS08130 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS08135 IPR029044 Nucleotide-diphospho-sugar transferases RK88_RS08135 IPR001173 Glycosyltransferase 2-like RK88_RS08140 IPR007554 CDP-glycerol glycerophosphotransferase RK88_RS08145 IPR013525 ABC-2 type transporter RK88_RS08145 IPR000412 ABC-2 transporter RK88_RS08150 IPR003439 ABC transporter-like RK88_RS08150 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08150 IPR003593 AAA+ ATPase domain RK88_RS08150 IPR017871 ABC transporter, conserved site RK88_RS08150 IPR015860 ABC transporter, teichoic acids export, TagH RK88_RS08155 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase RK88_RS08155 IPR004629 Glycosyl transferase WecB/TagA/CpsF RK88_RS08165 IPR022689 Iron dependent repressor RK88_RS08165 IPR022687 DTXR-type HTH domain RK88_RS08165 IPR038157 Ferrous iron transporter, core domain RK88_RS08165 IPR008988 Transcriptional repressor, C-terminal RK88_RS08165 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily RK88_RS08165 IPR001367 Iron dependent repressor, metal binding and dimerisation domain RK88_RS08165 IPR007167 Ferrous iron transporter FeoA domain RK88_RS08165 IPR040767 Diphteria toxin repressor, SH3 domain RK88_RS08165 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS08165 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS08170 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08170 IPR017871 ABC transporter, conserved site RK88_RS08170 IPR003439 ABC transporter-like RK88_RS08170 IPR003593 AAA+ ATPase domain RK88_RS08175 IPR037294 ABC transporter, BtuC-like RK88_RS08175 IPR001626 ABC transporter, TroCD-like RK88_RS08180 IPR006128 Adhesion lipoprotein RK88_RS08180 IPR006129 Adhesin B RK88_RS08180 IPR006127 Periplasmic solute binding protein, ZnuA-like RK88_RS08190 IPR036259 MFS transporter superfamily RK88_RS08190 IPR020846 Major facilitator superfamily domain RK88_RS08190 IPR011701 Major facilitator superfamily RK88_RS08195 IPR002014 VHS domain RK88_RS08195 IPR006153 Cation/H+ exchanger RK88_RS08195 IPR018422 Cation/H+ exchanger, CPA1 family RK88_RS08195 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria RK88_RS08200 IPR005133 Na+/H+ antiporter subunit G RK88_RS08205 IPR007208 Na(+)/H(+) antiporter subunit F-like RK88_RS08210 IPR002758 Na+/H+ antiporter subunit E RK88_RS08215 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RK88_RS08215 IPR003918 NADH:ubiquinone oxidoreductase RK88_RS08220 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like RK88_RS08225 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RK88_RS08230 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RK88_RS08230 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RK88_RS08230 IPR025383 Domain of unknown function DUF4040 RK88_RS08235 IPR002104 Integrase, catalytic domain RK88_RS08235 IPR011010 DNA breaking-rejoining enzyme, catalytic core RK88_RS08235 IPR004107 Integrase, SAM-like, N-terminal RK88_RS08235 IPR011932 Tyrosine recombinase XerD RK88_RS08235 IPR023009 Tyrosine recombinase XerC/XerD RK88_RS08235 IPR010998 Integrase/recombinase, N-terminal RK88_RS08235 IPR013762 Integrase-like, catalytic domain superfamily RK88_RS08255 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS08255 IPR010166 Transcriptional regulator SarA/Rot RK88_RS08255 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS08260 IPR029058 Alpha/Beta hydrolase fold RK88_RS08260 IPR000073 Alpha/beta hydrolase fold-1 RK88_RS08260 IPR000639 Epoxide hydrolase-like RK88_RS08275 IPR029058 Alpha/Beta hydrolase fold RK88_RS08275 IPR000073 Alpha/beta hydrolase fold-1 RK88_RS08275 IPR019913 Pyrimidine utilisation protein RutD RK88_RS08280 IPR041492 Haloacid dehalogenase-like hydrolase RK88_RS08280 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RK88_RS08280 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic RK88_RS08280 IPR037512 Phosphoglycolate phosphatase, prokaryotic RK88_RS08280 IPR023214 HAD superfamily RK88_RS08280 IPR006439 HAD hydrolase, subfamily IA RK88_RS08280 IPR036412 HAD-like superfamily RK88_RS08285 IPR037294 ABC transporter, BtuC-like RK88_RS08285 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC RK88_RS08285 IPR000522 ABC transporter, permease protein, BtuC-like RK88_RS08290 IPR002491 ABC transporter periplasmic binding domain RK88_RS08300 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RK88_RS08300 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS08300 IPR008909 DALR anticodon binding RK88_RS08300 IPR035684 Arginyl-tRNA synthetase, catalytic core domain RK88_RS08300 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily RK88_RS08300 IPR001278 Arginine-tRNA ligase RK88_RS08300 IPR005148 Arginyl tRNA synthetase N-terminal domain RK88_RS08300 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RK88_RS08315 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RK88_RS08315 IPR011032 GroES-like superfamily RK88_RS08315 IPR013149 Alcohol dehydrogenase, C-terminal RK88_RS08315 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RK88_RS08315 IPR020843 Polyketide synthase, enoylreductase domain RK88_RS08315 IPR036291 NAD(P)-binding domain superfamily RK88_RS08315 IPR013154 Alcohol dehydrogenase, N-terminal RK88_RS08320 IPR014852 Uncharacterised protein YwhD RK88_RS08325 IPR003607 HD/PDEase domain RK88_RS08325 IPR006674 HD domain RK88_RS08335 IPR029039 Flavoprotein-like superfamily RK88_RS08335 IPR005025 NADPH-dependent FMN reductase-like RK88_RS08340 IPR020471 Aldo/keto reductase RK88_RS08340 IPR023210 NADP-dependent oxidoreductase domain RK88_RS08340 IPR036812 NADP-dependent oxidoreductase domain superfamily RK88_RS08340 IPR018170 Aldo/keto reductase, conserved site RK88_RS08380 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS08380 IPR023753 FAD/NAD(P)-binding domain RK88_RS08380 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I RK88_RS08380 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RK88_RS08380 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site RK88_RS08380 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RK88_RS08385 IPR009910 Protein of unknown function DUF1450 RK88_RS08385 IPR020880 Protein of unknown function UPF0741 RK88_RS08390 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS08390 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS08390 IPR005917 Phosphomevalonate kinase, bacteria RK88_RS08390 IPR036554 GHMP kinase, C-terminal domain superfamily RK88_RS08390 IPR006204 GHMP kinase N-terminal domain RK88_RS08390 IPR035102 Phosphomevalonate kinase RK88_RS08390 IPR013750 GHMP kinase, C-terminal domain RK88_RS08400 IPR000870 Homoserine kinase RK88_RS08400 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS08400 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS08400 IPR013750 GHMP kinase, C-terminal domain RK88_RS08400 IPR036554 GHMP kinase, C-terminal domain superfamily RK88_RS08400 IPR006204 GHMP kinase N-terminal domain RK88_RS08400 IPR006203 GHMP kinase, ATP-binding, conserved site RK88_RS08405 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RK88_RS08405 IPR024897 Octanoyltransferase LipL RK88_RS08410 IPR042113 Phosphate acetyltransferase, domain 1 RK88_RS08410 IPR012147 Phosphate acetyl/butyryltransferase RK88_RS08410 IPR004614 Phosphate acetyltransferase RK88_RS08410 IPR002505 Phosphate acetyl/butaryl transferase RK88_RS08410 IPR042112 Phosphate acetyltransferase, domain 2 RK88_RS08440 IPR006696 Protein of unknown function DUF423 RK88_RS08450 IPR002043 Uracil-DNA glycosylase family 1 RK88_RS08450 IPR005122 Uracil-DNA glycosylase-like RK88_RS08450 IPR036895 Uracil-DNA glycosylase-like domain superfamily RK88_RS08450 IPR018085 Uracil-DNA glycosylase, active site RK88_RS08455 IPR029056 Ribokinase-like RK88_RS08455 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase RK88_RS08455 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase RK88_RS08460 IPR035374 Protein VraX RK88_RS08470 IPR016994 Uncharacterised conserved protein UCP032370, VraC RK88_RS08475 IPR002155 Thiolase RK88_RS08475 IPR016039 Thiolase-like RK88_RS08475 IPR020617 Thiolase, C-terminal RK88_RS08475 IPR020613 Thiolase, conserved site RK88_RS08475 IPR020616 Thiolase, N-terminal RK88_RS08480 IPR042099 AMP-dependent synthetase-like superfamily RK88_RS08480 IPR000873 AMP-dependent synthetase/ligase RK88_RS08480 IPR020845 AMP-binding, conserved site RK88_RS08480 IPR025110 AMP-binding enzyme, C-terminal domain RK88_RS08490 IPR020846 Major facilitator superfamily domain RK88_RS08490 IPR011701 Major facilitator superfamily RK88_RS08490 IPR036259 MFS transporter superfamily RK88_RS08490 IPR005829 Sugar transporter, conserved site RK88_RS08500 IPR001347 Sugar isomerase (SIS) RK88_RS08500 IPR017552 3-hexulose-6-phosphate isomerase RK88_RS08505 IPR011060 Ribulose-phosphate binding barrel RK88_RS08505 IPR017553 3-hexulose-6-phosphate synthase RK88_RS08505 IPR013785 Aldolase-type TIM barrel RK88_RS08505 IPR041710 HPS/KGPDC domain RK88_RS08505 IPR001754 Orotidine 5'-phosphate decarboxylase domain RK88_RS08510 IPR037171 NagB/RpiA transferase-like RK88_RS08510 IPR018321 Glucosamine-6-phosphate isomerase, conserved site RK88_RS08510 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase RK88_RS08510 IPR004547 Glucosamine-6-phosphate isomerase RK88_RS08520 IPR024078 Putative deacetylase LmbE-like domain superfamily RK88_RS08520 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related RK88_RS08520 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 RK88_RS08525 IPR022838 GTP cyclohydrolase FolE2 RK88_RS08525 IPR003801 GTP cyclohydrolase FolE2/MptA RK88_RS08535 IPR001296 Glycosyl transferase, family 1 RK88_RS08540 IPR041171 SDR-like Ig domain RK88_RS08540 IPR033764 SD-repeat containing protein, B domain RK88_RS08540 IPR005877 YSIRK Gram-positive signal peptide RK88_RS08540 IPR019931 LPXTG cell wall anchor domain RK88_RS08540 IPR011266 Fibrinogen-binding domain 2 RK88_RS08540 IPR019948 Gram-positive LPXTG cell wall anchor RK88_RS08540 IPR011252 Fibrogen-binding domain 1 RK88_RS08540 IPR008966 Adhesion domain superfamily RK88_RS08540 IPR013783 Immunoglobulin-like fold RK88_RS08545 IPR011266 Fibrinogen-binding domain 2 RK88_RS08545 IPR008966 Adhesion domain superfamily RK88_RS08545 IPR011252 Fibrogen-binding domain 1 RK88_RS08545 IPR041171 SDR-like Ig domain RK88_RS08545 IPR005877 YSIRK Gram-positive signal peptide RK88_RS08545 IPR019948 Gram-positive LPXTG cell wall anchor RK88_RS08545 IPR033764 SD-repeat containing protein, B domain RK88_RS08545 IPR019931 LPXTG cell wall anchor domain RK88_RS08545 IPR013783 Immunoglobulin-like fold RK88_RS08550 IPR011266 Fibrinogen-binding domain 2 RK88_RS08550 IPR033764 SD-repeat containing protein, B domain RK88_RS08550 IPR011252 Fibrogen-binding domain 1 RK88_RS08550 IPR008966 Adhesion domain superfamily RK88_RS08550 IPR005877 YSIRK Gram-positive signal peptide RK88_RS08550 IPR019948 Gram-positive LPXTG cell wall anchor RK88_RS08550 IPR041171 SDR-like Ig domain RK88_RS08550 IPR019931 LPXTG cell wall anchor domain RK88_RS08550 IPR013783 Immunoglobulin-like fold RK88_RS08560 IPR005025 NADPH-dependent FMN reductase-like RK88_RS08560 IPR029039 Flavoprotein-like superfamily RK88_RS08565 IPR006379 HAD-superfamily hydrolase, subfamily IIB RK88_RS08565 IPR036412 HAD-like superfamily RK88_RS08565 IPR000150 Cof family RK88_RS08565 IPR023214 HAD superfamily RK88_RS08570 IPR002125 Cytidine and deoxycytidylate deaminase domain RK88_RS08570 IPR016192 APOBEC/CMP deaminase, zinc-binding RK88_RS08570 IPR028883 tRNA-specific adenosine deaminase RK88_RS08570 IPR016193 Cytidine deaminase-like RK88_RS08575 IPR002624 Deoxynucleoside kinase RK88_RS08575 IPR031314 Deoxynucleoside kinase domain RK88_RS08575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08580 IPR002624 Deoxynucleoside kinase RK88_RS08580 IPR031314 Deoxynucleoside kinase domain RK88_RS08580 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08585 IPR006543 Histidinol-phosphate phosphatase RK88_RS08585 IPR036412 HAD-like superfamily RK88_RS08585 IPR023214 HAD superfamily RK88_RS08585 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase RK88_RS08585 IPR006549 HAD-superfamily hydrolase,subfamily IIIA RK88_RS08590 IPR036038 Aminotransferase-like, PLP-dependent enzymes RK88_RS08590 IPR005786 Branched-chain amino acid aminotransferase II RK88_RS08590 IPR033939 Branched-chain aminotransferase RK88_RS08590 IPR018300 Aminotransferase, class IV, conserved site RK88_RS08590 IPR001544 Aminotransferase class IV RK88_RS08595 IPR001598 Transposase, IS30, conserved site RK88_RS08595 IPR001584 Integrase, catalytic core RK88_RS08595 IPR012337 Ribonuclease H-like superfamily RK88_RS08595 IPR025246 Transposase IS30-like HTH domain RK88_RS08595 IPR036397 Ribonuclease H superfamily RK88_RS08600 IPR001509 NAD-dependent epimerase/dehydratase RK88_RS08600 IPR036291 NAD(P)-binding domain superfamily RK88_RS08605 IPR000577 Carbohydrate kinase, FGGY RK88_RS08605 IPR018485 Carbohydrate kinase, FGGY, C-terminal RK88_RS08605 IPR018484 Carbohydrate kinase, FGGY, N-terminal RK88_RS08605 IPR005929 Ribulokinase RK88_RS08610 IPR002818 DJ-1/PfpI RK88_RS08610 IPR017283 Protein/nucleic acid deglycase HchA RK88_RS08610 IPR029062 Class I glutamine amidotransferase-like RK88_RS08615 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS08615 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS08615 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS08615 IPR004839 Aminotransferase, class I/classII RK88_RS08615 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type RK88_RS08615 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RK88_RS08620 IPR002933 Peptidase M20 RK88_RS08620 IPR017439 Amidohydrolase RK88_RS08620 IPR011650 Peptidase M20, dimerisation domain RK88_RS08620 IPR036264 Bacterial exopeptidase dimerisation domain RK88_RS08625 IPR009000 Translation protein, beta-barrel domain superfamily RK88_RS08625 IPR000795 Transcription factor, GTP-binding domain RK88_RS08625 IPR005225 Small GTP-binding protein domain RK88_RS08625 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08625 IPR033720 Elongation factor Tu, domain 2 RK88_RS08625 IPR004161 Translation elongation factor EFTu-like, domain 2 RK88_RS08625 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain RK88_RS08625 IPR031157 Tr-type G domain, conserved site RK88_RS08625 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RK88_RS08625 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RK88_RS08625 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle RK88_RS08630 IPR004161 Translation elongation factor EFTu-like, domain 2 RK88_RS08630 IPR005517 Translation elongation factor EFG/EF2, domain IV RK88_RS08630 IPR004540 Translation elongation factor EFG/EF2 RK88_RS08630 IPR009000 Translation protein, beta-barrel domain superfamily RK88_RS08630 IPR000795 Transcription factor, GTP-binding domain RK88_RS08630 IPR000640 Elongation factor EFG, domain V-like RK88_RS08630 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08630 IPR031157 Tr-type G domain, conserved site RK88_RS08630 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS08630 IPR005225 Small GTP-binding protein domain RK88_RS08630 IPR041095 Elongation Factor G, domain II RK88_RS08630 IPR009022 Elongation factor G, domain III RK88_RS08630 IPR035647 EF-G domain III/V-like RK88_RS08630 IPR035649 EFG, domain V RK88_RS08630 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS08635 IPR000235 Ribosomal protein S5/S7 RK88_RS08635 IPR020606 Ribosomal protein S7, conserved site RK88_RS08635 IPR023798 Ribosomal protein S7 domain RK88_RS08635 IPR036823 Ribosomal protein S7 domain superfamily RK88_RS08635 IPR005717 Ribosomal protein S7, bacterial/organellar-type RK88_RS08640 IPR005679 Ribosomal protein S12, bacterial-type RK88_RS08640 IPR006032 Ribosomal protein S12/S23 RK88_RS08640 IPR012340 Nucleic acid-binding, OB-fold RK88_RS08645 IPR029064 50S ribosomal protein L30e-like RK88_RS08645 IPR023460 Ribosomal protein L7Ae, putative RK88_RS08645 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 RK88_RS08650 IPR042102 RNA polymerase Rpb1, domain 3 superfamily RK88_RS08650 IPR007066 RNA polymerase Rpb1, domain 3 RK88_RS08650 IPR006592 RNA polymerase, N-terminal RK88_RS08650 IPR000722 RNA polymerase, alpha subunit RK88_RS08650 IPR012754 DNA-directed RNA polymerase, subunit beta-prime RK88_RS08650 IPR007081 RNA polymerase Rpb1, domain 5 RK88_RS08650 IPR038120 RNA polymerase Rpb1, funnel domain superfamily RK88_RS08650 IPR007083 RNA polymerase Rpb1, domain 4 RK88_RS08650 IPR007080 RNA polymerase Rpb1, domain 1 RK88_RS08655 IPR007121 RNA polymerase, beta subunit, conserved site RK88_RS08655 IPR015712 DNA-directed RNA polymerase, subunit 2 RK88_RS08655 IPR014724 RNA polymerase Rpb2, OB-fold RK88_RS08655 IPR007641 RNA polymerase Rpb2, domain 7 RK88_RS08655 IPR007645 RNA polymerase Rpb2, domain 3 RK88_RS08655 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type RK88_RS08655 IPR007642 RNA polymerase Rpb2, domain 2 RK88_RS08655 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain RK88_RS08655 IPR037034 RNA polymerase Rpb2, domain 2 superfamily RK88_RS08655 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily RK88_RS08655 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain RK88_RS08655 IPR007644 RNA polymerase, beta subunit, protrusion RK88_RS08660 IPR007848 Methyltransferase small domain RK88_RS08660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS08665 IPR013823 Ribosomal protein L7/L12, C-terminal RK88_RS08665 IPR000206 Ribosomal protein L7/L12 RK88_RS08665 IPR008932 Ribosomal protein L7/L12, oligomerisation RK88_RS08665 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily RK88_RS08665 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RK88_RS08670 IPR001790 Ribosomal protein L10P RK88_RS08670 IPR002363 Ribosomal protein L10, eubacterial, conserved site RK88_RS08670 IPR022973 Ribosomal protein L10 RK88_RS08680 IPR023674 Ribosomal protein L1-like RK88_RS08680 IPR005878 Ribosomal protein L1, bacterial-type RK88_RS08680 IPR002143 Ribosomal protein L1 RK88_RS08680 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RK88_RS08680 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RK88_RS08680 IPR023673 Ribosomal protein L1, conserved site RK88_RS08685 IPR020785 Ribosomal protein L11, conserved site RK88_RS08685 IPR020784 Ribosomal protein L11, N-terminal RK88_RS08685 IPR020783 Ribosomal protein L11, C-terminal RK88_RS08685 IPR006519 Ribosomal protein L11, bacterial-type RK88_RS08685 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily RK88_RS08685 IPR036769 Ribosomal protein L11, C-terminal domain superfamily RK88_RS08685 IPR000911 Ribosomal protein L11/L12 RK88_RS08690 IPR006645 NusG, N-terminal RK88_RS08690 IPR005824 KOW RK88_RS08690 IPR036735 NusG, N-terminal domain superfamily RK88_RS08690 IPR014722 Ribosomal protein L2, domain 2 RK88_RS08690 IPR001062 Transcription antitermination protein, NusG RK88_RS08690 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RK88_RS08690 IPR008991 Translation protein SH3-like domain superfamily RK88_RS08695 IPR005807 SecE subunit of protein translocation complex, bacterial-like RK88_RS08695 IPR038379 SecE superfamily RK88_RS08695 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit RK88_RS08700 IPR011332 Zinc-binding ribosomal protein RK88_RS08700 IPR018264 Ribosomal protein L33, conserved site RK88_RS08700 IPR038584 Ribosomal protein L33 superfamily RK88_RS08700 IPR001705 Ribosomal protein L33 RK88_RS08715 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK88_RS08715 IPR029028 Alpha/beta knot methyltransferases RK88_RS08715 IPR013123 RNA 2-O ribose methyltransferase, substrate binding RK88_RS08715 IPR029064 50S ribosomal protein L30e-like RK88_RS08715 IPR001537 tRNA/rRNA methyltransferase, SpoU type RK88_RS08715 IPR004441 RNA methyltransferase TrmH family RK88_RS08720 IPR008226 Mini-ribonuclease 3 family RK88_RS08720 IPR000999 Ribonuclease III domain RK88_RS08720 IPR036389 Ribonuclease III, endonuclease domain superfamily RK88_RS08725 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS08725 IPR015803 Cysteine-tRNA ligase RK88_RS08725 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR RK88_RS08725 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase RK88_RS08725 IPR032678 tRNA synthetases class I, catalytic domain RK88_RS08725 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RK88_RS08730 IPR001451 Hexapeptide repeat RK88_RS08730 IPR042122 Serine acetyltransferase, N-terminal domain superfamily RK88_RS08730 IPR011004 Trimeric LpxA-like superfamily RK88_RS08730 IPR005881 Serine O-acetyltransferase RK88_RS08740 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 RK88_RS08740 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain RK88_RS08740 IPR000924 Glutamyl/glutaminyl-tRNA synthetase RK88_RS08740 IPR033910 Glutamyl-tRNA synthetase RK88_RS08740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS08740 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial RK88_RS08740 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RK88_RS08740 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding RK88_RS08745 IPR029060 PIN-like domain superfamily RK88_RS08745 IPR002716 PIN domain RK88_RS08745 IPR002792 TRAM domain RK88_RS08750 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain RK88_RS08750 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS08750 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS08750 IPR041166 LapB, rubredoxin metal binding domain RK88_RS08750 IPR003593 AAA+ ATPase domain RK88_RS08750 IPR004504 DNA repair protein RadA RK88_RS08750 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08755 IPR019489 Clp ATPase, C-terminal RK88_RS08755 IPR001943 UVR domain RK88_RS08755 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08755 IPR003593 AAA+ ATPase domain RK88_RS08755 IPR003959 ATPase, AAA-type, core RK88_RS08755 IPR036628 Clp, N-terminal domain superfamily RK88_RS08755 IPR004176 Clp, N-terminal RK88_RS08755 IPR001270 ClpA/B family RK88_RS08755 IPR018368 ClpA/B, conserved site 1 RK88_RS08755 IPR041546 ClpA/ClpB, AAA lid domain RK88_RS08755 IPR028299 ClpA/B, conserved site 2 RK88_RS08760 IPR022414 ATP:guanido phosphotransferase, catalytic domain RK88_RS08760 IPR023660 Protein arginine kinase RK88_RS08760 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain RK88_RS08760 IPR000749 ATP:guanido phosphotransferase RK88_RS08760 IPR022415 ATP:guanido phosphotransferase active site RK88_RS08765 IPR001510 Zinc finger, PARP-type RK88_RS08765 IPR025542 YacH protein RK88_RS08765 IPR001943 UVR domain RK88_RS08770 IPR040465 CtsR, N-terminal HTH domain RK88_RS08770 IPR041902 CtsR, N-terminal domain superfamily RK88_RS08770 IPR041473 CtsR, C-terminal dimerization domain RK88_RS08770 IPR008463 Transcriptional regulator CtsR RK88_RS08770 IPR041908 CtsR, C-terminal domain superfamily RK88_RS08775 IPR008276 Concentrative nucleoside transporter RK88_RS08775 IPR011657 Concentrative nucleoside transporter C-terminal domain RK88_RS08775 IPR002668 Concentrative nucleoside transporter N-terminal domain RK88_RS08775 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial RK88_RS08785 IPR021196 PdxT/SNO family, conserved site RK88_RS08785 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO RK88_RS08785 IPR029062 Class I glutamine amidotransferase-like RK88_RS08790 IPR033755 PdxS/SNZ N-terminal domain RK88_RS08790 IPR011060 Ribulose-phosphate binding barrel RK88_RS08790 IPR013785 Aldolase-type TIM barrel RK88_RS08790 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ RK88_RS08795 IPR000524 Transcription regulator HTH, GntR RK88_RS08795 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS08795 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS08795 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS08795 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS08795 IPR004839 Aminotransferase, class I/classII RK88_RS08880 IPR012340 Nucleic acid-binding, OB-fold RK88_RS08880 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal RK88_RS08880 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II RK88_RS08880 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type RK88_RS08880 IPR006195 Aminoacyl-tRNA synthetase, class II RK88_RS08880 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) RK88_RS08880 IPR002313 Lysine-tRNA ligase, class II RK88_RS08890 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK RK88_RS08890 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily RK88_RS08895 IPR006157 Dihydroneopterin aldolase/epimerase domain RK88_RS08895 IPR006156 Dihydroneopterin aldolase RK88_RS08900 IPR000489 Pterin-binding domain RK88_RS08900 IPR011005 Dihydropteroate synthase-like RK88_RS08900 IPR006390 Dihydropteroate synthase RK88_RS08905 IPR001926 Pyridoxal-phosphate dependent enzyme RK88_RS08905 IPR005856 Cysteine synthase RK88_RS08905 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK88_RS08905 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RK88_RS08905 IPR005859 Cysteine synthase CysK RK88_RS08910 IPR016154 Heat shock protein Hsp33, C-terminal RK88_RS08910 IPR000397 Heat shock protein Hsp33 RK88_RS08910 IPR016153 Heat shock protein Hsp33, N-terminal RK88_RS08915 IPR037219 Peptidase M41-like RK88_RS08915 IPR000642 Peptidase M41 RK88_RS08915 IPR041569 AAA ATPase, AAA+ lid domain RK88_RS08915 IPR003959 ATPase, AAA-type, core RK88_RS08915 IPR003960 ATPase, AAA-type, conserved site RK88_RS08915 IPR011546 Peptidase M41, FtsH extracellular RK88_RS08915 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08915 IPR005936 Peptidase, FtsH RK88_RS08915 IPR003593 AAA+ ATPase domain RK88_RS08925 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal RK88_RS08925 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS08925 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal RK88_RS08925 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal RK88_RS08925 IPR012094 tRNA(Ile)-lysidine synthase RK88_RS08930 IPR003029 S1 domain RK88_RS08930 IPR022967 RNA-binding domain, S1 RK88_RS08930 IPR012340 Nucleic acid-binding, OB-fold RK88_RS08940 IPR002942 RNA-binding S4 domain RK88_RS08940 IPR025490 RNA-binding protein, HP1423 type RK88_RS08940 IPR036986 RNA-binding S4 domain superfamily RK88_RS08945 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RK88_RS08945 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted RK88_RS08945 IPR035013 YabN, N-terminal RK88_RS08945 IPR011551 NTP pyrophosphohydrolase MazG RK88_RS08945 IPR014777 Tetrapyrrole methylase, subdomain 1 RK88_RS08945 IPR035996 Tetrapyrrole methylase superfamily RK88_RS08945 IPR000878 Tetrapyrrole methylase RK88_RS08950 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain RK88_RS08950 IPR002797 Polysaccharide biosynthesis protein RK88_RS08950 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type RK88_RS08955 IPR001650 Helicase, C-terminal RK88_RS08955 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK88_RS08955 IPR036101 CarD-like/TRCF domain superfamily RK88_RS08955 IPR003711 CarD-like/TRCF domain RK88_RS08955 IPR004576 Transcription-repair coupling factor RK88_RS08955 IPR011545 DEAD/DEAH box helicase domain RK88_RS08955 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS08955 IPR037235 TRCF-like, C-terminal domain RK88_RS08955 IPR005118 Transcription-repair-coupling factor, C-terminal domain RK88_RS08955 IPR041471 UvrB, interaction domain RK88_RS08960 IPR018171 Peptidyl-tRNA hydrolase, conserved site RK88_RS08960 IPR001328 Peptidyl-tRNA hydrolase RK88_RS08960 IPR036416 Peptidyl-tRNA hydrolase superfamily RK88_RS08965 IPR001021 Ribosomal protein L25, long-form RK88_RS08965 IPR037121 Ribosomal protein L25, C-terminal RK88_RS08965 IPR020057 Ribosomal protein L25, beta domain RK88_RS08965 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily RK88_RS08965 IPR029751 Ribosomal protein L25 RK88_RS08965 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal RK88_RS08975 IPR000836 Phosphoribosyltransferase domain RK88_RS08975 IPR029057 Phosphoribosyltransferase-like RK88_RS08975 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain RK88_RS08975 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type RK88_RS08975 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site RK88_RS08975 IPR005946 Ribose-phosphate pyrophosphokinase RK88_RS08980 IPR011004 Trimeric LpxA-like superfamily RK88_RS08980 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase RK88_RS08980 IPR005835 Nucleotidyl transferase domain RK88_RS08980 IPR029044 Nucleotide-diphospho-sugar transferases RK88_RS08980 IPR018357 Hexapeptide transferase, conserved site RK88_RS08980 IPR001451 Hexapeptide repeat RK88_RS08980 IPR038009 GlmU, C-terminal LbH domain RK88_RS08990 IPR007170 Stage V sporulation protein G RK88_RS08990 IPR036751 Stage V sporulation protein G superfamily RK88_RS08995 IPR006056 RidA family RK88_RS08995 IPR019897 RidA, conserved site RK88_RS08995 IPR035959 RutC-like superfamily RK88_RS08995 IPR006175 YjgF/YER057c/UK114 family RK88_RS09000 IPR010078 Pur operon repressor RK88_RS09000 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS09000 IPR029057 Phosphoribosyltransferase-like RK88_RS09000 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS09000 IPR000836 Phosphoribosyltransferase domain RK88_RS09000 IPR015265 Bacterial purine repressor, N-terminal RK88_RS09005 IPR013750 GHMP kinase, C-terminal domain RK88_RS09005 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS09005 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS09005 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase RK88_RS09005 IPR006204 GHMP kinase N-terminal domain RK88_RS09005 IPR036554 GHMP kinase, C-terminal domain superfamily RK88_RS09010 IPR009366 Protein Veg RK88_RS09015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS09015 IPR011530 Ribosomal RNA adenine dimethylase RK88_RS09015 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal RK88_RS09015 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site RK88_RS09015 IPR023165 rRNA adenine dimethylase-like RK88_RS09015 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RK88_RS09020 IPR034141 Ribonuclease M5-like, TOPRIM domain RK88_RS09020 IPR004466 Ribonuclease M5 RK88_RS09020 IPR006171 TOPRIM domain RK88_RS09020 IPR025156 Ribonuclease M5, C-terminal domain RK88_RS09025 IPR001130 TatD family RK88_RS09025 IPR032466 Metal-dependent hydrolase RK88_RS09025 IPR018228 Deoxyribonuclease, TatD-related, conserved site RK88_RS09025 IPR015991 Uncharacterised hydrolase TatD-type RK88_RS09030 IPR033911 Methioninyl-tRNA synthetase core domain RK88_RS09030 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site RK88_RS09030 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding RK88_RS09030 IPR002547 tRNA-binding domain RK88_RS09030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS09030 IPR012340 Nucleic acid-binding, OB-fold RK88_RS09030 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding RK88_RS09030 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal RK88_RS09030 IPR014758 Methionyl-tRNA synthetase RK88_RS09030 IPR023457 Methionine-tRNA synthetase, type 2 RK88_RS09030 IPR015413 Methionyl/Leucyl tRNA synthetase RK88_RS09030 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain RK88_RS09035 IPR000878 Tetrapyrrole methylase RK88_RS09035 IPR018063 SAM-dependent methyltransferase RsmI, conserved site RK88_RS09035 IPR035996 Tetrapyrrole methylase superfamily RK88_RS09035 IPR008189 rRNA small subunit methyltransferase I RK88_RS09035 IPR014776 Tetrapyrrole methylase, subdomain 2 RK88_RS09035 IPR014777 Tetrapyrrole methylase, subdomain 1 RK88_RS09040 IPR000305 GIY-YIG endonuclease RK88_RS09040 IPR035901 GIY-YIG endonuclease superfamily RK88_RS09045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS09045 IPR007848 Methyltransferase small domain RK88_RS09050 IPR010377 Initiation control protein YabA RK88_RS09055 IPR007557 PSP1, C-terminal RK88_RS09060 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS09060 IPR015199 DNA polymerase III, delta subunit, C-terminal RK88_RS09060 IPR004622 DNA polymerase III, delta prime subunit RK88_RS09065 IPR010375 Cyclic-di-AMP receptor RK88_RS09065 IPR011322 Nitrogen regulatory PII-like, alpha/beta RK88_RS09065 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RK88_RS09070 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS09070 IPR039430 Thymidylate kinase-like domain RK88_RS09070 IPR018095 Thymidylate kinase, conserved site RK88_RS09070 IPR018094 Thymidylate kinase RK88_RS09075 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS09075 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily RK88_RS09075 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal RK88_RS09075 IPR000310 Orn/Lys/Arg decarboxylase, major domain RK88_RS09075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS09100 IPR034137 RecR, TOPRIM domain RK88_RS09100 IPR006171 TOPRIM domain RK88_RS09100 IPR015967 Recombination protein RecR, conserved site RK88_RS09100 IPR023628 Recombination protein RecR, C4-type zinc finger RK88_RS09100 IPR000093 DNA recombination protein RecR RK88_RS09100 IPR023627 Recombination protein RecR RK88_RS09105 IPR004401 Nucleoid-associated protein YbaB/EbfC family RK88_RS09105 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily RK88_RS09110 IPR022754 DNA polymerase III, gamma subunit, domain III RK88_RS09110 IPR012763 DNA polymerase III, subunit gamma/ tau RK88_RS09110 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal RK88_RS09110 IPR001270 ClpA/B family RK88_RS09110 IPR003593 AAA+ ATPase domain RK88_RS09110 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS09130 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS09130 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS09130 IPR011663 UbiC transcription regulator-associated RK88_RS09130 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RK88_RS09130 IPR000524 Transcription regulator HTH, GntR RK88_RS09130 IPR012770 Trehalose operon transcriptional repressor RK88_RS09135 IPR017853 Glycoside hydrolase superfamily RK88_RS09135 IPR006047 Glycosyl hydrolase, family 13, catalytic domain RK88_RS09135 IPR013780 Glycosyl hydrolase, all-beta RK88_RS09135 IPR012769 Trehalose-6-phosphate hydrolase RK88_RS09135 IPR032091 Maltogenic Amylase, C-terminal RK88_RS09140 IPR001996 Phosphotransferase system, IIB component, type 1 RK88_RS09140 IPR011296 Phosphotransferase system, trehalose-specific IIBC component RK88_RS09140 IPR013013 Phosphotransferase system, EIIC component, type 1 RK88_RS09140 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component RK88_RS09140 IPR036878 Glucose permease domain IIB RK88_RS09140 IPR003352 Phosphotransferase system, EIIC RK88_RS09140 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RK88_RS09150 IPR028261 Dihydroprymidine dehydrogenase domain II RK88_RS09150 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS09150 IPR023753 FAD/NAD(P)-binding domain RK88_RS09150 IPR009051 Alpha-helical ferredoxin RK88_RS09150 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 RK88_RS09155 IPR029055 Nucleophile aminohydrolases, N-terminal RK88_RS09155 IPR013785 Aldolase-type TIM barrel RK88_RS09155 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily RK88_RS09155 IPR002489 Glutamate synthase, alpha subunit, C-terminal RK88_RS09155 IPR006982 Glutamate synthase, central-N RK88_RS09155 IPR002932 Glutamate synthase domain RK88_RS09155 IPR017932 Glutamine amidotransferase type 2 domain RK88_RS09160 IPR000847 Transcription regulator HTH, LysR RK88_RS09160 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS09160 IPR005119 LysR, substrate-binding RK88_RS09160 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS09180 IPR020476 NUDIX hydrolase RK88_RS09180 IPR003561 Mutator MutT RK88_RS09180 IPR020084 NUDIX hydrolase, conserved site RK88_RS09180 IPR000086 NUDIX hydrolase domain RK88_RS09180 IPR015797 NUDIX hydrolase-like domain superfamily RK88_RS09190 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS09190 IPR007921 CHAP domain RK88_RS09190 IPR018392 LysM domain RK88_RS09190 IPR036779 LysM domain superfamily RK88_RS09195 IPR004872 Lipoprotein NlpA family RK88_RS09200 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS09200 IPR035906 MetI-like superfamily RK88_RS09205 IPR017871 ABC transporter, conserved site RK88_RS09205 IPR003593 AAA+ ATPase domain RK88_RS09205 IPR003439 ABC transporter-like RK88_RS09205 IPR026253 Methionine import ATP-binding protein MetN RK88_RS09205 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain RK88_RS09205 IPR018449 NIL domain RK88_RS09205 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS09205 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal RK88_RS09210 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS09210 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS09210 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RK88_RS09210 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS09215 IPR001926 Pyridoxal-phosphate dependent enzyme RK88_RS09215 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK88_RS09215 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RK88_RS09220 IPR000175 Sodium:neurotransmitter symporter RK88_RS09220 IPR037272 Sodium:neurotransmitter symporter superfamily RK88_RS09230 IPR022742 Serine aminopeptidase, S33 RK88_RS09230 IPR029058 Alpha/Beta hydrolase fold RK88_RS09230 IPR012354 Esterase/lipase RK88_RS09245 IPR018745 Domain of unknown function DUF2294 RK88_RS09250 IPR018752 Uncharacterised protein family UPF0753 RK88_RS09255 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal RK88_RS09255 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit RK88_RS09275 IPR031429 Phenol-soluble modulin alpha 4 peptide RK88_RS09280 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS09280 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK88_RS09280 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RK88_RS09305 IPR038641 Csa superfamily RK88_RS09305 IPR007595 Csa family RK88_RS09310 IPR007595 Csa family RK88_RS09310 IPR038641 Csa superfamily RK88_RS09315 IPR007595 Csa family RK88_RS09315 IPR038641 Csa superfamily RK88_RS09320 IPR007595 Csa family RK88_RS09320 IPR038641 Csa superfamily RK88_RS09330 IPR007595 Csa family RK88_RS09330 IPR038641 Csa superfamily RK88_RS09335 IPR038641 Csa superfamily RK88_RS09335 IPR007595 Csa family RK88_RS09350 IPR008992 Enterotoxin RK88_RS09350 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS09350 IPR008375 Staphylococcus aureus exotoxin RK88_RS09350 IPR016091 Superantigen toxin, C-terminal RK88_RS09350 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS09350 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS09350 IPR015282 Staphylococcal superantigen-like OB-fold domain RK88_RS09360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS09360 IPR004546 Restriction endonuclease, type I, HsdM RK88_RS09360 IPR002052 DNA methylase, N-6 adenine-specific, conserved site RK88_RS09360 IPR003356 DNA methylase, adenine-specific RK88_RS09360 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily RK88_RS09360 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RK88_RS09370 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS09370 IPR008375 Staphylococcus aureus exotoxin RK88_RS09370 IPR015282 Staphylococcal superantigen-like OB-fold domain RK88_RS09370 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS09370 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS09370 IPR016091 Superantigen toxin, C-terminal RK88_RS09370 IPR008992 Enterotoxin RK88_RS09375 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS09375 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS09375 IPR016091 Superantigen toxin, C-terminal RK88_RS09375 IPR008375 Staphylococcus aureus exotoxin RK88_RS09375 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS09375 IPR008992 Enterotoxin RK88_RS09375 IPR015282 Staphylococcal superantigen-like OB-fold domain RK88_RS09380 IPR015282 Staphylococcal superantigen-like OB-fold domain RK88_RS09380 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS09380 IPR008992 Enterotoxin RK88_RS09380 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS09380 IPR016091 Superantigen toxin, C-terminal RK88_RS09380 IPR008375 Staphylococcus aureus exotoxin RK88_RS09380 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS09385 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS09385 IPR008992 Enterotoxin RK88_RS09385 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS09385 IPR015282 Staphylococcal superantigen-like OB-fold domain RK88_RS09385 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS09385 IPR008375 Staphylococcus aureus exotoxin RK88_RS09385 IPR016091 Superantigen toxin, C-terminal RK88_RS09390 IPR016091 Superantigen toxin, C-terminal RK88_RS09390 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS09390 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS09390 IPR008375 Staphylococcus aureus exotoxin RK88_RS09390 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS09390 IPR015282 Staphylococcal superantigen-like OB-fold domain RK88_RS09390 IPR008992 Enterotoxin RK88_RS09395 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS09395 IPR016091 Superantigen toxin, C-terminal RK88_RS09395 IPR008375 Staphylococcus aureus exotoxin RK88_RS09395 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS09395 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS09395 IPR008992 Enterotoxin RK88_RS09395 IPR015282 Staphylococcal superantigen-like OB-fold domain RK88_RS09400 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS09400 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS09400 IPR008375 Staphylococcus aureus exotoxin RK88_RS09400 IPR008992 Enterotoxin RK88_RS09400 IPR015282 Staphylococcal superantigen-like OB-fold domain RK88_RS09400 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site RK88_RS09400 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS09400 IPR008375 Staphylococcus aureus exotoxin RK88_RS09400 IPR016091 Superantigen toxin, C-terminal RK88_RS09400 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS09400 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS09400 IPR016091 Superantigen toxin, C-terminal RK88_RS09400 IPR008992 Enterotoxin RK88_RS09400 IPR015282 Staphylococcal superantigen-like OB-fold domain RK88_RS09405 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK88_RS09405 IPR016091 Superantigen toxin, C-terminal RK88_RS09405 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain RK88_RS09405 IPR008375 Staphylococcus aureus exotoxin RK88_RS09405 IPR015282 Staphylococcal superantigen-like OB-fold domain RK88_RS09405 IPR008992 Enterotoxin RK88_RS09420 IPR009732 Protein of unknown function DUF1304 RK88_RS09435 IPR002514 Transposase IS3/IS911family RK88_RS09435 IPR009057 Homeobox-like domain superfamily RK88_RS09455 IPR029062 Class I glutamine amidotransferase-like RK88_RS09455 IPR017926 Glutamine amidotransferase RK88_RS09455 IPR001674 GMP synthase, C-terminal RK88_RS09455 IPR004739 GMP synthase, glutamine amidotransferase RK88_RS09455 IPR022955 GMP synthase RK88_RS09455 IPR025777 GMP synthetase ATP pyrophosphatase domain RK88_RS09455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS09460 IPR015875 IMP dehydrogenase / GMP reductase, conserved site RK88_RS09460 IPR001093 IMP dehydrogenase/GMP reductase RK88_RS09460 IPR013785 Aldolase-type TIM barrel RK88_RS09460 IPR005990 Inosine-5'-monophosphate dehydrogenase RK88_RS09460 IPR000644 CBS domain RK88_RS09465 IPR017588 Uric acid permease UacT-like RK88_RS09465 IPR006042 Xanthine/uracil permease RK88_RS09465 IPR006043 Xanthine/uracil/vitamin C permease RK88_RS09470 IPR000836 Phosphoribosyltransferase domain RK88_RS09470 IPR029057 Phosphoribosyltransferase-like RK88_RS09470 IPR010079 Xanthine phosphoribosyltransferase RK88_RS09475 IPR025889 General stress protein 17M-like domain RK88_RS09500 IPR036458 Sodium:dicarboxylate symporter superfamily RK88_RS09500 IPR001991 Sodium:dicarboxylate symporter RK88_RS09505 IPR000415 Nitroreductase-like RK88_RS09505 IPR016446 Flavin oxidoreductase Frp family RK88_RS09505 IPR029479 Nitroreductase RK88_RS09510 IPR036249 Thioredoxin-like superfamily RK88_RS09510 IPR019479 Peroxiredoxin, C-terminal RK88_RS09510 IPR024706 Peroxiredoxin, AhpC-type RK88_RS09510 IPR017559 Alkyl hydroperoxide reductase subunit C RK88_RS09510 IPR013766 Thioredoxin domain RK88_RS09510 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant RK88_RS09515 IPR002109 Glutaredoxin RK88_RS09515 IPR023753 FAD/NAD(P)-binding domain RK88_RS09515 IPR012336 Thioredoxin-like fold RK88_RS09515 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS09515 IPR036249 Thioredoxin-like superfamily RK88_RS09515 IPR012081 Alkyl hydroperoxide reductase subunit F RK88_RS09515 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site RK88_RS09600 IPR038713 Terminase small subunit, N-terminal domain superfamily RK88_RS09600 IPR005335 Terminase small subunit RK88_RS09600 IPR018925 Phage terminase small subunit RK88_RS09690 IPR036870 Ribosomal protein S18 superfamily RK88_RS09690 IPR018275 Ribosomal protein S18, conserved site RK88_RS09690 IPR001648 Ribosomal protein S18 RK88_RS09695 IPR000424 Primosome PriB/single-strand DNA-binding RK88_RS09695 IPR012340 Nucleic acid-binding, OB-fold RK88_RS09695 IPR011344 Single-stranded DNA-binding protein RK88_RS09700 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RK88_RS09700 IPR035980 Ribosomal protein S6 superfamily RK88_RS09700 IPR000529 Ribosomal protein S6 RK88_RS09700 IPR020815 Ribosomal protein S6, conserved site RK88_RS09700 IPR020814 Ribosomal protein S6, plastid/chloroplast RK88_RS09715 IPR031167 OBG-type guanine nucleotide-binding (G) domain RK88_RS09715 IPR006073 GTP binding domain RK88_RS09715 IPR041706 YchF, N-terminal RK88_RS09715 IPR023192 TGS-like domain superfamily RK88_RS09715 IPR013029 YchF, C-terminal domain RK88_RS09715 IPR012675 Beta-grasp domain superfamily RK88_RS09715 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 RK88_RS09715 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS09715 IPR004095 TGS RK88_RS09715 IPR012676 TGS-like RK88_RS09720 IPR009296 Protein of unknown function DUF951 RK88_RS09725 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 RK88_RS09725 IPR010920 LSM domain superfamily RK88_RS09725 IPR011066 Mechanosensitive ion channel MscS, C-terminal RK88_RS09725 IPR023408 Mechanosensitive ion channel MscS domain superfamily RK88_RS09725 IPR006685 Mechanosensitive ion channel MscS RK88_RS09730 IPR036086 ParB/Sulfiredoxin superfamily RK88_RS09730 IPR041468 ParB/Spo0J, HTH domain RK88_RS09730 IPR003115 ParB/Sulfiredoxin RK88_RS09730 IPR004437 ParB/RepB/Spo0J partition protein RK88_RS09740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS09740 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS09740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS09740 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RK88_RS09745 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS09745 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS09745 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS09745 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme RK88_RS09750 IPR003726 Homocysteine-binding domain RK88_RS09750 IPR003171 Methylenetetrahydrofolate reductase RK88_RS09750 IPR029041 FAD-linked oxidoreductase-like RK88_RS09750 IPR036589 Homocysteine-binding domain superfamily RK88_RS09755 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal RK88_RS09755 IPR038071 UROD/MetE-like superfamily RK88_RS09755 IPR006276 Cobalamin-independent methionine synthase RK88_RS09755 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal RK88_RS09765 IPR020610 Thiolase, active site RK88_RS09765 IPR020617 Thiolase, C-terminal RK88_RS09765 IPR020616 Thiolase, N-terminal RK88_RS09765 IPR020613 Thiolase, conserved site RK88_RS09765 IPR002155 Thiolase RK88_RS09765 IPR016039 Thiolase-like RK88_RS09765 IPR020615 Thiolase, acyl-enzyme intermediate active site RK88_RS09780 IPR003439 ABC transporter-like RK88_RS09780 IPR003593 AAA+ ATPase domain RK88_RS09780 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS09780 IPR015851 ABC transporter, NodI RK88_RS09790 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RK88_RS09790 IPR001387 Cro/C1-type helix-turn-helix domain RK88_RS09800 IPR006312 Sec-independent protein translocase protein TatA/E RK88_RS09800 IPR003369 Sec-independent protein translocase protein TatA/B/E RK88_RS09805 IPR002033 Sec-independent periplasmic protein translocase TatC RK88_RS09805 IPR019820 Sec-independent periplasmic protein translocase, conserved site RK88_RS09810 IPR004923 Iron permease FTR1/Fip1/EfeU RK88_RS09815 IPR006314 Dyp-type peroxidase RK88_RS09815 IPR006313 Deferrochelatase/peroxidase EfeB RK88_RS09815 IPR006311 Twin-arginine translocation pathway, signal sequence RK88_RS09815 IPR011008 Dimeric alpha-beta barrel RK88_RS09820 IPR038352 Imelysin-like domain superfamily RK88_RS09820 IPR034981 EfeO/Algp7, imelysin-like domain RK88_RS09820 IPR018976 Imelysin-like domain RK88_RS09825 IPR000182 GNAT domain RK88_RS09825 IPR016181 Acyl-CoA N-acyltransferase RK88_RS09835 IPR018383 Uncharacterised protein family UPF0324, prokaryote RK88_RS09845 IPR011251 Luciferase-like domain RK88_RS09845 IPR036661 Luciferase-like domain superfamily RK88_RS09850 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK88_RS09850 IPR037523 Vicinal oxygen chelate (VOC) domain RK88_RS09850 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK88_RS09855 IPR011701 Major facilitator superfamily RK88_RS09855 IPR020846 Major facilitator superfamily domain RK88_RS09855 IPR036259 MFS transporter superfamily RK88_RS09855 IPR021159 Glycerate/sugar phosphate transporter, conserved site RK88_RS09855 IPR000849 Sugar phosphate transporter RK88_RS09855 IPR005267 Glycerol-3-phosphate transporter RK88_RS09865 IPR002528 Multi antimicrobial extrusion protein RK88_RS09880 IPR004341 CAT RNA-binding domain RK88_RS09880 IPR036650 CAT RNA-binding domain superfamily RK88_RS09880 IPR011608 PRD domain RK88_RS09880 IPR036634 PRD domain superfamily RK88_RS09880 IPR001550 Transcription antiterminator, conserved site RK88_RS09885 IPR016152 Phosphotransferase/anion transporter RK88_RS09885 IPR002178 PTS EIIA type-2 domain RK88_RS09895 IPR004703 Phosphotransferase system, sugar-specific permease component RK88_RS09900 IPR036291 NAD(P)-binding domain superfamily RK88_RS09900 IPR016040 NAD(P)-binding domain RK88_RS09905 IPR004562 Lipoyltransferase/lipoate-protein ligase RK88_RS09905 IPR019491 Lipoate protein ligase, C-terminal RK88_RS09905 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain RK88_RS09910 IPR026590 Sirtuin family, catalytic core domain RK88_RS09910 IPR026591 Sirtuin, catalytic core small domain superfamily RK88_RS09910 IPR029035 DHS-like NAD/FAD-binding domain superfamily RK88_RS09915 IPR035801 Protein-ADP-ribose hydrolase, macro domain RK88_RS09915 IPR002589 Macro domain RK88_RS09920 IPR011053 Single hybrid motif RK88_RS09920 IPR033753 Glycine cleavage system H-protein/Simiate RK88_RS09920 IPR002930 Glycine cleavage system H-protein RK88_RS09920 IPR000089 Biotin/lipoyl attachment RK88_RS09925 IPR011251 Luciferase-like domain RK88_RS09925 IPR036661 Luciferase-like domain superfamily RK88_RS09925 IPR019949 Luciferase family oxidoreductase, group 1 RK88_RS09935 IPR013785 Aldolase-type TIM barrel RK88_RS09935 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal RK88_RS09960 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RK88_RS09960 IPR007921 CHAP domain RK88_RS09960 IPR003646 SH3-like domain, bacterial-type RK88_RS09960 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS09960 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily RK88_RS10005 IPR016047 Peptidase M23 RK88_RS10005 IPR011055 Duplicated hybrid motif RK88_RS10005 IPR007340 Opacity-associated protein A RK88_RS10060 IPR006427 Phage portal protein, HK97 RK88_RS10060 IPR006944 Bacteriophage/Gene transfer agent portal protein RK88_RS10185 IPR007693 DNA helicase, DnaB-like, N-terminal RK88_RS10185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS10185 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RK88_RS10185 IPR007694 DNA helicase, DnaB-like, C-terminal RK88_RS10185 IPR007692 DNA helicase, DnaB type RK88_RS10185 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily RK88_RS10185 IPR003593 AAA+ ATPase domain RK88_RS10205 IPR011344 Single-stranded DNA-binding protein RK88_RS10205 IPR000424 Primosome PriB/single-strand DNA-binding RK88_RS10205 IPR012340 Nucleic acid-binding, OB-fold RK88_RS10290 IPR004107 Integrase, SAM-like, N-terminal RK88_RS10290 IPR013762 Integrase-like, catalytic domain superfamily RK88_RS10290 IPR011010 DNA breaking-rejoining enzyme, catalytic core RK88_RS10290 IPR002104 Integrase, catalytic domain RK88_RS10290 IPR010998 Integrase/recombinase, N-terminal RK88_RS10305 IPR011060 Ribulose-phosphate binding barrel RK88_RS10305 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase RK88_RS10305 IPR013785 Aldolase-type TIM barrel RK88_RS10310 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS10310 IPR009057 Homeobox-like domain superfamily RK88_RS10310 IPR000281 Helix-turn-helix protein RpiR RK88_RS10310 IPR001347 Sugar isomerase (SIS) RK88_RS10310 IPR035472 RpiR-like, SIS domain RK88_RS10315 IPR000600 ROK family RK88_RS10315 IPR023945 N-acetylmannosamine kinase, bacterial RK88_RS10320 IPR013785 Aldolase-type TIM barrel RK88_RS10320 IPR020625 Schiff base-forming aldolase, active site RK88_RS10320 IPR005264 N-acetylneuraminate lyase RK88_RS10320 IPR002220 DapA-like RK88_RS10325 IPR038377 Sodium/glucose symporter superfamily RK88_RS10325 IPR001734 Sodium/solute symporter RK88_RS10330 IPR011657 Concentrative nucleoside transporter C-terminal domain RK88_RS10330 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial RK88_RS10330 IPR002668 Concentrative nucleoside transporter N-terminal domain RK88_RS10330 IPR008276 Concentrative nucleoside transporter RK88_RS10335 IPR007342 Pseudouridine-5'-phosphate glycosidase RK88_RS10335 IPR022830 Indigoidine synthase A-like RK88_RS10355 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS10355 IPR003439 ABC transporter-like RK88_RS10355 IPR003593 AAA+ ATPase domain RK88_RS10360 IPR003838 ABC transporter permease protein domain RK88_RS10370 IPR006423 5-nucleotidase lipoprotein e(P4) RK88_RS10370 IPR005519 Acid phosphatase, class B-like RK88_RS10370 IPR023214 HAD superfamily RK88_RS10370 IPR036412 HAD-like superfamily RK88_RS10380 IPR004685 Branched-chain amino acid transport system II carrier protein RK88_RS10410 IPR006728 Protein of unknown function DUF600 RK88_RS10410 IPR036170 Probable antitoxin YezG superfamily RK88_RS10415 IPR036170 Probable antitoxin YezG superfamily RK88_RS10415 IPR006728 Protein of unknown function DUF600 RK88_RS10460 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS10460 IPR008984 SMAD/FHA domain superfamily RK88_RS10460 IPR002543 FtsK domain RK88_RS10460 IPR022206 Firmicutes EssC, N-terminal RK88_RS10460 IPR023839 Firmicutes EssC, C-terminal RK88_RS10465 IPR018778 Type VII secretion system EssB RK88_RS10470 IPR014921 EsaB RK88_RS10470 IPR029071 Ubiquitin-like domain superfamily RK88_RS10470 IPR024962 YukD-like RK88_RS10475 IPR018920 ESAT-6 secretion machinery protein EssA/YueC RK88_RS10475 IPR034026 ESAT-6 secretion machinery protein EssA RK88_RS10480 IPR023838 Type VII secretion system EsaA RK88_RS10485 IPR010310 Type VII secretion system ESAT-6-like RK88_RS10485 IPR036689 ESAT-6-like superfamily RK88_RS10490 IPR007921 CHAP domain RK88_RS10490 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS10490 IPR036779 LysM domain superfamily RK88_RS10490 IPR018392 LysM domain RK88_RS10510 IPR022501 Gallidermin ABC transporter, ATP-binding subunit RK88_RS10510 IPR003593 AAA+ ATPase domain RK88_RS10510 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS10510 IPR017871 ABC transporter, conserved site RK88_RS10510 IPR003439 ABC transporter-like RK88_RS10515 IPR016047 Peptidase M23 RK88_RS10515 IPR011055 Duplicated hybrid motif RK88_RS10520 IPR029132 Choloylglycine hydrolase/NAAA C-terminal RK88_RS10520 IPR029055 Nucleophile aminohydrolases, N-terminal RK88_RS10525 IPR011701 Major facilitator superfamily RK88_RS10525 IPR036259 MFS transporter superfamily RK88_RS10525 IPR020846 Major facilitator superfamily domain RK88_RS10535 IPR001761 Periplasmic binding protein/LacI sugar binding domain RK88_RS10535 IPR000843 LacI-type HTH domain RK88_RS10535 IPR010982 Lambda repressor-like, DNA-binding domain superfamily RK88_RS10535 IPR023588 Transcription regulator HTH, PurR RK88_RS10535 IPR028082 Periplasmic binding protein-like I RK88_RS10540 IPR010651 Sugar transport protein RK88_RS10545 IPR023750 RbsD-like superfamily RK88_RS10545 IPR023064 D-ribose pyranase RK88_RS10545 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU RK88_RS10550 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RK88_RS10550 IPR011877 Ribokinase RK88_RS10550 IPR029056 Ribokinase-like RK88_RS10550 IPR011611 Carbohydrate kinase PfkB RK88_RS10550 IPR002139 Ribokinase/fructokinase RK88_RS10560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS10560 IPR041698 Methyltransferase domain 25 RK88_RS10570 IPR001360 Glycoside hydrolase family 1 RK88_RS10570 IPR017853 Glycoside hydrolase superfamily RK88_RS10570 IPR018120 Glycoside hydrolase family 1, active site RK88_RS10570 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RK88_RS10575 IPR011055 Duplicated hybrid motif RK88_RS10575 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RK88_RS10575 IPR013013 Phosphotransferase system, EIIC component, type 1 RK88_RS10575 IPR036878 Glucose permease domain IIB RK88_RS10575 IPR003352 Phosphotransferase system, EIIC RK88_RS10575 IPR001996 Phosphotransferase system, IIB component, type 1 RK88_RS10575 IPR011299 PTS system glucose-specific IIBC component RK88_RS10575 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 RK88_RS10585 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS10585 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS10585 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS10585 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS10585 IPR004839 Aminotransferase, class I/classII RK88_RS10585 IPR000524 Transcription regulator HTH, GntR RK88_RS10590 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site RK88_RS10590 IPR023616 Cytochrome c oxidase-like, subunit I domain RK88_RS10590 IPR000883 Cytochrome c oxidase subunit I RK88_RS10590 IPR036927 Cytochrome c oxidase-like, subunit I superfamily RK88_RS10595 IPR007300 CidB/LrgB family RK88_RS10595 IPR024891 Antiholin-like protein LrgB RK88_RS10600 IPR005538 LrgA/CidA family RK88_RS10600 IPR023736 Antiholin-like protein LrgA RK88_RS10605 IPR001789 Signal transduction response regulator, receiver domain RK88_RS10605 IPR007492 LytTR DNA-binding domain RK88_RS10605 IPR011006 CheY-like superfamily RK88_RS10610 IPR003018 GAF domain RK88_RS10610 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region RK88_RS10610 IPR010559 Signal transduction histidine kinase, internal region RK88_RS10610 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS10610 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS10615 IPR023551 Iron-sulfur cluster repair protein ScdA RK88_RS10615 IPR019903 Repair of iron centres family RK88_RS10615 IPR038062 ScdA-like, N-terminal domain superfamily RK88_RS10615 IPR012312 Haemerythrin-like RK88_RS10620 IPR001173 Glycosyltransferase 2-like RK88_RS10620 IPR029044 Nucleotide-diphospho-sugar transferases RK88_RS10620 IPR041038 TarS beta-glycosyltransferase C-terminal domain 1 RK88_RS10625 IPR007554 CDP-glycerol glycerophosphotransferase RK88_RS10630 IPR013154 Alcohol dehydrogenase, N-terminal RK88_RS10630 IPR013149 Alcohol dehydrogenase, C-terminal RK88_RS10630 IPR034710 Ribulose-5-phosphate reductase RK88_RS10630 IPR036291 NAD(P)-binding domain superfamily RK88_RS10630 IPR011032 GroES-like superfamily RK88_RS10635 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site RK88_RS10635 IPR034683 Cytidylyltransferase IspD/TarI RK88_RS10635 IPR034709 Ribitol-5-phosphate cytidylyltransferase RK88_RS10635 IPR029044 Nucleotide-diphospho-sugar transferases RK88_RS10640 IPR007554 CDP-glycerol glycerophosphotransferase RK88_RS10650 IPR007554 CDP-glycerol glycerophosphotransferase RK88_RS10655 IPR034710 Ribulose-5-phosphate reductase RK88_RS10655 IPR013154 Alcohol dehydrogenase, N-terminal RK88_RS10655 IPR013149 Alcohol dehydrogenase, C-terminal RK88_RS10655 IPR036291 NAD(P)-binding domain superfamily RK88_RS10655 IPR011032 GroES-like superfamily RK88_RS10660 IPR034683 Cytidylyltransferase IspD/TarI RK88_RS10660 IPR029044 Nucleotide-diphospho-sugar transferases RK88_RS10660 IPR034709 Ribitol-5-phosphate cytidylyltransferase RK88_RS10660 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site RK88_RS10675 IPR011032 GroES-like superfamily RK88_RS10675 IPR020843 Polyketide synthase, enoylreductase domain RK88_RS10675 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site RK88_RS10675 IPR013149 Alcohol dehydrogenase, C-terminal RK88_RS10675 IPR013154 Alcohol dehydrogenase, N-terminal RK88_RS10675 IPR036291 NAD(P)-binding domain superfamily RK88_RS10680 IPR013853 Galactitol permease IIC component RK88_RS10680 IPR013014 Phosphotransferase system, EIIC component, type 2 RK88_RS10680 IPR004703 Phosphotransferase system, sugar-specific permease component RK88_RS10685 IPR013011 Phosphotransferase system, EIIB component, type 2 RK88_RS10685 IPR036095 PTS system IIB component-like superfamily RK88_RS10685 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RK88_RS10705 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA RK88_RS10705 IPR023186 Inosine/uridine-preferring nucleoside hydrolase RK88_RS10705 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site RK88_RS10705 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RK88_RS10705 IPR036452 Ribonucleoside hydrolase-like RK88_RS10710 IPR011299 PTS system glucose-specific IIBC component RK88_RS10710 IPR001996 Phosphotransferase system, IIB component, type 1 RK88_RS10710 IPR013013 Phosphotransferase system, EIIC component, type 1 RK88_RS10710 IPR003352 Phosphotransferase system, EIIC RK88_RS10710 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 RK88_RS10710 IPR011055 Duplicated hybrid motif RK88_RS10710 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RK88_RS10710 IPR036878 Glucose permease domain IIB RK88_RS10720 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RK88_RS10720 IPR022383 Lactate/malate dehydrogenase, C-terminal RK88_RS10720 IPR001557 L-lactate/malate dehydrogenase RK88_RS10720 IPR036291 NAD(P)-binding domain superfamily RK88_RS10720 IPR011304 L-lactate dehydrogenase RK88_RS10720 IPR018177 L-lactate dehydrogenase, active site RK88_RS10720 IPR001236 Lactate/malate dehydrogenase, N-terminal RK88_RS10730 IPR023950 Flavohemoprotein RK88_RS10730 IPR012292 Globin/Protoglobin RK88_RS10730 IPR009050 Globin-like superfamily RK88_RS10730 IPR000971 Globin RK88_RS10730 IPR001433 Oxidoreductase FAD/NAD(P)-binding RK88_RS10730 IPR017927 FAD-binding domain, ferredoxin reductase-type RK88_RS10730 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain RK88_RS10730 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RK88_RS10730 IPR017938 Riboflavin synthase-like beta-barrel RK88_RS10745 IPR007438 Protein of unknown function DUF488 RK88_RS10750 IPR000914 Solute-binding protein family 5 domain RK88_RS10750 IPR039424 Solute-binding protein family 5 RK88_RS10750 IPR030678 Peptide/nickel binding protein, MppA-type RK88_RS10765 IPR014388 3-oxoacid CoA-transferase RK88_RS10765 IPR037171 NagB/RpiA transferase-like RK88_RS10765 IPR004165 Coenzyme A transferase family I RK88_RS10770 IPR025110 AMP-binding enzyme, C-terminal domain RK88_RS10770 IPR020459 AMP-binding RK88_RS10770 IPR020845 AMP-binding, conserved site RK88_RS10770 IPR042099 AMP-dependent synthetase-like superfamily RK88_RS10770 IPR000873 AMP-dependent synthetase/ligase RK88_RS10775 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RK88_RS10775 IPR006089 Acyl-CoA dehydrogenase, conserved site RK88_RS10775 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RK88_RS10775 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RK88_RS10775 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RK88_RS10775 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RK88_RS10775 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RK88_RS10780 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RK88_RS10780 IPR036291 NAD(P)-binding domain superfamily RK88_RS10780 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RK88_RS10780 IPR022694 3-hydroxyacyl-CoA dehydrogenase RK88_RS10780 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal RK88_RS10780 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding RK88_RS10785 IPR002155 Thiolase RK88_RS10785 IPR016039 Thiolase-like RK88_RS10785 IPR020616 Thiolase, N-terminal RK88_RS10785 IPR020610 Thiolase, active site RK88_RS10785 IPR020617 Thiolase, C-terminal RK88_RS10785 IPR020615 Thiolase, acyl-enzyme intermediate active site RK88_RS10785 IPR020613 Thiolase, conserved site RK88_RS10795 IPR014874 Staphylcoagulase, N-terminal RK88_RS10795 IPR001443 Staphylocoagulase repeat RK88_RS10810 IPR034457 Organic radical-activating enzymes RK88_RS10810 IPR040074 BssD/PflA/YjjW RK88_RS10810 IPR007197 Radical SAM RK88_RS10810 IPR001989 Radical-activating enzyme, conserved site RK88_RS10810 IPR034465 Pyruvate formate-lyase activase RK88_RS10810 IPR013785 Aldolase-type TIM barrel RK88_RS10810 IPR012838 Pyruvate formate-lyase 1 activating enzyme RK88_RS10810 IPR012839 Organic radical enzyme activase RK88_RS10815 IPR004184 Pyruvate formate lyase domain RK88_RS10815 IPR001150 Glycine radical domain RK88_RS10815 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RK88_RS10815 IPR005949 Formate acetyltransferase RK88_RS10825 IPR010559 Signal transduction histidine kinase, internal region RK88_RS10825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS10830 IPR018060 DNA binding HTH domain, AraC-type RK88_RS10830 IPR009057 Homeobox-like domain superfamily RK88_RS10830 IPR011006 CheY-like superfamily RK88_RS10830 IPR001789 Signal transduction response regulator, receiver domain RK88_RS10835 IPR000849 Sugar phosphate transporter RK88_RS10835 IPR020846 Major facilitator superfamily domain RK88_RS10835 IPR036259 MFS transporter superfamily RK88_RS10835 IPR021159 Glycerate/sugar phosphate transporter, conserved site RK88_RS10835 IPR011701 Major facilitator superfamily RK88_RS10840 IPR007269 Isoprenylcysteine carboxyl methyltransferase RK88_RS10850 IPR000683 Oxidoreductase, N-terminal RK88_RS10850 IPR004104 Oxidoreductase, C-terminal RK88_RS10850 IPR036291 NAD(P)-binding domain superfamily RK88_RS10855 IPR004104 Oxidoreductase, C-terminal RK88_RS10855 IPR006311 Twin-arginine translocation pathway, signal sequence RK88_RS10855 IPR000683 Oxidoreductase, N-terminal RK88_RS10855 IPR008354 Glucose-fructose oxidoreductase, bacterial RK88_RS10855 IPR036291 NAD(P)-binding domain superfamily RK88_RS10860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS10860 IPR035906 MetI-like superfamily RK88_RS10865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS10865 IPR035906 MetI-like superfamily RK88_RS10875 IPR005116 Transport-associated OB, type 1 RK88_RS10875 IPR040582 MalK, OB fold domain RK88_RS10875 IPR008995 Molybdate/tungstate binding, C-terminal RK88_RS10875 IPR017871 ABC transporter, conserved site RK88_RS10875 IPR003439 ABC transporter-like RK88_RS10875 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS10875 IPR003593 AAA+ ATPase domain RK88_RS10880 IPR003646 SH3-like domain, bacterial-type RK88_RS10880 IPR011055 Duplicated hybrid motif RK88_RS10880 IPR016047 Peptidase M23 RK88_RS10885 IPR023048 NADH-azoreductase, FMN-dependent RK88_RS10885 IPR029039 Flavoprotein-like superfamily RK88_RS10885 IPR003680 Flavodoxin-like fold RK88_RS10890 IPR000101 Gamma-glutamyltranspeptidase RK88_RS10890 IPR029055 Nucleophile aminohydrolases, N-terminal RK88_RS10900 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS10900 IPR035906 MetI-like superfamily RK88_RS10900 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RK88_RS10910 IPR003439 ABC transporter-like RK88_RS10910 IPR017871 ABC transporter, conserved site RK88_RS10910 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS10910 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal RK88_RS10910 IPR003593 AAA+ ATPase domain RK88_RS10920 IPR040980 SWI2/SNF2 ATPase RK88_RS10920 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK88_RS10920 IPR022625 Type-1 restriction enzyme R protein, C-terminal RK88_RS10920 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS10920 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal RK88_RS10920 IPR004473 Restriction endonuclease, type I, HsdR RK88_RS10930 IPR000281 Helix-turn-helix protein RpiR RK88_RS10930 IPR035472 RpiR-like, SIS domain RK88_RS10930 IPR001347 Sugar isomerase (SIS) RK88_RS10930 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS10930 IPR009057 Homeobox-like domain superfamily RK88_RS10935 IPR013013 Phosphotransferase system, EIIC component, type 1 RK88_RS10935 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RK88_RS10935 IPR036878 Glucose permease domain IIB RK88_RS10935 IPR001996 Phosphotransferase system, IIB component, type 1 RK88_RS10935 IPR003352 Phosphotransferase system, EIIC RK88_RS10940 IPR005486 Glucokinase regulatory protein, conserved site RK88_RS10940 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ RK88_RS10940 IPR001347 Sugar isomerase (SIS) RK88_RS10940 IPR000408 Regulator of chromosome condensation, RCC1 RK88_RS10940 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein RK88_RS10950 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 RK88_RS10950 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RK88_RS10950 IPR013013 Phosphotransferase system, EIIC component, type 1 RK88_RS10950 IPR036878 Glucose permease domain IIB RK88_RS10950 IPR011055 Duplicated hybrid motif RK88_RS10950 IPR001996 Phosphotransferase system, IIB component, type 1 RK88_RS10950 IPR011299 PTS system glucose-specific IIBC component RK88_RS10950 IPR003352 Phosphotransferase system, EIIC RK88_RS10960 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae RK88_RS10960 IPR029061 Thiamin diphosphate-binding fold RK88_RS10960 IPR012000 Thiamine pyrophosphate enzyme, central domain RK88_RS10960 IPR000399 TPP-binding enzyme, conserved site RK88_RS10960 IPR029035 DHS-like NAD/FAD-binding domain superfamily RK88_RS10960 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme RK88_RS10960 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RK88_RS10960 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RK88_RS10965 IPR000868 Isochorismatase-like RK88_RS10965 IPR016291 Isochorismatase RK88_RS10965 IPR036380 Isochorismatase-like superfamily RK88_RS10970 IPR004685 Branched-chain amino acid transport system II carrier protein RK88_RS10975 IPR010164 Ornithine aminotransferase RK88_RS10975 IPR004636 Acetylornithine/Succinylornithine transaminase family RK88_RS10975 IPR034757 Ornithine aminotransferase, bacterial type RK88_RS10975 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS10975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS10975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS10975 IPR005814 Aminotransferase class-III RK88_RS10980 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site RK88_RS10980 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 RK88_RS10980 IPR000534 Semialdehyde dehydrogenase, NAD-binding RK88_RS10980 IPR012280 Semialdehyde dehydrogenase, dimerisation domain RK88_RS10980 IPR036291 NAD(P)-binding domain superfamily RK88_RS10985 IPR042195 ArgJ beta chain, C-terminal domain RK88_RS10985 IPR016117 ArgJ-like domain superfamily RK88_RS10985 IPR002813 Arginine biosynthesis protein ArgJ RK88_RS10990 IPR004662 Acetylglutamate kinase family RK88_RS10990 IPR036393 Acetylglutamate kinase-like superfamily RK88_RS10990 IPR001048 Aspartate/glutamate/uridylate kinase RK88_RS10990 IPR037528 Acetylglutamate kinase ArgB RK88_RS11005 IPR020806 Polyketide synthase, phosphopantetheine-binding domain RK88_RS11005 IPR000873 AMP-dependent synthetase/ligase RK88_RS11005 IPR010071 Amino acid adenylation domain RK88_RS11005 IPR029058 Alpha/Beta hydrolase fold RK88_RS11005 IPR036736 ACP-like superfamily RK88_RS11005 IPR025110 AMP-binding enzyme, C-terminal domain RK88_RS11005 IPR020845 AMP-binding, conserved site RK88_RS11005 IPR001031 Thioesterase RK88_RS11005 IPR042099 AMP-dependent synthetase-like superfamily RK88_RS11005 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily RK88_RS11005 IPR001242 Condensation domain RK88_RS11005 IPR010060 Non-ribosomal peptide synthase RK88_RS11005 IPR006162 Phosphopantetheine attachment site RK88_RS11005 IPR009081 Phosphopantetheine binding ACP domain RK88_RS11015 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK88_RS11015 IPR036291 NAD(P)-binding domain superfamily RK88_RS11015 IPR033689 NAD-dependent formate dehydrogenase RK88_RS11015 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RK88_RS11015 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RK88_RS11015 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK88_RS11020 IPR018745 Domain of unknown function DUF2294 RK88_RS11025 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal RK88_RS11025 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RK88_RS11025 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RK88_RS11025 IPR006089 Acyl-CoA dehydrogenase, conserved site RK88_RS11025 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RK88_RS11025 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RK88_RS11025 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RK88_RS11030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS11030 IPR005889 Nitrate transport permease RK88_RS11030 IPR035906 MetI-like superfamily RK88_RS11040 IPR003593 AAA+ ATPase domain RK88_RS11040 IPR003439 ABC transporter-like RK88_RS11040 IPR017871 ABC transporter, conserved site RK88_RS11040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11040 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB RK88_RS11055 IPR002524 Cation efflux protein RK88_RS11055 IPR027470 Cation efflux protein, cytoplasmic domain RK88_RS11055 IPR036837 Cation efflux protein, cytoplasmic domain superfamily RK88_RS11055 IPR027469 Cation efflux transmembrane domain superfamily RK88_RS11060 IPR016160 Aldehyde dehydrogenase, cysteine active site RK88_RS11060 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RK88_RS11060 IPR016162 Aldehyde dehydrogenase, N-terminal RK88_RS11060 IPR015590 Aldehyde dehydrogenase domain RK88_RS11060 IPR016163 Aldehyde dehydrogenase, C-terminal RK88_RS11060 IPR016161 Aldehyde/histidinol dehydrogenase RK88_RS11065 IPR007401 Protein of unknown function DUF454 RK88_RS11070 IPR023953 Heme oxygenase IsdG RK88_RS11070 IPR007138 Antibiotic biosynthesis monooxygenase domain RK88_RS11070 IPR011008 Dimeric alpha-beta barrel RK88_RS11075 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like RK88_RS11075 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain RK88_RS11080 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation RK88_RS11080 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase RK88_RS11080 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal RK88_RS11080 IPR036291 NAD(P)-binding domain superfamily RK88_RS11080 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RK88_RS11080 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal RK88_RS11080 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily RK88_RS11080 IPR017476 UDP-glucose/GDP-mannose dehydrogenase RK88_RS11090 IPR003362 Bacterial sugar transferase RK88_RS11105 IPR011004 Trimeric LpxA-like superfamily RK88_RS11105 IPR039369 Galactoside O-acetyltransferase LacA-like RK88_RS11105 IPR024688 Maltose/galactoside acetyltransferase RK88_RS11105 IPR001451 Hexapeptide repeat RK88_RS11120 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain RK88_RS11120 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like RK88_RS11120 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB RK88_RS11125 IPR001509 NAD-dependent epimerase/dehydratase RK88_RS11125 IPR036291 NAD(P)-binding domain superfamily RK88_RS11125 IPR014710 RmlC-like jelly roll fold RK88_RS11125 IPR011051 RmlC-like cupin domain superfamily RK88_RS11130 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RK88_RS11130 IPR036291 NAD(P)-binding domain superfamily RK88_RS11130 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain RK88_RS11135 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RK88_RS11135 IPR036291 NAD(P)-binding domain superfamily RK88_RS11135 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS11140 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC RK88_RS11140 IPR016195 Polymerase/histidinol phosphatase-like RK88_RS11145 IPR025669 AAA domain RK88_RS11145 IPR005702 Exopolysaccharide synthesis protein RK88_RS11145 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11150 IPR005701 Polysaccharide export protein MPA1-like RK88_RS11150 IPR003856 Polysaccharide chain length determinant N-terminal domain RK88_RS11155 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase RK88_RS11155 IPR015590 Aldehyde dehydrogenase domain RK88_RS11155 IPR016163 Aldehyde dehydrogenase, C-terminal RK88_RS11155 IPR016161 Aldehyde/histidinol dehydrogenase RK88_RS11155 IPR018211 Alcohol dehydrogenase, iron-type, conserved site RK88_RS11155 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA RK88_RS11155 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain RK88_RS11155 IPR016162 Aldehyde dehydrogenase, N-terminal RK88_RS11155 IPR039697 Iron-type alcohol dehydrogenase-like RK88_RS11170 IPR029052 Metallo-dependent phosphatase-like RK88_RS11170 IPR019931 LPXTG cell wall anchor domain RK88_RS11170 IPR041827 CpdB, N-terminal metallophosphatase domain RK88_RS11170 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RK88_RS11170 IPR006179 5'-Nucleotidase/apyrase RK88_RS11170 IPR036907 5'-Nucleotidase, C-terminal domain superfamily RK88_RS11170 IPR008334 5'-Nucleotidase, C-terminal RK88_RS11170 IPR006146 5'-Nucleotidase, conserved site RK88_RS11180 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein RK88_RS11185 IPR003439 ABC transporter-like RK88_RS11185 IPR012693 ABC transporter, phosphonate import, PhnC RK88_RS11185 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11185 IPR003593 AAA+ ATPase domain RK88_RS11185 IPR017871 ABC transporter, conserved site RK88_RS11190 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS11190 IPR035906 MetI-like superfamily RK88_RS11190 IPR005769 ABC transporter, permease PhnE/PtxC RK88_RS11195 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS11195 IPR035906 MetI-like superfamily RK88_RS11195 IPR005769 ABC transporter, permease PhnE/PtxC RK88_RS11200 IPR017850 Alkaline-phosphatase-like, core domain superfamily RK88_RS11200 IPR010045 Phosphopentomutase RK88_RS11200 IPR006124 Metalloenzyme RK88_RS11200 IPR024052 Phosphopentomutase DeoB cap domain superfamily RK88_RS11205 IPR002915 DeoC/FbaB/ lacD aldolase RK88_RS11205 IPR011343 Deoxyribose-phosphate aldolase RK88_RS11205 IPR013785 Aldolase-type TIM barrel RK88_RS11205 IPR028581 Deoxyribose-phosphate aldolase type I RK88_RS11210 IPR036259 MFS transporter superfamily RK88_RS11210 IPR020846 Major facilitator superfamily domain RK88_RS11210 IPR011701 Major facilitator superfamily RK88_RS11215 IPR018016 Nucleoside phosphorylase, conserved site RK88_RS11215 IPR035994 Nucleoside phosphorylase superfamily RK88_RS11215 IPR000845 Nucleoside phosphorylase domain RK88_RS11215 IPR004402 Purine nucleoside phosphorylase DeoD-type RK88_RS11225 IPR011663 UbiC transcription regulator-associated RK88_RS11225 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS11225 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily RK88_RS11225 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS11225 IPR000524 Transcription regulator HTH, GntR RK88_RS11225 IPR017722 Phosphonate utilization transcriptional regulator PhnR RK88_RS11235 IPR019833 Manganese/iron superoxide dismutase, binding site RK88_RS11235 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily RK88_RS11235 IPR001189 Manganese/iron superoxide dismutase RK88_RS11235 IPR019831 Manganese/iron superoxide dismutase, N-terminal RK88_RS11235 IPR019832 Manganese/iron superoxide dismutase, C-terminal RK88_RS11235 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily RK88_RS11250 IPR001296 Glycosyl transferase, family 1 RK88_RS11255 IPR003362 Bacterial sugar transferase RK88_RS11255 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase RK88_RS11260 IPR036291 NAD(P)-binding domain superfamily RK88_RS11260 IPR001509 NAD-dependent epimerase/dehydratase RK88_RS11270 IPR014007 Acetoin reductase RK88_RS11270 IPR036291 NAD(P)-binding domain superfamily RK88_RS11270 IPR002347 Short-chain dehydrogenase/reductase SDR RK88_RS11270 IPR020904 Short-chain dehydrogenase/reductase, conserved site RK88_RS11285 IPR036086 ParB/Sulfiredoxin superfamily RK88_RS11285 IPR037953 SbnI-like, N-terminal RK88_RS11285 IPR016999 L-serine kinase SbnI-like RK88_RS11285 IPR003115 ParB/Sulfiredoxin RK88_RS11290 IPR000183 Ornithine/DAP/Arg decarboxylase RK88_RS11290 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal RK88_RS11290 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal RK88_RS11290 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal RK88_RS11290 IPR022272 Lipocalin family conserved site RK88_RS11290 IPR029066 PLP-binding barrel RK88_RS11290 IPR002433 Ornithine decarboxylase RK88_RS11295 IPR005000 HpcH/HpaI aldolase/citrate lyase domain RK88_RS11295 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase RK88_RS11295 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RK88_RS11295 IPR040442 Pyruvate kinase-like domain superfamily RK88_RS11300 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like RK88_RS11300 IPR022770 Ferric iron reductase FhuF domain RK88_RS11300 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RK88_RS11305 IPR022770 Ferric iron reductase FhuF domain RK88_RS11305 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like RK88_RS11305 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RK88_RS11310 IPR036259 MFS transporter superfamily RK88_RS11310 IPR005828 Major facilitator, sugar transporter-like RK88_RS11310 IPR011701 Major facilitator superfamily RK88_RS11310 IPR020846 Major facilitator superfamily domain RK88_RS11310 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RK88_RS11315 IPR022770 Ferric iron reductase FhuF domain RK88_RS11315 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RK88_RS11315 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like RK88_RS11320 IPR007110 Immunoglobulin-like domain RK88_RS11320 IPR023866 2,3-diaminopropionate biosynthesis protein SbnB RK88_RS11320 IPR036291 NAD(P)-binding domain superfamily RK88_RS11320 IPR003462 Ornithine cyclodeaminase/mu-crystallin RK88_RS11320 IPR023401 Ornithine cyclodeaminase, N-terminal RK88_RS11325 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site RK88_RS11325 IPR001926 Pyridoxal-phosphate dependent enzyme RK88_RS11325 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA RK88_RS11325 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK88_RS11330 IPR002491 ABC transporter periplasmic binding domain RK88_RS11335 IPR000522 ABC transporter, permease protein, BtuC-like RK88_RS11335 IPR037294 ABC transporter, BtuC-like RK88_RS11340 IPR037294 ABC transporter, BtuC-like RK88_RS11340 IPR000522 ABC transporter, permease protein, BtuC-like RK88_RS11345 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS11345 IPR010166 Transcriptional regulator SarA/Rot RK88_RS11345 IPR000835 MarR-type HTH domain RK88_RS11345 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS11355 IPR019948 Gram-positive LPXTG cell wall anchor RK88_RS11355 IPR009063 Immunoglobulin/albumin-binding domain superfamily RK88_RS11355 IPR019931 LPXTG cell wall anchor domain RK88_RS11355 IPR018392 LysM domain RK88_RS11355 IPR036779 LysM domain superfamily RK88_RS11355 IPR005038 Octapeptide repeat RK88_RS11355 IPR005877 YSIRK Gram-positive signal peptide RK88_RS11355 IPR003132 Protein A, Ig-binding domain RK88_RS11360 IPR003804 L-lactate permease RK88_RS11370 IPR010354 Oleate hydratase RK88_RS11370 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS11375 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein RK88_RS11375 IPR003841 Sodium-dependent phosphate transport protein RK88_RS11380 IPR020846 Major facilitator superfamily domain RK88_RS11380 IPR011701 Major facilitator superfamily RK88_RS11380 IPR036259 MFS transporter superfamily RK88_RS11385 IPR011650 Peptidase M20, dimerisation domain RK88_RS11385 IPR036264 Bacterial exopeptidase dimerisation domain RK88_RS11385 IPR017439 Amidohydrolase RK88_RS11385 IPR002933 Peptidase M20 RK88_RS11390 IPR037923 Transcription regulator HTH-like RK88_RS11390 IPR009057 Homeobox-like domain superfamily RK88_RS11390 IPR020449 Transcription regulator HTH, AraC- type RK88_RS11390 IPR018060 DNA binding HTH domain, AraC-type RK88_RS11390 IPR017853 Glycoside hydrolase superfamily RK88_RS11395 IPR038641 Csa superfamily RK88_RS11395 IPR007595 Csa family RK88_RS11400 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain RK88_RS11400 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily RK88_RS11430 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal RK88_RS11430 IPR035587 DUS-like, FMN-binding domain RK88_RS11430 IPR018517 tRNA-dihydrouridine synthase, conserved site RK88_RS11430 IPR013785 Aldolase-type TIM barrel RK88_RS11430 IPR001269 tRNA-dihydrouridine synthase RK88_RS11435 IPR000182 GNAT domain RK88_RS11435 IPR016181 Acyl-CoA N-acyltransferase RK88_RS11445 IPR009057 Homeobox-like domain superfamily RK88_RS11445 IPR001647 DNA-binding HTH domain, TetR-type RK88_RS11460 IPR004638 Drug resistance transporter EmrB-like RK88_RS11460 IPR011701 Major facilitator superfamily RK88_RS11460 IPR020846 Major facilitator superfamily domain RK88_RS11460 IPR036259 MFS transporter superfamily RK88_RS11485 IPR019292 5-methylcytosine restriction system component RK88_RS11485 IPR014407 5-methylcytosine restriction system component, bacterial RK88_RS11490 IPR021961 Protein of unknown function DUF3578 RK88_RS11490 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11490 IPR011704 ATPase, dynein-related, AAA domain RK88_RS11490 IPR003593 AAA+ ATPase domain RK88_RS11500 IPR025246 Transposase IS30-like HTH domain RK88_RS11500 IPR012337 Ribonuclease H-like superfamily RK88_RS11500 IPR036397 Ribonuclease H superfamily RK88_RS11500 IPR001598 Transposase, IS30, conserved site RK88_RS11500 IPR001584 Integrase, catalytic core RK88_RS11515 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11515 IPR026866 Protein CR006, P-loop domain RK88_RS11520 IPR029028 Alpha/beta knot methyltransferases RK88_RS11520 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK88_RS11520 IPR003742 RNA methyltransferase RlmH RK88_RS11525 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type RK88_RS11525 IPR006179 5'-Nucleotidase/apyrase RK88_RS11525 IPR008334 5'-Nucleotidase, C-terminal RK88_RS11525 IPR006146 5'-Nucleotidase, conserved site RK88_RS11525 IPR036907 5'-Nucleotidase, C-terminal domain superfamily RK88_RS11525 IPR029052 Metallo-dependent phosphatase-like RK88_RS11530 IPR001279 Metallo-beta-lactamase RK88_RS11530 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RK88_RS11540 IPR042274 Regulatory protein YycH/YycI , domain 2 RK88_RS11540 IPR009996 Regulatory protein YycH RK88_RS11545 IPR003660 HAMP domain RK88_RS11545 IPR000014 PAS domain RK88_RS11545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RK88_RS11545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RK88_RS11545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RK88_RS11545 IPR005467 Histidine kinase domain RK88_RS11545 IPR000700 PAS-associated, C-terminal RK88_RS11545 IPR035965 PAS domain superfamily RK88_RS11545 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS11545 IPR029151 Periplasmic sensor-like domain superfamily RK88_RS11545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS11550 IPR001867 OmpR/PhoB-type DNA-binding domain RK88_RS11550 IPR011006 CheY-like superfamily RK88_RS11550 IPR016032 Signal transduction response regulator, C-terminal effector RK88_RS11550 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS11550 IPR039420 Transcriptional regulatory protein WalR-like RK88_RS11550 IPR001789 Signal transduction response regulator, receiver domain RK88_RS11565 IPR018220 Adenylosuccinate synthase, GTP-binding site RK88_RS11565 IPR033128 Adenylosuccinate synthase, active site RK88_RS11565 IPR042109 Adenylosuccinate synthetase, domain 1 RK88_RS11565 IPR042111 Adenylosuccinate synthetase, domain 3 RK88_RS11565 IPR001114 Adenylosuccinate synthetase RK88_RS11565 IPR042110 Adenylosuccinate synthetase, domain 2 RK88_RS11565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11575 IPR007694 DNA helicase, DnaB-like, C-terminal RK88_RS11575 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11575 IPR007693 DNA helicase, DnaB-like, N-terminal RK88_RS11575 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RK88_RS11575 IPR003593 AAA+ ATPase domain RK88_RS11575 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily RK88_RS11575 IPR007692 DNA helicase, DnaB type RK88_RS11580 IPR000244 Ribosomal protein L9 RK88_RS11580 IPR036791 Ribosomal protein L9, C-terminal domain superfamily RK88_RS11580 IPR020070 Ribosomal protein L9, N-terminal RK88_RS11580 IPR036935 Ribosomal protein L9, N-terminal domain superfamily RK88_RS11580 IPR020069 Ribosomal protein L9, C-terminal RK88_RS11580 IPR020594 Ribosomal protein L9, bacteria/chloroplast RK88_RS11580 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RK88_RS11585 IPR000160 GGDEF domain RK88_RS11585 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA RK88_RS11585 IPR003156 DHHA1 domain RK88_RS11585 IPR038763 DHH phosphoesterase superfamily RK88_RS11585 IPR001667 DDH domain RK88_RS11595 IPR029058 Alpha/Beta hydrolase fold RK88_RS11595 IPR000073 Alpha/beta hydrolase fold-1 RK88_RS11595 IPR008220 Homoserine/serine acetyltransferase MetX-like RK88_RS11610 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) RK88_RS11610 IPR002317 Serine-tRNA ligase, type1 RK88_RS11610 IPR015866 Serine-tRNA synthetase, type1, N-terminal RK88_RS11610 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily RK88_RS11610 IPR006195 Aminoacyl-tRNA synthetase, class II RK88_RS11610 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RK88_RS11610 IPR033729 Serine-tRNA ligase catalytic core domain RK88_RS11620 IPR001106 Aromatic amino acid lyase RK88_RS11620 IPR008948 L-Aspartase-like RK88_RS11620 IPR005921 Histidine ammonia-lyase RK88_RS11620 IPR024083 Fumarase/histidase, N-terminal RK88_RS11620 IPR022313 Phenylalanine/histidine ammonia-lyases, active site RK88_RS11625 IPR017953 Carbohydrate kinase, predicted, conserved site RK88_RS11625 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase RK88_RS11625 IPR029056 Ribokinase-like RK88_RS11630 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily RK88_RS11630 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta RK88_RS11630 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RK88_RS11630 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal RK88_RS11630 IPR005743 DNA gyrase, subunit A RK88_RS11630 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RK88_RS11630 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat RK88_RS11635 IPR018522 DNA topoisomerase, type IIA, conserved site RK88_RS11635 IPR001241 DNA topoisomerase, type IIA RK88_RS11635 IPR013760 DNA topoisomerase, type IIA-like domain superfamily RK88_RS11635 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal RK88_RS11635 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS11635 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 RK88_RS11635 IPR011557 DNA gyrase, subunit B RK88_RS11635 IPR006171 TOPRIM domain RK88_RS11635 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS11635 IPR002288 DNA gyrase B subunit, C-terminal RK88_RS11635 IPR034160 DNA gyrase subunit B, TOPRIM domain RK88_RS11635 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS11635 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS11640 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11640 IPR001238 DNA-binding, RecF RK88_RS11640 IPR042174 DNA-binding RecF, domain 2 RK88_RS11640 IPR018078 DNA-binding, RecF, conserved site RK88_RS11640 IPR003395 RecF/RecN/SMC, N-terminal RK88_RS11645 IPR002942 RNA-binding S4 domain RK88_RS11645 IPR036986 RNA-binding S4 domain superfamily RK88_RS11645 IPR014330 RNA-binding S4-related,YaaA RK88_RS11650 IPR022637 DNA polymerase III, beta sliding clamp, central RK88_RS11650 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal RK88_RS11650 IPR001001 DNA polymerase III, beta sliding clamp RK88_RS11650 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal RK88_RS11655 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11655 IPR010921 Trp repressor/replication initiator RK88_RS11655 IPR013317 Chromosomal replication initiator protein DnaA RK88_RS11655 IPR003593 AAA+ ATPase domain RK88_RS11655 IPR001957 Chromosomal replication control, initiator DnaA RK88_RS11655 IPR020591 Chromosomal replication control, initiator DnaA-like RK88_RS11655 IPR018312 Chromosomal replication control, initiator DnaA, conserved site RK88_RS11655 IPR013159 Chromosomal replication initiator, DnaA C-terminal RK88_RS11655 IPR024633 DnaA N-terminal domain RK88_RS11655 IPR038454 DnaA, N-terminal domain superfamily RK88_RS11660 IPR020939 Ribosomal protein L34, conserved site RK88_RS11660 IPR000271 Ribosomal protein L34 RK88_RS11665 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS11665 IPR020539 Ribonuclease P, conserved site RK88_RS11665 IPR000100 Ribonuclease P RK88_RS11665 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS11670 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 RK88_RS11670 IPR025867 MnmE, helical domain RK88_RS11670 IPR004520 tRNA modification GTPase MnmE RK88_RS11670 IPR005225 Small GTP-binding protein domain RK88_RS11670 IPR027368 tRNA modification GTPase MnmE domain 2 RK88_RS11670 IPR031168 TrmE-type guanine nucleotide-binding domain RK88_RS11670 IPR018948 GTP-binding protein TrmE, N-terminal RK88_RS11670 IPR006073 GTP binding domain RK88_RS11670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11675 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related RK88_RS11675 IPR026904 GidA associated domain 3 RK88_RS11675 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS11675 IPR020595 MnmG-related, conserved site RK88_RS11675 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG RK88_RS11680 IPR003682 rRNA small subunit methyltransferase G RK88_RS11680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS11685 IPR036086 ParB/Sulfiredoxin superfamily RK88_RS11685 IPR004437 ParB/RepB/Spo0J partition protein RK88_RS11685 IPR003115 ParB/Sulfiredoxin RK88_RS11685 IPR041468 ParB/Spo0J, HTH domain RK88_RS11685 IPR023705 Nucleoid occlusion protein RK88_RS11705 IPR002059 Cold-shock protein, DNA-binding RK88_RS11705 IPR012156 Cold shock, CspA RK88_RS11705 IPR011129 Cold shock domain RK88_RS11705 IPR019844 Cold-shock (CSD) domain RK88_RS11705 IPR012340 Nucleic acid-binding, OB-fold RK88_RS11710 IPR015500 Peptidase S8, subtilisin-related RK88_RS11710 IPR023827 Peptidase S8, subtilisin, Asp-active site RK88_RS11710 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily RK88_RS11710 IPR034202 Subtilisin Carlsberg-like catalytic domain RK88_RS11710 IPR023828 Peptidase S8, subtilisin, Ser-active site RK88_RS11710 IPR000209 Peptidase S8/S53 domain RK88_RS11710 IPR036852 Peptidase S8/S53 domain superfamily RK88_RS11710 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 RK88_RS11710 IPR022398 Peptidase S8, subtilisin, His-active site RK88_RS11735 IPR003838 ABC transporter permease protein domain RK88_RS11735 IPR027022 ABC transporter permease protein, BceB-type RK88_RS11740 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11740 IPR003439 ABC transporter-like RK88_RS11740 IPR003593 AAA+ ATPase domain RK88_RS11750 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS11750 IPR001447 Arylamine N-acetyltransferase RK88_RS11755 IPR004688 Transition metal uptake transporter nickel/cobalt RK88_RS11755 IPR011541 Nickel/cobalt transporter, high-affinity RK88_RS11765 IPR004626 RarD protein RK88_RS11765 IPR000620 EamA domain RK88_RS11770 IPR030676 Citrate carrier CitT-related RK88_RS11770 IPR001898 Solute carrier family 13 RK88_RS11775 IPR008454 Collagen-binding surface protein Cna-like, B-type domain RK88_RS11775 IPR011252 Fibrogen-binding domain 1 RK88_RS11775 IPR019931 LPXTG cell wall anchor domain RK88_RS11775 IPR008456 Collagen binding domain RK88_RS11775 IPR013783 Immunoglobulin-like fold RK88_RS11775 IPR041033 Prealbumin-like fold domain RK88_RS11775 IPR008966 Adhesion domain superfamily RK88_RS11785 IPR033694 Pyroglutamyl peptidase I, Cys active site RK88_RS11785 IPR029762 Pyroglutamyl peptidase I, bacterial-type RK88_RS11785 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily RK88_RS11785 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RK88_RS11785 IPR033693 Pyroglutamyl peptidase I, Glu active site RK88_RS11785 IPR000816 Peptidase C15, pyroglutamyl peptidase I RK88_RS11795 IPR011042 Six-bladed beta-propeller, TolB-like RK88_RS11795 IPR013658 SMP-30/Gluconolactonase/LRE-like region RK88_RS11800 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily RK88_RS11800 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RK88_RS11810 IPR022914 Protein of unknown function UPF0397 RK88_RS11810 IPR009825 ECF transporter, substrate-specific component-like RK88_RS11815 IPR017871 ABC transporter, conserved site RK88_RS11815 IPR003439 ABC transporter-like RK88_RS11815 IPR022216 Putative ABC cobalt transporter RK88_RS11815 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11815 IPR003593 AAA+ ATPase domain RK88_RS11835 IPR004517 ATP phosphoribosyltransferase regulatory subunit RK88_RS11835 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain RK88_RS11840 IPR013820 ATP phosphoribosyltransferase, catalytic domain RK88_RS11840 IPR001348 ATP phosphoribosyltransferase HisG RK88_RS11840 IPR024893 ATP phosphoribosyltransferase HisG, short form RK88_RS11845 IPR012131 Histidinol dehydrogenase RK88_RS11845 IPR016161 Aldehyde/histidinol dehydrogenase RK88_RS11845 IPR001692 Histidinol dehydrogenase, conserved site RK88_RS11845 IPR022695 Histidinol dehydrogenase, monofunctional RK88_RS11850 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS11850 IPR005861 Histidinol-phosphate aminotransferase family RK88_RS11850 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS11850 IPR004839 Aminotransferase, class I/classII RK88_RS11850 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS11855 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily RK88_RS11855 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS11855 IPR000807 Imidazoleglycerol-phosphate dehydratase RK88_RS11855 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site RK88_RS11860 IPR029062 Class I glutamine amidotransferase-like RK88_RS11860 IPR017926 Glutamine amidotransferase RK88_RS11860 IPR010139 Imidazole glycerol phosphate synthase, subunit H RK88_RS11865 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase RK88_RS11865 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA RK88_RS11865 IPR013785 Aldolase-type TIM barrel RK88_RS11865 IPR006062 Histidine biosynthesis RK88_RS11865 IPR011060 Ribulose-phosphate binding barrel RK88_RS11870 IPR013785 Aldolase-type TIM barrel RK88_RS11870 IPR006062 Histidine biosynthesis RK88_RS11870 IPR004651 Histidine biosynthesis, HisF RK88_RS11870 IPR011060 Ribulose-phosphate binding barrel RK88_RS11875 IPR026660 Phosphoribosyl-AMP cyclohydrolase RK88_RS11875 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain RK88_RS11875 IPR023019 Histidine biosynthesis bifunctional protein HisIE RK88_RS11875 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase RK88_RS11875 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like RK88_RS11875 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily RK88_RS11880 IPR029058 Alpha/Beta hydrolase fold RK88_RS11880 IPR005877 YSIRK Gram-positive signal peptide RK88_RS11890 IPR002656 Acyltransferase 3 RK88_RS11895 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel RK88_RS11895 IPR002509 NodB homology domain RK88_RS11895 IPR023872 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase RK88_RS11900 IPR020510 Poly-beta-1,6-N-acetyl-D-glucosamine synthesis protein IcaD RK88_RS11905 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA RK88_RS11905 IPR029044 Nucleotide-diphospho-sugar transferases RK88_RS11905 IPR001173 Glycosyltransferase 2-like RK88_RS11910 IPR009057 Homeobox-like domain superfamily RK88_RS11910 IPR001647 DNA-binding HTH domain, TetR-type RK88_RS11910 IPR041646 IcaR, C-terminal RK88_RS11920 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS11920 IPR025669 AAA domain RK88_RS11920 IPR005702 Exopolysaccharide synthesis protein RK88_RS11925 IPR016195 Polymerase/histidinol phosphatase-like RK88_RS11925 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC RK88_RS11935 IPR028427 Peptide methionine sulfoxide reductase RK88_RS11935 IPR002569 Peptide methionine sulphoxide reductase MsrA RK88_RS11935 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily RK88_RS11935 IPR002579 Peptide methionine sulphoxide reductase MrsB RK88_RS11935 IPR011057 Mss4-like superfamily RK88_RS11940 IPR002563 Flavin reductase like domain RK88_RS11940 IPR012349 FMN-binding split barrel RK88_RS11965 IPR012349 FMN-binding split barrel RK88_RS11965 IPR002563 Flavin reductase like domain RK88_RS11970 IPR015919 Cadherin-like superfamily RK88_RS11970 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily RK88_RS11970 IPR019948 Gram-positive LPXTG cell wall anchor RK88_RS11970 IPR019931 LPXTG cell wall anchor domain RK88_RS11970 IPR022263 KxYKxGKxW signal peptide RK88_RS11970 IPR013783 Immunoglobulin-like fold RK88_RS11975 IPR014269 Accessory Sec system protein translocase subunit SecY2 RK88_RS11975 IPR002208 SecY/SEC61-alpha family RK88_RS11975 IPR023201 SecY domain superfamily RK88_RS11980 IPR022372 Accessory secretory system protein Asp1 RK88_RS11985 IPR022372 Accessory secretory system protein Asp1 RK88_RS11990 IPR029058 Alpha/Beta hydrolase fold RK88_RS11990 IPR022267 Accessory Sec system protein Asp2 RK88_RS11995 IPR022259 Accessory Sec system protein Asp3 RK88_RS12000 IPR036670 SecA, preprotein cross-linking domain superfamily RK88_RS12000 IPR036266 SecA, Wing/Scaffold superfamily RK88_RS12000 IPR011116 SecA Wing/Scaffold RK88_RS12000 IPR011130 SecA, preprotein cross-linking domain RK88_RS12000 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS12000 IPR014018 SecA motor DEAD RK88_RS12000 IPR011115 SecA DEAD-like, N-terminal RK88_RS12000 IPR022490 Protein translocase subunit SecA2 RK88_RS12000 IPR000185 Protein translocase subunit SecA RK88_RS12005 IPR014267 Glycosyltransferase Gtf1 RK88_RS12005 IPR001296 Glycosyl transferase, family 1 RK88_RS12010 IPR014268 Glycosyltransferase-stabilising protein Gtf2 RK88_RS12015 IPR002988 Protein G-related albumin-binding (GA) module RK88_RS12020 IPR016291 Isochorismatase RK88_RS12020 IPR009081 Phosphopantetheine binding ACP domain RK88_RS12020 IPR036380 Isochorismatase-like superfamily RK88_RS12020 IPR000868 Isochorismatase-like RK88_RS12020 IPR036736 ACP-like superfamily RK88_RS12025 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS12025 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain RK88_RS12025 IPR007921 CHAP domain RK88_RS12030 IPR013525 ABC-2 type transporter RK88_RS12030 IPR017501 Phage infection protein, YhgE, C-terminal RK88_RS12030 IPR017500 Phage infection protein, YhgE, N-terminal RK88_RS12035 IPR001250 Mannose-6-phosphate isomerase, type I RK88_RS12035 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form RK88_RS12035 IPR014710 RmlC-like jelly roll fold RK88_RS12035 IPR011051 RmlC-like cupin domain superfamily RK88_RS12040 IPR006327 Phosphotransferase system, fructose IIC component RK88_RS12040 IPR002178 PTS EIIA type-2 domain RK88_RS12040 IPR013011 Phosphotransferase system, EIIB component, type 2 RK88_RS12040 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RK88_RS12040 IPR036095 PTS system IIB component-like superfamily RK88_RS12040 IPR016152 Phosphotransferase/anion transporter RK88_RS12040 IPR003353 Phosphotransferase system, fructose-specific IIB subunit RK88_RS12040 IPR004715 Phosphotransferase system, IIA component fructose subfamily RK88_RS12040 IPR013014 Phosphotransferase system, EIIC component, type 2 RK88_RS12040 IPR003352 Phosphotransferase system, EIIC RK88_RS12045 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS12045 IPR013011 Phosphotransferase system, EIIB component, type 2 RK88_RS12045 IPR036095 PTS system IIB component-like superfamily RK88_RS12045 IPR013196 Helix-turn-helix, type 11 RK88_RS12045 IPR007737 Mga helix-turn-helix domain RK88_RS12045 IPR016152 Phosphotransferase/anion transporter RK88_RS12045 IPR036634 PRD domain superfamily RK88_RS12045 IPR011608 PRD domain RK88_RS12045 IPR002178 PTS EIIA type-2 domain RK88_RS12060 IPR025711 PepSY domain RK88_RS12060 IPR011096 FTP domain RK88_RS12060 IPR023612 Peptidase M4 RK88_RS12060 IPR027268 Peptidase M4/M1, CTD superfamily RK88_RS12060 IPR013856 Peptidase M4 domain RK88_RS12060 IPR001570 Peptidase M4, C-terminal RK88_RS12065 IPR036251 Arginine repressor, C-terminal domain superfamily RK88_RS12065 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS12065 IPR020899 Arginine repressor, C-terminal RK88_RS12065 IPR020900 Arginine repressor, DNA-binding domain RK88_RS12065 IPR001669 Arginine repressor RK88_RS12065 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS12075 IPR003876 Arginine deiminase RK88_RS12080 IPR002292 Ornithine/putrescine carbamoyltransferase RK88_RS12080 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding RK88_RS12080 IPR006130 Aspartate/ornithine carbamoyltransferase RK88_RS12080 IPR024904 Ornithine carbamoyltransferase RK88_RS12080 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily RK88_RS12080 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain RK88_RS12085 IPR022461 Arginine/ornithine antiporter RK88_RS12085 IPR002293 Amino acid/polyamine transporter I RK88_RS12085 IPR004754 Amino acid antiporter RK88_RS12090 IPR001048 Aspartate/glutamate/uridylate kinase RK88_RS12090 IPR003964 Carbamate kinase RK88_RS12090 IPR036393 Acetylglutamate kinase-like superfamily RK88_RS12095 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS12095 IPR012318 Crp-type HTH domain RK88_RS12095 IPR018490 Cyclic nucleotide-binding-like RK88_RS12095 IPR000595 Cyclic nucleotide-binding domain RK88_RS12100 IPR005877 YSIRK Gram-positive signal peptide RK88_RS12100 IPR041171 SDR-like Ig domain RK88_RS12100 IPR019931 LPXTG cell wall anchor domain RK88_RS12100 IPR019948 Gram-positive LPXTG cell wall anchor RK88_RS12100 IPR011252 Fibrogen-binding domain 1 RK88_RS12100 IPR008966 Adhesion domain superfamily RK88_RS12100 IPR011266 Fibrinogen-binding domain 2 RK88_RS12110 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS12110 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS12110 IPR023187 Transcriptional regulator MarR-type, conserved site RK88_RS12110 IPR000835 MarR-type HTH domain RK88_RS12120 IPR018299 Alkaline phosphatase, active site RK88_RS12120 IPR017850 Alkaline-phosphatase-like, core domain superfamily RK88_RS12120 IPR001952 Alkaline phosphatase RK88_RS12130 IPR039420 Transcriptional regulatory protein WalR-like RK88_RS12130 IPR001789 Signal transduction response regulator, receiver domain RK88_RS12130 IPR016032 Signal transduction response regulator, C-terminal effector RK88_RS12130 IPR001867 OmpR/PhoB-type DNA-binding domain RK88_RS12130 IPR011006 CheY-like superfamily RK88_RS12130 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS12135 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RK88_RS12135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RK88_RS12135 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS12135 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS12135 IPR005467 Histidine kinase domain RK88_RS12140 IPR017871 ABC transporter, conserved site RK88_RS12140 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS12140 IPR003593 AAA+ ATPase domain RK88_RS12140 IPR003439 ABC transporter-like RK88_RS12165 IPR036249 Thioredoxin-like superfamily RK88_RS12165 IPR000889 Glutathione peroxidase RK88_RS12175 IPR001094 Flavodoxin-like RK88_RS12175 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RK88_RS12175 IPR029039 Flavoprotein-like superfamily RK88_RS12175 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase RK88_RS12175 IPR017927 FAD-binding domain, ferredoxin reductase-type RK88_RS12175 IPR017938 Riboflavin synthase-like beta-barrel RK88_RS12175 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain RK88_RS12175 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily RK88_RS12175 IPR001433 Oxidoreductase FAD/NAD(P)-binding RK88_RS12175 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding RK88_RS12175 IPR008254 Flavodoxin/nitric oxide synthase RK88_RS12180 IPR028281 Siroheme synthase, central domain RK88_RS12180 IPR006367 Sirohaem synthase, N-terminal RK88_RS12180 IPR036291 NAD(P)-binding domain superfamily RK88_RS12180 IPR028161 Siroheme biosynthesis protein Met8 RK88_RS12190 IPR004680 Citrate transporter-like domain RK88_RS12190 IPR014738 Citrate transporter RK88_RS12195 IPR005144 ATP-cone domain RK88_RS12195 IPR001150 Glycine radical domain RK88_RS12195 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic RK88_RS12195 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RK88_RS12200 IPR013785 Aldolase-type TIM barrel RK88_RS12200 IPR034457 Organic radical-activating enzymes RK88_RS12200 IPR001989 Radical-activating enzyme, conserved site RK88_RS12200 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic RK88_RS12215 IPR000060 BCCT transporter family RK88_RS12215 IPR018093 BCCT transporter, conserved site RK88_RS12220 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS12220 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS12220 IPR026282 DNA-binding protein, MJ1563 type RK88_RS12230 IPR016161 Aldehyde/histidinol dehydrogenase RK88_RS12230 IPR016163 Aldehyde dehydrogenase, C-terminal RK88_RS12230 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RK88_RS12230 IPR016162 Aldehyde dehydrogenase, N-terminal RK88_RS12230 IPR011264 Betaine aldehyde dehydrogenase RK88_RS12230 IPR015590 Aldehyde dehydrogenase domain RK88_RS12230 IPR016160 Aldehyde dehydrogenase, cysteine active site RK88_RS12235 IPR011533 Oxygen-dependent choline dehydrogenase RK88_RS12235 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS12235 IPR012132 Glucose-methanol-choline oxidoreductase RK88_RS12235 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal RK88_RS12235 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal RK88_RS12235 IPR027424 Glucose Oxidase, domain 2 RK88_RS12250 IPR000873 AMP-dependent synthetase/ligase RK88_RS12250 IPR020845 AMP-binding, conserved site RK88_RS12250 IPR025110 AMP-binding enzyme, C-terminal domain RK88_RS12250 IPR042099 AMP-dependent synthetase-like superfamily RK88_RS12260 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS12260 IPR006231 Malate:quinone-oxidoreductase RK88_RS12265 IPR013785 Aldolase-type TIM barrel RK88_RS12265 IPR000741 Fructose-bisphosphate aldolase, class-I RK88_RS12265 IPR023014 Fructose-bisphosphate aldolase class I, Gram positive bacteria-type RK88_RS12275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS12275 IPR005814 Aminotransferase class-III RK88_RS12275 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS12275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS12280 IPR004758 Amino acid transporter RK88_RS12280 IPR002293 Amino acid/polyamine transporter I RK88_RS12290 IPR036291 NAD(P)-binding domain superfamily RK88_RS12290 IPR022383 Lactate/malate dehydrogenase, C-terminal RK88_RS12290 IPR018177 L-lactate dehydrogenase, active site RK88_RS12290 IPR001236 Lactate/malate dehydrogenase, N-terminal RK88_RS12290 IPR001557 L-lactate/malate dehydrogenase RK88_RS12290 IPR011304 L-lactate dehydrogenase RK88_RS12290 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal RK88_RS12295 IPR005128 Alpha-acetolactate decarboxylase RK88_RS12305 IPR003700 Ketopantoate hydroxymethyltransferase RK88_RS12305 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily RK88_RS12305 IPR040442 Pyruvate kinase-like domain superfamily RK88_RS12310 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain RK88_RS12310 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK88_RS12310 IPR003721 Pantoate-beta-alanine ligase RK88_RS12315 IPR009010 Aspartate decarboxylase-like domain superfamily RK88_RS12315 IPR003190 Aspartate decarboxylase RK88_RS12340 IPR003828 Epoxyqueuosine reductase QueH RK88_RS12350 IPR013785 Aldolase-type TIM barrel RK88_RS12350 IPR005719 Dihydroorotate dehydrogenase, class 2 RK88_RS12350 IPR001295 Dihydroorotate dehydrogenase, conserved site RK88_RS12350 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 RK88_RS12350 IPR005720 Dihydroorotate dehydrogenase domain RK88_RS12355 IPR016477 Fructosamine/Ketosamine-3-kinase RK88_RS12355 IPR011009 Protein kinase-like domain superfamily RK88_RS12375 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS12385 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS12385 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RK88_RS12385 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK88_RS12390 IPR029058 Alpha/Beta hydrolase fold RK88_RS12390 IPR000073 Alpha/beta hydrolase fold-1 RK88_RS12400 IPR020904 Short-chain dehydrogenase/reductase, conserved site RK88_RS12400 IPR002347 Short-chain dehydrogenase/reductase SDR RK88_RS12400 IPR036291 NAD(P)-binding domain superfamily RK88_RS12405 IPR009057 Homeobox-like domain superfamily RK88_RS12405 IPR001647 DNA-binding HTH domain, TetR-type RK88_RS12405 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RK88_RS12425 IPR009242 Protein of unknown function DUF896 RK88_RS12450 IPR023346 Lysozyme-like domain superfamily RK88_RS12450 IPR008258 Transglycosylase SLT domain 1 RK88_RS12455 IPR036514 SGNH hydrolase superfamily RK88_RS12455 IPR002656 Acyltransferase 3 RK88_RS12460 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS12460 IPR007921 CHAP domain RK88_RS12470 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS12470 IPR014105 Carotenoid/retinoid oxidoreductase RK88_RS12470 IPR002937 Amine oxidase RK88_RS12475 IPR029044 Nucleotide-diphospho-sugar transferases RK88_RS12475 IPR001173 Glycosyltransferase 2-like RK88_RS12480 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head RK88_RS12480 IPR019845 Squalene/phytoene synthase, conserved site RK88_RS12480 IPR002060 Squalene/phytoene synthase RK88_RS12480 IPR008949 Isoprenoid synthase domain superfamily RK88_RS12485 IPR014105 Carotenoid/retinoid oxidoreductase RK88_RS12485 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS12485 IPR002937 Amine oxidase RK88_RS12490 IPR004839 Aminotransferase, class I/classII RK88_RS12490 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS12490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS12490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS12495 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RK88_RS12495 IPR036291 NAD(P)-binding domain superfamily RK88_RS12495 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK88_RS12495 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK88_RS12495 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RK88_RS12500 IPR006122 Heavy metal-associated domain, copper ion-binding RK88_RS12500 IPR006121 Heavy metal-associated domain, HMA RK88_RS12500 IPR036163 Heavy metal-associated domain superfamily RK88_RS12500 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ RK88_RS12500 IPR017969 Heavy-metal-associated, conserved site RK88_RS12505 IPR017969 Heavy-metal-associated, conserved site RK88_RS12505 IPR027256 P-type ATPase, subfamily IB RK88_RS12505 IPR006121 Heavy metal-associated domain, HMA RK88_RS12505 IPR006122 Heavy metal-associated domain, copper ion-binding RK88_RS12505 IPR023299 P-type ATPase, cytoplasmic domain N RK88_RS12505 IPR023214 HAD superfamily RK88_RS12505 IPR036163 Heavy metal-associated domain superfamily RK88_RS12505 IPR008250 P-type ATPase, A domain superfamily RK88_RS12505 IPR023298 P-type ATPase, transmembrane domain superfamily RK88_RS12505 IPR018303 P-type ATPase, phosphorylation site RK88_RS12505 IPR001757 P-type ATPase RK88_RS12505 IPR036412 HAD-like superfamily RK88_RS12515 IPR011004 Trimeric LpxA-like superfamily RK88_RS12515 IPR024688 Maltose/galactoside acetyltransferase RK88_RS12515 IPR039369 Galactoside O-acetyltransferase LacA-like RK88_RS12515 IPR001451 Hexapeptide repeat RK88_RS12520 IPR016160 Aldehyde dehydrogenase, cysteine active site RK88_RS12520 IPR016163 Aldehyde dehydrogenase, C-terminal RK88_RS12520 IPR016161 Aldehyde/histidinol dehydrogenase RK88_RS12520 IPR029510 Aldehyde dehydrogenase, glutamic acid active site RK88_RS12520 IPR005932 1-pyrroline-5-carboxylate dehydrogenase RK88_RS12520 IPR016162 Aldehyde dehydrogenase, N-terminal RK88_RS12520 IPR015590 Aldehyde dehydrogenase domain RK88_RS12535 IPR004869 Membrane transport protein MMPL domain RK88_RS12535 IPR000731 Sterol-sensing domain RK88_RS12545 IPR003373 Ferrous iron transport protein B RK88_RS12545 IPR011640 Ferrous iron transport protein B, C-terminal RK88_RS12545 IPR041069 FeoB, cytosolic helical domain RK88_RS12545 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS12545 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain RK88_RS12545 IPR030389 FeoB-type guanine nucleotide-binding (G) domain RK88_RS12555 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS12555 IPR003593 AAA+ ATPase domain RK88_RS12555 IPR019489 Clp ATPase, C-terminal RK88_RS12555 IPR001270 ClpA/B family RK88_RS12555 IPR041546 ClpA/ClpB, AAA lid domain RK88_RS12555 IPR003959 ATPase, AAA-type, core RK88_RS12560 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain RK88_RS12560 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily RK88_RS12560 IPR023546 Methylated-DNA--protein-cysteine methyltransferase RK88_RS12560 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain RK88_RS12560 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding RK88_RS12560 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site RK88_RS12560 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS12565 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal RK88_RS12565 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic RK88_RS12565 IPR016039 Thiolase-like RK88_RS12565 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain RK88_RS12570 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II RK88_RS12570 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type RK88_RS12570 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily RK88_RS12570 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily RK88_RS12570 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site RK88_RS12570 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily RK88_RS12575 IPR007921 CHAP domain RK88_RS12575 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS12585 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS12585 IPR005119 LysR, substrate-binding RK88_RS12585 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS12585 IPR000847 Transcription regulator HTH, LysR RK88_RS12590 IPR005538 LrgA/CidA family RK88_RS12590 IPR023760 Holin-like protein CidA RK88_RS12595 IPR007300 CidB/LrgB family RK88_RS12600 IPR029035 DHS-like NAD/FAD-binding domain superfamily RK88_RS12600 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RK88_RS12600 IPR029061 Thiamin diphosphate-binding fold RK88_RS12600 IPR000399 TPP-binding enzyme, conserved site RK88_RS12600 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RK88_RS12600 IPR012000 Thiamine pyrophosphate enzyme, central domain RK88_RS12605 IPR011055 Duplicated hybrid motif RK88_RS12605 IPR036878 Glucose permease domain IIB RK88_RS12605 IPR003352 Phosphotransferase system, EIIC RK88_RS12605 IPR001996 Phosphotransferase system, IIB component, type 1 RK88_RS12605 IPR011299 PTS system glucose-specific IIBC component RK88_RS12605 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RK88_RS12605 IPR013013 Phosphotransferase system, EIIC component, type 1 RK88_RS12605 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 RK88_RS12620 IPR000084 PE-PGRS family, N-terminal RK88_RS12620 IPR029058 Alpha/Beta hydrolase fold RK88_RS12620 IPR013094 Alpha/beta hydrolase fold-3 RK88_RS12625 IPR000620 EamA domain RK88_RS12640 IPR029009 Allosteric substrate binding domain superfamily RK88_RS12640 IPR002912 ACT domain RK88_RS12640 IPR005131 Serine dehydratase beta chain RK88_RS12640 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit RK88_RS12645 IPR004642 Serine dehydratase, alpha subunit RK88_RS12645 IPR005130 Serine dehydratase-like, alpha subunit RK88_RS12660 IPR000182 GNAT domain RK88_RS12660 IPR016181 Acyl-CoA N-acyltransferase RK88_RS12665 IPR005754 Sortase family RK88_RS12665 IPR023365 Sortase domain superfamily RK88_RS12665 IPR042007 Sortase A RK88_RS12670 IPR006379 HAD-superfamily hydrolase, subfamily IIB RK88_RS12670 IPR023938 HMP-PP phosphatase RK88_RS12670 IPR036412 HAD-like superfamily RK88_RS12670 IPR000150 Cof family RK88_RS12670 IPR023214 HAD superfamily RK88_RS12680 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK88_RS12680 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RK88_RS12680 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RK88_RS12680 IPR036291 NAD(P)-binding domain superfamily RK88_RS12680 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK88_RS12685 IPR029479 Nitroreductase RK88_RS12685 IPR033878 Nitroreductase NfsB-like RK88_RS12685 IPR000415 Nitroreductase-like RK88_RS12690 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II RK88_RS12690 IPR037523 Vicinal oxygen chelate (VOC) domain RK88_RS12690 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK88_RS12690 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK88_RS12700 IPR023187 Transcriptional regulator MarR-type, conserved site RK88_RS12700 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS12700 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS12700 IPR000835 MarR-type HTH domain RK88_RS12705 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK88_RS12705 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK88_RS12705 IPR037523 Vicinal oxygen chelate (VOC) domain RK88_RS12710 IPR029058 Alpha/Beta hydrolase fold RK88_RS12710 IPR002925 Dienelactone hydrolase RK88_RS12720 IPR009164 Fructose-1,6-bisphosphatase class 3 RK88_RS12730 IPR003439 ABC transporter-like RK88_RS12730 IPR017871 ABC transporter, conserved site RK88_RS12730 IPR003593 AAA+ ATPase domain RK88_RS12730 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS12740 IPR004839 Aminotransferase, class I/classII RK88_RS12740 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS12740 IPR000524 Transcription regulator HTH, GntR RK88_RS12740 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS12740 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS12740 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS12740 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS12750 IPR001123 Amino acid exporter protein, LeuE-type RK88_RS12755 IPR032816 SNARE associated Golgi protein RK88_RS12760 IPR011701 Major facilitator superfamily RK88_RS12760 IPR020846 Major facilitator superfamily domain RK88_RS12760 IPR000849 Sugar phosphate transporter RK88_RS12760 IPR036259 MFS transporter superfamily RK88_RS12770 IPR018691 Protein of unknown function DUF2188 RK88_RS12775 IPR007685 RelA/SpoT RK88_RS12780 IPR000551 MerR-type HTH domain RK88_RS12780 IPR009061 Putative DNA-binding domain superfamily RK88_RS12785 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS12785 IPR011711 GntR, C-terminal RK88_RS12785 IPR008920 Transcription regulator FadR/GntR, C-terminal RK88_RS12785 IPR000524 Transcription regulator HTH, GntR RK88_RS12785 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS12790 IPR018485 Carbohydrate kinase, FGGY, C-terminal RK88_RS12790 IPR018483 Carbohydrate kinase, FGGY, conserved site RK88_RS12790 IPR018484 Carbohydrate kinase, FGGY, N-terminal RK88_RS12790 IPR006002 Gluconate kinase RK88_RS12790 IPR000577 Carbohydrate kinase, FGGY RK88_RS12795 IPR003474 Gluconate transporter RK88_RS12810 IPR005877 YSIRK Gram-positive signal peptide RK88_RS12810 IPR041171 SDR-like Ig domain RK88_RS12810 IPR019931 LPXTG cell wall anchor domain RK88_RS12810 IPR019948 Gram-positive LPXTG cell wall anchor RK88_RS12810 IPR011266 Fibrinogen-binding domain 2 RK88_RS12810 IPR011252 Fibrogen-binding domain 1 RK88_RS12810 IPR008966 Adhesion domain superfamily RK88_RS12810 IPR004237 Fibronectin binding repeat RK88_RS12820 IPR029044 Nucleotide-diphospho-sugar transferases RK88_RS12820 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type RK88_RS12820 IPR005835 Nucleotidyl transferase domain RK88_RS12835 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RK88_RS12835 IPR005843 Alpha-D-phosphohexomutase, C-terminal RK88_RS12835 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RK88_RS12835 IPR005841 Alpha-D-phosphohexomutase superfamily RK88_RS12835 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RK88_RS12835 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RK88_RS12835 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RK88_RS12835 IPR016066 Alpha-D-phosphohexomutase, conserved site RK88_RS12840 IPR020476 NUDIX hydrolase RK88_RS12840 IPR000086 NUDIX hydrolase domain RK88_RS12840 IPR015797 NUDIX hydrolase-like domain superfamily RK88_RS12840 IPR020084 NUDIX hydrolase, conserved site RK88_RS12850 IPR007595 Csa family RK88_RS12850 IPR038641 Csa superfamily RK88_RS12860 IPR007595 Csa family RK88_RS12860 IPR038641 Csa superfamily RK88_RS12920 IPR029032 AhpD-like RK88_RS12920 IPR004675 Alkylhydroperoxidase AhpD core RK88_RS12920 IPR003779 Carboxymuconolactone decarboxylase-like RK88_RS12925 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT RK88_RS12925 IPR011540 AbgT, Proteobacteria RK88_RS12930 IPR036291 NAD(P)-binding domain superfamily RK88_RS12930 IPR002347 Short-chain dehydrogenase/reductase SDR RK88_RS12930 IPR020904 Short-chain dehydrogenase/reductase, conserved site RK88_RS12935 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like RK88_RS12935 IPR001279 Metallo-beta-lactamase RK88_RS12945 IPR004298 Nicotianamine synthase RK88_RS12945 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK88_RS12950 IPR016935 Opine metallophore dehydrogenase RK88_RS12955 IPR023765 Solute-binding protein family 5, conserved site RK88_RS12955 IPR039424 Solute-binding protein family 5 RK88_RS12955 IPR030678 Peptide/nickel binding protein, MppA-type RK88_RS12955 IPR011980 Nickel ABC transporter, substrate-binding protein NikA RK88_RS12955 IPR000914 Solute-binding protein family 5 domain RK88_RS12960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS12960 IPR035906 MetI-like superfamily RK88_RS12965 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RK88_RS12965 IPR035906 MetI-like superfamily RK88_RS12965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS12970 IPR017871 ABC transporter, conserved site RK88_RS12970 IPR003439 ABC transporter-like RK88_RS12970 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS12970 IPR003593 AAA+ ATPase domain RK88_RS12975 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS12975 IPR003439 ABC transporter-like RK88_RS12975 IPR003593 AAA+ ATPase domain RK88_RS12975 IPR017871 ABC transporter, conserved site RK88_RS12980 IPR011701 Major facilitator superfamily RK88_RS12980 IPR020846 Major facilitator superfamily domain RK88_RS12980 IPR036259 MFS transporter superfamily RK88_RS12990 IPR013785 Aldolase-type TIM barrel RK88_RS12990 IPR024188 Glutamate synthase large subunit-like protein RK88_RS12990 IPR002932 Glutamate synthase domain RK88_RS12990 IPR027283 Glutamate synthase large subunit-like protein, bacteria RK88_RS12995 IPR036699 YehR-like superfamily RK88_RS12995 IPR009736 Protein of unknown function DUF1307 RK88_RS13000 IPR008007 Peptidase M42 RK88_RS13000 IPR023367 Peptidase M42, domain 2 RK88_RS13005 IPR017871 ABC transporter, conserved site RK88_RS13005 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS13005 IPR003593 AAA+ ATPase domain RK88_RS13005 IPR003439 ABC transporter-like RK88_RS13010 IPR005226 UPF0014 family RK88_RS13015 IPR036259 MFS transporter superfamily RK88_RS13015 IPR020846 Major facilitator superfamily domain RK88_RS13015 IPR011701 Major facilitator superfamily RK88_RS13020 IPR002018 Carboxylesterase, type B RK88_RS13020 IPR029058 Alpha/Beta hydrolase fold RK88_RS13020 IPR019826 Carboxylesterase type B, active site RK88_RS13020 IPR019819 Carboxylesterase type B, conserved site RK88_RS13020 IPR000997 Cholinesterase RK88_RS13025 IPR002293 Amino acid/polyamine transporter I RK88_RS13030 IPR014922 Domain of unknown function DUF1801 RK88_RS13030 IPR016786 Uncharacterised protein YdeI, bacterial RK88_RS13045 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS13045 IPR005892 Glycine betaine transport ATP-binding subunit RK88_RS13045 IPR000644 CBS domain RK88_RS13045 IPR017871 ABC transporter, conserved site RK88_RS13045 IPR003439 ABC transporter-like RK88_RS13045 IPR003593 AAA+ ATPase domain RK88_RS13050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS13050 IPR035906 MetI-like superfamily RK88_RS13055 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain RK88_RS13060 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS13060 IPR035906 MetI-like superfamily RK88_RS13065 IPR011701 Major facilitator superfamily RK88_RS13065 IPR020846 Major facilitator superfamily domain RK88_RS13065 IPR036259 MFS transporter superfamily RK88_RS13070 IPR013752 Ketopantoate reductase, C-terminal domain RK88_RS13070 IPR003710 Ketopantoate reductase ApbA/PanE RK88_RS13070 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RK88_RS13070 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RK88_RS13070 IPR013332 Ketopantoate reductase, N-terminal domain RK88_RS13070 IPR036291 NAD(P)-binding domain superfamily RK88_RS13080 IPR001466 Beta-lactamase-related RK88_RS13080 IPR012338 Beta-lactamase/transpeptidase-like RK88_RS13090 IPR002293 Amino acid/polyamine transporter I RK88_RS13100 IPR002014 VHS domain RK88_RS13100 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria RK88_RS13100 IPR006153 Cation/H+ exchanger RK88_RS13100 IPR018422 Cation/H+ exchanger, CPA1 family RK88_RS13105 IPR004840 Amino acid permease, conserved site RK88_RS13105 IPR004841 Amino acid permease/ SLC12A domain RK88_RS13125 IPR004812 Drug resistance transporter Bcr/CmlA subfamily RK88_RS13125 IPR036259 MFS transporter superfamily RK88_RS13125 IPR020846 Major facilitator superfamily domain RK88_RS13125 IPR011701 Major facilitator superfamily RK88_RS13125 IPR004734 Multidrug resistance protein RK88_RS13135 IPR004381 Glycerate kinase RK88_RS13135 IPR018193 Glycerate kinase, flavodoxin-like fold RK88_RS13135 IPR018197 Glycerate kinase, restriction-enzyme-like fold RK88_RS13135 IPR036129 Glycerate kinase superfamily RK88_RS13155 IPR007037 Siderophore-interacting protein, C-terminal domain RK88_RS13155 IPR013113 FAD-binding 9, siderophore-interacting RK88_RS13155 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS13155 IPR017927 FAD-binding domain, ferredoxin reductase-type RK88_RS13155 IPR017871 ABC transporter, conserved site RK88_RS13155 IPR003439 ABC transporter-like RK88_RS13155 IPR036640 ABC transporter type 1, transmembrane domain superfamily RK88_RS13155 IPR017938 Riboflavin synthase-like beta-barrel RK88_RS13155 IPR003593 AAA+ ATPase domain RK88_RS13155 IPR011527 ABC transporter type 1, transmembrane domain RK88_RS13155 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain RK88_RS13160 IPR039421 Type I protein exporter RK88_RS13160 IPR003593 AAA+ ATPase domain RK88_RS13160 IPR011527 ABC transporter type 1, transmembrane domain RK88_RS13160 IPR011917 ABC transporter, lipid A export, MsbA RK88_RS13160 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS13160 IPR017871 ABC transporter, conserved site RK88_RS13160 IPR036640 ABC transporter type 1, transmembrane domain superfamily RK88_RS13160 IPR003439 ABC transporter-like RK88_RS13175 IPR004472 Dethiobiotin synthase BioD RK88_RS13175 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS13180 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS13180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS13180 IPR005814 Aminotransferase class-III RK88_RS13180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS13180 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA RK88_RS13185 IPR006638 Elp3/MiaB/NifB RK88_RS13185 IPR010722 Biotin and thiamin synthesis-associated domain RK88_RS13185 IPR013785 Aldolase-type TIM barrel RK88_RS13185 IPR007197 Radical SAM RK88_RS13185 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB RK88_RS13185 IPR024177 Biotin synthase RK88_RS13190 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type RK88_RS13190 IPR015421 Pyridoxal phosphate-dependent transferase, major domain RK88_RS13190 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 RK88_RS13190 IPR015424 Pyridoxal phosphate-dependent transferase RK88_RS13190 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site RK88_RS13190 IPR004839 Aminotransferase, class I/classII RK88_RS13195 IPR005499 6-carboxyhexanoate--CoA ligase RK88_RS13205 IPR036435 Leukocidin/porin MspA superfamily RK88_RS13205 IPR003963 Bi-component toxin, staphylococci RK88_RS13205 IPR016183 Leukocidin/Hemolysin toxin RK88_RS13210 IPR003963 Bi-component toxin, staphylococci RK88_RS13210 IPR016183 Leukocidin/Hemolysin toxin RK88_RS13210 IPR036435 Leukocidin/porin MspA superfamily RK88_RS13215 IPR003963 Bi-component toxin, staphylococci RK88_RS13215 IPR016183 Leukocidin/Hemolysin toxin RK88_RS13215 IPR036435 Leukocidin/porin MspA superfamily RK88_RS13230 IPR009063 Immunoglobulin/albumin-binding domain superfamily RK88_RS13230 IPR003132 Protein A, Ig-binding domain RK88_RS13230 IPR021657 Immunoglobulin-binding protein Sbi, domain IV RK88_RS13230 IPR041909 Sbi, C3 binding domain IV RK88_RS13240 IPR027470 Cation efflux protein, cytoplasmic domain RK88_RS13240 IPR002524 Cation efflux protein RK88_RS13240 IPR036837 Cation efflux protein, cytoplasmic domain superfamily RK88_RS13240 IPR027469 Cation efflux transmembrane domain superfamily RK88_RS13245 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site RK88_RS13245 IPR029033 Histidine phosphatase superfamily RK88_RS13245 IPR013078 Histidine phosphatase superfamily, clade-1 RK88_RS13245 IPR005952 Phosphoglycerate mutase 1 RK88_RS13260 IPR011701 Major facilitator superfamily RK88_RS13260 IPR020846 Major facilitator superfamily domain RK88_RS13260 IPR036259 MFS transporter superfamily RK88_RS13260 IPR004638 Drug resistance transporter EmrB-like RK88_RS13265 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RK88_RS13265 IPR018313 Solute-binding protein family 3, conserved site RK88_RS13270 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain RK88_RS13270 IPR035906 MetI-like superfamily RK88_RS13270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS13275 IPR003593 AAA+ ATPase domain RK88_RS13275 IPR003439 ABC transporter-like RK88_RS13275 IPR017871 ABC transporter, conserved site RK88_RS13275 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type RK88_RS13275 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS13280 IPR016181 Acyl-CoA N-acyltransferase RK88_RS13280 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm RK88_RS13280 IPR003447 FemABX peptidyl transferase RK88_RS13305 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily RK88_RS13305 IPR009614 Toxin YoeB RK88_RS13310 IPR006129 Adhesin B RK88_RS13310 IPR012674 Calycin RK88_RS13310 IPR006128 Adhesion lipoprotein RK88_RS13310 IPR006127 Periplasmic solute binding protein, ZnuA-like RK88_RS13310 IPR015304 ZinT domain RK88_RS13325 IPR023271 Aquaporin-like RK88_RS13325 IPR000292 Formate/nitrite transporter RK88_RS13325 IPR024002 Formate/nitrite transporter, conserved site RK88_RS13330 IPR016181 Acyl-CoA N-acyltransferase RK88_RS13330 IPR000182 GNAT domain RK88_RS13340 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site RK88_RS13340 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal RK88_RS13340 IPR007419 BFD-like [2Fe-2S]-binding domain RK88_RS13340 IPR023753 FAD/NAD(P)-binding domain RK88_RS13340 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB RK88_RS13340 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS13340 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily RK88_RS13340 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain RK88_RS13340 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain RK88_RS13340 IPR017121 Nitrite reductase [NAD(P)H], large subunit RK88_RS13340 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily RK88_RS13340 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily RK88_RS13345 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily RK88_RS13345 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type RK88_RS13345 IPR017941 Rieske [2Fe-2S] iron-sulphur domain RK88_RS13350 IPR014776 Tetrapyrrole methylase, subdomain 2 RK88_RS13350 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site RK88_RS13350 IPR035996 Tetrapyrrole methylase superfamily RK88_RS13350 IPR000878 Tetrapyrrole methylase RK88_RS13350 IPR014777 Tetrapyrrole methylase, subdomain 1 RK88_RS13350 IPR006366 Uroporphyrin-III C-methyltransferase RK88_RS13355 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RK88_RS13355 IPR006656 Molybdopterin oxidoreductase RK88_RS13355 IPR009010 Aspartate decarboxylase-like domain superfamily RK88_RS13355 IPR006468 Nitrate reductase, alpha subunit RK88_RS13355 IPR028189 Nitrate reductase, alpha subunit, N-terminal RK88_RS13355 IPR037943 Nitrate reductase alpha subunit-like, MopB domain RK88_RS13355 IPR006657 Molybdopterin dinucleotide-binding domain RK88_RS13355 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RK88_RS13355 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RK88_RS13360 IPR029263 Respiratory nitrate reductase beta, C-terminal RK88_RS13360 IPR038262 Nitrate reductase beta, C-terminal domain superfamily RK88_RS13360 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RK88_RS13360 IPR006547 Nitrate reductase, beta subunit RK88_RS13370 IPR036197 NarG-like superfamily RK88_RS13370 IPR003816 Nitrate reductase, gamma subunit RK88_RS13370 IPR023234 NarG-like domain RK88_RS13380 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS13380 IPR005467 Histidine kinase domain RK88_RS13380 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain RK88_RS13380 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RK88_RS13380 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS13380 IPR017203 Signal transduction histidine kinase, NreB RK88_RS13385 IPR016032 Signal transduction response regulator, C-terminal effector RK88_RS13385 IPR011006 CheY-like superfamily RK88_RS13385 IPR001789 Signal transduction response regulator, receiver domain RK88_RS13385 IPR000792 Transcription regulator LuxR, C-terminal RK88_RS13400 IPR036259 MFS transporter superfamily RK88_RS13400 IPR020846 Major facilitator superfamily domain RK88_RS13400 IPR011701 Major facilitator superfamily RK88_RS13410 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS13410 IPR000835 MarR-type HTH domain RK88_RS13410 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS13420 IPR036458 Sodium:dicarboxylate symporter superfamily RK88_RS13420 IPR018107 Sodium:dicarboxylate symporter, conserved site RK88_RS13420 IPR001991 Sodium:dicarboxylate symporter RK88_RS13420 IPR033380 Glutamate-aspartate symport protein GltP/GltT RK88_RS13435 IPR012349 FMN-binding split barrel RK88_RS13435 IPR038725 General stress protein, FMN-binding split barrel domain RK88_RS13450 IPR003352 Phosphotransferase system, EIIC RK88_RS13450 IPR036878 Glucose permease domain IIB RK88_RS13450 IPR013013 Phosphotransferase system, EIIC component, type 1 RK88_RS13450 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RK88_RS13450 IPR001996 Phosphotransferase system, IIB component, type 1 RK88_RS13450 IPR010973 Phosphotransferase system, sucrose-specific IIBC component RK88_RS13465 IPR017501 Phage infection protein, YhgE, C-terminal RK88_RS13465 IPR017500 Phage infection protein, YhgE, N-terminal RK88_RS13465 IPR023908 xxxLxxG heptad repeat RK88_RS13485 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS13485 IPR022890 Ferredoxin--NADP reductase, type 2 RK88_RS13485 IPR023753 FAD/NAD(P)-binding domain RK88_RS13495 IPR014188 Acrylyl-CoA reductase AcuI RK88_RS13495 IPR013149 Alcohol dehydrogenase, C-terminal RK88_RS13495 IPR013154 Alcohol dehydrogenase, N-terminal RK88_RS13495 IPR011032 GroES-like superfamily RK88_RS13495 IPR036291 NAD(P)-binding domain superfamily RK88_RS13495 IPR020843 Polyketide synthase, enoylreductase domain RK88_RS13500 IPR016181 Acyl-CoA N-acyltransferase RK88_RS13500 IPR000182 GNAT domain RK88_RS13510 IPR007554 CDP-glycerol glycerophosphotransferase RK88_RS13515 IPR003804 L-lactate permease RK88_RS13520 IPR006231 Malate:quinone-oxidoreductase RK88_RS13520 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS13530 IPR003593 AAA+ ATPase domain RK88_RS13530 IPR003439 ABC transporter-like RK88_RS13530 IPR017871 ABC transporter, conserved site RK88_RS13530 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS13545 IPR007492 LytTR DNA-binding domain RK88_RS13550 IPR004358 Signal transduction histidine kinase-related protein, C-terminal RK88_RS13550 IPR003660 HAMP domain RK88_RS13550 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily RK88_RS13550 IPR036890 Histidine kinase/HSP90-like ATPase superfamily RK88_RS13550 IPR005467 Histidine kinase domain RK88_RS13550 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain RK88_RS13550 IPR003594 Histidine kinase/HSP90-like ATPase RK88_RS13555 IPR001789 Signal transduction response regulator, receiver domain RK88_RS13555 IPR011006 CheY-like superfamily RK88_RS13555 IPR001867 OmpR/PhoB-type DNA-binding domain RK88_RS13555 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS13555 IPR039420 Transcriptional regulatory protein WalR-like RK88_RS13560 IPR003838 ABC transporter permease protein domain RK88_RS13565 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS13565 IPR003439 ABC transporter-like RK88_RS13565 IPR003593 AAA+ ATPase domain RK88_RS13575 IPR000835 MarR-type HTH domain RK88_RS13575 IPR011991 ArsR-like helix-turn-helix domain RK88_RS13575 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS13575 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS13585 IPR023599 Membrane-associated protein TcaA RK88_RS13595 IPR036259 MFS transporter superfamily RK88_RS13595 IPR004734 Multidrug resistance protein RK88_RS13595 IPR011701 Major facilitator superfamily RK88_RS13595 IPR005829 Sugar transporter, conserved site RK88_RS13595 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG RK88_RS13595 IPR020846 Major facilitator superfamily domain RK88_RS13610 IPR011053 Single hybrid motif RK88_RS13615 IPR036259 MFS transporter superfamily RK88_RS13615 IPR004638 Drug resistance transporter EmrB-like RK88_RS13615 IPR011701 Major facilitator superfamily RK88_RS13615 IPR020846 Major facilitator superfamily domain RK88_RS13625 IPR029058 Alpha/Beta hydrolase fold RK88_RS13625 IPR000084 PE-PGRS family, N-terminal RK88_RS13625 IPR013094 Alpha/beta hydrolase fold-3 RK88_RS13640 IPR004488 Magnesium/cobalt transport protein CorA RK88_RS13640 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB RK88_RS13645 IPR013785 Aldolase-type TIM barrel RK88_RS13645 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent RK88_RS13645 IPR000262 FMN-dependent dehydrogenase RK88_RS13650 IPR004445 Sodium/glutamate symport carrier protein GltS RK88_RS13660 IPR036995 Methylpurine-DNA glycosylase superfamily RK88_RS13660 IPR003180 Methylpurine-DNA glycosylase RK88_RS13660 IPR011034 Formyl transferase-like, C-terminal domain superfamily RK88_RS13670 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS13670 IPR017871 ABC transporter, conserved site RK88_RS13670 IPR025302 Domain of unknown function DUF4162 RK88_RS13670 IPR003593 AAA+ ATPase domain RK88_RS13670 IPR003439 ABC transporter-like RK88_RS13685 IPR003844 Uncharacterised protein family UPF0060 RK88_RS13690 IPR014718 Glycoside hydrolase-type carbohydrate-binding RK88_RS13690 IPR011013 Galactose mutarotase-like domain superfamily RK88_RS13690 IPR015443 Aldose 1-epimerase RK88_RS13690 IPR018052 Aldose 1-epimerase, conserved site RK88_RS13690 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase RK88_RS13695 IPR011037 Pyruvate kinase-like, insert domain superfamily RK88_RS13695 IPR005302 Molybdenum cofactor sulfurase, C-terminal RK88_RS13695 IPR005163 3-alpha domain RK88_RS13700 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup RK88_RS13700 IPR004788 Ribose 5-phosphate isomerase, type A RK88_RS13700 IPR037171 NagB/RpiA transferase-like RK88_RS13710 IPR023696 Ureohydrolase domain superfamily RK88_RS13710 IPR006035 Ureohydrolase RK88_RS13710 IPR005923 Formiminoglutamase RK88_RS13715 IPR037523 Vicinal oxygen chelate (VOC) domain RK88_RS13715 IPR022858 Metallothiol transferase FosB RK88_RS13715 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK88_RS13715 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK88_RS13720 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS13720 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS13720 IPR000847 Transcription regulator HTH, LysR RK88_RS13720 IPR005119 LysR, substrate-binding RK88_RS13725 IPR023637 Urocanase RK88_RS13725 IPR035401 Urocanase, C-terminal domain RK88_RS13725 IPR023636 Urocanase conserved site RK88_RS13725 IPR035400 Urocanase, N-terminal domain RK88_RS13725 IPR035085 Urocanase, Rossmann-like domain RK88_RS13725 IPR036190 Urocanase superfamily RK88_RS13725 IPR038364 Urocanase, central domain superfamily RK88_RS13730 IPR032466 Metal-dependent hydrolase RK88_RS13730 IPR011059 Metal-dependent hydrolase, composite domain superfamily RK88_RS13730 IPR005920 Imidazolonepropionase RK88_RS13730 IPR006680 Amidohydrolase-related RK88_RS13740 IPR020904 Short-chain dehydrogenase/reductase, conserved site RK88_RS13740 IPR002347 Short-chain dehydrogenase/reductase SDR RK88_RS13740 IPR036291 NAD(P)-binding domain superfamily RK88_RS13760 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS13760 IPR001347 Sugar isomerase (SIS) RK88_RS13760 IPR035472 RpiR-like, SIS domain RK88_RS13760 IPR009057 Homeobox-like domain superfamily RK88_RS13760 IPR000281 Helix-turn-helix protein RpiR RK88_RS13765 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component RK88_RS13765 IPR036878 Glucose permease domain IIB RK88_RS13765 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site RK88_RS13765 IPR003352 Phosphotransferase system, EIIC RK88_RS13765 IPR013013 Phosphotransferase system, EIIC component, type 1 RK88_RS13765 IPR001996 Phosphotransferase system, IIB component, type 1 RK88_RS13765 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component RK88_RS13780 IPR023214 HAD superfamily RK88_RS13780 IPR041492 Haloacid dehalogenase-like hydrolase RK88_RS13780 IPR036412 HAD-like superfamily RK88_RS13780 IPR006439 HAD hydrolase, subfamily IA RK88_RS13780 IPR023198 Phosphoglycolate phosphatase-like, domain 2 RK88_RS13800 IPR004841 Amino acid permease/ SLC12A domain RK88_RS13800 IPR004840 Amino acid permease, conserved site RK88_RS13815 IPR003675 CAAX prenyl protease 2 RK88_RS13830 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU RK88_RS13830 IPR004474 Cell envelope-related transcriptional attenuator domain RK88_RS13840 IPR006657 Molybdopterin dinucleotide-binding domain RK88_RS13840 IPR006478 Formate dehydrogenase, alpha subunit RK88_RS13840 IPR041924 Formate dehydrogenase H, N-terminal RK88_RS13840 IPR009010 Aspartate decarboxylase-like domain superfamily RK88_RS13840 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding RK88_RS13840 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain RK88_RS13840 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RK88_RS13840 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RK88_RS13840 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain RK88_RS13840 IPR006656 Molybdopterin oxidoreductase RK88_RS13840 IPR036010 2Fe-2S ferredoxin-like superfamily RK88_RS13840 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site RK88_RS13840 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site RK88_RS13855 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily RK88_RS13855 IPR025987 GW domain RK88_RS13855 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain RK88_RS13855 IPR038200 GW domain superfamily RK88_RS13855 IPR002502 N-acetylmuramoyl-L-alanine amidase domain RK88_RS13865 IPR002938 FAD-binding domain RK88_RS13865 IPR036188 FAD/NAD(P)-binding domain superfamily RK88_RS13870 IPR036291 NAD(P)-binding domain superfamily RK88_RS13870 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain RK88_RS13870 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RK88_RS13880 IPR007921 CHAP domain RK88_RS13880 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS13890 IPR036291 NAD(P)-binding domain superfamily RK88_RS13890 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RK88_RS13890 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RK88_RS13890 IPR003421 Opine dehydrogenase RK88_RS13890 IPR013332 Ketopantoate reductase, N-terminal domain RK88_RS13895 IPR004770 Na+/H+ antiporter NhaC RK88_RS13895 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal RK88_RS13905 IPR038765 Papain-like cysteine peptidase superfamily RK88_RS13905 IPR007921 CHAP domain RK88_RS13930 IPR010166 Transcriptional regulator SarA/Rot RK88_RS13930 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS13930 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS13935 IPR002669 Urease accessory protein UreD RK88_RS13940 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RK88_RS13940 IPR004400 Urease accessory protein UreG RK88_RS13940 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS13945 IPR038277 UreF domain superfamily RK88_RS13945 IPR002639 Urease accessory protein UreF RK88_RS13950 IPR004029 UreE urease accessory, N-terminal RK88_RS13950 IPR012406 Urease accessory protein UreE RK88_RS13950 IPR007864 Urease accessory protein UreE, C-terminal domain RK88_RS13950 IPR036675 UreE, C-terminal domain superfamily RK88_RS13950 IPR036118 UreE urease accessory, N-terminal domain superfamily RK88_RS13955 IPR029754 Urease nickel binding site RK88_RS13955 IPR017951 Urease alpha subunit, C-terminal RK88_RS13955 IPR005848 Urease, alpha subunit RK88_RS13955 IPR032466 Metal-dependent hydrolase RK88_RS13955 IPR017950 Urease active site RK88_RS13955 IPR011612 Urease alpha-subunit, N-terminal domain RK88_RS13955 IPR006680 Amidohydrolase-related RK88_RS13955 IPR011059 Metal-dependent hydrolase, composite domain superfamily RK88_RS13960 IPR002019 Urease, beta subunit RK88_RS13960 IPR036461 Urease, beta subunit superfamily RK88_RS13965 IPR012010 Urease, gamma subunit RK88_RS13965 IPR002026 Urease, gamma/gamma-beta subunit RK88_RS13965 IPR036463 Urease, gamma subunit superfamily RK88_RS13970 IPR029020 Ammonium/urea transporter RK88_RS13970 IPR004937 Urea transporter RK88_RS13975 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily RK88_RS13975 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily RK88_RS13975 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal RK88_RS13975 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal RK88_RS13975 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain RK88_RS13975 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RK88_RS13985 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA RK88_RS13985 IPR023186 Inosine/uridine-preferring nucleoside hydrolase RK88_RS13985 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RK88_RS13985 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site RK88_RS13985 IPR036452 Ribonucleoside hydrolase-like RK88_RS13990 IPR003784 BioY protein RK88_RS14000 IPR016193 Cytidine deaminase-like RK88_RS14000 IPR003786 Sulfur carrier protein FdhD RK88_RS14005 IPR005950 Molybdate ABC transporter, substrate-binding protein RK88_RS14005 IPR041879 YvgL-like, substrate binding domain RK88_RS14010 IPR011867 Molybdate ABC transporter, permease protein RK88_RS14010 IPR035906 MetI-like superfamily RK88_RS14010 IPR000515 ABC transporter type 1, transmembrane domain MetI-like RK88_RS14015 IPR005116 Transport-associated OB, type 1 RK88_RS14015 IPR004606 Molybdenum-pterin binding RK88_RS14015 IPR011868 Molybdate ABC transporter, ATP-binding protein RK88_RS14015 IPR008995 Molybdate/tungstate binding, C-terminal RK88_RS14015 IPR015852 ABC transporter, molybdenum import, ModC RK88_RS14015 IPR017871 ABC transporter, conserved site RK88_RS14015 IPR003439 ABC transporter-like RK88_RS14015 IPR003593 AAA+ ATPase domain RK88_RS14015 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS14020 IPR035985 Ubiquitin-activating enzyme RK88_RS14020 IPR000594 THIF-type NAD/FAD binding fold RK88_RS14025 IPR012245 Molybdenum cofactor biosynthesis protein MoaB RK88_RS14025 IPR036425 MoaB/Mog-like domain superfamily RK88_RS14025 IPR001453 MoaB/Mog domain RK88_RS14025 IPR008284 Molybdenum cofactor biosynthesis, conserved site RK88_RS14030 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain RK88_RS14030 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily RK88_RS14030 IPR023045 Molybdenum cofactor biosynthesis C RK88_RS14035 IPR036425 MoaB/Mog-like domain superfamily RK88_RS14035 IPR001453 MoaB/Mog domain RK88_RS14035 IPR038987 Molybdopterin biosynthesis protein MoeA-like RK88_RS14035 IPR036135 MoeA, N-terminal and linker domain superfamily RK88_RS14035 IPR005111 MoeA, C-terminal, domain IV RK88_RS14035 IPR005110 MoeA, N-terminal and linker domain RK88_RS14035 IPR036688 MoeA, C-terminal, domain IV superfamily RK88_RS14040 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain RK88_RS14040 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS14045 IPR003448 Molybdopterin biosynthesis MoaE RK88_RS14045 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily RK88_RS14050 IPR003749 Sulfur carrier ThiS/MoaD-like RK88_RS14050 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RK88_RS14050 IPR012675 Beta-grasp domain superfamily RK88_RS14055 IPR025877 MobA-like NTP transferase RK88_RS14055 IPR013482 Molybdenum cofactor guanylyltransferase RK88_RS14055 IPR029044 Nucleotide-diphospho-sugar transferases RK88_RS14060 IPR013483 Molybdenum cofactor biosynthesis protein A RK88_RS14060 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site RK88_RS14060 IPR010505 Molybdenum cofactor synthesis C-terminal RK88_RS14060 IPR007197 Radical SAM RK88_RS14060 IPR006638 Elp3/MiaB/NifB RK88_RS14060 IPR013785 Aldolase-type TIM barrel RK88_RS14080 IPR000835 MarR-type HTH domain RK88_RS14080 IPR010166 Transcriptional regulator SarA/Rot RK88_RS14080 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS14080 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS14090 IPR000835 MarR-type HTH domain RK88_RS14090 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS14090 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS14090 IPR023187 Transcriptional regulator MarR-type, conserved site RK88_RS14105 IPR003447 FemABX peptidyl transferase RK88_RS14105 IPR016181 Acyl-CoA N-acyltransferase RK88_RS14110 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RK88_RS14110 IPR001036 Acriflavin resistance protein RK88_RS14135 IPR010651 Sugar transport protein RK88_RS14150 IPR034144 DNA topoisomerase 3-like, TOPRIM domain RK88_RS14150 IPR006171 TOPRIM domain RK88_RS14150 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 RK88_RS14150 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RK88_RS14150 IPR003602 DNA topoisomerase, type IA, DNA-binding domain RK88_RS14150 IPR023405 DNA topoisomerase, type IA, core domain RK88_RS14150 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 RK88_RS14150 IPR013497 DNA topoisomerase, type IA, central RK88_RS14150 IPR023406 DNA topoisomerase, type IA, active site RK88_RS14150 IPR003601 DNA topoisomerase, type IA, domain 2 RK88_RS14150 IPR000380 DNA topoisomerase, type IA RK88_RS14150 IPR005738 DNA topoisomerase III RK88_RS14155 IPR026033 Azaguanine-like transporters RK88_RS14155 IPR006043 Xanthine/uracil/vitamin C permease RK88_RS14165 IPR036838 Ribosomal protein S10 domain superfamily RK88_RS14165 IPR027486 Ribosomal protein S10 domain RK88_RS14165 IPR018268 Ribosomal protein S10, conserved site RK88_RS14165 IPR001848 Ribosomal protein S10 RK88_RS14170 IPR000597 Ribosomal protein L3 RK88_RS14170 IPR019927 Ribosomal protein L3, bacterial/organelle-type RK88_RS14170 IPR009000 Translation protein, beta-barrel domain superfamily RK88_RS14170 IPR019926 Ribosomal protein L3, conserved site RK88_RS14175 IPR023574 Ribosomal protein L4 domain superfamily RK88_RS14175 IPR002136 Ribosomal protein L4/L1e RK88_RS14175 IPR013005 50S ribosomal protein uL4 RK88_RS14180 IPR013025 Ribosomal protein L25/L23 RK88_RS14180 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily RK88_RS14180 IPR012678 Ribosomal protein L23/L15e core domain superfamily RK88_RS14185 IPR022669 Ribosomal protein L2, C-terminal RK88_RS14185 IPR014722 Ribosomal protein L2, domain 2 RK88_RS14185 IPR002171 Ribosomal protein L2 RK88_RS14185 IPR022671 Ribosomal protein L2, conserved site RK88_RS14185 IPR014726 Ribosomal protein L2, domain 3 RK88_RS14185 IPR022666 Ribosomal Proteins L2, RNA binding domain RK88_RS14185 IPR012340 Nucleic acid-binding, OB-fold RK88_RS14185 IPR005880 Ribosomal protein L2, bacterial/organellar-type RK88_RS14185 IPR008991 Translation protein SH3-like domain superfamily RK88_RS14190 IPR023575 Ribosomal protein S19, superfamily RK88_RS14190 IPR020934 Ribosomal protein S19 conserved site RK88_RS14190 IPR005732 Ribosomal protein S19, bacterial-type RK88_RS14190 IPR002222 Ribosomal protein S19/S15 RK88_RS14195 IPR018260 Ribosomal protein L22/L17, conserved site RK88_RS14195 IPR001063 Ribosomal protein L22/L17 RK88_RS14195 IPR036394 Ribosomal protein L22/L17 superfamily RK88_RS14195 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type RK88_RS14200 IPR036419 Ribosomal protein S3, C-terminal domain superfamily RK88_RS14200 IPR001351 Ribosomal protein S3, C-terminal RK88_RS14200 IPR009019 K homology domain superfamily, prokaryotic type RK88_RS14200 IPR004044 K Homology domain, type 2 RK88_RS14200 IPR004087 K Homology domain RK88_RS14200 IPR018280 Ribosomal protein S3, conserved site RK88_RS14200 IPR015946 K homology domain-like, alpha/beta RK88_RS14200 IPR005704 Ribosomal protein S3, bacterial-type RK88_RS14205 IPR000114 Ribosomal protein L16 RK88_RS14205 IPR016180 Ribosomal protein L10e/L16 RK88_RS14205 IPR036920 Ribosomal protein L10e/L16 superfamily RK88_RS14205 IPR020798 Ribosomal protein L16, conserved site RK88_RS14210 IPR036049 Ribosomal protein L29/L35 superfamily RK88_RS14210 IPR001854 Ribosomal protein L29/L35 RK88_RS14215 IPR019984 30S ribosomal protein S17 RK88_RS14215 IPR000266 Ribosomal protein S17/S11 RK88_RS14215 IPR012340 Nucleic acid-binding, OB-fold RK88_RS14215 IPR019979 Ribosomal protein S17, conserved site RK88_RS14220 IPR036853 Ribosomal protein L14 superfamily RK88_RS14220 IPR000218 Ribosomal protein L14P RK88_RS14220 IPR005745 Ribosomal protein L14P, bacterial-type RK88_RS14220 IPR019972 Ribosomal protein L14P, conserved site RK88_RS14225 IPR041988 Ribosomal Protein L26/L24, KOW domain RK88_RS14225 IPR014722 Ribosomal protein L2, domain 2 RK88_RS14225 IPR003256 Ribosomal protein L24 RK88_RS14225 IPR005825 Ribosomal protein L24/L26, conserved site RK88_RS14225 IPR008991 Translation protein SH3-like domain superfamily RK88_RS14225 IPR005824 KOW RK88_RS14230 IPR022803 Ribosomal protein L5 domain superfamily RK88_RS14230 IPR002132 Ribosomal protein L5 RK88_RS14230 IPR020930 Ribosomal protein L5, bacterial-type RK88_RS14230 IPR031309 Ribosomal protein L5, C-terminal RK88_RS14230 IPR031310 Ribosomal protein L5, N-terminal RK88_RS14230 IPR020929 Ribosomal protein L5, conserved site RK88_RS14235 IPR023053 Ribosomal protein S14, type Z RK88_RS14235 IPR018271 Ribosomal protein S14, conserved site RK88_RS14235 IPR001209 Ribosomal protein S14 RK88_RS14240 IPR000630 Ribosomal protein S8 RK88_RS14240 IPR035987 Ribosomal protein S8 superfamily RK88_RS14245 IPR000702 Ribosomal protein L6 RK88_RS14245 IPR002358 Ribosomal protein L6, conserved site RK88_RS14245 IPR019906 Ribosomal protein L6, bacterial-type RK88_RS14245 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily RK88_RS14245 IPR020040 Ribosomal protein L6, alpha-beta domain RK88_RS14250 IPR005484 Ribosomal protein L18 RK88_RS14250 IPR004389 Ribosomal protein L18, bacterial-type RK88_RS14255 IPR000851 Ribosomal protein S5 RK88_RS14255 IPR005712 Ribosomal protein S5, bacterial-type RK88_RS14255 IPR018192 Ribosomal protein S5, N-terminal, conserved site RK88_RS14255 IPR005324 Ribosomal protein S5, C-terminal RK88_RS14255 IPR013810 Ribosomal protein S5, N-terminal RK88_RS14255 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS14255 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS14260 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily RK88_RS14260 IPR005996 Ribosomal protein L30, bacterial-type RK88_RS14260 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RK88_RS14265 IPR005749 Ribosomal protein L15, bacterial-type RK88_RS14265 IPR001196 Ribosomal protein L15, conserved site RK88_RS14265 IPR030878 Ribosomal protein L15 RK88_RS14265 IPR036227 Ribosomal L18e/L15P superfamily RK88_RS14265 IPR021131 Ribosomal protein L18e/L15P RK88_RS14270 IPR026593 Protein translocase subunit SecY RK88_RS14270 IPR002208 SecY/SEC61-alpha family RK88_RS14270 IPR030659 SecY conserved site RK88_RS14270 IPR023201 SecY domain superfamily RK88_RS14275 IPR000850 Adenylate kinase/UMP-CMP kinase RK88_RS14275 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS14275 IPR006259 Adenylate kinase subfamily RK88_RS14275 IPR007862 Adenylate kinase, active site lid domain RK88_RS14275 IPR008144 Guanylate kinase-like domain RK88_RS14275 IPR033690 Adenylate kinase, conserved site RK88_RS14280 IPR004368 Translation initiation factor IF-1 RK88_RS14280 IPR012340 Nucleic acid-binding, OB-fold RK88_RS14280 IPR006196 RNA-binding domain, S1, IF1 type RK88_RS14280 IPR022967 RNA-binding domain, S1 RK88_RS14285 IPR035977 Ribosomal protein L36 superfamily RK88_RS14285 IPR000473 Ribosomal protein L36 RK88_RS14290 IPR018269 Ribosomal protein S13, conserved site RK88_RS14290 IPR019980 Ribosomal protein S13, bacterial-type RK88_RS14290 IPR010979 Ribosomal protein S13-like, H2TH RK88_RS14290 IPR001892 Ribosomal protein S13 RK88_RS14290 IPR027437 30s ribosomal protein S13, C-terminal RK88_RS14295 IPR036967 Ribosomal protein S11 superfamily RK88_RS14295 IPR001971 Ribosomal protein S11 RK88_RS14295 IPR019981 Ribosomal protein S11, bacterial-type RK88_RS14295 IPR018102 Ribosomal S11, conserved site RK88_RS14300 IPR036643 DNA-directed RNA polymerase, insert domain superfamily RK88_RS14300 IPR011260 RNA polymerase, alpha subunit, C-terminal RK88_RS14300 IPR036603 RNA polymerase, RBP11-like subunit RK88_RS14300 IPR011773 DNA-directed RNA polymerase, alpha subunit RK88_RS14300 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type RK88_RS14300 IPR011262 DNA-directed RNA polymerase, insert domain RK88_RS14305 IPR036373 Ribosomal protein L17 superfamily RK88_RS14305 IPR000456 Ribosomal protein L17 RK88_RS14315 IPR003593 AAA+ ATPase domain RK88_RS14315 IPR017871 ABC transporter, conserved site RK88_RS14315 IPR015856 ABC transporter, CbiO/EcfA subunit RK88_RS14315 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 RK88_RS14315 IPR003439 ABC transporter-like RK88_RS14315 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS14320 IPR003593 AAA+ ATPase domain RK88_RS14320 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 RK88_RS14320 IPR017871 ABC transporter, conserved site RK88_RS14320 IPR003439 ABC transporter-like RK88_RS14320 IPR015856 ABC transporter, CbiO/EcfA subunit RK88_RS14320 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS14325 IPR003339 ABC/ECF transporter, transmembrane component RK88_RS14325 IPR024919 ECF transporter transmembrane protein EcfT RK88_RS14330 IPR020095 Pseudouridine synthase I, TruA, C-terminal RK88_RS14330 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain RK88_RS14330 IPR001406 Pseudouridine synthase I, TruA RK88_RS14330 IPR020103 Pseudouridine synthase, catalytic domain superfamily RK88_RS14335 IPR023563 Ribosomal protein L13, conserved site RK88_RS14335 IPR005822 Ribosomal protein L13 RK88_RS14335 IPR036899 Ribosomal protein L13 superfamily RK88_RS14335 IPR005823 Ribosomal protein L13, bacterial-type RK88_RS14340 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK88_RS14340 IPR023035 Ribosomal protein S9, bacterial/plastid RK88_RS14340 IPR020574 Ribosomal protein S9, conserved site RK88_RS14340 IPR020568 Ribosomal protein S5 domain 2-type fold RK88_RS14340 IPR000754 Ribosomal protein S9 RK88_RS14345 IPR033454 RecG, wedge domain RK88_RS14345 IPR011545 DEAD/DEAH box helicase domain RK88_RS14345 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK88_RS14345 IPR012340 Nucleic acid-binding, OB-fold RK88_RS14345 IPR038475 RecG, C-terminal domain superfamily RK88_RS14345 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS14345 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain RK88_RS14365 IPR029061 Thiamin diphosphate-binding fold RK88_RS14365 IPR029035 DHS-like NAD/FAD-binding domain superfamily RK88_RS14365 IPR012782 Acetolactate synthase, catabolic RK88_RS14365 IPR012000 Thiamine pyrophosphate enzyme, central domain RK88_RS14365 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain RK88_RS14365 IPR000399 TPP-binding enzyme, conserved site RK88_RS14365 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding RK88_RS14370 IPR005128 Alpha-acetolactate decarboxylase RK88_RS14380 IPR006380 Sucrose-phosphatase-like, N-terminal RK88_RS14380 IPR006379 HAD-superfamily hydrolase, subfamily IIB RK88_RS14380 IPR036412 HAD-like superfamily RK88_RS14390 IPR004103 Polysaccharide lyase family 8, C-terminal RK88_RS14390 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical RK88_RS14390 IPR003159 Polysaccharide lyase family 8, central domain RK88_RS14390 IPR014718 Glycoside hydrolase-type carbohydrate-binding RK88_RS14390 IPR038970 Polysaccharide lyase 8 RK88_RS14390 IPR011013 Galactose mutarotase-like domain superfamily RK88_RS14390 IPR011071 Polysaccharide lyase family 8-like, C-terminal RK88_RS14390 IPR008929 Chondroitin AC/alginate lyase RK88_RS14400 IPR009061 Putative DNA-binding domain superfamily RK88_RS14400 IPR000551 MerR-type HTH domain RK88_RS14405 IPR023210 NADP-dependent oxidoreductase domain RK88_RS14405 IPR020471 Aldo/keto reductase RK88_RS14405 IPR018170 Aldo/keto reductase, conserved site RK88_RS14405 IPR036812 NADP-dependent oxidoreductase domain superfamily RK88_RS14430 IPR026591 Sirtuin, catalytic core small domain superfamily RK88_RS14430 IPR028628 Sirtuin, class U RK88_RS14430 IPR029035 DHS-like NAD/FAD-binding domain superfamily RK88_RS14430 IPR003000 Sirtuin family RK88_RS14430 IPR026590 Sirtuin family, catalytic core domain RK88_RS14435 IPR001034 DeoR-type HTH domain RK88_RS14435 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS14435 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS14435 IPR037171 NagB/RpiA transferase-like RK88_RS14435 IPR018356 Transcription regulator, HTH DeoR-type, conserved site RK88_RS14435 IPR014036 DeoR C-terminal sensor domain RK88_RS14440 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family RK88_RS14440 IPR004783 Galactose-6-phosphate isomerase subunit LacA RK88_RS14440 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily RK88_RS14445 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family RK88_RS14445 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily RK88_RS14445 IPR004784 Galactose-6-phosphate isomerase subunit LacB RK88_RS14450 IPR011611 Carbohydrate kinase PfkB RK88_RS14450 IPR017583 Tagatose/fructose phosphokinase RK88_RS14450 IPR005926 Tagatose-6-phosphate kinase RK88_RS14450 IPR029056 Ribokinase-like RK88_RS14450 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site RK88_RS14455 IPR005927 Tagatose 1,6-diphosphate aldolase RK88_RS14455 IPR002915 DeoC/FbaB/ lacD aldolase RK88_RS14455 IPR013785 Aldolase-type TIM barrel RK88_RS14460 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit RK88_RS14460 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily RK88_RS14465 IPR003352 Phosphotransferase system, EIIC RK88_RS14465 IPR004801 Phosphotransferase system, lactose-specific IIC component RK88_RS14465 IPR036095 PTS system IIB component-like superfamily RK88_RS14465 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RK88_RS14465 IPR013012 Phosphotransferase system, EIIB component, type 3 RK88_RS14465 IPR004501 Phosphotransferase system, EIIC component, type 3 RK88_RS14465 IPR041713 PTS system lactose-specific EIICB component, IIB domain RK88_RS14470 IPR005928 6-phospho-beta-galactosidase RK88_RS14470 IPR001360 Glycoside hydrolase family 1 RK88_RS14470 IPR018120 Glycoside hydrolase family 1, active site RK88_RS14470 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RK88_RS14470 IPR017853 Glycoside hydrolase superfamily RK88_RS14480 IPR020843 Polyketide synthase, enoylreductase domain RK88_RS14480 IPR036291 NAD(P)-binding domain superfamily RK88_RS14480 IPR011032 GroES-like superfamily RK88_RS14480 IPR041694 Oxidoreductase, N-terminal domain RK88_RS14480 IPR013149 Alcohol dehydrogenase, C-terminal RK88_RS14485 IPR013149 Alcohol dehydrogenase, C-terminal RK88_RS14485 IPR013154 Alcohol dehydrogenase, N-terminal RK88_RS14485 IPR011032 GroES-like superfamily RK88_RS14485 IPR036291 NAD(P)-binding domain superfamily RK88_RS14485 IPR020843 Polyketide synthase, enoylreductase domain RK88_RS14485 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site RK88_RS14485 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 RK88_RS14490 IPR018093 BCCT transporter, conserved site RK88_RS14490 IPR000060 BCCT transporter family RK88_RS14505 IPR005531 Alkaline shock protein Asp23 RK88_RS14515 IPR036259 MFS transporter superfamily RK88_RS14515 IPR020846 Major facilitator superfamily domain RK88_RS14515 IPR010290 Transmembrane secretion effector RK88_RS14520 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal RK88_RS14520 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like RK88_RS14520 IPR022770 Ferric iron reductase FhuF domain RK88_RS14525 IPR029066 PLP-binding barrel RK88_RS14525 IPR001608 Alanine racemase, N-terminal RK88_RS14535 IPR002491 ABC transporter periplasmic binding domain RK88_RS14540 IPR000522 ABC transporter, permease protein, BtuC-like RK88_RS14540 IPR037294 ABC transporter, BtuC-like RK88_RS14545 IPR000522 ABC transporter, permease protein, BtuC-like RK88_RS14545 IPR037294 ABC transporter, BtuC-like RK88_RS14560 IPR007404 LexA-binding, inner membrane-associated putative hydrolase RK88_RS14565 IPR002618 UDPGP family RK88_RS14565 IPR029044 Nucleotide-diphospho-sugar transferases RK88_RS14565 IPR039741 UDP-sugar pyrophosphorylase RK88_RS14570 IPR005744 Hly-III RK88_RS14570 IPR004254 AdipoR/Haemolysin-III-related RK88_RS14575 IPR011701 Major facilitator superfamily RK88_RS14575 IPR020846 Major facilitator superfamily domain RK88_RS14575 IPR036259 MFS transporter superfamily RK88_RS14580 IPR031396 Multidrug resistance efflux pump SepA RK88_RS14590 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS14590 IPR000808 Mrp, conserved site RK88_RS14590 IPR019591 Mrp/NBP35 ATP-binding protein RK88_RS14590 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 RK88_RS14645 IPR006035 Ureohydrolase RK88_RS14645 IPR020855 Ureohydrolase, manganese-binding site RK88_RS14645 IPR014033 Arginase RK88_RS14645 IPR023696 Ureohydrolase domain superfamily RK88_RS14650 IPR014046 Diadenylate cyclase RK88_RS14650 IPR034701 Diadenylate cyclase CdaA RK88_RS14650 IPR003390 DNA integrity scanning protein, DisA, N-terminal RK88_RS14650 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily RK88_RS14660 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III RK88_RS14660 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I RK88_RS14660 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily RK88_RS14660 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II RK88_RS14660 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III RK88_RS14660 IPR005841 Alpha-D-phosphohexomutase superfamily RK88_RS14660 IPR016066 Alpha-D-phosphohexomutase, conserved site RK88_RS14660 IPR005843 Alpha-D-phosphohexomutase, C-terminal RK88_RS14660 IPR006352 Phosphoglucosamine mutase, bacterial type RK88_RS14670 IPR023028 Mannitol-1-phosphate 5-dehydrogenase RK88_RS14670 IPR013328 6-phosphogluconate dehydrogenase, domain 2 RK88_RS14670 IPR036291 NAD(P)-binding domain superfamily RK88_RS14670 IPR013131 Mannitol dehydrogenase, N-terminal RK88_RS14670 IPR023027 Mannitol dehydrogenase, conserved site RK88_RS14670 IPR013118 Mannitol dehydrogenase, C-terminal RK88_RS14670 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily RK88_RS14670 IPR000669 Mannitol dehydrogenase RK88_RS14675 IPR002178 PTS EIIA type-2 domain RK88_RS14675 IPR016152 Phosphotransferase/anion transporter RK88_RS14680 IPR016152 Phosphotransferase/anion transporter RK88_RS14680 IPR007737 Mga helix-turn-helix domain RK88_RS14680 IPR013196 Helix-turn-helix, type 11 RK88_RS14680 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RK88_RS14680 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS14680 IPR013011 Phosphotransferase system, EIIB component, type 2 RK88_RS14680 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS14680 IPR002178 PTS EIIA type-2 domain RK88_RS14680 IPR011608 PRD domain RK88_RS14680 IPR036095 PTS system IIB component-like superfamily RK88_RS14680 IPR036634 PRD domain superfamily RK88_RS14685 IPR029503 Phosphotransferase system EIIB component, mannitol-specific RK88_RS14685 IPR003352 Phosphotransferase system, EIIC RK88_RS14685 IPR013011 Phosphotransferase system, EIIB component, type 2 RK88_RS14685 IPR003501 Phosphotransferase system, EIIB component, type 2/3 RK88_RS14685 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC RK88_RS14685 IPR036095 PTS system IIB component-like superfamily RK88_RS14685 IPR013014 Phosphotransferase system, EIIC component, type 2 RK88_RS14695 IPR017932 Glutamine amidotransferase type 2 domain RK88_RS14695 IPR001347 Sugar isomerase (SIS) RK88_RS14695 IPR029055 Nucleophile aminohydrolases, N-terminal RK88_RS14695 IPR035490 GlmS/FrlB, SIS domain 2 RK88_RS14695 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising RK88_RS14695 IPR035466 GlmS/AgaS, SIS domain 1 RK88_RS14700 IPR003593 AAA+ ATPase domain RK88_RS14700 IPR003439 ABC transporter-like RK88_RS14700 IPR017871 ABC transporter, conserved site RK88_RS14700 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS14705 IPR023214 HAD superfamily RK88_RS14705 IPR006379 HAD-superfamily hydrolase, subfamily IIB RK88_RS14705 IPR036412 HAD-like superfamily RK88_RS14705 IPR000150 Cof family RK88_RS14740 IPR036837 Cation efflux protein, cytoplasmic domain superfamily RK88_RS14740 IPR027470 Cation efflux protein, cytoplasmic domain RK88_RS14740 IPR027469 Cation efflux transmembrane domain superfamily RK88_RS14740 IPR002524 Cation efflux protein RK88_RS14745 IPR036388 Winged helix-like DNA-binding domain superfamily RK88_RS14745 IPR001845 HTH ArsR-type DNA-binding domain RK88_RS14745 IPR018334 ArsR-type transcription regulator, HTH motif RK88_RS14745 IPR036390 Winged helix DNA-binding domain superfamily RK88_RS14745 IPR011991 ArsR-like helix-turn-helix domain RK88_RS14750 IPR036291 NAD(P)-binding domain superfamily RK88_RS14750 IPR016040 NAD(P)-binding domain RK88_RS14755 IPR001250 Mannose-6-phosphate isomerase, type I RK88_RS14755 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form RK88_RS14755 IPR014710 RmlC-like jelly roll fold RK88_RS14755 IPR011051 RmlC-like cupin domain superfamily RK88_RS14775 IPR002177 DNA-binding protein Dps RK88_RS14775 IPR009078 Ferritin-like superfamily RK88_RS14775 IPR012347 Ferritin-like RK88_RS14775 IPR008331 Ferritin/DPS protein domain RK88_RS14775 IPR023188 DNA-binding protein Dps, conserved site RK88_RS14805 IPR001584 Integrase, catalytic core RK88_RS14805 IPR036397 Ribonuclease H superfamily RK88_RS14805 IPR001598 Transposase, IS30, conserved site RK88_RS14805 IPR012337 Ribonuclease H-like superfamily RK88_RS14805 IPR025246 Transposase IS30-like HTH domain RK88_RS14875 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK88_RS14875 IPR002611 IstB-like ATP-binding protein RK88_RS14875 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein RK88_RS14875 IPR001270 ClpA/B family RK88_RS14875 IPR003593 AAA+ ATPase domain