RK98_RS00035 SM00919 Malic enzyme, NAD binding domain RK98_RS00035 SM01274 RK98_RS00035 RK98_RS00040 SM00481 DNA polymerase alpha chain like domain RK98_RS00050 SM00116 Domain in cystathionine beta-synthase and other proteins. RK98_RS00060 SM00849 Metallo-beta-lactamase superfamily RK98_RS00075 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RK98_RS00075 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RK98_RS00105 SM00981 RK98_RS00105 RK98_RS00125 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RK98_RS00135 SM00363 S4 RNA-binding domain RK98_RS00135 SM01390 RK98_RS00135 RK98_RS00185 SM00563 Phosphate acyltransferases RK98_RS00190 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RK98_RS00195 SM00363 S4 RNA-binding domain RK98_RS00210 SM00725 NEAr Transporter domain RK98_RS00240 SM00354 helix_turn _helix lactose operon repressor RK98_RS00250 SM00830 Chorismate mutase type II RK98_RS00275 SM00843 RK98_RS00275 RK98_RS00305 SM00849 Metallo-beta-lactamase superfamily RK98_RS00335 SM00363 S4 RNA-binding domain RK98_RS00355 SM00450 Rhodanese Homology Domain RK98_RS00370 SM00729 Elongator protein 3, MiaB family, Radical SAM RK98_RS00380 SM00347 helix_turn_helix multiple antibiotic resistance protein RK98_RS00425 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RK98_RS00435 SM00047 Lysozyme subfamily 2 RK98_RS00520 SM01234 RK98_RS00520 RK98_RS00540 SM00894 Excalibur calcium-binding domain RK98_RS00805 SM00382 ATPases associated with a variety of cellular activities RK98_RS00830 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK98_RS00865 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS00870 SM00421 helix_turn_helix, Lux Regulon RK98_RS00870 SM00448 cheY-homologous receiver domain RK98_RS00915 SM00382 ATPases associated with a variety of cellular activities RK98_RS00920 SM00062 Bacterial periplasmic substrate-binding proteins RK98_RS01115 SM00382 ATPases associated with a variety of cellular activities RK98_RS01125 SM00478 endonuclease III RK98_RS01195 SM00226 Low molecular weight phosphatase family RK98_RS01210 SM00421 helix_turn_helix, Lux Regulon RK98_RS01210 SM00448 cheY-homologous receiver domain RK98_RS01215 SM00387 Histidine kinase-like ATPases RK98_RS01280 SM00479 RK98_RS01280 RK98_RS01300 SM00046 Diacylglycerol kinase catalytic domain (presumed) RK98_RS01310 SM00845 GatB domain RK98_RS01335 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RK98_RS01335 SM00292 breast cancer carboxy-terminal domain RK98_RS01335 SM00532 Ligase N family RK98_RS01355 SM00998 Adenylosuccinate lyase C-terminus RK98_RS01415 SM00710 Parallel beta-helix repeats RK98_RS01425 SM01131 RK98_RS01425 RK98_RS01490 SM00382 ATPases associated with a variety of cellular activities RK98_RS01500 SM00382 ATPases associated with a variety of cellular activities RK98_RS01505 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK98_RS01560 SM00287 Bacterial SH3 domain homologues RK98_RS01645 SM00635 Bacterial Ig-like domain 2 RK98_RS01705 SM00507 HNH nucleases RK98_RS01855 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS01860 SM00910 RK98_RS01860 RK98_RS01985 SM00942 Primase C terminal 1 (PriCT-1) RK98_RS02005 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS02015 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS02035 SM00316 Ribosomal protein S1-like RNA-binding domain RK98_RS02035 SM00357 Cold shock protein domain RK98_RS02035 SM00955 RK98_RS02035 RK98_RS02055 SM01192 RK98_RS02055 RK98_RS02055 SM01193 RK98_RS02055 RK98_RS02075 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RK98_RS02140 SM00028 Tetratricopeptide repeats RK98_RS02165 SM00487 DEAD-like helicases superfamily RK98_RS02165 SM00490 helicase superfamily c-terminal domain RK98_RS02180 SM00257 Lysin motif RK98_RS02200 SM00957 SecA DEAD-like domain RK98_RS02200 SM00958 SecA preprotein cross-linking domain RK98_RS02215 SM00487 DEAD-like helicases superfamily RK98_RS02215 SM00490 helicase superfamily c-terminal domain RK98_RS02235 SM00267 diguanylate cyclase RK98_RS02290 SM00382 ATPases associated with a variety of cellular activities RK98_RS02355 SM00046 Diacylglycerol kinase catalytic domain (presumed) RK98_RS02385 SM00382 ATPases associated with a variety of cellular activities RK98_RS02390 SM00341 Helicase and RNase D C-terminal RK98_RS02390 SM00487 DEAD-like helicases superfamily RK98_RS02390 SM00490 helicase superfamily c-terminal domain RK98_RS02390 SM00956 RK98_RS02390 RK98_RS02395 SM00382 ATPases associated with a variety of cellular activities RK98_RS02405 SM00797 Allophanate hydrolase subunit 2 RK98_RS02410 SM00796 Allophanate hydrolase subunit 1 RK98_RS02465 SM00448 cheY-homologous receiver domain RK98_RS02465 SM00862 Transcriptional regulatory protein, C terminal RK98_RS02470 SM00387 Histidine kinase-like ATPases RK98_RS02470 SM00388 His Kinase A (phosphoacceptor) domain RK98_RS02485 SM01091 Transporter associated domain RK98_RS02505 SM00420 helix_turn_helix, Deoxyribose operon repressor RK98_RS02505 SM01134 RK98_RS02505 RK98_RS02560 SM00833 Cobalamin synthesis protein cobW C-terminal domain RK98_RS02565 SM00347 helix_turn_helix multiple antibiotic resistance protein RK98_RS02570 SM00382 ATPases associated with a variety of cellular activities RK98_RS02575 SM00382 ATPases associated with a variety of cellular activities RK98_RS02665 SM00342 helix_turn_helix, arabinose operon control protein RK98_RS02675 SM00257 Lysin motif RK98_RS02695 SM00382 ATPases associated with a variety of cellular activities RK98_RS02700 SM00387 Histidine kinase-like ATPases RK98_RS02705 SM00448 cheY-homologous receiver domain RK98_RS02705 SM00862 Transcriptional regulatory protein, C terminal RK98_RS02750 SM01120 RK98_RS02750 RK98_RS02770 SM00382 ATPases associated with a variety of cellular activities RK98_RS02790 SM00382 ATPases associated with a variety of cellular activities RK98_RS02820 SM00382 ATPases associated with a variety of cellular activities RK98_RS02835 SM00529 Helix-turn-helix diphteria tox regulatory element RK98_RS02835 SM00899 RK98_RS02835 RK98_RS02840 SM00382 ATPases associated with a variety of cellular activities RK98_RS02965 SM00478 endonuclease III RK98_RS02970 SM00836 DALR anticodon binding domain RK98_RS02970 SM01016 Arginyl tRNA synthetase N terminal dom RK98_RS02985 SM00829 Enoylreductase RK98_RS02995 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK98_RS03120 SM00986 Uracil DNA glycosylase superfamily RK98_RS03120 SM00987 UreE urease accessory protein, C-terminal domain RK98_RS03175 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RK98_RS03295 SM00838 Elongation factor G C-terminus RK98_RS03295 SM00889 Elongation factor G, domain IV RK98_RS03315 SM00663 RNA polymerase I subunit A N-terminus RK98_RS03350 SM00649 Ribosomal protein L11/L12 RK98_RS03355 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RK98_RS03355 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RK98_RS03380 SM00967 RNA 2'-O ribose methyltransferase substrate binding RK98_RS03385 SM00535 Ribonuclease III family RK98_RS03390 SM00840 RK98_RS03390 RK98_RS03410 SM00670 Large family of predicted nucleotide-binding domains RK98_RS03415 SM00382 ATPases associated with a variety of cellular activities RK98_RS03420 SM00382 ATPases associated with a variety of cellular activities RK98_RS03420 SM01086 C-terminal, D2-small domain, of ClpB protein RK98_RS03455 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK98_RS03540 SM00905 Dihydroneopterin aldolase RK98_RS03560 SM00382 ATPases associated with a variety of cellular activities RK98_RS03570 SM00977 TilS substrate C-terminal domain RK98_RS03575 SM00316 Ribosomal protein S1-like RNA-binding domain RK98_RS03585 SM00363 S4 RNA-binding domain RK98_RS03600 SM00487 DEAD-like helicases superfamily RK98_RS03600 SM00490 helicase superfamily c-terminal domain RK98_RS03600 SM00982 RK98_RS03600 RK98_RS03600 SM01058 CarD-like/TRCF domain RK98_RS03620 SM01400 RK98_RS03620 RK98_RS03660 SM00650 Ribosomal RNA adenine dimethylases RK98_RS03665 SM00493 RK98_RS03665 RK98_RS03685 SM00465 GIY-YIG type nucleases (URI domain) RK98_RS03750 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RK98_RS03750 SM00493 RK98_RS03750 RK98_RS03760 SM00382 ATPases associated with a variety of cellular activities RK98_RS03780 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK98_RS03780 SM00866 RK98_RS03780 RK98_RS03785 SM00642 Alpha-amylase domain RK98_RS03840 SM00257 Lysin motif RK98_RS03855 SM00382 ATPases associated with a variety of cellular activities RK98_RS03855 SM00930 RK98_RS03855 RK98_RS03880 SM00014 Acid phosphatase homologues RK98_RS03925 SM00833 Cobalamin synthesis protein cobW C-terminal domain RK98_RS04150 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS04215 SM00889 Elongation factor G, domain IV RK98_RS04225 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS04265 SM00116 Domain in cystathionine beta-synthase and other proteins. RK98_RS04265 SM01240 RK98_RS04265 RK98_RS04345 SM00855 Phosphoglycerate mutase family RK98_RS04430 SM00470 ParB-like nuclease domain RK98_RS04480 SM00382 ATPases associated with a variety of cellular activities RK98_RS04490 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS04575 SM00347 helix_turn_helix multiple antibiotic resistance protein RK98_RS04620 SM00506 Appr-1"-p processing enzyme RK98_RS04675 SM01130 RK98_RS04675 RK98_RS04710 SM00382 ATPases associated with a variety of cellular activities RK98_RS04875 SM00382 ATPases associated with a variety of cellular activities RK98_RS04905 SM00354 helix_turn _helix lactose operon repressor RK98_RS04955 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK98_RS04955 SM00866 RK98_RS04955 RK98_RS04970 SM00448 cheY-homologous receiver domain RK98_RS04970 SM00850 LytTr DNA-binding domain RK98_RS04975 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RK98_RS04975 SM00387 Histidine kinase-like ATPases RK98_RS05025 SM00829 Enoylreductase RK98_RS05035 SM00829 Enoylreductase RK98_RS05120 SM00882 Coenzyme A transferase RK98_RS05185 SM00342 helix_turn_helix, arabinose operon control protein RK98_RS05185 SM00448 cheY-homologous receiver domain RK98_RS05230 SM00382 ATPases associated with a variety of cellular activities RK98_RS05270 SM00382 ATPases associated with a variety of cellular activities RK98_RS05275 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS05280 SM00382 ATPases associated with a variety of cellular activities RK98_RS05305 SM00382 ATPases associated with a variety of cellular activities RK98_RS05320 SM00487 DEAD-like helicases superfamily RK98_RS05380 SM00859 Semialdehyde dehydrogenase, NAD binding domain RK98_RS05440 SM00382 ATPases associated with a variety of cellular activities RK98_RS05480 SM00984 UDP binding domain RK98_RS05560 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS05580 SM00062 Bacterial periplasmic substrate-binding proteins RK98_RS05585 SM00382 ATPases associated with a variety of cellular activities RK98_RS05605 SM01133 RK98_RS05605 RK98_RS05625 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK98_RS05670 SM00822 RK98_RS05670 RK98_RS05685 SM00470 ParB-like nuclease domain RK98_RS05745 SM00347 helix_turn_helix multiple antibiotic resistance protein RK98_RS05755 SM00257 Lysin motif RK98_RS05800 SM00342 helix_turn_helix, arabinose operon control protein RK98_RS05830 SM00148 Phospholipase C, catalytic domain (part); domain X RK98_RS05880 SM00450 Rhodanese Homology Domain RK98_RS05880 SM00849 Metallo-beta-lactamase superfamily RK98_RS05885 SM00450 Rhodanese Homology Domain RK98_RS05975 SM00448 cheY-homologous receiver domain RK98_RS05975 SM00862 Transcriptional regulatory protein, C terminal RK98_RS06005 SM00857 Resolvase, N terminal domain RK98_RS06010 SM00857 Resolvase, N terminal domain RK98_RS06055 SM00650 Ribosomal RNA adenine dimethylases RK98_RS06085 SM00450 Rhodanese Homology Domain RK98_RS06090 SM00849 Metallo-beta-lactamase superfamily RK98_RS06095 SM00450 Rhodanese Homology Domain RK98_RS06200 SM00849 Metallo-beta-lactamase superfamily RK98_RS06215 SM00091 PAS domain RK98_RS06215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RK98_RS06215 SM00387 Histidine kinase-like ATPases RK98_RS06215 SM00388 His Kinase A (phosphoacceptor) domain RK98_RS06220 SM00448 cheY-homologous receiver domain RK98_RS06220 SM00862 Transcriptional regulatory protein, C terminal RK98_RS06235 SM00788 Adenylosuccinate synthetase RK98_RS06255 SM00267 diguanylate cyclase RK98_RS06300 SM00434 DNA Topoisomerase IV RK98_RS06305 SM00387 Histidine kinase-like ATPases RK98_RS06305 SM00433 TopoisomeraseII RK98_RS06320 SM00480 DNA polymerase III beta subunit RK98_RS06325 SM00382 ATPases associated with a variety of cellular activities RK98_RS06325 SM00760 Bacterial dnaA protein helix-turn-helix domain RK98_RS06345 SM01228 RK98_RS06345 RK98_RS06355 SM00470 ParB-like nuclease domain RK98_RS06375 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS06380 SM00357 Cold shock protein domain RK98_RS06395 SM00382 ATPases associated with a variety of cellular activities RK98_RS06450 SM00450 Rhodanese Homology Domain RK98_RS06460 SM00867 YceI-like domain RK98_RS06475 SM00382 ATPases associated with a variety of cellular activities RK98_RS06605 SM00903 Flavin reductase like domain RK98_RS06625 SM00903 Flavin reductase like domain RK98_RS06655 SM00957 SecA DEAD-like domain RK98_RS06655 SM00958 SecA preprotein cross-linking domain RK98_RS06680 SM00047 Lysozyme subfamily 2 RK98_RS06765 SM00347 helix_turn_helix multiple antibiotic resistance protein RK98_RS06775 SM00098 Alkaline phosphatase homologues RK98_RS06785 SM00448 cheY-homologous receiver domain RK98_RS06785 SM00862 Transcriptional regulatory protein, C terminal RK98_RS06790 SM00387 Histidine kinase-like ATPases RK98_RS06795 SM00382 ATPases associated with a variety of cellular activities RK98_RS06985 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain RK98_RS07190 SM01266 RK98_RS07190 RK98_RS07215 SM00899 RK98_RS07215 RK98_RS07230 SM00382 ATPases associated with a variety of cellular activities RK98_RS07230 SM01086 C-terminal, D2-small domain, of ClpB protein RK98_RS07350 SM00382 ATPases associated with a variety of cellular activities RK98_RS07380 SM00347 helix_turn_helix multiple antibiotic resistance protein RK98_RS07410 SM00382 ATPases associated with a variety of cellular activities RK98_RS07450 SM00954 Region found in RelA / SpoT proteins RK98_RS07455 SM00422 helix_turn_helix, mercury resistance RK98_RS07460 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK98_RS07460 SM00895 RK98_RS07460 RK98_RS07515 SM01208 RK98_RS07515 RK98_RS07665 SM00849 Metallo-beta-lactamase superfamily RK98_RS07700 SM00382 ATPases associated with a variety of cellular activities RK98_RS07705 SM00382 ATPases associated with a variety of cellular activities RK98_RS07750 SM00382 ATPases associated with a variety of cellular activities RK98_RS07795 SM00116 Domain in cystathionine beta-synthase and other proteins. RK98_RS07795 SM00382 ATPases associated with a variety of cellular activities RK98_RS07875 SM00871 Bacterial transcription activator, effector binding domain RK98_RS07910 SM00382 ATPases associated with a variety of cellular activities RK98_RS07915 SM00382 ATPases associated with a variety of cellular activities RK98_RS07940 SM00729 Elongator protein 3, MiaB family, Radical SAM RK98_RS07940 SM00876 Biotin and Thiamin Synthesis associated domain RK98_RS08000 SM00855 Phosphoglycerate mutase family RK98_RS08020 SM00062 Bacterial periplasmic substrate-binding proteins RK98_RS08020 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RK98_RS08030 SM00382 ATPases associated with a variety of cellular activities RK98_RS08115 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RK98_RS08140 SM00387 Histidine kinase-like ATPases RK98_RS08145 SM00421 helix_turn_helix, Lux Regulon RK98_RS08145 SM00448 cheY-homologous receiver domain RK98_RS08150 SM00422 helix_turn_helix, mercury resistance RK98_RS08170 SM00347 helix_turn_helix multiple antibiotic resistance protein RK98_RS08195 SM00342 helix_turn_helix, arabinose operon control protein RK98_RS08260 SM00829 Enoylreductase RK98_RS08295 SM00850 LytTr DNA-binding domain RK98_RS08300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RK98_RS08300 SM00387 Histidine kinase-like ATPases RK98_RS08300 SM00388 His Kinase A (phosphoacceptor) domain RK98_RS08305 SM00448 cheY-homologous receiver domain RK98_RS08305 SM00862 Transcriptional regulatory protein, C terminal RK98_RS08315 SM00382 ATPases associated with a variety of cellular activities RK98_RS08325 SM00347 helix_turn_helix multiple antibiotic resistance protein RK98_RS08420 SM00382 ATPases associated with a variety of cellular activities RK98_RS08570 SM00420 helix_turn_helix, Deoxyribose operon repressor RK98_RS08585 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RK98_RS08585 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RK98_RS08600 SM00047 Lysozyme subfamily 2 RK98_RS08650 SM00342 helix_turn_helix, arabinose operon control protein RK98_RS08690 SM00988 UreE urease accessory protein, N-terminal domain RK98_RS08755 SM00382 ATPases associated with a variety of cellular activities RK98_RS08765 SM00852 Probable molybdopterin binding domain RK98_RS08775 SM00852 Probable molybdopterin binding domain RK98_RS08800 SM00729 Elongator protein 3, MiaB family, Radical SAM RK98_RS08830 SM00347 helix_turn_helix multiple antibiotic resistance protein RK98_RS08895 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RK98_RS08895 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RK98_RS08895 SM00493 RK98_RS08895 RK98_RS08910 SM01403 RK98_RS08910 RK98_RS08930 SM01382 RK98_RS08930 RK98_RS08930 SM01383 RK98_RS08930 RK98_RS08945 SM00322 K homology RNA-binding domain RK98_RS08965 SM01374 RK98_RS08965 RK98_RS08970 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RK98_RS09025 SM00316 Ribosomal protein S1-like RNA-binding domain RK98_RS09045 SM00662 RNA polymerases D RK98_RS09055 SM00382 ATPases associated with a variety of cellular activities RK98_RS09060 SM00382 ATPases associated with a variety of cellular activities RK98_RS09165 SM00422 helix_turn_helix, mercury resistance RK98_RS09190 SM00420 helix_turn_helix, Deoxyribose operon repressor RK98_RS09190 SM01134 RK98_RS09190 RK98_RS09210 SM01133 RK98_RS09210 RK98_RS09235 SM00829 Enoylreductase RK98_RS09240 SM00829 Enoylreductase RK98_RS09450 SM00382 ATPases associated with a variety of cellular activities RK98_RS09490 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RK98_RS09530 SM01133 RK98_RS09530 RK98_RS09540 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain RK98_RS09615 SM00357 Cold shock protein domain RK98_RS09615 SM00382 ATPases associated with a variety of cellular activities RK98_RS09615 SM00959 Rho termination factor, N-terminal domain RK98_RS09635 SM00937 RK98_RS09635 RK98_RS09650 SM00226 Low molecular weight phosphatase family RK98_RS09710 SM00382 ATPases associated with a variety of cellular activities RK98_RS09795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK98_RS09800 SM00155 Phospholipase D. Active site motifs. RK98_RS09835 SM00487 DEAD-like helicases superfamily RK98_RS09835 SM00490 helicase superfamily c-terminal domain RK98_RS09850 SM00448 cheY-homologous receiver domain RK98_RS09850 SM00862 Transcriptional regulatory protein, C terminal RK98_RS09855 SM00387 Histidine kinase-like ATPases RK98_RS09855 SM00388 His Kinase A (phosphoacceptor) domain RK98_RS09900 SM01005 Alanine racemase, C-terminal domain RK98_RS09920 SM00331 Sigma factor PP2C-like phosphatases RK98_RS09920 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain RK98_RS09940 SM00316 Ribosomal protein S1-like RNA-binding domain RK98_RS09940 SM00732 Likely ribonuclease with RNase H fold. RK98_RS09945 SM00731 SprT homologues. RK98_RS09995 SM01329 RK98_RS09995 RK98_RS10000 SM00917 LeuA allosteric (dimerisation) domain RK98_RS10050 SM00534 ATPase domain of DNA mismatch repair MUTS family RK98_RS10060 SM00382 ATPases associated with a variety of cellular activities RK98_RS10065 SM00881 CoA binding domain RK98_RS10085 SM00354 helix_turn _helix lactose operon repressor RK98_RS10090 SM00640 Glycosyl hydrolases family 32 RK98_RS10105 SM00448 cheY-homologous receiver domain RK98_RS10105 SM00850 LytTr DNA-binding domain RK98_RS10115 SM00794 Staphylococcal AgrD protein RK98_RS10120 SM00793 Accessory gene regulator B RK98_RS10150 SM00883 Chaperonin 10 Kd subunit RK98_RS10165 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS10170 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS10195 SM00942 Primase C terminal 1 (PriCT-1) RK98_RS10325 SM00318 Staphylococcal nuclease homologues RK98_RS10330 SM00357 Cold shock protein domain RK98_RS10370 SM00855 Phosphoglycerate mutase family RK98_RS10430 SM00493 RK98_RS10430 RK98_RS10440 SM00382 ATPases associated with a variety of cellular activities RK98_RS10440 SM00930 RK98_RS10440 RK98_RS10465 SM00382 ATPases associated with a variety of cellular activities RK98_RS10510 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS10515 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS10530 SM01040 BRO family, N-terminal domain RK98_RS10585 SM00507 HNH nucleases RK98_RS10810 SM00047 Lysozyme subfamily 2 RK98_RS10830 SM00287 Bacterial SH3 domain homologues RK98_RS10830 SM00644 RK98_RS10830 RK98_RS10905 SM00729 Elongator protein 3, MiaB family, Radical SAM RK98_RS11060 SM01298 RK98_RS11060 RK98_RS11070 SM00316 Ribosomal protein S1-like RNA-binding domain RK98_RS11085 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RK98_RS11165 SM00382 ATPases associated with a variety of cellular activities RK98_RS11165 SM01086 C-terminal, D2-small domain, of ClpB protein RK98_RS11210 SM00825 Beta-ketoacyl synthase RK98_RS11230 SM00382 ATPases associated with a variety of cellular activities RK98_RS11235 SM00382 ATPases associated with a variety of cellular activities RK98_RS11250 SM00382 ATPases associated with a variety of cellular activities RK98_RS11255 SM00382 ATPases associated with a variety of cellular activities RK98_RS11305 SM01118 RK98_RS11305 RK98_RS11315 SM00954 Region found in RelA / SpoT proteins RK98_RS11330 SM00116 Domain in cystathionine beta-synthase and other proteins. RK98_RS11330 SM00924 MgtE intracellular N domain RK98_RS11395 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RK98_RS11425 SM00914 RK98_RS11425 RK98_RS11470 SM00382 ATPases associated with a variety of cellular activities RK98_RS11565 SM00347 helix_turn_helix multiple antibiotic resistance protein RK98_RS11575 SM00047 Lysozyme subfamily 2 RK98_RS11575 SM00644 RK98_RS11575 RK98_RS11635 SM01001 AIR carboxylase RK98_RS11655 SM01211 RK98_RS11655 RK98_RS11680 SM00798 AICARFT/IMPCHase bienzyme RK98_RS11680 SM00851 MGS-like domain RK98_RS11685 SM01209 RK98_RS11685 RK98_RS11685 SM01210 RK98_RS11685 RK98_RS11695 SM00382 ATPases associated with a variety of cellular activities RK98_RS11765 SM00849 Metallo-beta-lactamase superfamily RK98_RS11795 SM00861 Transketolase, pyrimidine binding domain RK98_RS11815 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS11820 SM00382 ATPases associated with a variety of cellular activities RK98_RS11870 SM00838 Elongation factor G C-terminus RK98_RS11895 SM00878 Biotin carboxylase C-terminal domain RK98_RS11975 SM00725 NEAr Transporter domain RK98_RS11980 SM00725 NEAr Transporter domain RK98_RS11985 SM00725 NEAr Transporter domain RK98_RS12020 SM00967 RNA 2'-O ribose methyltransferase substrate binding RK98_RS12030 SM00873 B3/4 domain RK98_RS12030 SM00874 tRNA synthetase B5 domain RK98_RS12030 SM00896 Ferredoxin-fold anticodon binding domain RK98_RS12065 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RK98_RS12065 SM00481 DNA polymerase alpha chain like domain RK98_RS12065 SM00483 DNA polymerase X family RK98_RS12070 SM00463 Small MutS-related domain RK98_RS12070 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RK98_RS12070 SM00534 ATPase domain of DNA mismatch repair MUTS family RK98_RS12085 SM00465 GIY-YIG type nucleases (URI domain) RK98_RS12295 SM00740 RK98_RS12295 RK98_RS12315 SM00842 Cell division protein FtsA RK98_RS12320 SM00864 Tubulin/FtsZ family, GTPase domain RK98_RS12320 SM00865 Tubulin/FtsZ family, C-terminal domain RK98_RS12345 SM00363 S4 RNA-binding domain RK98_RS12380 SM00363 S4 RNA-binding domain RK98_RS12405 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RK98_RS12410 SM00851 MGS-like domain RK98_RS12410 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RK98_RS12410 SM01209 RK98_RS12410 RK98_RS12415 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RK98_RS12440 SM00072 Guanylate kinase homologues. RK98_RS12445 SM01409 RK98_RS12445 RK98_RS12455 SM00487 DEAD-like helicases superfamily RK98_RS12455 SM00490 helicase superfamily c-terminal domain RK98_RS12490 SM00331 Sigma factor PP2C-like phosphatases RK98_RS12490 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain RK98_RS12495 SM00220 Serine/Threonine protein kinases, catalytic domain RK98_RS12495 SM00740 RK98_RS12495 RK98_RS12510 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain RK98_RS12525 SM01120 RK98_RS12525 RK98_RS12525 SM01121 RK98_RS12525 RK98_RS12530 SM00487 DEAD-like helicases superfamily RK98_RS12530 SM00490 helicase superfamily c-terminal domain RK98_RS12545 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RK98_RS12550 SM00822 RK98_RS12550 RK98_RS12565 SM00358 Double-stranded RNA binding motif RK98_RS12565 SM00535 Ribonuclease III family RK98_RS12570 SM00968 SMC proteins Flexible Hinge Domain RK98_RS12575 SM00382 ATPases associated with a variety of cellular activities RK98_RS12575 SM00962 SRP54-type protein, GTPase domain RK98_RS12575 SM00963 SRP54-type protein, helical bundle domain RK98_RS12585 SM00382 ATPases associated with a variety of cellular activities RK98_RS12585 SM00962 SRP54-type protein, GTPase domain RK98_RS12585 SM00963 SRP54-type protein, helical bundle domain RK98_RS12630 SM00881 CoA binding domain RK98_RS12635 SM00257 Lysin motif RK98_RS12650 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RK98_RS12650 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RK98_RS12650 SM00493 RK98_RS12650 RK98_RS12670 SM00382 ATPases associated with a variety of cellular activities RK98_RS12670 SM01086 C-terminal, D2-small domain, of ClpB protein RK98_RS12730 SM00479 RK98_RS12730 RK98_RS12730 SM00481 DNA polymerase alpha chain like domain RK98_RS12745 SM00316 Ribosomal protein S1-like RNA-binding domain RK98_RS12745 SM00322 K homology RNA-binding domain RK98_RS12775 SM00904 Riboflavin kinase RK98_RS12780 SM01387 RK98_RS12780 RK98_RS12785 SM00316 Ribosomal protein S1-like RNA-binding domain RK98_RS12785 SM00322 K homology RNA-binding domain RK98_RS12795 SM00849 Metallo-beta-lactamase superfamily RK98_RS12800 SM00382 ATPases associated with a variety of cellular activities RK98_RS12800 SM00843 RK98_RS12800 RK98_RS12805 SM00866 RK98_RS12805 RK98_RS12830 SM00530 Helix-turn-helix XRE-family like proteins RK98_RS12840 SM00852 Probable molybdopterin binding domain RK98_RS12845 SM00382 ATPases associated with a variety of cellular activities RK98_RS12850 SM00322 K homology RNA-binding domain RK98_RS12850 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK98_RS12880 SM00729 Elongator protein 3, MiaB family, Radical SAM RK98_RS12895 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RK98_RS12895 SM00534 ATPase domain of DNA mismatch repair MUTS family RK98_RS12900 SM00853 MutL C terminal dimerisation domain RK98_RS12900 SM01340 RK98_RS12900 RK98_RS12955 SM00422 helix_turn_helix, mercury resistance RK98_RS12960 SM01230 RK98_RS12960 RK98_RS13035 SM00155 Phospholipase D. Active site motifs. RK98_RS13055 SM00421 helix_turn_helix, Lux Regulon RK98_RS13055 SM00448 cheY-homologous receiver domain RK98_RS13065 SM00318 Staphylococcal nuclease homologues RK98_RS13120 SM01060 RK98_RS13120 RK98_RS13135 SM01240 RK98_RS13135 RK98_RS13165 SM00861 Transketolase, pyrimidine binding domain RK98_RS13235 SM01207 RK98_RS13235 RK98_RS13240 SM00387 Histidine kinase-like ATPases RK98_RS13240 SM00433 TopoisomeraseII RK98_RS13245 SM00434 DNA Topoisomerase IV RK98_RS13260 SM01061 CAT RNA binding domain RK98_RS13370 SM00382 ATPases associated with a variety of cellular activities RK98_RS13375 SM00382 ATPases associated with a variety of cellular activities RK98_RS13410 SM00382 ATPases associated with a variety of cellular activities RK98_RS13440 SM00382 ATPases associated with a variety of cellular activities RK98_RS13455 SM00859 Semialdehyde dehydrogenase, NAD binding domain RK98_RS13460 SM01130 RK98_RS13460 RK98_RS13480 SM01005 Alanine racemase, C-terminal domain RK98_RS13495 SM00357 Cold shock protein domain RK98_RS13530 SM00327 von Willebrand factor (vWF) type A domain RK98_RS13555 SM00861 Transketolase, pyrimidine binding domain RK98_RS13560 SM00387 Histidine kinase-like ATPases RK98_RS13560 SM00388 His Kinase A (phosphoacceptor) domain RK98_RS13565 SM00448 cheY-homologous receiver domain RK98_RS13565 SM00862 Transcriptional regulatory protein, C terminal RK98_RS13580 SM00014 Acid phosphatase homologues RK98_RS13595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RK98_RS13595 SM00245 tail specific protease RK98_RS13640 SM00567 E-Z type HEAT repeats RK98_RS13640 SM00932 Scaffold protein Nfu/NifU N terminal RK98_RS13645 SM00932 Scaffold protein Nfu/NifU N terminal RK98_RS13690 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RK98_RS13690 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RK98_RS13695 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RK98_RS13695 SM00475 5'-3' exonuclease RK98_RS13715 SM00981 RK98_RS13715 RK98_RS13765 SM00478 endonuclease III RK98_RS13765 SM00525 RK98_RS13765 RK98_RS13780 SM00479 RK98_RS13780 RK98_RS13780 SM00491 RK98_RS13780 RK98_RS13815 SM00914 RK98_RS13815 RK98_RS13820 SM00028 Tetratricopeptide repeats RK98_RS13845 SM00562 RK98_RS13845 RK98_RS13870 SM00411 bacterial (prokaryotic) histone like domain RK98_RS13885 SM00316 Ribosomal protein S1-like RNA-binding domain RK98_RS13910 SM00870 RK98_RS13910 RK98_RS13925 SM00257 Lysin motif RK98_RS13930 SM00487 DEAD-like helicases superfamily RK98_RS13930 SM00490 helicase superfamily c-terminal domain RK98_RS13980 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RK98_RS13980 SM00387 Histidine kinase-like ATPases RK98_RS13980 SM00388 His Kinase A (phosphoacceptor) domain RK98_RS13985 SM00448 cheY-homologous receiver domain RK98_RS13985 SM00862 Transcriptional regulatory protein, C terminal RK98_RS13990 SM00363 S4 RNA-binding domain RK98_RS14055 SM00342 helix_turn_helix, arabinose operon control protein RK98_RS14055 SM00871 Bacterial transcription activator, effector binding domain RK98_RS14060 SM00642 Alpha-amylase domain RK98_RS14065 SM00354 helix_turn _helix lactose operon repressor RK98_RS14085 SM01350 RK98_RS14085 RK98_RS14115 SM00861 Transketolase, pyrimidine binding domain RK98_RS14165 SM00878 Biotin carboxylase C-terminal domain RK98_RS14175 SM00841 Elongation factor P, C-terminal RK98_RS14175 SM01185 RK98_RS14175 RK98_RS14200 SM00450 Rhodanese Homology Domain RK98_RS14260 SM00849 Metallo-beta-lactamase superfamily RK98_RS14315 SM00382 ATPases associated with a variety of cellular activities RK98_RS14320 SM00518 AP endonuclease family 2 RK98_RS14325 SM00487 DEAD-like helicases superfamily RK98_RS14325 SM00490 helicase superfamily c-terminal domain RK98_RS14345 SM00400 zinc finger RK98_RS14345 SM00493 RK98_RS14345 RK98_RS14355 SM00116 Domain in cystathionine beta-synthase and other proteins. RK98_RS14415 SM00729 Elongator protein 3, MiaB family, Radical SAM RK98_RS14430 SM00271 DnaJ molecular chaperone homology domain RK98_RS14450 SM00729 Elongator protein 3, MiaB family, Radical SAM RK98_RS14455 SM00838 Elongation factor G C-terminus RK98_RS14470 SM00849 Metallo-beta-lactamase superfamily RK98_RS14480 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RK98_RS14495 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK98_RS14505 SM01103 RK98_RS14505 RK98_RS14560 SM00878 Biotin carboxylase C-terminal domain RK98_RS14570 SM00797 Allophanate hydrolase subunit 2 RK98_RS14575 SM00796 Allophanate hydrolase subunit 1 RK98_RS14610 SM00732 Likely ribonuclease with RNase H fold. RK98_RS14620 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RK98_RS14625 SM00382 ATPases associated with a variety of cellular activities RK98_RS14630 SM00028 Tetratricopeptide repeats RK98_RS14675 SM00382 ATPases associated with a variety of cellular activities RK98_RS14705 SM00287 Bacterial SH3 domain homologues RK98_RS14705 SM00646 RK98_RS14705 RK98_RS14715 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK98_RS14715 SM00954 Region found in RelA / SpoT proteins RK98_RS14735 SM01323 RK98_RS14735 RK98_RS14750 SM00382 ATPases associated with a variety of cellular activities RK98_RS14755 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RK98_RS14830 SM00650 Ribosomal RNA adenine dimethylases RK98_RS14900 SM01004 Delta-aminolevulinic acid dehydratase RK98_RS14930 SM00382 ATPases associated with a variety of cellular activities RK98_RS14930 SM00994 ClpX C4-type zinc finger RK98_RS14930 SM01086 C-terminal, D2-small domain, of ClpB protein RK98_RS14980 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RK98_RS15005 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RK98_RS15015 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RK98_RS15015 SM01232 RK98_RS15015 RK98_RS15020 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RK98_RS15020 SM00474 3'-5' exonuclease RK98_RS15020 SM00475 5'-3' exonuclease RK98_RS15020 SM00482 DNA polymerase A domain RK98_RS15030 SM00387 Histidine kinase-like ATPases RK98_RS15030 SM00388 His Kinase A (phosphoacceptor) domain RK98_RS15035 SM00448 cheY-homologous receiver domain RK98_RS15035 SM00862 Transcriptional regulatory protein, C terminal RK98_RS15045 SM01329 RK98_RS15045 RK98_RS15080 SM00530 Helix-turn-helix XRE-family like proteins